Psyllid ID: psy8912
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | 2.2.26 [Sep-21-2011] | |||||||
| Q86V88 | 176 | Magnesium-dependent phosp | yes | N/A | 0.252 | 0.772 | 0.528 | 4e-33 | |
| Q9D967 | 164 | Magnesium-dependent phosp | yes | N/A | 0.256 | 0.841 | 0.535 | 9e-33 | |
| O94279 | 172 | Putative magnesium-depend | no | N/A | 0.245 | 0.767 | 0.417 | 3e-22 | |
| P40081 | 178 | Putative magnesium-depend | yes | N/A | 0.245 | 0.741 | 0.286 | 1e-06 |
| >sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats.
Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLVAP--FKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V V P K V D +G ++ Y VPE+L+ L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLG 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
AAASRTSEI A Q+L L +L +YF ++EIYPG K THFE L++ TGI + M+FFD
Sbjct: 63 VPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFD 122
Query: 132 DEERNSHDVSPLGVTCIH 149
DE RN DVS LGVTCIH
Sbjct: 123 DERRNIVDVSKLGVTCIH 140
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8 |
| >sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (357), Expect = 9e-33, Method: Composition-based stats.
Identities = 75/140 (53%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 12 VKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKE 69
+ + PK+ VFDLDYTLWP V V PF K V D +G I+ Y VPE+L L+
Sbjct: 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS 60
Query: 70 NKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVF 129
VAAASRTSEI A Q+L L +L +YF +EIYPG K THFE L TG+ + MVF
Sbjct: 61 LGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVF 120
Query: 130 FDDEERNSHDVSPLGVTCIH 149
FDDE RN DV LGVTCIH
Sbjct: 121 FDDENRNIIDVGRLGVTCIH 140
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
| >sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.31 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 14/146 (9%)
Query: 14 KFPKMVVFDLDYTLWPLHVHD-LVAPFKKIGQK---VMDAKGTLIKYYRGVPEILRYLKE 69
+FPK VVFDLDYTLWPL + + APFK ++D GT I +Y + IL+ L+
Sbjct: 6 EFPKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRN 65
Query: 70 NKCLVAAASRTSEILHAKQILNLINLN---------QYFSNKEIYPGQKTTHFESLKKAT 120
K + ASRT +AKQ LNL+ + ++F+ + +PG K HF+ + +
Sbjct: 66 QKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNES 125
Query: 121 GIEYKDMVFFDDEERNSHDVSPLGVT 146
GI+Y++MVFFDDE RN +V LGVT
Sbjct: 126 GIDYREMVFFDDESRN-REVERLGVT 150
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
| >sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 15 FPKMVVFDLDYTLWPL----HVHDLVAPFKKIGQKVMDA---KGTLIKYYRGVPEILRYL 67
+P + FDLDYT+WP H+H P K +V+ G + Y+ +P IL L
Sbjct: 4 YPDVAAFDLDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYELTIYKDIPRILGDL 63
Query: 68 KENKCLVAAASRTSEILHAKQIL---------------NLINLNQYFSNKEIYPGQKTTH 112
K+N + ASRT A++IL NL + Q+ +I G
Sbjct: 64 KDNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWGERSKI--GHLRDG 121
Query: 113 FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149
+ L + ++ K + FDDE RN +V GV ++
Sbjct: 122 LKDLYNTSDLKSKKICLFDDESRNK-EVEKYGVKFVY 157
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | ||||||
| 350406224 | 159 | PREDICTED: magnesium-dependent phosphata | 0.247 | 0.836 | 0.574 | 1e-37 | |
| 340716330 | 147 | PREDICTED: magnesium-dependent phosphata | 0.247 | 0.904 | 0.567 | 2e-37 | |
| 383855172 | 155 | PREDICTED: magnesium-dependent phosphata | 0.245 | 0.851 | 0.582 | 2e-35 | |
| 156555324 | 162 | PREDICTED: magnesium-dependent phosphata | 0.252 | 0.839 | 0.528 | 8e-33 | |
| 417396395 | 164 | Hypothetical protein [Desmodus rotundus] | 0.256 | 0.841 | 0.514 | 3e-32 | |
| 443698977 | 166 | hypothetical protein CAPTEDRAFT_148534 [ | 0.278 | 0.903 | 0.476 | 3e-32 | |
| 254839198 | 187 | Chain A, Crystal Structure Of Human Magn | 0.258 | 0.743 | 0.531 | 7e-32 | |
| 157823059 | 164 | magnesium-dependent phosphatase 1 [Rattu | 0.256 | 0.841 | 0.535 | 1e-31 | |
| 345804214 | 164 | PREDICTED: magnesium-dependent phosphata | 0.252 | 0.829 | 0.514 | 1e-31 | |
| 442759349 | 161 | Putative acid phosphatase [Ixodes ricinu | 0.273 | 0.913 | 0.469 | 2e-31 |
| >gi|350406224|ref|XP_003487698.1| PREDICTED: magnesium-dependent phosphatase 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 16 PKMVVFDLDYTLWPLHVHD-LVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLV 74
PK+++FDLDYTLWP V ++ PFKK G V+D++G +I+YY+ VP++L++L E +
Sbjct: 8 PKIIIFDLDYTLWPFWVDTHVIPPFKKKGNDVVDSRGQIIQYYKEVPDVLKHLYEAGYEL 67
Query: 75 AAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134
ASRTSEI AKQ+LNL N ++Y KEIYPG K THF ++KA+GI+YKDMVFFDDE+
Sbjct: 68 GVASRTSEIQGAKQLLNLFNWDKYLKYKEIYPGCKVTHFSKIQKASGIDYKDMVFFDDED 127
Query: 135 RNSHDVSPLGVTCI 148
RN DV LGVTCI
Sbjct: 128 RNIVDVGKLGVTCI 141
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340716330|ref|XP_003396652.1| PREDICTED: magnesium-dependent phosphatase 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 16 PKMVVFDLDYTLWPLHVHD-LVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLV 74
PK+++FDLDYTLWP V ++ PFKK G V+D++G +I+YY+ VP++L++L E +
Sbjct: 8 PKIIIFDLDYTLWPFWVDTHVIPPFKKKGNNVVDSRGQIIQYYKEVPDVLKHLYEEGYEL 67
Query: 75 AAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134
ASRTSEI AKQ+LNL + ++Y KEIYPG K THF ++KA+GI+YKDMVFFDDE+
Sbjct: 68 GVASRTSEIQGAKQLLNLFDWDKYLKYKEIYPGCKVTHFSKIQKASGIDYKDMVFFDDED 127
Query: 135 RNSHDVSPLGVTCI 148
RN DV LGVTCI
Sbjct: 128 RNIVDVGKLGVTCI 141
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383855172|ref|XP_003703091.1| PREDICTED: magnesium-dependent phosphatase 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 96/134 (71%), Gaps = 2/134 (1%)
Query: 16 PKMVVFDLDYTLWPLHVHD-LVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLV 74
PK++VFDLDYTLWP V + PFKK G V+DA G +I+YY+ VP+IL+ L E L
Sbjct: 5 PKLLVFDLDYTLWPFWVDTHVTPPFKKKGNDVVDAHGQIIRYYKEVPDILKRLSEEYEL- 63
Query: 75 AAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134
ASRTSEI A Q+L L N ++YF KEIYPG K +HF ++KA+GI+YKDM+FFDDE
Sbjct: 64 GVASRTSEIQGANQLLKLFNWDKYFKYKEIYPGCKVSHFSKIQKASGIDYKDMIFFDDEH 123
Query: 135 RNSHDVSPLGVTCI 148
RN DV LGVTCI
Sbjct: 124 RNIVDVGKLGVTCI 137
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156555324|ref|XP_001603927.1| PREDICTED: magnesium-dependent phosphatase 1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query: 13 KKFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQ--KVMDAKGTLIKYYRGVPEILRYLKEN 70
+K PK+VVFDLDYTLWP V V P + GQ K++DA G ++YY PEI + L E
Sbjct: 3 EKKPKVVVFDLDYTLWPFWVDTHVTPPFRKGQNNKIVDAHGQTVRYYPHSPEIFKQLSEE 62
Query: 71 KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130
+ ASRTSEI A Q+L+L N+Y KEIYPG KTTHF +K A+G+EYKDM+FF
Sbjct: 63 GYEIGIASRTSEIRGANQLLDLFGWNKYIKYKEIYPGTKTTHFSKIKNASGVEYKDMIFF 122
Query: 131 DDEERNSHDVSPLGVTCI 148
DDE+RN D++ +GV I
Sbjct: 123 DDEQRNISDLTEVGVLSI 140
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|417396395|gb|JAA45231.1| Hypothetical protein [Desmodus rotundus] | Back alignment and taxonomy information |
|---|
Score = 146 bits (369), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 12 VKKFPKMVVFDLDYTLWPLHVHDLVAP--FKKIGQKVMDAKGTLIKYYRGVPEILRYLKE 69
+++ PK+ VFDLDYTLWP V V P K + V D +G I+ Y VPE+L +
Sbjct: 1 MERLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDRTVRDRRGQTIRLYPEVPEVLNRFRR 60
Query: 70 NKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVF 129
VAAASRT EI A Q+L L +L++YF +EIYPG K THFE L++ TG+ + M+F
Sbjct: 61 LGVPVAAASRTGEIEGANQLLELFDLDRYFVQREIYPGSKVTHFERLRQKTGVPFSQMLF 120
Query: 130 FDDEERNSHDVSPLGVTCIH 149
FDDE+RN DVS LGVTCIH
Sbjct: 121 FDDEKRNIVDVSKLGVTCIH 140
|
Source: Desmodus rotundus Species: Desmodus rotundus Genus: Desmodus Family: Phyllostomidae Order: Chiroptera Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|443698977|gb|ELT98686.1| hypothetical protein CAPTEDRAFT_148534 [Capitella teleta] | Back alignment and taxonomy information |
|---|
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 16 PKMVVFDLDYTLWPLHVHDLVAPFKKI-GQKVMDAKGTLIKYYRGVPEILRYLKENKCLV 74
PK +VFDLD T+WP H+ PF+K K++D G +K + VP+IL+ LK + ++
Sbjct: 10 PKFIVFDLDCTMWPWHLDMSDPPFRKARDGKIVDRLGHKVKGFPDVPQILKTLKSDGYII 69
Query: 75 AAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134
AASRT+E+ Q+L+L+ ++Y S +EIYPGQK THF++L+K+TGI +KDM+FFDDE
Sbjct: 70 GAASRTTELEAGHQLLDLLGWDEYISFREIYPGQKMTHFKALQKSTGIAFKDMLFFDDEY 129
Query: 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGI 165
RN DVS LGVTC + MS+ LK+ +
Sbjct: 130 RNIRDVSKLGVTCFYCQDGMSNEVLKKGFAL 160
|
Source: Capitella teleta Species: Capitella teleta Genus: Capitella Family: Capitellidae Order: Capitellida Class: Polychaeta Phylum: Annelida Superkingdom: Eukaryota |
| >gi|254839198|pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) | Back alignment and taxonomy information |
|---|
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query: 11 SVKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLK 68
S+ + PK+ VFDLDYTLWP V V PF K V D +G ++ Y VPE+L+ L+
Sbjct: 22 SMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQ 81
Query: 69 ENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMV 128
AAASRTSEI A Q+L L +L +YF ++EIYPG K THFE L++ TGI + M+
Sbjct: 82 SLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMI 141
Query: 129 FFDDEERNSHDVSPLGVTCIH 149
FFDDE RN DVS LGVTCIH
Sbjct: 142 FFDDERRNIVDVSKLGVTCIH 162
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|157823059|ref|NP_001099509.1| magnesium-dependent phosphatase 1 [Rattus norvegicus] gi|149063990|gb|EDM14260.1| similar to magnesium-dependent phosphatase-1 (predicted), isoform CRA_b [Rattus norvegicus] | Back alignment and taxonomy information |
|---|
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 12 VKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKE 69
+ + PK+ VFDLDYTLWP V V PF K V D +G I+ Y VPEIL L+
Sbjct: 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDIRLYPEVPEILGRLQS 60
Query: 70 NKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVF 129
VAAASRTSEI A Q+L L +L +YF +EIYPG K THFE L+ TG+ + M+F
Sbjct: 61 LGVPVAAASRTSEIEGANQLLELFDLGKYFIQREIYPGSKVTHFERLRNKTGVPFSQMIF 120
Query: 130 FDDEERNSHDVSPLGVTCIH 149
FDDE RN DV LGVTCIH
Sbjct: 121 FDDENRNIIDVGKLGVTCIH 140
|
Source: Rattus norvegicus Species: Rattus norvegicus Genus: Rattus Family: Muridae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|345804214|ref|XP_537388.3| PREDICTED: magnesium-dependent phosphatase 1-like [Canis lupus familiaris] | Back alignment and taxonomy information |
|---|
Score = 144 bits (362), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/138 (51%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V V PF + V D +G ++ Y VP++L+ L++
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHRSSDGAVRDRRGQAVRLYPEVPDVLQQLQDLD 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
VAAASRT EI A Q+L L L++YF ++EIYPG K THFE L++ TG+ + M+FFD
Sbjct: 63 VPVAAASRTGEIEGANQLLELFGLDRYFVHREIYPGSKVTHFERLQQKTGVGFSQMIFFD 122
Query: 132 DEERNSHDVSPLGVTCIH 149
DE+RN DVS LGVTCIH
Sbjct: 123 DEKRNIVDVSKLGVTCIH 140
|
Source: Canis lupus familiaris Species: Canis lupus Genus: Canis Family: Canidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|442759349|gb|JAA71833.1| Putative acid phosphatase [Ixodes ricinus] | Back alignment and taxonomy information |
|---|
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 2/149 (1%)
Query: 16 PKMVVFDLDYTLWPLHVHD-LVAPFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCL 73
PK++VFDLDYTLWP +V + PF+K G K+ D G + + VP +L L + L
Sbjct: 5 PKLIVFDLDYTLWPFYVDTHVTPPFRKEGTGKIYDRHGKRVNVFPDVPAMLESLTSQRYL 64
Query: 74 VAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133
+ ASRT + A++++ +++ N+YF +EIYPG K THF+ + TG+ YK M+FFDDE
Sbjct: 65 LGLASRTDDPDAARELVTILDWNKYFPYQEIYPGCKITHFKRFHQQTGLPYKQMLFFDDE 124
Query: 134 ERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162
RN HDVS LGVTCIH+ MS G L+E
Sbjct: 125 LRNIHDVSTLGVTCIHAQRGMSHGHLEEG 153
|
Source: Ixodes ricinus Species: Ixodes ricinus Genus: Ixodes Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | ||||||
| UNIPROTKB|F1MXF2 | 164 | MDP-1 "Uncharacterized protein | 0.280 | 0.920 | 0.496 | 5.1e-32 | |
| RGD|1311147 | 164 | Mdp1 "magnesium-dependent phos | 0.252 | 0.829 | 0.543 | 5.1e-32 | |
| UNIPROTKB|Q86V88 | 176 | MDP1 "Magnesium-dependent phos | 0.252 | 0.772 | 0.536 | 1.1e-31 | |
| MGI|MGI:1915131 | 164 | Mdp1 "magnesium-dependent phos | 0.252 | 0.829 | 0.543 | 1.5e-31 | |
| UNIPROTKB|F1SGN7 | 164 | LOC100520440 "Uncharacterized | 0.256 | 0.841 | 0.485 | 1.2e-30 | |
| ZFIN|ZDB-GENE-090311-51 | 160 | si:dkeyp-27c8.2 "si:dkeyp-27c8 | 0.247 | 0.831 | 0.503 | 1.7e-29 | |
| UNIPROTKB|E9PL57 | 170 | NEDD8-MDP1 "Protein NEDD8-MDP1 | 0.217 | 0.688 | 0.487 | 7.7e-25 | |
| ASPGD|ASPL0000029748 | 215 | AN5512 [Emericella nidulans (t | 0.135 | 0.339 | 0.465 | 1.6e-22 | |
| POMBASE|SPBP8B7.31 | 172 | SPBP8B7.31 "acid phosphatase ( | 0.245 | 0.767 | 0.438 | 5.4e-22 | |
| UNIPROTKB|Q32PA3 | 127 | MDP-1 "Uncharacterized protein | 0.159 | 0.677 | 0.534 | 4.9e-20 |
| UNIPROTKB|F1MXF2 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 353 (129.3 bits), Expect = 5.1e-32, P = 5.1e-32
Identities = 77/155 (49%), Positives = 98/155 (63%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V V PF K V D +G I+ Y VPE+L L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKNSDGTVRDRRGQSIQLYPEVPEVLERLRGLG 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
+AAASRT E+ A Q+L L +L +YF ++EIYPG K THFE L++ TG+ + M+FFD
Sbjct: 63 VPIAAASRTGEVEGANQLLELFDLVRYFVHREIYPGSKVTHFERLQRKTGVPFSQMIFFD 122
Query: 132 DEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGID 166
DE+RN DVS LGVTCIH MS L + G+D
Sbjct: 123 DEKRNIVDVSKLGVTCIHVQHGMSLQTLTQ--GLD 155
|
|
| RGD|1311147 Mdp1 "magnesium-dependent phosphatase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 353 (129.3 bits), Expect = 5.1e-32, P = 5.1e-32
Identities = 75/138 (54%), Positives = 88/138 (63%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V V PF K V D +G I+ Y VPEIL L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDIRLYPEVPEILGRLQSLG 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
VAAASRTSEI A Q+L L +L +YF +EIYPG K THFE L+ TG+ + M+FFD
Sbjct: 63 VPVAAASRTSEIEGANQLLELFDLGKYFIQREIYPGSKVTHFERLRNKTGVPFSQMIFFD 122
Query: 132 DEERNSHDVSPLGVTCIH 149
DE RN DV LGVTCIH
Sbjct: 123 DENRNIIDVGKLGVTCIH 140
|
|
| UNIPROTKB|Q86V88 MDP1 "Magnesium-dependent phosphatase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 350 (128.3 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 74/138 (53%), Positives = 91/138 (65%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V V PF K V D +G ++ Y VPE+L+ L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLG 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
AAASRTSEI A Q+L L +L +YF ++EIYPG K THFE L++ TGI + M+FFD
Sbjct: 63 VPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFD 122
Query: 132 DEERNSHDVSPLGVTCIH 149
DE RN DVS LGVTCIH
Sbjct: 123 DERRNIVDVSKLGVTCIH 140
|
|
| MGI|MGI:1915131 Mdp1 "magnesium-dependent phosphatase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 349 (127.9 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 75/138 (54%), Positives = 87/138 (63%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V V PF K V D +G I+ Y VPE+L L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLG 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
VAAASRTSEI A Q+L L +L +YF +EIYPG K THFE L TG+ + MVFFD
Sbjct: 63 VPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFD 122
Query: 132 DEERNSHDVSPLGVTCIH 149
DE RN DV LGVTCIH
Sbjct: 123 DENRNIIDVGRLGVTCIH 140
|
|
| UNIPROTKB|F1SGN7 LOC100520440 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 341 (125.1 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 68/140 (48%), Positives = 91/140 (65%)
Query: 12 VKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKE 69
+++ PK+ VFDLDYTLWP V V PF K + D +G ++ Y VPE+L L+
Sbjct: 1 MERLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTIRDRRGQTVRLYPEVPEVLERLQG 60
Query: 70 NKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVF 129
VAAASRT E+ A Q+L L +L ++F ++EIYPG K THFE L + TG+ + M+F
Sbjct: 61 LGVPVAAASRTGEVEGANQLLELFDLVRHFVHREIYPGSKVTHFERLHRKTGVPFSQMIF 120
Query: 130 FDDEERNSHDVSPLGVTCIH 149
FDDE+RN DVS LGV C+H
Sbjct: 121 FDDEKRNIVDVSKLGVACVH 140
|
|
| ZFIN|ZDB-GENE-090311-51 si:dkeyp-27c8.2 "si:dkeyp-27c8.2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 331 (121.6 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 68/135 (50%), Positives = 89/135 (65%)
Query: 16 PKMVVFDLDYTLWPLHVHDLV-APFKKIGQKVM-DAKGTLIKYYRGVPEILRYLKENKCL 73
PK++VFDLDYTLWP V V APF + ++ D++ + Y +ILR L
Sbjct: 4 PKLIVFDLDYTLWPFWVDTHVQAPFHIDDEGIVKDSRREKVPIYHDTEKILRSLHSQGYK 63
Query: 74 VAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133
+ ASRTSE A Q+L+L NL+QY S KEIYPG K THF+ LK A+G+++ DM+FFDDE
Sbjct: 64 IGIASRTSETEGANQLLSLYNLDQYISFKEIYPGSKVTHFKRLKSASGVQFSDMMFFDDE 123
Query: 134 ERNSHDVSPLGVTCI 148
ERN +V LGVTC+
Sbjct: 124 ERNIVEVGRLGVTCV 138
|
|
| UNIPROTKB|E9PL57 NEDD8-MDP1 "Protein NEDD8-MDP1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 289 (106.8 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF 473
V D G ++ Y +VP +LK L+ AAASRT+E+ A+QL++LF+ ++F H+EI+
Sbjct: 54 VRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY 113
Query: 474 PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKG 530
PG K THF L++ TGI + M+FFDDE RN DVS LGVTCIH+++GM+ L +G
Sbjct: 114 PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQG 170
|
|
| ASPGD|ASPL0000029748 AN5512 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 466 HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525
+FD+ +IFP KT HF+ + +A+GI Y+DM+FFDDE RN + + LGVT + V+DGM+
Sbjct: 133 YFDYIQIFPATKTQHFSRIHQASGIAYEDMLFFDDEARNRNVETELGVTFLLVRDGMTRD 192
Query: 526 VLHKGLKQWASKN 538
+ KG+ W +N
Sbjct: 193 EVDKGVWAWRRRN 205
|
|
| POMBASE|SPBP8B7.31 SPBP8B7.31 "acid phosphatase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 263 (97.6 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 64/146 (43%), Positives = 87/146 (59%)
Query: 14 KFPKMVVFDLDYTLWPLHVHDLV-APFK--KIGQKVM-DAKGTLIKYYRGVPEILRYLKE 69
+FPK VVFDLDYTLWPL + V APFK K V+ D GT I +Y + IL+ L+
Sbjct: 6 EFPKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRN 65
Query: 70 NKCLVAAASRTSEILHAKQILNLINLN---------QYFSNKEIYPGQKTTHFESLKKAT 120
K + ASRT +AKQ LNL+ + ++F+ + +PG K HF+ + +
Sbjct: 66 QKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNES 125
Query: 121 GIEYKDMVFFDDEERNSHDVSPLGVT 146
GI+Y++MVFFDDE RN +V LGVT
Sbjct: 126 GIDYREMVFFDDESRN-REVERLGVT 150
|
|
| UNIPROTKB|Q32PA3 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 245 (91.3 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 46/86 (53%), Positives = 64/86 (74%)
Query: 446 SRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNS 505
+RT E+ A+QL++LF+ ++F H+EI+PG K THF L++ TG+ + M+FFDDE+RN
Sbjct: 32 NRTGEVEGANQLLELFDLVRYFVHREIYPGSKVTHFERLQRKTGVPFSQMIFFDDEKRNI 91
Query: 506 HDVSPLGVTCIHVKDGMSHSVLHKGL 531
DVS LGVTCIHV+ GMS L +GL
Sbjct: 92 VDVSKLGVTCIHVQHGMSLQTLTQGL 117
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9D967 | MGDP1_MOUSE | 3, ., 1, ., 3, ., 4, 8 | 0.5357 | 0.2565 | 0.8414 | yes | N/A |
| Q86V88 | MGDP1_HUMAN | 3, ., 1, ., 3, ., 4, 8 | 0.5289 | 0.2527 | 0.7727 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 538 | |||
| pfam12689 | 164 | pfam12689, Acid_PPase, Acid Phosphatase | 1e-55 | |
| pfam12689 | 164 | pfam12689, Acid_PPase, Acid Phosphatase | 1e-45 | |
| pfam12689 | 164 | pfam12689, Acid_PPase, Acid Phosphatase | 2e-33 | |
| TIGR01685 | 174 | TIGR01685, MDP-1, magnesium-dependent phosphatase- | 3e-14 | |
| pfam12689 | 164 | pfam12689, Acid_PPase, Acid Phosphatase | 1e-13 | |
| TIGR01685 | 174 | TIGR01685, MDP-1, magnesium-dependent phosphatase- | 2e-13 | |
| pfam12689 | 164 | pfam12689, Acid_PPase, Acid Phosphatase | 1e-08 | |
| TIGR01685 | 174 | TIGR01685, MDP-1, magnesium-dependent phosphatase- | 3e-07 | |
| TIGR01681 | 128 | TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatas | 3e-07 | |
| TIGR01681 | 128 | TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatas | 1e-06 | |
| COG4996 | 164 | COG4996, COG4996, Predicted phosphatase [General f | 5e-06 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-06 | |
| COG4996 | 164 | COG4996, COG4996, Predicted phosphatase [General f | 8e-05 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 1e-04 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 0.001 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 0.001 |
| >gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase | Back alignment and domain information |
|---|
Score = 183 bits (468), Expect = 1e-55
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 8/143 (5%)
Query: 15 FPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKC 72
PK++VFDLDYTLWP V PFKK V+D +G + Y VP IL+ LKE
Sbjct: 2 LPKLIVFDLDYTLWPFWCDTHVGPPFKKDKNGTVVDRRGEELSLYPDVPSILQELKEKGI 61
Query: 73 LVAAASRTSEILHAKQILNLINLN------QYFSNKEIYPGQKTTHFESLKKATGIEYKD 126
+A ASRT A+++L L+++N YF EIYPG KTTHF+ + K +G+ Y D
Sbjct: 62 TIAVASRTDAPDWARELLKLLHINDGPPAIDYFDYLEIYPGSKTTHFKKIHKKSGVPYSD 121
Query: 127 MVFFDDEERNSHDVSPLGVTCIH 149
M+FFDDE RN VS LGVT +
Sbjct: 122 MLFFDDESRNIDVVSRLGVTFVL 144
|
This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164 |
| >gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 1e-45
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 412 DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN------Q 465
V+D G + Y DVP+IL+ LK+ +A ASRT A +L+ L + N
Sbjct: 33 GTVVDRRGEELSLYPDVPSILQELKEKGITIAVASRTDAPDWARELLKLLHINDGPPAID 92
Query: 466 HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525
+FD+ EI+PG KTTHF + K +G+ Y DM+FFDDE RN VS LGVT + V DG++
Sbjct: 93 YFDYLEIYPGSKTTHFKKIHKKSGVPYSDMLFFDDESRNIDVVSRLGVTFVLVPDGLTRE 152
Query: 526 VLHKGLKQWASK 537
+GL++W +
Sbjct: 153 EFERGLRKWRKR 164
|
This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164 |
| >gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 2e-33
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 297 KHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLL----- 351
K K V D +G L+LY D+P I++ LK+ I +A+ASRT A LL LL
Sbjct: 28 KKDKNGTVVDRRGEELSLYPDVPSILQELKEKGITIAVASRTDAPDWARELLKLLHINDG 87
Query: 352 -GLSDFFDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQV 409
D+FDY EI+P K HF + K S + Y DM+FFDDE RN +S+LGV + V
Sbjct: 88 PPAIDYFDYLEIYPG-SKTTHFKKIHKKSGVPYSDMLFFDDESRNIDVVSRLGVTFVLV 145
|
This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164 |
| >gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 3e-14
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 15 FPKMVVFDLDYTLWPLH-VHDLVAPFKKIGQK---VMDAKGTLIKYYRGVPEILRYLKEN 70
P+++VFDLD TLW + + L PFK + Q ++D GT + + V ++L+ LK+
Sbjct: 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA 60
Query: 71 KCLVAAASRTSEILHAKQILNL---------INLNQYFSNKEI--YPGQKTTHFESLKK- 118
+A AS A +IL + ++ F ++ P + L+K
Sbjct: 61 GTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120
Query: 119 -ATG---IEYKDMVFFDDEERNSHDVSPLGVT--CIHSW 151
++ ++FFDD N +V GVT S
Sbjct: 121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSG 159
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174 |
| >gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 1e-13
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 232 VLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILEMIGV------ARYF 285
V+D G + Y DVP IL+ L+E I +A S T + +L+++ + YF
Sbjct: 35 VVDRRGEELSLYPDVPSILQELKEKGITIAVASRTDAPDWARELLKLLHINDGPPAIDYF 94
Query: 286 DHKEIYPRQKTKHLKK 301
D+ EIYP KT H KK
Sbjct: 95 DYLEIYPGSKTTHFKK 110
|
This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164 |
| >gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 2e-13
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 301 KDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLL--------- 351
+ D GT + L +++ ++++ LKD LA AS AY +L
Sbjct: 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV 92
Query: 352 GLSDFFDYKEIFPAEKKIKHFANLKKD------SKIKYKDMVFFDDEERNARSISKLGV 404
+ FD + K K + + S +K ++FFDD N R + GV
Sbjct: 93 PMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGV 151
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174 |
| >gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-08
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 172 YFDDEQ-------EHVNDISKLGVTATRKDSKIKYKDMVFFDDEERNARSISKLGVIGIQ 224
YFD + H K+ K S + Y DM+FFDDE RN +S+LGV +
Sbjct: 93 YFDYLEIYPGSKTTH---FKKI-----HKKSGVPYSDMLFFDDESRNIDVVSRLGVTFVL 144
Query: 225 VMHSMT 230
V +T
Sbjct: 145 VPDGLT 150
|
This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164 |
| >gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-07
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN---------WN 464
++D G + ++V +L+ LK +A AS A++++ F +
Sbjct: 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMH 95
Query: 465 QHFDHKEIFP-GQKTTHFANL------KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 517
FD + K + + ++ ++FFDD N +V GVT +
Sbjct: 96 SLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155
Query: 518 VKDGMSHSVLHKGLKQWAS 536
GM K L+ W S
Sbjct: 156 CPSGMDKGTFKKILEMWRS 174
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174 |
| >gnl|CDD|233526 TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAA 76
K++VFDLD TLW +G+ + IK + + L+ LK+N L+A
Sbjct: 1 KVIVFDLDNTLWTGE-------NIVVGEDPIIDLEVTIKE---IRDKLQTLKKNGFLLAL 50
Query: 77 ASRTS------EILHAKQILNLIN-LNQYFSNKEI--YPGQKTTHFESLKKATG-IEYKD 126
AS E+L + +I L +YF I + + E K G ++ K
Sbjct: 51 ASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKS 110
Query: 127 MVFFDDEERNSHDVS 141
++F DD N+ +V
Sbjct: 111 ILFVDDRPDNNEEVD 125
|
This model represents the IIIC subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. Subfamily III (also including IIIA - TIGR01662 and IIIB - pfam03767) contains sequences which do not contain either of the insert domains (between the 1st and 2nd conserved catalytic motifs, subfamily I - TIGR01493, TIGR01509, TIGR01549, TIGR01488, TIGR01494, TIGR01658, TIGR01544 and TIGR01545, or between the 2nd and 3rd, subfamily II - TIGR01460 and TIGR01484). Subfamily IIIC contains five relatively distantly related clades: a family of viral proteins (TIGR01684), a family of eukaryotic proteins called MDP-1 and a family of archaeal proteins most closely related to MDP-1 (TIGR01685), a family of bacteria including the Streptomyces FkbH protein (TIGR01686), and a small clade including the Pasteurella BcbF and EcbF proteins. The overall lack of species overlap among these clades may indicate a conserved function, but the degree of divergence between the clades and the differences in archetecture outside of the domain in some clades warns against such a conclusion. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. Length = 128 |
| >gnl|CDD|233526 TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 305 EDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLL-------HLLGLSDFF 357
ED L ++I + ++ LK + LALAS AY LL + L+++F
Sbjct: 21 EDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYF 80
Query: 358 DYKEIFPAEKKIKHFAN--LKKDSKIKYKDMVFFDDEERNARSISKLG 403
D I K LK + +K K ++F DD N +
Sbjct: 81 DPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDYYL 128
|
This model represents the IIIC subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. Subfamily III (also including IIIA - TIGR01662 and IIIB - pfam03767) contains sequences which do not contain either of the insert domains (between the 1st and 2nd conserved catalytic motifs, subfamily I - TIGR01493, TIGR01509, TIGR01549, TIGR01488, TIGR01494, TIGR01658, TIGR01544 and TIGR01545, or between the 2nd and 3rd, subfamily II - TIGR01460 and TIGR01484). Subfamily IIIC contains five relatively distantly related clades: a family of viral proteins (TIGR01684), a family of eukaryotic proteins called MDP-1 and a family of archaeal proteins most closely related to MDP-1 (TIGR01685), a family of bacteria including the Streptomyces FkbH protein (TIGR01686), and a small clade including the Pasteurella BcbF and EcbF proteins. The overall lack of species overlap among these clades may indicate a conserved function, but the degree of divergence between the clades and the differences in archetecture outside of the domain in some clades warns against such a conclusion. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. Length = 128 |
| >gnl|CDD|227329 COG4996, COG4996, Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 285 FDHKEIY----PRQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVH 340
+DH I P ++ +ED+KG ++L+ D+ E +K+ ++ L LAS
Sbjct: 12 WDHHNISSLEPPFRRVSSNT---IEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE 68
Query: 341 IRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFA------NLKKDSKIKYKDMVFFDDEER 394
+ A L L L +F Y I P K + N +++ KIK ++V+ DD
Sbjct: 69 DK-AIKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRI 127
Query: 395 NARSI 399
+ +I
Sbjct: 128 HFGNI 132
|
Length = 164 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 8e-06
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 7/181 (3%)
Query: 229 MTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILH--VQNILEMIGVARYFD 286
+ L V+ + + L ++ A + T V+ +L
Sbjct: 8 LDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELL 67
Query: 287 HKEIYPRQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYS 346
+ + + V LY E +K LK+ IKLA+ + + A +
Sbjct: 68 EELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGD-NRLTANA 126
Query: 347 LLHLLGLSDFFDYKEIFPAEKKIKH----FANLKKDSKIKYKDMVFFDDEERNARSISKL 402
+ LLGL D +++ K F ++ +K ++++ D + +
Sbjct: 127 IARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 403 G 403
G
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|227329 COG4996, COG4996, Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 8e-05
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 17 KMVVFDLDYTLWPLH-VHDLVAPFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLV 74
+ +VFD D TLW H + L PF+++ + D+KG + + V E L++ + + ++
Sbjct: 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYIL 60
Query: 75 AAASRTSEILHAKQILNLINLNQYFSNKEIYPGQK-----TTHFESLKKATGIEYK--DM 127
AS E A + L ++L QYF I P + + + K ++
Sbjct: 61 GLASWNFE-DKAIKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEI 119
Query: 128 VFFDDEERNSHDV-SPLG-VTCIHSW 151
V+ DD + ++ LG V C+ W
Sbjct: 120 VYLDDRRIHFGNIWEYLGNVKCLEMW 145
|
Length = 164 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 15/183 (8%)
Query: 267 VRILHVQNILEMIGVARYFDHKEIYPRQKTKHLKKD--RVEDAKGTLLNLYRDIPEIVKY 324
+ L + + + + + +D VE+ L L D PE ++
Sbjct: 48 IEKLEARFLRGEYTGEYGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEA 107
Query: 325 LKD--HNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIK----HFANLKKD 378
LK+ KL + + + L LGL D+FD I K F +
Sbjct: 108 LKELGKKYKLGILTNGAR-PHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEK 166
Query: 379 SKIKYKDMVFFDDEERN-ARSISKLGVIGIQVHR-----DKVLDAGGAIIKYYRDVPAIL 432
+ ++ +F D N LG+ + ++R L+A I ++ +L
Sbjct: 167 LGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226
Query: 433 KYL 435
+ L
Sbjct: 227 ERL 229
|
Length = 229 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 281 VARYFDHKEIYPRQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVH 340
+A I P + + L + +E L + D+ E+++ LK +KL + S
Sbjct: 49 LADLLREHPIDPDEILEALLEYNLESR----LEPFPDVVELLRRLKAKGVKLVILS-NGS 103
Query: 341 IRNAYSLLHLLGLSDFFDYKEIFPAE--KKIKH----FANLKKDSKIKYKDMVFFDDEER 394
LL LGL D FD +F ++ K + + + + ++++F DD
Sbjct: 104 REAVERLLEKLGLLDLFD--AVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPE 161
Query: 395 NARSISKLGVIGIQV 409
+ + G+ + V
Sbjct: 162 DLEAARAAGIKTVHV 176
|
Length = 176 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 13/155 (8%)
Query: 264 STTVRILHVQNILEMIGVARYFDHKEIYPRQKTK----HLKKDRVEDAK-GTLLNLYRDI 318
L V + + R + K Y R + L K +A L +
Sbjct: 27 PLVPDELGVSEVGSLELALRRW--KAKYGRTMSAEDAQLLYKQLFYEALEKEGLKPLPGV 84
Query: 319 PEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIK----HFAN 374
+++ L+ KLAL + + L LGL FD K +
Sbjct: 85 RALLEALRARGKKLALLTNSPRADAKLVLE--LGLRALFDVVIDSSDVGLGKPDPDIYLQ 142
Query: 375 LKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQV 409
K +K + +F DD + G+ + V
Sbjct: 143 ALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.97 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.9 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.87 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.84 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.84 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.83 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.83 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 99.82 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.82 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.82 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.81 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.81 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.81 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.8 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.8 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.8 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.8 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.79 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.79 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.79 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.78 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.78 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.78 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.77 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.77 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.77 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.76 | |
| PLN02940 | 382 | riboflavin kinase | 99.76 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.74 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.74 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.74 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.74 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.73 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.73 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.73 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.72 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.72 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.71 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.71 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.71 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.71 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.71 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.7 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.7 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.67 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.67 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.67 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.66 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.66 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.65 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.65 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.64 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.64 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.64 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.62 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.62 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.6 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.6 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.6 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.59 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.59 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.59 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.59 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.58 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.58 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.57 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.57 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.57 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.56 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.56 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.56 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.55 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.55 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.55 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.55 | |
| KOG3085|consensus | 237 | 99.54 | ||
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.54 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.54 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.53 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.53 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.53 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.53 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.52 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.52 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.52 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.51 | |
| PLN02811 | 220 | hydrolase | 99.51 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.51 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.51 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.51 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.5 | |
| KOG2914|consensus | 222 | 99.49 | ||
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.49 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.49 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.49 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.49 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.48 | |
| PLN02811 | 220 | hydrolase | 99.48 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.47 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.47 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.46 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.46 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.45 | |
| PLN02940 | 382 | riboflavin kinase | 99.45 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.45 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.45 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.45 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.45 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.45 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.45 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.45 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.44 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.44 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.44 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.44 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.43 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.42 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.42 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.42 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.41 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.41 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.41 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.41 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.4 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.4 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.39 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.39 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.38 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.38 | |
| KOG3109|consensus | 244 | 99.38 | ||
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.37 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.37 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.37 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.37 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 99.34 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.34 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.33 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.31 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.29 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.27 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.27 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.27 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.26 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.25 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.24 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.23 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.23 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.22 | |
| KOG2914|consensus | 222 | 99.22 | ||
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.22 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.21 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.2 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.19 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.19 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.18 | |
| KOG4549|consensus | 144 | 99.17 | ||
| KOG2882|consensus | 306 | 99.17 | ||
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.16 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.16 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.16 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.15 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.14 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.12 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.07 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.07 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.07 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.04 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.04 | |
| KOG4549|consensus | 144 | 99.04 | ||
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.03 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.0 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.0 | |
| KOG3085|consensus | 237 | 98.99 | ||
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 98.95 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.95 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.92 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.89 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.88 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.85 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.85 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.84 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.83 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.83 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.81 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.8 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 98.79 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.79 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.78 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.77 | |
| KOG3040|consensus | 262 | 98.75 | ||
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.74 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.73 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.69 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.69 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.69 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.67 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.65 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.65 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.65 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 98.64 | |
| KOG3109|consensus | 244 | 98.64 | ||
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.64 | |
| KOG1615|consensus | 227 | 98.63 | ||
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.57 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.57 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.56 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.55 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.54 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.53 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.53 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.53 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.52 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.51 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.51 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.51 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.5 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.45 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.44 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.44 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 98.44 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.39 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.37 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.37 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.31 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.3 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.29 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.27 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.25 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.25 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.25 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.2 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.2 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.19 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.18 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.17 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 98.16 | |
| PLN02887 | 580 | hydrolase family protein | 98.15 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.06 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.05 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.05 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 98.05 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.04 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.04 | |
| KOG3120|consensus | 256 | 98.03 | ||
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.01 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.0 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 97.97 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.94 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.93 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.93 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.91 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.88 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 97.86 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.86 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.81 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.8 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.67 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.63 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.61 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 97.61 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.6 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.6 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.59 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 97.58 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.58 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.55 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.55 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 97.54 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.53 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.52 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.51 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.48 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.48 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.47 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.45 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 97.45 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.43 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 97.4 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.35 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.34 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.31 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 97.24 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.23 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.22 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.2 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.2 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.17 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 97.15 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.1 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.08 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.06 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.05 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.04 | |
| KOG2630|consensus | 254 | 96.98 | ||
| KOG2961|consensus | 190 | 96.92 | ||
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 96.92 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 96.9 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.9 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.89 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 96.89 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.88 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.86 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 96.77 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 96.76 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.76 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.75 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.7 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.69 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.68 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.68 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 96.54 | |
| KOG1615|consensus | 227 | 96.53 | ||
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.35 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.29 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.29 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.16 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.13 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.12 | |
| KOG2630|consensus | 254 | 96.09 | ||
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.04 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.02 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 95.98 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.93 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.87 | |
| KOG3120|consensus | 256 | 95.76 | ||
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.73 | |
| KOG3040|consensus | 262 | 95.64 | ||
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 95.48 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 95.47 | |
| PLN02887 | 580 | hydrolase family protein | 95.38 | |
| PLN02423 | 245 | phosphomannomutase | 95.35 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 95.31 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.25 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 95.22 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 95.18 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 95.01 | |
| KOG0207|consensus | 951 | 94.98 | ||
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.9 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 94.75 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 94.56 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 94.45 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 94.43 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 94.3 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 94.13 | |
| KOG2470|consensus | 510 | 94.07 | ||
| PLN03017 | 366 | trehalose-phosphatase | 93.91 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.47 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.46 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 93.28 | |
| KOG0202|consensus | 972 | 93.25 | ||
| PLN02580 | 384 | trehalose-phosphatase | 93.14 | |
| KOG1618|consensus | 389 | 93.12 | ||
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 92.95 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 92.7 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 92.69 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 92.68 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 92.66 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 92.31 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 92.24 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.16 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 91.91 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 91.84 | |
| KOG2134|consensus | 422 | 91.65 | ||
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 91.45 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 91.41 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 91.31 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 91.23 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 91.08 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.07 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 90.25 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 90.2 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 89.69 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 89.66 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 89.46 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 89.34 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 89.28 | |
| KOG0207|consensus | 951 | 89.26 | ||
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 89.19 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 89.18 | |
| KOG3189|consensus | 252 | 88.72 | ||
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 88.1 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 87.45 | |
| KOG2882|consensus | 306 | 87.11 | ||
| KOG3107|consensus | 468 | 86.09 | ||
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 85.98 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 85.27 | |
| KOG1605|consensus | 262 | 84.83 | ||
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 84.39 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.98 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 83.67 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.61 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 82.98 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 82.56 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 81.43 |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=244.65 Aligned_cols=152 Identities=39% Similarity=0.659 Sum_probs=119.1
Q ss_pred CccceEEeecC-----CCCcCCC-CCCcccccccccc-hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHH
Q psy8912 382 KYKDMVFFDDE-----ERNARSI-SKLGVIGIQVHRD-KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA 454 (538)
Q Consensus 382 ~~~~l~~~Dld-----h~~~s~~-~p~~~i~i~~~~~-~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a 454 (538)
++|.|+||||| +...+-+ |||+.. ..+ .++|++|+++.+||+|+++|++|+++|+++|+||+|++|++|
T Consensus 1 ~~PklvvFDLD~TlW~~~~~~~~~~Pf~~~----~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A 76 (169)
T PF12689_consen 1 RLPKLVVFDLDYTLWPPWMDTHVGPPFKKI----SNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWA 76 (169)
T ss_dssp TS-SEEEE-STTTSSSS-TTTSS-S-EEE-----TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHH
T ss_pred CCCcEEEEcCcCCCCchhHhhccCCCceec----CCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHH
Confidence 58999999999 7777777 799954 444 899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCc----------cccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 455 HQLVDLFNWN----------QHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 455 ~~~L~~lgL~----------~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+++|+.|++. +||++.+|++++|..||.++.+++|++++++|||||+.++++.+++.|++|+.|++|+|+
T Consensus 77 ~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 77 RELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--H
T ss_pred HHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCH
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy8912 525 SVLHKGLKQWASK 537 (538)
Q Consensus 525 ~~~~~~l~~~~~~ 537 (538)
+.|++||++|++|
T Consensus 157 ~~~~~gL~~~~~k 169 (169)
T PF12689_consen 157 DEFERGLEKFRKK 169 (169)
T ss_dssp HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999986
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=200.51 Aligned_cols=152 Identities=20% Similarity=0.327 Sum_probs=127.7
Q ss_pred ccceEEeecC-----CCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 383 YKDMVFFDDE-----ERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 383 ~~~l~~~Dld-----h~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
+|.|+||||| |.++|-+ +|++.+ .-....+.+..+..+.+||||.++|++|+++|++++|+|++...+.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~ 78 (174)
T TIGR01685 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPV--KQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYE 78 (174)
T ss_pred CCcEEEEeCCCCCcCcccccccCCCceec--cCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHH
Confidence 6899999999 9999888 688733 4455568999999999999999999999999999999998834568899
Q ss_pred HHhhcCCc---------cccccceeecC-CchHHHHHHHHH----h--CCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 457 LVDLFNWN---------QHFDHKEIFPG-QKTTHFANLKKA----T--GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 457 ~L~~lgL~---------~yFd~~~i~~~-~k~~~~~kal~~----l--gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+|+.+++. +||+...+... .++.+...++++ + |++|++|+||||+..|+++|+++|+.++++++
T Consensus 79 ~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 79 ILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred HHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 99999999 99995333222 333333333333 3 69999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh
Q psy8912 521 GMSHSVLHKGLKQWAS 536 (538)
Q Consensus 521 g~t~~~~~~~l~~~~~ 536 (538)
|.+..+|.++||+|++
T Consensus 159 g~~~~~~~~~~~~~~~ 174 (174)
T TIGR01685 159 GMDKGTFKKILEMWRS 174 (174)
T ss_pred CccHHHHHHHHHHhcC
Confidence 9999999999999984
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-22 Score=232.37 Aligned_cols=167 Identities=19% Similarity=0.174 Sum_probs=137.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC-CCCccee---ec--CCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKE---IY--PGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~-~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
.++||+.++|++|+++|++++|+||+.. ..++..++.+|+. .+|+.+. .. .+++|++|..+++++|++|++|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~-~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADR-IKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 4799999999999999999999999988 8999999999996 7899872 22 34567999999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhhcCCcccccc-c---ccccccccc
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISKLGVTATRKD-S---KIKYKDMVF 204 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~~g~~~~~~~-~---~~~~~~~~~ 204 (538)
||||+..|+++|+++||++|+|.++... . .+....+++++.+..+..+.++...|...+..- | .-.-++...
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~---~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCIAVTTTLSE-E---ILKDAGPSLIRKDIGNISLSDILTGGSDATPNVTGMDWINTILDTGS 315 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCCH-H---HHhhCCCCEEECChHHCCHHHHHhcCCCCCCCccchhhhcccccccc
Confidence 9999999999999999999999998632 2 344567899999988888877766665543222 2 233344445
Q ss_pred ccccccccchhhcccceeeeee
Q psy8912 205 FDDEERNARSISKLGVIGIQVM 226 (538)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~ 226 (538)
.-+.+++||+|||||||||++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ 337 (1057)
T PLN02919 316 ILGFQGSRRDILRYGSLGIALS 337 (1057)
T ss_pred ccCcccchhhhhhhhhhhhhhh
Confidence 5699999999999999999964
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-21 Score=182.86 Aligned_cols=150 Identities=47% Similarity=0.793 Sum_probs=116.9
Q ss_pred CCceEEEeCCCCCChhhHhhhh-chhHHHHH--HHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ--KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~--~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
.||+|+||+|+|||+.|++.+. +|++.... .+.++....+.+||++.++|+.|+++|++++++|.++.|+.++.+|+
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence 3799999999999999999999 99988884 57788899999999999999999999999999998888899999999
Q ss_pred HcCCC----------CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHH
Q psy8912 92 LINLN----------QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKE 161 (538)
Q Consensus 92 ~lgL~----------~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~ 161 (538)
.+++. ++|+..++++++|...|..+.++.|+++++++||+|...++...++.|+.|++|..|.+...+.+
T Consensus 82 ~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~ 161 (169)
T PF12689_consen 82 LLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFER 161 (169)
T ss_dssp HTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHH
T ss_pred hcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999888877
Q ss_pred hhC
Q psy8912 162 ATG 164 (538)
Q Consensus 162 ~l~ 164 (538)
++.
T Consensus 162 gL~ 164 (169)
T PF12689_consen 162 GLE 164 (169)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-20 Score=184.98 Aligned_cols=121 Identities=11% Similarity=0.135 Sum_probs=104.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+.+ +. .++++|++|..+++++|++|++
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPR-ENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 4578999999999999999999999999988 9999999999999999987 22 2345668999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|+||||+..|+++|+++|+.+|+|.+|... . .+....+++++.+..+
T Consensus 184 ~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~-~---~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 184 TFVFEDSVSGIKAGVAAGMPVVGLTTRNPE-S---LLMEAKPTFLIKDYED 230 (248)
T ss_pred EEEEcCCHHHHHHHHHCCCEEEEEeCCCCH-H---HHhhcCCCEEeccchh
Confidence 999999999999999999999999998532 2 2334578898887655
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-20 Score=180.06 Aligned_cols=121 Identities=13% Similarity=0.105 Sum_probs=104.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||+.. ..+...++.+|+..||+.+.. . .+++|++|..+++++|++|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMR-DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 4567999999999999999999999999988 899999999999999998722 2 345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+||||+.+|+++|+++|+.+++|.||......+. ...+++++.+..
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~---~~~~~~~i~~~~ 204 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLE---QYKPDFMLDKMS 204 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHh---hcCcCEEECCHH
Confidence 99999999999999999999999999976554333 345788877644
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-20 Score=180.19 Aligned_cols=147 Identities=28% Similarity=0.438 Sum_probs=120.0
Q ss_pred CCceEEEeCCCCCChhhHhhhh-chhHHHH---HHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCC-CcHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLV-APFKKIG---QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT-SEILHAKQI 89 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~---~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~-~~p~~~~~~ 89 (538)
+|++|+||+|+|||.+.+.++. ++++... +.+.+.......+|||+.++|+.|+++|++++|+||+ .. ..++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~-~~~~~~ 79 (174)
T TIGR01685 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVP-EWAYEI 79 (174)
T ss_pred CCcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCCh-HHHHHH
Confidence 4799999999999999988888 6666433 2344556778899999999999999999999999998 66 888999
Q ss_pred HHHcCCC---------CCCcceeecCC---CCH--HHHHHHHHHc--CCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 90 LNLINLN---------QYFSNKEIYPG---QKT--THFESLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 90 L~~lgL~---------~~Fd~ie~~~~---~Kp--~~f~~ale~l--gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
++.+++. ++|+.+..... +|| .++..+.+.+ |++|++|+||||+..|+++|+++|+.++++.+|
T Consensus 80 L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 80 LGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSG 159 (174)
T ss_pred HHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCC
Confidence 9999998 99998633222 232 3345554555 799999999999999999999999999999999
Q ss_pred CCchHhHHh
Q psy8912 154 MSSGRLKEA 162 (538)
Q Consensus 154 ~~~~~~~~~ 162 (538)
.....+.+.
T Consensus 160 ~~~~~~~~~ 168 (174)
T TIGR01685 160 MDKGTFKKI 168 (174)
T ss_pred ccHHHHHHH
Confidence 877666554
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-20 Score=165.50 Aligned_cols=140 Identities=17% Similarity=0.219 Sum_probs=119.5
Q ss_pred ceEEeecC-----CCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q psy8912 385 DMVFFDDE-----ERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 458 (538)
Q Consensus 385 ~l~~~Dld-----h~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L 458 (538)
+++|||+| |+|+|++ |||+.+ +.+.+.|+.|.++.|||.|.++|+|++..|+.++.+||+. +..|.++|
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rV----s~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~-~~kA~~aL 75 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRV----SSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNF-EDKAIKAL 75 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceec----CccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCc-hHHHHHHH
Confidence 47999999 9999999 899955 9999999999999999999999999999999999999986 67999999
Q ss_pred hhcCCccccccceeecC-CchHHHHHHHHH------hCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHH
Q psy8912 459 DLFNWNQHFDHKEIFPG-QKTTHFANLKKA------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHK 529 (538)
Q Consensus 459 ~~lgL~~yFd~~~i~~~-~k~~~~~kal~~------lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~ 529 (538)
+.+++.+||++..+.+. .|..++.++++. +.++|++++|+||+..++...+..=..|-.+..+.+.+.+.+
T Consensus 76 ral~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~e 153 (164)
T COG4996 76 RALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSE 153 (164)
T ss_pred HHhchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHH
Confidence 99999999999888887 466665555555 468999999999999999999994444445555666655544
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.7e-20 Score=180.77 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=102.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+..+|+.+.. ..+++|++|..+++++|++|++
T Consensus 92 ~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~ 170 (229)
T PRK13226 92 TQSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD 170 (229)
T ss_pred hcCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence 4578999999999999999999999999988 888889999999999987622 2345678999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+||||+.+|+++|+++|+.+|+|.||...... .+....+++++.+..
T Consensus 171 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~--~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 171 CVYVGDDERDILAARAAGMPSVAALWGYRLHDD--DPLAWQADVLVEQPQ 218 (229)
T ss_pred EEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCc--ChhhcCCCeeeCCHH
Confidence 999999999999999999999999998753221 122346888776543
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=177.05 Aligned_cols=120 Identities=16% Similarity=0.187 Sum_probs=104.4
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cCCC--CHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YPGQ--KTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~~~--Kp~~f~~ale~lgi~P~e~L 128 (538)
..+|||+.++|..|+++|++++|+||++. ..++..++.+|+..+|+.+.. ...+ +|..+..+++++|++|++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~-~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPE-RELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 58999999999999999999999999999 999999999999999998733 3333 45789999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
||||+.+|+++|+++|+.+++|.||+...+ .+....+|+++.+..+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~---~l~~~~~d~vi~~~~e 212 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSRE---ELAQAGADVVIDSLAE 212 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCc---chhhcCCCEEECCHHH
Confidence 999999999999999999999999985333 2455678998877544
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-19 Score=179.85 Aligned_cols=125 Identities=10% Similarity=-0.005 Sum_probs=104.4
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---ee--cCCCCHHHHHHHHHHcCCC-C
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---EI--YPGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e~--~~~~Kp~~f~~ale~lgi~-P 124 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+| +.+ +. ..+++|++|..+++++|+. |
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~ 174 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDV 174 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCc
Confidence 4568999999999999999999999999988 8999999999999986 765 22 2345679999999999995 9
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc----h----------------HhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS----G----------------RLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~----~----------------~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|+||||+..|+++|+++|+.+|+|.+|... . .....+...+||+|+.+..+
T Consensus 175 ~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~e 247 (253)
T TIGR01422 175 AACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAE 247 (253)
T ss_pred hheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHH
Confidence 99999999999999999999999999998752 1 01234556788998876443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-19 Score=173.86 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=100.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||+.. ..+...++.+|+..+|+.+. .. .+++|++|..+++++|++|++
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLP-VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 3468999999999999999999999999987 88899999999999999862 22 345568999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+||||+. +|+++|+++|+.+|++.++....... .....+++++.+.
T Consensus 170 ~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~--~~~~~~~~~i~~~ 217 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMED--DVYPYPDYEISSL 217 (221)
T ss_pred EEEECCChHHHHHHHHHCCCEEEEECCCCCccccc--ccccCCCeeeCcH
Confidence 99999998 89999999999999999876533211 1223567766553
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=181.77 Aligned_cols=121 Identities=15% Similarity=0.177 Sum_probs=105.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeec--CCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY--PGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~--~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
....+++||+.++|+.|+++|++++|+||++. ..+...++.+|+.++|+.+... ..+||+.|..++++++++|++|+
T Consensus 138 ~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~-~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l 216 (273)
T PRK13225 138 LPALQLFPGVADLLAQLRSRSLCLGILSSNSR-QNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVM 216 (273)
T ss_pred cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEE
Confidence 44578899999999999999999999999988 9999999999999999976221 12478999999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
||||+..|+++|+++|+.+|+|.+|......+. ...|++++.+.
T Consensus 217 ~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~---~~~ad~~i~~~ 260 (273)
T PRK13225 217 YVGDETRDVEAARQVGLIAVAVTWGFNDRQSLV---AACPDWLLETP 260 (273)
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCCCCHHHHH---HCCCCEEECCH
Confidence 999999999999999999999999987665443 34688887654
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=178.08 Aligned_cols=104 Identities=18% Similarity=0.189 Sum_probs=94.1
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---e--ecCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---E--IYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e--~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|..|+++|++++++||+++ ..++..++.+|+.+||+.+ + ..+++.|++|+.+++++|+.|+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~-~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPR-RAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChH-HHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 55678999999999999999999999999988 8999999999999999986 1 2234567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
+|++|+|+.+++++|+++||.+|++..+..
T Consensus 161 ~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 161 ECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred HeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 999999999999999999999999987544
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-19 Score=172.45 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=104.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+.++|+.+.. .++++|++|..+++++|++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSG-PRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 4578999999999999999999999999988 889999999999999997621 2345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+||||+..|+.+|+++|+.++++.||....+.+ ....+++++.+..
T Consensus 151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l---~~~~~~~~~~~~~ 197 (205)
T TIGR01454 151 AVMVGDAVTDLASARAAGTATVAALWGEGDAGEL---LAARPDFLLRKPQ 197 (205)
T ss_pred eEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhh---hhcCCCeeeCCHH
Confidence 9999999999999999999999999998765543 3456888876643
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=178.86 Aligned_cols=121 Identities=13% Similarity=0.125 Sum_probs=102.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||++. ..+...++.+|+..||+.+. .. .+++|++|..+++++|++|++|
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPR-RYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCH-HHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 567899999999999999999999999988 89999999999999999872 22 3456799999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhH
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHV 180 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~ 180 (538)
+||||+..|+++|+++||.+|+|. |...... +. .+++++.+..+...
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~---l~--~ad~vi~~~~el~~ 232 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYE---LS--AGDLVVRRLDDLSV 232 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEe-cCCchhh---hc--cCCEEeCCHHHHHH
Confidence 999999999999999999999996 5443322 22 47888877655444
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.1e-19 Score=172.89 Aligned_cols=120 Identities=14% Similarity=0.110 Sum_probs=101.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++..++.+++..+|+.+.. .++++|++|..+++++|++|+
T Consensus 88 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (222)
T PRK10826 88 EETRPLLPGVREALALCKAQGLKIGLASASPL-HMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPL 166 (222)
T ss_pred hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHH
Confidence 34578999999999999999999999999988 899999999999999998732 234567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|++|||+.+|+++|+++|+.+|++.++....+.. ...++.++.+.
T Consensus 167 ~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~----~~~~~~~~~~~ 212 (222)
T PRK10826 167 TCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPR----WALADVKLESL 212 (222)
T ss_pred HeEEEcCChhhHHHHHHcCCEEEEecCCccCchhh----hhhhheeccCH
Confidence 99999999999999999999999998876543321 12356666553
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=170.77 Aligned_cols=119 Identities=15% Similarity=0.022 Sum_probs=96.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++|+||++. ......++..++ .+|+.+ +. ..+++|++|..+++++|++|+
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~-~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~ 156 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSV-PVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQ 156 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCc-hHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcc
Confidence 34678999999999999999999999999988 777888888888 456654 11 234556899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|+||||+..|+++|+++|+.+|+|.++.... ....+++++.+..+
T Consensus 157 ~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~------~~~~~~~~~~~~~e 202 (218)
T PRK11587 157 ECVVVEDAPAGVLSGLAAGCHVIAVNAPADTP------RLDEVDLVLHSLEQ 202 (218)
T ss_pred cEEEEecchhhhHHHHHCCCEEEEECCCCchh------hhccCCEEecchhh
Confidence 99999999999999999999999998765321 12357777766544
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=170.64 Aligned_cols=119 Identities=10% Similarity=0.010 Sum_probs=101.9
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC--CCCcceee-----cCCCCHHHHHHHHHHcCCC-C
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKEI-----YPGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~--~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~-P 124 (538)
...++||+.++|+.|+++|++++|+||+.. ..++..++.+|+. .+|+.+.. ..+++|++|..+++++|+. |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDR-DTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 468999999999999999999999999998 9999999999998 99998722 2335679999999999997 7
Q ss_pred CcEEEEeCCcccHHHHhhcCCeE-EEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTC-IHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~t-I~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
++|+||||+..|+++|+++||.+ +++.+|........ ...+++++.+.
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~---~~~~~~~i~~~ 212 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELS---RHPHTHVLDSV 212 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHh---hcCCceeecCH
Confidence 99999999999999999999999 99998876554433 34577777654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.5e-19 Score=169.73 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=102.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+|+.+.. . .+++|++|..+++++|++|++|
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 468999999999999999999999999988 899999999999999997622 2 2456789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+||||+.+|+++|+++|+.+++|.+|....... ....+++++.+..
T Consensus 162 ~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l---~~~~a~~~i~~~~ 207 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAI---DLLPPDVLYDSLN 207 (213)
T ss_pred EEeCCCHHHHHHHHHCCCeEEEEccCCCCCcch---hhcCCCeEeCCHH
Confidence 999999999999999999999999987654433 2345788776543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.7e-19 Score=167.88 Aligned_cols=146 Identities=12% Similarity=0.024 Sum_probs=110.4
Q ss_pred cCCCCceEEEeCCCCC--ChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------
Q psy8912 12 VKKFPKMVVFDLDYTL--WPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------ 83 (538)
Q Consensus 12 m~~~iKaVIFDlDGTL--w~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------ 83 (538)
|++ +|+++||.|||| |+.+.. ...+.++||+.++|++|+++|++++|+||++..
T Consensus 1 ~~~-~~~~~~d~d~~~~~~~~~~~-----------------~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~ 62 (173)
T PRK06769 1 MTN-IQAIFIDRDGTIGGDTTIHY-----------------PGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIAT 62 (173)
T ss_pred CCC-CcEEEEeCCCcccCCCCCCC-----------------HHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCC
Confidence 455 899999999999 431111 125679999999999999999999999998630
Q ss_pred -HHHHHHHHHcCCCCCCccee------ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCc
Q psy8912 84 -LHAKQILNLINLNQYFSNKE------IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~Fd~ie------~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
......++.+|+..+|.... ...+++|++|..++++++++|++|+||||+..|+++|+++|+.+|+|.+|...
T Consensus 63 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 63 IADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred HHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 12344577888877765432 12345679999999999999999999999999999999999999999998754
Q ss_pred hHh---HHhhCCCCCCEEEeCC
Q psy8912 157 GRL---KEATGIDYKDMIYFDD 175 (538)
Q Consensus 157 ~~~---~~~l~~~~~d~Ii~d~ 175 (538)
... .+.+....+++++.+.
T Consensus 143 ~~~~~~~~~l~~~~~~~~~~~~ 164 (173)
T PRK06769 143 DALHTYRDKWAHIEPNYIAENF 164 (173)
T ss_pred hhhhhhhcccccCCCcchhhCH
Confidence 321 1234445677777553
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=175.40 Aligned_cols=125 Identities=10% Similarity=-0.004 Sum_probs=102.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---ee--cCCCCHHHHHHHHHHcCCC-C
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---EI--YPGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e~--~~~~Kp~~f~~ale~lgi~-P 124 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+++..+| +.+ +. ..+++|++|..+++++|+. |
T Consensus 98 ~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~-~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~ 176 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARGIKIGSTTGYTR-EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDV 176 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCC
Confidence 4568999999999999999999999999988 8889999999888875 655 22 2335578999999999996 6
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc----h----------------HhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS----G----------------RLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~----~----------------~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|+||||+.+|+++|+++|+.+|+|.+|... . ...+.+...++++++.+..+
T Consensus 177 ~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~ 249 (267)
T PRK13478 177 AACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIAD 249 (267)
T ss_pred cceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHH
Confidence 99999999999999999999999999998752 0 01234556688988877443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-18 Score=181.94 Aligned_cols=124 Identities=11% Similarity=0.111 Sum_probs=105.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+..||+.+.. ..+++|++|..+++++|+.|++
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee 291 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER 291 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3467999999999999999999999999998 999999999999999998722 2345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHh
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVND 182 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~ 182 (538)
|+||||+..|+++|+++||.+|+|.++..... + ..+++++.+..+..+..
T Consensus 292 cl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~----l--~~Ad~iI~s~~EL~~~~ 341 (381)
T PLN02575 292 CIVFGNSNQTVEAAHDARMKCVAVASKHPIYE----L--GAADLVVRRLDELSIVD 341 (381)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCChhH----h--cCCCEEECCHHHHHHHH
Confidence 99999999999999999999999987643221 2 24788888766655543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=170.93 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=91.3
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eecC--CCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIYP--GQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~~--~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+..+|+.+ +..+ +++|++|..+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHP-HNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCH-HHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 4478999999999999999999999999988 8899999999999999977 2233 34568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCe-EEEECCCCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVT-CIHSWLMMSS 156 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~-tI~V~~G~~~ 156 (538)
|+||||+..|+++|+++||. +++|.++...
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 99999999999999999997 5778776543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-18 Score=164.95 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=90.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+.++|+.+. .. .+++|++|..+++++|++|++
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~ 167 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSP-AMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE 167 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhh
Confidence 3567899999999999999999999999988 88999999999999999772 22 244568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|++|||+..|+++|+++|+.+|+|..+
T Consensus 168 ~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 168 VLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 999999999999999999999999753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-18 Score=172.93 Aligned_cols=122 Identities=19% Similarity=0.282 Sum_probs=103.2
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+++..+|+.+.. .+ +++|++|+.+++++|++|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~-~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPE-RFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcH-HHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 357899999999999999999999999988 889999999999999997622 22 345689999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
++|||+.+|+++|+++|+.+++|.+|......... ..+++++.+..+.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~---~~~~~vi~~l~el 225 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAE---ESPALVIDDLRAL 225 (272)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhh---cCCCEEECCHHHH
Confidence 99999999999999999999999998765444322 4688888765443
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.7e-18 Score=163.92 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=102.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||+.. ......++.+|+..+|+.+.. . .+++|++|..++++++++|++|
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 577999999999999999999999999988 888999999999999987621 1 2346789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++|||+.+|+.+|+++|+.+++|.+|....... ....|++++.+..
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~---~~~~~~~~i~~~~ 215 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPI---ALSEPDVVIDHFA 215 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCCCccch---hhcCCCEEECCHH
Confidence 999999999999999999999999987644332 2346888886643
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.3e-18 Score=178.48 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=108.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH-HcCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN-LINLNQYFSNKE---I--YPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~-~lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P 124 (538)
.....++||+.++|+.|+++|++++|+||++. ..+...++ ..|+.++|+.+. . ..+++|++|..+++++|++|
T Consensus 89 ~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~-~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p 167 (382)
T PLN02940 89 WCNIKALPGANRLIKHLKSHGVPMALASNSPR-ANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP 167 (382)
T ss_pred HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCCh
Confidence 34577999999999999999999999999988 88888887 789999999872 2 23455699999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhhcCCcccccccc
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISKLGVTATRKDSK 196 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~~g~~~~~~~~~ 196 (538)
++|++|||+..|+++|+++|+.+|+|.++..... ....++.++.+..+.... +.|+. ...||-
T Consensus 168 ~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~-----~~~~ad~~i~sl~el~~~---~~~~~-~~~~~~ 230 (382)
T PLN02940 168 SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTH-----LYSSADEVINSLLDLQPE---KWGLP-PFNDWI 230 (382)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchh-----hccCccEEeCCHhHcCHH---HcCCC-Cccccc
Confidence 9999999999999999999999999998754322 123578877765543322 25553 456664
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=162.40 Aligned_cols=116 Identities=12% Similarity=0.019 Sum_probs=94.2
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCC-Cc
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEY-KD 126 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P-~e 126 (538)
...++||+.++|+.|+ +|++++|+||+.. ..++..++.+|+.++|+.+.. ..+++|++|..+++++|+.| ++
T Consensus 93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred cCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 4679999999999999 6799999999988 888999999999999998722 23455689999999999855 89
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+||||+. .|+++|+++|+.++++.++... ......+++++.+.
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~-----~~~~~~~~~~i~~~ 215 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNAHGRE-----QPEGIAPTYQVSSL 215 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECCCCCC-----CCCCCCCeEEECCH
Confidence 99999998 6999999999999999854211 11123467776553
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=158.36 Aligned_cols=97 Identities=13% Similarity=0.191 Sum_probs=85.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|+ .++|+.|+++ ++++|+||++. ..++..++.+|+.+||+.+. .. .+++|++|..+++++|++|++
T Consensus 85 ~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~-~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 161 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGR-RPMAVGTGSES-AIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161 (188)
T ss_pred ccCCCccH-HHHHHHHHhC-CCEEEEcCCch-HHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHH
Confidence 45678885 6999999876 89999999988 99999999999999999872 22 345568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
|++|||+..|+++|+++|+++|+|.
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 162 CVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred eEEEeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999999985
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=158.64 Aligned_cols=142 Identities=14% Similarity=-0.026 Sum_probs=104.5
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc------------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE------------ 82 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~------------ 82 (538)
|+|+++||+||||...- .. +........++||+.++|++|+++|++++|+||++.
T Consensus 2 ~~~~~~~d~~~t~~~~~-~~------------~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 2 SMKAIFLDRDGVINVDS-DG------------YVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred CccEEEEECCCCcccCC-cc------------ccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 68999999999993211 00 111123567999999999999999999999999862
Q ss_pred --HHHHHHHHHHcCCCCCCccee----------ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 83 --ILHAKQILNLINLNQYFSNKE----------IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 83 --p~~~~~~L~~lgL~~~Fd~ie----------~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
.......++.+|+ +|+.+. ...+++|++|..+++++|++|++|+||||+..|+.+|+++|+.++++
T Consensus 69 ~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v 146 (181)
T PRK08942 69 ALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLV 146 (181)
T ss_pred HHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEE
Confidence 0233455666775 354331 12345568999999999999999999999999999999999999999
Q ss_pred CCCCCchHhHHhhCCCCC--CEEEeCC
Q psy8912 151 WLMMSSGRLKEATGIDYK--DMIYFDD 175 (538)
Q Consensus 151 ~~G~~~~~~~~~l~~~~~--d~Ii~d~ 175 (538)
.+|...... ....+ ++++.+.
T Consensus 147 ~~g~~~~~~----~~~~~~~~~ii~~l 169 (181)
T PRK08942 147 RTGKGVTTL----AEGAAPGTWVLDSL 169 (181)
T ss_pred cCCCCchhh----hcccCCCceeecCH
Confidence 988754322 12234 7776653
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-17 Score=156.57 Aligned_cols=96 Identities=18% Similarity=0.240 Sum_probs=85.0
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---I--YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||+.. ....++.+|+..+|+.+. . .++++|++|..++++++++|++|
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSEC 161 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 357899999999999999999999999755 567899999999999862 1 23456799999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
+||||+..|+++|+++||++|+|.
T Consensus 162 v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 162 IGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=159.31 Aligned_cols=116 Identities=9% Similarity=0.004 Sum_probs=97.4
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHc-CCCCCc
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKAT-GIEYKD 126 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~l-gi~P~e 126 (538)
..+++||+.++|+.|+++ ++++|+||+.. ..++..++.+++..+|+.+.. . .+++|++|..+++++ |++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~-~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVR-ETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCch-HHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 468999999999999999 99999999988 899999999999999998722 1 245668999999999 999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+||||+. .|+++|+++|+++|++.++.... .....+++++.+.
T Consensus 173 ~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~-----~~~~~~~~~~~~~ 217 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQNAGLDTCWMNPDMHPN-----PDDIIPTYEIRSL 217 (224)
T ss_pred eEEECCCcHHHHHHHHHCCCcEEEECCCCCCC-----CCCCCCceEECCH
Confidence 99999998 79999999999999998865432 1123566666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=156.17 Aligned_cols=139 Identities=15% Similarity=0.086 Sum_probs=103.5
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------- 83 (538)
|+++||.||||.... .+. .......++||+.++|+.|+++|++++|+||++..
T Consensus 2 ~~~~~D~Dgtl~~~~--~~~------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~ 67 (176)
T TIGR00213 2 KAIFLDRDGTINIDH--GYV------------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQL 67 (176)
T ss_pred CEEEEeCCCCEeCCC--CCC------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHH
Confidence 689999999996311 000 01235779999999999999999999999999741
Q ss_pred -HHHHHHHHHcCCCCCCccee--------------e--cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 84 -LHAKQILNLINLNQYFSNKE--------------I--YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~Fd~ie--------------~--~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
......+..+++. |+.+- . ..+++|++|..+++++|++|++|+||||+..|+++|+++|+.
T Consensus 68 ~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~ 145 (176)
T TIGR00213 68 TEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVK 145 (176)
T ss_pred HHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCc
Confidence 2334566666654 33321 1 234567999999999999999999999999999999999999
Q ss_pred E-EEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 147 C-IHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 147 t-I~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+ ++|.+|..... .....+|+++.+.
T Consensus 146 ~~i~v~~g~~~~~----~~~~~ad~~i~~~ 171 (176)
T TIGR00213 146 TNVLVRTGKPITP----EAENIADWVLNSL 171 (176)
T ss_pred EEEEEecCCcccc----cccccCCEEeccH
Confidence 8 89999865322 2224588888653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-17 Score=150.45 Aligned_cols=120 Identities=22% Similarity=0.138 Sum_probs=96.4
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC--------cHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------EILHAKQ 88 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~--------~p~~~~~ 88 (538)
|+++||+|||||+.- .+ ........++||+.++|+.|+++|++++++||++ . ...+.
T Consensus 1 k~~~~D~dgtL~~~~--~~------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~-~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDV--PY------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSS-GRVAR 65 (132)
T ss_pred CEEEEeCCCceecCC--CC------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHH-HHHHH
Confidence 689999999999520 00 0011235789999999999999999999999998 6 77888
Q ss_pred HHHHcCCCCCCcce-eecCCCCHHHHHHHHHHc-CCCCCcEEEEeC-CcccHHHHhhcCCeEEEEC
Q psy8912 89 ILNLINLNQYFSNK-EIYPGQKTTHFESLKKAT-GIEYKDMVFFDD-EERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 89 ~L~~lgL~~~Fd~i-e~~~~~Kp~~f~~ale~l-gi~P~e~L~IGD-s~~DI~aAk~aG~~tI~V~ 151 (538)
.++.+++..+|... ....+++|++|..+++++ +++|++|+|||| +..|+.+|+++|+.+|+++
T Consensus 66 ~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 66 RLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred HHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 99999986333322 112355679999999999 599999999999 6999999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-17 Score=155.35 Aligned_cols=96 Identities=20% Similarity=0.261 Sum_probs=85.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++++||+ ..++..++.+|+.++|+.+.. ..+++|++|..+++++|++|++
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS---KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNE 161 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 34789999999999999999999999998 347889999999999997622 2345568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
|++|||+..|+++|+++|+++|+|
T Consensus 162 ~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-17 Score=150.21 Aligned_cols=99 Identities=19% Similarity=0.318 Sum_probs=89.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..+...++.+|+..+|+.+.. .+ +++|+.|..+++++|++|+
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~ 151 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE 151 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc
Confidence 46788999999999999999999999999987 899999999999999997722 22 3445899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
+|+||||+..|+++|+++|+.+|+|
T Consensus 152 ~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 152 EILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred eEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 9999999999999999999999986
|
... |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.3e-17 Score=164.47 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=102.8
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC---cce--eec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF---SNK--EIY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F---d~i--e~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
+.++||+.++|+.|+++|++++|+||++. ..+...++.++...+| +.+ +.. .+++|++|..+++++|++|++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNE-KAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 57999999999999999999999999988 8888888877433344 332 222 234568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhhc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISKL 186 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~~ 186 (538)
|+||||+..|+++|+++||.+|+|.+|...... + ..+|+++.+..+..+.+...+
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~---l--~~ad~vi~~~~~l~~~~~~~~ 276 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADED---F--SGADAVFDCLGDVPLEDFDLL 276 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCccccc---c--CCCcEEECChhhcchhhhHHH
Confidence 999999999999999999999999998765432 2 367999888777777665544
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7e-17 Score=157.90 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=86.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc-e---eecC--CCCHHHHHHHHHHcCCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-K---EIYP--GQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~-i---e~~~--~~Kp~~f~~ale~lgi~P~ 125 (538)
....++||+.++|+.| +++++|+||++. ..++..++.+|+.++|+. + +..+ +++|++|..+++++|++|+
T Consensus 85 ~~~~~~~gv~~~L~~L---~~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~ 160 (221)
T PRK10563 85 SELEPIAGANALLESI---TVPMCVVSNGPV-SKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVE 160 (221)
T ss_pred ccCCcCCCHHHHHHHc---CCCEEEEeCCcH-HHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHH
Confidence 4578999999999999 389999999988 889999999999999963 3 1122 3456999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+|+||||+..|+++|+++|+.++++..+.
T Consensus 161 ~~l~igDs~~di~aA~~aG~~~i~~~~~~ 189 (221)
T PRK10563 161 NCILVDDSSAGAQSGIAAGMEVFYFCADP 189 (221)
T ss_pred HeEEEeCcHhhHHHHHHCCCEEEEECCCC
Confidence 99999999999999999999999997543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-17 Score=150.69 Aligned_cols=125 Identities=14% Similarity=0.062 Sum_probs=95.9
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------- 83 (538)
++++||+||||.......+. ......+++||+.++|+.|+++|++++|+||++..
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~ 68 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAP 68 (147)
T ss_pred CeEEEeCCCceeccCCcccC------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHH
Confidence 47999999999542211111 01124579999999999999999999999998630
Q ss_pred -HHHHHHHHHcCCCC--CCcce----e--ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 84 -LHAKQILNLINLNQ--YFSNK----E--IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 84 -~~~~~~L~~lgL~~--~Fd~i----e--~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
..+...++.+|+.. +|... + ...+++|++|..+++++|++|++|+||||+..|+++|+++|+.+|++..|
T Consensus 69 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 69 NGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 34566788888862 22211 1 12356679999999999999999999999999999999999999999765
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-17 Score=175.73 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=98.7
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee----cCCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI----YPGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~----~~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+|+..||+.+.. ..++||++|..++++++ |++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~-~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLT-EYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEE
Confidence 468999999999999999999999999999 999999999999999998722 22478999999998864 78999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|||+.+|+++|+++|+.+|++.++...... . ..+|+++.+..
T Consensus 405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~---~--~~~d~~i~~l~ 447 (459)
T PRK06698 405 VVGDRLSDINAAKDNGLIAIGCNFDFAQEDE---L--AQADIVIDDLL 447 (459)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEeCCCCcccc---c--CCCCEEeCCHH
Confidence 9999999999999999999999998654332 1 25788876643
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.1e-17 Score=157.75 Aligned_cols=108 Identities=16% Similarity=0.116 Sum_probs=87.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHH--HHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILH--AKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~--~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~ 125 (538)
...++||+.++|+.|+++|++++|+||++. .. ....+...++.++|+.+.. . .++.|++|..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~-~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFP-TDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCC-ccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 467899999999999999999999999865 33 3333445677789997622 2 34556899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHH
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKE 161 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~ 161 (538)
+|+||||+..|+.+|+++|+.+|++.++......+.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~~l~ 206 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVSDEEQAIHDLE 206 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999987655444443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=154.65 Aligned_cols=108 Identities=20% Similarity=0.187 Sum_probs=90.2
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKE---I--YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
..++||+.++|+.|+++|++++|+||++. ......+.. .++..+|+.+. . ..+++|++|..+++++|++|++|
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCch-hhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 45899999999999999999999999987 665555544 36778898762 2 23456799999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
+||||+..|+++|+++|+.++++.++.+..+.++.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHh
Confidence 99999999999999999999999987766655543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-16 Score=150.80 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=83.5
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
..++||+.++|+.|+++|++++++||++. .. ...+.++|+.++|+.+.. . ++++|++|..+++++|++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~-~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPR-DH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCch-HH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 68999999999999999999999999988 66 666666999999998622 2 33456899999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEE
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V 150 (538)
+|||+..|+.+|+++|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.4e-16 Score=150.97 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=82.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecC--CCCHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYP--GQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~--~~Kp~~f~~ale~lgi~P~e~L 128 (538)
..++||+.++|+.|+++|++++|+||++. . .+..++.+|+..+|+.+. ..+ +++|++|..+++++|++|++|+
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDS-R-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCch-h-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 47899999999999999999999999865 4 578899999999999872 222 3456889999999999999999
Q ss_pred EEeCCc-ccHHHHhhcCCeEEE
Q psy8912 129 FFDDEE-RNSHDVSPLGVTCIH 149 (538)
Q Consensus 129 ~IGDs~-~DI~aAk~aG~~tI~ 149 (538)
+|||+. .|+++|+++|+.+|+
T Consensus 182 ~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHHcCCeeeC
Confidence 999997 799999999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-16 Score=150.02 Aligned_cols=100 Identities=20% Similarity=0.186 Sum_probs=81.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC----cce--eecCCCCHHHHHHHHHHcCCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF----SNK--EIYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F----d~i--e~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
....++||+.++|+.|+++ ++++++||.+. ......++.+++..+| +.+ .....+||++|..+++++| |+
T Consensus 71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~-~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 71 RYLSAYDDALDVINKLKED-YDFVAVTALGD-SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred HhccCCCCHHHHHHHHHhc-CCEEEEeCCcc-chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence 4567999999999999987 46788898766 5566677778776544 444 1123458999999999999 89
Q ss_pred cEEEEeCCcccHHHHhhc--CCeEEEECCCCC
Q psy8912 126 DMVFFDDEERNSHDVSPL--GVTCIHSWLMMS 155 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~a--G~~tI~V~~G~~ 155 (538)
+|+||||+..|+++|+++ |+++|++.||..
T Consensus 147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred cEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 999999999999999999 999999998853
|
2 hypothetical protein; Provisional |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-16 Score=148.08 Aligned_cols=118 Identities=16% Similarity=0.090 Sum_probs=101.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC-cHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-EILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~-~p~~~~~~L~~l 93 (538)
.+++|++|+||||+. .....++||+.++|+.|+++|++++|+||++ . ..+...++.+
T Consensus 24 ~v~~vv~D~Dgtl~~---------------------~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~-~~~~~~~~~~ 81 (170)
T TIGR01668 24 GIKGVVLDKDNTLVY---------------------PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGE-QRAKAVEKAL 81 (170)
T ss_pred CCCEEEEecCCcccc---------------------CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchH-HHHHHHHHHc
Confidence 479999999999986 2355799999999999999999999999998 5 6677777788
Q ss_pred CCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchH
Q psy8912 94 NLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 94 gL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
++..++. ..+++|++|..+++++|++|++|+||||+. .|+.+|+++|+.+|+|.+|....+
T Consensus 82 gl~~~~~----~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~ 143 (170)
T TIGR01668 82 GIPVLPH----AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQ 143 (170)
T ss_pred CCEEEcC----CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCcc
Confidence 8654332 235677999999999999999999999998 699999999999999999886554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.9e-16 Score=148.58 Aligned_cols=94 Identities=20% Similarity=0.310 Sum_probs=83.6
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c------CCCCHHHHHHHHHHcCCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y------PGQKTTHFESLKKATGIE 123 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~------~~~Kp~~f~~ale~lgi~ 123 (538)
...++||+.++|+.|+ ++++|+||++. ..+...++.+|+..+|+.+.. . ++++|++|..+++++|++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~-~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDR-AHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCH-HHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 4568999999999998 47999999988 899999999999999997721 1 255678999999999999
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
|++|+||||+..|+++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.6e-16 Score=153.70 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=82.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++ ++++++||++. . ++.+|+..+|+.+.. ..+++|++|..+++++|++|++
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~-~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 182 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNA-Q-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGE 182 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCc-h-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhH
Confidence 3477899999999999976 99999999876 3 478899999998722 2245678999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~ 154 (538)
|+||||+. .|+.+|+++|++++++..+.
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~~ 211 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPEN 211 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence 99999994 99999999999999998654
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-15 Score=148.72 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=89.5
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eecC--CCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIYP--GQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~~--~~Kp~~f~~ale~lgi~P~e~ 127 (538)
..+++|++.++|+.|+++ ++++++||+.. ..+...+..+|+.++||.+ +..+ ++.|++|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~-~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGAR-PHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCCh-HHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478999999999999999 99999999878 8999999999999999987 2333 344589999999999999999
Q ss_pred EEEeCCcc-cHHHHhhcCCeEEEECCCCC
Q psy8912 128 VFFDDEER-NSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 128 L~IGDs~~-DI~aAk~aG~~tI~V~~G~~ 155 (538)
+||||+.. ||.+|+++||++|++..+..
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~ 203 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGK 203 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCC
Confidence 99999975 66999999999999987654
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.8e-16 Score=150.15 Aligned_cols=96 Identities=21% Similarity=0.271 Sum_probs=84.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----------ee-----cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----------EI-----YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----------e~-----~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++..++.+|+..+|+.. .. .+.+||.+|..
T Consensus 81 ~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 159 (219)
T TIGR00338 81 RENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLI 159 (219)
T ss_pred HhcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHH
Confidence 44567999999999999999999999999988 8999999999998888531 01 12348899999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
++++++++|++|+||||+.+|+.+|+++|+..
T Consensus 160 ~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 160 LLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 99999999999999999999999999999974
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-15 Score=150.03 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=86.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---CCCCCCcce---eecCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNK---EIYPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---gL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P 124 (538)
.....+|||+.++|+.|+++|++++|+||++. ..+...++.. ++..+|+.. ....+++|++|..+++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~-~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSV-PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 44567999999999999999999999999988 7777777765 455555543 2334566799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
++|+||||+..|+++|+++||.++++.++.
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999997644
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.1e-16 Score=145.78 Aligned_cols=124 Identities=19% Similarity=0.131 Sum_probs=98.7
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC---------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------- 81 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~--------------- 81 (538)
|+++||.||||+...-..+ .........++||+.++|+.|+++|++++|+||.+
T Consensus 2 ~~~~~d~dg~l~~~~~~~~-----------~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~ 70 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDF-----------QVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGP 70 (161)
T ss_pred CEEEEeCCCCccccCCCcc-----------ccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHH
Confidence 6899999999976221000 01113357899999999999999999999999973
Q ss_pred cHHHHHHHHHHcCCCCCCcceee----------cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 82 EILHAKQILNLINLNQYFSNKEI----------YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 82 ~p~~~~~~L~~lgL~~~Fd~ie~----------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
. ..+...++.+|+. |+.+-. ..+++|++|..++++++++|++|+||||+..|+.+|+++|+.++++.
T Consensus 71 ~-~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 71 H-NLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred H-HHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 3 5678889999986 653311 12345689999999999999999999999999999999999999998
Q ss_pred CCC
Q psy8912 152 LMM 154 (538)
Q Consensus 152 ~G~ 154 (538)
++.
T Consensus 148 ~~~ 150 (161)
T TIGR01261 148 EEE 150 (161)
T ss_pred hhh
Confidence 764
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-15 Score=153.39 Aligned_cols=106 Identities=11% Similarity=0.161 Sum_probs=92.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++.+. .++..|+++||.+||+.+.... .++++.|+++++++|++|++
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~-~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRE-NAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 45789999999999999999999999999754 8899999999999999533322 24567799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
|+||||+..|+++|+++|+.+|+|.||.....
T Consensus 184 ~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~ 215 (248)
T PLN02770 184 TFVFEDSVSGIKAGVAAGMPVVGLTTRNPESL 215 (248)
T ss_pred EEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHH
Confidence 99999999999999999999999999865443
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-15 Score=138.48 Aligned_cols=115 Identities=28% Similarity=0.389 Sum_probs=91.1
Q ss_pred ceEEEeCCCCCChhhHhhhh-chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC-
Q psy8912 17 KMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN- 94 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg- 94 (538)
|+++||+|||||+.+..... .+ .... . .++||+.++|+.|+++|++++++||++.+..+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~-------~~~~---~-~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDP-------IIDL---E-VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCc-------chhh---H-HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 68999999999985432111 00 0000 0 6899999999999999999999999943388888899888
Q ss_pred ------CCCCCcceeec-CCCCHHHHHHHHHHcC--CCCCcEEEEeCCcccHHHHhh
Q psy8912 95 ------LNQYFSNKEIY-PGQKTTHFESLKKATG--IEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 95 ------L~~~Fd~ie~~-~~~Kp~~f~~ale~lg--i~P~e~L~IGDs~~DI~aAk~ 142 (538)
+.++|+.+... ..++|++|..+++++| ++|++|+||||+..|+.+.++
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 78899986333 3467899999999999 999999999999999887654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-15 Score=150.38 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=92.5
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIE 491 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~ 491 (538)
.....+.++|||.++|++|+++|+++|++|++.+. .++..|+.+|+.+||+...... .+.|+.|+.++++||++
T Consensus 80 ~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~-~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 80 LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRR-AAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHH-HHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 44556889999999999999999999999999754 8899999999999999422211 24577799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++||+||||.+||+||++|||.||+|+.+.+
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999999998554
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-15 Score=140.95 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=90.7
Q ss_pred CceEEEeCCCCCChhhHh-hhhchhHHHHHHHHhhhcCCCc-cCCCHHHHHHHhhhCCceEEEEcCCCcH----------
Q psy8912 16 PKMVVFDLDYTLWPLHVH-DLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI---------- 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~-~~i~~~~~~~~~i~~~~~~~~~-l~pgv~elL~~Lk~~GikiaIvTn~~~p---------- 83 (538)
.|+++||+|||||...-. .+. .....++ +|||+.++|+.|+++|++++|+||++..
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~ 80 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFP------------TSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESF 80 (166)
T ss_pred CcEEEEeCCCceEecCCCCccc------------CChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHH
Confidence 589999999999762100 000 0012233 6899999999999999999999998651
Q ss_pred -HHHHHHHHHcCCCCCCcce--e--ecCCCCHHHHHHHHHHcC--CCCCcEEEEeCCc--------ccHHHHhhcCCeEE
Q psy8912 84 -LHAKQILNLINLNQYFSNK--E--IYPGQKTTHFESLKKATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTCI 148 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~Fd~i--e--~~~~~Kp~~f~~ale~lg--i~P~e~L~IGDs~--------~DI~aAk~aG~~tI 148 (538)
..++.+++.+|+.. +..+ . ...+++|++|..+++++| ++|++|+||||+. .|+++|+++|+.++
T Consensus 81 ~~~i~~~l~~~gl~~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~ 159 (166)
T TIGR01664 81 KNKIEAFLEKLKVPI-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFK 159 (166)
T ss_pred HHHHHHHHHHcCCCE-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcC
Confidence 14677899999853 2221 1 122345689999999999 9999999999996 69999999999975
Q ss_pred E
Q psy8912 149 H 149 (538)
Q Consensus 149 ~ 149 (538)
+
T Consensus 160 ~ 160 (166)
T TIGR01664 160 Y 160 (166)
T ss_pred C
Confidence 4
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.9e-15 Score=149.90 Aligned_cols=104 Identities=9% Similarity=-0.034 Sum_probs=90.1
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-ccceee-----cCCchHHHHHHHHHhCCC-
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEIF-----PGQKTTHFANLKKATGIE- 491 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~~i~-----~~~k~~~~~kal~~lgi~- 491 (538)
...+.++||+.++|++|+++|++++|+|++.. +.++.+|+++|+.+|| +.+... ..++++.|+++++++|+.
T Consensus 95 ~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 95 AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred HhcCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 34578999999999999999999999999875 4888999999999996 632221 114577799999999995
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|+||||+.+|+++|++||+.+|+|.||..
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 99999999999999999999999999999874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.6e-15 Score=140.87 Aligned_cols=102 Identities=19% Similarity=0.103 Sum_probs=85.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---------------cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---------------~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++.+++.+|+..+|+.... .+.+|++.+..
T Consensus 76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIM-CLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER 154 (201)
T ss_pred HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence 34567899999999999999999999999988 999999999998877764311 11234467889
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
+++++|++|++|+||||+.+|+.+|+.+|+.++..+.+
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 99999999999999999999999999999976654433
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.3e-15 Score=143.18 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=91.8
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p 492 (538)
+.....++||+.++|++|+++|++++|+|++.. ..++..|+++|+.+||+...... .++++.|.++++++|++|
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 158 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAP 158 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCCh
Confidence 444578999999999999999999999999875 48889999999999999432221 134677999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|+||||+.+|+++|+++|+.+++|.||..
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~ 189 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYR 189 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence 9999999999999999999999999999865
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-14 Score=140.05 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=89.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC--CCCcce-e----------------ecCCCCHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNK-E----------------IYPGQKTTHF 113 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~--~~Fd~i-e----------------~~~~~Kp~~f 113 (538)
...++||+.++|+.|+++|++++|+|++.. ..++.+++.+|+. .+|... . ..+.+||+.+
T Consensus 82 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i 160 (224)
T PLN02954 82 PPRLSPGIPELVKKLRARGTDVYLVSGGFR-QMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAV 160 (224)
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHH
Confidence 356899999999999999999999999998 9999999999996 356421 0 0123588999
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+.+++++|. ++|+||||+.+|+.+|+++|+.++...++....... ...+++++.+.
T Consensus 161 ~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~ 216 (224)
T PLN02954 161 QHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAV----AAKADWFVTDF 216 (224)
T ss_pred HHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHH----HhcCCEEECCH
Confidence 999998885 699999999999999999888866544333222221 23578887653
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.9e-15 Score=135.16 Aligned_cols=91 Identities=20% Similarity=0.236 Sum_probs=79.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee----ecCCCCHHHHHHHHHHcCCCCCc
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE----IYPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie----~~~~~Kp~~f~~ale~lgi~P~e 126 (538)
......+||+.++|+.|+++|++++|+||++. ..+...++.+ +..+|+.+. ...+++|++|..+++++|++| +
T Consensus 60 ~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~ 136 (154)
T TIGR01549 60 DAEEAYIRGAADLLKRLKEAGIKLGIISNGSL-RAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-E 136 (154)
T ss_pred chhheeccCHHHHHHHHHHCcCeEEEEeCCch-HHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-C
Confidence 34556789999999999999999999999988 8888888887 778888762 223456799999999999999 9
Q ss_pred EEEEeCCcccHHHHhhcC
Q psy8912 127 MVFFDDEERNSHDVSPLG 144 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG 144 (538)
|+||||+..|+++|+++|
T Consensus 137 ~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 137 VLHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEEeCCHHHHHHHHHcc
Confidence 999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.1e-15 Score=146.98 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=90.9
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~p 492 (538)
+...+.++||+.++|++|+++|++++|+||+... .++..|+++|+.+||+.+.+. .. ++++.|+++++++|++|
T Consensus 88 ~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~-~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p 166 (224)
T PRK14988 88 QGPRAVLREDTVPFLEALKASGKRRILLTNAHPH-NLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA 166 (224)
T ss_pred HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHH-HHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh
Confidence 4456889999999999999999999999998754 778889999999999943321 12 34677999999999999
Q ss_pred CcEEEEecccccHHhHcccCCE-EEEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVT-CIHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~-~i~V~dg~t~ 524 (538)
++|+||||+..|+++|+++|+. +++|+++.+.
T Consensus 167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 9999999999999999999997 6889987653
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.8e-15 Score=145.34 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=90.1
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~l 496 (538)
..+|||+.++|.+|+++|++++|+|++++. .++.+|+++|+.+||+...... . +++.++..+++++|++|++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~-~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPER-ELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHH-HHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 589999999999999999999999999865 8899999999999999543312 2 346668999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
||||+.+|+++|++||+.+++|.||.+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~ 193 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYN 193 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCC
Confidence 999999999999999999999999985
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-14 Score=144.68 Aligned_cols=133 Identities=11% Similarity=0.043 Sum_probs=97.5
Q ss_pred eEEEeCCCCCChhhHh-hhh-chhHH----------HHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCC----C
Q psy8912 18 MVVFDLDYTLWPLHVH-DLV-APFKK----------IGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT----S 81 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~-~~i-~~~~~----------~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~----~ 81 (538)
+|+||+||||.++.-. .+. +.+.. .+..+.........+++++.++|+.|+++|++++++||+ .
T Consensus 65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~ 144 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT 144 (237)
T ss_pred EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence 9999999999654421 111 11111 112222223455677888999999999999999999998 4
Q ss_pred cHHHHHHHHHHcCCCCCCcce---eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCc
Q psy8912 82 EILHAKQILNLINLNQYFSNK---EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 82 ~p~~~~~~L~~lgL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
. ..++.+++.+|+.++|+.+ +....+||+.. .+++++++ ++||||+.+|+.+|+++|+.++.|.||...
T Consensus 145 ~-~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 145 D-TVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred H-HHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 5 6788889999999999875 11222456554 45677776 899999999999999999999999988754
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=140.20 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=77.5
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee----ecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE----IYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie----~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
.+.+++.++|+.|+++|++++|+||++. ..++..++.+|+..+|+.+. ...+++|+.|..+++++|++|++|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPR-KDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCH-HHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 3445669999999999999999999988 99999999999999999762 123556789999999999999999999
Q ss_pred eCCcccHHHHhhc
Q psy8912 131 DDEERNSHDVSPL 143 (538)
Q Consensus 131 GDs~~DI~aAk~a 143 (538)
||+.+|+.+|+++
T Consensus 185 GD~~~Di~aA~~a 197 (197)
T TIGR01548 185 GDTVDDIITGRKA 197 (197)
T ss_pred eCCHHHHHHHHhC
Confidence 9999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.1e-15 Score=141.51 Aligned_cols=104 Identities=17% Similarity=0.211 Sum_probs=91.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++... .++..|+++|+.+||+..... ..++++.|+++++++|++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGP-RARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 35789999999999999999999999998754 788899999999999943221 124577799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+||||+.+|+++|+++|+.+++|.||...
T Consensus 151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~ 180 (205)
T TIGR01454 151 AVMVGDAVTDLASARAAGTATVAALWGEGD 180 (205)
T ss_pred eEEEcCCHHHHHHHHHcCCeEEEEEecCCC
Confidence 999999999999999999999999999743
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.5e-15 Score=145.21 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=91.3
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p 492 (538)
+.....++||+.++|++|+++|++++|+|+++. ..++..|+++|+.+||+...... .++++.|.++++++|++|
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p 168 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAP 168 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCCh
Confidence 334578999999999999999999999999875 47788999999999999432211 245677999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.+|+|.||..
T Consensus 169 ~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 199 (229)
T PRK13226 169 TDCVYVGDDERDILAARAAGMPSVAALWGYR 199 (229)
T ss_pred hhEEEeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence 9999999999999999999999999999874
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.5e-15 Score=142.31 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=91.4
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++... .+...|+.+|+.+||+.+.... .++++.|.++++++|++|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~-~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMRD-TVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 45779999999999999999999999998754 7888999999999999533221 24577799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+||||+.+|+++|+++|+.+++|.||...
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~ 187 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKG 187 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCCC
Confidence 999999999999999999999999998643
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=153.56 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=92.3
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++|+|+++. ..++.+|+++||.+||+.+.... .++++.|+.+++++|++|+
T Consensus 212 ~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pe 290 (381)
T PLN02575 212 GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPE 290 (381)
T ss_pred ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcc
Confidence 34578999999999999999999999999975 48899999999999999533222 1356779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+|+||||+..||++|+++|+++|+|.++....
T Consensus 291 ecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~ 322 (381)
T PLN02575 291 RCIVFGNSNQTVEAAHDARMKCVAVASKHPIY 322 (381)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECCCCChh
Confidence 99999999999999999999999999875444
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=142.20 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=92.5
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~p 492 (538)
......++||+.++|++|+++|++++|+|++... .++..++.++|.+||+..... ..++++.|+.+++++|++|
T Consensus 87 ~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~-~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 165 (222)
T PRK10826 87 IEETRPLLPGVREALALCKAQGLKIGLASASPLH-MLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDP 165 (222)
T ss_pred HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHH-HHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCH
Confidence 3445789999999999999999999999998754 788899999999999953332 1255778999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|++|||+.+|+++|+++|+.+|+|+++...
T Consensus 166 ~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~ 197 (222)
T PRK10826 166 LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ 197 (222)
T ss_pred HHeEEEcCChhhHHHHHHcCCEEEEecCCccC
Confidence 99999999999999999999999999987544
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-14 Score=146.59 Aligned_cols=100 Identities=11% Similarity=0.152 Sum_probs=88.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++... .++.+|+++||.+||+.+.... .++++.|+++++++|++|++
T Consensus 106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~-~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~ 184 (260)
T PLN03243 106 GLYRLRPGSREFVQALKKHEIPIAVASTRPRR-YLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPER 184 (260)
T ss_pred cCcccCCCHHHHHHHHHHCCCEEEEEeCcCHH-HHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHH
Confidence 35789999999999999999999999998754 8899999999999999533222 23466799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
|+||||+..|+++|+++|+.+|+|.+
T Consensus 185 ~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 185 CIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 99999999999999999999999974
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-14 Score=138.77 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=86.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch-------HHHHHHHhhcCCcccccccee------ecCCchHHHHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM-------LRAHQLVDLFNWNQHFDHKEI------FPGQKTTHFANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~-------~~a~~~L~~lgL~~yFd~~~i------~~~~k~~~~~kal~~ 487 (538)
.+.++|||.++|++|+++|++++|+|+++.. ......++.+|+.+||.+... ...++++.|++++++
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 4679999999999999999999999987531 023445888999888864321 123567789999999
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++++|++|+||||+..|+++|+++|+.+|+|.||...
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 9999999999999999999999999999999998643
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-14 Score=146.88 Aligned_cols=107 Identities=13% Similarity=0.210 Sum_probs=93.9
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcE
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~ 495 (538)
+...+.++||+.++|++|+++|++++|+|++..+ .+...|+++||.+||+.+..... .|++.|.+++++++++|++|
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~-~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~ 215 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQ-NIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAV 215 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHE
Confidence 3456789999999999999999999999999754 88999999999999995322222 46788999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+||||+..|+++|++||+.+|+|+||....
T Consensus 216 l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~ 245 (273)
T PRK13225 216 MYVGDETRDVEAARQVGLIAVAVTWGFNDR 245 (273)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCCCH
Confidence 999999999999999999999999997654
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-14 Score=133.67 Aligned_cols=101 Identities=14% Similarity=0.133 Sum_probs=83.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc--------------hHHHHHHHhhcCCcc---ccccc---e-e-ecCCch
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE--------------MLRAHQLVDLFNWNQ---HFDHK---E-I-FPGQKT 478 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~--------------~~~a~~~L~~lgL~~---yFd~~---~-i-~~~~k~ 478 (538)
...++||+.++|++|+++|++++|+|++++ ...+...|+++|+.. ||... . . ...+++
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCH
Confidence 356999999999999999999999998863 135677899999872 33211 1 1 123678
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+.|+.+++++|++|++|+||||+..|+++|+++|+++|.|++|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 8899999999999999999999999999999999999999886
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-14 Score=140.09 Aligned_cols=103 Identities=15% Similarity=0.243 Sum_probs=89.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+++|++++|+|+++.. .+...|+++||.+||+.+.... .++++.|+++++++|++|++|
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPV-KQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 4689999999999999999999999998754 6788899999999999533221 135677999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+|||+. +|+++|+++|+.+|+|.++...
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTVWINQGKSS 200 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCc
Confidence 9999998 8999999999999999998653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >KOG3085|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-14 Score=142.25 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=87.6
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-----eecCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-----EIYPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-----e~~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
.....+++.++++.||++|+.++++||... ..+..+..+|+..|||.+ +...++.|.+|..+++++|++|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~--r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDD--RLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcH--HHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 456778899999999999999999999954 455889999999999987 3344566799999999999999999
Q ss_pred EEEeCCc-ccHHHHhhcCCeEEEECCCCC
Q psy8912 128 VFFDDEE-RNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 128 L~IGDs~-~DI~aAk~aG~~tI~V~~G~~ 155 (538)
++|||+. +|+++|+++||++++|.+..+
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred EEecCccccccHhHHHcCCEEEEEccccc
Confidence 9999996 579999999999999986544
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.4e-14 Score=124.94 Aligned_cols=118 Identities=22% Similarity=0.252 Sum_probs=97.7
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 97 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~ 97 (538)
+++||+|||||+...... ......++|++.++|+.|+++|++++++||+.. ..+...++.+++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA--------------EIEELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCcccc--------------ccccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCch
Confidence 489999999987321110 023568999999999999999999999999988 99999999999876
Q ss_pred CCcceee---c--C----------------CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 98 YFSNKEI---Y--P----------------GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 98 ~Fd~ie~---~--~----------------~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
+|+.+.. . . ++++..+..++++++.+++++++|||+.+|+.+|+++|+.+++|
T Consensus 66 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 66 YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 6665411 1 1 55678899999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.4e-15 Score=135.46 Aligned_cols=128 Identities=15% Similarity=0.065 Sum_probs=93.0
Q ss_pred cceEEeecC----CCCcCCCCCCccc--ccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 384 KDMVFFDDE----ERNARSISKLGVI--GIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 384 ~~l~~~Dld----h~~~s~~~p~~~i--~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
+-++|+||| |....+.+|+... ++.+... .......+.++||+.++|++|+ ++++++|+|++..+ .++.+
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~-~~~~i 77 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLID--GHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRM-YADPV 77 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeC--CceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHH-HHHHH
Confidence 568999999 4433222232211 0111111 1123445789999999999999 67999999999865 89999
Q ss_pred HhhcCCccc-cccceee---cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 458 VDLFNWNQH-FDHKEIF---PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 458 L~~lgL~~y-Fd~~~i~---~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
|+++++..+ |+.+... ...|+. |+++++++|.+|++||+|||+..++++|+++|+.+-
T Consensus 78 l~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 78 LDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred HHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 999999764 5732221 124565 999999999999999999999999999999998874
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.9e-14 Score=144.11 Aligned_cols=106 Identities=12% Similarity=-0.030 Sum_probs=89.9
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-ccceeec---C--CchHHHHHHHHHhCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEIFP---G--QKTTHFANLKKATGI 490 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~~i~~---~--~k~~~~~kal~~lgi 490 (538)
.+...+.++||+.++|++|+++|++++|+|++.+. .+..+|+.+++.+|| +.+.... . ++++.|+++++++|+
T Consensus 95 ~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~-~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~ 173 (267)
T PRK13478 95 KLADYATPIPGVLEVIAALRARGIKIGSTTGYTRE-MMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGV 173 (267)
T ss_pred HHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHH-HHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCC
Confidence 34456789999999999999999999999998754 778899999999986 6322111 1 356779999999999
Q ss_pred C-CCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 491 E-YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 491 ~-pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
. |++|+||||+.+|+++|+++|+.+|+|.+|..
T Consensus 174 ~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 174 YDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 6 69999999999999999999999999999875
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.8e-14 Score=138.82 Aligned_cols=104 Identities=12% Similarity=-0.020 Sum_probs=87.5
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pe 493 (538)
...+.++||+.++|++|+++|++++|+|++... .+...++.+++ .+|+..... ..++++.|..+++++|++|+
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~-~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~ 156 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSVP-VASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQ 156 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCch-HHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcc
Confidence 346789999999999999999999999998765 66778899998 456632211 12456779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|+||||+..|+++|+++|+.+|+|.++...
T Consensus 157 ~~l~igDs~~di~aA~~aG~~~i~v~~~~~~ 187 (218)
T PRK11587 157 ECVVVEDAPAGVLSGLAAGCHVIAVNAPADT 187 (218)
T ss_pred cEEEEecchhhhHHHHHCCCEEEEECCCCch
Confidence 9999999999999999999999999987643
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.7e-14 Score=134.50 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc--------------hHHHHHHHhhcCCcccccccee----------ecCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE--------------MLRAHQLVDLFNWNQHFDHKEI----------FPGQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~--------------~~~a~~~L~~lgL~~yFd~~~i----------~~~~ 476 (538)
.+.++||+.++|++|+++|++++|+|+++. .++....|+++|+ +|+.... ...+
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCC
Confidence 467999999999999999999999998752 1244566788887 3552111 1124
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+++.|.++++++|++|++|++|||+.+|+++|+++|+.+|++.+|....
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~ 153 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVT 153 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCch
Confidence 5677999999999999999999999999999999999999999987643
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.8e-14 Score=131.88 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=89.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------------chHHHHHHHhhcCCccccccceee----------cCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------------EMLRAHQLVDLFNWNQHFDHKEIF----------PGQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------------~~~~a~~~L~~lgL~~yFd~~~i~----------~~~ 476 (538)
.+.++|||.++|++|+++|++++|+|+++ ....+..+|+.+|+. |+...++ ..+
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence 36799999999999999999999999863 123678889999997 6522211 124
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC-CCHHHHHH
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG-MSHSVLHK 529 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg-~t~~~~~~ 529 (538)
+++.|..++++++++|++|+||||+.+|+++|+++|+++++|.++ ++|+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~~~~~~~~ 158 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEELNWDMIAE 158 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhcCHHHHHH
Confidence 567799999999999999999999999999999999999999986 77776554
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.1e-14 Score=133.89 Aligned_cols=122 Identities=12% Similarity=0.102 Sum_probs=92.4
Q ss_pred ceEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch------------
Q psy8912 385 DMVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------------ 451 (538)
Q Consensus 385 ~l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~------------ 451 (538)
.+++||.| -.+.. .+|. .....+.++||+.++|++|+++|++++|+||++..
T Consensus 2 ~~~~~D~Dgtl~~~--~~~~-------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINID--HGYV-------------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCC--CCCC-------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 36889999 44431 1332 12234779999999999999999999999998741
Q ss_pred --HHHHHHHhhcCCcccccccee----------------ecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 452 --LRAHQLVDLFNWNQHFDHKEI----------------FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 452 --~~a~~~L~~lgL~~yFd~~~i----------------~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
......|+.+++. |+.... ...++++.|+.+++++|++|++|+||||+.+|+++|+++|+
T Consensus 67 ~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~ 144 (176)
T TIGR00213 67 LTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKV 144 (176)
T ss_pred HHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCC
Confidence 2344567777665 331110 11246778999999999999999999999999999999999
Q ss_pred EE-EEECCCCC
Q psy8912 514 TC-IHVKDGMS 523 (538)
Q Consensus 514 ~~-i~V~dg~t 523 (538)
.+ ++|.||..
T Consensus 145 ~~~i~v~~g~~ 155 (176)
T TIGR00213 145 KTNVLVRTGKP 155 (176)
T ss_pred cEEEEEecCCc
Confidence 98 89999865
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-14 Score=129.31 Aligned_cols=88 Identities=24% Similarity=0.302 Sum_probs=78.0
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcC-------Cccccccceee-cCCchHHHHHHHHHhC--CCC
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN-------WNQHFDHKEIF-PGQKTTHFANLKKATG--IEY 492 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lg-------L~~yFd~~~i~-~~~k~~~~~kal~~lg--i~p 492 (538)
.+|||+.++|++|+++|+++++||+++.++.+..+++.++ +.+||+..... ..+++++|.++++++| ++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 6999999999999999999999999945668888999999 89999954443 3367888999999999 999
Q ss_pred CcEEEEecccccHHhHcc
Q psy8912 493 KDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~ 510 (538)
++|+||||+..+++++++
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 999999999999998875
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-14 Score=135.45 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=90.2
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHh
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKAT 488 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~l 488 (538)
+.+.+ ..+.++||+.++|++|+++|++++|+|+++.. .++..|+++||.+||+.+.... .++++.|..+++++
T Consensus 84 ~~~~~-~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~-~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~ 161 (198)
T TIGR01428 84 LAEAY-LRLPPHPDVPAGLRALKERGYRLAILSNGSPA-MLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEAL 161 (198)
T ss_pred HHHHH-hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHh
Confidence 34444 35789999999999999999999999998754 7888999999999999433221 13466799999999
Q ss_pred CCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 489 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 489 gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|++|++|++|||+.+|+++|+++|+.+|.|..+
T Consensus 162 ~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 162 GVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred CCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 999999999999999999999999999999764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.2e-14 Score=137.37 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=89.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc--cccccceeecC-----CchHHHHHHHHHhCCC-C
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHKEIFPG-----QKTTHFANLKKATGIE-Y 492 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~--~yFd~~~i~~~-----~k~~~~~kal~~lgi~-p 492 (538)
...++||+.++|++|+++|++++|+|++..+ .++..|+++|+. +||+....... ++++.|.++++++|+. |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~-~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRD-TAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 4689999999999999999999999999755 788899999999 99994322211 3567799999999998 7
Q ss_pred CcEEEEecccccHHhHcccCCEE-EEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTC-IHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~-i~V~dg~t~ 524 (538)
++|+||||+..|+++|+++|+.+ +++.+|...
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~ 196 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHD 196 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCc
Confidence 99999999999999999999999 999998643
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.7e-14 Score=138.47 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=86.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-------CCchHHHHHHHHHhC---
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-------GQKTTHFANLKKATG--- 489 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-------~~k~~~~~kal~~lg--- 489 (538)
....++|||.++|+.|+++|++++|+|++.........++..++.+||+...... .++++.|++++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~ 154 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence 4578999999999999999999999999875434334555668889998433333 135667999999996
Q ss_pred CCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 490 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 490 i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|++|+||||+..|+++|+++|+.+|+|.++...
T Consensus 155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~ 189 (220)
T PLN02811 155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLD 189 (220)
T ss_pred CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCc
Confidence 99999999999999999999999999999987643
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.7e-14 Score=148.45 Aligned_cols=120 Identities=24% Similarity=0.286 Sum_probs=101.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH--
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-- 92 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-- 92 (538)
.+|+|+||+|+|||..-+.... ........+|||+.++|+.|+++|++++|+||++. ..+..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g-----------~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDG-----------IDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCC-----------ccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhCc
Confidence 3799999999999972211110 00011234689999999999999999999999988 999999999
Q ss_pred --cCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 93 --INLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 93 --lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
+++.++|+.+....++||+.+..+++++|+.|++++||||++.|+.++++++..
T Consensus 70 ~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 70 DFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred cccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 899999999877788899999999999999999999999999999999997765
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.1e-14 Score=143.14 Aligned_cols=128 Identities=18% Similarity=0.179 Sum_probs=103.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.++++||+||||....-.. ++ .+. ......++|++.++|+.|+++|++++++||++. ...+..++.+++
T Consensus 158 ~~~~~~D~dgtl~~~~~~~---~~--~~~-----~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~-~~~~~~l~~l~~ 226 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRS---PY--DWT-----KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDG-VCEEDTVEWLRQ 226 (300)
T ss_pred CCEEEEECCCcCcCCCCCC---cc--chh-----hcccCCCChhHHHHHHHHHhCCCEEEEEeCCCh-hhHHHHHHHHHH
Confidence 5799999999996521100 00 000 123457899999999999999999999999998 999999999999
Q ss_pred CC-CCcceeecC------------CCCHHHHHHHHHHcCC-CCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 96 NQ-YFSNKEIYP------------GQKTTHFESLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 96 ~~-~Fd~ie~~~------------~~Kp~~f~~ale~lgi-~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
.+ +|+.+.... +++|+++..++++++. +|++|++|||+..|+++|+++|+.+++|.||.
T Consensus 227 ~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 227 TDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred cCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 86 888663222 3456889999999998 67999999999999999999999999998874
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.8e-14 Score=136.22 Aligned_cols=108 Identities=22% Similarity=0.275 Sum_probs=89.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh-cCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~-lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
..++||+.++|++|+++|++++|+|+++.. .....+.. .++..||+...... .++++.|+.+++++|++|++|
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~-~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRL-HTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchh-hHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 358999999999999999999999998754 54545554 48889999432221 145777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCHHHHHHH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKG 530 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~ 530 (538)
+||||+..|+++|+++|++++.++++.++....+.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHh
Confidence 99999999999999999999999998887766554
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.8e-14 Score=132.79 Aligned_cols=96 Identities=17% Similarity=0.195 Sum_probs=83.2
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
...++|||.++|++|+++|++++|+|++.. +...|+++||.+||+..... ..++++.|.+++++++++|++|
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSEC 161 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 357899999999999999999999997642 45689999999999943221 1256777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEEC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
|+|||+.+|+++|+++|+.+|+|+
T Consensus 162 v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 162 IGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >KOG2914|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-13 Score=135.96 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=88.9
Q ss_pred hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC-CCCCCcceee-------cCCCCHHHHHHHHHHcC
Q psy8912 50 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN-LNQYFSNKEI-------YPGQKTTHFESLKKATG 121 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg-L~~~Fd~ie~-------~~~~Kp~~f~~ale~lg 121 (538)
......+.||+.++++.|+..|++++++|++++ ...+..+..++ +...|+.+.. .+++.|++|..+++++|
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~-~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~ 165 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTS-ASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG 165 (222)
T ss_pred hccccccCCcHHHHHHHHHhCCCCeeEEecCCc-ccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence 566778999999999999999999999999988 88888888887 5566665422 23456799999999999
Q ss_pred CCC-CcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 122 IEY-KDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 122 i~P-~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
..| +.||+++|++.++++|+++||++|++.+
T Consensus 166 ~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 166 VPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 999 9999999999999999999999999987
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=140.33 Aligned_cols=68 Identities=12% Similarity=-0.025 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhh-----CCCCCCEEEeCCc
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEAT-----GIDYKDMIYFDDE 176 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l-----~~~~~d~Ii~d~~ 176 (538)
.|.+|..+++++|++|++|+||||+. .||++|+++|+.+++|.||....+.++.. ....||+++.+..
T Consensus 204 ~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~ 277 (279)
T TIGR01452 204 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLA 277 (279)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccc
Confidence 34679999999999999999999995 89999999999999999999877666532 2357899887643
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=135.88 Aligned_cols=69 Identities=10% Similarity=-0.069 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|..++++++++|++|+||||+. .|+.+|+++|+.+++|.+|....+..+. ....||+++.+..+
T Consensus 175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~-~~~~pd~~~~sl~e 244 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDS-MPFRPSWIYPSVAD 244 (248)
T ss_pred CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhc-CCCCCCEEECCHHH
Confidence 345789999999999999999999997 7999999999999999999988766554 34678999877544
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.9e-14 Score=131.58 Aligned_cols=135 Identities=10% Similarity=0.093 Sum_probs=101.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|+||+||||.+....... . ++......+-++. +|++|+++|++++|+||++. ..+...++.+|+
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~--~--------~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~-~~~~~~l~~~gi 67 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTN--N--------GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKA-KLVEDRCKTLGI 67 (154)
T ss_pred CeEEEEeCceeEEcCeEEECC--C--------CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCC-HHHHHHHHHcCC
Confidence 589999999999763210000 0 0000111122332 89999999999999999998 889999999999
Q ss_pred CCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 96 NQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 96 ~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
..+|+. .++||+.+..+++++|++|++|+||||+.+|+.+++++|+. +++.+... .. ...++++....
T Consensus 68 ~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~---~~----~~~a~~i~~~~ 135 (154)
T TIGR01670 68 THLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP---LL----IPRADYVTRIA 135 (154)
T ss_pred CEEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH---HH----HHhCCEEecCC
Confidence 988875 36789999999999999999999999999999999999996 77766542 11 22368887664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=138.44 Aligned_cols=68 Identities=18% Similarity=0.061 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++|.+|..+++++|++|++|+||||+. .|+.+|+++|+.+++|.+|.......+ .....||+++.+..
T Consensus 180 P~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~-~~~~~pd~~~~sl~ 248 (257)
T TIGR01458 180 PSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEE-KINVPPDLTCDSLP 248 (257)
T ss_pred CCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhc-ccCCCCCEEECCHH
Confidence 345789999999999999999999996 899999999999999999875433222 23457888887643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-13 Score=128.44 Aligned_cols=110 Identities=22% Similarity=0.169 Sum_probs=94.6
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
-+++|++|+|+||.+ -.....-|.+.+.+.+++++|+++.|+||++. ..+....+.+|
T Consensus 27 Gikgvi~DlDNTLv~---------------------wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e-~RV~~~~~~l~ 84 (175)
T COG2179 27 GIKGVILDLDNTLVP---------------------WDNPDATPELRAWLAELKEAGIKVVVVSNNKE-SRVARAAEKLG 84 (175)
T ss_pred CCcEEEEeccCceec---------------------ccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCH-HHHHhhhhhcC
Confidence 479999999999943 12566778899999999999999999999987 88888888888
Q ss_pred CCCCCcceeecCCCCH--HHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECC
Q psy8912 95 LNQYFSNKEIYPGQKT--THFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp--~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~ 152 (538)
+. + +....|| ..|.+|+++++++|++|+||||.. .||.+|+.+||+||.|..
T Consensus 85 v~----f--i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 85 VP----F--IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred Cc----e--eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 53 3 3344555 789999999999999999999996 699999999999999974
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-13 Score=134.65 Aligned_cols=120 Identities=10% Similarity=0.045 Sum_probs=94.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHH-HHHHcCCCCCCcceee-----c--CCCCHHHHHHHHHHcC--
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQ-ILNLINLNQYFSNKEI-----Y--PGQKTTHFESLKKATG-- 121 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~-~L~~lgL~~~Fd~ie~-----~--~~~Kp~~f~~ale~lg-- 121 (538)
....++||+.++|+.|+++|++++|+||+.. ..... .++..++.++|+.+.. . .+++|++|..++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~-~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHK-RHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCch-hhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 3577899999999999999999999999976 44443 3334467788887622 2 2345689999999997
Q ss_pred -CCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 122 -IEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 122 -i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|+||||+..|+++|+++|+.+|+|.++...... . ..+|+++.+..+
T Consensus 154 ~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~---~--~~~d~vi~~~~e 205 (220)
T PLN02811 154 PVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSY---C--KGADQVLSSLLD 205 (220)
T ss_pred CCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhh---h--hchhhHhcCHhh
Confidence 99999999999999999999999999999887644322 1 256777666544
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-13 Score=143.09 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=97.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC--------------
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-------------- 81 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~-------------- 81 (538)
.|+++||.||||+...... +.........++||+.++|+.|+++|++++|+||++
T Consensus 2 ~k~l~lDrDgtl~~~~~~~-----------y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~ 70 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTD-----------FQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDP 70 (354)
T ss_pred CcEEEEeCCCCccCCCCcc-----------ccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhh
Confidence 5799999999997632111 112234568999999999999999999999999962
Q ss_pred -cHHHHHHHHHHcCCCCCCcceee----------cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 82 -EILHAKQILNLINLNQYFSNKEI----------YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 82 -~p~~~~~~L~~lgL~~~Fd~ie~----------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
. .....+++.+++. |+.+.. ..+++|.++..++++++++|++++||||+.+|+++|+++|+.+|++
T Consensus 71 ~~-~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 71 PH-NLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred HH-HHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 3 4566778888873 554311 2245678999999999999999999999999999999999999999
Q ss_pred CC
Q psy8912 151 WL 152 (538)
Q Consensus 151 ~~ 152 (538)
+.
T Consensus 148 ~~ 149 (354)
T PRK05446 148 AR 149 (354)
T ss_pred EC
Confidence 54
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=130.70 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=83.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++++|++ . .++..|+++|+.+||+..... ..++++.|.++++++|++|++
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~-~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS--K-NADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNE 161 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc--h-hHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 35789999999999999999999999987 3 678899999999999943221 113566799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEE
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
|++|||+..|+++|+++|+.+|+|
T Consensus 162 ~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999999999999999999999986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-13 Score=142.53 Aligned_cols=68 Identities=13% Similarity=0.010 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhh-CCCCCCEEEeCCc
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEAT-GIDYKDMIYFDDE 176 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l-~~~~~d~Ii~d~~ 176 (538)
+|.+|..+++++++++++|+||||+. .||.+|+++|+.+++|.+|....+..... ....||+++.+..
T Consensus 232 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~ 301 (311)
T PLN02645 232 STFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKIS 301 (311)
T ss_pred hHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHH
Confidence 34679999999999999999999997 89999999999999999998876654432 2356888887643
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.2e-13 Score=129.45 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=77.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee-------ecC--CCCHHHHHHHHHHcCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE-------IYP--GQKTTHFESLKKATGI 122 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie-------~~~--~~Kp~~f~~ale~lgi 122 (538)
....++||+.++|+.|+++ ++++|+||+.. ..++..++.+|+..+|+... ..+ ..+|.....++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFY-EFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcH-HHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 5677899999999999999 99999999999 99999999999988886431 111 1245556666777777
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
.+++|+||||+.+|+.+++++|+.+
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 8899999999999999999999854
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-13 Score=127.44 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=81.9
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee~l 496 (538)
+.++||+.++|++|+++|++++++|++... . ...+.++|+.+||+..... .. ++++.|..+++++|++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~-~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRD-H-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchH-H-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 789999999999999999999999998755 4 5566669999999953321 12 346779999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEE
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V 518 (538)
+|||+..|+++|+++|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999975
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.2e-13 Score=145.06 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=89.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHh-hcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD-LFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~-~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
..+.++||+.++|++|+++|++++|+|++... .++..|+ .+|+.+||+.+.... .++++.|+.+++++|++|+
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~-~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRA-NIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHH-HHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 46789999999999999999999999999754 6777786 799999999533222 2346779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+..|+++|+++|+.+|+|+++..
T Consensus 169 ~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~ 198 (382)
T PLN02940 169 NCLVIEDSLPGVMAGKAAGMEVIAVPSIPK 198 (382)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEECCCCc
Confidence 999999999999999999999999999753
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-13 Score=132.39 Aligned_cols=102 Identities=11% Similarity=0.050 Sum_probs=85.8
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIE 491 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~ 491 (538)
.+...+.++||+.++|++|+ +|++++|+|++.. +.++..|+++|+.+||+.+.... .++++.|.++++++|+.
T Consensus 89 ~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~ 166 (224)
T PRK09449 89 AMAEICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNP 166 (224)
T ss_pred HHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCC
Confidence 34445789999999999999 6899999998875 47888899999999999543322 24566799999999985
Q ss_pred -CCcEEEEeccc-ccHHhHcccCCEEEEECC
Q psy8912 492 -YKDMVFFDDEE-RNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 492 -pee~l~~eDs~-~~I~aAk~aGi~~i~V~d 520 (538)
+++|+||||+. +|+++|+++|++++.+.+
T Consensus 167 ~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 167 DRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred CcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 48999999998 699999999999999975
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-13 Score=130.19 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=72.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+ +++|+||++. ..++..++++|+..+|+.+ +. ..++.|++|..+++++|++|++
T Consensus 87 ~~~~~~~g~~~~L~-------~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~ 158 (175)
T TIGR01493 87 KNLPPWPDSAAALA-------RVAILSNASH-WAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDR 158 (175)
T ss_pred hcCCCCCchHHHHH-------HHhhhhCCCH-HHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHH
Confidence 35679999999998 3899999988 8999999999999999976 22 2345568999999999999999
Q ss_pred EEEEeCCcccHHHHhhc
Q psy8912 127 MVFFDDEERNSHDVSPL 143 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~a 143 (538)
|+||||+..|+.+|+++
T Consensus 159 ~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 159 VLMVAAHQWDLIGARKF 175 (175)
T ss_pred eEeEecChhhHHHHhcC
Confidence 99999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.3e-13 Score=133.43 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=85.2
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc---CCccccccc---eeecCCchHHHHHHHHHhCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---NWNQHFDHK---EIFPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l---gL~~yFd~~---~i~~~~k~~~~~kal~~lgi~p 492 (538)
.....+|||+.++|++|+++|++++|+||++.. ..+.+++++ +|.+||+.. .++...+++.|.++++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~-~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVP-AQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 345679999999999999999999999998754 556667775 566666521 2333456788999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++|+||||+..|+++|+++|+.++.+.++-
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999997754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.4e-13 Score=120.37 Aligned_cols=98 Identities=17% Similarity=0.156 Sum_probs=81.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------chHHHHHHHhhcCCcccccccee-ecCCchHHHHHHHHHh-CC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------EMLRAHQLVDLFNWNQHFDHKEI-FPGQKTTHFANLKKAT-GI 490 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------~~~~a~~~L~~lgL~~yFd~~~i-~~~~k~~~~~kal~~l-gi 490 (538)
+..++||+.++|++|+++|++++++|++. .. .++..++++++..+|..... ...++++.|+.+++++ ++
T Consensus 23 ~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 101 (132)
T TIGR01662 23 ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSG-RVARRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEI 101 (132)
T ss_pred HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHH-HHHHHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence 35689999999999999999999999886 43 67889999999744432111 1235678899999999 59
Q ss_pred CCCcEEEEec-ccccHHhHcccCCEEEEEC
Q psy8912 491 EYKDMVFFDD-EERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 491 ~pee~l~~eD-s~~~I~aAk~aGi~~i~V~ 519 (538)
+|++|+|||| +..|+.+|+++|+.+|.+.
T Consensus 102 ~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 102 DPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 9999999999 7999999999999999885
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.3e-13 Score=137.27 Aligned_cols=103 Identities=20% Similarity=0.296 Sum_probs=90.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---c--CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---P--GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~--~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++|+|+++.+ .++.+|+++++..||+.+... . .++++.|+.+++++|++|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~-~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPER-FVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHH-HHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 4679999999999999999999999988754 788899999999999943222 1 134667999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+.+|+++|+++|+++++|.+|.+.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~~ 206 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQCVALSYGYNH 206 (272)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCCC
Confidence 99999999999999999999999998653
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-13 Score=140.64 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=83.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----------e-----ecCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----------E-----IYPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----------e-----~~~~~Kp~~f~~ 115 (538)
....+++||+.++|+.|++.|++++|+|++.. ...+..++.+|+...|... . ....+|++.+..
T Consensus 177 ~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~-~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~ 255 (322)
T PRK11133 177 RENLPLMPGLTELVLKLQALGWKVAIASGGFT-YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTR 255 (322)
T ss_pred HHhCCCChhHHHHHHHHHHcCCEEEEEECCcc-hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHH
Confidence 44578999999999999999999999999988 8888899999987644311 0 113468899999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+++++|++|++|++|||+.+|+.+++.+|+..+.
T Consensus 256 la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 256 LAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 9999999999999999999999999999997553
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.1e-13 Score=132.42 Aligned_cols=103 Identities=19% Similarity=0.157 Sum_probs=84.4
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchH-HHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEML-RAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~-~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
..+.++||+.++|++|+++|++++|+|++.... .....+..+++.+||+.+.... .+.++.|+.+++++|++|+
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 357899999999999999999999999876431 1333455678899999533221 2346679999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|+||||+..|+++|+++|+++|+|.++.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 99999999999999999999999998753
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.9e-13 Score=134.16 Aligned_cols=212 Identities=9% Similarity=0.040 Sum_probs=138.3
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeeccccccchh-hhHHhhhCCCc-ccccccccCcch-hhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRTVHIRNA-YSLLHLLGLSD-FFDYKEIFPAEK-KIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 377 (538)
+-|-.|++. .+||.+++.|+.|+++|++++++|=++..... ...|..+|+.. .| ++|+++.. -..++..+.+
T Consensus 12 ~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~--~~Ii~s~~~~~~~l~~~~~ 89 (242)
T TIGR01459 12 LLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP--EMIISSGEIAVQMILESKK 89 (242)
T ss_pred EEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc--ceEEccHHHHHHHHHhhhh
Confidence 346666654 57999999999999999999999887664322 26889999986 76 48888842 2345554444
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccc-ccc-ccc-hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHH
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIG-IQV-HRD-KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA 454 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~-i~~-~~~-~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a 454 (538)
..+.+-...+++=-...++..+....... ... ... .+.........-||++.++|+.|+++|+++ |+|+++.. ++
T Consensus 90 ~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~~~~l~~l~~~g~~~-i~tN~d~~-~~ 167 (242)
T TIGR01459 90 RFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRSENEKLDLDEFDELFAPIVARKIPN-ICANPDRG-IN 167 (242)
T ss_pred hccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCCCcccCCHHHHHHHHHHHHhCCCcE-EEECCCEe-cc
Confidence 43443333333321122333221111100 000 000 011101001123799999999999999998 88988754 66
Q ss_pred HHHHhhcCCccccccce-----e--ecCCchHHHHHHHHHhCCC-CCcEEEEecc-cccHHhHcccCCEEEEEC
Q psy8912 455 HQLVDLFNWNQHFDHKE-----I--FPGQKTTHFANLKKATGIE-YKDMVFFDDE-ERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 455 ~~~L~~lgL~~yFd~~~-----i--~~~~k~~~~~kal~~lgi~-pee~l~~eDs-~~~I~aAk~aGi~~i~V~ 519 (538)
...+..++...||...+ . ...+++..|..+++++|.. +++|++|||+ .+||.+|+++|+.++.|.
T Consensus 168 ~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 168 QHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred CCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 66678888887777321 1 1224566799999999975 6799999999 699999999999999984
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-13 Score=124.61 Aligned_cols=98 Identities=16% Similarity=0.269 Sum_probs=86.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|+.|+++|++++++|+++. ..++..|+++|+.++|+...+.. .++++.|..+++++|++|++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 4678999999999999999999999999874 57888999999999999433322 13457799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEE
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
|++|||+..|+++|+++|+.+|+|
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999986
|
... |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=131.22 Aligned_cols=66 Identities=8% Similarity=-0.020 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|++|..++++++++|++|+||||+. .|+.+|+++|+++++|.+|....+.... ....||+++.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~-~~~~pd~~v~~l 246 (249)
T TIGR01457 180 NAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAG-LPIAPTHVVSSL 246 (249)
T ss_pred hHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhc-CCCCCCEEeCCh
Confidence 35789999999999999999999997 7999999999999999999876554433 224688887654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-13 Score=128.94 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=83.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++|| .++|++|+++ ++++|+|+++.. .++..|+++|+.+||+.+.... .++++.|.++++++|++|++
T Consensus 85 ~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~-~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 161 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESA-IAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161 (188)
T ss_pred ccCCCccH-HHHHHHHHhC-CCEEEEcCCchH-HHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHH
Confidence 34678896 5899999876 899999998754 8888999999999999533221 14567799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
||||||+.+|+++|+++|+.+|+|..
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~~ 187 (188)
T PRK10725 162 CVVFEDADFGIQAARAAGMDAVDVRL 187 (188)
T ss_pred eEEEeccHhhHHHHHHCCCEEEeecC
Confidence 99999999999999999999999974
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-12 Score=133.03 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=99.3
Q ss_pred ccceEEeecC---CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHh
Q psy8912 383 YKDMVFFDDE---ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 459 (538)
Q Consensus 383 ~~~l~~~Dld---h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~ 459 (538)
.+.+++||+| ..+... .||. +. ......++||+.++|+.|+++|++++++|+++.. .++..++
T Consensus 157 ~~~~~~~D~dgtl~~~~~~-~~~~-----------~~-~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~-~~~~~l~ 222 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGR-SPYD-----------WT-KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGV-CEEDTVE 222 (300)
T ss_pred CCCEEEEECCCcCcCCCCC-Cccc-----------hh-hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChh-hHHHHHH
Confidence 4579999999 222221 2322 00 1123578999999999999999999999999764 8889999
Q ss_pred hcCCcc-ccccceeec------------CCchHHHHHHHHHhCC-CCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 460 LFNWNQ-HFDHKEIFP------------GQKTTHFANLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 460 ~lgL~~-yFd~~~i~~------------~~k~~~~~kal~~lgi-~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.+++.+ ||+.....+ .+.+..++.++++++. +|++|++|||+.+|+++|+++|+.+++|.||
T Consensus 223 ~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 223 WLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 999997 998443333 2346679999999998 6899999999999999999999999999997
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.5e-13 Score=136.72 Aligned_cols=102 Identities=14% Similarity=0.159 Sum_probs=84.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc-ee-e---cC--CchHHHHHHHHHhCCCCCc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI-F---PG--QKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~-~i-~---~~--~k~~~~~kal~~lgi~pee 494 (538)
+.++||+.++|++|+++|++++|+|+++.. .+..+|+.++...+|+.. .+ . .. ++++.|.++++++|++|++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~-~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEK-AVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 689999999999999999999999998754 667788877544555421 11 1 12 3466799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+||||+.+|+++|+++|+.+|+|.+|...
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~ 251 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTA 251 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCcc
Confidence 999999999999999999999999998654
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.6e-13 Score=128.36 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=90.4
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++++|++.. ..++..++++|+.++|+...... .++++.|.+++++++++|+
T Consensus 89 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 167 (226)
T PRK13222 89 AGGSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167 (226)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChh
Confidence 34578999999999999999999999998874 47888999999999999422211 1356779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+.+|+++|+++|+.+++|.||..
T Consensus 168 ~~i~igD~~~Di~~a~~~g~~~i~v~~g~~ 197 (226)
T PRK13222 168 EMLFVGDSRNDIQAARAAGCPSVGVTYGYN 197 (226)
T ss_pred heEEECCCHHHHHHHHHCCCcEEEECcCCC
Confidence 999999999999999999999999999865
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.5e-13 Score=126.76 Aligned_cols=117 Identities=11% Similarity=0.098 Sum_probs=91.3
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+++||+||||.+..+.-.. .......+...+| ..++.|+++|++++|+||++. ..++..++.+|
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~----------~g~~~~~~~~~D~--~~~~~L~~~Gi~laIiT~k~~-~~~~~~l~~lg 72 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVIND----------EGIESRNFDIKDG--MGVIVLQLCGIDVAIITSKKS-GAVRHRAEELK 72 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcC----------CCcEEEEEecchH--HHHHHHHHCCCEEEEEECCCc-HHHHHHHHHCC
Confidence 3899999999999542100000 0000111122222 357889999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
+..+|+.+ ++||+.|..++++++++|++|++|||+.+|+.+++.+|+..+
T Consensus 73 i~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 73 IKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred CcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 99888863 578999999999999999999999999999999999999754
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.5e-13 Score=133.28 Aligned_cols=205 Identities=16% Similarity=0.158 Sum_probs=142.1
Q ss_pred cccccccccc-------cccchHHHHHHhhhcCcceeeecccccc--chhhhHHhhhCCCcccccccccCcchhhhhh-h
Q psy8912 304 VEDAKGTLLN-------LYRDIPEIVKYLKDHNIKLALASRTVHI--RNAYSLLHLLGLSDFFDYKEIFPAEKKIKHF-A 373 (538)
Q Consensus 304 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 373 (538)
+-|-.|||.+ ++|.+.+.|+.|+++|++.+++|=.++. .-....|..+|+. +...||++|..-+.++ +
T Consensus 5 ~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~--~~~~~i~ts~~~~~~~l~ 82 (257)
T TIGR01458 5 LLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD--ISEDEVFTPAPAARQLLE 82 (257)
T ss_pred EEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC--CCHHHeEcHHHHHHHHHH
Confidence 4577888886 8999999999999999999999954333 3466778889986 7889999995444433 3
Q ss_pred hcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHH
Q psy8912 374 NLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLR 453 (538)
Q Consensus 374 ~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~ 453 (538)
... ....++.=+ + ..+.++.+. .. ....+.-.+...--.|+++.+.++.|++.|++++++|+++.. .
T Consensus 83 ~~~-----~~~~~~g~~-~--~~~~~~~~~---~~-~~~~Vv~g~~~~~~~y~~l~~a~~~L~~~~~~~~iatn~~~~-~ 149 (257)
T TIGR01458 83 EKQ-----LRPMLLVDD-R--VLPDFDGID---TS-DPNCVVMGLAPEHFSYQILNQAFRLLLDGAKPLLIAIGKGRY-Y 149 (257)
T ss_pred hcC-----CCeEEEECc-c--HHHHhccCC---CC-CCCEEEEecccCccCHHHHHHHHHHHHcCCCCEEEEeCCCCC-C
Confidence 311 111222211 1 011111100 00 001111111111224789999999999999999999988754 5
Q ss_pred HHHHHhhcCCcccccccee--------ecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 454 AHQLVDLFNWNQHFDHKEI--------FPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 454 a~~~L~~lgL~~yFd~~~i--------~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
....+..+|+..||+.... ...+++..|..+++++|++|++|++|||+. +||.+|+++|+++++|.+|.+
T Consensus 150 ~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~ 228 (257)
T TIGR01458 150 KRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKY 228 (257)
T ss_pred cCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence 5566778899999983221 123457779999999999999999999996 999999999999999999964
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-13 Score=130.55 Aligned_cols=135 Identities=10% Similarity=0.036 Sum_probs=98.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+|+||+||||.+..+... .. +.........+ ...++.|+++|++++|+||.+. ..+...++.+|
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~-~~---------~~~~~~~~~~d--~~~i~~L~~~Gi~v~I~T~~~~-~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMG-NN---------GEELKAFNVRD--GYGIRCLLTSGIEVAIITGRKS-KLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEc-CC---------CCEEEEEeccc--hHHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHcC
Confidence 489999999999965311000 00 00000011111 2468889999999999999988 89999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+. ...|++.+..+++++|++|++|+||||+.+|+.+++++|+.+ .+.++ .. .....+++++..
T Consensus 87 l~~~f~g----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~-~v~~~---~~----~~~~~a~~v~~~ 154 (183)
T PRK09484 87 ITHLYQG----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV-AVADA---HP----LLLPRADYVTRI 154 (183)
T ss_pred CceeecC----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE-ecCCh---hH----HHHHhCCEEecC
Confidence 9888874 346789999999999999999999999999999999999984 45321 11 112356888764
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.9e-13 Score=128.27 Aligned_cols=101 Identities=8% Similarity=0.041 Sum_probs=87.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHh-CCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKAT-GIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~l-gi~pe 493 (538)
..+.++||+.++|++|+++ ++++|+|++... .++..|+.+|+..||+.+.... .++++.|.++++++ |++|+
T Consensus 94 ~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~-~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 171 (224)
T TIGR02254 94 EGHQLLPGAFELMENLQQK-FRLYIVTNGVRE-TQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKE 171 (224)
T ss_pred ccCeeCccHHHHHHHHHhc-CcEEEEeCCchH-HHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCch
Confidence 3478999999999999999 999999998754 7788999999999999533322 14566799999999 99999
Q ss_pred cEEEEeccc-ccHHhHcccCCEEEEECCCC
Q psy8912 494 DMVFFDDEE-RNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 494 e~l~~eDs~-~~I~aAk~aGi~~i~V~dg~ 522 (538)
+||||||+. .|+++|+++|+.+|.+.++.
T Consensus 172 ~~v~igD~~~~di~~A~~~G~~~i~~~~~~ 201 (224)
T TIGR02254 172 EVLMIGDSLTADIKGGQNAGLDTCWMNPDM 201 (224)
T ss_pred heEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence 999999998 79999999999999998863
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.9e-14 Score=128.94 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=94.5
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHH------hhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVM------DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~------~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
+.+++|+||||......... +.... .... ......+.++||+.++|+.|+ ++++++|+||++. ..++.++
T Consensus 3 ~~lvldld~tl~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~-~~~~~il 78 (148)
T smart00577 3 KTLVLDLDETLVHSTHRSFK-EWTNR-DFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLR-MYADPVL 78 (148)
T ss_pred cEEEEeCCCCeECCCCCcCC-CCCcc-ceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcH-HHHHHHH
Confidence 57999999999653211100 00000 0000 012345678999999999999 5799999999999 9999999
Q ss_pred HHcCCCCC-Ccce---eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 91 NLINLNQY-FSNK---EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 91 ~~lgL~~~-Fd~i---e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
+.+++..+ |+.+ +.....||. |.++++++|++|++|++|||+..|+++|+++|+.+
T Consensus 79 ~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 79 DLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred HHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 99998654 5765 333445777 99999999999999999999999999999999874
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=124.03 Aligned_cols=107 Identities=12% Similarity=0.045 Sum_probs=89.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
..++||+.++|++|+++|++++++|+++....+..+++.+|+..++. ...++++.|..+++++|++|++|+||||+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~~----~~KP~p~~~~~~l~~~~~~~~~~l~IGDs 117 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLPH----AVKPPGCAFRRAHPEMGLTSEQVAVVGDR 117 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEcC----CCCCChHHHHHHHHHcCCCHHHEEEECCc
Confidence 46899999999999999999999999873346777788888865543 22456788999999999999999999999
Q ss_pred c-ccHHhHcccCCEEEEECCCCC-HHHHHHHHH
Q psy8912 502 E-RNSHDVSPLGVTCIHVKDGMS-HSVLHKGLK 532 (538)
Q Consensus 502 ~-~~I~aAk~aGi~~i~V~dg~t-~~~~~~~l~ 532 (538)
. .|+++|+++|+.+|+|.+|.. .+.|..++.
T Consensus 118 ~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~ 150 (170)
T TIGR01668 118 LFTDVMGGNRNGSYTILVEPLVHPDQWFIKRIW 150 (170)
T ss_pred chHHHHHHHHcCCeEEEEccCcCCccccchhhH
Confidence 8 699999999999999999864 455655553
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=123.85 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=89.0
Q ss_pred cCcCCCccceEEeecC-CCCc--CCCCCCcccccccccchHhhhcCCCCc-cCCCHHHHHHHHHHCCceEEEEeCCCch-
Q psy8912 377 KDSKIKYKDMVFFDDE-ERNA--RSISKLGVIGIQVHRDKVLDAGGAIIK-YYRDVPAILKYLKQNNCLVAAASRTTEM- 451 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-h~~~--s~~~p~~~i~i~~~~~~i~d~~~~~v~-l~pGv~e~L~~Lk~~GiklaIASss~~~- 451 (538)
|.++|+. .+++||+| -.+. |.. +|- . ....+. +|||+.++|++|+++|++++|+|+++..
T Consensus 7 ~~~~~~~-k~~~~D~Dgtl~~~~~~~-~~~-----------~--~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~ 71 (166)
T TIGR01664 7 DGPKPQS-KVAAFDLDGTLITTRSGK-VFP-----------T--SASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIG 71 (166)
T ss_pred CCCCCcC-cEEEEeCCCceEecCCCC-ccc-----------C--ChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccc
Confidence 5688855 67889999 2111 111 110 0 111233 7899999999999999999999987642
Q ss_pred ----------HHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhC--CCCCcEEEEeccc--------ccHH
Q psy8912 452 ----------LRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATG--IEYKDMVFFDDEE--------RNSH 506 (538)
Q Consensus 452 ----------~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lg--i~pee~l~~eDs~--------~~I~ 506 (538)
..++.+|+++|+.. +. .... ..++++.++.+++++| ++|++|+||||+. .|++
T Consensus 72 ~~~~~~~~~~~~i~~~l~~~gl~~-~~-ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~ 149 (166)
T TIGR01664 72 RGKLSAESFKNKIEAFLEKLKVPI-QV-LAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIK 149 (166)
T ss_pred cCcccHHHHHHHHHHHHHHcCCCE-EE-EEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHH
Confidence 24677899999954 22 1111 1134667999999999 9999999999996 6999
Q ss_pred hHcccCCEEE
Q psy8912 507 DVSPLGVTCI 516 (538)
Q Consensus 507 aAk~aGi~~i 516 (538)
+|+++|+.++
T Consensus 150 aA~~aGi~~~ 159 (166)
T TIGR01664 150 FAKNLGLEFK 159 (166)
T ss_pred HHHHCCCCcC
Confidence 9999999985
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.5e-13 Score=143.30 Aligned_cols=101 Identities=17% Similarity=0.239 Sum_probs=88.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec----CCchHHHHHHHHHhCCCCCcEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP----GQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~----~~k~~~~~kal~~lgi~pee~l 496 (538)
...+|||+.++|++|+++|++++|+|++... .++..|+++|+.+||+...... .+|++.|..+++++ +|++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~-~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTE-YLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence 5789999999999999999999999999764 8899999999999999543322 25788899999876 579999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|||+.+|+++|+++|+.+|+|+||...
T Consensus 405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~~ 432 (459)
T PRK06698 405 VVGDRLSDINAAKDNGLIAIGCNFDFAQ 432 (459)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEeCCCCc
Confidence 9999999999999999999999998643
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-12 Score=130.13 Aligned_cols=144 Identities=11% Similarity=0.069 Sum_probs=99.6
Q ss_pred hcccCcCCCccceEEeecC--CCCcCC---C--CCCccccccc-cc----chHhhhcCCCCccCCCHHHHHHHHHHCCce
Q psy8912 374 NLKKDSKIKYKDMVFFDDE--ERNARS---I--SKLGVIGIQV-HR----DKVLDAGGAIIKYYRDVPAILKYLKQNNCL 441 (538)
Q Consensus 374 ~~~~~~~~~~~~l~~~Dld--h~~~s~---~--~p~~~i~i~~-~~----~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gik 441 (538)
.|++.-+-+.|..++|||| =.|.|. . +.+.--.++. .+ +........+..+++++.++|++|+++|++
T Consensus 53 ~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~ 132 (237)
T TIGR01672 53 QIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDA 132 (237)
T ss_pred HHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCE
Confidence 4555555667999999999 222222 1 1111000011 11 222223344557788899999999999999
Q ss_pred EEEEeCCC---chHHHHHHHhhcCCccccccceeecC-----CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 442 VAAASRTT---EMLRAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 442 laIASss~---~~~~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
++++|++. .+..++.+++++|+.+||+. +..+ .|++.. .+++++++ ++||||+.+||.+|++||+
T Consensus 133 i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~--i~~~d~~~~~Kp~~~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 133 IFFVTGRTPGKTDTVSKTLAKNFHIPAMNPV--IFAGDKPGQYQYTKT-QWIQDKNI----RIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHhCCchheeE--EECCCCCCCCCCCHH-HHHHhCCC----eEEEeCCHHHHHHHHHCCC
Confidence 99999872 23478889999999999983 3332 344444 45666776 8999999999999999999
Q ss_pred EEEEECCCCCH
Q psy8912 514 TCIHVKDGMSH 524 (538)
Q Consensus 514 ~~i~V~dg~t~ 524 (538)
.+++|.||.+.
T Consensus 206 ~~I~V~~g~~s 216 (237)
T TIGR01672 206 RGIRILRASNS 216 (237)
T ss_pred CEEEEEecCCC
Confidence 99999998654
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-12 Score=127.32 Aligned_cols=99 Identities=8% Similarity=0.041 Sum_probs=84.1
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-ceee---cC--CchHHHHHHHHHhCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEIF---PG--QKTTHFANLKKATGIE 491 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i~---~~--~k~~~~~kal~~lgi~ 491 (538)
+...+.++||+.++|+.| +++++|+|++.. +.++..|+++|+.+||+. .... .. ++++.|..+++++|++
T Consensus 83 ~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~ 158 (221)
T PRK10563 83 FDSELEPIAGANALLESI---TVPMCVVSNGPV-SKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN 158 (221)
T ss_pred HHccCCcCCCHHHHHHHc---CCCEEEEeCCcH-HHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC
Confidence 334688999999999999 499999999875 478889999999999962 2221 11 4577799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
|++|+||||+..||++|+++|+.++.+..
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCA 187 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECC
Confidence 99999999999999999999999999854
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.2e-12 Score=125.49 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=74.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CC--cce---ee--cCCCCHHH---------
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YF--SNK---EI--YPGQKTTH--------- 112 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~F--d~i---e~--~~~~Kp~~--------- 112 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++.+++.+ +.. .+ +.. +. ...+.|..
T Consensus 70 ~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 70 LETAEIREGFHEFVQFVKENNIPFYVVSGGMD-FFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred HhCCCcCcCHHHHHHHHHHcCCeEEEECCCcH-HHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 45678999999999999999999999999998 8999999988 643 22 111 00 11122221
Q ss_pred -HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 113 -FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 113 -f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
...++++++..+.+|+||||+.+|+.+|+++|+.+
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 35788999999999999999999999999999943
|
|
| >KOG3109|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.6e-12 Score=123.48 Aligned_cols=99 Identities=22% Similarity=0.273 Sum_probs=86.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----------cCCCCHHHHHHHHHHcC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----------YPGQKTTHFESLKKATG 121 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----------~~~~Kp~~f~~ale~lg 121 (538)
.++|.+-.+++|-.|+.++ .++.||+.. ..+..+|+.+|+.+.|+.+.. .+++.++.|+.+++..|
T Consensus 98 ~LkPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~ag 174 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAG 174 (244)
T ss_pred hcCCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhC
Confidence 3777788999999999886 899999999 999999999999999998722 22333488999999999
Q ss_pred CC-CCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 122 IE-YKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 122 i~-P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+. |.+++||+||.++|++|++.|+.++++....
T Consensus 175 i~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 175 IDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 98 9999999999999999999999999997543
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.8e-12 Score=127.13 Aligned_cols=135 Identities=11% Similarity=0.030 Sum_probs=95.0
Q ss_pred ceEEEeCCCCCChh--h---Hhhhh-c---hh--HHHHHHHHhh-hcCCCccCCCHHHHHHHhhhCCceEEEEcCCC---
Q psy8912 17 KMVVFDLDYTLWPL--H---VHDLV-A---PF--KKIGQKVMDA-KGTLIKYYRGVPEILRYLKENKCLVAAASRTS--- 81 (538)
Q Consensus 17 KaVIFDlDGTLw~~--~---~~~~i-~---~~--~~~~~~i~~~-~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~--- 81 (538)
-+|+||+|||+.+. . ..... + ++ .+.+...+.. ......++||+.++|+.|+++|++++++||++
T Consensus 64 ~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k 143 (237)
T PRK11009 64 MAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATK 143 (237)
T ss_pred cEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 39999999999642 1 11111 1 12 2222333332 35567899999999999999999999999964
Q ss_pred cHHHHHHHHHHcCC--CCCCcceeecC-CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCc
Q psy8912 82 EILHAKQILNLINL--NQYFSNKEIYP-GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 82 ~p~~~~~~L~~lgL--~~~Fd~ie~~~-~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
....++.+++.+|+ .++|+.+-... ..|+... .+++++++ ++||||+..|+.+|+++|+.+|.|.||...
T Consensus 144 ~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~-~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 144 TETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKT-QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred cHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHH-HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence 21566777777999 78887642111 1233322 25566776 999999999999999999999999998763
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-12 Score=121.89 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=77.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-------------------------cC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-------------------------YP 106 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-------------------------~~ 106 (538)
....++||+.++|+.|+++|++++|+||+.. ..++..++.+++..+|+.+.. .+
T Consensus 69 ~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 69 KSAPIDPGFKEFIAFIKEHGIDFIVISDGND-FFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred HhCCCCccHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 3468999999999999999999999999988 889999999999999887521 01
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
..|++.+..+.++. |++|+||||+.+|+.+|+++++-+
T Consensus 148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 13677787776654 899999999999999999987653
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.5e-12 Score=128.52 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 110 TTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 110 p~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|.+|..++++++.++++|+||||+. .||.+|+++||.+++|.+|....+..... +..|+++..+..
T Consensus 193 ~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~-~~~p~~v~~sl~ 259 (269)
T COG0647 193 PAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA-EVKPTYVVDSLA 259 (269)
T ss_pred HHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh-ccCCcchHhhHH
Confidence 3679999999999999999999996 59999999999999999999877765533 567787776543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-12 Score=125.05 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=80.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++|+|++.. ..+..|+++|+.+||+.+.... . ++++.|.++++++|++|++|
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~ 180 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDS--RLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEA 180 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCch--hHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHE
Confidence 357899999999999999999999998753 4578899999999999433221 1 34566999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEE
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCI 516 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i 516 (538)
++|||+. .||++|+++|+++|
T Consensus 181 ~~IgD~~~~Di~~A~~aG~~~i 202 (203)
T TIGR02252 181 LHIGDSLRNDYQGARAAGWRAL 202 (203)
T ss_pred EEECCCchHHHHHHHHcCCeee
Confidence 9999997 89999999999987
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-12 Score=116.64 Aligned_cols=133 Identities=28% Similarity=0.492 Sum_probs=108.2
Q ss_pred ceEEEeCCCCCChhhHhhhh-chhHHHH-HHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 17 KMVVFDLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i-~~~~~~~-~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++++||+|||||++.-.+.+ |||++.. ..+.++....+++||.++++++++|++|+.++.+|-+.. ..+-+.|+.++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~-~kA~~aLral~ 79 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE-DKAIKALRALD 79 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch-HHHHHHHHHhc
Confidence 37999999999998866666 9999888 777788888999999999999999999999999999977 89999999999
Q ss_pred CCCCCcceeecCCC-CHHHHHHHHHH------cCCCCCcEEEEeCCcccHHHHhh-cC-CeEEEE
Q psy8912 95 LNQYFSNKEIYPGQ-KTTHFESLKKA------TGIEYKDMVFFDDEERNSHDVSP-LG-VTCIHS 150 (538)
Q Consensus 95 L~~~Fd~ie~~~~~-Kp~~f~~ale~------lgi~P~e~L~IGDs~~DI~aAk~-aG-~~tI~V 150 (538)
+.+||+.+.+-|.+ |-.|..+++++ ..++|++++|++|+..-+..-.. .| ++|+..
T Consensus 80 ~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~ 144 (164)
T COG4996 80 LLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEM 144 (164)
T ss_pred hhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEe
Confidence 99999998776665 33555444443 45899999999999776555554 33 345444
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-12 Score=122.62 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=81.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---------CCchHHHHHHHHHhCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---------GQKTTHFANLKKATGIE 491 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---------~~k~~~~~kal~~lgi~ 491 (538)
.+.++||+.++|++|+ ++++|+|+++.. .+...|+.+|+.+||+.+.... .++++.|+++++++|++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~-~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRA-HARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHH-HHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 4678999999999997 589999998754 7889999999999999433321 23466799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
|++|+||||+..|+++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.8e-12 Score=129.81 Aligned_cols=214 Identities=13% Similarity=0.116 Sum_probs=135.0
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeec-cccccchh-hhHHhhhCCCcccccccccCcchhhhhh-hhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALAS-RTVHIRNA-YSLLHLLGLSDFFDYKEIFPAEKKIKHF-ANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 377 (538)
+-|-.|+|. ..||.+.+.++.|+++|++++++| |+...+.. ..-|..+|+. ....||++|..-+.+| +....
T Consensus 6 ~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~--~~~~~i~ts~~~~~~~l~~~~~ 83 (279)
T TIGR01452 6 IFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN--GLAEQLFSSALCAARLLRQPPD 83 (279)
T ss_pred EEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CChhhEecHHHHHHHHHHhhCc
Confidence 457888886 579999999999999999999987 55433322 2456778985 4579999995444433 33111
Q ss_pred CcCCCccceEEeecC-------CCCcCCC--C---------CC-cccccccccchHhhhcCCCCccCCCHHHHHHHHHHC
Q psy8912 378 DSKIKYKDMVFFDDE-------ERNARSI--S---------KL-GVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQN 438 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld-------h~~~s~~--~---------p~-~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~ 438 (538)
. ...+.++=-+ +..+.-. + +. ...........+.=.+.. ---|+|+.++|++|+++
T Consensus 84 ~----~~~v~~iG~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d~-~~~y~~i~~~l~~L~~~ 158 (279)
T TIGR01452 84 A----PKAVYVIGEEGLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYDE-HFSYAKLREACAHLREP 158 (279)
T ss_pred C----CCEEEEEcCHHHHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEEecCC-CCCHHHHHHHHHHHhcC
Confidence 1 1123332111 1111100 0 00 000000001111111111 22489999999999999
Q ss_pred CceEEEEeCCCchHHHHHHHhhcCCcccccccee------e--cCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHc
Q psy8912 439 NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI------F--PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVS 509 (538)
Q Consensus 439 GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i------~--~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk 509 (538)
|+ ++|+|+++........+...|+..||+.... . ..+.+..|..+++++|++|++|+||||+ ..||++|+
T Consensus 159 g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~ 237 (279)
T TIGR01452 159 GC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGH 237 (279)
T ss_pred CC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHH
Confidence 97 8999987643111123445677777773221 1 1234567999999999999999999999 59999999
Q ss_pred ccCCEEEEECCCCCHH
Q psy8912 510 PLGVTCIHVKDGMSHS 525 (538)
Q Consensus 510 ~aGi~~i~V~dg~t~~ 525 (538)
++|+++++|.||.+..
T Consensus 238 ~aGi~si~V~~G~~~~ 253 (279)
T TIGR01452 238 RCGMTTVLVLSGVSRL 253 (279)
T ss_pred HcCCcEEEECCCCCCH
Confidence 9999999999997754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=123.34 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=100.9
Q ss_pred hhhcccCcCCCccceEEeecC--CCCcCCCCCCcccccc-c--------ccchHhhh----cCCCCccCCCHHHHHHHHH
Q psy8912 372 FANLKKDSKIKYKDMVFFDDE--ERNARSISKLGVIGIQ-V--------HRDKVLDA----GGAIIKYYRDVPAILKYLK 436 (538)
Q Consensus 372 ~~~~~~~~~~~~~~l~~~Dld--h~~~s~~~p~~~i~i~-~--------~~~~i~d~----~~~~v~l~pGv~e~L~~Lk 436 (538)
+..|++.-+-+.|..++||+| -.|.|... |. +.. + ......+. ......++||+.++|++|+
T Consensus 51 ~~~~~~~~~~~~p~av~~DIDeTvldnsp~~-~~--~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 51 VAQIEKSLEGRPPMAVGFDIDDTVLFSSPGF-WR--GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred HHHhhhhccCCCCcEEEEECcCccccCCchh-ee--eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 356777778888999999999 34443211 11 111 1 11111222 2335678999999999999
Q ss_pred HCCceEEEEeCCC---chHHHHHHHhhcCC--ccccccceeecCC---chHHHHHHHHHhCCCCCcEEEEecccccHHhH
Q psy8912 437 QNNCLVAAASRTT---EMLRAHQLVDLFNW--NQHFDHKEIFPGQ---KTTHFANLKKATGIEYKDMVFFDDEERNSHDV 508 (538)
Q Consensus 437 ~~GiklaIASss~---~~~~a~~~L~~lgL--~~yFd~~~i~~~~---k~~~~~kal~~lgi~pee~l~~eDs~~~I~aA 508 (538)
++|++++++|+.. ....++.+++.+|+ .++|+. +..++ |.... .+++++++ +|||||+.+|+++|
T Consensus 128 ~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v--il~gd~~~K~~K~-~~l~~~~i----~I~IGDs~~Di~aA 200 (237)
T PRK11009 128 KRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV--IFAGDKPGQYTKT-QWLKKKNI----RIFYGDSDNDITAA 200 (237)
T ss_pred HCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE--EEcCCCCCCCCHH-HHHHhcCC----eEEEcCCHHHHHHH
Confidence 9999999999843 23367777888999 899983 33332 33332 35566665 99999999999999
Q ss_pred cccCCEEEEECCCCCH
Q psy8912 509 SPLGVTCIHVKDGMSH 524 (538)
Q Consensus 509 k~aGi~~i~V~dg~t~ 524 (538)
++||+.+++|.||++.
T Consensus 201 ~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 201 REAGARGIRILRAANS 216 (237)
T ss_pred HHcCCcEEEEecCCCC
Confidence 9999999999998764
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-11 Score=147.12 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=90.0
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc-cccccceeec-----CCchHHHHHHHHHhCCCCCcEE
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN-QHFDHKEIFP-----GQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~-~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~l 496 (538)
.++||+.++|++|+++|++++|+|++... .++..|+++|+. .||+...... .++++.|+++++++|++|++||
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~-~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRI-KVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHH-HHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 47999999999999999999999998754 888899999996 7999433222 2457789999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
||||+..|+++|+++|+.+|+|.++.+.++
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~ 269 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCIAVTTTLSEEI 269 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 999999999999999999999999876544
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-11 Score=123.31 Aligned_cols=95 Identities=11% Similarity=0.126 Sum_probs=80.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++ ++++++|+++.. ++.+||.+||+.+.... .++++.|.++++++|++|++
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 182 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ------PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGE 182 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCch------HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhH
Confidence 4578999999999999976 999999987643 48899999999533221 14567799999999999999
Q ss_pred EEEEecc-cccHHhHcccCCEEEEECCC
Q psy8912 495 MVFFDDE-ERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 495 ~l~~eDs-~~~I~aAk~aGi~~i~V~dg 521 (538)
|++|||+ ..|+.+|+++|+.++.|..+
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 9999999 59999999999999999764
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-11 Score=125.27 Aligned_cols=136 Identities=13% Similarity=0.164 Sum_probs=103.3
Q ss_pred cceEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC-------------
Q psy8912 384 KDMVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT------------- 449 (538)
Q Consensus 384 ~~l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~------------- 449 (538)
..+++||-| ..+..-...|. ..+...+.+|||+.++|++|+++|++++|+|+++
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~ 69 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQ------------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFD 69 (354)
T ss_pred CcEEEEeCCCCccCCCCcccc------------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHh
Confidence 458999999 33331111222 1233458899999999999999999999999851
Q ss_pred -chHHHHHHHhhcCCccccccceee----------cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 450 -EMLRAHQLVDLFNWNQHFDHKEIF----------PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 450 -~~~~a~~~L~~lgL~~yFd~~~i~----------~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
..+.+..+++.+|+. |+...+. ..+++..+..++++++++|++++||||+..|+++|+++|+++|.|
T Consensus 70 ~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 70 PPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred hHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 123567788999984 6532222 124567799999999999999999999999999999999999999
Q ss_pred -CCCCCHHHHHHHHHH
Q psy8912 519 -KDGMSHSVLHKGLKQ 533 (538)
Q Consensus 519 -~dg~t~~~~~~~l~~ 533 (538)
+++++|++..+-|..
T Consensus 148 ~~~~~~~~~i~~~l~~ 163 (354)
T PRK05446 148 ARETLNWDAIAEQLTK 163 (354)
T ss_pred ECCCCCHHHHHHHHhc
Confidence 668999987776653
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-11 Score=128.90 Aligned_cols=90 Identities=21% Similarity=0.281 Sum_probs=83.4
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh----cCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL----FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~----lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
+|||+.++|++|+++|++++|+|+++. ..+..+|++ +++.+||+...+...+|++.+.++++++|+.|++|||||
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfid 110 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFID 110 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEEC
Confidence 689999999999999999999999975 588999999 999999997767777899999999999999999999999
Q ss_pred cccccHHhHcccCCE
Q psy8912 500 DEERNSHDVSPLGVT 514 (538)
Q Consensus 500 Ds~~~I~aAk~aGi~ 514 (538)
|+..++.++++++..
T Consensus 111 D~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 111 DNPAERANVKITLPV 125 (320)
T ss_pred CCHHHHHHHHHHCCC
Confidence 999999999997764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.8e-11 Score=106.24 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=84.4
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---------------------CCc
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---------------------GQK 477 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---------------------~~k 477 (538)
.....++||+.++|+.|+++|++++++|++.. ..++..++.+++..+|+...... .++
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 45688999999999999999999999999875 48889999999987777321111 346
Q ss_pred hHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 478 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 478 ~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
+..+..++++++.+++++++|||+..|+++|+++|+.+++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 99 PDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 77799999999999999999999999999999999999875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-11 Score=114.90 Aligned_cols=86 Identities=9% Similarity=0.169 Sum_probs=78.6
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++|+|+++.. .++.+++++|+.+||+. ..+|++.+.++++++|++|++|+||||+.+|+.++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~-~~~~~l~~~gi~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ 110 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAK-LVEDRCKTLGITHLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEK 110 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCH-HHHHHHHHcCCCEEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 899999999999999999865 78899999999999983 3578999999999999999999999999999999999
Q ss_pred cCCEEEEECCCC
Q psy8912 511 LGVTCIHVKDGM 522 (538)
Q Consensus 511 aGi~~i~V~dg~ 522 (538)
+|+. ++|.++.
T Consensus 111 ag~~-~~v~~~~ 121 (154)
T TIGR01670 111 VGLS-VAVADAH 121 (154)
T ss_pred CCCe-EecCCcC
Confidence 9997 8887753
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-11 Score=113.97 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=76.4
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-ee----------------cCCCCHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EI----------------YPGQKTTHF 113 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~----------------~~~~Kp~~f 113 (538)
...+.++||+.++++.|+++|++++|+|++.. ..++..++.+|+..+|... .. .+..|+..+
T Consensus 69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l 147 (177)
T TIGR01488 69 ARQVALRPGARELISWLKERGIDTVIVSGGFD-FFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVL 147 (177)
T ss_pred HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHH
Confidence 34567889999999999999999999999988 9999999999998766532 00 112356778
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhc
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~a 143 (538)
..+++++|+++++|++|||+.+|+.+++.+
T Consensus 148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 148 KELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 888899999999999999999999998753
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.8e-11 Score=115.76 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=86.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---------------cCCchHHHHHH
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------PGQKTTHFANL 484 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------------~~~k~~~~~ka 484 (538)
.++.++||+.++|++|+++|++++|+|++... .++.+++++|+..+|...... +.+|++.+.++
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMC-LAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 45789999999999999999999999999754 889999999998888632111 12344678888
Q ss_pred HHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 485 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 485 l~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++++|++|++|+||||+.+|+++|+++|+.++..+++.
T Consensus 156 ~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 156 KRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 89999999999999999999999999999998877653
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.5e-11 Score=116.74 Aligned_cols=98 Identities=22% Similarity=0.281 Sum_probs=78.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc--cee--ec--CCchHHHHHHHHHhCCCCCc
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH--KEI--FP--GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~--~~i--~~--~~k~~~~~kal~~lgi~pee 494 (538)
.+.++||+.++|++|+++ +++.++|+++.. .....++.+++..||+. ..+ .. ..|++.|+.+++++| |++
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~-~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~ 147 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTALGDS-IDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRV 147 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCCccc-hhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCc
Confidence 467999999999999997 467777776533 44446788888876641 112 11 257888999999999 899
Q ss_pred EEEEecccccHHhHccc--CCEEEEECCCC
Q psy8912 495 MVFFDDEERNSHDVSPL--GVTCIHVKDGM 522 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~a--Gi~~i~V~dg~ 522 (538)
|+||||+..|+++|++| |+++|+|.||.
T Consensus 148 ~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 148 VCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred EEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 99999999999999999 99999999985
|
2 hypothetical protein; Provisional |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.9e-11 Score=111.37 Aligned_cols=89 Identities=16% Similarity=0.137 Sum_probs=76.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee----ecCCchHHHHHHHHHhCCCCCcEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----FPGQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i----~~~~k~~~~~kal~~lgi~pee~l 496 (538)
....+||+.++|+.|+++|++++|+|++... .+...++.+ +.+||+.... ...++++.|.++++++|++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~-~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLR-AQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchH-HHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 4567899999999999999999999999865 778888988 8899984322 22346777999999999999 999
Q ss_pred EEecccccHHhHcccC
Q psy8912 497 FFDDEERNSHDVSPLG 512 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aG 512 (538)
+|||+..|+++|+++|
T Consensus 139 ~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 139 HVGDNLNDIEGARNAG 154 (154)
T ss_pred EEeCCHHHHHHHHHcc
Confidence 9999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >KOG2914|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.4e-11 Score=118.99 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=90.9
Q ss_pred chHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcC-CccccccceeecC-------CchHHHHH
Q psy8912 412 DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN-WNQHFDHKEIFPG-------QKTTHFAN 483 (538)
Q Consensus 412 ~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lg-L~~yFd~~~i~~~-------~k~~~~~k 483 (538)
....+.+.....+.||+..+++.|+.+|+++|+||++++. .++..+++++ +.+.|+....+++ +.|+.|+.
T Consensus 81 ~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~-~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~ 159 (222)
T KOG2914|consen 81 EEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSA-SFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLK 159 (222)
T ss_pred HHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcc-cHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHH
Confidence 3445566667889999999999999999999999999765 5666677766 7777874444222 45777999
Q ss_pred HHHHhCCCC-CcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 484 LKKATGIEY-KDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 484 al~~lgi~p-ee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+++.+|..| +.||+|||+..|+++|++||+.||+|++
T Consensus 160 A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 160 AAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred HHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 999999999 9999999999999999999999999998
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.5e-11 Score=115.95 Aligned_cols=88 Identities=11% Similarity=0.049 Sum_probs=75.4
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec----CCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP----GQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~----~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
.+.+++.++|+.|+++|++++|+|++++. .++..|+++|+..||+...... .++++.|.++++++|++|++|++|
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRK-DAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHH-HHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 35667799999999999999999998754 8899999999999999432221 245777999999999999999999
Q ss_pred ecccccHHhHccc
Q psy8912 499 DDEERNSHDVSPL 511 (538)
Q Consensus 499 eDs~~~I~aAk~a 511 (538)
||+.+|+++|+++
T Consensus 185 GD~~~Di~aA~~a 197 (197)
T TIGR01548 185 GDTVDDIITGRKA 197 (197)
T ss_pred eCCHHHHHHHHhC
Confidence 9999999999975
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.3e-11 Score=114.55 Aligned_cols=94 Identities=15% Similarity=0.208 Sum_probs=80.0
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc-eee---------------cCCCCHHHHHHHH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEI---------------YPGQKTTHFESLK 117 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~-ie~---------------~~~~Kp~~f~~al 117 (538)
..++|++.++|+.++++|++++|+|++.. ..++.+++.+|+..+|.. +.. .+..|+..+..++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~-~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLT-ILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 46899999999999999999999999998 899999999999888765 211 0112456688889
Q ss_pred HHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 118 KATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 118 e~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
++.++++++|+++||+.+|+.+++.+|..++
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~ 195 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYV 195 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHHHHhCCCcEE
Confidence 9999999999999999999999999998654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.7e-11 Score=113.68 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=76.5
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
...++|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+.+ .|.... +++.|.+|..+++++++++++|+||
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~-~~a~~~~~~lgi~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNE-STASAIAKQLGIFDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEH-HHHHHHHHHTTSCSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccc-cccccccccccccccccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence 346789999999999999999999998877 99999999999955 333311 3444578899999999999999999
Q ss_pred eCCcccHHHHhhcC
Q psy8912 131 DDEERNSHDVSPLG 144 (538)
Q Consensus 131 GDs~~DI~aAk~aG 144 (538)
||+.+|+.|+++||
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.8e-11 Score=115.83 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=83.6
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc----------e-ee----cCCchHHHH
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----------E-IF----PGQKTTHFA 482 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~----------~-i~----~~~k~~~~~ 482 (538)
....+.++||+.++|+.|+++|++++|+|++.. ..++.+++.+|+..+|... . .+ ..+|+..|.
T Consensus 80 ~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 158 (219)
T TIGR00338 80 VRENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLL 158 (219)
T ss_pred HHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHH
Confidence 334578999999999999999999999999875 4889999999999998521 0 01 113788899
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+++++++++|++|+||||+.+|+++|+++|+.++
T Consensus 159 ~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 159 ILLRKEGISPENTVAVGDGANDLSMIKAAGLGIA 192 (219)
T ss_pred HHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEE
Confidence 9999999999999999999999999999999864
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.5e-11 Score=118.68 Aligned_cols=107 Identities=12% Similarity=-0.037 Sum_probs=87.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHH--HHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK--QILNL 92 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~--~~L~~ 92 (538)
.+++++||+|||||. ...++||+.++|++|+++|++++++||+++ .... ..++.
T Consensus 7 ~~~~~~~D~dG~l~~-----------------------~~~~~pga~e~L~~L~~~G~~~~ivTN~~~-~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID-----------------------GNHTYPGAVQNLNKIIAQGKPVYFVSNSPR-NIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc-----------------------CCccCccHHHHHHHHHHCCCEEEEEeCCCC-ChHHHHHHHHH
Confidence 389999999999997 567899999999999999999999999987 5555 78899
Q ss_pred cCCCC-CCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 93 INLNQ-YFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 93 lgL~~-~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
+|+.. +|+.+..........+..++++++++|.+|++|||+..|++....+|.
T Consensus 63 ~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 63 LGINADLPEMIISSGEIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred CCCCccccceEEccHHHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 99987 888742211112356777788899999999999999988877755443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-10 Score=114.02 Aligned_cols=93 Identities=10% Similarity=0.050 Sum_probs=72.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc--eee------cCCCCHHHH----------
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN--KEI------YPGQKTTHF---------- 113 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~--ie~------~~~~Kp~~f---------- 113 (538)
....++||+.++|+.|+++|++++|+|++.. ..++.+++.++...++.. ... ...+.|..+
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 3578999999999999999999999999988 899999988754444421 100 111223333
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
..++++++..+++|+||||+.+|+.+|+.+|+
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 46777788889999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG4549|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.8e-11 Score=107.71 Aligned_cols=89 Identities=33% Similarity=0.371 Sum_probs=80.4
Q ss_pred ccccccccccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCc-----chhhhhhhhcccC
Q psy8912 307 AKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPA-----EKKIKHFANLKKD 378 (538)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~ 378 (538)
++|+++..|+++++|+-.||+.||.|++||||+++++|.++|+++...++|+.+ |-|+. ..|.-||..++..
T Consensus 38 ~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~ 117 (144)
T KOG4549|consen 38 SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNN 117 (144)
T ss_pred cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhc
Confidence 899999999999999999999999999999999999999999999999999864 44443 2399999999999
Q ss_pred cCCCccceEEeecCCCC
Q psy8912 379 SKIKYKDMVFFDDEERN 395 (538)
Q Consensus 379 ~~~~~~~l~~~Dldh~~ 395 (538)
|...++..++||..-+|
T Consensus 118 s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 118 SNSIEKNKQVFDDESRN 134 (144)
T ss_pred cCcchhceeeecccccC
Confidence 99999999999976444
|
|
| >KOG2882|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=117.97 Aligned_cols=64 Identities=11% Similarity=-0.085 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhcCCeEEEECCCCCchHhHHhhC---CCCCCEEEeC
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHSWLMMSSGRLKEATG---IDYKDMIYFD 174 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~aG~~tI~V~~G~~~~~~~~~l~---~~~~d~Ii~d 174 (538)
.++..++++++++|++|+||||+.. ||.-|+++|+++++|.+|..+.+..+... ...||+++..
T Consensus 228 ~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~ 295 (306)
T KOG2882|consen 228 FMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADS 295 (306)
T ss_pred HHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhh
Confidence 5689999999999999999999975 99999999999999999998877766542 2235554443
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=112.63 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=82.7
Q ss_pred cCC-CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cC----------CCCHHHHH
Q psy8912 51 GTL-IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YP----------GQKTTHFE 114 (538)
Q Consensus 51 ~~~-~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~----------~~Kp~~f~ 114 (538)
... ..++||+.++++.++++|++++|+|++.. ..++.+.+.+|++..+... +. +. ..|-....
T Consensus 72 ~~~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~ 150 (212)
T COG0560 72 REEFLRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALR 150 (212)
T ss_pred HHhcCcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHH
Confidence 444 88999999999999999999999999998 9999999999998766543 10 11 12557788
Q ss_pred HHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 115 SLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 115 ~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
..++++|+++++++++||+.+|+.+-+.+|...+
T Consensus 151 ~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia 184 (212)
T COG0560 151 ELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184 (212)
T ss_pred HHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeE
Confidence 9999999999999999999999999999999743
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=109.48 Aligned_cols=126 Identities=16% Similarity=0.076 Sum_probs=94.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------------
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------ 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------ 83 (538)
.+++++|.||||....-. ++ .......+.||+.+.+..|++.|++++++||.+-.
T Consensus 5 ~k~lflDRDGtin~d~~~-yv------------~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~ 71 (181)
T COG0241 5 QKALFLDRDGTINIDKGD-YV------------DSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDK 71 (181)
T ss_pred CcEEEEcCCCceecCCCc-cc------------CcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHH
Confidence 589999999999432110 10 01235789999999999999999999999995321
Q ss_pred --HHHHHHHHHcCCCCCCcce-------e---ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 84 --LHAKQILNLINLNQYFSNK-------E---IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 84 --~~~~~~L~~lgL~~~Fd~i-------e---~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
......|+..|. .|+.+ + ...+++|.+++.+++++++++++.++|||+..|+++|.++|+..+.+.
T Consensus 72 ~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~ 149 (181)
T COG0241 72 LHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVL 149 (181)
T ss_pred HHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEE
Confidence 344555666663 34433 1 122345689999999999999999999999999999999999988887
Q ss_pred CCCCc
Q psy8912 152 LMMSS 156 (538)
Q Consensus 152 ~G~~~ 156 (538)
.|...
T Consensus 150 ~~~~~ 154 (181)
T COG0241 150 TGIGV 154 (181)
T ss_pred cCccc
Confidence 76543
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=113.52 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=85.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC-----CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++|++.++|++|+++ ++++++|+...+ .....|+++||.+|||.+.+... +.++.|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~-~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARP-HQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChH-HHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 588999999999999999 999999986654 78889999999999995444332 34666999999999999999
Q ss_pred EEEecccccH-HhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNS-HDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I-~aAk~aGi~~i~V~dg 521 (538)
++|||+..+. .+|+++|+++|.+..+
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCC
Confidence 9999998776 9999999999987764
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.4e-10 Score=111.78 Aligned_cols=122 Identities=12% Similarity=0.075 Sum_probs=85.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-ee-----------cCCCCHHHHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EI-----------YPGQKTTHFESLKK 118 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~-----------~~~~Kp~~f~~ale 118 (538)
...+.++||+.++|+.|+++| +++|+|++.. ..++.+++.+|+..+|... +. ..+..+......++
T Consensus 64 ~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~-~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 64 IATLKPLEGAVEFVDWLRERF-QVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK 141 (203)
T ss_pred HHhCCCCccHHHHHHHHHhCC-eEEEEeCChH-HHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH
Confidence 345689999999999999985 9999999998 9999999999999888632 11 11112233444445
Q ss_pred HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 119 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 119 ~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
+.+. +|++|||+.+|+.+++.+|...+.... .. +....||+-+..+..+++..+.+
T Consensus 142 ~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak----~~----~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 142 SLYY---RVIAAGDSYNDTTMLSEAHAGILFHAP----EN----VIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred hhCC---CEEEEeCCHHHHHHHHhCCCCEEecCC----HH----HHHhCCCCCcccCHHHHHHHHHH
Confidence 5553 899999999999999999998654421 11 22334555555555565554443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=110.95 Aligned_cols=80 Identities=11% Similarity=0.150 Sum_probs=72.7
Q ss_pred HHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc
Q psy8912 432 LKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 432 L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a 511 (538)
+..|+++|++++|+|+++.+ .++..|+++|+.+||+.. .+|++.+..+++++|++|++|++|||+.+|+.+++.+
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~-~~~~~l~~lgi~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~a 117 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSG-AVRHRAEELKIKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRV 117 (169)
T ss_pred HHHHHHCCCEEEEEECCCcH-HHHHHHHHCCCcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHC
Confidence 67788999999999999765 889999999999999832 5788999999999999999999999999999999999
Q ss_pred CCEEE
Q psy8912 512 GVTCI 516 (538)
Q Consensus 512 Gi~~i 516 (538)
|+.++
T Consensus 118 g~~~a 122 (169)
T TIGR02726 118 GLAVA 122 (169)
T ss_pred CCeEE
Confidence 98765
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-10 Score=121.62 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=85.1
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-c-------------ee-ecCCch
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-K-------------EI-FPGQKT 478 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~-------------~i-~~~~k~ 478 (538)
+.+.....+.++||+.++|++|+++|++++|+|++... .++.+++++|+...|.. . .+ ....|+
T Consensus 172 il~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~-~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~ 250 (322)
T PRK11133 172 ILQQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTY-FADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKA 250 (322)
T ss_pred HHHHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcch-hHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHH
Confidence 34444556889999999999999999999999998764 78888999999765430 0 01 122688
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEE
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
+.+.++++++|++|++|++|||+.+|+..+++||+.++.
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 889999999999999999999999999999999997764
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.6e-10 Score=109.49 Aligned_cols=84 Identities=13% Similarity=0.173 Sum_probs=74.6
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
.++.|+++|++++|+|+.+.. .+..+++.+|+..||+ ...+|+..+.++++++|++|++|+||||+.+|+.++++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~-~v~~~l~~lgl~~~f~----g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSK-LVEDRMTTLGITHLYQ----GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcH-HHHHHHHHcCCceeec----CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 678888999999999998754 8899999999999997 33468899999999999999999999999999999999
Q ss_pred cCCEEEEECC
Q psy8912 511 LGVTCIHVKD 520 (538)
Q Consensus 511 aGi~~i~V~d 520 (538)
+|+.+ +|.+
T Consensus 131 aG~~~-~v~~ 139 (183)
T PRK09484 131 VGLSV-AVAD 139 (183)
T ss_pred CCCeE-ecCC
Confidence 99995 4643
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.5e-10 Score=112.02 Aligned_cols=45 Identities=7% Similarity=0.003 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHcCCCCCcE-EEEeCCc-ccHHHHhhcCCeEEEECCC
Q psy8912 109 KTTHFESLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~-L~IGDs~-~DI~aAk~aG~~tI~V~~G 153 (538)
+|.+|..++++++++++++ +||||+. .||.+|+++|+.+++|.+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 190 SPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred CHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 4577999999999999887 9999998 7999999999999999875
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.6e-10 Score=106.43 Aligned_cols=115 Identities=18% Similarity=0.085 Sum_probs=92.0
Q ss_pred CCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCc--eEEEEcCCC------cHHH
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKC--LVAAASRTS------EILH 85 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~Gi--kiaIvTn~~------~p~~ 85 (538)
.-+|+|+||.|+||.+ .....+.|...+.+++|++.+. +++|+||+. ....
T Consensus 39 ~Gik~li~DkDNTL~~---------------------~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~ 97 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTP---------------------PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGER 97 (168)
T ss_pred cCceEEEEcCCCCCCC---------------------CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHH
Confidence 3589999999999954 2356788889999999999865 599999983 2266
Q ss_pred HHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCC-----CCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCC
Q psy8912 86 AKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGI-----EYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi-----~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~ 154 (538)
++.+-+.+|+. .|- ...+||..+.++++.++. .|+++++|||.. .||.+|..+|+.+|+|..|.
T Consensus 98 a~~~~~~lgIp-vl~----h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 98 AEALEKALGIP-VLR----HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHHHHHhhCCc-EEE----eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 77777888853 222 245788878888887765 499999999996 69999999999999998875
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.04 E-value=5e-10 Score=116.17 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=134.8
Q ss_pred ccccccccccc---cccchHHHHHHhhhcCcceeeecccc-c--cchhhhHHhhhCCCcccccccccCcchhhhhhhhcc
Q psy8912 303 RVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTV-H--IRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLK 376 (538)
Q Consensus 303 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (538)
-+-|-.|+|.+ +||.+.+.++.|+++|+++.++|=.+ . .+++. -|.++|+. +...||+.+..-+.++-+..
T Consensus 31 ~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~-~l~~lGi~--~~~~~I~ts~~~~~~~l~~~ 107 (311)
T PLN02645 31 FIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGK-KFESLGLN--VTEEEIFSSSFAAAAYLKSI 107 (311)
T ss_pred EEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHH-HHHHCCCC--CChhhEeehHHHHHHHHHhh
Confidence 36688999986 89999999999999999999998544 2 23333 45789986 56789999965666665543
Q ss_pred cCcCCCccceEEeecC-------CCCcCCCCCCcccc--ccccc----------chHhhhcCCCCccCCCHHHHHHHHHH
Q psy8912 377 KDSKIKYKDMVFFDDE-------ERNARSISKLGVIG--IQVHR----------DKVLDAGGAIIKYYRDVPAILKYLKQ 437 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~--i~~~~----------~~i~d~~~~~v~l~pGv~e~L~~Lk~ 437 (538)
.-++- ..+.+++-+ +..+..+..+.-.. ..... ..|.=.+.. ---|.........|++
T Consensus 108 ~~~~~--~~V~viG~~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvvg~d~-~~~~~~l~~a~~~l~~ 184 (311)
T PLN02645 108 NFPKD--KKVYVIGEEGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVVGFDR-YINYYKIQYATLCIRE 184 (311)
T ss_pred ccCCC--CEEEEEcCHHHHHHHHHCCCEEecCccccccccccccccccccCCCCCEEEEecCC-CCCHHHHHHHHHHHhc
Confidence 22211 247777654 22221111000000 00000 000000000 0012223334455554
Q ss_pred CCceEEEEeCCCchHHHHHHHhhcCCccccccceeec--------CCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhH
Q psy8912 438 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP--------GQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDV 508 (538)
Q Consensus 438 ~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~--------~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aA 508 (538)
++=.+.|+|+.+..-.....+..+|+..||+...... .+++..|..++++++++|++|+||||+. .||.+|
T Consensus 185 ~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 185 NPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 3235889998775311233456678888888332211 2345569999999999999999999997 999999
Q ss_pred cccCCEEEEECCCCCHH
Q psy8912 509 SPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 509 k~aGi~~i~V~dg~t~~ 525 (538)
+++|+++++|.+|.+..
T Consensus 265 ~~aG~~~ilV~~G~~~~ 281 (311)
T PLN02645 265 QNGGCKTLLVLSGVTSE 281 (311)
T ss_pred HHcCCCEEEEcCCCCCH
Confidence 99999999999997653
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-09 Score=107.45 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=80.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc--cccccce-----------------eecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHKE-----------------IFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~--~yFd~~~-----------------i~~~~k~~~~~ 482 (538)
..++||+.++|++|+++|++++|+|++... .++.+|+.+|+. ++|.... ....+|++.++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~-~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQ-MIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHH-HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 568999999999999999999999999865 889999999997 4664100 01225788889
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++++++|. ++|+||||+.+|+++|+++|+.++...++.
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~ 199 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGV 199 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCC
Confidence 99888875 689999999999999999999887665543
|
|
| >KOG4549|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.5e-10 Score=98.37 Aligned_cols=113 Identities=25% Similarity=0.323 Sum_probs=98.3
Q ss_pred CccceEEeecC----------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch
Q psy8912 382 KYKDMVFFDDE----------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM 451 (538)
Q Consensus 382 ~~~~l~~~Dld----------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~ 451 (538)
+||+.++|||| |.+. ||+ | +... -.++|++...|++++.+|..|+++|+.|++||++..+
T Consensus 3 ~~p~~~~fdldytiwP~~vdthl~~----pfk-P---~k~~--~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap 72 (144)
T KOG4549|consen 3 EKPEAMQFDLDYTIWPRLVDTHLDY----PFK-P---FKCE--CGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAP 72 (144)
T ss_pred CCCceeEEeccceeeeEEEEecccc----ccc-c---cccC--cccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCH
Confidence 48999999999 8887 555 1 1111 1279999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCc---------cccccceeecCCchHHHHHHHHHhCCCCCcEEEEeccccc
Q psy8912 452 LRAHQLVDLFNWN---------QHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERN 504 (538)
Q Consensus 452 ~~a~~~L~~lgL~---------~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~ 504 (538)
+.|.+.|+.+.+. ..|.+...+++.|-.||...-...++...+..+|+|..++
T Consensus 73 ~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 73 QIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred HHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccccC
Confidence 9999999999975 3566777888999999999999999999999999999988
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.03 E-value=8e-10 Score=121.81 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=89.2
Q ss_pred CCceEEEeCCCCCChhh-HhhhhchhHHHHHHHHhhhcCCCc-cCCCHHHHHHHhhhCCceEEEEcCCCcH---------
Q psy8912 15 FPKMVVFDLDYTLWPLH-VHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI--------- 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~-~~~~i~~~~~~~~~i~~~~~~~~~-l~pgv~elL~~Lk~~GikiaIvTn~~~p--------- 83 (538)
..|+++||+||||+.+- ...+. ......+ ++||+.+.|+.|++.|++++|+||.+..
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~------------~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFP------------KGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred cCcEEEEECCCCccccCCCccCC------------CCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 46899999999997521 00010 0011233 6899999999999999999999997662
Q ss_pred --HHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcC----CCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 84 --LHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATG----IEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 84 --~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lg----i~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
..+..+++.+|+. |+.+.. ..+++|.++..++++++ +++++++||||+..|+.+|+++|..
T Consensus 235 ~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 235 FKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred HHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 2477889999975 665411 22345699999999985 8999999999999999999888764
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-09 Score=89.88 Aligned_cols=72 Identities=17% Similarity=0.111 Sum_probs=63.1
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 105 YPGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 105 ~~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
.+++.|.+|..++++++++|++|+||||+ ..||.+|+++|+.+|+|.+|....+.... ....||+|+.+..+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~-~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEK-AEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHH-SSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhc-cCCCCCEEECCHHh
Confidence 35677899999999999999999999999 89999999999999999999988777665 34689999887543
|
... |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.7e-10 Score=107.00 Aligned_cols=132 Identities=12% Similarity=0.130 Sum_probs=89.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-----------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI----------- 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p----------- 83 (538)
-||+|++|+|.||...+-..+..|. ..... -...+-|....+++.|++.|++++|||=++..
T Consensus 42 GIk~Va~D~DnTlI~~HsgG~~~~~-~~~~~------~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~I 114 (219)
T PTZ00445 42 GIKVIASDFDLTMITKHSGGYIDPD-NDDIR------VLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYI 114 (219)
T ss_pred CCeEEEecchhhhhhhhcccccCCC-cchhh------hhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCccee
Confidence 5899999999999441111010000 00000 01235677889999999999999999976551
Q ss_pred ---HHHHHHHHHcCCC----CCC---cce---------eecCCCCHHH--H--HHHHHHcCCCCCcEEEEeCCcccHHHH
Q psy8912 84 ---LHAKQILNLINLN----QYF---SNK---------EIYPGQKTTH--F--ESLKKATGIEYKDMVFFDDEERNSHDV 140 (538)
Q Consensus 84 ---~~~~~~L~~lgL~----~~F---d~i---------e~~~~~Kp~~--f--~~ale~lgi~P~e~L~IGDs~~DI~aA 140 (538)
+.++..|+.-+.. ..| ... ...-++.|.+ | +.+++++|+.|++|+||+|+..++++|
T Consensus 115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA 194 (219)
T PTZ00445 115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA 194 (219)
T ss_pred chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH
Confidence 2566677755432 111 110 0111233455 7 999999999999999999999999999
Q ss_pred hhcCCeEEEECCC
Q psy8912 141 SPLGVTCIHSWLM 153 (538)
Q Consensus 141 k~aG~~tI~V~~G 153 (538)
+++|++++++..+
T Consensus 195 ~~lGi~ai~f~~~ 207 (219)
T PTZ00445 195 LKEGYIALHVTGN 207 (219)
T ss_pred HHCCCEEEEcCCh
Confidence 9999999999753
|
|
| >KOG3085|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=108.23 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=86.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...+.+++.++|++|+++|+.+++.|+.+ ++.+.+|..+|+..|||...... .+.++.|+.+++++|+.|+||
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d--~r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFD--DRLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCc--HHHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 45577888899999999999999999775 46789999999999999432211 144666999999999999999
Q ss_pred EEEeccccc-HHhHcccCCEEEEECCCCCHH
Q psy8912 496 VFFDDEERN-SHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 496 l~~eDs~~~-I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+++||...+ +++|+++|++.+.|-+..+.-
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~ 219 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWHAILVDNSITAL 219 (237)
T ss_pred EEecCccccccHhHHHcCCEEEEEccccchh
Confidence 999999766 999999999999998876554
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.7e-10 Score=104.94 Aligned_cols=83 Identities=12% Similarity=0.098 Sum_probs=70.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|+ +++|+|+++.. ..+..|+++||.+||+.+... .. +.++.|+++++++|++|++|
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~-~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHW-AFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHH-HHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 5789999999998 48999998754 778899999999999943221 11 34666999999999999999
Q ss_pred EEEecccccHHhHccc
Q psy8912 496 VFFDDEERNSHDVSPL 511 (538)
Q Consensus 496 l~~eDs~~~I~aAk~a 511 (538)
++|||+.+|+++|+++
T Consensus 160 l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQWDLIGARKF 175 (175)
T ss_pred EeEecChhhHHHHhcC
Confidence 9999999999999874
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-09 Score=106.32 Aligned_cols=102 Identities=9% Similarity=0.039 Sum_probs=77.5
Q ss_pred hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccccceeecC-----Cch--H----
Q psy8912 413 KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKEIFPG-----QKT--T---- 479 (538)
Q Consensus 413 ~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd~~~i~~~-----~k~--~---- 479 (538)
.+.+.+...+.++||+.++|++|+++|++++|+|++... .++.+|+++ +.. +|......++ .++ .
T Consensus 64 ~~~~~~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~-~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~ 141 (219)
T PRK09552 64 EIIQFLLETAEIREGFHEFVQFVKENNIPFYVVSGGMDF-FVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHC 141 (219)
T ss_pred HHHHHHHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHH-HHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccc
Confidence 344555566899999999999999999999999999864 889999998 644 3210011111 111 1
Q ss_pred ------HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 480 ------HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 480 ------~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
....++++++.++++|+||||+.+|+.+|++||+.++
T Consensus 142 ~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 142 QNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred cccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 1357888999999999999999999999999999443
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-09 Score=103.17 Aligned_cols=104 Identities=7% Similarity=0.014 Sum_probs=83.6
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc-ccccceeecC---CchHHHHHHHHHhCCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPG---QKTTHFANLKKATGIEY 492 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~-yFd~~~i~~~---~k~~~~~kal~~lgi~p 492 (538)
.+...+...||+.|+|++|.+. +.++|.|++.+ ..|+++|+.++... +|+....... .++ .|.+.+..+|.++
T Consensus 36 ~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~-~~~K~L~~l~~~~ 112 (162)
T TIGR02251 36 IIPVYVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPVLDILDRGGKVISRRLYRESCVFTNG-KYVKDLSLVGKDL 112 (162)
T ss_pred EEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHHHHHHCcCCCEEeEEEEccccEEeCC-CEEeEchhcCCCh
Confidence 3444578999999999999988 99999999975 59999999999876 8873211111 122 2788899999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++||+|||+..++.++.++|+.+.......+
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~ 143 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWFGDPN 143 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCCCCCC
Confidence 9999999999999999999999877764433
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.8e-09 Score=98.21 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=77.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH---cCCCCCCcce---eecCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL---INLNQYFSNK---EIYPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~---lgL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P 124 (538)
.-..++||++.+.|++-+++|++++|.|+++- ....-.... .++..+|+.. .+.++....-|.+++...|++|
T Consensus 99 elkahlypDav~~ik~wk~~g~~vyiYSSGSV-~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 99 ELKAHLYPDAVQAIKRWKALGMRVYIYSSGSV-KAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccccCHhHHHHHHHHHHcCCcEEEEcCCCc-hhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCc
Confidence 44568999999999999999999999999976 333222221 1333444433 2333344578999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
.+++|+.|.+..+.||+.+||.++++.
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~ 204 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAV 204 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeee
Confidence 999999999999999999999988775
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.3e-09 Score=98.81 Aligned_cols=91 Identities=9% Similarity=0.081 Sum_probs=73.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---------------------cC----
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------------PG---- 475 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------------------~~---- 475 (538)
.+.++||+.++|++|+++|++++|+|++... .++.+++++|+.++|+.+... +.
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDF-FIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHH-HHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 3789999999999999999999999998754 788899999999999832210 10
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.|+..+..+.++. |++|+||||+.+|+++|+++++.+
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 2555555555443 899999999999999999997654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.8e-09 Score=100.09 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=76.5
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-------cC--CchHHHHHHHHHhCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-------PG--QKTTHFANLKKATGI 490 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-------~~--~k~~~~~kal~~lgi 490 (538)
..+.++||+.++|++|+++ ++++|+|++... .++.+|+++|+..||...... .. .++.....++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYE-FAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHH-HHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 3577999999999999999 999999999764 889999999999998632111 11 233445666777778
Q ss_pred CCCcEEEEecccccHHhHcccCCEEE
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
.+++|++|||+.+|+.+++++|+.+.
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 88999999999999999999998654
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.9e-08 Score=98.82 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
|+..++.+++++|+++++|++|||+.+|+.+++.+|+ ++.+.+ .... .+ ..+++|+.+ ..+.....+.
T Consensus 200 K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~vamgn--a~~~-lk----~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 200 KGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GVAMGN--ADDA-VK----ARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred hHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eEEecC--chHH-HH----HhCCEEEecCCCCcHHHHHH
Confidence 5566888999999999999999999999999999997 344433 3332 22 246887755 4444444443
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.7e-09 Score=100.80 Aligned_cols=153 Identities=14% Similarity=0.129 Sum_probs=101.6
Q ss_pred ccccccCcchhhhh-----hhhcccCcCCCccceEEeecCCCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHH
Q psy8912 358 DYKEIFPAEKKIKH-----FANLKKDSKIKYKDMVFFDDEERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAI 431 (538)
Q Consensus 358 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Dldh~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~ 431 (538)
-++|.|-.+||..| |+..-+..+++ ++++|+|.==+.-- --|-.+ .+.. .... -.+-|....+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~v~~L~~~GIk---~Va~D~DnTlI~~HsgG~~~~-----~~~~-~~~~--~~~tpefk~~ 83 (219)
T PTZ00445 15 EYIESGLFDHLNPHESADKFVDLLNECGIK---VIASDFDLTMITKHSGGYIDP-----DNDD-IRVL--TSVTPDFKIL 83 (219)
T ss_pred HHHHhcccccCCHHHHHHHHHHHHHHcCCe---EEEecchhhhhhhhcccccCC-----Ccch-hhhh--ccCCHHHHHH
Confidence 35666555566554 77776777775 79999991111000 012211 0000 0111 2356889999
Q ss_pred HHHHHHCCceEEEEeCCCchH--------------HHHHHHhhcCCc----ccccc-ce------eecC-----Cch---
Q psy8912 432 LKYLKQNNCLVAAASRTTEML--------------RAHQLVDLFNWN----QHFDH-KE------IFPG-----QKT--- 478 (538)
Q Consensus 432 L~~Lk~~GiklaIASss~~~~--------------~a~~~L~~lgL~----~yFd~-~~------i~~~-----~k~--- 478 (538)
++.|++.|++++|+|=|+... .++.+|+.-+.. ..|.+ .- -+.. +.+
T Consensus 84 ~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK 163 (219)
T PTZ00445 84 GKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDK 163 (219)
T ss_pred HHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccch
Confidence 999999999999999988644 678889865543 33321 00 0000 112
Q ss_pred -HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 479 -THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 479 -~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
-|+++++++.|++|+||+||||+..+|++|++.|++++.++++
T Consensus 164 ~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 164 SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 3349999999999999999999999999999999999999864
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.3e-08 Score=96.23 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
|+..+..+++.+|++++++++|||+.+|+.+++.+|.. +.+.++. . ..+. .+++|..+ ..+.....+.
T Consensus 158 Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~--~-~vk~----~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 158 KGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG-VAVANAD--E-ELKE----AADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce-EEecCcc--H-HHHH----hcceEecCCCcChHHHHHH
Confidence 45568888999999999999999999999999999985 4565433 2 2222 35677654 3444444443
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.6e-08 Score=109.16 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=76.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecCCCCHH-HHHHHHHHcCCCCCcEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYPGQKTT-HFESLKKATGIEYKDMV 128 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~~~Kp~-~f~~ale~lgi~P~e~L 128 (538)
..+++||+.+++++++++|++++++|++++ ..++.+++.+|+ |+.+. .....||+ -...+.+.++ .++++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~-~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~ 143 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDE-RLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFD 143 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCee
Confidence 345679999999999999999999999988 999999999987 66551 12222221 1223335554 36689
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHH
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKE 161 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~ 161 (538)
++||+.+|+.+++.+| +++.|+.+.......+
T Consensus 144 yvGDS~~Dlp~~~~A~-~av~Vn~~~~l~~~a~ 175 (479)
T PRK08238 144 YAGNSAADLPVWAAAR-RAIVVGASPGVARAAR 175 (479)
T ss_pred EecCCHHHHHHHHhCC-CeEEECCCHHHHHHHH
Confidence 9999999999999999 7888987665444433
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.5e-09 Score=98.87 Aligned_cols=98 Identities=15% Similarity=0.184 Sum_probs=82.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-cee-e--------------cCCchHHHHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEI-F--------------PGQKTTHFANLK 485 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i-~--------------~~~k~~~~~kal 485 (538)
..++||+.++|++++++|++++|+|++..+ .++.+++++|+.++|.. ... . ...|+..+..++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~-~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTI-LVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 458999999999999999999999999865 88999999999998863 111 0 113556688888
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.++++++|++++|+..|+..++.+|..++..++
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 88999999999999999999999999998876665
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.1e-09 Score=96.51 Aligned_cols=114 Identities=15% Similarity=0.220 Sum_probs=91.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhc---CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKG---TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~---~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
++|.++||+||||.+-.+. +++.. ..+.+.+|. -++.|.+.|++++|+|+... ..++...+
T Consensus 7 ~IkLli~DVDGvLTDG~ly-------------~~~~Gee~KaFnv~DG~--Gik~l~~~Gi~vAIITGr~s-~ive~Ra~ 70 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLY-------------YDENGEEIKAFNVRDGH--GIKLLLKSGIKVAIITGRDS-PIVEKRAK 70 (170)
T ss_pred hceEEEEeccceeecCeEE-------------EcCCCceeeeeeccCcH--HHHHHHHcCCeEEEEeCCCC-HHHHHHHH
Confidence 4999999999999552110 01111 123344553 37888899999999999999 99999999
Q ss_pred HcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 92 LINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 92 ~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
.+|+..+|..+ ..|-..|.++++++++.|++|.||||..+|+..-.+.|..++
T Consensus 71 ~LGI~~~~qG~----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 71 DLGIKHLYQGI----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred HcCCceeeech----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 99998888763 456789999999999999999999999999999999999743
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-08 Score=92.96 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=80.7
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCc--hHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQK--TTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k--~~~~~kal~~lgi~pee~l~~eDs 501 (538)
.-|.+++-+.++++.|+++-|+|+++ +..+..+++.+|+. .++...| +..|.+|+++++++|++|++|||+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~-e~RV~~~~~~l~v~------fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDq 119 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNK-ESRVARAAEKLGVP------FIYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQ 119 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCC-HHHHHhhhhhcCCc------eeecccCccHHHHHHHHHHcCCChhHEEEEcch
Confidence 44788899999999999999999876 55888889988874 3455555 455999999999999999999999
Q ss_pred c-ccHHhHcccCCEEEEECCCCCHHHHHHHH
Q psy8912 502 E-RNSHDVSPLGVTCIHVKDGMSHSVLHKGL 531 (538)
Q Consensus 502 ~-~~I~aAk~aGi~~i~V~dg~t~~~~~~~l 531 (538)
. .|+.++.++|++||.|..=...+.|..-+
T Consensus 120 L~TDVlggnr~G~~tIlV~Pl~~~d~~~t~~ 150 (175)
T COG2179 120 LFTDVLGGNRAGMRTILVEPLVAPDGWITKI 150 (175)
T ss_pred hhhhhhcccccCcEEEEEEEeccccchhhhh
Confidence 5 68999999999999996633333343333
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.6e-08 Score=101.33 Aligned_cols=122 Identities=19% Similarity=0.166 Sum_probs=86.0
Q ss_pred CCceEEEeCCCCCChhh-H-hh-hh--chhH-HHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHH
Q psy8912 15 FPKMVVFDLDYTLWPLH-V-HD-LV--APFK-KIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHA 86 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~-~-~~-~i--~~~~-~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~ 86 (538)
.+.+||||+|+|+.+.. . .. .. .++. ..+.+... .....++||+.++|+.|+++|++++++||++.. ...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~--~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQ--AAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHH--cCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 46899999999995433 1 11 11 3442 23444433 346679999999999999999999999998741 344
Q ss_pred HHHHHHcCCCCCC-cce--eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhh
Q psy8912 87 KQILNLINLNQYF-SNK--EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 87 ~~~L~~lgL~~~F-d~i--e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~ 142 (538)
...|+.+|+...+ +.+ .....+|+..+..+.+.+++ +++|||+..|+..+..
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNLLDFDDFFY 206 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCHHHhhhhhc
Confidence 5788889987644 433 11234577888888887777 9999999999865433
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.5e-08 Score=97.23 Aligned_cols=88 Identities=13% Similarity=0.133 Sum_probs=74.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
..++||+.++|++|+++|++++++|+-+ +..+..+.+.+||.+ +|.. ....+.++.|.+++++|+++|++|+|||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~-~~~a~~~~~~lgi~~~~v~a~--~~~kP~~k~~~~~i~~l~~~~~~v~~vG 202 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDN-ESTASAIAKQLGIFDSIVFAR--VIGKPEPKIFLRIIKELQVKPGEVAMVG 202 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSE-HHHHHHHHHHTTSCSEEEEES--HETTTHHHHHHHHHHHHTCTGGGEEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccc-ccccccccccccccccccccc--ccccccchhHHHHHHHHhcCCCEEEEEc
Confidence 4689999999999999999999999665 568999999999966 4442 1123344567999999999999999999
Q ss_pred cccccHHhHcccC
Q psy8912 500 DEERNSHDVSPLG 512 (538)
Q Consensus 500 Ds~~~I~aAk~aG 512 (538)
|+.+|+.++++||
T Consensus 203 Dg~nD~~al~~Ag 215 (215)
T PF00702_consen 203 DGVNDAPALKAAG 215 (215)
T ss_dssp SSGGHHHHHHHSS
T ss_pred cCHHHHHHHHhCc
Confidence 9999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-09 Score=102.13 Aligned_cols=131 Identities=13% Similarity=0.042 Sum_probs=93.7
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHH-HHH-H--hhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIG-QKV-M--DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~-~~i-~--~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
+++++|+|+||.......... .... -.+ . ......+...||+.++|+.|.+. +.++|.|+++. .+++.+++.
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~il~~ 77 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKV--DADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPVLDI 77 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCC--CCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHHHHH
Confidence 579999999995432111000 0000 000 0 01233456779999999999988 99999999998 999999999
Q ss_pred cCCCC-CCcceee---cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 93 INLNQ-YFSNKEI---YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 93 lgL~~-~Fd~ie~---~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
++... +|+.+-. ....++. |.+.++.+|.++++|++|||++.++.++.++|+.+.....
T Consensus 78 ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 78 LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCC
Confidence 99765 7776511 1111233 7788888999999999999999999999999998766653
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >KOG3040|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.7e-08 Score=93.90 Aligned_cols=120 Identities=19% Similarity=0.182 Sum_probs=91.1
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~l 93 (538)
++.|++|+-|||.. .....||+.+.|+.|+.++.++-.+||.... ..+...|.++
T Consensus 7 v~gvLlDlSGtLh~-----------------------e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rl 63 (262)
T KOG3040|consen 7 VKGVLLDLSGTLHI-----------------------EDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRL 63 (262)
T ss_pred cceEEEeccceEec-----------------------ccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHh
Confidence 78999999999976 3448899999999999999999999998662 2333344444
Q ss_pred CCC---------------------------------CCCcce--------------------------------------
Q psy8912 94 NLN---------------------------------QYFSNK-------------------------------------- 102 (538)
Q Consensus 94 gL~---------------------------------~~Fd~i-------------------------------------- 102 (538)
|+. ++|+.+
T Consensus 64 gf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~gidTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LI 143 (262)
T KOG3040|consen 64 GFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFDGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLI 143 (262)
T ss_pred CCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCCCccCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEE
Confidence 331 123222
Q ss_pred ---------------------------------eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhcCCeEE
Q psy8912 103 ---------------------------------EIYPGQKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCI 148 (538)
Q Consensus 103 ---------------------------------e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~aG~~tI 148 (538)
.+.+++.|..|+.+++.+|++|++|+||||..+ |+-.|.++||+.|
T Consensus 144 ai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgi 223 (262)
T KOG3040|consen 144 AIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGI 223 (262)
T ss_pred EecCceeeeeccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeE
Confidence 011222335699999999999999999999976 8999999999999
Q ss_pred EECCCCCchH
Q psy8912 149 HSWLMMSSGR 158 (538)
Q Consensus 149 ~V~~G~~~~~ 158 (538)
+|.+|--...
T Consensus 224 lVkTGK~rps 233 (262)
T KOG3040|consen 224 LVKTGKFRPS 233 (262)
T ss_pred EeeccccCCc
Confidence 9999876553
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.74 E-value=3e-08 Score=104.10 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=83.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-C-------CCCCCcceeecCCCCHH-----------
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------LNQYFSNKEIYPGQKTT----------- 111 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-g-------L~~~Fd~ie~~~~~Kp~----------- 111 (538)
...+.++||+.++|+.|+++|++++|+||++. ..++.+++.+ | |.++||.+. .+..||.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~-~yt~~im~~l~g~~~~~~~w~~yFD~II-t~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDY-DYTDKGMKYLLGPFLGEHDWRDYFDVVI-VDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhhCCcccccchHhhCcEEE-eCCCCCcccCCCCceEEE
Confidence 44567799999999999999999999999999 9999999996 7 889999762 2222221
Q ss_pred ------------------------HHHHHHHHcCCCCCcEEEEeCCcc-cHHHHh-hcCCeEEEECC
Q psy8912 112 ------------------------HFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHSWL 152 (538)
Q Consensus 112 ------------------------~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk-~aG~~tI~V~~ 152 (538)
......+.+|+++++++||||.+. ||.+|+ .+||++++|..
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred eCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 157778889999999999999975 999998 89999999965
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.3e-08 Score=94.57 Aligned_cols=114 Identities=19% Similarity=0.137 Sum_probs=82.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|+||+||||+.. ...+.|...+.|++|+++|++++++|+++. ..+...++.+++
T Consensus 1 ik~v~~DlDGTLl~~----------------------~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~-~~~~~~~~~l~~ 57 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP----------------------NRMISERAIEAIRKAEKKGIPVSLVTGNTV-PFARALAVLIGT 57 (215)
T ss_pred CcEEEEecCCCcCCC----------------------CcccCHHHHHHHHHHHHCCCEEEEEcCCcc-hhHHHHHHHhCC
Confidence 579999999999861 234667788888888888899999998877 666666666654
Q ss_pred CCCCc--------------------------------------------c------------------------------
Q psy8912 96 NQYFS--------------------------------------------N------------------------------ 101 (538)
Q Consensus 96 ~~~Fd--------------------------------------------~------------------------------ 101 (538)
..++- .
T Consensus 58 ~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 137 (215)
T TIGR01487 58 SGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGF 137 (215)
T ss_pred CCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCc
Confidence 31100 0
Q ss_pred -eeec--CCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 102 -KEIY--PGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 102 -ie~~--~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
+++. +..|...++.+++.+|++++++++|||+.+|+.+.+.+|+. +.+.++
T Consensus 138 ~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~-vam~na 191 (215)
T TIGR01487 138 AIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK-VAVANA 191 (215)
T ss_pred eEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe-EEcCCc
Confidence 0000 11234558888999999999999999999999999999986 445443
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-08 Score=92.08 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=76.9
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee-----------------ecCCchH
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----------------FPGQKTT 479 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i-----------------~~~~k~~ 479 (538)
.....+.++||+.++|++|+++|++++|+|++... .++.+++++|+..+|..... ....|+.
T Consensus 67 ~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~-~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 67 FLARQVALRPGARELISWLKERGIDTVIVSGGFDF-FVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGK 145 (177)
T ss_pred HHHhcCCcCcCHHHHHHHHHHCCCEEEEECCCcHH-HHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHH
Confidence 44456779999999999999999999999999754 88999999999887752111 1114666
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHccc
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a 511 (538)
.+.+..+++|+++++|++|||+.+|+.+++.+
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 78888888999999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.5e-07 Score=93.38 Aligned_cols=124 Identities=10% Similarity=0.009 Sum_probs=88.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----------eec-CCC--------CH-H
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----------EIY-PGQ--------KT-T 111 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----------e~~-~~~--------Kp-~ 111 (538)
..+.+.||+.++++.|+++|++++|+|++.. ..++.+++.+|+...+..+ ... +.+ |. .
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~ 196 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD 196 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence 5789999999999999999999999999998 9999999999986444333 011 111 22 4
Q ss_pred HHHHHHHHcC--CCCCcEEEEeCCcccHHHHhhc-C---CeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 112 HFESLKKATG--IEYKDMVFFDDEERNSHDVSPL-G---VTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 112 ~f~~ale~lg--i~P~e~L~IGDs~~DI~aAk~a-G---~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
.++.+++.++ .++++|++|||+.+|+.||... . +-.|++.+.. .++.++.... .=|.|+.++...
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~-~e~~l~~y~~-~~Divl~~D~t~ 267 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDR-VDELLEKYMD-SYDIVLVQDETL 267 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccC-HHHHHHHHHH-hCCEEEECCCCc
Confidence 5667888998 8999999999999999998766 2 2344554432 2233333333 336666665433
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.4e-08 Score=95.33 Aligned_cols=93 Identities=5% Similarity=0.026 Sum_probs=72.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-ceeecC-------CchHHH----------
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEIFPG-------QKTTHF---------- 481 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i~~~-------~k~~~~---------- 481 (538)
..+.++||+.++|++|+++|++++|+|++.. ..++.+|+.++..++|.+ .....+ +.+..+
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 3588999999999999999999999999975 488999998865555521 011111 112222
Q ss_pred HHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 482 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 482 ~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
..++++++..+++|+||||+.+|+.+|++||+
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 46777788899999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.8e-08 Score=92.07 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=76.0
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcH------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEI------------ 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p------------ 83 (538)
|...||+||||..+.-... +........++ |++.+.|++|.+.|++++|+||....
T Consensus 1 Kia~fD~DgTLi~~~s~~~-----------f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK-----------FPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT-----------S-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc-----------CcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 5789999999943211000 00012344555 58999999999999999999996221
Q ss_pred -HHHHHHHHHcCCCCCC--cce-eecCCCCHHHHHHHHHHcCC----CCCcEEEEeCC-----------cccHHHHhhcC
Q psy8912 84 -LHAKQILNLINLNQYF--SNK-EIYPGQKTTHFESLKKATGI----EYKDMVFFDDE-----------ERNSHDVSPLG 144 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~F--d~i-e~~~~~Kp~~f~~ale~lgi----~P~e~L~IGDs-----------~~DI~aAk~aG 144 (538)
.....+++.+++.-.+ ... +.+.++.|.++..+++.++. +.++++||||+ ..|.+-|.++|
T Consensus 70 ~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~g 149 (159)
T PF08645_consen 70 HEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCG 149 (159)
T ss_dssp HHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT
T ss_pred HHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcC
Confidence 3455667777765211 110 12233445899999998874 88999999996 57899999999
Q ss_pred CeEE
Q psy8912 145 VTCI 148 (538)
Q Consensus 145 ~~tI 148 (538)
++..
T Consensus 150 i~f~ 153 (159)
T PF08645_consen 150 IKFY 153 (159)
T ss_dssp --EE
T ss_pred Cccc
Confidence 9853
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.5e-07 Score=90.40 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|...+..+++++|++++++++|||+.+|+.+++.+|.. +.+.++
T Consensus 150 K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na 193 (225)
T TIGR01482 150 KGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANA 193 (225)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCCh
Confidence 55668899999999999999999999999999999995 556543
|
catalyze the same reaction as SPP. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.1e-07 Score=90.91 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=92.3
Q ss_pred hcCCCccCCCHHHHHHHh--hhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-------------cC-------C
Q psy8912 50 KGTLIKYYRGVPEILRYL--KENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-------------YP-------G 107 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~L--k~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-------------~~-------~ 107 (538)
....+++.||+.++++.+ ++.|+.+.|+|.+.. -..+.+|+..|+.+.|+.+-. .+ .
T Consensus 66 ~l~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs-~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 66 ALRSIPIDPGMKELLRFLAKNQRGFDLIIISDANS-FFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred HHHcCCCCccHHHHHHHHHhcCCCceEEEEeCCcH-hHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCc
Confidence 356788899999999999 457999999999988 999999999999988876511 00 1
Q ss_pred -----CCHHHHHHHHHH---cCCCCCcEEEEeCCcccHHHHhhcCCe-EEEECCCCCchHhHHhhC-CCCCCEEEeCCch
Q psy8912 108 -----QKTTHFESLKKA---TGIEYKDMVFFDDEERNSHDVSPLGVT-CIHSWLMMSSGRLKEATG-IDYKDMIYFDDEQ 177 (538)
Q Consensus 108 -----~Kp~~f~~ale~---lgi~P~e~L~IGDs~~DI~aAk~aG~~-tI~V~~G~~~~~~~~~l~-~~~~d~Ii~d~~~ 177 (538)
+|-.+....++. -|+...+++||||+.+|+=++.+++-. .+....|+.......+-. ...+..+....+.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~ 224 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGE 224 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHH
Confidence 233445555554 478889999999999999999887664 566667776555444311 1233444444444
Q ss_pred hhH
Q psy8912 178 EHV 180 (538)
Q Consensus 178 ~~~ 180 (538)
+++
T Consensus 225 ~i~ 227 (234)
T PF06888_consen 225 EIL 227 (234)
T ss_pred HHH
Confidence 443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=95.40 Aligned_cols=201 Identities=13% Similarity=0.139 Sum_probs=125.9
Q ss_pred cccccccccc---cccchHHHHHHhhhcCcceeeec----cccccchhhhHHhhhCCCcccccccccCc-chhhhhhhhc
Q psy8912 304 VEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALAS----RTVHIRNAYSLLHLLGLSDFFDYKEIFPA-EKKIKHFANL 375 (538)
Q Consensus 304 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 375 (538)
+-|-.|||.+ .+|.+.+.+.+|+++|++.+++| |++ ......|..+|+.- ...||+.+ .--..|++..
T Consensus 5 ~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~--~~~~~~l~~~g~~~--~~~~iit~~~~~~~~l~~~ 80 (249)
T TIGR01457 5 LIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTP--ESVAEMLASFDIPA--TLETVFTASMATADYMNDL 80 (249)
T ss_pred EEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCH--HHHHHHHHHcCCCC--ChhhEeeHHHHHHHHHHhc
Confidence 3466777754 67899999999999999999998 555 45677889999964 56789988 4344556543
Q ss_pred ccCcCCCccceEEeecC-------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCC
Q psy8912 376 KKDSKIKYKDMVFFDDE-------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 448 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss 448 (538)
+ ++..+.++--+ +.++...+ . ....++-.+ .....|+.+...+..|+ +|.+ .++|+.
T Consensus 81 ~-----~~~~v~~lg~~~l~~~l~~~g~~~~~--~------~~~~Vvvg~-~~~~~y~~l~~a~~~l~-~g~~-~i~tN~ 144 (249)
T TIGR01457 81 K-----LEKTVYVIGEEGLKEAIKEAGYVEDK--E------KPDYVVVGL-DRQIDYEKFATATLAIR-KGAH-FIGTNG 144 (249)
T ss_pred C-----CCCEEEEEcChhHHHHHHHcCCEecC--C------CCCEEEEeC-CCCCCHHHHHHHHHHHH-CCCe-EEEECC
Confidence 2 23344444322 12221000 0 011111112 12345667777777774 6887 677765
Q ss_pred CchHHHHH--H-HhhcCCccccccc---e--eecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEEC
Q psy8912 449 TEMLRAHQ--L-VDLFNWNQHFDHK---E--IFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 449 ~~~~~a~~--~-L~~lgL~~yFd~~---~--i~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~ 519 (538)
+.. .-.. . ...-.+..+|... + ....+++..|..+++.++++|++|++|||+. .||.+|+++|++++.|.
T Consensus 145 D~~-~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~ 223 (249)
T TIGR01457 145 DLA-IPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVH 223 (249)
T ss_pred CCC-CCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEc
Confidence 432 1000 0 0111111222210 1 1223456779999999999999999999997 89999999999999999
Q ss_pred CCCCHH
Q psy8912 520 DGMSHS 525 (538)
Q Consensus 520 dg~t~~ 525 (538)
+|.+..
T Consensus 224 ~G~~~~ 229 (249)
T TIGR01457 224 TGVTKA 229 (249)
T ss_pred CCCCCH
Confidence 997643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.9e-07 Score=88.53 Aligned_cols=97 Identities=12% Similarity=0.084 Sum_probs=69.6
Q ss_pred CccCCCHHHHH-HHhhhCCceEEEEcCCCcHHHHHHHHHHcCC---CCCCcce-ee-cCC------CC-HHHHHHHHHHc
Q psy8912 54 IKYYRGVPEIL-RYLKENKCLVAAASRTSEILHAKQILNLINL---NQYFSNK-EI-YPG------QK-TTHFESLKKAT 120 (538)
Q Consensus 54 ~~l~pgv~elL-~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL---~~~Fd~i-e~-~~~------~K-p~~f~~ale~l 120 (538)
..++||+.++| +.|+++|++++|+||++. ..++.+++.+|+ .+..... +. +.+ +. .+-...+.+.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~-~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~ 172 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQ-PLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI 172 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence 56799999999 578999999999999999 999999999885 2222111 11 111 11 12244444455
Q ss_pred CCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 121 GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 121 gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
+.+...+.+-|||.+|+.+...+|-. +.|+.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp 203 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTP 203 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC-EEECc
Confidence 76778899999999999999888875 44543
|
|
| >KOG3109|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.2e-08 Score=93.20 Aligned_cols=106 Identities=20% Similarity=0.259 Sum_probs=83.9
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC-----------CchHHHHHHHHHhCCC
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-----------QKTTHFANLKKATGIE 491 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~-----------~k~~~~~kal~~lgi~ 491 (538)
++-|-.+++|-.|+.++ .-+.|+..+ ..|..+|+++||.+.|+.+..... +.++.|.++++..|++
T Consensus 100 kPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 100 KPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred CCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 34445899999999886 778898875 478899999999999995443322 2356699999999998
Q ss_pred -CCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHH
Q psy8912 492 -YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGL 531 (538)
Q Consensus 492 -pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l 531 (538)
|..++|||||.++|++|++.|++++.|.-.-....-+.+|
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l 217 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYAL 217 (244)
T ss_pred CcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHH
Confidence 9999999999999999999999999987644333333333
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-07 Score=93.45 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=122.5
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccC-cchhh------
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFP-AEKKI------ 369 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~------ 369 (538)
+-|=+|||.+ +-|...+.++.|+++|+..++||=-+.. .+..+++.|++..++++ .-||- ...++
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~-~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l 85 (272)
T PRK10530 7 ALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHV-AIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPL 85 (272)
T ss_pred EEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChH-HHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCC
Confidence 4578899984 6778889999999999999999855544 35678899998865443 12331 11111
Q ss_pred --hhhhhcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhc-CCCCccCCCHHHHHHHHHHCCceEEEE
Q psy8912 370 --KHFANLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAG-GAIIKYYRDVPAILKYLKQNNCLVAAA 445 (538)
Q Consensus 370 --~~~~~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~-~~~v~l~pGv~e~L~~Lk~~GiklaIA 445 (538)
+-...|-+- .+...+ ..++.-|..-.+..+.+. . ......... ......++++.++++.++..+..+.++
T Consensus 86 ~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (272)
T PRK10530 86 PVQQALQVIEMLDEHQIH-GLMYVDDAMLYEHPTGHV-I----RTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFA 159 (272)
T ss_pred CHHHHHHHHHHHHhCCcE-EEEEcCCceEecCchHHH-H----HHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEE
Confidence 000111100 111111 222211210000000000 0 000000000 111235678889999988888888888
Q ss_pred eCCCch----HHHHHHHhhcCCcc---ccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 446 SRTTEM----LRAHQLVDLFNWNQ---HFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 446 Sss~~~----~~a~~~L~~lgL~~---yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
++.... ...+.+++.+++.- ++.+.++.+. +|...+.++++.+|+++++|++|||+.||++.++.+|+ .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~v 238 (272)
T PRK10530 160 LTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GV 238 (272)
T ss_pred EecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eE
Confidence 765421 24455566667652 2233344443 68888999999999999999999999999999999996 34
Q ss_pred EECC
Q psy8912 517 HVKD 520 (538)
Q Consensus 517 ~V~d 520 (538)
++.+
T Consensus 239 amgn 242 (272)
T PRK10530 239 AMGN 242 (272)
T ss_pred EecC
Confidence 4444
|
|
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.4e-07 Score=88.75 Aligned_cols=89 Identities=17% Similarity=0.238 Sum_probs=72.6
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--------CCcce-----------eecCCCCHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--------YFSNK-----------EIYPGQKTT 111 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--------~Fd~i-----------e~~~~~Kp~ 111 (538)
....++-||++++...|+++|.+++++|++-+ ..+..+...+|++. .|+.- ..-++.|++
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~-~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~ 162 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFR-QLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAE 162 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHH
Confidence 45678899999999999999999999999998 99999999999864 13321 112235778
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhh
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~ 142 (538)
.+..+.+ +.+...++||||+.+|+.|..-
T Consensus 163 ~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 163 VIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHh--CCChheeEEecCCccccccCCc
Confidence 8887766 8888999999999999887765
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=94.30 Aligned_cols=126 Identities=9% Similarity=0.045 Sum_probs=87.1
Q ss_pred ccchHhhhcC-CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc----------eeecC---
Q psy8912 410 HRDKVLDAGG-AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----------EIFPG--- 475 (538)
Q Consensus 410 ~~~~i~d~~~-~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~----------~i~~~--- 475 (538)
....+.+... ..+.+.||+.++|++|+++|++++|+|++.. ..++.+|+++|+...|..+ ....+
T Consensus 107 ~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~ 185 (277)
T TIGR01544 107 PKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG 185 (277)
T ss_pred CHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC
Confidence 4444444443 4699999999999999999999999999976 4899999999986443210 11111
Q ss_pred ------CchHH-HHHHHHHhC--CCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHHh
Q psy8912 476 ------QKTTH-FANLKKATG--IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 536 (538)
Q Consensus 476 ------~k~~~-~~kal~~lg--i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~~ 536 (538)
+|.+. ++.+.+.++ .+|++||++||+.+|+.+|.-.--..--+.=|+=.+..++.|+.|.+
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~ 255 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMD 255 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHH
Confidence 23333 456778888 89999999999999999987641111122224444555666666654
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.2e-07 Score=88.06 Aligned_cols=84 Identities=18% Similarity=0.293 Sum_probs=65.0
Q ss_pred cCCCHH----HHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc-ceeecC-----------C----CCHHHHHH
Q psy8912 56 YYRGVP----EILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS-NKEIYP-----------G----QKTTHFES 115 (538)
Q Consensus 56 l~pgv~----elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd-~ie~~~-----------~----~Kp~~f~~ 115 (538)
++|++. ++|+.++++|++++|+|+++. ..++.+++.+|+...+- ...... + .|...+..
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~ 164 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKE 164 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHH
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHH
Confidence 456666 999999999999999999988 99999999999875321 111110 0 16777777
Q ss_pred H---HHHcCCCCCcEEEEeCCcccHHHHh
Q psy8912 116 L---KKATGIEYKDMVFFDDEERNSHDVS 141 (538)
Q Consensus 116 a---le~lgi~P~e~L~IGDs~~DI~aAk 141 (538)
+ ... +..+..+++|||+.+|+.+++
T Consensus 165 ~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 165 LYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 6 445 889999999999999999875
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.1e-07 Score=93.66 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=85.8
Q ss_pred hhcCCC-CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc-ee----ecC----------CchH
Q psy8912 416 DAGGAI-IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI----FPG----------QKTT 479 (538)
Q Consensus 416 d~~~~~-v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~-~i----~~~----------~k~~ 479 (538)
+....+ ..++||+.+++++|+++|++++|+|++.. ..++++.+.+|++..+... ++ .++ .|..
T Consensus 69 ~~~~~~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~ 147 (212)
T COG0560 69 EEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAK 147 (212)
T ss_pred HHHHHhcCcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHH
Confidence 334445 89999999999999999999999999986 4999999999998776511 11 111 4677
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
.....++++|++++++++++|+.+|+---+.+|..++.-+.
T Consensus 148 ~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 148 ALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 78899999999999999999999999999999988876555
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.7e-07 Score=103.16 Aligned_cols=109 Identities=12% Similarity=0.134 Sum_probs=85.0
Q ss_pred CCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8912 53 LIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IG 131 (538)
...++||+.++|+.|+++| ++++++||.+. ..++.+++.+|+.++|.. ..+..|+..+ ++++..+++|+|||
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~~--~~p~~K~~~v----~~l~~~~~~v~~vG 454 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHAE--LLPEDKLAIV----KELQEEGGVVAMVG 454 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeecc--CCHHHHHHHH----HHHHHcCCEEEEEE
Confidence 4568999999999999999 99999999988 999999999999988886 3344455444 44444678999999
Q ss_pred CCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 132 DEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 132 Ds~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+.+|+.+++++| +++.+|...... ...+|+++.+..
T Consensus 455 Dg~nD~~al~~A~---vgia~g~~~~~~-----~~~Ad~vi~~~~ 491 (556)
T TIGR01525 455 DGINDAPALAAAD---VGIAMGAGSDVA-----IEAADIVLLNDD 491 (556)
T ss_pred CChhHHHHHhhCC---EeEEeCCCCHHH-----HHhCCEEEeCCC
Confidence 9999999999999 456666322221 135888888644
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.1e-07 Score=85.33 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=69.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee----------------------ecCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE----------------------IYPGQ 108 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie----------------------~~~~~ 108 (538)
...+.+-||.++++++++++++++.|+|++.. .....+++.++-.+-.+.++ .++..
T Consensus 69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~-~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d 147 (220)
T COG4359 69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMD-PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD 147 (220)
T ss_pred HhhcccCccHHHHHHHHHHcCCCEEEEeCCCc-hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCC
Confidence 55688999999999999999999999999999 89999999887333222221 12334
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
|+.......+ +++.++|+||+..|+.||+....-
T Consensus 148 K~~vI~~l~e----~~e~~fy~GDsvsDlsaaklsDll 181 (220)
T COG4359 148 KSSVIHELSE----PNESIFYCGDSVSDLSAAKLSDLL 181 (220)
T ss_pred cchhHHHhhc----CCceEEEecCCcccccHhhhhhhH
Confidence 5555555443 677899999999999999987653
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.5e-07 Score=96.07 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=80.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc-C-------CccccccceeecCCchHH-----------
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-N-------WNQHFDHKEIFPGQKTTH----------- 480 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l-g-------L~~yFd~~~i~~~~k~~~----------- 480 (538)
..+...||+.++|++|+++|++++|+|+++.. .++.+|+.+ | +.+|||.+ +....||.-
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~-yt~~im~~l~g~~~~~~~w~~yFD~I-It~a~KP~FF~~~~pf~~v~ 258 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYD-YTDKGMKYLLGPFLGEHDWRDYFDVV-IVDARKPGFFTEGRPFRQVD 258 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHhhCCcccccchHhhCcEE-EeCCCCCcccCCCCceEEEe
Confidence 34667999999999999999999999999864 889999996 7 89999932 122222210
Q ss_pred ------------------------HHHHHHHhCCCCCcEEEEeccc-ccHHhHc-ccCCEEEEECCCC
Q psy8912 481 ------------------------FANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCIHVKDGM 522 (538)
Q Consensus 481 ------------------------~~kal~~lgi~pee~l~~eDs~-~~I~aAk-~aGi~~i~V~dg~ 522 (538)
.....+.+|+++++++||||.. .||.+++ .+|+.+++|-..+
T Consensus 259 ~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL 326 (343)
T TIGR02244 259 VETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL 326 (343)
T ss_pred CCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence 4666777899999999999975 5799898 7999999997743
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.4e-06 Score=85.60 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=68.0
Q ss_pred CCccCCCHHHHHH-HhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----ee-cCC------C-CHHHHHHHHHH
Q psy8912 53 LIKYYRGVPEILR-YLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----EI-YPG------Q-KTTHFESLKKA 119 (538)
Q Consensus 53 ~~~l~pgv~elL~-~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----e~-~~~------~-Kp~~f~~ale~ 119 (538)
...++||+.++|+ .++++|++++|+||++. ..++.+.+..++..-.+.+ +. .++ + -.+-...+.+.
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~-~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~ 170 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQ-PLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQK 170 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcH-HHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHH
Confidence 3468999999996 78999999999999988 8899988886552222211 22 111 1 11223344444
Q ss_pred cCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 120 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 120 lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
++.+...+.+-|||.+|+.+-..+|-. +.|+
T Consensus 171 ~~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 171 IGSPLKLYSGYSDSKQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred hCCChhheEEecCCcccHHHHHhCCCc-EEEC
Confidence 566667889999999999999888875 3454
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.5e-07 Score=91.13 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEE-eCCchhhHHhhhhc
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIY-FDDEQEHVNDISKL 186 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii-~d~~~~~~~~i~~~ 186 (538)
..+.+++.+|+++++++.|||+.+|+.+-+.+|. ++.+.++. .+..+.. .. ..|+ .+..+.....+++.
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~Na~--~~vK~~A--~~-~~v~~~n~edGva~~l~~~ 261 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGR-GFIMGNAM--PQLRAEL--PH-LPVIGHCRNQAVSHYLTHW 261 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCC-ceeccCCh--HHHHHhC--CC-CeecCCCcchHHHHHHHHH
Confidence 3678889999999999999999999999999997 55565432 2322211 11 1233 33566666666654
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.7e-07 Score=78.42 Aligned_cols=98 Identities=17% Similarity=0.119 Sum_probs=62.8
Q ss_pred EEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHHcCCC
Q psy8912 19 VVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLINLN 96 (538)
Q Consensus 19 VIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~lgL~ 96 (538)
|+||+|||||. ...++||+.++|+.|+++|+++.++||++.. ......|+.+|+.
T Consensus 1 ~l~D~dGvl~~-----------------------g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYN-----------------------GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEE-----------------------TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEe-----------------------CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 68999999997 6789999999999999999999999999742 3455566788875
Q ss_pred CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 97 QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 97 ~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
--.+. +... .......+++. -....++++|-. ......+++|+
T Consensus 58 ~~~~~--i~ts--~~~~~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 58 VDEDE--IITS--GMAAAEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --GGG--EEEH--HHHHHHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred CCcCE--EECh--HHHHHHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 22222 2221 23333334432 235677778755 33445555554
|
... |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-07 Score=103.72 Aligned_cols=93 Identities=10% Similarity=0.102 Sum_probs=76.6
Q ss_pred CCCCccCCCHHHHHHHHHHCC-ceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 419 GAIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~G-iklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
..+..++||+.++|++|+++| ++++++|+.+. ..++.+++++|+.+||.. +.+.+|. +++++++..+++|+|
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~~--~~p~~K~----~~v~~l~~~~~~v~~ 452 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHAE--LLPEDKL----AIVKELQEEGGVVAM 452 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeecc--CCHHHHH----HHHHHHHHcCCEEEE
Confidence 335679999999999999999 99999998875 489999999999999983 3333444 344555557889999
Q ss_pred EecccccHHhHcccCCEEEEECCC
Q psy8912 498 FDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 498 ~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+||+.+|+.++++|| ++|.+|
T Consensus 453 vGDg~nD~~al~~A~---vgia~g 473 (556)
T TIGR01525 453 VGDGINDAPALAAAD---VGIAMG 473 (556)
T ss_pred EECChhHHHHHhhCC---EeEEeC
Confidence 999999999999999 566666
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.51 E-value=2e-07 Score=95.44 Aligned_cols=67 Identities=27% Similarity=0.373 Sum_probs=58.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
.+++|+||+||||... ...+++- ||+.++|++|+++|++++|+||+.+ ..+...++.+
T Consensus 125 ~~kvIvFDLDgTLi~~--------------------~~~v~irdPgV~EaL~~LkekGikLaIaTS~~R-e~v~~~L~~l 183 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD--------------------EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDR-DHVVESMRKV 183 (301)
T ss_pred cceEEEEecCCCCcCC--------------------CCccccCCHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHc
Confidence 4799999999999862 1234444 9999999999999999999999988 8899999999
Q ss_pred CCCCCCcce
Q psy8912 94 NLNQYFSNK 102 (538)
Q Consensus 94 gL~~~Fd~i 102 (538)
|+..+|+.+
T Consensus 184 GLd~YFdvI 192 (301)
T TIGR01684 184 KLDRYFDII 192 (301)
T ss_pred CCCcccCEE
Confidence 999999876
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.1e-07 Score=88.37 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=73.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc-ee-----ecC------CchHHHHHHHHHh
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI-----FPG------QKTTHFANLKKAT 488 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~-~i-----~~~------~k~~~~~kal~~l 488 (538)
.+.++||+.++|++|+++| +++|+|++... .+.++++++|+..+|... .+ .++ .......+.+++.
T Consensus 66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~~-~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERF-QVVILSDTFYE-FSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred hCCCCccHHHHHHHHHhCC-eEEEEeCChHH-HHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 4789999999999999985 99999999765 899999999999988621 11 111 1122244444555
Q ss_pred CCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 489 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 489 gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+ .+|++|||+.+|+..++.+|..++..+.
T Consensus 144 ~---~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 144 Y---YRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred C---CCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 5 3899999999999999999999987655
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.2e-07 Score=89.77 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
.++.+++.+|++++++++|||+.+|+.+-+.+|.. +++.++
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~-vAm~NA 234 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKG-CIMGNA 234 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCC-eeecCC
Confidence 36778889999999999999999999999999984 556554
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.2e-07 Score=102.18 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=77.0
Q ss_pred CCCccCCCHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 420 AIIKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
.+..++||+.++|++|+++|+ +++++|+.+. ..++.+++++|+.+||. ...+.+| ..++++++.++++++|+
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~--~~~p~~K----~~~i~~l~~~~~~v~~v 431 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHA--ELLPEDK----LEIVKELREKYGPVAMV 431 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhh--ccCcHHH----HHHHHHHHhcCCEEEEE
Confidence 346799999999999999999 9999998875 58999999999999997 3333334 34556666777999999
Q ss_pred ecccccHHhHcccCCEEEEECCCC
Q psy8912 499 DDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 499 eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
||+.+|+.++++||+ +|.+|.
T Consensus 432 GDg~nD~~al~~A~v---gia~g~ 452 (536)
T TIGR01512 432 GDGINDAPALAAADV---GIAMGA 452 (536)
T ss_pred eCCHHHHHHHHhCCE---EEEeCC
Confidence 999999999999995 666663
|
. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.3e-06 Score=86.17 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
..+..+++.+|++++++++|||+.+|+.+-+.+|. ++.+.++. ... +. .+++|..+ ..+.....+.+
T Consensus 199 ~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~NA~--~~v-K~----~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 199 TGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV-GVAMGNAI--PSV-KE----VAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc-eEEecCcc--HHH-HH----hcCeeccCCCcchHHHHHHH
Confidence 33677788999999999999999999999999998 45565543 222 22 35677644 44555554444
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.4e-06 Score=87.77 Aligned_cols=59 Identities=27% Similarity=0.245 Sum_probs=49.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||... ...+.+.+.++|++++++|++++++|+++. ..+...++.++
T Consensus 2 ~~kli~~DlDGTLl~~----------------------~~~i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l~ 58 (264)
T COG0561 2 MIKLLAFDLDGTLLDS----------------------NKTISPETKEALARLREKGVKVVLATGRPL-PDVLSILEELG 58 (264)
T ss_pred CeeEEEEcCCCCccCC----------------------CCccCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcC
Confidence 4799999999999751 233777889999999999999999999988 88888888886
Q ss_pred CC
Q psy8912 95 LN 96 (538)
Q Consensus 95 L~ 96 (538)
+.
T Consensus 59 ~~ 60 (264)
T COG0561 59 LD 60 (264)
T ss_pred CC
Confidence 54
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=97.29 Aligned_cols=88 Identities=18% Similarity=0.274 Sum_probs=72.5
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCch-----------HHHHHHHhhcCCccccccceeecC------CchHHHHHHHH
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEM-----------LRAHQLVDLFNWNQHFDHKEIFPG------QKTTHFANLKK 486 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~-----------~~a~~~L~~lgL~~yFd~~~i~~~------~k~~~~~kal~ 486 (538)
++|||.+.|+.|+++||+++|+|+...- ..+..+|+++|+. |+.. +.+. +++.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdvi-ia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVF-IAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEE-EeCCCCCCCCCCHHHHHHHHH
Confidence 6899999999999999999999987651 2478889999985 7732 2221 34677999999
Q ss_pred HhC----CCCCcEEEEecccccHHhHcccCCE
Q psy8912 487 ATG----IEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 487 ~lg----i~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
+++ +++++++||||+..++++++++|..
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 984 9999999999999999999988864
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.4e-06 Score=86.90 Aligned_cols=209 Identities=11% Similarity=0.085 Sum_probs=116.8
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeecccc---ccchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRTV---HIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
+-|-.|+|. +.||.+.+.+..|+++|++..+.|.++ ..+.+..+...+|+. ...+|++.|..=+.+|-+-+.
T Consensus 2 lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~--~~~~~iits~~~~~~~l~~~~ 79 (236)
T TIGR01460 2 LFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD--VSPDQIITSGSVTKDLLRQRF 79 (236)
T ss_pred EEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC--CCHHHeeeHHHHHHHHHHHhC
Confidence 346777776 589999999999999999999998443 345666666668885 678999998434444332111
Q ss_pred CcCCCccceEEeecC-------CCCcC-C-CCCCccccc-ccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeC
Q psy8912 378 DSKIKYKDMVFFDDE-------ERNAR-S-ISKLGVIGI-QVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASR 447 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld-------h~~~s-~-~~p~~~i~i-~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASs 447 (538)
+-..+.++=-+ ...+. . .+....... ....-.+..... + --+.-.......+ ++|=..-++|+
T Consensus 80 ----~~~~v~v~G~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~vv~~~~~-~-~~~~~~~~a~~~l-~~~~~~~i~tN 152 (236)
T TIGR01460 80 ----EGEKVYVIGVGELRESLEGLGFRNDFFDDIDHLAIEKIPAAVIVGEPS-D-FSYDELAKAAYLL-AEGDVPFIAAN 152 (236)
T ss_pred ----CCCEEEEECCHHHHHHHHHcCCcCcccCcccccccCCCCeEEEECCCC-C-cCHHHHHHHHHHH-hCCCCeEEEEC
Confidence 11223333222 11111 0 000000000 000001111000 0 0111222223333 35523446675
Q ss_pred CCchHHHHHHHhhcCCccccccc------e--eecCCchHHHHHHHHHhCCCCCcE-EEEeccc-ccHHhHcccCCEEEE
Q psy8912 448 TTEMLRAHQLVDLFNWNQHFDHK------E--IFPGQKTTHFANLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCIH 517 (538)
Q Consensus 448 s~~~~~a~~~L~~lgL~~yFd~~------~--i~~~~k~~~~~kal~~lgi~pee~-l~~eDs~-~~I~aAk~aGi~~i~ 517 (538)
.+.--....-....++..+|+.. . ....+++..|..++++++++++++ +||||+. .||.+|+++|++++.
T Consensus 153 ~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~ 232 (236)
T TIGR01460 153 RDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLL 232 (236)
T ss_pred CCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEE
Confidence 44210000112334555555511 1 123356777999999999999998 9999998 899999999999999
Q ss_pred ECCC
Q psy8912 518 VKDG 521 (538)
Q Consensus 518 V~dg 521 (538)
|.+|
T Consensus 233 v~~G 236 (236)
T TIGR01460 233 VLTG 236 (236)
T ss_pred EecC
Confidence 9876
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.6e-06 Score=96.59 Aligned_cols=107 Identities=13% Similarity=0.169 Sum_probs=82.9
Q ss_pred CccCCCHHHHHHHhhhCCc-eEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8912 54 IKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDD 132 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~Gi-kiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGD 132 (538)
..++||+.++|++|+++|+ +++++||.+. ..++.+++.+|+.++|.. ..+..|+. ++++++..+++++||||
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~~--~~p~~K~~----~i~~l~~~~~~v~~vGD 433 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHAE--LLPEDKLE----IVKELREKYGPVAMVGD 433 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhhc--cCcHHHHH----HHHHHHhcCCEEEEEeC
Confidence 4578999999999999999 9999999988 999999999999988876 33444444 45555556689999999
Q ss_pred CcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 133 EERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 133 s~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+.+|+.+++++|+ ++.+|....... ...+|.++.+
T Consensus 434 g~nD~~al~~A~v---gia~g~~~~~~~----~~~ad~vl~~ 468 (536)
T TIGR01512 434 GINDAPALAAADV---GIAMGASGSDVA----IETADVVLLN 468 (536)
T ss_pred CHHHHHHHHhCCE---EEEeCCCccHHH----HHhCCEEEEC
Confidence 9999999999996 455563222211 2257888854
|
. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=9e-07 Score=90.71 Aligned_cols=67 Identities=30% Similarity=0.356 Sum_probs=58.0
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
.++.|+||+||||... ...+++- |++.++|++|+++|++++|+||+++ +.+...++.+
T Consensus 127 ~~~~i~~D~D~TL~~~--------------------~~~v~irdp~V~EtL~eLkekGikLaIvTNg~R-e~v~~~Le~l 185 (303)
T PHA03398 127 IPHVIVFDLDSTLITD--------------------EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNR-EHVVHSLKET 185 (303)
T ss_pred eccEEEEecCCCccCC--------------------CCccccCChhHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHc
Confidence 4789999999999762 2234444 9999999999999999999999988 8999999999
Q ss_pred CCCCCCcce
Q psy8912 94 NLNQYFSNK 102 (538)
Q Consensus 94 gL~~~Fd~i 102 (538)
|+..+|+.+
T Consensus 186 gL~~yFDvI 194 (303)
T PHA03398 186 KLEGYFDII 194 (303)
T ss_pred CCCccccEE
Confidence 999999865
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.4e-06 Score=82.21 Aligned_cols=55 Identities=25% Similarity=0.188 Sum_probs=45.9
Q ss_pred EEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC
Q psy8912 19 VVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 96 (538)
Q Consensus 19 VIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~ 96 (538)
|+||+||||.+. ...+.|...++|+.|+++|++++++|+++. ..+...+..+++.
T Consensus 1 i~~DlDGTLl~~----------------------~~~i~~~~~~al~~l~~~g~~~~i~TGR~~-~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNS----------------------DGKISPETIEALKELQEKGIKLVIATGRSY-SSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCST----------------------TSSSCHHHHHHHHHHHHTTCEEEEECSSTH-HHHHHHHHHTTHC
T ss_pred cEEEECCceecC----------------------CCeeCHHHHHHHHhhcccceEEEEEccCcc-cccccccccccch
Confidence 689999999751 233668899999999999999999999988 8888888877553
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.6e-06 Score=83.55 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
..++.+++.+|++++++++|||+.+|+.+.+.+|+.+
T Consensus 191 ~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~ 227 (256)
T TIGR00099 191 SALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGV 227 (256)
T ss_pred HHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCcee
Confidence 3478888999999999999999999999999999863
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.1e-06 Score=94.85 Aligned_cols=106 Identities=11% Similarity=0.147 Sum_probs=79.5
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
..++||+.++|++|+++|++++++||.+. ..++.+++.+|++ +|.. ..+..|++.++. +..++++|+||||+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~~--~~p~~K~~~v~~----l~~~~~~v~~VGDg 475 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRAE--VLPDDKAALIKE----LQEKGRVVAMVGDG 475 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEcc--CChHHHHHHHHH----HHHcCCEEEEEeCC
Confidence 45689999999999999999999999988 9999999999985 4443 233344444444 34477899999999
Q ss_pred cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 134 ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 134 ~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
.+|+.+++++|+. +.+|.... .....+|+++.+.
T Consensus 476 ~nD~~al~~A~vg---ia~g~g~~-----~a~~~Advvl~~~ 509 (562)
T TIGR01511 476 INDAPALAQADVG---IAIGAGTD-----VAIEAADVVLMRN 509 (562)
T ss_pred CccHHHHhhCCEE---EEeCCcCH-----HHHhhCCEEEeCC
Confidence 9999999999973 44443322 2223578888753
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.6e-06 Score=80.16 Aligned_cols=123 Identities=13% Similarity=0.141 Sum_probs=89.3
Q ss_pred cceEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC-------------
Q psy8912 384 KDMVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT------------- 449 (538)
Q Consensus 384 ~~l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~------------- 449 (538)
++.++||.| -.|+ +-++ . .+ .-....+.||+.+.|..|++.||++.++|+-+
T Consensus 5 ~k~lflDRDGtin~-d~~~-y-----------v~-~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINI-DKGD-Y-----------VD-SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceec-CCCc-c-----------cC-cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 789999999 3454 1111 1 11 11236689999999999999999999999721
Q ss_pred -chHHHHHHHhhcCCccccccceeec--------C--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 450 -EMLRAHQLVDLFNWNQHFDHKEIFP--------G--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 450 -~~~~a~~~L~~lgL~~yFd~~~i~~--------~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
...+....|+..|. -|+...+++ + +++.+++.++++.+++++..++|||+..|+++|.++|+..+.+
T Consensus 71 ~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~ 148 (181)
T COG0241 71 KLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLV 148 (181)
T ss_pred HHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEE
Confidence 01245566777674 344222222 2 4677799999999999999999999999999999999998777
Q ss_pred CCCC
Q psy8912 519 KDGM 522 (538)
Q Consensus 519 ~dg~ 522 (538)
..|.
T Consensus 149 ~~~~ 152 (181)
T COG0241 149 LTGI 152 (181)
T ss_pred EcCc
Confidence 6653
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.4e-06 Score=80.37 Aligned_cols=89 Identities=13% Similarity=0.027 Sum_probs=64.6
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc-cccccceeecCCchHHHHHHH-HHhCCCCCcEE
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN-QHFDHKEIFPGQKTTHFANLK-KATGIEYKDMV 496 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~-~yFd~~~i~~~~k~~~~~kal-~~lgi~pee~l 496 (538)
...+.++||+.++|++|++. +.++|.|++.+ +.|..+|+.++.. .||....++...-...+.|-+ .-++.+.+.+|
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~-~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~~~vv 131 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTR-AYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRLFPADESMVV 131 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcH-HHHHHHHHHhCcCCCeeccEEEEeccCCCCccccHHHHcCCCcccEE
Confidence 34577899999999999965 99999999975 4999999999998 589421222221112344455 33588999999
Q ss_pred EEecccccHHhHc
Q psy8912 497 FFDDEERNSHDVS 509 (538)
Q Consensus 497 ~~eDs~~~I~aAk 509 (538)
+|||+..-...-.
T Consensus 132 ivDd~~~~~~~~~ 144 (156)
T TIGR02250 132 IIDDREDVWPWHK 144 (156)
T ss_pred EEeCCHHHhhcCc
Confidence 9999986544433
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.5e-06 Score=95.62 Aligned_cols=86 Identities=13% Similarity=0.124 Sum_probs=69.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
-+..++||+.++|++|+++|++++++|+.+. ..++.+++++|+. +|. ...+.+|.+ .+++++.++++|+|||
T Consensus 402 ~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~--~~~p~~K~~----~v~~l~~~~~~v~~VG 473 (562)
T TIGR01511 402 LEDQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRA--EVLPDDKAA----LIKELQEKGRVVAMVG 473 (562)
T ss_pred ecccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEc--cCChHHHHH----HHHHHHHcCCEEEEEe
Confidence 3467899999999999999999999998875 5899999999995 665 233334443 3444555789999999
Q ss_pred cccccHHhHcccCC
Q psy8912 500 DEERNSHDVSPLGV 513 (538)
Q Consensus 500 Ds~~~I~aAk~aGi 513 (538)
|+.+|+.++++||+
T Consensus 474 Dg~nD~~al~~A~v 487 (562)
T TIGR01511 474 DGINDAPALAQADV 487 (562)
T ss_pred CCCccHHHHhhCCE
Confidence 99999999999996
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.7e-05 Score=77.57 Aligned_cols=195 Identities=10% Similarity=0.074 Sum_probs=115.3
Q ss_pred cccccccccc---cccchHHHHHHhhhcCcceeeecccccc--chhhhHHhhhCCCcccccccccCcchhhhhhhhcccC
Q psy8912 304 VEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTVHI--RNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKD 378 (538)
Q Consensus 304 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (538)
+-|-.|+|.+ ++|.+.+.+.+|++.|++..++|=++.. ..-.+-|..+|+. +...||++|..=+.+|=+-+
T Consensus 5 ~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~--~~~~~i~ts~~~~~~~L~~~-- 80 (248)
T PRK10444 5 ICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD--VPDSVFYTSAMATADFLRRQ-- 80 (248)
T ss_pred EEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CCHhhEecHHHHHHHHHHhC--
Confidence 4577788764 5999999999999999999999866653 2233444667874 46778898854444443222
Q ss_pred cCCCccceEEeecC-------CCCcC--CCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 379 SKIKYKDMVFFDDE-------ERNAR--SISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 379 ~~~~~~~l~~~Dld-------h~~~s--~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
. ...+.++-=+ ..++. .-.| . ..+.. .... --|.-.......+ ++|.+ -++|+.+
T Consensus 81 ~---~~~v~~~g~~~l~~~l~~~g~~~~~~~~-~--------~Vvvg-~~~~-~~~~~l~~a~~~l-~~g~~-~i~~n~D 144 (248)
T PRK10444 81 E---GKKAYVIGEGALIHELYKAGFTITDINP-D--------FVIVG-ETRS-YNWDMMHKAAYFV-ANGAR-FIATNPD 144 (248)
T ss_pred C---CCEEEEEcCHHHHHHHHHCcCEecCCCC-C--------EEEEe-CCCC-CCHHHHHHHHHHH-HCCCE-EEEECCC
Confidence 1 1223333222 11110 0000 0 01111 1100 1122333334444 35655 5677544
Q ss_pred chHHHHHHHhhcCCc-------cccc---c--ceeecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEE
Q psy8912 450 EMLRAHQLVDLFNWN-------QHFD---H--KEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCI 516 (538)
Q Consensus 450 ~~~~a~~~L~~lgL~-------~yFd---~--~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i 516 (538)
.. . -|+. ..+. . ......+++..|..++++++++|++|+||||+. .||.+|+++|++++
T Consensus 145 ~~---~-----~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~v 216 (248)
T PRK10444 145 TH---G-----RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI 216 (248)
T ss_pred CC---C-----CCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEE
Confidence 21 0 0111 0111 1 112234567789999999999999999999997 89999999999999
Q ss_pred EECCCCCHHH
Q psy8912 517 HVKDGMSHSV 526 (538)
Q Consensus 517 ~V~dg~t~~~ 526 (538)
+|.+|.+..+
T Consensus 217 lV~~G~~~~~ 226 (248)
T PRK10444 217 LVLSGVSTLD 226 (248)
T ss_pred EECCCCCCHH
Confidence 9999977543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=78.18 Aligned_cols=187 Identities=14% Similarity=0.117 Sum_probs=104.8
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCC-cccccc---cccCc-chhhhhhhhc
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLS-DFFDYK---EIFPA-EKKIKHFANL 375 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~-~~~~~~~~~~ 375 (538)
-|=+|||++ ..+..++.++.|+++||+.++||=-+. ..+..+++.|++. .++.|. -||-. ..++
T Consensus 4 ~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~-~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~------ 76 (221)
T TIGR02463 4 SDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTSKTA-AEVEYLQKALGLTGDPYIAENGAAIHLEELWRE------ 76 (221)
T ss_pred EeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc------
Confidence 467899887 345578999999999999999996555 4468889999997 444431 23321 1000
Q ss_pred ccCcCCCccceEEeecC-------------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceE
Q psy8912 376 KKDSKIKYKDMVFFDDE-------------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 442 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikl 442 (538)
++.-++...-++ +.+.. +..+. .......... ..+.....+ +..+++.++.+
T Consensus 77 -----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~ 141 (221)
T TIGR02463 77 -----EPGYPRIILGISYGIIRLVLETLSEELHFK-FTPFD----DLSDAEIAEL----TGLSGSQAA-LAQDREASVPL 141 (221)
T ss_pred -----CCCceEEecCCCHHHHHHHHHHHHHHhCCC-ceehh----hCCHHHHHHH----hCcCHHHHH-HHHhccCCccE
Confidence 000001111111 00000 00000 0000000000 111111111 22223344444
Q ss_pred EE-EeCCCchHHHHHHHhhcCCc----cccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 443 AA-ASRTTEMLRAHQLVDLFNWN----QHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 443 aI-ASss~~~~~a~~~L~~lgL~----~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.+ .+... .+.+...++..++. .+|. ++.+. +|......+++.+|+++++|++|||+.||+...+.+|..+
T Consensus 142 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~--ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 142 LWRDSDSR-MPRFTALLADLGLAIVQGNRFS--HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred EecCchhH-HHHHHHHHHHcCCeEEecCCee--EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 44 33332 33455677777776 5554 45443 6888899999999999999999999999999999999665
Q ss_pred E
Q psy8912 516 I 516 (538)
Q Consensus 516 i 516 (538)
+
T Consensus 219 a 219 (221)
T TIGR02463 219 V 219 (221)
T ss_pred E
Confidence 3
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.8e-05 Score=79.20 Aligned_cols=47 Identities=11% Similarity=-0.019 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+|...++.+++.+|+++++|++|||+.+|+.+.+.+|..+++|.++.
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 46677899999999999999999999999999999888888887643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.4e-06 Score=82.82 Aligned_cols=198 Identities=16% Similarity=0.130 Sum_probs=112.2
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCc-chhhhhhhhc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPA-EKKIKHFANL 375 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 375 (538)
+-|=+|||++ +++.+.+.++.|+++|+++++||-.+. .-+..++..+++.++|++. .||-. ..+. -.+
T Consensus 8 ~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~-~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~---~~~ 83 (273)
T PRK00192 8 FTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTA-AEVEVLRKELGLEDPFIVENGAAIYIPKNYFP---FQP 83 (273)
T ss_pred EEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCEEEEcCcEEEecccccc---cCC
Confidence 4678899986 677789999999999999999986654 4467789999998777653 34321 1000 001
Q ss_pred ccCcCCCccceEEeecC-------------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceE
Q psy8912 376 KKDSKIKYKDMVFFDDE-------------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 442 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikl 442 (538)
+..-.....++.-.-++ +.+. ++.... ......+... .. .| .+.++.++.+++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~-~~~~~~~~~~----~~-~~--~~~~~~~~~~~~~~ 151 (273)
T PRK00192 84 DGERLKGDYWVIELGPPYEELREILDEISDELGY----PLKGFG-DLSAEEVAEL----TG-LS--GESARLAKDREFSE 151 (273)
T ss_pred ccccccCCceEEEcCCCHHHHHHHHHHHHHHhCC----Ceeehh-hCCHHHHHHH----hC-cC--HHHHHHHHhcccCC
Confidence 10000011122222222 0010 000000 0000001110 01 12 12234455666665
Q ss_pred EEE---eCCCchHHHHHHHhhcCCc----cccccceeecC-CchHHHHHHHHHhCCCC-CcEEEEecccccHHhHcccCC
Q psy8912 443 AAA---SRTTEMLRAHQLVDLFNWN----QHFDHKEIFPG-QKTTHFANLKKATGIEY-KDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 443 aIA---Sss~~~~~a~~~L~~lgL~----~yFd~~~i~~~-~k~~~~~kal~~lgi~p-ee~l~~eDs~~~I~aAk~aGi 513 (538)
.++ +... .+.+...++.+++. .+|. ++.+. +|...+..+++.+|+++ +++++|||+.+|+..++.+|.
T Consensus 152 ~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~--ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~ 228 (273)
T PRK00192 152 PFLWNGSEAA-KERFEEALKRLGLKVTRGGRFL--HLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADI 228 (273)
T ss_pred ceeecCchHH-HHHHHHHHHHcCCEEEECCeEE--EEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCe
Confidence 554 3322 23455667777765 4444 34333 66667889999999999 999999999999999999985
Q ss_pred EEEEECCC
Q psy8912 514 TCIHVKDG 521 (538)
Q Consensus 514 ~~i~V~dg 521 (538)
.+ ++.++
T Consensus 229 ~v-am~NA 235 (273)
T PRK00192 229 AV-VVPGP 235 (273)
T ss_pred eE-EeCCC
Confidence 44 44443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.4e-06 Score=78.35 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
|+..++.++++++++++++++|||+.+|+.+++.+|+..
T Consensus 164 K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~v 202 (204)
T TIGR01484 164 KGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAV 202 (204)
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence 556789999999999999999999999999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.6e-05 Score=80.99 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=63.5
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCch--HHHHHHHhhcCCccccccceee---cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFNWNQHFDHKEIF---PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~~a~~~L~~lgL~~yFd~~~i~---~~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++++|++... +.+...|+.+|+..++....+. ...|......+.+..++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 35779999999999999999999999987633 2345778999997655321222 13567777777665555
Q ss_pred EEEEecccccHHhH
Q psy8912 495 MVFFDDEERNSHDV 508 (538)
Q Consensus 495 ~l~~eDs~~~I~aA 508 (538)
+++|||...|+.++
T Consensus 191 vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 VLLFGDNLLDFDDF 204 (266)
T ss_pred EEEECCCHHHhhhh
Confidence 89999999998664
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.3e-06 Score=70.16 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=47.9
Q ss_pred CCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 475 GQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 475 ~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
.+.+..|..++++++++|++|++|||+ ..||.+|+++|+.+|+|.+|....+.
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~ 57 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPED 57 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCG
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHH
Confidence 356777999999999999999999999 99999999999999999999876543
|
... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.5e-05 Score=87.68 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=45.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 113 FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 113 f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
+..+++.+|++++++++|||+.+|+.+-+.+|. .|++.++. ... +. .+++|..+ ..+.+...+.
T Consensus 512 Lk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~-gVAMgNA~--eeV-K~----~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 512 VKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL-GVALSNGA--EKT-KA----VADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC-EEEeCCCC--HHH-HH----hCCEEeCCCCcCHHHHHHH
Confidence 556678889999999999999999999999998 46666543 222 22 35777644 4455544444
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.9e-06 Score=81.94 Aligned_cols=123 Identities=15% Similarity=0.109 Sum_probs=77.5
Q ss_pred CCceEEEeCCCCCChhhHh--hhh---chhHH-HHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVH--DLV---APFKK-IGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHA 86 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~--~~i---~~~~~-~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~ 86 (538)
.+.+|+||+|+|+...... ... .++.. .+...+. .....+.||+.++++.++++|+.|+++||.+.. ...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~--~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVA--SGKAPAIPGALELYNYARSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHH--CTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHh--cccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHH
Confidence 3679999999998543211 111 11111 1222222 223489999999999999999999999997652 456
Q ss_pred HHHHHHcCCCCCCcce--eecC-CC------CHHHHHHHHHH-cCCCCCcEEEEeCCcccHHHHhhc
Q psy8912 87 KQILNLINLNQYFSNK--EIYP-GQ------KTTHFESLKKA-TGIEYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~i--e~~~-~~------Kp~~f~~ale~-lgi~P~e~L~IGDs~~DI~aAk~a 143 (538)
...|.+.|....-..+ .... .. |......+.++ +.+ +++|||...|+..++..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHH
T ss_pred HHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE----EEEeCCCHHHhhccccc
Confidence 6678888864322221 1111 11 44555666565 455 78899999999885443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.8e-06 Score=83.84 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=54.1
Q ss_pred CCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccC-CCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q psy8912 380 KIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYY-RDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 458 (538)
Q Consensus 380 ~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~-pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L 458 (538)
-.+.|.++|||||-==+ .+ ...+.+. ||+.++|++|+++|+++||+||+.++ .+...|
T Consensus 122 ~~~~~kvIvFDLDgTLi------------------~~--~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re-~v~~~L 180 (301)
T TIGR01684 122 VFEPPHVVVFDLDSTLI------------------TD--EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRD-HVVESM 180 (301)
T ss_pred ccccceEEEEecCCCCc------------------CC--CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHH
Confidence 34667899999992111 00 1124455 89999999999999999999999865 778899
Q ss_pred hhcCCcccccc
Q psy8912 459 DLFNWNQHFDH 469 (538)
Q Consensus 459 ~~lgL~~yFd~ 469 (538)
+.+||.+||+.
T Consensus 181 ~~lGLd~YFdv 191 (301)
T TIGR01684 181 RKVKLDRYFDI 191 (301)
T ss_pred HHcCCCcccCE
Confidence 99999999983
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.3e-06 Score=96.46 Aligned_cols=86 Identities=12% Similarity=0.090 Sum_probs=73.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
.-.++||+.+.|++|+++|++++++|+.+. ..++.+++++|+.++|.. ..+.+ -.+++++++..++++++|||
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~~--~~p~~----K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIAG--VLPDG----KAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEeC--CCHHH----HHHHHHHHhhcCCEEEEEeC
Confidence 456899999999999999999999998875 488999999999988873 22223 34567778888999999999
Q ss_pred ccccHHhHcccCC
Q psy8912 501 EERNSHDVSPLGV 513 (538)
Q Consensus 501 s~~~I~aAk~aGi 513 (538)
+.+|+.++++||+
T Consensus 721 g~nD~~al~~Agv 733 (834)
T PRK10671 721 GINDAPALAQADV 733 (834)
T ss_pred CHHHHHHHHhCCe
Confidence 9999999999999
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.8e-05 Score=84.94 Aligned_cols=124 Identities=22% Similarity=0.242 Sum_probs=93.5
Q ss_pred CCCceEEEeCCCCCChhhHhhhh-chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
..-|++++|+|||||.--+.... .++ --.......+|-...+++..|+++|+-++|+|-+.. ..+..+..+
T Consensus 220 ~~kK~LVLDLDNTLWGGVIGedGv~GI-------~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~-~da~evF~k 291 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVIGEDGVDGI-------RLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTE-KDAKEVFRK 291 (574)
T ss_pred cccceEEEecCCcccccccccccccce-------eecCCCCchhHHHHHHHHHHHHhccEEEEEecCCch-hhHHHHHhh
Confidence 34689999999999963221111 000 000122345566678999999999999999999978 888888877
Q ss_pred cCC----CCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 93 INL----NQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 93 lgL----~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
+.- .+.|+...+...+|.+-++++++++|+..+..+|++|++...+-.++.+-
T Consensus 292 hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 292 HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 751 24566667777889999999999999999999999999998888887665
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.2e-05 Score=92.02 Aligned_cols=114 Identities=8% Similarity=-0.000 Sum_probs=85.3
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.++||+.+.|+.|+++|++++++|+.+. ..++.+++.+|+.++|... .|+.-..++++++..+++++||||+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~~~------~p~~K~~~i~~l~~~~~~v~~vGDg~ 722 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIAGV------LPDGKAEAIKRLQSQGRQVAMVGDGI 722 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEeCC------CHHHHHHHHHHHhhcCCEEEEEeCCH
Confidence 5679999999999999999999999988 8999999999998777652 24334456677777889999999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhh
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDI 183 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i 183 (538)
+|+.+++++|+ . +.+|.......+ .+|.+..+ +...+...+
T Consensus 723 nD~~al~~Agv-g--ia~g~g~~~a~~-----~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 723 NDAPALAQADV-G--IAMGGGSDVAIE-----TAAITLMRHSLMGVADAL 764 (834)
T ss_pred HHHHHHHhCCe-e--EEecCCCHHHHH-----hCCEEEecCCHHHHHHHH
Confidence 99999999999 3 444444333322 35666654 333444333
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.5e-05 Score=87.59 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCch-HHHHHHHHHhCCCCCcEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQKT-THFANLKKATGIEYKDMV 496 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k~-~~~~kal~~lgi~pee~l 496 (538)
.++++||+.++|++++++|++++++|++++. .++.+++++|+ ||...... ..++ .....+.+.++ .++++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~-~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~ 143 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDER-LAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFD 143 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCee
Confidence 3567899999999999999999999999864 89999999998 66321111 1221 12344445565 46699
Q ss_pred EEecccccHHhHcccCCEEEEECCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|+||+.+|+..++.+| +.+.|..+
T Consensus 144 yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 144 YAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred EecCCHHHHHHHHhCC-CeEEECCC
Confidence 9999999999999999 77777654
|
|
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=4e-05 Score=75.12 Aligned_cols=107 Identities=12% Similarity=0.164 Sum_probs=76.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCc-eEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecC---------------------CC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYP---------------------GQ 108 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~Gi-kiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~---------------------~~ 108 (538)
...+...||+.++++.+++.|. -+.|+|.++. -..+.+|+++|+.+.|+.|-..| .+
T Consensus 80 ~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNs-fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 80 LRSIPIVPGMVRLIKSAAKLGCFELIIVSDANS-FFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred HhcCCCCccHHHHHHHHHhCCCceEEEEecCch-hHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 5567788999999999999986 9999999988 99999999999988887651100 01
Q ss_pred CHH-----H---HHHHHHHcCCCCCcEEEEeCCcccHHHHhh-cCCeEEEECCCCCchH
Q psy8912 109 KTT-----H---FESLKKATGIEYKDMVFFDDEERNSHDVSP-LGVTCIHSWLMMSSGR 158 (538)
Q Consensus 109 Kp~-----~---f~~ale~lgi~P~e~L~IGDs~~DI~aAk~-aG~~tI~V~~G~~~~~ 158 (538)
++. . |..-.-+-|+..++.+|+||+.+|+=+... .+...+....|+....
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWK 217 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHh
Confidence 221 1 222223457888999999999999655544 4555555556665433
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.3e-05 Score=76.37 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=78.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH----hhcCCccc----cccceeecCCchHHHHHHHHHhCCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV----DLFNWNQH----FDHKEIFPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L----~~lgL~~y----Fd~~~i~~~~k~~~~~kal~~lgi~p 492 (538)
..++||++.+.|+..|++|+++.|-||.+.+ |++++ ...+|.+| ||. .++...+..-|.++++..|++|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~--AQkL~Fghs~agdL~~lfsGyfDt-tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVK--AQKLFFGHSDAGDLNSLFSGYFDT-TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCch--hHHHhhcccccccHHhhhcceeec-cccccccchhHHHHHHhcCCCc
Confidence 3579999999999999999999999998764 56554 22234444 443 4444456667999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
.|++|.-|...-+.||+.+|+.++.+-.
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R 205 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVR 205 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeec
Confidence 9999999999999999999999988744
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.00 E-value=9.5e-06 Score=76.32 Aligned_cols=120 Identities=18% Similarity=0.097 Sum_probs=77.0
Q ss_pred CceEEEeCCCCCChhhHhhhh-chhH--------HHHHHH----HhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLV-APFK--------KIGQKV----MDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i-~~~~--------~~~~~i----~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
-..+++|+|.||+.+...... .... +..... .......+.++||+.++|+.|++. +.++|+|++.+
T Consensus 6 kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~ 84 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTR 84 (156)
T ss_pred ceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcH
Confidence 467999999999654422211 0000 000000 011234567899999999999966 99999999999
Q ss_pred HHHHHHHHHHcCCC-CCC-cceeecCCCCHHHHHHHH-HHcCCCCCcEEEEeCCcccHH
Q psy8912 83 ILHAKQILNLINLN-QYF-SNKEIYPGQKTTHFESLK-KATGIEYKDMVFFDDEERNSH 138 (538)
Q Consensus 83 p~~~~~~L~~lgL~-~~F-d~ie~~~~~Kp~~f~~al-e~lgi~P~e~L~IGDs~~DI~ 138 (538)
..+..+++.++.. .+| +.+-...... ..+.+-+ .-++.+.+.+++|+|++.-..
T Consensus 85 -~yA~~vl~~ldp~~~~F~~ri~~rd~~~-~~~~KdL~~i~~~d~~~vvivDd~~~~~~ 141 (156)
T TIGR02250 85 -AYAQAIAKLIDPDGKYFGDRIISRDESG-SPHTKSLLRLFPADESMVVIIDDREDVWP 141 (156)
T ss_pred -HHHHHHHHHhCcCCCeeccEEEEeccCC-CCccccHHHHcCCCcccEEEEeCCHHHhh
Confidence 9999999999988 488 4331111111 1222223 445788899999999985433
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=97.97 E-value=6.2e-05 Score=73.49 Aligned_cols=178 Identities=20% Similarity=0.169 Sum_probs=102.8
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCcchhhhhhhhccc
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPAEKKIKHFANLKK 377 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 377 (538)
-|=+|||.+ +.|...+.+++|+++||..++||-.+... +..++..|++..++.+. .|+........|+.
T Consensus 3 ~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~--- 78 (225)
T TIGR01482 3 SDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSVQF-ARALAKLIGTPDPVIAENGGEISYNEGMDDIFLA--- 78 (225)
T ss_pred EeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCchHH-HHHHHHHhCCCCeEEEecCcEEEeCCCCceEEec---
Confidence 466788874 55667778899999999999999765544 45688999977665441 33332110111100
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
-+++ .|.. ..+. .. ..+...+...+..+.....+.++.. ++.+..+
T Consensus 79 ------------~~~~-------~~~~-------~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 124 (225)
T TIGR01482 79 ------------YLEE-------EWFL-------DIVI-AK------TFPFSRLKVQYPRRASLVKMRYGID-VDTVREI 124 (225)
T ss_pred ------------ccCH-------HHHH-------HHHH-hc------ccchhhhccccccccceEEEeecCC-HHHHHHH
Confidence 0000 0000 0000 00 0000011111111222334444443 3456677
Q ss_pred HhhcCCcccc----ccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 458 VDLFNWNQHF----DHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 458 L~~lgL~~yF----d~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+++.-.+ .+.++.+. +|...+.++++++|++++++++|||+.||+...+.+|.. ++|.++
T Consensus 125 ~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na 193 (225)
T TIGR01482 125 IKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANA 193 (225)
T ss_pred HHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCCh
Confidence 7777753111 12234433 688889999999999999999999999999999999985 566663
|
catalyze the same reaction as SPP. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.6e-05 Score=81.62 Aligned_cols=74 Identities=18% Similarity=0.181 Sum_probs=56.5
Q ss_pred cccCcCC-CccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccC-CCHHHHHHHHHHCCceEEEEeCCCchH
Q psy8912 375 LKKDSKI-KYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYY-RDVPAILKYLKQNNCLVAAASRTTEML 452 (538)
Q Consensus 375 ~~~~~~~-~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~-pGv~e~L~~Lk~~GiklaIASss~~~~ 452 (538)
++..+-. +.|.++|||+|.-=+ .. ...+.+. ||+.++|++|+++|+++||+||++++
T Consensus 118 ~~~~~~~~~~~~~i~~D~D~TL~-------------------~~-~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re- 176 (303)
T PHA03398 118 LKSESLVWEIPHVIVFDLDSTLI-------------------TD-EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNRE- 176 (303)
T ss_pred hccceeEeeeccEEEEecCCCcc-------------------CC-CCccccCChhHHHHHHHHHHCCCEEEEEcCCChH-
Confidence 3444433 778999999992111 00 1134455 89999999999999999999998765
Q ss_pred HHHHHHhhcCCcccccc
Q psy8912 453 RAHQLVDLFNWNQHFDH 469 (538)
Q Consensus 453 ~a~~~L~~lgL~~yFd~ 469 (538)
.+...|+.+||.+||+.
T Consensus 177 ~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 177 HVVHSLKETKLEGYFDI 193 (303)
T ss_pred HHHHHHHHcCCCccccE
Confidence 77889999999999983
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.7e-05 Score=76.68 Aligned_cols=128 Identities=13% Similarity=-0.060 Sum_probs=79.7
Q ss_pred CceEEEeCCCCCChhh--Hhhhh---chhHHH-HHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHH---H
Q psy8912 16 PKMVVFDLDYTLWPLH--VHDLV---APFKKI-GQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---A 86 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~--~~~~i---~~~~~~-~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~---~ 86 (538)
..+||||+|.|+.... ..... .++... +...+. .....+.|++.++++.|+++|++++++|+.+. .. .
T Consensus 77 ~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~--~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e-~~r~~T 153 (229)
T TIGR01675 77 MDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLG--KGAAPALPEGLKLYQKIIELGIKIFLLSGRWE-ELRNAT 153 (229)
T ss_pred CcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHH--cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCh-HHHHHH
Confidence 5799999999995433 11111 222221 222221 44568999999999999999999999999976 44 6
Q ss_pred HHHHHHcCCCCCCcceee---cCCC------CHHHHHHHHH-HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 87 KQILNLINLNQYFSNKEI---YPGQ------KTTHFESLKK-ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~ie~---~~~~------Kp~~f~~ale-~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
...|...|+..+ +..-. .... |.+....+.+ .+.| +..|||..+|+..+ .+|.+++-+++
T Consensus 154 ~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI----v~~iGDq~sDl~G~-~~~~RtFKLPN 223 (229)
T TIGR01675 154 LDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI----WGNIGDQWSDLLGS-PPGRRTFKLPN 223 (229)
T ss_pred HHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceE----EEEECCChHHhcCC-CccCceeeCCC
Confidence 677888887654 33211 1112 2233333332 1333 56799999998554 56667665544
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.9e-05 Score=73.18 Aligned_cols=176 Identities=18% Similarity=0.135 Sum_probs=106.2
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccCcchhhhhhhhcc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFPAEKKIKHFANLK 376 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 376 (538)
+-|=+|||.+ +-|...+.+++|+++|+..++||-.+.. .+..+++.|++...+++ ..||-...++ .+ .
T Consensus 5 ~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~-~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~-~~---~ 79 (215)
T TIGR01487 5 AIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVP-FARALAVLIGTSGPVVAENGGVIFYNKEDI-FL---A 79 (215)
T ss_pred EEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcch-hHHHHHHHhCCCCcEEEccCcEEEeCCCcE-EE---e
Confidence 3477888884 5577888999999999999999866544 46778999999866664 3444322111 00 0
Q ss_pred cCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 377 KDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
. ....+++.. + ..+. ........ ... +...+.+.++.. .+.++.
T Consensus 80 ~---~~~~~~~~~---~------~~~~---------~~~~~~~~-------------~~~-~~~~~~~~~~~~-~~~~~~ 123 (215)
T TIGR01487 80 N---MEEEWFLDE---E------KKKR---------FPRDRLSN-------------EYP-RASLVIMREGKD-VDEVRE 123 (215)
T ss_pred c---ccchhhHHH---h------hhhh---------hhhhhccc-------------ccc-eeEEEEecCCcc-HHHHHH
Confidence 0 000000000 0 0000 00000000 000 123344555544 346677
Q ss_pred HHhhcCCccccc--cceeec--CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 457 LVDLFNWNQHFD--HKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 457 ~L~~lgL~~yFd--~~~i~~--~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.++..++..++. ..++.+ .+|...+..+++.+|++++++++|||+.+|++..+.+|..+ ++.++
T Consensus 124 ~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~v-am~na 191 (215)
T TIGR01487 124 IIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKV-AVANA 191 (215)
T ss_pred HHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeE-EcCCc
Confidence 788777765532 123333 27888899999999999999999999999999999999764 44443
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.7e-05 Score=73.89 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=89.1
Q ss_pred CCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccC---CCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 380 KIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYY---RDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 380 ~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~---pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
+++.-.|++||.| |........++..|++++-| +|. -++.|.+.|+++||.|..+.+ .++.
T Consensus 4 ra~~IkLli~DVD-------------GvLTDG~ly~~~~Gee~KaFnv~DG~--Gik~l~~~Gi~vAIITGr~s~-ive~ 67 (170)
T COG1778 4 RAKNIKLLILDVD-------------GVLTDGKLYYDENGEEIKAFNVRDGH--GIKLLLKSGIKVAIITGRDSP-IVEK 67 (170)
T ss_pred hhhhceEEEEecc-------------ceeecCeEEEcCCCceeeeeeccCcH--HHHHHHHcCCeEEEEeCCCCH-HHHH
Confidence 3455679999999 11112223344445444433 332 256677889999999998876 8888
Q ss_pred HHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 457 LVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 457 ~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
-.+.+|+..+|. +..+|...|..+++++++.|++|.|+||-.+|+-.-++.|..+.
T Consensus 68 Ra~~LGI~~~~q----G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 68 RAKDLGIKHLYQ----GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred HHHHcCCceeee----chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 999999998887 45578888999999999999999999999999999998888763
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.2e-05 Score=88.22 Aligned_cols=113 Identities=15% Similarity=0.112 Sum_probs=85.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---------------------eecCCCCHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------------------EIYPGQKTTHF 113 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---------------------e~~~~~Kp~~f 113 (538)
++.||+.++++.|+++|+++.++|+... ..+..+.+.+|+...++.+ .++.+..|+.-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~-~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQ-ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 6789999999999999999999999988 9999999999997655432 24455567555
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
..+.+.++-..+.+.|+||+.+|+.|.++|++ ++..|....+. ....+|+++.++
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~v----a~~aaDivl~dd 661 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDV----AKEAADMILTDD 661 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCCCcCHH----HHHhcCEEEcCC
Confidence 55555555556889999999999999999996 35455322221 123578888664
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.9e-05 Score=70.28 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=76.3
Q ss_pred CccCCCHHHHHHHHHHCCce--EEEEeCCC------chHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCC---
Q psy8912 422 IKYYRDVPAILKYLKQNNCL--VAAASRTT------EMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGI--- 490 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~Gik--laIASss~------~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi--- 490 (538)
-.+.|.+.+.+++|++.+.. +.|+|+|. ....++.+-+.+|+. +| .....||.-+.++++.++.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl----~h~~kKP~~~~~i~~~~~~~~~ 132 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VL----RHRAKKPGCFREILKYFKCQKV 132 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EE----EeCCCCCccHHHHHHHHhhccC
Confidence 44678899999999998775 99999883 345777777888853 21 2344677667777777654
Q ss_pred --CCCcEEEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 491 --EYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 491 --~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
.|+|+++|||+. .|+..|...|+.+|.|++|.+
T Consensus 133 ~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv~ 168 (168)
T PF09419_consen 133 VTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGVT 168 (168)
T ss_pred CCCchhEEEEcchHHHHHHHhhccCceEEEEecCcC
Confidence 599999999995 699999999999999999864
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.86 E-value=8e-05 Score=73.85 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
+|+..++.+++++|+++++|++|||+.+|+.+.+.+|.. +.+.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~-iav~n 202 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG-VVVGN 202 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE-EEEcC
Confidence 577889999999999999999999999999999998864 45654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.4e-05 Score=78.37 Aligned_cols=63 Identities=22% Similarity=0.216 Sum_probs=52.9
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
|+|+|++|+||||.+. .-.+.+.+.++|+.|+++|++++++|+++. ..+...++.++
T Consensus 3 ~~kli~~DlDGTLl~~----------------------~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~-~~~~~~~~~l~ 59 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH----------------------HTYSYEPAKPALKALKEKGIPVIPCTSKTA-AEVEVLRKELG 59 (273)
T ss_pred cceEEEEcCcccCcCC----------------------CCcCcHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcC
Confidence 5899999999999861 234667899999999999999999999988 88888899888
Q ss_pred CCCCCc
Q psy8912 95 LNQYFS 100 (538)
Q Consensus 95 L~~~Fd 100 (538)
+..+|-
T Consensus 60 l~~~~i 65 (273)
T PRK00192 60 LEDPFI 65 (273)
T ss_pred CCCCEE
Confidence 765443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00016 Score=67.95 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=69.7
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHH---HHHHHH--
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA---KQILNL-- 92 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~---~~~L~~-- 92 (538)
+|+||+||||........+ .. ....-...|++.+++++|+++|+++.++|+.+. ... +..+..
T Consensus 1 iVisDIDGTL~~sd~~~~~----------~~-~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~-~~~~~t~~~l~~~~ 68 (157)
T smart00775 1 IVISDIDGTITKSDVLGHV----------VP-IIGKDWTHPGVAKLYRDIQNNGYKILYLTARPI-GQADRTRSYLSQIK 68 (157)
T ss_pred CEEEecCCCCccccccccc----------cc-ccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcH-HHHHHHHHHHHHhh
Confidence 4899999999763311111 00 011135679999999999999999999999976 444 356655
Q ss_pred ---cCCCC-C-Ccce-eec-------CCCCH-----HHHHHHHHHcCCCCCcE-EEEeCCcccHHHHhhcCCe
Q psy8912 93 ---INLNQ-Y-FSNK-EIY-------PGQKT-----THFESLKKATGIEYKDM-VFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 93 ---lgL~~-~-Fd~i-e~~-------~~~Kp-----~~f~~ale~lgi~P~e~-L~IGDs~~DI~aAk~aG~~ 146 (538)
.++.. . +-.- ... -..+| +....+.+.+.-.-... +.+||+.+|+.+-+++|+.
T Consensus 69 ~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 69 QDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred hccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 23321 1 1000 000 01223 33444444433212233 3488889999999999996
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.67 E-value=1.8e-05 Score=73.76 Aligned_cols=125 Identities=21% Similarity=0.203 Sum_probs=73.2
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC-
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL- 95 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL- 95 (538)
|+++||+||||+........+ .............+.+.||+.++|+.|.+. +.++|.|++.. .+++.+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~---~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~-~ya~~v~~~ldp~ 75 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLP---YDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASE-EYAEPVLDALDPN 75 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT----SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-H-HHHHHHHHHHTTT
T ss_pred CEEEEeCCCcEEEEeecCCCC---cccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehh-hhhhHHHHhhhhh
Confidence 689999999996533211000 000000001123466789999999999665 99999999988 999999999986
Q ss_pred CCCCcceeecCCCC--HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 96 NQYFSNKEIYPGQK--TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 96 ~~~Fd~ie~~~~~K--p~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
..+|+.+-...... ...+.+-++.+|-+++++++|+|++.-...-...++.
T Consensus 76 ~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~ 128 (159)
T PF03031_consen 76 GKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIP 128 (159)
T ss_dssp TSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE
T ss_pred ccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEE
Confidence 46777652111110 0111255666777889999999998754333444444
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=76.00 Aligned_cols=163 Identities=21% Similarity=0.247 Sum_probs=115.4
Q ss_pred ccccccchhhhHHhhhCCCcccccccccCcch----hhhhhhh-----cccCcCCCccceEEeecCCCCcCCCCCCc---
Q psy8912 336 SRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEK----KIKHFAN-----LKKDSKIKYKDMVFFDDEERNARSISKLG--- 403 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~l~~~Dldh~~~s~~~p~~--- 403 (538)
+|--.+|-+ .|++.+|...+|++++.++++. |.-|-.. |-..-+=+-+..+|+|||. ..|+
T Consensus 166 ~r~~~fD~~-~l~srig~~~~~d~k~~~~a~~~~n~e~~~l~~~ei~Sl~~A~~g~~kK~LVLDLDN------TLWGGVI 238 (574)
T COG3882 166 GRWLMFDQE-ALASRIGIERWFDPKAYHSASVPFNVELCPLAADEIASLLAAMSGKSKKALVLDLDN------TLWGGVI 238 (574)
T ss_pred cceeeccHH-HHHhHhhhhhhcchHHHHhccCCcchhhhhHhhHHHHHHHHHhhCcccceEEEecCC------ccccccc
Confidence 455566654 6889999999999999999853 3344322 2222334567799999992 0122
Q ss_pred ----ccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC----ccccccceeecC
Q psy8912 404 ----VIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW----NQHFDHKEIFPG 475 (538)
Q Consensus 404 ----~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL----~~yFd~~~i~~~ 475 (538)
+=|++..+ + .+=.+|....+++..|+++|+-|||||-++ ...|..+.++.-= .+.|+...+...
T Consensus 239 GedGv~GI~Ls~------~-~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~-~~da~evF~khp~MiLkeedfa~~~iNW~ 310 (574)
T COG3882 239 GEDGVDGIRLSN------S-AEGEAFKTFQNFIKGLKKQGVLLAVCSKNT-EKDAKEVFRKHPDMILKEEDFAVFQINWD 310 (574)
T ss_pred ccccccceeecC------C-CCchhHHHHHHHHHHHHhccEEEEEecCCc-hhhHHHHHhhCCCeEeeHhhhhhheecCC
Confidence 11111111 1 122356667889999999999999999775 4467766654321 246666677777
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
+|++.+++++++|++--+.++|+||.+...+-.++.+-
T Consensus 311 ~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 311 PKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred cchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999775
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00037 Score=70.96 Aligned_cols=43 Identities=9% Similarity=0.112 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhc---CCeEEEECCC
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHSWLM 153 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~a---G~~tI~V~~G 153 (538)
.....+++.+|+..+++++|||..+|+.+-+.+ |..+|.|..+
T Consensus 177 ~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred HHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 447778889999999999999999998877766 4556777544
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00037 Score=70.14 Aligned_cols=198 Identities=17% Similarity=0.219 Sum_probs=105.0
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc----------ccccCcchhh
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY----------KEIFPAEKKI 369 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 369 (538)
+-|=+|||++ +=+..+..+++|+++|++.++|+-.+. ..++.+++.|++..++++ +.+|...---
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~ 85 (264)
T COG0561 7 AFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPL-PDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSR 85 (264)
T ss_pred EEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCH
Confidence 4567788765 556778889999999999999998887 889999999999986654 3333332222
Q ss_pred hhhhhcccCcCCC-ccceEEeecC----CCCcC--CCCCCcccccccccchHhhhcCCCCcc----CCCHHHHHHHHHHC
Q psy8912 370 KHFANLKKDSKIK-YKDMVFFDDE----ERNAR--SISKLGVIGIQVHRDKVLDAGGAIIKY----YRDVPAILKYLKQN 438 (538)
Q Consensus 370 ~~~~~~~~~~~~~-~~~l~~~Dld----h~~~s--~~~p~~~i~i~~~~~~i~d~~~~~v~l----~pGv~e~L~~Lk~~ 438 (538)
++.+.|-.-.+-. --.+..+..| .++.. ....+.............+........ .+-..+..+.++++
T Consensus 86 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 165 (264)
T COG0561 86 EDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKR 165 (264)
T ss_pred HHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhh
Confidence 3333333222111 1122333333 11111 000011000000000000000000000 11122222233332
Q ss_pred Cc--eEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCE
Q psy8912 439 NC--LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 439 Gi--klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
-- ...+.||. + + ..++.+. +|..-...+++++|+++++++.|||+.||++--+.+|..
T Consensus 166 ~~~~~~~~~~s~--~--------------~--~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 166 FPDLGLTVSSSG--P--------------I--SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLG 227 (264)
T ss_pred ccccceEEEEcC--C--------------c--eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCee
Confidence 11 11111111 1 0 0234443 688889999999999999999999999999999988765
Q ss_pred EEEECCC
Q psy8912 515 CIHVKDG 521 (538)
Q Consensus 515 ~i~V~dg 521 (538)
+ ++.++
T Consensus 228 v-am~Na 233 (264)
T COG0561 228 V-AMGNA 233 (264)
T ss_pred e-eccCC
Confidence 5 44443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0012 Score=71.62 Aligned_cols=80 Identities=14% Similarity=0.044 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHc---CCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh---hCCCCCCEEEeC--Cchhh
Q psy8912 108 QKTTHFESLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA---TGIDYKDMIYFD--DEQEH 179 (538)
Q Consensus 108 ~Kp~~f~~ale~l---gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~---l~~~~~d~Ii~d--~~~~~ 179 (538)
.|-.....+++++ |++++++++|||+.+|+.+-+.+|...|.+.++. .+..+. .....++++... ....+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~--~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ--EELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc--HHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 4667788999998 9999999999999999999999997778886643 222221 123344666433 46677
Q ss_pred HHhhhhcCCc
Q psy8912 180 VNDISKLGVT 189 (538)
Q Consensus 180 ~~~i~~~g~~ 189 (538)
.+.+.+.++.
T Consensus 253 ~~al~~f~l~ 262 (413)
T PLN02382 253 IQAIGHFNLG 262 (413)
T ss_pred HHHHHHhCCC
Confidence 7788887654
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00039 Score=69.66 Aligned_cols=58 Identities=9% Similarity=-0.081 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhc-------CCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~a-------G~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|...+..+++++++.+.+++||||+.+|+.+++.+ |..++.|.+|. ....+++++.+.
T Consensus 168 Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---------~~~~A~~~~~~~ 232 (244)
T TIGR00685 168 KGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---------KKTVAKFHLTGP 232 (244)
T ss_pred HHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---------cCCCceEeCCCH
Confidence 55778999999999999999999999999999988 77788886442 234567766643
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00014 Score=68.84 Aligned_cols=82 Identities=16% Similarity=0.226 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc-cceeec-----------C--C--chHHHHHH---HH
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-HKEIFP-----------G--Q--KTTHFANL---KK 486 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd-~~~i~~-----------~--~--k~~~~~ka---l~ 486 (538)
|++.++|++++++|+++.|+|++.. ..++.+++.+|+...+- +..... + . |+..+.++ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence 5555999999999999999999975 49999999999986432 111111 0 1 66666666 34
Q ss_pred HhCCCCCcEEEEecccccHHhHc
Q psy8912 487 ATGIEYKDMVFFDDEERNSHDVS 509 (538)
Q Consensus 487 ~lgi~pee~l~~eDs~~~I~aAk 509 (538)
+ +..+..+++|||+.+|+..+|
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 4 889999999999999998764
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00055 Score=67.10 Aligned_cols=176 Identities=19% Similarity=0.164 Sum_probs=98.3
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCc-chhhhhhhhc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPA-EKKIKHFANL 375 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 375 (538)
+-|=+|||.+ +-|...+.+.+|+++|++.++||--+... +..++..|++..++.+. .||-. ..++. |+.
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~-~~~- 83 (230)
T PRK01158 7 AIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCF-ARAAAKLIGTSGPVIAENGGVISVGFDGKRI-FLG- 83 (230)
T ss_pred EEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHH-HHHHHHHhCCCCcEEEecCeEEEEcCCCCEE-EEc-
Confidence 4578899885 45677788999999999999998666443 55678899998765442 23311 10110 000
Q ss_pred ccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCC---C-ccCCCHHHHHHHHHHCCceEEEEeCCCch
Q psy8912 376 KKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAI---I-KYYRDVPAILKYLKQNNCLVAAASRTTEM 451 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~---v-~l~pGv~e~L~~Lk~~GiklaIASss~~~ 451 (538)
.++ . . +.++ ..+.+.+... + ...+.. .-..+.+.+... .
T Consensus 84 ----~~~--~-----~----------~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~ 126 (230)
T PRK01158 84 ----DIE--E-----C----------EKAY------SELKKRFPEASTSLTKLDPDY---------RKTEVALRRTVP-V 126 (230)
T ss_pred ----chH--H-----H----------HHHH------HHHHHhccccceeeecCCccc---------ccceeeeccccc-H
Confidence 000 0 0 0000 0000000000 0 000000 001223333332 2
Q ss_pred HHHHHHHhhcCCcc-ccc---cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 452 LRAHQLVDLFNWNQ-HFD---HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 452 ~~a~~~L~~lgL~~-yFd---~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+.+...++.++..- ++. +.++.+. +|...+..+++.+|++++++++|||+.||+...+.+|..+ ++.+
T Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~v-am~N 200 (230)
T PRK01158 127 EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGV-AVAN 200 (230)
T ss_pred HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceE-EecC
Confidence 34556666665321 111 1233333 6888899999999999999999999999999999999865 5554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00043 Score=67.78 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=70.3
Q ss_pred CCccCCCHHHHH-HHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc--cce---eecC-------CchHHHHHHHHH
Q psy8912 421 IIKYYRDVPAIL-KYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD--HKE---IFPG-------QKTTHFANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L-~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd--~~~---i~~~-------~k~~~~~kal~~ 487 (538)
.+.+|||+.++| +.|+++|++++|+|++.+. .++++++.+|+..-.. +.. .+++ ...+...++.+.
T Consensus 93 ~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~-~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~ 171 (211)
T PRK11590 93 NVTAFPVVQERLTTYLLSSDADVWLITGSPQP-LVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERK 171 (211)
T ss_pred hCcCCccHHHHHHHHHHhCCCEEEEEeCCcHH-HHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHH
Confidence 367899999999 6789999999999999865 8899999999622111 101 1111 123334445455
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.+...+.+.+||.+|+.--..+|-.++--|+
T Consensus 172 ~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 172 IGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 677888899999999999888888776654443
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00027 Score=83.50 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=78.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc---------------------eeecCCchH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------------------EIFPGQKTT 479 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~---------------------~i~~~~k~~ 479 (538)
+-+++||+.+.++.|++.|+++.++|..+ +..|..+.+.+||..+++.. .++.+..|+
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDS-QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 44789999999999999999999999876 55999999999998776521 234444555
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
.-..+++.++-..+.+.++||..||+.|.++|++ +|.+|.
T Consensus 605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~ 644 (884)
T TIGR01522 605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQ 644 (884)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCC
Confidence 5566666666667899999999999999999994 555654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00026 Score=70.93 Aligned_cols=181 Identities=13% Similarity=0.076 Sum_probs=102.7
Q ss_pred ccccccccc-------cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcc--ccc---ccccCcchhhhhh
Q psy8912 305 EDAKGTLLN-------LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDF--FDY---KEIFPAEKKIKHF 372 (538)
Q Consensus 305 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~ 372 (538)
-|=+|||++ +-|...+.++.|+++||...+|| +-++...+.++..+++... +.+ .+||-..
T Consensus 6 tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT-GR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~------ 78 (249)
T TIGR01485 6 SDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST-GRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG------ 78 (249)
T ss_pred EcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc-CCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC------
Confidence 467788885 66888999999999999888886 3345577888888887543 333 2333211
Q ss_pred hhcccCcCCCccceEEeecC---CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 373 ANLKKDSKIKYKDMVFFDDE---ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 373 ~~~~~~~~~~~~~l~~~Dld---h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
.. .-|.. +.+ .+|.. .. -..+...+. .+.+-+ .+.++-+++.+.....
T Consensus 79 ------~~-------~~~~~~~~~~~----~~~~~---~~-~~~~~~~~~-~l~~~~-------~~~~~~~k~~~~~~~~ 129 (249)
T TIGR01485 79 ------AE-------VPDQHWAEYLS----EKWQR---DI-VVAITDKFE-ELKPQP-------DLEQRPHKVSFFLDPE 129 (249)
T ss_pred ------CC-------cCCHHHHHHHh----cccCH---HH-HHHHHhcCc-ccccCC-------ccccCCeeEEEEechh
Confidence 00 00000 000 12220 00 000111010 111111 1123446666665332
Q ss_pred c-h---HHHHHHHhhcCCcccc-----ccceeec--CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 450 E-M---LRAHQLVDLFNWNQHF-----DHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 450 ~-~---~~a~~~L~~lgL~~yF-----d~~~i~~--~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
. . ......+..+++.-.+ .+.++.+ .+|...+..+++.+|+++++|++|||+.||+...+.+|..+++|
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~ 209 (249)
T TIGR01485 130 AAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIV 209 (249)
T ss_pred hhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEE
Confidence 1 0 1113334444432100 1123433 27888899999999999999999999999999999988889999
Q ss_pred CCC
Q psy8912 519 KDG 521 (538)
Q Consensus 519 ~dg 521 (538)
.++
T Consensus 210 ~na 212 (249)
T TIGR01485 210 SNA 212 (249)
T ss_pred CCC
Confidence 874
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00018 Score=69.39 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=53.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------HHHHHHHHHc-CCCCCCcceeecCCCCHHHHHHHHHHcCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------LHAKQILNLI-NLNQYFSNKEIYPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------~~~~~~L~~l-gL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~ 123 (538)
-...+|.||+.++|++|.+.|..+.++|+.+.+ ......++++ +. -.++.+ +..+.|. .++.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~-~~~~~K~--------~v~~- 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNL-IFTGDKT--------LVGG- 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCE-EEESSGG--------GC---
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheE-EEecCCC--------eEec-
Confidence 456789999999999999999777777776542 1222333333 21 011222 3334442 1222
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
+ ++|+|++.++..+...|+.++++...++
T Consensus 138 --D-vlIDD~~~n~~~~~~~g~~~iLfd~p~N 166 (191)
T PF06941_consen 138 --D-VLIDDRPHNLEQFANAGIPVILFDQPYN 166 (191)
T ss_dssp --S-EEEESSSHHHSS-SSESSEEEEE--GGG
T ss_pred --c-EEecCChHHHHhccCCCceEEEEcCCCC
Confidence 2 7899999999999999999999976443
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00062 Score=78.92 Aligned_cols=104 Identities=9% Similarity=0.037 Sum_probs=76.5
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.++||+.+.+++|+++|++++++|+.+. ..++.+.+.+|+..++. ..|..|+...+. ++ .+..++||||+.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~~v~~----l~-~~~~v~mvGDgi 638 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVKAVTE----LN-QHAPLAMVGDGI 638 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHHHHHH----Hh-cCCCEEEEECCH
Confidence 6789999999999999999999999988 99999999999964433 234445554443 33 346899999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|..+.+.+++. +..|.......+ .+|.+..+.
T Consensus 639 NDapAl~~A~vg---ia~g~~~~~a~~-----~adivl~~~ 671 (741)
T PRK11033 639 NDAPAMKAASIG---IAMGSGTDVALE-----TADAALTHN 671 (741)
T ss_pred HhHHHHHhCCee---EEecCCCHHHHH-----hCCEEEecC
Confidence 999999999953 333433333222 257776553
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00037 Score=70.96 Aligned_cols=131 Identities=8% Similarity=-0.032 Sum_probs=76.9
Q ss_pred CceEEEeCCCCCChhh--Hhhhh---chhHHH-HH-HHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHH
Q psy8912 16 PKMVVFDLDYTLWPLH--VHDLV---APFKKI-GQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHA 86 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~--~~~~i---~~~~~~-~~-~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~ 86 (538)
-++||||+|+|+.... ..... .++... +. ..+ ......+.|++.++.+.|+++|++|.++||.+.. ...
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv--~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFV--NKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHH--hcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 3799999999995322 11111 222211 12 211 2446678999999999999999999999999752 335
Q ss_pred HHHHHHcCCCCCCcce--e-ecC-CCCH-HHHH-----HHHH-HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 87 KQILNLINLNQYFSNK--E-IYP-GQKT-THFE-----SLKK-ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~i--e-~~~-~~Kp-~~f~-----~ale-~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
...|.+.|+..+ +.. . ... ..+. -.|+ ++.+ .+.| +..|||..+|+......+-++.-+++.
T Consensus 179 ~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrI----v~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 179 EANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGYNI----VGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred HHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCceE----EEEECCCHHhccCCCccCcceecCCCc
Confidence 556677787543 322 0 111 1111 1122 2222 1333 677999999986554323566666543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00022 Score=82.62 Aligned_cols=84 Identities=8% Similarity=0.052 Sum_probs=67.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
+-.++||+.+.+++|+++|+++.++|..+. ..++.+.+.+||..+|. ..+.+|+.. +++++ .++.++||||
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~~----v~~l~-~~~~v~mvGD 636 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVKA----VTELN-QHAPLAMVGD 636 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHHH----HHHHh-cCCCEEEEEC
Confidence 357899999999999999999999998764 58999999999975554 233345553 34444 3468999999
Q ss_pred ccccHHhHcccCC
Q psy8912 501 EERNSHDVSPLGV 513 (538)
Q Consensus 501 s~~~I~aAk~aGi 513 (538)
..||..+.++|++
T Consensus 637 giNDapAl~~A~v 649 (741)
T PRK11033 637 GINDAPAMKAASI 649 (741)
T ss_pred CHHhHHHHHhCCe
Confidence 9999999999993
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00034 Score=76.27 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=69.6
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---------CCCCCCcceeecCCCCHH------------
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPGQKTT------------ 111 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---------gL~~~Fd~ie~~~~~Kp~------------ 111 (538)
.+..-|.+..+|+.||++|.++.++||++- ..+...+..+ .|.++||.| +....||.
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFDvV-Iv~A~KP~FF~~~~pfr~vd 258 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFDVV-IVDARKPGFFTEGRPFREVD 258 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCECEE-EES--CCHHHCT---EEEEE
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhheeEE-EEcCCCCcccCCCCceEEEE
Confidence 345568899999999999999999999988 8998888865 356799976 22222221
Q ss_pred ------------------------HHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhc-CCeEEEECCC
Q psy8912 112 ------------------------HFESLKKATGIEYKDMVFFDDEER-NSHDVSPL-GVTCIHSWLM 153 (538)
Q Consensus 112 ------------------------~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~a-G~~tI~V~~G 153 (538)
......+.+|....+++||||+.. ||..++.. |++|++|..-
T Consensus 259 ~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 259 TETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 156777888999999999999975 88888775 9999999753
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0013 Score=66.68 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=89.9
Q ss_pred ceEEEeCCCCC-----------Chhh-Hhhhh---chhHHHHHHHH-------hhhcCCCccCCCHHHHHHHhhhCCceE
Q psy8912 17 KMVVFDLDYTL-----------WPLH-VHDLV---APFKKIGQKVM-------DAKGTLIKYYRGVPEILRYLKENKCLV 74 (538)
Q Consensus 17 KaVIFDlDGTL-----------w~~~-~~~~i---~~~~~~~~~i~-------~~~~~~~~l~pgv~elL~~Lk~~Giki 74 (538)
-.|+||+|.|| |..+ ...+. +.......+.+ ......-.+-+++.++++.|+++|+++
T Consensus 21 tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~~v 100 (252)
T PF11019_consen 21 TLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGIPV 100 (252)
T ss_pred eEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCCcE
Confidence 47999999999 4444 22221 22222222222 112233345589999999999999999
Q ss_pred EEEcCCCcH--HHHHHHHHHcCCC--CC-Ccc----------------------e-eecCCCCHHHHHHHHHHcCCCCCc
Q psy8912 75 AAASRTSEI--LHAKQILNLINLN--QY-FSN----------------------K-EIYPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 75 aIvTn~~~p--~~~~~~L~~lgL~--~~-Fd~----------------------i-e~~~~~Kp~~f~~ale~lgi~P~e 126 (538)
..+|..+.. .+....|+.+|++ .- |.. + -..+..|..++...+.+.|..|+.
T Consensus 101 ~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~pk~ 180 (252)
T PF11019_consen 101 IALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQSPKK 180 (252)
T ss_pred EEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCCCCe
Confidence 999998642 4455566667763 11 110 0 001224668899999999999999
Q ss_pred EEEEeCCcccHHHH----hhcCCeEEEECCCC
Q psy8912 127 MVFFDDEERNSHDV----SPLGVTCIHSWLMM 154 (538)
Q Consensus 127 ~L~IGDs~~DI~aA----k~aG~~tI~V~~G~ 154 (538)
++||+|+..++... ++.|+..+++.+..
T Consensus 181 IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 181 IIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred EEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 99999998776544 44699988887654
|
The function is not known. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00054 Score=69.45 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=75.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCch--HHHHHHHhhcCCc---------ccc----------------cccee
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFNWN---------QHF----------------DHKEI 472 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~~a~~~L~~lgL~---------~yF----------------d~~~i 472 (538)
.....-+.+.++++.|+++|+++-..|+.... .+...-|+.+||. .+| +++-.
T Consensus 78 ~~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 78 KMELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred ceEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE
Confidence 33445689999999999999997777766532 2455568888874 111 01111
Q ss_pred ec-CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHc----ccCCEEEEECCC
Q psy8912 473 FP-GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS----PLGVTCIHVKDG 521 (538)
Q Consensus 473 ~~-~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk----~aGi~~i~V~dg 521 (538)
.. .+|...+...+.++|..|+.+|||||+..++.+.. +.|+.++++.+.
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 11 16888899999999999999999999999976554 489999999875
|
The function is not known. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00022 Score=70.81 Aligned_cols=55 Identities=20% Similarity=0.118 Sum_probs=44.8
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 96 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~ 96 (538)
+|+||+||||+. .-...|.+.++|++|+++|++++++|+++. ..+...++.+|+.
T Consensus 1 li~~DlDGTLl~-----------------------~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~-~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLP-----------------------PGYEPGPAREALEELKDLGFPIVFVSSKTR-AEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcC-----------------------CCCCchHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCC
Confidence 489999999986 123456799999999999999999999977 6666677777754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00022 Score=74.56 Aligned_cols=70 Identities=9% Similarity=-0.003 Sum_probs=52.9
Q ss_pred cCCCCHHHHHHHHHHc--------CC-----CCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCE
Q psy8912 105 YPGQKTTHFESLKKAT--------GI-----EYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDM 170 (538)
Q Consensus 105 ~~~~Kp~~f~~ale~l--------gi-----~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~ 170 (538)
.+++.|.+|..+++.+ ++ ++++++||||+. .||.+|+++|+.+++|.+|....... .....|++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~--~~~~~p~~ 308 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDD--LKECKPTL 308 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCC--CCCCCCCE
Confidence 3555668899988877 43 457999999997 79999999999999999986554321 23345888
Q ss_pred EEeCCc
Q psy8912 171 IYFDDE 176 (538)
Q Consensus 171 Ii~d~~ 176 (538)
++.+..
T Consensus 309 vv~~l~ 314 (321)
T TIGR01456 309 IVNDVF 314 (321)
T ss_pred EECCHH
Confidence 887644
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.43 E-value=5.7e-05 Score=70.30 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=62.4
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC-ccccccceeecC---CchHHHHHHHHHhCCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW-NQHFDHKEIFPG---QKTTHFANLKKATGIEYK 493 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL-~~yFd~~~i~~~---~k~~~~~kal~~lgi~pe 493 (538)
.+..+.+.||+.+||++|.+. +.++|.|++. +.+++.+++.+.- ..+|+..-.... .+.. +.|-++.+|-+++
T Consensus 31 ~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~-~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~-~~KdL~~l~~~~~ 107 (159)
T PF03031_consen 31 GGYYVKLRPGLDEFLEELSKH-YEVVIWTSAS-EEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGS-YIKDLSKLGRDLD 107 (159)
T ss_dssp EEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS--HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTE-EE--GGGSSS-GG
T ss_pred cceeEeeCchHHHHHHHHHHh-ceEEEEEeeh-hhhhhHHHHhhhhhccccccccccccccccccc-cccchHHHhhccc
Confidence 444578899999999999655 9999999986 5699999999997 567873221111 1111 2366677788899
Q ss_pred cEEEEecccccHHhHcccCCEEEE
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
++|+|||+......-...++.+-.
T Consensus 108 ~vvivDD~~~~~~~~~~N~i~v~~ 131 (159)
T PF03031_consen 108 NVVIVDDSPRKWALQPDNGIPVPP 131 (159)
T ss_dssp GEEEEES-GGGGTTSGGGEEE---
T ss_pred cEEEEeCCHHHeeccCCceEEecc
Confidence 999999999875544555554443
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00082 Score=67.31 Aligned_cols=197 Identities=19% Similarity=0.271 Sum_probs=103.1
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc-----------ccccCcc---
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY-----------KEIFPAE--- 366 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~--- 366 (538)
-|=+|||.+ +-+...+.+.+|+++|+.+++||=.+. ..+..++..+++..++++ ++||...
T Consensus 4 ~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~-~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~ 82 (256)
T TIGR00099 4 IDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPY-KEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDL 82 (256)
T ss_pred EeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCH
Confidence 366777775 445677889999999999999986653 456778889998754432 2233221
Q ss_pred hhhhhhhhcccCcCCCccceEEeecCC-CCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEE
Q psy8912 367 KKIKHFANLKKDSKIKYKDMVFFDDEE-RNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAA 445 (538)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~l~~~Dldh-~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIA 445 (538)
..++.+-.+-+..++ .+.++..+. +-.+..+++. ......+... .+.+.+ +..+...-++..+.
T Consensus 83 ~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 147 (256)
T TIGR00099 83 DLVEEILNFLKKHGL---DVILYGDDSIYASKNDPEYF--------TIFKKFLGEP---KLEVVD-IQYLPDDILKILLL 147 (256)
T ss_pred HHHHHHHHHHHHcCc---EEEEEeCCeEEecCCCcchh--------HHHHHhccCC---cceecc-chhhhcccceEEEE
Confidence 112222111111121 234444441 1000001111 0001111100 001111 11222233554445
Q ss_pred eCCCchHHHHHHHhhcC---Ccccc-------ccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 446 SRTTEMLRAHQLVDLFN---WNQHF-------DHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 446 Sss~~~~~a~~~L~~lg---L~~yF-------d~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
.... . ....+.+.+. ....+ .+.++.+. +|..-+..+++.+|++++++++|||+.+|+...+.+|+
T Consensus 148 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~ 225 (256)
T TIGR00099 148 FLDP-E-DLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGY 225 (256)
T ss_pred ECCH-H-HHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCc
Confidence 4432 2 2232322222 11111 12344443 68888999999999999999999999999999999998
Q ss_pred EEEEECC
Q psy8912 514 TCIHVKD 520 (538)
Q Consensus 514 ~~i~V~d 520 (538)
.+ ++.+
T Consensus 226 ~~-a~~n 231 (256)
T TIGR00099 226 GV-AMGN 231 (256)
T ss_pred ee-EecC
Confidence 64 4444
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00036 Score=71.92 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=51.1
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|++||||||.+. ....++.+.+.|++|+++|++++++|+++. ..+..+.+.+++
T Consensus 1 ~KLIftDLDGTLLd~----------------------~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~-~ev~~l~~~Lgl 57 (302)
T PRK12702 1 MRLVLSSLDGSLLDL----------------------EFNSYGAARQALAALERRSIPLVLYSLRTR-AQLEHLCRQLRL 57 (302)
T ss_pred CcEEEEeCCCCCcCC----------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHhCC
Confidence 478999999999862 223556689999999999999999999988 888889999998
Q ss_pred CCCC
Q psy8912 96 NQYF 99 (538)
Q Consensus 96 ~~~F 99 (538)
..+|
T Consensus 58 ~~p~ 61 (302)
T PRK12702 58 EHPF 61 (302)
T ss_pred CCeE
Confidence 6543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00042 Score=70.33 Aligned_cols=57 Identities=21% Similarity=0.219 Sum_probs=47.0
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+++|++|+||||+.. .-.+.+...+.|++|+++|++++++|+++. ..+...++.+++
T Consensus 7 ~~lI~~DlDGTLL~~----------------------~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~~~~l~~ 63 (271)
T PRK03669 7 PLLIFTDLDGTLLDS----------------------HTYDWQPAAPWLTRLREAQVPVILCSSKTA-AEMLPLQQTLGL 63 (271)
T ss_pred CeEEEEeCccCCcCC----------------------CCcCcHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHhCC
Confidence 799999999999861 123446688999999999999999999988 777777777775
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0022 Score=58.37 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=79.8
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
.....+|+.+.+.+++|++. +.++|+|+-.. ......++-.|++.+ .++....|..=..+++.++-+.+.|++|
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~-gsl~~lae~~gi~~~----rv~a~a~~e~K~~ii~eLkk~~~k~vmV 99 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRK-GSLVQLAEFVGIPVE----RVFAGADPEMKAKIIRELKKRYEKVVMV 99 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcc-hHHHHHHHHcCCcee----eeecccCHHHHHHHHHHhcCCCcEEEEe
Confidence 34678999999999999999 99999999877 888888888886532 2334567778788888888878999999
Q ss_pred eCCcccHHHHhhcCCeEEEECCC
Q psy8912 131 DDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 131 GDs~~DI~aAk~aG~~tI~V~~G 153 (538)
||..+|+.+-+++....+.+..+
T Consensus 100 GnGaND~laLr~ADlGI~tiq~e 122 (152)
T COG4087 100 GNGANDILALREADLGICTIQQE 122 (152)
T ss_pred cCCcchHHHhhhcccceEEeccC
Confidence 99999999999997776666543
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0004 Score=72.58 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=63.7
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC----CceEEEEcCCCc---HHHHHHHH
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN----KCLVAAASRTSE---ILHAKQIL 90 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~----GikiaIvTn~~~---p~~~~~~L 90 (538)
+|+||+|||||. ...++|++.++++.|+.+ |+++.++||+.. ...++.+.
T Consensus 2 ~~ifD~DGvL~~-----------------------g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~ 58 (321)
T TIGR01456 2 GFAFDIDGVLFR-----------------------GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEIS 58 (321)
T ss_pred EEEEeCcCceEC-----------------------CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHH
Confidence 689999999997 456799999999999998 999999999873 12334444
Q ss_pred HHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 91 NLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 91 ~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
+.+|+.--.+. +.... ......+++++ ..+++||.+. -...++..|+..+
T Consensus 59 ~~lG~~~~~~~--i~~s~--~~~~~ll~~~~---~~v~viG~~~-~~~~l~~~G~~~v 108 (321)
T TIGR01456 59 SLLGVDVSPLQ--VIQSH--SPYKSLVNKYE---KRILAVGTGS-VRGVAEGYGFQNV 108 (321)
T ss_pred HHcCCCCCHHH--HHhhh--HHHHHHHHHcC---CceEEEeChH-HHHHHHHcCCccc
Confidence 77776321111 11111 12233334432 2577787654 3455556776543
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0032 Score=64.38 Aligned_cols=196 Identities=14% Similarity=0.147 Sum_probs=118.5
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeecccccc--c-hhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRTVHI--R-NAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
+-|=.|+|- .++|++.+.|+.|+++|++..+.|-+++. + .+.+|..+.++.- -..+|+.|.-=+.||-+=+.
T Consensus 12 l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~--~~~~i~TS~~at~~~l~~~~ 89 (269)
T COG0647 12 LFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDV--TPDDIVTSGDATADYLAKQK 89 (269)
T ss_pred EEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCC--CHHHeecHHHHHHHHHHhhC
Confidence 457778775 58999999999999999999999877654 3 3444444355422 24678888656766654332
Q ss_pred CcCCCccceEEeecC----------CCCcCCCCC----CcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEE
Q psy8912 378 DSKIKYKDMVFFDDE----------ERNARSISK----LGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVA 443 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld----------h~~~s~~~p----~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikla 443 (538)
+. +.+.++=-+ ....++..| +=++| -.+..-|....+.+..+.+ | ..-
T Consensus 90 ~~----~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g------------~d~~~~~e~l~~a~~~i~~-g-~~f 151 (269)
T COG0647 90 PG----KKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVG------------LDRTLTYEKLAEALLAIAA-G-APF 151 (269)
T ss_pred CC----CEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEe------------cCCCCCHHHHHHHHHHHHc-C-CcE
Confidence 22 455555333 011111111 11111 1111122334555555544 4 566
Q ss_pred EEeCCCchHH------------HHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcc
Q psy8912 444 AASRTTEMLR------------AHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSP 510 (538)
Q Consensus 444 IASss~~~~~------------a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~ 510 (538)
|+|+-+.- + ...+++..+=.+. .+...+.+..|..++++++.++++|++|||+ ..||.+|++
T Consensus 152 I~tNpD~~-~p~~~g~~pgaGai~~~~~~~tg~~~----~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~ 226 (269)
T COG0647 152 IATNPDLT-VPTERGLRPGAGAIAALLEQATGREP----TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKA 226 (269)
T ss_pred EEeCCCcc-ccCCCCCccCcHHHHHHHHHhhCCcc----cccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHH
Confidence 77743311 1 1112222111111 1233345666999999999999999999999 578999999
Q ss_pred cCCEEEEECCCCCH
Q psy8912 511 LGVTCIHVKDGMSH 524 (538)
Q Consensus 511 aGi~~i~V~dg~t~ 524 (538)
+|+.++.|.-|.+.
T Consensus 227 ~G~~t~LV~TGv~~ 240 (269)
T COG0647 227 AGLDTLLVLTGVSS 240 (269)
T ss_pred cCCCEEEEccCCCC
Confidence 99999999999883
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0019 Score=63.55 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=68.3
Q ss_pred CCccCCCHHHHHH-HHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc--cc--eeec--------CCchHHHHHHHHH
Q psy8912 421 IIKYYRDVPAILK-YLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD--HK--EIFP--------GQKTTHFANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L~-~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd--~~--~i~~--------~~k~~~~~kal~~ 487 (538)
...++||+.++|+ .++++|++++|+|++.+. .++++.+.+++..-.+ +. +... +...+...++.+.
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~-~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~ 170 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQP-LVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQK 170 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHH-HHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHH
Confidence 3568999999995 789999999999999865 8888888865532222 11 1101 1112233444445
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.+...+.+.+||.+|+.--..+|-.++-=|+
T Consensus 171 ~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 171 IGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred hCCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 566777889999999999888888877655444
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0017 Score=64.78 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=78.7
Q ss_pred CCceEEEeCCCCCChhhHh---hhh--chh-HHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH---HH
Q psy8912 15 FPKMVVFDLDYTLWPLHVH---DLV--APF-KKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---LH 85 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~---~~i--~~~-~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---~~ 85 (538)
+.++|+.|+|-|+.+..-. ... .+| .+.|...++ .....+.||+.++++..-++|..|..+||..+. ..
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~--a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQ--AKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHh--hcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 3469999999999543311 111 333 233333333 335689999999999999999999999999762 23
Q ss_pred HHHHHHHcCCCCCCcceeecC---CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcC
Q psy8912 86 AKQILNLINLNQYFSNKEIYP---GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLG 144 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd~ie~~~---~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG 144 (538)
....|...|+...-..--.+. ++|...+..+-+-+ .-+++|||...|.......+
T Consensus 156 T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~iVm~vGDNl~DF~d~~~k~ 213 (274)
T COG2503 156 TIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----KIVMLVGDNLDDFGDNAYKK 213 (274)
T ss_pred hHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhcc----ceeeEecCchhhhcchhhhh
Confidence 456677788765443221222 22334455555534 44889999998865544433
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0021 Score=76.33 Aligned_cols=113 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--------CCcc-----------------eeecCCCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--------YFSN-----------------KEIYPGQK 109 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--------~Fd~-----------------ie~~~~~K 109 (538)
++.|++.+.++.|+++|+++.++|+... ..+..+.+.+|+.. .++. ..++.+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNK-ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCH-HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 4689999999999999999999999877 89999999999853 1221 01333344
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 110 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 110 p~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+.=..+++.++-..+.+.|+||+.+|+.|.++|++. |.+..| .+.. ...+|+++.++.
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g--~~~a-----k~aAD~vl~dd~ 674 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG--TEVA-----KEASDMVLADDN 674 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC--cHHH-----HHhcCeEEccCC
Confidence 5444555566665677899999999999999999994 344333 2221 235788887743
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0035 Score=62.24 Aligned_cols=54 Identities=24% Similarity=0.207 Sum_probs=42.4
Q ss_pred ccccccccc---cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc
Q psy8912 305 EDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY 359 (538)
Q Consensus 305 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (538)
-|=+|||.+ ..|...+.+.+|+++|+++.+||-.+.. .+..+++.||+.+.|.+
T Consensus 4 ~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~-~~~~~~~~lg~~~~~I~ 60 (225)
T TIGR02461 4 TDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRA-EQEYYREELGVEPPFIV 60 (225)
T ss_pred EeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCCCCcEEE
Confidence 466788875 6677889999999999999999744433 46779999999776654
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0018 Score=64.91 Aligned_cols=101 Identities=16% Similarity=0.287 Sum_probs=76.0
Q ss_pred CCCccCCCHHHHHHHH--HHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC----------------------
Q psy8912 420 AIIKYYRDVPAILKYL--KQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG---------------------- 475 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~L--k~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~---------------------- 475 (538)
..+++-||+.++++.+ ++.|+.+.|+|-++.- .++.+|++.||.+.|+ .|++.
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~-fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSF-FIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHh-HHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCccCCCCCc
Confidence 4578999999999999 5689999999999865 8999999999999886 12111
Q ss_pred -----CchHHHHHHHHH---hCCCCCcEEEEecccccHHhHcccCC-EEEEECCCCC
Q psy8912 476 -----QKTTHFANLKKA---TGIEYKDMVFFDDEERNSHDVSPLGV-TCIHVKDGMS 523 (538)
Q Consensus 476 -----~k~~~~~kal~~---lgi~pee~l~~eDs~~~I~aAk~aGi-~~i~V~dg~t 523 (538)
.|...+.+.++. -|+.++.++||||..+|+..+.+.+- .++...-|+.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~ 201 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYP 201 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCCh
Confidence 133334444444 37899999999999999999988554 3444444543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0012 Score=63.24 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=69.7
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--------------CchH
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--------------QKTT 479 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--------------~k~~ 479 (538)
+...--..+.+-||.+++.+|.++++++..|+||...+ .+.++++.++=.+-.+...|++. .+..
T Consensus 64 ile~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~-fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds 142 (220)
T COG4359 64 ILEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDP-FIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDS 142 (220)
T ss_pred HHHHHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCch-HHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCcc
Confidence 34444445889999999999999999999999999877 88999998873322222222111 0111
Q ss_pred HH----HHHHHHhCCCCCcEEEEecccccHHhHcccC
Q psy8912 480 HF----ANLKKATGIEYKDMVFFDDEERNSHDVSPLG 512 (538)
Q Consensus 480 ~~----~kal~~lgi~pee~l~~eDs~~~I~aAk~aG 512 (538)
+| -+.++++.-+++.++|+||+..|+.||+..-
T Consensus 143 ~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 143 QFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred ccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence 11 3445566778889999999999999999744
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00092 Score=67.14 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=36.4
Q ss_pred CchHHHHHHHHHhCCC--CCcEEEEecccccHHhHcccCCEEE
Q psy8912 476 QKTTHFANLKKATGIE--YKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~--pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+|...+.++++.+|++ ++++++|||+.+|+...+.+|..++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~va 218 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVV 218 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEE
Confidence 6777789999999999 9999999999999999998886553
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0036 Score=57.05 Aligned_cols=93 Identities=13% Similarity=0.175 Sum_probs=75.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
=+||+.|.+++++|++. +.+.|||.-. .-...+.++-.|+.-+ -+..+.++..=.++++.|+-+.+-|++|||.
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr-~gsl~~lae~~gi~~~----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnG 102 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDR-KGSLVQLAEFVGIPVE----RVFAGADPEMKAKIIRELKKRYEKVVMVGNG 102 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCc-chHHHHHHHHcCCcee----eeecccCHHHHHHHHHHhcCCCcEEEEecCC
Confidence 36999999999999999 9999999764 4467778888886543 2344466666788889999999999999999
Q ss_pred cccHHhHcccCCEEEEECC
Q psy8912 502 ERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~d 520 (538)
.||+.+-++|-+-++-+.+
T Consensus 103 aND~laLr~ADlGI~tiq~ 121 (152)
T COG4087 103 ANDILALREADLGICTIQQ 121 (152)
T ss_pred cchHHHhhhcccceEEecc
Confidence 9999999998777666654
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.001 Score=66.71 Aligned_cols=45 Identities=18% Similarity=0.176 Sum_probs=38.7
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
+|+|+||+||||... .-++-|...++|++|+++|++++++|+++.
T Consensus 5 ~klia~DlDGTLL~~----------------------~~~is~~~~~ai~~l~~~Gi~~viaTGR~~ 49 (247)
T PTZ00174 5 KTILLFDVDGTLTKP----------------------RNPITQEMKDTLAKLKSKGFKIGVVGGSDY 49 (247)
T ss_pred CeEEEEECcCCCcCC----------------------CCCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 799999999999861 234566789999999999999999999866
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0016 Score=59.35 Aligned_cols=50 Identities=26% Similarity=0.131 Sum_probs=38.3
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
|+|+||+||||....-.. .....+.+++.+.|+.|+++|+.++++|+.+.
T Consensus 2 K~i~~DiDGTL~~~~~~~----------------y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~ 51 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGD----------------YANVAPILAVIEKLRHYKALGFEIVISSSRNM 51 (126)
T ss_pred CEEEEeCCCCcccCCCCc----------------ccccccCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 799999999996410000 01145778899999999999999999999876
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG2630|consensus | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0037 Score=61.87 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=75.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-C-------CCCCCcceeecCCC-CHHHHHHHHHHcC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------LNQYFSNKEIYPGQ-KTTHFESLKKATG 121 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-g-------L~~~Fd~ie~~~~~-Kp~~f~~ale~lg 121 (538)
.-...+|+++..+++..++.|++++|.|+.+. . ++.++-.+ + +..|||. -.+.+ ....|..+.+..|
T Consensus 119 ~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv-~-AqKllfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig 194 (254)
T KOG2630|consen 119 ELKAHVYADVLPAIERWSGEGVRVYIYSSGSV-A-AQKLLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIG 194 (254)
T ss_pred cccccccchhHHHHHHHhhcCceEEEEcCCcH-H-HHHHHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhC
Confidence 33447999999999999999999999999966 3 33433322 1 2346665 23332 3478999999999
Q ss_pred CCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 122 IEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 122 i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
.+|.+++|.-|-+....+|+.+|+.+..+.
T Consensus 195 ~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~ 224 (254)
T KOG2630|consen 195 KSPREILFLTDVPREAAAARKAGLQAGLVS 224 (254)
T ss_pred CChhheEEeccChHHHHHHHhcccceeeee
Confidence 999999999999999999999999887664
|
|
| >KOG2961|consensus | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0045 Score=57.71 Aligned_cols=116 Identities=13% Similarity=0.044 Sum_probs=76.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-C-ceEEEEcCCCcH-------HH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-K-CLVAAASRTSEI-------LH 85 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-G-ikiaIvTn~~~p-------~~ 85 (538)
-+|+|+||-|+|+.- .......|.-..-++++++. | ..++++||+-.- ..
T Consensus 42 ~ikavVlDKDNcit~---------------------P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~ 100 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITA---------------------PYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSK 100 (190)
T ss_pred CceEEEEcCCCeeeC---------------------CcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHH
Confidence 489999999999932 12334455555667777764 4 778999986320 33
Q ss_pred HHHHHHHcCCCCCCcceeecCCCCHHHHHHHHH-HcC----CCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCc
Q psy8912 86 AKQILNLINLNQYFSNKEIYPGQKTTHFESLKK-ATG----IEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale-~lg----i~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
+...-++.|+.-. --...||..-.+..+ .+| ..+++++||||+. .||..|...|.-.+|...|...
T Consensus 101 Ak~le~k~gIpVl-----RHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 101 AKALEAKIGIPVL-----RHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA 172 (190)
T ss_pred HHHHHHhhCCceE-----eecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence 4444455564311 123356633333332 233 5789999999996 5999999999999999988653
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0026 Score=62.22 Aligned_cols=64 Identities=13% Similarity=-0.018 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCC----CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 84 LHAKQILNLINLN----QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 84 ~~~~~~L~~lgL~----~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
......+...++. .+|..+...+..|+.....+++.+|+++++|++|||+.+|+.+.+.+|...
T Consensus 151 ~~~~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 151 PRFTALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred HHHHHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 4445566666654 344332222335888899999999999999999999999999999999764
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.01 Score=59.60 Aligned_cols=59 Identities=25% Similarity=0.327 Sum_probs=42.7
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccC
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFP 364 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 364 (538)
.|=+|||.+ .-+...+.++.|+++|++.++||-.+. ..+..++..+++..++++ ..||-
T Consensus 4 ~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~-~~~~~~~~~~~~~~~~I~~NGa~i~~ 69 (256)
T TIGR01486 4 TDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTA-AEVEYLRKELGLEDPFIVENGGAIYG 69 (256)
T ss_pred EcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCCcEEEcCCeEEEe
Confidence 355677665 344578899999999999999984443 456889999998765554 35554
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0039 Score=71.38 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=77.2
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.+.|++.+.+++|++.|+++.++|+... ..+..+.+.+|++++|.. ..|..|-...+...+ ....+.|+||+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~-~ta~~iA~~lGI~~v~a~--~~PedK~~~v~~lq~----~g~~VamvGDG~ 518 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNR-LTAAAIAAEAGVDDFIAE--ATPEDKIALIRQEQA----EGKLVAMTGDGT 518 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCEEEcC--CCHHHHHHHHHHHHH----cCCeEEEECCCc
Confidence 5669999999999999999999999977 999999999999765543 223333344444332 334699999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|..+-+++++. +.+..|. .... +.+|++.-|+
T Consensus 519 NDapAL~~AdvG-iAm~~gt--~~ak-----eaadivLldd 551 (675)
T TIGR01497 519 NDAPALAQADVG-VAMNSGT--QAAK-----EAANMVDLDS 551 (675)
T ss_pred chHHHHHhCCEe-EEeCCCC--HHHH-----HhCCEEECCC
Confidence 999999999886 4455443 2221 2357777664
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0042 Score=71.12 Aligned_cols=107 Identities=13% Similarity=0.114 Sum_probs=79.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.+.|++.+.+++||+.|+++.++|+-+. ..+..+.+.+|+.++|.. ..|+-=..+.+.++-.-+-+.|+||+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGI~~v~A~------~~PedK~~iV~~lQ~~G~~VaMtGDGv 513 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNE-LTAATIAKEAGVDRFVAE------CKPEDKINVIREEQAKGHIVAMTGDGT 513 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCceEEcC------CCHHHHHHHHHHHHhCCCEEEEECCCh
Confidence 5679999999999999999999999977 999999999999765543 456443333344443445688999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
||..|-+++.+. +.+..|.+ .. .+.+|+|.-|+.
T Consensus 514 NDAPALa~ADVG-IAMgsGTd--vA-----keAADiVLldd~ 547 (673)
T PRK14010 514 NDAPALAEANVG-LAMNSGTM--SA-----KEAANLIDLDSN 547 (673)
T ss_pred hhHHHHHhCCEE-EEeCCCCH--HH-----HHhCCEEEcCCC
Confidence 999999999884 55655542 22 234688887643
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0032 Score=63.66 Aligned_cols=199 Identities=16% Similarity=0.196 Sum_probs=104.1
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccCcchhh-------
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFPAEKKI------- 369 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------- 369 (538)
+-|=+|||++ +-|...+.+++|+++|+..++||=-+.. .++.+++.+++..++++ ..||-...++
T Consensus 6 ~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~-~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~ 84 (272)
T PRK15126 6 AFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVL-EMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLP 84 (272)
T ss_pred EEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHH-HHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCC
Confidence 4577888875 6677889999999999999999865544 46789999999876553 2344211111
Q ss_pred -hhhhhcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCC-ceEEEEe
Q psy8912 370 -KHFANLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNN-CLVAAAS 446 (538)
Q Consensus 370 -~~~~~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~G-iklaIAS 446 (538)
+-.+.|-+- ..... .+.++.-|..-...-.+.. . . . ....+..... ....+ +.... +++.+..
T Consensus 85 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~----~-~--~~~~~~~~~~-~~~~~----~~~~~~~ki~~~~ 150 (272)
T PRK15126 85 ADVAELVLHQQWDTRA-SMHVFNDDGWFTGKEIPAL-L----Q-A--HVYSGFRYQL-IDLKR----LPAHGVTKICFCG 150 (272)
T ss_pred HHHHHHHHHHhhhcCc-EEEEEcCCeEEecCCcHHH-H----H-H--HHhcCCceEE-ecHHH----ccccCceEEEEEC
Confidence 111111110 01111 2334433311000000100 0 0 0 0000100100 11111 11122 3444433
Q ss_pred CCCchHHHHH---HH-hhcC--Ccccc---ccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 447 RTTEMLRAHQ---LV-DLFN--WNQHF---DHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 447 ss~~~~~a~~---~L-~~lg--L~~yF---d~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.. . .... .+ +.++ +.-.+ .+.++.+. +|..-+..+++.+|+++++++.|||+.||++.-+.+|. .
T Consensus 151 -~~-~-~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~ 226 (272)
T PRK15126 151 -DH-D-DLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGR-G 226 (272)
T ss_pred -CH-H-HHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCC-c
Confidence 21 1 2222 22 2222 11000 12344443 68888999999999999999999999999999999996 5
Q ss_pred EEECCC
Q psy8912 516 IHVKDG 521 (538)
Q Consensus 516 i~V~dg 521 (538)
+++.++
T Consensus 227 vAm~Na 232 (272)
T PRK15126 227 FIMGNA 232 (272)
T ss_pred eeccCC
Confidence 566653
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0049 Score=70.69 Aligned_cols=107 Identities=11% Similarity=0.105 Sum_probs=78.3
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.+.||+.+.+++||+.|+++.++|+-+. ..+..+.+.+|++++|.. ..|+-=..+.++++-.-+-+.|+||+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGId~v~A~------~~PedK~~iV~~lQ~~G~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFLAE------ATPEDKLALIRQEQAEGRLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcEEEcc------CCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 4569999999999999999999999977 999999999999765443 455433333333333345589999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|..|-+++.+. +.+..|.+ . ..+.+|+|.-|+.
T Consensus 518 NDAPALa~ADVG-IAMgsGTd--v-----AkeAADiVLldd~ 551 (679)
T PRK01122 518 NDAPALAQADVG-VAMNSGTQ--A-----AKEAGNMVDLDSN 551 (679)
T ss_pred chHHHHHhCCEe-EEeCCCCH--H-----HHHhCCEEEeCCC
Confidence 999999999874 44655542 2 1235688887643
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0092 Score=60.00 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=42.4
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|..-+..+++.+|++++++++|||+.||++.-+.+|. .+++.++
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~-~vAm~NA 234 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGK-GCIMGNA 234 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCC-CeeecCC
Confidence 45443 68888999999999999999999999999999999997 4566654
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0023 Score=60.34 Aligned_cols=93 Identities=9% Similarity=0.121 Sum_probs=60.8
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCC---Cc----h------HHHHHHHhhcCCccccc-cce--eecCCchHHHHHHHHH
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRT---TE----M------LRAHQLVDLFNWNQHFD-HKE--IFPGQKTTHFANLKKA 487 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss---~~----~------~~a~~~L~~lgL~~yFd-~~~--i~~~~k~~~~~kal~~ 487 (538)
+.|+|.+.|++|.+.||++.|+|+- .. . ...+.+++.+++.-++- ... .+..+.+.++..+++.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~ 109 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKD 109 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCC
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHh
Confidence 4568999999999999999999953 11 1 24566778887762211 001 1112456778988888
Q ss_pred hC----CCCCcEEEEecc-----------cccHHhHcccCCEEE
Q psy8912 488 TG----IEYKDMVFFDDE-----------ERNSHDVSPLGVTCI 516 (538)
Q Consensus 488 lg----i~pee~l~~eDs-----------~~~I~aAk~aGi~~i 516 (538)
++ ++.++++||||+ ..|.+=|.+.|++..
T Consensus 110 ~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 110 YNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred ccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 76 599999999997 567888888998763
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0016 Score=62.09 Aligned_cols=130 Identities=11% Similarity=0.117 Sum_probs=77.7
Q ss_pred CceEEEeCCCCCChh---h--Hhhhh-chhHHHH--HHHHhh----hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH
Q psy8912 16 PKMVVFDLDYTLWPL---H--VHDLV-APFKKIG--QKVMDA----KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~---~--~~~~i-~~~~~~~--~~i~~~----~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p 83 (538)
+=+|-||+|.|++-+ + ..+.+ |+-.... ..+.+. +....-|-.-+++++..-.++|=.++.+|+.+.
T Consensus 63 Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~- 141 (237)
T COG3700 63 PIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP- 141 (237)
T ss_pred CeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC-
Confidence 557999999999211 1 12222 2222222 222222 333333445577888888889999999999865
Q ss_pred HHHH----HHHHHcCCCCCCcceeecCCCCH--HHH--HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 84 LHAK----QILNLINLNQYFSNKEIYPGQKT--THF--ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 84 ~~~~----~~L~~lgL~~~Fd~ie~~~~~Kp--~~f--~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
...+ .+.+.+.+...-.. .+.+.|| .-| ...++.-++ -++.|||.+||.||+++|++.|-+..
T Consensus 142 gk~d~vsk~Lak~F~i~~m~pv--~f~Gdk~k~~qy~Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 142 GKTDTVSKTLAKNFHITNMNPV--IFAGDKPKPGQYTKTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred CcccccchhHHhhcccCCCcce--eeccCCCCcccccccHHHHhcCc----eEEecCCchhhhHHHhcCccceeEEe
Confidence 3222 23334455433332 3444444 333 233444454 78999999999999999999887754
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0037 Score=63.86 Aligned_cols=68 Identities=32% Similarity=0.418 Sum_probs=57.9
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+..|+||+|.||.... ...--..|.+.+.|.+|++.|..+++-|.+++ +.+...++.++
T Consensus 121 ~phVIVfDlD~TLItd~-------------------~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~-eHV~~sl~~~~ 180 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDE-------------------GDVRIRDPAVYDSLRELKEQGCVLVLWSYGNR-EHVRHSLKELK 180 (297)
T ss_pred CCcEEEEECCCcccccC-------------------CccccCChHHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHHhC
Confidence 47899999999997521 11112568899999999999999999999999 99999999999
Q ss_pred CCCCCcce
Q psy8912 95 LNQYFSNK 102 (538)
Q Consensus 95 L~~~Fd~i 102 (538)
+.++|+.+
T Consensus 181 L~~~Fd~i 188 (297)
T PF05152_consen 181 LEGYFDII 188 (297)
T ss_pred CccccEEE
Confidence 99999976
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0036 Score=71.97 Aligned_cols=106 Identities=15% Similarity=0.177 Sum_probs=79.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
++.|++.+.++.||+.|+++.++|+-+. ..++.+.+.+|+++++.. ..|..|.+..+++-+ .-..+.||||+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~-~~A~~iA~~lGId~v~Ae--llPedK~~~V~~l~~----~g~~VamVGDGI 609 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNR-RTAEAIAKELGIDEVRAE--LLPEDKAEIVRELQA----EGRKVAMVGDGI 609 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcChHhhecc--CCcHHHHHHHHHHHh----cCCEEEEEeCCc
Confidence 3458999999999999999999999988 999999999999877766 556666666665543 336799999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
||-.+-..+.+. +.+..|.. - ..+-+|.+.-..
T Consensus 610 NDAPALA~AdVG-iAmG~GtD--v-----A~eaADvvL~~~ 642 (713)
T COG2217 610 NDAPALAAADVG-IAMGSGTD--V-----AIEAADVVLMRD 642 (713)
T ss_pred hhHHHHhhcCee-EeecCCcH--H-----HHHhCCEEEecC
Confidence 998888777663 44544432 2 223467777553
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0082 Score=59.46 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=38.6
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+|...+..+++++|+++++|++|||+.+|+...+.+|.-+ +|.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~n 202 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGN 202 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcC
Confidence 7888899999999999999999999999999999887544 5655
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.024 Score=57.52 Aligned_cols=54 Identities=22% Similarity=0.321 Sum_probs=41.9
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCc-ccc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSD-FFD 358 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 358 (538)
+-|=+|||++ +.+...+.+..|+++||+.++||--+. ..+..++..|++.+ +++
T Consensus 11 ~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~~~~l~~~~~~~I 69 (271)
T PRK03669 11 FTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTA-AEMLPLQQTLGLQGLPLI 69 (271)
T ss_pred EEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHhCCCCCcEE
Confidence 4578899985 456677889999999999999986654 45688999999963 443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0033 Score=71.43 Aligned_cols=58 Identities=26% Similarity=0.234 Sum_probs=46.3
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.|+|++|+||||.+. .-...+...+.|+.|+++|++++++|+++. ..+...++.+++
T Consensus 416 ~KLIfsDLDGTLLd~----------------------d~~i~~~t~eAL~~L~ekGI~~VIATGRs~-~~i~~l~~~Lgl 472 (694)
T PRK14502 416 KKIVYTDLDGTLLNP----------------------LTYSYSTALDALRLLKDKELPLVFCSAKTM-GEQDLYRNELGI 472 (694)
T ss_pred eeEEEEECcCCCcCC----------------------CCccCHHHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCC
Confidence 689999999999862 113445678999999999999999999988 667777777765
Q ss_pred C
Q psy8912 96 N 96 (538)
Q Consensus 96 ~ 96 (538)
.
T Consensus 473 ~ 473 (694)
T PRK14502 473 K 473 (694)
T ss_pred C
Confidence 4
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.012 Score=59.25 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=40.1
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|..-+..+++.+|++++++++|||+.||++.-+.+|. .+++.++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~NA 240 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV-GVAMGNA 240 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc-eEEecCc
Confidence 78888999999999999999999999999999999998 5556553
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0087 Score=71.15 Aligned_cols=99 Identities=10% Similarity=0.094 Sum_probs=74.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--------ccccc-----------------eeecC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--------HFDHK-----------------EIFPG 475 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--------yFd~~-----------------~i~~~ 475 (538)
+-+++||+.+.++.|++.|+++.++|..+ ++.+..+.+.+|+.. +++.. .++.+
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMITGDN-KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEecCCC-HHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 45689999999999999999999999775 558999999999964 22210 12333
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
..|++=.++++.++-..+.+.++||+.||+.+.++|++- |++..|
T Consensus 614 ~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g 658 (917)
T TIGR01116 614 VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG 658 (917)
T ss_pred cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC
Confidence 334444666667776778888999999999999999993 344333
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.01 Score=57.58 Aligned_cols=97 Identities=16% Similarity=0.161 Sum_probs=72.8
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--------ccc---------c--ceeecCCch
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--------HFD---------H--KEIFPGQKT 478 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--------yFd---------~--~~i~~~~k~ 478 (538)
......+-|||+|+.+.|+++|..+.++|..-++ .+..+-..|||.. .|| . ....++.|+
T Consensus 83 ~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~-~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa 161 (227)
T KOG1615|consen 83 IKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQ-LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKA 161 (227)
T ss_pred hcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHH-HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccH
Confidence 3446778999999999999999999999988765 8899999999964 122 0 011223577
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
+.+..+.+ +.....+++|||.-+|+++... |..+++.
T Consensus 162 ~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~ 198 (227)
T KOG1615|consen 162 EVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGF 198 (227)
T ss_pred HHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhcc
Confidence 77665544 9999999999999999887665 4444443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.016 Score=68.62 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=79.0
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CCc-----------------ceeecCCCCHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGQKTTHFES 115 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~Fd-----------------~ie~~~~~Kp~~f~~ 115 (538)
++.|++.+.+++|++.|+++.++|+-.. ..+..+.+.+|+.. ... ...++.+..|+-=..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~-~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNE-IVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 4568999999999999999999999877 99999999999852 110 012333445543333
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
+.+.+.-.-+.+.|+||+.+|..|-++|.+. |.+..|.. ...+.+|+|.-++.-.
T Consensus 594 iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gtd-------vAk~aADiVLldd~~~ 648 (867)
T TIGR01524 594 IIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAAD-------IAKEASDIILLEKSLM 648 (867)
T ss_pred HHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCccH-------HHHHhCCEEEecCChH
Confidence 3333333345788999999999999999885 44554432 1223578888775433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.016 Score=67.47 Aligned_cols=117 Identities=9% Similarity=-0.008 Sum_probs=80.8
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-Ccc-----------------------eeecCCCCH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-FSN-----------------------KEIYPGQKT 110 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-Fd~-----------------------ie~~~~~Kp 110 (538)
++.|++.+.++.|++.|+++.++|+-+. ..+..+.+.+|+.+. +.. ..++.+-.|
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHL-AIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 5679999999999999999999999977 999999999999641 100 012333455
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhH
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHV 180 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~ 180 (538)
+-=..+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+..|. +. ..+.+|+|.-++.-..+
T Consensus 521 e~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gt--dv-----AkeaADivLl~d~l~~I 582 (755)
T TIGR01647 521 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGAT--DA-----ARSAADIVLTEPGLSVI 582 (755)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCc--HH-----HHHhCCEEEEcCChHHH
Confidence 433333343433446799999999999999999885 4455433 22 22357888877543333
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.029 Score=52.99 Aligned_cols=117 Identities=16% Similarity=0.149 Sum_probs=70.0
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHHc--
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLI-- 93 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~l-- 93 (538)
.|++|+||||..+-... .+..- ...-...||+.++...++++||++.-+|+.+.. ...+..|...
T Consensus 1 VVvsDIDGTiT~SD~~G----------~i~~~-~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q 69 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLG----------HILPI-LGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQ 69 (157)
T ss_pred CEEEeccCCcCccchhh----------hhhhc-cCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHh
Confidence 48999999996532211 11111 112267899999999999999999999998641 3334455544
Q ss_pred ---CCCC---CCc------ce--eecCCCCHHHHH-----HHHHHcCCCCCc-EEEEeCCcccHHHHhhcCCe
Q psy8912 94 ---NLNQ---YFS------NK--EIYPGQKTTHFE-----SLKKATGIEYKD-MVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 94 ---gL~~---~Fd------~i--e~~~~~Kp~~f~-----~ale~lgi~P~e-~L~IGDs~~DI~aAk~aG~~ 146 (538)
++.. ++. .. +.. .++|+.|+ .+...+.-.... ..-+|++..|+.+-+++|+.
T Consensus 70 ~~~~lP~Gpv~~sP~~l~~al~rEvi-~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 70 QGHNLPDGPVLLSPDSLFSALHREVI-SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred CCccCCCCCEEECCcchhhhhhcccc-ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3321 111 11 111 23565543 222332211222 22389999999999999996
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.018 Score=68.44 Aligned_cols=116 Identities=15% Similarity=0.127 Sum_probs=79.9
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--C-----Cc------------ceeecCCCCHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--Y-----FS------------NKEIYPGQKTTHFES 115 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~-----Fd------------~ie~~~~~Kp~~f~~ 115 (538)
++-|++.+.++.|+++|+++.++|+-.. ..+..+.+.+|+.. . ++ ...++.+..|+.=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSE-LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 4568999999999999999999999977 99999999999951 0 00 002333445644333
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhh
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEH 179 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~ 179 (538)
+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+..|. +. ..+.+|+|.-++.-..
T Consensus 629 IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gt--dv-----AkeaADiVLldd~~~~ 684 (902)
T PRK10517 629 IVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAV--DI-----AREAADIILLEKSLMV 684 (902)
T ss_pred HHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcC--HH-----HHHhCCEEEecCChHH
Confidence 3333333445688999999999999999885 4455443 21 1235788887754333
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.018 Score=56.33 Aligned_cols=112 Identities=21% Similarity=0.179 Sum_probs=72.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
-|++|+|+|+||+...-. ........-|++.++|+.+.+. +.++|.|.++. .+++.++..+++
T Consensus 21 kklLVLDLDeTLvh~~~~---------------~~~~~~~kRP~l~eFL~~~~~~-feIvVwTAa~~-~ya~~~l~~l~~ 83 (195)
T TIGR02245 21 KKLLVLDIDYTLFDHRSP---------------AETGEELMRPYLHEFLTSAYED-YDIVIWSATSM-KWIEIKMTELGV 83 (195)
T ss_pred CcEEEEeCCCceEccccc---------------CCCceEEeCCCHHHHHHHHHhC-CEEEEEecCCH-HHHHHHHHHhcc
Confidence 379999999999852100 0012345669999999999985 99999999988 999999999875
Q ss_pred CCC--Ccce---ee-------c--CC---CCHHHHHHHHHHcC--CCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 96 NQY--FSNK---EI-------Y--PG---QKTTHFESLKKATG--IEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 96 ~~~--Fd~i---e~-------~--~~---~Kp~~f~~ale~lg--i~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
... +... +. . .+ -|+ ...+-+++| .+.+++++|+|++.....--..|+.
T Consensus 84 ~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 84 LTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred cCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 321 1100 00 0 01 122 222223454 3779999999998765444444554
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.021 Score=66.16 Aligned_cols=61 Identities=20% Similarity=0.193 Sum_probs=42.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhh-CCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKE-NKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~-~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
..++++||+||||.+..- ......+-+.+.+.|+.|.+ .|+.++|+|+.+. ..++..+...
T Consensus 491 ~~rLi~~D~DGTL~~~~~-----------------~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~-~~l~~~~~~~ 552 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAP-----------------DPELAVPDKELRDLLRRLAADPNTDVAIISGRDR-DTLERWFGDL 552 (726)
T ss_pred cceEEEEecCccccCCCC-----------------CcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH-HHHHHHhCCC
Confidence 468999999999976210 01123455778888899888 4889999998876 6565555433
|
|
| >KOG2630|consensus | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.02 Score=56.80 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=77.1
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcC----C----ccccccceeecCCchHHHHHHHHHhCCCCC
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN----W----NQHFDHKEIFPGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lg----L----~~yFd~~~i~~~~k~~~~~kal~~lgi~pe 493 (538)
-.+|++|...++..+..|+++.|-||-.. .|+++|=... + ..|||. .++-..+...|.++.+.+|.+|.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv--~AqKllfg~s~~gdl~~y~~gyfDt-~iG~K~e~~sy~~I~~~Ig~s~~ 198 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSV--AAQKLLFGYSDAGDLRKYISGYFDT-TIGLKVESQSYKKIGHLIGKSPR 198 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcH--HHHHHHHcccCcchHHHHhhhhhhc-cccceehhHHHHHHHHHhCCChh
Confidence 36899999999999999999999998864 4566653222 2 346773 33333456669999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
|++|.=|...-..+|+.+|+.+..+..
T Consensus 199 eiLfLTd~~~Ea~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 199 EILFLTDVPREAAAARKAGLQAGLVSR 225 (254)
T ss_pred heEEeccChHHHHHHHhcccceeeeec
Confidence 999999999999999999999988866
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.012 Score=67.40 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=70.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-.++||+.+.+++|++.|+++.+.|.-+ +..+..+-+.+|+.++|. ...+.+|....... ++ ....+.|+||.
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~-~~ta~~iA~~lGI~~v~a--~~~PedK~~~v~~l-q~---~g~~VamvGDG 517 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDN-RLTAAAIAAEAGVDDFIA--EATPEDKIALIRQE-QA---EGKLVAMTGDG 517 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCEEEc--CCCHHHHHHHHHHH-HH---cCCeEEEECCC
Confidence 3689999999999999999999999876 458999999999988775 33333444444333 22 34579999999
Q ss_pred cccHHhHcccCCEEEEECCC
Q psy8912 502 ERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~dg 521 (538)
.||..+-++|++-+. +..|
T Consensus 518 ~NDapAL~~AdvGiA-m~~g 536 (675)
T TIGR01497 518 TNDAPALAQADVGVA-MNSG 536 (675)
T ss_pred cchHHHHHhCCEeEE-eCCC
Confidence 999999999987654 4344
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.042 Score=64.80 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=39.3
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHh-hhCCceEEEEcCCCcHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYL-KENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~L-k~~GikiaIvTn~~~p~~~~~~L 90 (538)
+.+++++|+||||.+.. .....+-|++.++|+.| ++.|..++|+|+.+. ..++..+
T Consensus 595 ~~rlI~LDyDGTLlp~~-------------------~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~-~~L~~~f 651 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA-------------------SIDKSPSSKSIDILNTLCRDKNNMVFIVSARSR-KTLADWF 651 (854)
T ss_pred cCeEEEEecCCcccCCc-------------------cccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCH-HHHHHHh
Confidence 57899999999998621 01234557788888887 566888888888755 5444444
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.029 Score=54.82 Aligned_cols=114 Identities=12% Similarity=0.086 Sum_probs=71.5
Q ss_pred CccceEEeecC----CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 382 KYKDMVFFDDE----ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 382 ~~~~l~~~Dld----h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
+-+.++|+||| |... ..+ ...+...|++.+||+++.+ .|.++|-|++. ++++..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~-~~~------------------~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~-~~ya~~~ 77 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRS-PAE------------------TGEELMRPYLHEFLTSAYE-DYDIVIWSATS-MKWIEIK 77 (195)
T ss_pred CCCcEEEEeCCCceEcccc-cCC------------------CceEEeCCCHHHHHHHHHh-CCEEEEEecCC-HHHHHHH
Confidence 44579999999 5431 001 1124578999999999999 59999999987 4699999
Q ss_pred HhhcCCccc--c------ccc---eeecC-Cc---hHHHHHHHHHhC--CCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 458 VDLFNWNQH--F------DHK---EIFPG-QK---TTHFANLKKATG--IEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 458 L~~lgL~~y--F------d~~---~i~~~-~k---~~~~~kal~~lg--i~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
++.+++... | |.- ..... .. ......+-+++| .+.+++|+|||+......-=..|+.+-
T Consensus 78 l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~ 153 (195)
T TIGR02245 78 MTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIR 153 (195)
T ss_pred HHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccC
Confidence 999886431 1 100 00000 11 111222222343 477999999999987554444555554
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.045 Score=65.37 Aligned_cols=114 Identities=13% Similarity=0.045 Sum_probs=78.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC---------Cc------------ceeecCCCCHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY---------FS------------NKEIYPGQKTTHF 113 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~---------Fd------------~ie~~~~~Kp~~f 113 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+..- |+ ...++.+..|+-=
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNI-DTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 5668999999999999999999999977 999999999998521 11 1123445566443
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
..+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+. .|. +. ....+|+++.++.-
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVG-IAmg~~gt--dv-----Ak~aADivL~dd~f 714 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVG-FSMGISGT--EV-----AKEASDIILLDDNF 714 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcc-eecCCCcc--HH-----HHHhCCEEEecCCH
Confidence 333333333345689999999999999999775 2243 332 21 22357888887543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.03 Score=66.54 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=78.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-------Cc------------ceeecCCCCHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-------FS------------NKEIYPGQKTTHFES 115 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-------Fd------------~ie~~~~~Kp~~f~~ 115 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+..- ++ ...++.+..|+-=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNP-IVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 4568999999999999999999999977 999999999998520 00 002333445644333
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+..|.. . ..+.+|+|.-++.
T Consensus 629 iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtd--v-----AkeaADiVLldd~ 681 (903)
T PRK15122 629 VLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGAD--I-----AKESADIILLEKS 681 (903)
T ss_pred HHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcccH--H-----HHHhcCEEEecCC
Confidence 3333333345689999999999999999885 55654432 2 2235788887654
|
|
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.021 Score=56.48 Aligned_cols=101 Identities=14% Similarity=0.244 Sum_probs=75.3
Q ss_pred CCccCCCHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHhhcCCccccccceeecC------------------------
Q psy8912 421 IIKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG------------------------ 475 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~------------------------ 475 (538)
.+++-||+.++++.+++.|. .+-|.|-++.- .++..|++.|+.+.|. .|.+.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsf-FIe~~Lea~~~~d~F~--~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSF-FIEEILEAAGIHDLFS--EIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchh-HHHHHHHHccHHHHHH--HHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 36788999999999999997 89999988765 8899999999998887 22211
Q ss_pred ----CchH---HHHHHHHHhCCCCCcEEEEecccccHHhHcc-cCCEEEEECCCCCH
Q psy8912 476 ----QKTT---HFANLKKATGIEYKDMVFFDDEERNSHDVSP-LGVTCIHVKDGMSH 524 (538)
Q Consensus 476 ----~k~~---~~~kal~~lgi~pee~l~~eDs~~~I~aAk~-aGi~~i~V~dg~t~ 524 (538)
.|.. +|..-.-+-|++++.++|+||+-+|+....+ .+.+++...-|+..
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0111 1332223358999999999999999998887 56666655556554
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.018 Score=55.85 Aligned_cols=194 Identities=23% Similarity=0.223 Sum_probs=102.0
Q ss_pred cccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cc-cCcchhhhhhhhccc
Q psy8912 306 DAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EI-FPAEKKIKHFANLKK 377 (538)
Q Consensus 306 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~ 377 (538)
|=+|||.+ +=|...+.++.|++.|+++++||=.+ +.-+..+++.+++..++++- -+ ++. .|+-|-+.|.+
T Consensus 4 DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~-~~~~~~~~~~~~~~~~~I~~nGa~i~~~~-~~~l~~~~i~~ 81 (254)
T PF08282_consen 4 DLDGTLLNSDGKISPETIEALKELQEKGIKLVIATGRS-YSSIKRLLKELGIDDYFICSNGALIDDPK-GKILYEKPIDS 81 (254)
T ss_dssp ECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSST-HHHHHHHHHHTTHCSEEEEGGGTEEEETT-TEEEEEESB-H
T ss_pred EECCceecCCCeeCHHHHHHHHhhcccceEEEEEccCc-ccccccccccccchhhhcccccceeeecc-cccchhhheec
Confidence 55666644 34778889999999999999998443 34589999999999666542 12 111 11111111111
Q ss_pred C---------cCCCccceEEeecC----CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCc-eEE
Q psy8912 378 D---------SKIKYKDMVFFDDE----ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNC-LVA 443 (538)
Q Consensus 378 ~---------~~~~~~~l~~~Dld----h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gi-kla 443 (538)
+ .+.+ =.+.+++.+ +.+ ... ........... ......- ........+ ++.
T Consensus 82 ~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~ki~ 145 (254)
T PF08282_consen 82 DDVKKILKYLKEHN-ISFFFYTDDDIYIYEN-----KDE------EELFFEHKFFN-FKESIVS---EDDLEDEEIFKIL 145 (254)
T ss_dssp HHHHHHHHHHHHTT-CEEEEEESSEEEESST-----TCH------HHHHHHHHHTS-CEEEESH---HHHHHCSSESEEE
T ss_pred cchhheeehhhhcc-cccccccceeeecccc-----ccc------chhhhhhcccc-ccccccc---ccccccccceeee
Confidence 1 1111 333444433 121 000 00111111111 1111111 112223333 444
Q ss_pred EEeCCCchHHHHHHH----hhcCCc-cccc----cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccC
Q psy8912 444 AASRTTEMLRAHQLV----DLFNWN-QHFD----HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLG 512 (538)
Q Consensus 444 IASss~~~~~a~~~L----~~lgL~-~yFd----~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aG 512 (538)
.... ++....+. +.++-. .++. +.++.+. +|..-+.++++.+|++++++++|||+.||+.-.+.+|
T Consensus 146 -~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~ 222 (254)
T PF08282_consen 146 -FFPD--PEDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAG 222 (254)
T ss_dssp -EESC--HHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSS
T ss_pred -cccc--chhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcC
Confidence 2222 22333332 222211 1111 2234443 7888899999999999999999999999999999998
Q ss_pred CEEEEECCC
Q psy8912 513 VTCIHVKDG 521 (538)
Q Consensus 513 i~~i~V~dg 521 (538)
.. ++|.++
T Consensus 223 ~~-~am~na 230 (254)
T PF08282_consen 223 YS-VAMGNA 230 (254)
T ss_dssp EE-EEETTS
T ss_pred eE-EEEcCC
Confidence 76 556553
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG3040|consensus | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.073 Score=52.33 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=36.8
Q ss_pred HHHHHHHhCCCCCcEEEEecccc-cHHhHcccCCEEEEECCC
Q psy8912 481 FANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 481 ~~kal~~lgi~pee~l~~eDs~~-~I~aAk~aGi~~i~V~dg 521 (538)
|..+++.+|++|++|++|||-.+ |+..|.+.||.-|.|.-|
T Consensus 187 Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 187 FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 78999999999999999987655 599999999999999876
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.069 Score=58.53 Aligned_cols=100 Identities=16% Similarity=0.246 Sum_probs=66.0
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc---------CCccccccceeecCCchHH------------
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---------NWNQHFDHKEIFPGQKTTH------------ 480 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l---------gL~~yFd~~~i~~~~k~~~------------ 480 (538)
+..-|.+..+|+.||++|-++-++|+|+- +.+..+++.+ .+.+|||.+ |....||.-
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFDvV-Iv~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFDVV-IVDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCECEE-EES--CCHHHCT---EEEEET
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhheeEE-EEcCCCCcccCCCCceEEEEC
Confidence 33457899999999999999999999874 4777777663 467899942 222222222
Q ss_pred ------------------------HHHHHHHhCCCCCcEEEEeccccc-HHhHcc-cCCEEEEECCCCC
Q psy8912 481 ------------------------FANLKKATGIEYKDMVFFDDEERN-SHDVSP-LGVTCIHVKDGMS 523 (538)
Q Consensus 481 ------------------------~~kal~~lgi~pee~l~~eDs~~~-I~aAk~-aGi~~i~V~dg~t 523 (538)
.....+.+|....+++||||...+ |...++ .|-.+++|-..+.
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe 328 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE 328 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence 455666689999999999999765 666666 6999999976543
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.029 Score=64.67 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=69.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
.-.++|++.+.++.||++|+++.++|.-+ +..++.+-+.+||++|+- +..|.+|.+...++. -.-..+.||||
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn-~~~A~~iA~~lGId~v~A--ellPedK~~~V~~l~----~~g~~VamVGD 607 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDN-RRTAEAIAKELGIDEVRA--ELLPEDKAEIVRELQ----AEGRKVAMVGD 607 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcChHhhec--cCCcHHHHHHHHHHH----hcCCEEEEEeC
Confidence 34589999999999999999999999766 559999999999999887 567777877765553 23367999999
Q ss_pred ccccHHhHcccCC
Q psy8912 501 EERNSHDVSPLGV 513 (538)
Q Consensus 501 s~~~I~aAk~aGi 513 (538)
..||.-+-.+|-+
T Consensus 608 GINDAPALA~AdV 620 (713)
T COG2217 608 GINDAPALAAADV 620 (713)
T ss_pred CchhHHHHhhcCe
Confidence 9999766655443
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.089 Score=59.52 Aligned_cols=50 Identities=18% Similarity=0.291 Sum_probs=42.7
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|..-+..+++.+|+++++++.|||+.||++--+.+|. .|++.++
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~-gVAMgNA 551 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL-GVALSNG 551 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC-EEEeCCC
Confidence 45443 78888999999999999999999999999999999997 4666664
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.027 Score=56.69 Aligned_cols=37 Identities=11% Similarity=0.140 Sum_probs=31.4
Q ss_pred CCCcEEEEec----ccccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 491 EYKDMVFFDD----EERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 491 ~pee~l~~eD----s~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
+++|+++||| ..||++--+.-|+.++.|++....-+|
T Consensus 199 ~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~ 239 (245)
T PLN02423 199 DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQ 239 (245)
T ss_pred CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHH
Confidence 9999999999 799999999899999999985444333
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.024 Score=54.57 Aligned_cols=91 Identities=19% Similarity=0.256 Sum_probs=53.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCch------HHHHHHHh-hcCCccccccceeecCCchHHHHHHHHHhCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------LRAHQLVD-LFNWNQHFDHKEIFPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~------~~a~~~L~-~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~p 492 (538)
..+.+.||+.|+|+.|.+.|+.+-+.|+.+.+ +....-|+ +|+-..+ +. .+..+.|. .++.
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~-~~-~~~~~~K~--------~v~~-- 137 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY-DN-LIFTGDKT--------LVGG-- 137 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH-CC-EEEESSGG--------GC----
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch-he-EEEecCCC--------eEec--
Confidence 36789999999999999999666655555432 12223344 3342212 21 33444442 1222
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+ ++|||++.++.++..+|+.++......|.
T Consensus 138 D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr 167 (191)
T PF06941_consen 138 D--VLIDDRPHNLEQFANAGIPVILFDQPYNR 167 (191)
T ss_dssp S--EEEESSSHHHSS-SSESSEEEEE--GGGT
T ss_pred c--EEecCChHHHHhccCCCceEEEEcCCCCC
Confidence 2 89999999999999999999999775444
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.097 Score=52.44 Aligned_cols=138 Identities=11% Similarity=-0.002 Sum_probs=77.6
Q ss_pred CccceEEeecCCCCcCCCCCCccc---ccccccchHhhhc--CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchH--HH
Q psy8912 382 KYKDMVFFDDEERNARSISKLGVI---GIQVHRDKVLDAG--GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEML--RA 454 (538)
Q Consensus 382 ~~~~l~~~Dldh~~~s~~~p~~~i---~i~~~~~~i~d~~--~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a 454 (538)
.-++++|||+|.-=+|.+|-+..- +..+.. .-.+.+ ....+..|++.++++.|+++|+++.++|.-+... .+
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~-~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDP-TAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCH-HHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 467999999994333333311110 011111 112221 3356889999999999999999999999776431 25
Q ss_pred HHHHhhcCCccccccceeec---CCc-hHHHHHHHH-HhCCC-CCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 455 HQLVDLFNWNQHFDHKEIFP---GQK-TTHFANLKK-ATGIE-YKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 455 ~~~L~~lgL~~yFd~~~i~~---~~k-~~~~~kal~-~lgi~-pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
..-|+..|+..+ +....-+ ..+ ...|....+ ++--+ +.=+..|||...|+... -+|..+.-.|+.+
T Consensus 154 ~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~-~~~~RtFKLPNPm 225 (229)
T TIGR01675 154 LDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGS-PPGRRTFKLPNPM 225 (229)
T ss_pred HHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcCC-CccCceeeCCCCc
Confidence 567888887654 3111111 111 111222222 11111 22256699999998554 4677777766653
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.29 Score=56.08 Aligned_cols=208 Identities=15% Similarity=0.117 Sum_probs=106.6
Q ss_pred ccccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCcchhhhhhh
Q psy8912 301 KDRVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPAEKKIKHFA 373 (538)
Q Consensus 301 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 373 (538)
|=-+-|=+|||.+ .++.....+..|+++||++++||=-+.. .+..+++.|++...|++. -||-.... ..+
T Consensus 417 KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~-~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~--~~~ 493 (694)
T PRK14502 417 KIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMG-EQDLYRNELGIKDPFITENGGAIFIPKDY--FRL 493 (694)
T ss_pred eEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHcCCCCeEEEcCCCEEEECCCc--ccc
Confidence 3345689999987 6778889999999999999999744333 567888999987767653 23322110 001
Q ss_pred hcccCcCCCccceEEeecC-----------CCCcC---C---C-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHH
Q psy8912 374 NLKKDSKIKYKDMVFFDDE-----------ERNAR---S---I-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYL 435 (538)
Q Consensus 374 ~~~~~~~~~~~~l~~~Dld-----------h~~~s---~---~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~L 435 (538)
.+..+.......+...-++ ..+.. . . ..+.+. .+......+ ......+.+. .++.+
T Consensus 494 ~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~--~~~d~~~~e-i~~~TgL~~~---~a~~a 567 (694)
T PRK14502 494 PFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFIT--SFGDMSVED-VSRLTDLNLK---QAELA 567 (694)
T ss_pred cccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEe--cCCcccHHH-HHHhhCCCHH---HHHHH
Confidence 1111111111122222222 00110 0 0 001100 000000111 1111222211 23333
Q ss_pred H-HCCc-eEEEEeCCCchHHHHHHHhhcCCccccc--cceee-cCCchHHHHHHHHHhCCCCCcEEEE--ecccccHHhH
Q psy8912 436 K-QNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFD--HKEIF-PGQKTTHFANLKKATGIEYKDMVFF--DDEERNSHDV 508 (538)
Q Consensus 436 k-~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd--~~~i~-~~~k~~~~~kal~~lgi~pee~l~~--eDs~~~I~aA 508 (538)
+ .... |+.+......-+.....|+..++.-.+. +.++. ..+|..-...+++.+|++.++++.| ||+.||+.--
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisML 647 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSML 647 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHH
Confidence 3 2222 4433321111112333344445441111 11232 3478888999999999999999999 9999999999
Q ss_pred cccCCEEEE
Q psy8912 509 SPLGVTCIH 517 (538)
Q Consensus 509 k~aGi~~i~ 517 (538)
+.+|.-++.
T Consensus 648 e~Ag~gVAM 656 (694)
T PRK14502 648 ETVDSPILV 656 (694)
T ss_pred HhCCceEEE
Confidence 888885543
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.051 Score=55.67 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=54.8
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
.-.-+.|.++|||||.-=| .+ -+..-..-|.|.+-|.+||++|..+.+=|..+++ -+...
T Consensus 116 ~~~~~~phVIVfDlD~TLI------------------td-~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~e-HV~~s 175 (297)
T PF05152_consen 116 SLVWEPPHVIVFDLDSTLI------------------TD-EGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNRE-HVRHS 175 (297)
T ss_pred hccCCCCcEEEEECCCccc------------------cc-CCccccCChHHHHHHHHHHHcCCEEEEecCCCHH-HHHHH
Confidence 3566789999999993222 01 1111123478899999999999999999998865 78889
Q ss_pred HhhcCCcccccc
Q psy8912 458 VDLFNWNQHFDH 469 (538)
Q Consensus 458 L~~lgL~~yFd~ 469 (538)
|+.++|.+|||.
T Consensus 176 l~~~~L~~~Fd~ 187 (297)
T PF05152_consen 176 LKELKLEGYFDI 187 (297)
T ss_pred HHHhCCccccEE
Confidence 999999999993
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.16 Score=61.33 Aligned_cols=113 Identities=12% Similarity=-0.053 Sum_probs=76.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC---------cc-e---------------------e
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF---------SN-K---------------------E 103 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F---------d~-i---------------------e 103 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+..-. +. + .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~-~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFP-ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 4568999999999999999999999977 9999999999985210 00 0 1
Q ss_pred ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 104 IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 104 ~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++.+..|+.=..+.+.+.-..+-+.|+||+.+|..|-+.|++. |.+. .|.. . ....+|+++.++.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG-IAmg~~gt~--v-----ak~aADivl~dd~ 790 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG-IAMGINGSD--V-----AKDASDIVLSDDN 790 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc-EecCCCccH--H-----HHHhcCEEEecCC
Confidence 2333445432333333333345688999999999999999885 3343 3321 1 1235788887643
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.062 Score=62.41 Aligned_cols=85 Identities=12% Similarity=0.202 Sum_probs=67.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
-.+.|++...+..||+.|++++++|+-+. ..++.+.++.|++..+.. ..|..|.+.++.+.++- ..+.||||+
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~ae--v~P~~K~~~Ik~lq~~~----~~VaMVGDG 794 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYAE--VLPEQKAEKIKEIQKNG----GPVAMVGDG 794 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEec--cCchhhHHHHHHHHhcC----CcEEEEeCC
Confidence 34668999999999999999999999988 999999999995544433 56666777777765543 569999999
Q ss_pred cccHHHHhhcCC
Q psy8912 134 ERNSHDVSPLGV 145 (538)
Q Consensus 134 ~~DI~aAk~aG~ 145 (538)
.+|-.|-..+.+
T Consensus 795 INDaPALA~AdV 806 (951)
T KOG0207|consen 795 INDAPALAQADV 806 (951)
T ss_pred CCccHHHHhhcc
Confidence 999766666644
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.064 Score=53.12 Aligned_cols=59 Identities=20% Similarity=0.296 Sum_probs=45.8
Q ss_pred CCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
+|+.+|+.|+||||.++- ..+ ..+.+.+.+|++.|++|..+|+.+. .......+.+
T Consensus 5 ~~~~lIFtDlD~TLl~~~----------------------ye~-~pA~pv~~el~d~G~~Vi~~SSKT~-aE~~~l~~~l 60 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS----------------------YEW-QPAAPVLLELKDAGVPVILCSSKTR-AEMLYLQKSL 60 (274)
T ss_pred ccceEEEEcccCcccCCC----------------------CCC-CccchHHHHHHHcCCeEEEeccchH-HHHHHHHHhc
Confidence 467888889999998621 111 2256789999999999999999988 7777777888
Q ss_pred CCC
Q psy8912 94 NLN 96 (538)
Q Consensus 94 gL~ 96 (538)
|+.
T Consensus 61 ~v~ 63 (274)
T COG3769 61 GVQ 63 (274)
T ss_pred CCC
Confidence 775
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.022 Score=57.00 Aligned_cols=133 Identities=13% Similarity=0.110 Sum_probs=76.8
Q ss_pred CccceEEeecCCCCcCCCCCCcc---c-ccccccc---hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch--H
Q psy8912 382 KYKDMVFFDDEERNARSISKLGV---I-GIQVHRD---KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--L 452 (538)
Q Consensus 382 ~~~~l~~~Dldh~~~s~~~p~~~---i-~i~~~~~---~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~ 452 (538)
..|+.+|||+|.==+|. +||.. . +..+... ..+ ..+ .....||+.+++++++++|+++.+.|.-+.. +
T Consensus 70 ~~~~avv~DIDeTvLsn-~~y~~~~~~~~~~~~~~~w~~wv-~~~-~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSN-SPYYAYLIFGGESFSPEDWDEWV-ASG-KAPAIPGALELYNYARSRGVKVFFITGRPESQRE 146 (229)
T ss_dssp TSEEEEEEESBTTTEEH-HHHHHHHHHHTHHH-CCHHHHHH-HCT-GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHH
T ss_pred CCCcEEEEECCcccccC-HHHHHHHhhccCCCChHHHHHHH-hcc-cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHH
Confidence 78999999999321111 13310 0 0111111 111 122 2378899999999999999999999975543 2
Q ss_pred HHHHHHhhcCCcccccccee-ecC---------CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc---CCEEEEEC
Q psy8912 453 RAHQLVDLFNWNQHFDHKEI-FPG---------QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVK 519 (538)
Q Consensus 453 ~a~~~L~~lgL~~yFd~~~i-~~~---------~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a---Gi~~i~V~ 519 (538)
.+..-|+..|.... +.... ... .|.....++.++ |... +++|||...|+..++.. |..++-.|
T Consensus 147 ~T~~nL~~~G~~~~-~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-Gy~I--i~~iGD~~~D~~~~~~~~~~~~r~f~lP 222 (229)
T PF03767_consen 147 ATEKNLKKAGFPGW-DHLILRPDKDPSKKSAVEYKSERRKEIEKK-GYRI--IANIGDQLSDFSGAKTAGARAERWFKLP 222 (229)
T ss_dssp HHHHHHHHHTTSTB-SCGEEEEESSTSS------SHHHHHHHHHT-TEEE--EEEEESSGGGCHCTHHHHHHHTTEEE-T
T ss_pred HHHHHHHHcCCCcc-chhccccccccccccccccchHHHHHHHHc-CCcE--EEEeCCCHHHhhcccccccccceEEEcC
Confidence 45566888886432 21111 111 144444444343 4333 78899999999985543 45666666
Q ss_pred CC
Q psy8912 520 DG 521 (538)
Q Consensus 520 dg 521 (538)
+.
T Consensus 223 Np 224 (229)
T PF03767_consen 223 NP 224 (229)
T ss_dssp TS
T ss_pred CC
Confidence 53
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.13 Score=59.26 Aligned_cols=86 Identities=12% Similarity=0.084 Sum_probs=66.1
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEeccc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 502 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~ 502 (538)
.++||+.+.+++|++.|+++.++|.-+ +..++.+-+.+|+.++|- ...+.+|.+ ++++++-.-+-+.|+||..
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn-~~TA~aIA~elGId~v~A--~~~PedK~~----iV~~lQ~~G~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDN-PLTAAAIAAEAGVDDFLA--EATPEDKLA----LIRQEQAEGRLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCcEEEc--cCCHHHHHH----HHHHHHHcCCeEEEECCCc
Confidence 579999999999999999999999765 669999999999987765 233333333 3334433345588999999
Q ss_pred ccHHhHcccCCEE
Q psy8912 503 RNSHDVSPLGVTC 515 (538)
Q Consensus 503 ~~I~aAk~aGi~~ 515 (538)
||.-|-++|.+-+
T Consensus 518 NDAPALa~ADVGI 530 (679)
T PRK01122 518 NDAPALAQADVGV 530 (679)
T ss_pred chHHHHHhCCEeE
Confidence 9999988887654
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.13 Score=59.08 Aligned_cols=87 Identities=9% Similarity=0.031 Sum_probs=67.3
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-+++||+.+.+++||+.|+++.+.|.-+ +..+..+-+.+|+.++|- .. .|+.=.+++++++-.-+-+.|+||.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn-~~TA~aIA~elGI~~v~A--~~----~PedK~~iV~~lQ~~G~~VaMtGDG 512 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDN-ELTAATIAKEAGVDRFVA--EC----KPEDKINVIREEQAKGHIVAMTGDG 512 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCceEEc--CC----CHHHHHHHHHHHHhCCCEEEEECCC
Confidence 4689999999999999999999999765 669999999999988775 23 3334333344444334568899999
Q ss_pred cccHHhHcccCCEE
Q psy8912 502 ERNSHDVSPLGVTC 515 (538)
Q Consensus 502 ~~~I~aAk~aGi~~ 515 (538)
.||.-|-++|.+-+
T Consensus 513 vNDAPALa~ADVGI 526 (673)
T PRK14010 513 TNDAPALAEANVGL 526 (673)
T ss_pred hhhHHHHHhCCEEE
Confidence 99999999887643
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.3 Score=49.16 Aligned_cols=125 Identities=17% Similarity=0.136 Sum_probs=76.4
Q ss_pred CcCCCccceEEeecC--CCCcCCCCCCcccc-ccccc---chHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch
Q psy8912 378 DSKIKYKDMVFFDDE--ERNARSISKLGVIG-IQVHR---DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM 451 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld--h~~~s~~~p~~~i~-i~~~~---~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~ 451 (538)
..+.+.| .||+||| -+|.|.--.|.+.- ..+.+ +.-++. ....+-||+.|||++.-++|.++--.|+-.++
T Consensus 74 ~~k~K~~-aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a--~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~ 150 (274)
T COG2503 74 KKKGKKK-AVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQA--KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQE 150 (274)
T ss_pred cccCCCc-eEEEecchHhhcCccccchhhhcCCCCCccchHHHHhh--cccccCccHHHHHHHHHhcCcEEEEEeccchh
Confidence 3556666 9999999 34443222222210 01101 122222 24678899999999999999999999966543
Q ss_pred H---HHHHHHhhcCCccccccceeec---CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHc
Q psy8912 452 L---RAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS 509 (538)
Q Consensus 452 ~---~a~~~L~~lgL~~yFd~~~i~~---~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk 509 (538)
. -...-|+.+||..--....+.- ..|..++...-+ ..+=+++|||...|+.+..
T Consensus 151 ~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 151 NEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred cccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccceeeEecCchhhhcchh
Confidence 2 2445688888876544222222 245555555544 4556889999999976543
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.23 Score=59.24 Aligned_cols=118 Identities=11% Similarity=0.005 Sum_probs=78.9
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc---ce--------------------eecCCCCH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS---NK--------------------EIYPGQKT 110 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd---~i--------------------e~~~~~Kp 110 (538)
-+|.|++.++++.|+++|+++.++|+-.. ..+..+.+..|+..--. .+ .++.+-.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~-~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHV-ETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCH-HHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 45779999999999999999999999977 99999999999753221 11 11222245
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhh
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEH 179 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~ 179 (538)
+.=..+.+.+.-.-.-+.|.||+.||+.|-++|.+.......|.. .. .+.+|++..++.-..
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtd--aa-----k~Aadivl~dd~~~~ 686 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD--AA-----KEAADIVLLDDNFAT 686 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHH--HH-----HhhcceEeecCcHHH
Confidence 332333333333345788999999999999999887544433332 11 123677776654333
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.33 Score=58.50 Aligned_cols=115 Identities=11% Similarity=0.027 Sum_probs=76.1
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc------------------------ce--------
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS------------------------NK-------- 102 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd------------------------~i-------- 102 (538)
++.|++.+.++.|+++|+++.++|+... ..+..+.+.+|+..--. .+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~-~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 4568999999999999999999999977 88999999998832100 00
Q ss_pred ---------------eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCC
Q psy8912 103 ---------------EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGID 166 (538)
Q Consensus 103 ---------------e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~ 166 (538)
.++.+..|+.=..+.+.+.-...-+.|+||+.+|+.|-++|.+. |.+. .|. +.. ..
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVG-iamg~~G~--~va-----k~ 718 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG-VAMGIAGS--DVS-----KQ 718 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcc-eecCCccc--HHH-----HH
Confidence 03333455432333333332335688999999999999999875 2232 222 211 23
Q ss_pred CCCEEEeCCchh
Q psy8912 167 YKDMIYFDDEQE 178 (538)
Q Consensus 167 ~~d~Ii~d~~~~ 178 (538)
.+|+++.++.-.
T Consensus 719 aADivL~dd~f~ 730 (997)
T TIGR01106 719 AADMILLDDNFA 730 (997)
T ss_pred hhceEEecCCHH
Confidence 578888775433
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG2470|consensus | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.05 Score=56.99 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=66.9
Q ss_pred CCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---CCCCCCcceeecCCCCHH----------------------
Q psy8912 57 YRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYPGQKTT---------------------- 111 (538)
Q Consensus 57 ~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---gL~~~Fd~ie~~~~~Kp~---------------------- 111 (538)
.|...++|..|++.|.++.++||++. ..+..-+..+ .|.++||.+ +....||+
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPy-sFVd~GM~flvG~~WRdlFDVV-IvqA~KP~Fftde~rPfR~~dek~~sl~wd 319 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPY-SFVDKGMRFLVGDDWRDLFDVV-IVQANKPEFFTDERRPFRKYDEKRGSLLWD 319 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCch-hhhhcCceeeeCccHHhhhhee-EEecCCCcccccccCcchhhcccccchhhh
Confidence 46678999999999999999999988 7777655544 345778865 21111110
Q ss_pred --------------HHHHHHHHcCCCCCcEEEEeCCc-ccHHHHh-hcCCeEEEEC
Q psy8912 112 --------------HFESLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCIHSW 151 (538)
Q Consensus 112 --------------~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk-~aG~~tI~V~ 151 (538)
.....++..|....+++++||.. +|+..-. +.|+++-++-
T Consensus 320 kv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 320 KVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 14555677788889999999996 5877766 7898876553
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.068 Score=57.02 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=41.1
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
.+|++|+||||.+-- .......+.|++.+.|++|. +|++++|+|+++. ..+...+
T Consensus 112 ~llflD~DGTL~Piv-----------------~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~-~~l~~~~ 166 (366)
T PLN03017 112 IVMFLDYDGTLSPIV-----------------DDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCI-DKVYNFV 166 (366)
T ss_pred eEEEEecCCcCcCCc-----------------CCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCH-HHHHHhh
Confidence 567789999998410 01223467789999999999 7799999999988 6666553
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.26 Score=54.57 Aligned_cols=83 Identities=16% Similarity=0.111 Sum_probs=63.0
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
-.+.|++.+.++.|++.|+++.++|+... ..+..+-+.+|+ | ....|+--..+.+++.-....+.|+||.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~-~~a~~ia~~lgi---~------~~~~p~~K~~~v~~l~~~g~~v~~vGDg 415 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNV-LTAKAIAKELGI---F------ARVTPEEKAALVEALQKKGRVVAMTGDG 415 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCc---e------eccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 36779999999999999999999999988 889999999986 1 2234433223333332233679999999
Q ss_pred cccHHHHhhcCCe
Q psy8912 134 ERNSHDVSPLGVT 146 (538)
Q Consensus 134 ~~DI~aAk~aG~~ 146 (538)
.+|..+-+.+++.
T Consensus 416 ~nD~~al~~Advg 428 (499)
T TIGR01494 416 VNDAPALKKADVG 428 (499)
T ss_pred hhhHHHHHhCCCc
Confidence 9999999888764
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.077 Score=56.40 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=42.6
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
.++++|+||||.+-- .......+-|++.+.|+.|.+ +.+++|+|+.+. ..+...+.
T Consensus 99 ~ll~lDyDGTL~PIv-----------------~~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR~~-~~l~~~~~ 154 (354)
T PLN02151 99 IVMFLDYDGTLSPIV-----------------DDPDRAFMSKKMRNTVRKLAK-CFPTAIVSGRCR-EKVSSFVK 154 (354)
T ss_pred eEEEEecCccCCCCC-----------------CCcccccCCHHHHHHHHHHhc-CCCEEEEECCCH-HHHHHHcC
Confidence 578889999997510 113455678999999999994 579999999988 66666654
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.35 Score=48.75 Aligned_cols=85 Identities=14% Similarity=0.164 Sum_probs=63.7
Q ss_pred ceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCC---CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 72 ikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~---~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
..-++||++.- ..+-..+=.+++..+|..-.++.. .|...|+.+.+++|-+...-++|||+...-.+|+..+++++
T Consensus 176 ~vNvLVTs~qL-VPaLaKcLLy~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 176 CINVLVTSGQL-IPSLAKCLLFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred eeEEEEEcCcc-HHHHHHHHHhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 34566776655 222233335677888886555554 46789999999999988999999999999999999999999
Q ss_pred EECCCCCch
Q psy8912 149 HSWLMMSSG 157 (538)
Q Consensus 149 ~V~~G~~~~ 157 (538)
-+.......
T Consensus 255 ~I~~h~Dl~ 263 (274)
T TIGR01658 255 KIDLHPDSS 263 (274)
T ss_pred EeecCCCHH
Confidence 997655443
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.32 Score=56.35 Aligned_cols=123 Identities=12% Similarity=0.083 Sum_probs=83.9
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-------------Ccce------------eecCCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-------------FSNK------------EIYPGQ 108 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-------------Fd~i------------e~~~~~ 108 (538)
-.|.|++.+.++.|++.|+++.++|+-.. ..+..+.+..|+... ||.. ..+.+.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~-~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNK-ETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 45779999999999999999999999988 999999999997533 2221 011122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCCCCCEEEeCC-chhhHHhhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGIDYKDMIYFDD-EQEHVNDISK 185 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~~~d~Ii~d~-~~~~~~~i~~ 185 (538)
.|..=.++.+.++-.-+=+.|-||+.+|-.|-+.|.+. |+.. .|.. ...+.+|+|..|+ -.-++..+++
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG-IAMG~~GTd-------VaKeAsDMVL~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG-IAMGISGTD-------VAKEASDMVLADDNFSTIVAAVEE 732 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc-eeecCCccH-------hhHhhhhcEEecCcHHHHHHHHHH
Confidence 34444444444444455688999999999999999875 3343 4442 2233568888764 4445555554
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.094 Score=56.34 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=43.6
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
.+++||+||||-+-- .......+-|++.++|+.|.+. .+++|+|+.+. ..++..+..
T Consensus 120 ~~LfLDyDGTLaPIv-----------------~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~-~~L~~~l~~ 176 (384)
T PLN02580 120 IALFLDYDGTLSPIV-----------------DDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSR-DKVYELVGL 176 (384)
T ss_pred eEEEEecCCccCCCC-----------------CCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCH-HHHHHHhCC
Confidence 577789999996510 1234566788999999999988 58999999988 777766643
|
|
| >KOG1618|consensus | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.12 Score=53.76 Aligned_cols=102 Identities=19% Similarity=0.237 Sum_probs=67.4
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC----CceEEEEcCCCcH---HHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN----KCLVAAASRTSEI---LHAKQI 89 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~----GikiaIvTn~~~p---~~~~~~ 89 (538)
=++.||+||||+. .-++.|++.++|+.|.+. .++...+||+... ..++.+
T Consensus 36 fgfafDIDGVL~R-----------------------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l 92 (389)
T KOG1618|consen 36 FGFAFDIDGVLFR-----------------------GHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL 92 (389)
T ss_pred eeEEEecccEEEe-----------------------cCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH
Confidence 4799999999986 668999999999999988 7999999997541 334444
Q ss_pred HHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 90 LNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 90 L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
-+.+|.. .+.-.+..+. .+|+... ....++++++|+... -.-|+..|++.|.
T Consensus 93 S~~Lgv~--Vs~dqviqSH--sP~r~l~---~~~~k~vLv~G~~~v-r~vAegyGFk~Vv 144 (389)
T KOG1618|consen 93 SALLGVE--VSADQVIQSH--SPFRLLV---EYHYKRVLVVGQGSV-REVAEGYGFKNVV 144 (389)
T ss_pred HHhhCCc--cCHHHHHhhc--ChHHHHh---hhhhceEEEecCCcH-HHHhhccCcccee
Confidence 4555532 1110111111 2344444 234578999996543 3567778887653
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.69 Score=46.62 Aligned_cols=46 Identities=13% Similarity=0.034 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
.|......+++++++++++++++|||.+|+.+- ..+..+|.|.+..
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 578899999999999999999999999999888 7778888887643
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.3 Score=57.06 Aligned_cols=99 Identities=9% Similarity=0.032 Sum_probs=70.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc-cccc-----------------------eeecCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-FDHK-----------------------EIFPGQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y-Fd~~-----------------------~i~~~~ 476 (538)
.-+++|++.+.++.|++.|+++.+.|.-+ +..++.+-+.+||.+- +... .++.+-
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVTGDH-LAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 34689999999999999999999999765 5689999999999641 1100 022223
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.|+.=.++++.++-.-+-+.|+||..||.-|-++|.+- |++..|
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~g 562 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGA 562 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCC
Confidence 34443444555554556789999999999999998766 344444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.29 Score=46.61 Aligned_cols=96 Identities=14% Similarity=0.099 Sum_probs=62.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC-CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDD 132 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~-~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGD 132 (538)
..+-.++...|..++++ .+++.+|.... ...+..-+.+... ..|+.+++.+.... -.+.+..++ -+|++|
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~-dl~~iT~~~l~~q~ih~~~l~i~g~h~K---V~~vrth~i----dlf~ed 141 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITARKA-DLTRITYAWLFIQNIHYDHLEIVGLHHK---VEAVRTHNI----DLFFED 141 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehhhH-HHHHHHHHHHHHhccchhhhhhhccccc---chhhHhhcc----Cccccc
Confidence 44557788889999887 66777777644 3333332222221 34666555544322 345666666 578999
Q ss_pred Cc-ccHHHHhhcCCeEEEECCCCCchH
Q psy8912 133 EE-RNSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 133 s~-~DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
+. +-++.|+++|++.+++.+.++...
T Consensus 142 ~~~na~~iAk~~~~~vilins~ynRkp 168 (194)
T COG5663 142 SHDNAGQIAKNAGIPVILINSPYNRKP 168 (194)
T ss_pred cCchHHHHHHhcCCcEEEecCcccccc
Confidence 95 458889999999999987765433
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.28 Score=54.08 Aligned_cols=95 Identities=11% Similarity=0.095 Sum_probs=74.4
Q ss_pred cCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcc
Q psy8912 56 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEER 135 (538)
Q Consensus 56 l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~ 135 (538)
+-||++|-+.+||+.|++...+|+-+. -.+..+.+..|++++.-. .+|+--....++.+-.-.=+.|.||..+
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~-~TAa~IA~EAGVDdfiAe------atPEdK~~~I~~eQ~~grlVAMtGDGTN 520 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFIAE------ATPEDKLALIRQEQAEGRLVAMTGDGTN 520 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHhCchhhhhc------CChHHHHHHHHHHHhcCcEEEEcCCCCC
Confidence 459999999999999999999999876 888999999998765544 5675545555665656667889999999
Q ss_pred cHHHHhhcCCeEEEECCCCCchH
Q psy8912 136 NSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 136 DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
|-.+-.++.+. +..++|.+...
T Consensus 521 DAPALAqAdVg-~AMNsGTqAAk 542 (681)
T COG2216 521 DAPALAQADVG-VAMNSGTQAAK 542 (681)
T ss_pred cchhhhhcchh-hhhccccHHHH
Confidence 98888887763 45777765443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.43 Score=56.71 Aligned_cols=98 Identities=9% Similarity=0.024 Sum_probs=69.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccc-----------------cceeecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFD-----------------HKEIFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd-----------------~~~i~~~~k~~~~~ 482 (538)
-+++|++.+.+++|++.|+++.+.|.-+ +..+..+-+.+||.. ... ...++.+-.|+.=.
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~-~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDN-EIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 4689999999999999999999999765 568999999999961 100 00222333344434
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+.++-.-+-+.|+||..||.-|-++|.+-+. +..|
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIA-mg~g 630 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGIS-VDTA 630 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEE-eCCc
Confidence 4444444444578899999999999999887654 4344
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.25 Score=42.91 Aligned_cols=86 Identities=12% Similarity=0.070 Sum_probs=48.5
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchH--HHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEML--RAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
-.++||+.|+|++|+++|.++.++|+++... ....-|+.+|+. ++..++.+...+ ....+++. .....+.+++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~--~~~~~i~ts~~~--~~~~l~~~-~~~~~v~vlG 87 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP--VDEDEIITSGMA--AAEYLKEH-KGGKKVYVLG 87 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGGEEEHHHH--HHHHHHHH-TTSSEEEEES
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC--CCcCEEEChHHH--HHHHHHhc-CCCCEEEEEc
Confidence 3478999999999999999999999886442 233346888876 232245444221 11222221 2345566666
Q ss_pred cccccHHhHcccCC
Q psy8912 500 DEERNSHDVSPLGV 513 (538)
Q Consensus 500 Ds~~~I~aAk~aGi 513 (538)
-. .-.+..+.+|+
T Consensus 88 ~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 88 SD-GLREELREAGF 100 (101)
T ss_dssp -H-HHHHHHHHTTE
T ss_pred CH-HHHHHHHHcCC
Confidence 43 33344555554
|
... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.88 Score=45.49 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=32.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
...++-||+.+.++.|.++ +.-+|+|.+-. .++......+|+
T Consensus 80 ~sa~lvPgA~etm~~l~~~-~tp~v~STSY~-qy~~r~a~~ig~ 121 (315)
T COG4030 80 LSAKLVPGAEETMATLQER-WTPVVISTSYT-QYLRRTASMIGV 121 (315)
T ss_pred hhcccCCChHHHHHHHhcc-CCceEEeccHH-HHHHHHHHhcCC
Confidence 3477899999999999988 55566665546 777777777776
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.82 Score=45.71 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=41.1
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc-------CCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a-------Gi~~i~V~dg 521 (538)
+|...+.++++++++++++++||||+.+|+.+.+.+ |...+.|.+|
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence 577889999999999999999999999999999988 7888888544
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.67 Score=47.17 Aligned_cols=127 Identities=15% Similarity=0.096 Sum_probs=72.2
Q ss_pred EEEeCCCCCChhhHhhhh--chhHHHH--HHHHhhhcCCCccCCCHHHHHHHhhhC------CceEEEEcCCCcHH--HH
Q psy8912 19 VVFDLDYTLWPLHVHDLV--APFKKIG--QKVMDAKGTLIKYYRGVPEILRYLKEN------KCLVAAASRTSEIL--HA 86 (538)
Q Consensus 19 VIFDlDGTLw~~~~~~~i--~~~~~~~--~~i~~~~~~~~~l~pgv~elL~~Lk~~------GikiaIvTn~~~p~--~~ 86 (538)
|.||-|+||....-.... .++.... +.-.........|+......|.+|+++ -+++++||..+.|. .+
T Consensus 124 IAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~Rv 203 (264)
T PF06189_consen 124 IAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERV 203 (264)
T ss_pred EEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHH
Confidence 799999999765533222 2221111 000011122233444455556666553 48899999887753 33
Q ss_pred HHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 87 KQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
-..|+.+|+. .|..-..++-....++++. + -=+|++|....++.|. .++.+.+|.+|..
T Consensus 204 I~TLr~Wgv~--vDEafFLgG~~K~~vL~~~---~----phIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 204 IRTLRSWGVR--VDEAFFLGGLPKGPVLKAF---R----PHIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred HHHHHHcCCc--HhHHHHhCCCchhHHHHhh---C----CCEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 3445566653 2221112332223333332 2 2489999999999998 7999999998864
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.52 Score=56.49 Aligned_cols=94 Identities=7% Similarity=-0.049 Sum_probs=68.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc---------cc------------cceeecCCchH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH---------FD------------HKEIFPGQKTT 479 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y---------Fd------------~~~i~~~~k~~ 479 (538)
+-+++|++.+.++.|++.|+++.++|.-+ +..|..+-+.+||.+- |+ ...++.+-.|+
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe 655 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDN-IDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL 655 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence 34789999999999999999999999765 5689999999999621 11 01233444455
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.=.++++.++-.-+-+.++||..||.-|-++|.+-+
T Consensus 656 ~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGI 691 (941)
T TIGR01517 656 DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGF 691 (941)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcce
Confidence 534444444444456899999999999999876544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG2134|consensus | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.31 Score=51.97 Aligned_cols=109 Identities=20% Similarity=0.193 Sum_probs=65.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhh-cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH----------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAK-GTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---------- 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~-~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---------- 83 (538)
.-|.+.||+||||.+.--...+ ... .+-.-++|.+..=|+.|.+.|+.++|.||...+
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf-----------~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f 142 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVF-----------PKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEF 142 (422)
T ss_pred CcceEEEecCCceeecCCccee-----------eccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHH
Confidence 3578999999999553211111 001 112347788889999999999999999997553
Q ss_pred -HHHHHHHHHcCCC-CCCcceeecCCCCH--HHHHHHHHHcC----CCCCcEEEEeCCc
Q psy8912 84 -LHAKQILNLINLN-QYFSNKEIYPGQKT--THFESLKKATG----IEYKDMVFFDDEE 134 (538)
Q Consensus 84 -~~~~~~L~~lgL~-~~Fd~ie~~~~~Kp--~~f~~ale~lg----i~P~e~L~IGDs~ 134 (538)
..+..+.+.+++. ..+..+-...-.|| .++....+..+ +.-..+.|+||..
T Consensus 143 ~~Ki~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaa 201 (422)
T KOG2134|consen 143 KKKIKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAA 201 (422)
T ss_pred HHHHHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhc
Confidence 3344555555543 12222111112466 66666665543 4445666888853
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.19 Score=48.36 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=38.2
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+|...+..++++++++++++++|||+.+|+..++.+|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 78888999999999999999999999999999999998764
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.47 Score=56.60 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=67.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--c-----cc------------cceeecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--H-----FD------------HKEIFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--y-----Fd------------~~~i~~~~k~~~~~ 482 (538)
-+++|++.+.+++|++.|+++-+.|.-+ +..+..+-+.+||.. . ++ ...++.+-.|++=.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDS-ELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 4689999999999999999999999765 568999999999961 0 00 00123333444444
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
++.+.++-.-+-+.|+||..||.-|-++|.+-.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGI 660 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGI 660 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEE
Confidence 445555444566889999999999999877654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.31 E-value=0.41 Score=49.71 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc
Q psy8912 425 YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF 467 (538)
Q Consensus 425 ~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF 467 (538)
++-+.+.|++|+++|+++.+||+.... .+..+.+.+++..+|
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~-ev~~l~~~Lgl~~p~ 61 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRA-QLEHLCRQLRLEHPF 61 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHhCCCCeE
Confidence 345788999999999999999999765 667789999987544
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=91.23 E-value=1.7 Score=40.81 Aligned_cols=92 Identities=10% Similarity=0.064 Sum_probs=53.3
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHH---HHHHhh-----cCCcc--ccc--cceee--c----CCch-----H
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRA---HQLVDL-----FNWNQ--HFD--HKEIF--P----GQKT-----T 479 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a---~~~L~~-----lgL~~--yFd--~~~i~--~----~~k~-----~ 479 (538)
.+.|++.++++.|+++|+++.++|+.+.. .+ +..|+. .++.. .+- ...+. . ..++ +
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~-~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIG-QADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHH-HHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 35799999999999999999999988643 33 356766 22321 110 00000 0 0112 1
Q ss_pred HHHHHHHHhCCCCCcE-EEEecccccHHhHcccCCEE
Q psy8912 480 HFANLKKATGIEYKDM-VFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 480 ~~~kal~~lgi~pee~-l~~eDs~~~I~aAk~aGi~~ 515 (538)
....+.+.+.-.-... +.|||+..|+++=+++|+..
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 1233322222111223 34899999999988898864
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=91.08 E-value=2 Score=47.93 Aligned_cols=90 Identities=8% Similarity=-0.005 Sum_probs=54.0
Q ss_pred cCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCCCCcce-ee---------cCCC---C-HHHHHHHHHHc
Q psy8912 56 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNK-EI---------YPGQ---K-TTHFESLKKAT 120 (538)
Q Consensus 56 l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~~Fd~i-e~---------~~~~---K-p~~f~~ale~l 120 (538)
+.|.+.+ .+++.|.. +|+|.+++ .+++..++. +|++...... +. ..+. . .+-...+.+.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~-~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPR-IMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcH-HHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence 3444444 45567764 99999988 899999976 7876432111 11 0111 1 12233333556
Q ss_pred CCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 121 GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 121 gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
|.+... +..||+.+|...-..++-. +.|+.
T Consensus 186 g~~~~~-~aYgDS~sD~plL~~a~e~-y~V~~ 215 (497)
T PLN02177 186 GDALPD-LGLGDRETDHDFMSICKEG-YMVPR 215 (497)
T ss_pred CCCCce-EEEECCccHHHHHHhCCcc-EEeCC
Confidence 654444 8999999999988877754 44543
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.07 E-value=1.2 Score=45.85 Aligned_cols=98 Identities=4% Similarity=-0.053 Sum_probs=61.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchH--HHHHHHhhcCCccccccceeecC-----CchHHHHHH----HHHhC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEML--RAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANL----KKATG 489 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~ka----l~~lg 489 (538)
..+..||+.+++++|+++|+++.++|+-.+.. .+..-|+..|...+ +..-.-+. ...-.|+.. +.+-|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eG 221 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEG 221 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcC
Confidence 56788999999999999999999999776432 35556778787543 21111111 111123312 12223
Q ss_pred CCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 490 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 490 i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
. .=...|||...|+......+-.+.-.|+.
T Consensus 222 Y--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 222 Y--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred c--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 3 22577999999996555333577777775
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=90.25 E-value=0.99 Score=54.81 Aligned_cols=41 Identities=12% Similarity=0.115 Sum_probs=37.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 96 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~ 96 (538)
++-|++.+.++.|+++|+++.++|+-+. ..+..+.+..|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~-~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNP-LTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence 4779999999999999999999999977 8899999999983
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=90.20 E-value=0.85 Score=54.44 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=69.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--cc-----c------------cceeecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HF-----D------------HKEIFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yF-----d------------~~~i~~~~k~~~~~ 482 (538)
-+++|++.+.+++|++.|+++-+.|.-+ +..+..+-+.+||.. .. + ...++.+-.|++=.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDN-PIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 4689999999999999999999999765 668999999999961 00 0 00122333444434
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++++.++-.-+-+.|+||..||.-|-++|.+- |++..|
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~g 665 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSG 665 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcc
Confidence 44555544445688999999999999998775 345444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=89.69 E-value=1.2 Score=49.48 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=61.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
+-.++|++.+++++|++.|+++.++|.-+ +..+..+-+.+|+ |- ...+..|.+.. +++.-....+.+++|
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~-~~~a~~ia~~lgi---~~--~~~p~~K~~~v----~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDN-VLTAKAIAKELGI---FA--RVTPEEKAALV----EALQKKGRVVAMTGD 414 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCc---ee--ccCHHHHHHHH----HHHHHCCCEEEEECC
Confidence 45689999999999999999999999876 4588888888887 11 12222333333 333223367999999
Q ss_pred ccccHHhHcccCCE
Q psy8912 501 EERNSHDVSPLGVT 514 (538)
Q Consensus 501 s~~~I~aAk~aGi~ 514 (538)
..||..+-++|++-
T Consensus 415 g~nD~~al~~Advg 428 (499)
T TIGR01494 415 GVNDAPALKKADVG 428 (499)
T ss_pred ChhhHHHHHhCCCc
Confidence 99999888887643
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.97 Score=54.83 Aligned_cols=94 Identities=10% Similarity=-0.055 Sum_probs=67.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc-c--------cc----------------------c
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-F--------DH----------------------K 470 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y-F--------d~----------------------~ 470 (538)
-+++|++.+.++.|++.|+++.++|.-+ +..+..+-+.+||.+- + +. .
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDF-PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 3689999999999999999999999765 5689999999999531 0 00 0
Q ss_pred eeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 471 EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 471 ~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
.++.+-.|++=.++++.++-.-+-+.++||..||.-+-++|.+-+.
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEe
Confidence 1222223334334444454445678899999999999999876553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.46 E-value=0.51 Score=48.37 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=44.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~ 91 (538)
..++++||+||||.+.. .......+.+++.++|+.|.++ ...++|+|+.+. ..++..+.
T Consensus 17 ~~~~~~lDyDGTl~~i~-----------------~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~-~~l~~~~~ 76 (266)
T COG1877 17 RKRLLFLDYDGTLTEIV-----------------PHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL-AELERLFG 76 (266)
T ss_pred cceEEEEeccccccccc-----------------cCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHhcC
Confidence 45899999999995411 1233566788999999999988 445999999977 66666655
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=89.34 E-value=1.3 Score=53.53 Aligned_cols=94 Identities=9% Similarity=-0.004 Sum_probs=66.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc----------------------------c-----
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF----------------------------D----- 468 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF----------------------------d----- 468 (538)
-+++|+|.+.++.|+++|+++.++|.-+ +..+..+.+.+|+.+-- +
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDH-PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 3689999999999999999999999776 55889999999984210 0
Q ss_pred -------------cc-eeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 469 -------------HK-EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 469 -------------~~-~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
.. .++.+-.|++=.++.+.++-.-.-+.++||..||+.+-++|.+-+.
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 00 0223333444333444444334568899999999999999876553
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=89.28 E-value=1.3 Score=48.25 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=41.7
Q ss_pred CchHHHHHHHHHh---CCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~l---gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|..-+..+++++ |++++++++|||+.||++--+.+|+..|+|.++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 6888888898998 999999999999999999999999888888774
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=89.26 E-value=0.91 Score=53.16 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=63.5
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
+-+-.++||+...++.||+.|++..+.|.-+. .-|+.+-++.|+.+-|. +..+.+|.++++++.+ ...-+.+|
T Consensus 719 ~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~a--ev~P~~K~~~Ik~lq~----~~~~VaMV 791 (951)
T KOG0207|consen 719 ALEDQVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYA--EVLPEQKAEKIKEIQK----NGGPVAMV 791 (951)
T ss_pred EeccccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEe--ccCchhhHHHHHHHHh----cCCcEEEE
Confidence 33456899999999999999999999998764 48899999999666555 4556667776665543 33668999
Q ss_pred ecccccHHh
Q psy8912 499 DDEERNSHD 507 (538)
Q Consensus 499 eDs~~~I~a 507 (538)
||..||--|
T Consensus 792 GDGINDaPA 800 (951)
T KOG0207|consen 792 GDGINDAPA 800 (951)
T ss_pred eCCCCccHH
Confidence 999999444
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.19 E-value=2 Score=44.97 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=67.1
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHH---HHHHHHc
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHA---KQILNLI 93 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~---~~~L~~l 93 (538)
.+|=|+|.|+..+++.... +..++.++ -+...-.++|||..+.+.|.+.| .++.-+||++- ... ++.+...
T Consensus 163 giISDiDDTV~~T~V~~~~---r~~~~s~~-l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw-~~f~~L~efi~~~ 237 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGP---RKAGRSLL-LHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPW-QLFPTLQEFITNR 237 (373)
T ss_pred eeeeccccceEecccccch---HHHHHHhh-hcccccCCCCCHHHHHHHHHhcCCCCeEEecCChh-HhHHHHHHHHhcC
Confidence 4788999999554432211 11111111 12445679999999999999998 89999999854 222 2222222
Q ss_pred CCC----------CCCcce-eecCCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHH
Q psy8912 94 NLN----------QYFSNK-EIYPGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHD 139 (538)
Q Consensus 94 gL~----------~~Fd~i-e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~a 139 (538)
++. ..|+.+ +.....|-.....++.++. -...+.|||+ ..|.+.
T Consensus 238 ~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p--~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 238 NFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYP--DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred CCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhCC--CceEEEecCCCCcCHHH
Confidence 221 234443 1122235556666666553 3678889998 457543
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.89 Score=46.07 Aligned_cols=114 Identities=12% Similarity=0.152 Sum_probs=62.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc----------cccc-ceeec-CCchHH-HHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ----------HFDH-KEIFP-GQKTTH-FANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~----------yFd~-~~i~~-~~k~~~-~~kal~~ 487 (538)
.+.|++|+.++++.|+++++|+-|.|+.- .+.++.+|++.|... .||. ..+.. .++.-| |.|--..
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 48899999999999999999999999875 679999999986431 2330 01100 011111 2111111
Q ss_pred h-------CC-CCCcEEEEecccccHHhHcccC--CEEEEECCCCCHHHHHHHHHHHHhc
Q psy8912 488 T-------GI-EYKDMVFFDDEERNSHDVSPLG--VTCIHVKDGMSHSVLHKGLKQWASK 537 (538)
Q Consensus 488 l-------gi-~pee~l~~eDs~~~I~aAk~aG--i~~i~V~dg~t~~~~~~~l~~~~~~ 537 (538)
+ .+ ...++|..||+..|+.-|.-.. -.++-| |+=.+..++.|+.|.+.
T Consensus 167 l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkI--GFLn~~ve~~l~~Y~~~ 224 (246)
T PF05822_consen 167 LEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKI--GFLNDKVEENLEKYLEA 224 (246)
T ss_dssp HTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEE--EEE-SSHHHHHHHHHCC
T ss_pred ccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEE--EecccCHHHHHHHHHhc
Confidence 1 22 4568999999999988876542 122222 33334456667777653
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG3189|consensus | Back alignment and domain information |
|---|
Probab=88.72 E-value=0.64 Score=45.54 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=43.4
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC--C
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN--L 95 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg--L 95 (538)
+++||.||||.+ ......|.+.++|+.||++ +.++++-++.- ....+++| +
T Consensus 13 l~lfdvdgtLt~----------------------~r~~~~~e~~~~l~~lr~~-v~ig~VggsDl----~k~~eqlG~~V 65 (252)
T KOG3189|consen 13 LCLFDVDGTLTP----------------------PRQKVTPEMLEFLQKLRKK-VTIGFVGGSDL----SKQQEQLGDNV 65 (252)
T ss_pred EEEEecCCcccc----------------------ccccCCHHHHHHHHHHhhh-eEEEEeecHHH----HHHHHHhchhH
Confidence 789999999975 2456788999999999988 88999988744 44445554 2
Q ss_pred CCCCcce
Q psy8912 96 NQYFSNK 102 (538)
Q Consensus 96 ~~~Fd~i 102 (538)
.+.||+.
T Consensus 66 l~~fDY~ 72 (252)
T KOG3189|consen 66 LEEFDYV 72 (252)
T ss_pred Hhhhccc
Confidence 3566654
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.10 E-value=0.88 Score=43.90 Aligned_cols=92 Identities=11% Similarity=0.143 Sum_probs=61.2
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCch---HHHHHHHhhcCCccccccceeecCCchHH--HHH--HHHHhCCCCCcEE
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEM---LRAHQLVDLFNWNQHFDHKEIFPGQKTTH--FAN--LKKATGIEYKDMV 496 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~---~~a~~~L~~lgL~~yFd~~~i~~~~k~~~--~~k--al~~lgi~pee~l 496 (538)
++.-+++++.--.++|=.+...|....- .....+-+.|+|.+.-- .++.++|++. |.+ .++.- .--|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~p--v~f~Gdk~k~~qy~Kt~~i~~~----~~~I 188 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNP--VIFAGDKPKPGQYTKTQWIQDK----NIRI 188 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcc--eeeccCCCCcccccccHHHHhc----CceE
Confidence 3444666666667899999998865432 13344456678766554 4566665533 332 23333 3468
Q ss_pred EEecccccHHhHcccCCEEEEECCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+.|||.+||.|||.+|+.-|.+-..
T Consensus 189 hYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 189 HYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred EecCCchhhhHHHhcCccceeEEec
Confidence 9999999999999999998887553
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.5 Score=53.24 Aligned_cols=41 Identities=22% Similarity=0.165 Sum_probs=35.4
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
-++.||+.+.++.|+++|++++++|+-.. +.+..+....|+
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~-~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKV-ETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCC
Confidence 35779999999999999999999999866 777777777765
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG2882|consensus | Back alignment and domain information |
|---|
Probab=87.11 E-value=1.1 Score=46.35 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=44.0
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECCCCCHH
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+...++..++++.+++|++|+||||+. .||.=+++.|++++.|-.|.+..
T Consensus 225 P~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~l 275 (306)
T KOG2882|consen 225 PSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTL 275 (306)
T ss_pred CCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcH
Confidence 445568899999999999999999995 68999999999999999987744
|
|
| >KOG3107|consensus | Back alignment and domain information |
|---|
Probab=86.09 E-value=3.6 Score=43.98 Aligned_cols=90 Identities=19% Similarity=0.206 Sum_probs=62.6
Q ss_pred CceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCC---CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 71 KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQ---KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 71 GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~---Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
++.-+++|+..- ...-..+-.+||...|..-.++... |-..|+++.+++|- ...-++|||+...-.+|++..|.+
T Consensus 370 ncvnVlvTttqL-ipalaKvLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf 447 (468)
T KOG3107|consen 370 NCVNVLVTTTQL-IPALAKVLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF 447 (468)
T ss_pred ceeEEEEeccch-hHHHHHHHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence 445667777654 2233333345777777754455544 45789999999997 566778999999999999999999
Q ss_pred EEECCCCCchHhHHh
Q psy8912 148 IHSWLMMSSGRLKEA 162 (538)
Q Consensus 148 I~V~~G~~~~~~~~~ 162 (538)
+-+...........+
T Consensus 448 wrI~~h~Dl~~l~~a 462 (468)
T KOG3107|consen 448 WRISSHSDLDALYSA 462 (468)
T ss_pred EeeccCccHHHHhhh
Confidence 988765544443333
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=85.98 E-value=0.54 Score=46.69 Aligned_cols=46 Identities=28% Similarity=0.209 Sum_probs=27.3
Q ss_pred EEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCc
Q psy8912 20 VFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSE 82 (538)
Q Consensus 20 IFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~ 82 (538)
+||+||||-+.. .......+.|++.++|+.|.+. +..++|+|+.+.
T Consensus 1 ~lDyDGTL~p~~-----------------~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~ 47 (235)
T PF02358_consen 1 FLDYDGTLAPIV-----------------DDPDAAVPPPELRELLRALAADPNNTVAIVSGRSL 47 (235)
T ss_dssp EEE-TTTSS--------------------S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-H
T ss_pred CcccCCccCCCC-----------------CCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCH
Confidence 689999996521 1133456788999999999976 447999999977
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=85.27 E-value=2 Score=43.79 Aligned_cols=91 Identities=16% Similarity=0.100 Sum_probs=58.0
Q ss_pred CCccCCC-HHHHHHHH---HH------CCceEEEEeCCCchHH--HHHHHhhcCCc---cccccceeecCCchHHHHHHH
Q psy8912 421 IIKYYRD-VPAILKYL---KQ------NNCLVAAASRTTEMLR--AHQLVDLFNWN---QHFDHKEIFPGQKTTHFANLK 485 (538)
Q Consensus 421 ~v~l~pG-v~e~L~~L---k~------~GiklaIASss~~~~~--a~~~L~~lgL~---~yFd~~~i~~~~k~~~~~kal 485 (538)
..++-+| ...+|..| ++ .=+++|++|+.+.+.- +..-|+.-|+. -+|- +.-+|.. ++++.
T Consensus 158 ~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFL----gG~~K~~-vL~~~ 232 (264)
T PF06189_consen 158 DKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFL----GGLPKGP-VLKAF 232 (264)
T ss_pred cCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHh----CCCchhH-HHHhh
Confidence 3555555 55555555 33 3468999998887743 33335555543 1222 2223433 34433
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
.| =|||||...+++.|. .++.++.||+|.+.
T Consensus 233 -----~p--hIFFDDQ~~H~~~a~-~~vps~hVP~gv~n 263 (264)
T PF06189_consen 233 -----RP--HIFFDDQDGHLESAS-KVVPSGHVPYGVAN 263 (264)
T ss_pred -----CC--CEeecCchhhhhHhh-cCCCEEeccCCcCC
Confidence 23 499999999999999 99999999999764
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG1605|consensus | Back alignment and domain information |
|---|
Probab=84.83 E-value=0.15 Score=51.95 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=80.3
Q ss_pred CceEEEeCCCCCChhhH--hhhh-chhHHHHHHHHhh--hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHV--HDLV-APFKKIGQKVMDA--KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~--~~~i-~~~~~~~~~i~~~--~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
-|++++|+|+||..... .... +.+.- .-..+. +.-.+.-.|++-++|...-+. +.+.+.|.+.. ..+..++
T Consensus 89 kk~lVLDLDeTLvHss~~~~~~~~~d~~~--~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~-~Ya~~v~ 164 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSSLNLKPIVNADFTV--PVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLE-VYADPLL 164 (262)
T ss_pred CceEEEeCCCcccccccccCCCCCcceee--eeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhH-HHHHHHH
Confidence 48999999999955431 1100 00000 000011 122345569999999999887 88999999878 8999999
Q ss_pred HHcCC-CCCCcce--eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 91 NLINL-NQYFSNK--EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 91 ~~lgL-~~~Fd~i--e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
..+.- ...|... ...+-.++..|.+-+..+|-+.++++.|+|++.-...=-+.|+.
T Consensus 165 D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIp 223 (262)
T KOG1605|consen 165 DILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIP 223 (262)
T ss_pred HHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCc
Confidence 88874 3333322 01111233334444466777889999999999877666677776
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=84.39 E-value=4.7 Score=40.59 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccH
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNS 505 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I 505 (538)
+.++-+.|+++|+.+-+..|+. .++| +.+. +|..-...+++++++++++++++|||-||+
T Consensus 133 ~~~i~~~l~~~~l~~~~i~s~~---------------~~ld---ilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~ 194 (247)
T PF05116_consen 133 LEEIRARLRQRGLRVNVIYSNG---------------RDLD---ILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDL 194 (247)
T ss_dssp HHHHHHHHHCCTCEEEEEECTC---------------CEEE---EEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGH
T ss_pred HHHHHHHHHHcCCCeeEEEccc---------------eeEE---EccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcH
Confidence 3444445667788776664432 2344 4443 788889999999999999999999999998
Q ss_pred HhHcccCCEEEEECCC
Q psy8912 506 HDVSPLGVTCIHVKDG 521 (538)
Q Consensus 506 ~aAk~aGi~~i~V~dg 521 (538)
.-- ..+...|.|.+.
T Consensus 195 ~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 195 EML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHH-CCSSEEEE-TTS
T ss_pred HHH-cCcCCEEEEcCC
Confidence 776 788888888774
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.98 E-value=1.3 Score=52.13 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=44.4
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~ 92 (538)
-++++||+||||.+..-.. .......+.|++.++|+.|.+. +..|+|+|+.+. ..++..+..
T Consensus 507 ~rll~LDyDGTL~~~~~~~--------------~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~-~~L~~~~~~ 569 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQ--------------IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGK-DILDKNFGE 569 (797)
T ss_pred CeEEEEecCccccCCCCCc--------------cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCH-HHHHHHhCC
Confidence 3689999999997511000 0012356778999999999875 788999999987 777776643
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=83.67 E-value=0.72 Score=46.76 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=53.5
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHH
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILE 277 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
.+++.||++|. +|++.+ .|...+..+|.++-+-.+ |+..+. ++.|+.-||++.+|++++-++++.
T Consensus 78 ~~ak~iLEiGT~~GySal-~la~al~~~g~v~tiE~~-~~~~~~-Ar~~~~~ag~~~~I~~~~G~a~e~ 143 (247)
T PLN02589 78 INAKNTMEIGVYTGYSLL-ATALALPEDGKILAMDIN-RENYEL-GLPVIQKAGVAHKIDFREGPALPV 143 (247)
T ss_pred hCCCEEEEEeChhhHHHH-HHHhhCCCCCEEEEEeCC-HHHHHH-HHHHHHHCCCCCceEEEeccHHHH
Confidence 56889999999 999865 466677778988877776 566665 999999999999999999988764
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.61 E-value=1.3 Score=52.89 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=44.3
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~l 93 (538)
-++++||+||||.+..-. |. .. ...+ ......+.|++.++|+.|.+. +..|+|+|+.+. ..++..+...
T Consensus 591 ~RLlfLDyDGTLap~~~~---P~-~~-~~~~---~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~-~~Le~~fg~~ 660 (934)
T PLN03064 591 NRLLILGFNATLTEPVDT---PG-RR-GDQI---KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDR-SVLDENFGEF 660 (934)
T ss_pred ceEEEEecCceeccCCCC---cc-cc-cccc---cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCH-HHHHHHhCCC
Confidence 468999999999652100 00 00 0000 011345778899999999875 788999999988 7776666443
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.98 E-value=3.5 Score=45.11 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=71.8
Q ss_pred CccCCC--HHHHHHHhhhCCceEEEEcCCCcH-HHHHHHHHHcCCCCCCcceee-------cCCCCHHHHHHHHHHcCCC
Q psy8912 54 IKYYRG--VPEILRYLKENKCLVAAASRTSEI-LHAKQILNLINLNQYFSNKEI-------YPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 54 ~~l~pg--v~elL~~Lk~~GikiaIvTn~~~p-~~~~~~L~~lgL~~~Fd~ie~-------~~~~Kp~~f~~ale~lgi~ 123 (538)
..++|. ..++.+.+.+.|.+|.++|.---| ...+..|...|.+ |..+.+ ..+.....|..+++.-+++
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d--~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPD--FNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCC--ccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 345554 679999999999999999985433 6778888888743 222211 1122237899999999999
Q ss_pred CCcEEEEeCCcc-cHHHHhhcCCeEEEE
Q psy8912 124 YKDMVFFDDEER-NSHDVSPLGVTCIHS 150 (538)
Q Consensus 124 P~e~L~IGDs~~-DI~aAk~aG~~tI~V 150 (538)
|...+.+||... |...++++|+.+...
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred hhheEEecCchhhhhcCccccchhHHHH
Confidence 999999999965 999999999987544
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=82.56 E-value=0.76 Score=45.26 Aligned_cols=65 Identities=12% Similarity=0.260 Sum_probs=51.4
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHH
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILE 277 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
.+++.||++|. .|++.++ |...+.++|.++=.-. -|+..+. ++.|+.-||++.+|++++.++++.
T Consensus 44 ~~~k~vLEIGt~~GySal~-la~~l~~~g~i~tiE~-~~~~~~~-A~~~~~~ag~~~~I~~~~gda~~~ 109 (205)
T PF01596_consen 44 TRPKRVLEIGTFTGYSALW-LAEALPEDGKITTIEI-DPERAEI-ARENFRKAGLDDRIEVIEGDALEV 109 (205)
T ss_dssp HT-SEEEEESTTTSHHHHH-HHHTSTTTSEEEEEES-SHHHHHH-HHHHHHHTTGGGGEEEEES-HHHH
T ss_pred cCCceEEEeccccccHHHH-HHHhhcccceEEEecC-cHHHHHH-HHHHHHhcCCCCcEEEEEeccHhh
Confidence 68999999999 9999664 5566777888776655 4666665 899999999999999999999864
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=81.43 E-value=5.9 Score=40.18 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=57.1
Q ss_pred hcCCccccccceeecC---CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 460 LFNWNQHFDHKEIFPG---QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 460 ~lgL~~yFd~~~i~~~---~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
.++|..+|....+++. +|..-|.++.+++|-+...-++|||..--.+||+..++.++-|.-..+....
T Consensus 195 Ly~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl~~l 265 (274)
T TIGR01658 195 LFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDSSHR 265 (274)
T ss_pred HhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCHHHh
Confidence 3688899997778877 4555599999999998889999999999999999999999998776555443
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 538 | ||||
| 2wm8_A | 187 | Crystal Structure Of Human Magnesium-Dependent Phos | 8e-35 | ||
| 2wm8_A | 187 | Crystal Structure Of Human Magnesium-Dependent Phos | 2e-28 | ||
| 1u7o_A | 164 | Magnesium Dependent Phosphatase 1 (Mdp-1) Length = | 7e-34 | ||
| 1u7o_A | 164 | Magnesium Dependent Phosphatase 1 (Mdp-1) Length = | 7e-28 |
| >pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) Length = 187 | Back alignment and structure |
|
| >pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) Length = 187 | Back alignment and structure |
|
| >pdb|1U7O|A Chain A, Magnesium Dependent Phosphatase 1 (Mdp-1) Length = 164 | Back alignment and structure |
|
| >pdb|1U7O|A Chain A, Magnesium Dependent Phosphatase 1 (Mdp-1) Length = 164 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 1e-39
Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 5 SNSLDPSVKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPE 62
N S+ + PK+ VFDLDYTLWP V V PF K V D +G ++ Y VPE
Sbjct: 16 ENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPE 75
Query: 63 ILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGI 122
+L+ L+ AAASRTSEI A Q+L L +L +YF ++EIYPG K THFE L++ TGI
Sbjct: 76 VLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGI 135
Query: 123 EYKDMVFFDDEERNSHDVSPLGVTCIH 149
+ M+FFDDE RN DVS LGVTCIH
Sbjct: 136 PFSQMIFFDDERRNIVDVSKLGVTCIH 162
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 2e-33
Identities = 59/136 (43%), Positives = 87/136 (63%)
Query: 402 LGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 461
+ + V D G ++ Y +VP +LK L+ AAASRT+E+ A+QL++LF
Sbjct: 47 VDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF 106
Query: 462 NWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521
+ ++F H+EI+PG K THF L++ TGI + M+FFDDE RN DVS LGVTCIH+++G
Sbjct: 107 DLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNG 166
Query: 522 MSHSVLHKGLKQWASK 537
M+ L +GL+ +A
Sbjct: 167 MNLQTLSQGLETFAKA 182
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 1e-24
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 297 KHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDF 356
V D +G + LY ++PE++K L+ + A ASRT I A LL L L +
Sbjct: 52 HKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY 111
Query: 357 FDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQV 409
F ++EI+P KI HF L++ + I + M+FFDDE RN +SKLGV I +
Sbjct: 112 FVHREIYP-GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHI 163
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 2e-10
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 232 VLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILEMIGVARYFDHKEIY 291
V D G ++ Y +VP +L+ L+ + AA S T I +LE+ + RYF H+EIY
Sbjct: 59 VRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY 118
Query: 292 PRQKTKHLKK 301
P K H ++
Sbjct: 119 PGSKITHFER 128
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 1e-05
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 171 IYFDDEQEHVNDISKLGVTATRKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVMHSMT 230
IY + H + ++ + I + M+FFDDE RN +SKLGV I + + M
Sbjct: 117 IYPGSKITHFERL--------QQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMN 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 2e-08
Identities = 82/568 (14%), Positives = 157/568 (27%), Gaps = 144/568 (25%)
Query: 1 MSPQSNSLDPSVKK----FPKMVVFDLDYTLWPLHVHDLVAP-FKK------IGQK---- 45
M ++ K F V + D V D+ K I K
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCK----DVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 46 -------VMDAKGTLIKYYRGVPEILR----YLKENKCLVAAASRTSEILHAKQILNLIN 94
+ +K + + V E+LR +L ++ +Q L N
Sbjct: 63 GTLRLFWTLLSKQEEM-VQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121
Query: 95 LNQYFSNKEIYPGQK----TTHFESLKKATGIEYKDM-----------VFFDDEERNSHD 139
NQ F+ + Q L+ A + + V +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV---QC 178
Query: 140 VSPLGVTCIHSWLMMSSGRLKEATGI-DYKDMIYFDDEQEHVNDISKLGVTATRKDSKIK 198
+ WL + + + + + + + R S
Sbjct: 179 KMDFKI----FWL--NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 199 YKDMVFFDDEERNARSISKLGVIGIQVMHSMTNVLDSNGMVIKYYQDVP-RILEYLREHN 257
+ N L V + NV ++ + ++ +IL R
Sbjct: 233 ELRRLLKSKPYENC-----LLV--------LLNVQNAK--AWNAF-NLSCKILLTTRFKQ 276
Query: 258 I---LVAAVSTTVRILHVQNIL---EMIGV-ARYFDHKEIYPRQKTKHLKKDRVEDAKGT 310
+ L AA +T + + H L E+ + +Y D + + E
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP----------QDLPREVLTTN 326
Query: 311 LLNL------YRDIPEIVKYLKDHNI-KLALASRTVHIRNAYSLLHLLGLSDFFDYKEIF 363
L RD K N KL I ++ ++L FD +F
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTI-----IESSLNVLEPAEYRKMFDRLSVF 381
Query: 364 PAEKKIKHFANLKKDSKIKYK--DMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAI 421
P + I +++FD + + + ++H+ +++
Sbjct: 382 P------------PSAHIPTILLSLIWFDVIKSDVMVVVN------KLHKYSLVEKQPKE 423
Query: 422 IKYYRDVPAI-LKYLKQNNCLVAAASRTTEMLRAHQ-LVDLFNWNQHFDHKEIFPGQKTT 479
+P+I L+ + H+ +VD +N + FD ++ P
Sbjct: 424 STIS--IPSIYLELKVKLE----------NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 480 HFAN-----LKKATGIEYKDM---VFFD 499
+F + LK E + VF D
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVFLD 499
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 4e-06
Identities = 60/407 (14%), Positives = 124/407 (30%), Gaps = 107/407 (26%)
Query: 29 PLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGV--PEILRYLKENKCLVAAASRTSEILHA 86
L +H + A +++ + L+ V + C + +R
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLV--LLNVQNAKAWNAF-NLSCKILLTTRF------ 274
Query: 87 KQILNLINLNQYFSNKEIYPGQKTTHFESLK---KATGIEYKDMVFFDDEERNSHDVSPL 143
KQ+ + ++ + T E K D R +P
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR------PQDLPREVLTTNPR 328
Query: 144 GVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDIS--KLGVTATRKDSKIKYKD 201
++ I + G AT ++K D+ + + S L RK +
Sbjct: 329 RLSII--AESIRDGL---ATWDNWKH--VNCDKLTTIIESSLNVLEPAEYRK----MFDR 377
Query: 202 MVFFDDEERNARSISKLGVIGI-------QVMHSMTNVLDSNGMVIKYYQD----VPRIL 250
+ F I ++ + + + N L +V K ++ +P I
Sbjct: 378 LSVFPPSAH----IP-TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
Query: 251 EYLREHNILVAAVSTTVRILHVQNILEMIGVARYFDHKEIYPRQKTK--------HLKK- 301
L+ A LH ++I++ + + FD ++ P + HLK
Sbjct: 433 LELKVKLENEYA-------LH-RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 302 ---DRVE------------DAK-----------GTLLNLYRDIPEIVKYLKDHN------ 329
+R+ + K G++LN + + Y+ D++
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERL 544
Query: 330 ----IKLALASRTVHIRNAYS-LLHLLGLSDFFDYKEIF-PAEKKIK 370
+ I + Y+ LL + L + + IF A K+++
Sbjct: 545 VNAILDFLPKIEENLICSKYTDLLR-IAL--MAEDEAIFEEAHKQVQ 588
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 272 VQNILEMIGVARYFDHKEIYPRQKTKHLKKDRVED--AKGTLLNLYRDIPEIVKYLKDHN 329
+++IL G + + E Q+ H K + +K T +L I ++ LK+ N
Sbjct: 52 LESILIFGGAETKYTNAEK---QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNEN 108
Query: 330 IKLALASRTVHIRNAYSLLHLLGLSDFFDY 359
IK+ LAS + RNA +L L + D F
Sbjct: 109 IKIGLASSS---RNAPKILRRLAIIDDFHA 135
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 272 VQNILEMIGVARYFDHKEIYPRQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIK 331
+Q IL++ + + ++K + K ++D ++Y I +++K L+ + IK
Sbjct: 53 LQKILDLADKKVSAEEFKELAKRKNDNYVK-MIQDVSP--ADVYPGILQLLKDLRSNKIK 109
Query: 332 LALASRTVHIRNAYSLLHLLGLSDFFDY 359
+ALAS + +N LL + L+ +FD
Sbjct: 110 IALASAS---KNGPFLLERMNLTGYFDA 134
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 272 VQNILEMIGVARYFDHKEIYPRQKTKHLKKDRVED--AKGTLLNLYRDIPEIVKYLKDHN 329
++ IL+ G F+ +E + + K + T+ + I ++ L+
Sbjct: 55 LRRILQHGGKEGDFNSQER---AQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQ 111
Query: 330 IKLALASRTVHIRNAYSLLHLLGLSDFFDY 359
I + LAS + NA ++L L L +FF +
Sbjct: 112 ISVGLASVS---LNAPTILAALELREFFTF 138
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 293 RQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLG 352
+++ K++ K + D+ +++ +K +++ LAS + + + L
Sbjct: 72 QEEYNTYKQNNPLPYKELIFP---DVLKVLNEVKSQGLEIGLASSS-VKADIFRALEENR 127
Query: 353 LSDFFDY 359
L FFD
Sbjct: 128 LQGFFDI 134
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 275 ILEMIG-----VARYFDHKEIYP---RQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLK 326
+ + +G V + ++ + RQ+ R L + E V K
Sbjct: 48 LPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCK 107
Query: 327 DHNIKLALASRTVHIRNAYSLLHLLGLSDFFD 358
+ + + LAS + +L + L D FD
Sbjct: 108 EQGLLVGLASASPL-HMLEKVLTMFDLRDSFD 138
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 9/93 (9%)
Query: 275 ILEMIGVARYFDHKEIYPRQKTKHLKKDRVEDAKGTLLNLYRDIPEI---------VKYL 325
G ++ R+ K ++ +E L+ PE ++ +
Sbjct: 62 AYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKV 121
Query: 326 KDHNIKLALASRTVHIRNAYSLLHLLGLSDFFD 358
K + + + + + L H +
Sbjct: 122 KSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKE 154
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 8/117 (6%)
Query: 301 KDRVEDAKGTLLNLYRDIP---EIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFF 357
+ + D G L D ++ K + + + S A + L +
Sbjct: 3 RGLIVDYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAA-PIRELETNGVV 61
Query: 358 DYKEIFPAEKKIK----HFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVH 410
D + K F + +D V DD N R + G++G+
Sbjct: 62 DKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ 118
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 8/111 (7%)
Query: 311 LLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFP--AEKK 368
+ L ++ I+ L++ ++ + S T + + + D D+ I+
Sbjct: 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADH--IYLSQDLGM 146
Query: 369 IKH----FANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVL 415
K + ++ + D VFFDD N ++LG+ I V +
Sbjct: 147 RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.88 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.85 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.85 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.84 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.84 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.82 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.82 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.81 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.81 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.8 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.8 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.8 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.8 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.79 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.79 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.79 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.79 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.79 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.79 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.79 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.78 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.78 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.78 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.78 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.78 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.78 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.78 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.78 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.77 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.77 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.77 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.77 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.76 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.76 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.76 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.76 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.75 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.75 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.75 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.75 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.74 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.74 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.74 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.74 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.73 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.73 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.73 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.73 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.72 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.72 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.72 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.72 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.72 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.71 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.71 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.71 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.71 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.7 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.7 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.7 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.69 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.69 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.68 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.68 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.67 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.66 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.66 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.66 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.66 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.65 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.64 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.64 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.63 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.63 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.63 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.62 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.62 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.61 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.61 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.61 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.6 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.6 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.59 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.59 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.59 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.58 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.58 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.58 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.57 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.57 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.56 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.56 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.56 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.56 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.55 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.55 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.55 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.54 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.53 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.53 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.52 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.52 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.52 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.51 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.51 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.5 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.5 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.5 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.5 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.5 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.5 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.5 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.49 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.48 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.48 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.48 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.47 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.47 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.46 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.46 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.46 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.44 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.44 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.44 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.43 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.43 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.43 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.42 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.42 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.42 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.41 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.41 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.41 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.41 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.41 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.4 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.4 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.4 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.4 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.4 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.4 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.4 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.39 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.39 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.39 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.39 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.39 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.38 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.38 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.38 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.37 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.37 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.37 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.36 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.35 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.35 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.35 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.35 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.35 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.35 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.34 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.33 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.33 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.33 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.33 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.32 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.32 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.32 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.31 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.3 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.3 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.3 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.3 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.3 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.28 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.27 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.27 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.27 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.27 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.25 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.25 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.25 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.24 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.24 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.24 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.23 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.23 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.23 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.22 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.22 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.22 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.22 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.22 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 98.85 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.21 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.2 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.2 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.2 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.19 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.18 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.18 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.18 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.18 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.18 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.17 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.17 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.17 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.15 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.15 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.15 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.14 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.14 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.14 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.13 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.11 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.11 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.1 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.09 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.07 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.07 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.07 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.07 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.05 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.04 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.03 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.98 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.95 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 98.95 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.95 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 98.46 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.9 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.89 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.87 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.85 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.81 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.8 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.77 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.68 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.66 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.65 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 98.64 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.63 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.63 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.61 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.59 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.56 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.55 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.52 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.52 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.5 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.49 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.44 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.4 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.39 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.37 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.34 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.3 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.28 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.27 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.24 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.1 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.1 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.08 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.07 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.04 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.02 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.96 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 97.91 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 97.86 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.84 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.83 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.75 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.75 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.74 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.74 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 97.65 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.65 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.62 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.58 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.56 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.56 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.52 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.5 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 97.31 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.31 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.23 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.21 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.16 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.15 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.07 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.04 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.84 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 96.75 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 96.57 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.55 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 96.53 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 96.35 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.29 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.27 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.26 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.16 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 95.98 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 95.74 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.74 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 95.61 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.5 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 94.92 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 94.33 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 94.03 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 93.22 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 92.79 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 92.34 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 92.26 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 91.83 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 91.72 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 90.52 | |
| 3cvo_A | 202 | Methyltransferase-like protein of unknown functio; | 82.56 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 81.88 |
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-23 Score=194.08 Aligned_cols=150 Identities=49% Similarity=0.795 Sum_probs=125.2
Q ss_pred cCCCCceEEEeCCCCCChhhHhhhh-chhHHHH-HHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC-cHHHHHH
Q psy8912 12 VKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-EILHAKQ 88 (538)
Q Consensus 12 m~~~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~-~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~-~p~~~~~ 88 (538)
|..++|+|+||+|||||+.++.... +++.... ..+++.......++||+.++|+.|+++|++++|+||++ . ..++.
T Consensus 23 m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~-~~~~~ 101 (187)
T 2wm8_A 23 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEI-EGANQ 101 (187)
T ss_dssp HHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCH-HHHHH
T ss_pred HHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCCh-HHHHH
Confidence 4456899999999999987766555 4433222 12223334567899999999999999999999999998 6 88899
Q ss_pred HHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 89 ILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 89 ~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
.++.+|+..+|+.+...+++||+.|..+++++|++|++|+||||+.+|+.+|+++|+.+++|.+|.....+.+.
T Consensus 102 ~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~ 175 (187)
T 2wm8_A 102 LLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQG 175 (187)
T ss_dssp HHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHH
T ss_pred HHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHH
Confidence 99999999999987667788999999999999999999999999999999999999999999999876655443
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-21 Score=186.45 Aligned_cols=118 Identities=14% Similarity=0.174 Sum_probs=98.0
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eec--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIY--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++++.|+++|++++++||+.. ....++.+|+.++|+.+ +.. ++++|++|..+++++|++|++|
T Consensus 93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 346899999999999999999999999866 67789999999999987 222 3455699999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhh
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDIS 184 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~ 184 (538)
+||||+..|+++|+++||++|+|.+|.. .+|.++++..+..++.+.
T Consensus 170 l~VgDs~~di~aA~~aG~~~I~V~~g~~-----------~ad~~~~~~~~l~~~~l~ 215 (243)
T 4g9b_A 170 IGIEDAQAGIDAINASGMRSVGIGAGLT-----------GAQLLLPSTESLTWPRLS 215 (243)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESTTCC-----------SCSEEESSGGGCCHHHHH
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCC-----------cHHHhcCChhhcCHHHHH
Confidence 9999999999999999999999998864 345566655544444333
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=182.65 Aligned_cols=128 Identities=18% Similarity=0.232 Sum_probs=104.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eec--CCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIY--PGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~--~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..+...++.+|+.++|+.+ +.. ++++|++|..+++++|++|+
T Consensus 80 ~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~-~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~ 158 (216)
T 3kbb_A 80 SELLKENPGVREALEFVKSKRIKLALATSTPQ-REALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPE 158 (216)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred HHhcccCccHHHHHHHHHHcCCCcccccCCcH-HHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence 34467899999999999999999999999988 8999999999999999976 222 34556999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEE-ECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhh
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIH-SWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDIS 184 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~-V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~ 184 (538)
+|+||||+..|+++|+++||++|+ +.+|....+.+.. ..++.+... .++++.++
T Consensus 159 e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~---~~~~~i~~~--~eli~~l~ 213 (216)
T 3kbb_A 159 KVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLE---AGAVALVKP--EEILNVLK 213 (216)
T ss_dssp GEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHH---TTCSEEECG--GGHHHHHH
T ss_pred ceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHh---CCCcEECCH--HHHHHHHH
Confidence 999999999999999999999984 8888877666554 345555532 34444443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=183.63 Aligned_cols=122 Identities=12% Similarity=0.123 Sum_probs=100.3
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++++.|+++|++++++|++.. +...++.+|+.++|+.+ +.. ++++|++|..+++++|++|++
T Consensus 113 ~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~---~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 189 (250)
T 4gib_A 113 TSNDILPGIESLLIDVKSNNIKIGLSSASKN---AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQN 189 (250)
T ss_dssp CGGGSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGG
T ss_pred cccccchhHHHHHHHHHhcccccccccccch---hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHH
Confidence 3456899999999999999999999888755 67789999999999987 222 345569999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
|+||||+..|+++|+++||.+|+|.+... + ..+|+++.+..+..++.+.+
T Consensus 190 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-------~--~~ad~vi~~l~eL~~~~i~~ 239 (250)
T 4gib_A 190 CIGIEDASAGIDAINSANMFSVGVGNYEN-------L--KKANLVVDSTNQLKFEYIQE 239 (250)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEESCTTT-------T--TTSSEEESSGGGCCHHHHHH
T ss_pred eEEECCCHHHHHHHHHcCCEEEEECChhH-------h--ccCCEEECChHhCCHHHHHH
Confidence 99999999999999999999999964321 1 25799998877665555543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=179.02 Aligned_cols=120 Identities=8% Similarity=0.050 Sum_probs=102.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeec---CCCCHHHHHHHHHHcCCCCCcEEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---PGQKTTHFESLKKATGIEYKDMVF 129 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~---~~~Kp~~f~~ale~lgi~P~e~L~ 129 (538)
...++||+.++|+.|++ |++++++||++. ..++..++.+|+..+|+.+... ++++|++|+.+++++|++|++|++
T Consensus 82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~ 159 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSS-SYPLYITTTKDT-STAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp SCEECTTHHHHHHHHHT-TSCEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHc-CCeEEEEeCCCH-HHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEE
Confidence 46789999999999999 999999999987 8889999999999999986322 245678999999999999999999
Q ss_pred EeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 130 FDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 130 IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|||+.+|+++|+++|+.+|+|.+|....... ....+++++.+..+
T Consensus 160 vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l---~~~~a~~v~~~~~e 204 (210)
T 2ah5_A 160 IGDTKFDMLGARETGIQKLAITWGFGEQADL---LNYQPDYIAHKPLE 204 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHH---HTTCCSEEESSTTH
T ss_pred ECCCHHHHHHHHHCCCcEEEEcCCCCCHHHH---HhCCCCEEECCHHH
Confidence 9999999999999999999999987644433 23457888876543
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=172.91 Aligned_cols=150 Identities=41% Similarity=0.670 Sum_probs=125.2
Q ss_pred cceEEeecC-CC----CcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 384 KDMVFFDDE-ER----NARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 384 ~~l~~~Dld-h~----~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
+.+++||+| -. -...+ +|+... ....+.+.+.....++||+.++|++|+++|++++|+|+++....++..
T Consensus 27 ~k~vifDlDGTL~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~ 102 (187)
T 2wm8_A 27 PKLAVFDLDYTLWPFWVDTHVDPPFHKS----SDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQL 102 (187)
T ss_dssp CSEEEECSBTTTBSSCTTTSSCSCCEEC----TTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHH
T ss_pred cCEEEEcCCCCcchHHHhhccCcchhhh----cccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHH
Confidence 569999999 11 11111 344321 123345556667889999999999999999999999988733478899
Q ss_pred HhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHHhc
Q psy8912 458 VDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 537 (538)
Q Consensus 458 L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~~~ 537 (538)
|+.+|+.+||+...+.+++|++.|.++++++|++|++|+||||+.+|+++|+++|+.+++|.+|.+.+.|.++|..|+++
T Consensus 103 l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~l~~~~~~ 182 (187)
T 2wm8_A 103 LELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAKA 182 (187)
T ss_dssp HHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHHHHHHHHT
T ss_pred HHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99999999999655667788999999999999999999999999999999999999999999999999999999999876
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=173.59 Aligned_cols=121 Identities=18% Similarity=0.060 Sum_probs=104.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.+.. . +++||+.|..+++++|++|++
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 179 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVE-KAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPER 179 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 6677999999999999999999999999988 889999999999999997622 2 345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++|||+.+|+.+|+++|+.+++|.+|......... ..+|+++.+..
T Consensus 180 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~---~~ad~v~~~~~ 226 (237)
T 4ex6_A 180 CVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMR---AGADTVVDSFP 226 (237)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHH---TTCSEEESSHH
T ss_pred eEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHh---cCCCEEECCHH
Confidence 999999999999999999999999998766554433 36788886633
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=169.82 Aligned_cols=125 Identities=18% Similarity=0.153 Sum_probs=104.3
Q ss_pred cCCCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVF 129 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~ 129 (538)
.....++||+.++|+.|+++| ++++++||... ......++.+++..+|+.+...+++||..|..+++++|++|++|++
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~-~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 101 KMPIELLPGVKETLKTLKETGKYKLVVATKGDL-LDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCH-HHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGGEEE
T ss_pred hccCCcCccHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcceEEE
Confidence 445689999999999999999 99999999977 8889999999999999988777788999999999999999999999
Q ss_pred EeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 130 FDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 130 IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|||+. +|+.+|+++|+.+++|..|..............+|+++.+..
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~ 227 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLD 227 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGG
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHH
Confidence 99997 999999999999999966654322222233444477776643
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=168.57 Aligned_cols=147 Identities=12% Similarity=0.088 Sum_probs=112.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------------
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------ 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------ 83 (538)
+|+|+||+||||+... ..+. ......+++||+.++|+.|+++|++++|+||++..
T Consensus 1 ~k~v~~D~DGtL~~~~-~~~~------------~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~ 67 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDS-DAFV------------KSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNA 67 (179)
T ss_dssp CCEEEECSBTTTBCCC-TTCC------------CSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHH
T ss_pred CCEEEEcCCCccccCC-CccC------------CCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHH
Confidence 4799999999998632 0010 01235789999999999999999999999999641
Q ss_pred --HHHHHHHHHcC--CCCCCcce----ee--cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 84 --LHAKQILNLIN--LNQYFSNK----EI--YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 84 --~~~~~~L~~lg--L~~~Fd~i----e~--~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
..+...++.+| +..+|... +. ..+++|++|..+++++|++|++|+||||+.+|+.+|+++|+.+++|.+|
T Consensus 68 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g 147 (179)
T 3l8h_A 68 IHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG 147 (179)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC
Confidence 35677888888 55555321 11 2345669999999999999999999999999999999999999999998
Q ss_pred CCchHhHHhhCCCCCCEEEeCCc
Q psy8912 154 MSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 154 ~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
......... ....||+++.+..
T Consensus 148 ~~~~~~~~~-~~~~~d~v~~~l~ 169 (179)
T 3l8h_A 148 NGRKTLAQG-GLPEGTRVCEDLA 169 (179)
T ss_dssp THHHHHHHC-CCCTTEEEESSHH
T ss_pred Ccchhhhhc-ccCCCcEEecCHH
Confidence 765554322 1356888887744
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=171.54 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=102.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC--cceee-----cCCCCHHHHHHHHHHcCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--SNKEI-----YPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F--d~ie~-----~~~~Kp~~f~~ale~lgi~P 124 (538)
....++||+.++|+.|+++|++++++||+.. ..+...++. ++..+| +.+.. .++++|+.|..+++++|++|
T Consensus 106 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~ 183 (243)
T 3qxg_A 106 PEAERMPGAWELLQKVKSEGLTPMVVTGSGQ-LSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKA 183 (243)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEECCCCC-HHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCH
Confidence 3567999999999999999999999999988 888888888 999999 76521 23456799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++|++|||+.+|+.+|+++|+.++++.+|......+.. ..+|+++.+..
T Consensus 184 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~---~~ad~v~~s~~ 232 (243)
T 3qxg_A 184 DEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLD---AGADLLFPSMQ 232 (243)
T ss_dssp GGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHH---TTCSEEESCHH
T ss_pred HHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHh---cCCCEEECCHH
Confidence 99999999999999999999999999998876555433 46788887643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.6e-19 Score=168.21 Aligned_cols=120 Identities=15% Similarity=0.000 Sum_probs=103.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|++.|++++++||... ..++..++.+|+..+|+.+ +.. ++++|..|..+++++|++|++
T Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 166 (233)
T 3s6j_A 88 HQIIALPGAVELLETLDKENLKWCIATSGGI-DTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDE 166 (233)
T ss_dssp GGCEECTTHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCch-hhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHH
Confidence 4478999999999999999999999999988 8899999999999999976 222 345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|++|||+.+|+.+|+++|+.+++|.+|......+.. ..+|+++.+.
T Consensus 167 ~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~---~~ad~v~~~~ 212 (233)
T 3s6j_A 167 CLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELER---AGALRVYEDP 212 (233)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHH---TTCSEEESSH
T ss_pred EEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHh---cCCCEEECCH
Confidence 999999999999999999999999988666555443 4578888763
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-19 Score=164.63 Aligned_cols=116 Identities=10% Similarity=-0.005 Sum_probs=100.1
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
..++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.+.. ..+++|..|..+++++|++|++|+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVK-ADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL 166 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcH-HHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence 47899999999999999999999999988 899999999999999997622 234567999999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|||+.+|+.+|+++|+.++++.++..... ...+++++.+..
T Consensus 167 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~------~~~a~~~~~~~~ 208 (214)
T 3e58_A 167 IIEDSEKGIAAGVAADVEVWAIRDNEFGMD------QSAAKGLLDSLT 208 (214)
T ss_dssp EEECSHHHHHHHHHTTCEEEEECCSSSCCC------CTTSSEEESSGG
T ss_pred EEeccHhhHHHHHHCCCEEEEECCCCccch------hccHHHHHHHHH
Confidence 999999999999999999999987643322 257888887644
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-19 Score=167.48 Aligned_cols=149 Identities=15% Similarity=0.062 Sum_probs=116.0
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc--HHHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--ILHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~--p~~~~~~L~~l 93 (538)
+|+|+||+||||+......+. ...........++||+.++|+.|+++|++++|+||++. +..+...++.+
T Consensus 3 ik~vifD~DgtL~~~~~~~y~--------~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~ 74 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYD--------HHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF 74 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSC--------SSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCceeeccchhhh--------hHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc
Confidence 799999999999652211111 00011134578999999999999999999999999854 26788899999
Q ss_pred CCCCCCcceee---------cCCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhh
Q psy8912 94 NLNQYFSNKEI---------YPGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEAT 163 (538)
Q Consensus 94 gL~~~Fd~ie~---------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l 163 (538)
|+..+|+.+.. ..+++|++|..+++++|++|++|+||||+ ..|+.+|+++|+.+++|.++...... ..+
T Consensus 75 gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~ 153 (189)
T 3ib6_A 75 GIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD-ERL 153 (189)
T ss_dssp TCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCS-SCC
T ss_pred CchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccc-ccc
Confidence 99999998722 22445689999999999999999999999 69999999999999999987653221 223
Q ss_pred CCCCCCEEEe
Q psy8912 164 GIDYKDMIYF 173 (538)
Q Consensus 164 ~~~~~d~Ii~ 173 (538)
....|+++++
T Consensus 154 ~~~~~~~v~~ 163 (189)
T 3ib6_A 154 PLVAPPFVIP 163 (189)
T ss_dssp CBCSSSCEEE
T ss_pred ccCCCcceec
Confidence 4457899998
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7e-19 Score=168.88 Aligned_cols=120 Identities=18% Similarity=0.137 Sum_probs=103.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..++..++.+|+..+|+.+.. .++++|+.|..+++++|++|+
T Consensus 79 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 157 (222)
T 2nyv_A 79 VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLE-ELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPE 157 (222)
T ss_dssp CSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGG
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCch
Confidence 35678999999999999999999999999988 889999999999999997622 244677999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|++|||+.+|+.+|+++|+.+++|.+|...... ..+++++.+..+
T Consensus 158 ~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~------~~~~~~~~~~~e 203 (222)
T 2nyv_A 158 KALIVGDTDADIEAGKRAGTKTALALWGYVKLNS------QIPDFTLSRPSD 203 (222)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC------CCCSEEESSTTH
T ss_pred hEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc------cCCCEEECCHHH
Confidence 9999999999999999999999999988654321 468888876543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-19 Score=168.26 Aligned_cols=120 Identities=18% Similarity=0.157 Sum_probs=103.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.+. .. +++||..|..+++++|++|++
T Consensus 83 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 161 (226)
T 3mc1_A 83 FENKVYDGIEALLSSLKDYGFHLVVATSKPT-VFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDD 161 (226)
T ss_dssp GSCCBCTTHHHHHHHHHHHTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGG
T ss_pred ccCccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCccc
Confidence 3467999999999999999999999999987 88999999999999999762 22 345678999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|++|||+.+|+.+|+++|+.+++|.+|......... ..+|+++.+.
T Consensus 162 ~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~---~~ad~v~~s~ 207 (226)
T 3mc1_A 162 AIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKN---AGANYIVNSV 207 (226)
T ss_dssp EEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHH---HTCSEEESSH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHH---cCCCEEECCH
Confidence 999999999999999999999999998876655422 3578888753
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-19 Score=167.63 Aligned_cols=117 Identities=17% Similarity=0.086 Sum_probs=99.8
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC--ccee----ecCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--SNKE----IYPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F--d~ie----~~~~~Kp~~f~~ale~lgi~P 124 (538)
.....++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+| +.+. ..++++|+.|..+++++|++|
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~ 144 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNAR-ELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP 144 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCch-HHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 45678999999999999999999999999988 8999999999999999 6541 123456689999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
++|++|||+.+|+.+|+++|+.+|++.++.... ...+|+++.+.
T Consensus 145 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~-------~~~ad~v~~~~ 188 (205)
T 3m9l_A 145 SRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPW-------PELTDWHARDC 188 (205)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEECSSSSCSC-------GGGCSEECSSH
T ss_pred HHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcc-------cccCCEEeCCH
Confidence 999999999999999999999999999876421 12478877653
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.4e-20 Score=161.89 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=104.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|+||+|||||. ...++||+.++|+.|+++|++++++||++. ..++..++.+|+
T Consensus 2 ~k~i~~D~DgtL~~-----------------------~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~-~~~~~~l~~~~l 57 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG-----------------------TDEDQRRWRNLLAAAKKNGVGTVILSNDPG-GLGAAPIRELET 57 (137)
T ss_dssp CCEEEECSTTTTSS-----------------------CHHHHHHHHHHHHHHHHTTCEEEEEECSCC-GGGGHHHHHHHH
T ss_pred CcEEEEeccceecC-----------------------CCccCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHCCh
Confidence 58999999999976 456889999999999999999999999988 788888999999
Q ss_pred CCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchH
Q psy8912 96 NQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 96 ~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
..+|+.+.. ..+++|++|..+++++|++|++|+||||+..|+.+|+++|+.++++.++.....
T Consensus 58 ~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~~~~ 125 (137)
T 2pr7_A 58 NGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVV 125 (137)
T ss_dssp TTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHHHHHH
T ss_pred HhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChHHHHH
Confidence 999997622 244567899999999999999999999999999999999999999987655443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-19 Score=170.51 Aligned_cols=120 Identities=11% Similarity=0.059 Sum_probs=101.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..++..++.+|+. +|+.+.. .++++|++|..+++++|++|+
T Consensus 106 ~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~ 183 (240)
T 2hi0_A 106 QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPN-EAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRD 183 (240)
T ss_dssp SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGG
T ss_pred hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 34567899999999999999999999999987 8889999999998 9997622 234567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|++|||+.+|+.+|+++|+.+|+|.+|......... ..+++++.+.
T Consensus 184 ~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~---~~a~~~~~~~ 230 (240)
T 2hi0_A 184 KCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQK---HGATVIVDTA 230 (240)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHH---TTCCCEECSH
T ss_pred HeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHh---cCCCEEECCH
Confidence 9999999999999999999999999988765443322 3577777653
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=164.24 Aligned_cols=119 Identities=12% Similarity=0.046 Sum_probs=102.4
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+ +|++++++||++. ...+..++.+|+..+|+.+.. .++++|..|..+++++|++|+
T Consensus 103 ~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 180 (240)
T 3qnm_A 103 PTKSGLMPHAKEVLEYLA-PQYNLYILSNGFR-ELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELR 180 (240)
T ss_dssp GGCCCBSTTHHHHHHHHT-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGG
T ss_pred hhcCCcCccHHHHHHHHH-cCCeEEEEeCCch-HHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcc
Confidence 345789999999999999 9999999999988 888999999999999997622 234567999999999999999
Q ss_pred cEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 126 DMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 126 e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|++|||+. +|+.+|+++|+.+++++++.. ......||+++.+..+
T Consensus 181 ~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~------~~~~~~~d~vi~sl~e 227 (240)
T 3qnm_A 181 ESLMIGDSWEADITGAHGVGMHQAFYNVTER------TVFPFQPTYHIHSLKE 227 (240)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEECCSCC------CCCSSCCSEEESSTHH
T ss_pred cEEEECCCchHhHHHHHHcCCeEEEEcCCCC------CCcCCCCceEECCHHH
Confidence 999999996 999999999999999998875 1334578999987543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=166.57 Aligned_cols=121 Identities=11% Similarity=0.074 Sum_probs=100.4
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC--ccee---e--cCCCCHHHHHHHHHHcCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--SNKE---I--YPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F--d~ie---~--~~~~Kp~~f~~ale~lgi~P 124 (538)
....++||+.++|+.|+++|++++++||+.. ..+...++. ++..+| +.+. . .++++|+.|..+++++|++|
T Consensus 105 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~ 182 (247)
T 3dv9_A 105 PKAERMPGALEVLTKIKSEGLTPMVVTGSGQ-TSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKP 182 (247)
T ss_dssp CCCCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCG
T ss_pred ccCCCCCCHHHHHHHHHHcCCcEEEEcCCch-HHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCCh
Confidence 3468899999999999999999999999988 778888888 999999 7651 1 23456799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|||+.+|+.+|+++|+.+++|.+|......+. ...+|+++.+..+
T Consensus 183 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~---~~~ad~v~~~~~e 232 (247)
T 3dv9_A 183 NEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLL---NEGANLLFHSMPD 232 (247)
T ss_dssp GGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHH---TTTCSEEESSHHH
T ss_pred hheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHH---hcCCCEEECCHHH
Confidence 9999999999999999999999999999877655433 3568998877443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.6e-19 Score=173.50 Aligned_cols=129 Identities=13% Similarity=0.041 Sum_probs=105.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc-e---ee---cCCCCHHHHHHHHHHcCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-K---EI---YPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~-i---e~---~~~~Kp~~f~~ale~lgi~P 124 (538)
....++||+.++|+.|+++|++++++||... ..++..++.+|+..+|+. + +. .++++|+.|..+++++|++|
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSER-GRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP 185 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCH-HHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH
Confidence 5678999999999999999999999999988 899999999999999987 5 22 33455799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc----hHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS----GRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~----~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
++|++|||+.+|+.+|+++|+.+++|.+|... .+... ...+|+++.+.. +....+..
T Consensus 186 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~---~~~ad~vi~~l~-el~~~l~~ 246 (259)
T 4eek_A 186 ERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALS---RLGAARVLTSHA-ELRAALAE 246 (259)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHH---HHTCSEEECSHH-HHHHHHHH
T ss_pred HHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHH---hcCcchhhCCHH-HHHHHHHh
Confidence 99999999999999999999999999987544 33332 235788887643 33333333
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-19 Score=169.66 Aligned_cols=126 Identities=10% Similarity=-0.034 Sum_probs=95.6
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+|+||+||||.+.........+. ......++||+.++|+.|+++|++++|+||+.. ..+... .+
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~~~~~~---------~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~-~~~~~~---~~ 71 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAATSDTP---------DDEHAQLTPGAQNALKALRDQGMPCAWIDELPE-ALSTPL---AA 71 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTTSCSSC---------CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCH-HHHHHH---HT
T ss_pred cCCEEEEcCCCceEeccccccchhhc---------ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChH-HHHHHh---cC
Confidence 48999999999996511110000000 123457899999999999999999999999977 555333 33
Q ss_pred CCCCCccee---e--cCCCCHHHHHHHHHHcCCCC-CcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 95 LNQYFSNKE---I--YPGQKTTHFESLKKATGIEY-KDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 95 L~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P-~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
.+|+.+. . .++++|++|..+++++|+.| ++|+||||+.+|+++|+++||.+|+|.+|..
T Consensus 72 --~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 72 --PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp --TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred --ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 4566552 1 23456799999999999976 8999999999999999999999999999865
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=167.95 Aligned_cols=123 Identities=16% Similarity=0.188 Sum_probs=105.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCC-C
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~-P 124 (538)
.....++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.+. .. ++++|..|..+++++|++ |
T Consensus 106 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 184 (240)
T 3sd7_A 106 IFENKIYENMKEILEMLYKNGKILLVATSKPT-VFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDK 184 (240)
T ss_dssp GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCG
T ss_pred ccccccCccHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCC
Confidence 34467999999999999999999999999977 88999999999999999762 22 335678999999999999 9
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|||+.+|+.+|+++|+.+++|.+|......... ..+|+++.+..+
T Consensus 185 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~---~~ad~v~~~~~e 234 (240)
T 3sd7_A 185 DKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISE---SEPTYIVENVES 234 (240)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHH---HCCSEEESSSTT
T ss_pred CcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhh---cCCCEEECCHHH
Confidence 99999999999999999999999999998876655432 357888876543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-19 Score=168.94 Aligned_cols=145 Identities=12% Similarity=0.034 Sum_probs=111.9
Q ss_pred cCCCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc---------
Q psy8912 12 VKKFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--------- 82 (538)
Q Consensus 12 m~~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~--------- 82 (538)
|..++|+++||+|||||... .+ .+......++||+.++|+.|+++|++++|+||++.
T Consensus 21 m~~~~k~v~~D~DGTL~~~~--~~------------~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~ 86 (211)
T 2gmw_A 21 MAKSVPAIFLDRDGTINVDH--GY------------VHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEA 86 (211)
T ss_dssp ---CBCEEEECSBTTTBCCC--SS------------CCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHH
T ss_pred hhhcCCEEEEcCCCCeECCC--Cc------------ccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHH
Confidence 44457999999999998632 00 00123468999999999999999999999999982
Q ss_pred -----HHHHHHHHHHcCCCCCCcceee-----------------cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q psy8912 83 -----ILHAKQILNLINLNQYFSNKEI-----------------YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 140 (538)
Q Consensus 83 -----p~~~~~~L~~lgL~~~Fd~ie~-----------------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aA 140 (538)
...+...++.+|+. |+.+.. .++++|++|..+++++|++|++|+||||+.+|+.+|
T Consensus 87 ~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a 164 (211)
T 2gmw_A 87 QFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAA 164 (211)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence 16788889999986 654311 134566999999999999999999999999999999
Q ss_pred hhcCCeE-EEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 141 SPLGVTC-IHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 141 k~aG~~t-I~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+++|+.+ ++|.+|........ ..+|+++.+..
T Consensus 165 ~~aG~~~~i~v~~g~~~~~~~~----~~~d~vi~~l~ 197 (211)
T 2gmw_A 165 VAANVGTKVLVRTGKPITPEAE----NAADWVLNSLA 197 (211)
T ss_dssp HHTTCSEEEEESSSSCCCHHHH----HHCSEEESCGG
T ss_pred HHCCCceEEEEecCCCcccccc----CCCCEEeCCHH
Confidence 9999999 99999875443221 24788876643
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=164.61 Aligned_cols=119 Identities=13% Similarity=0.059 Sum_probs=101.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++++||++. ..+...++.+|+..+|+.+.. . .+++|..|..+++++|++|++
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 171 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSR-HSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESE 171 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCccc
Confidence 4678899999999999999999999999988 889999999999999997622 2 345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|++|||+.+|+.+|+++|+.++++.++..... .....+|+++.+.
T Consensus 172 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 216 (230)
T 3um9_A 172 ILFVSCNSWDATGAKYFGYPVCWINRSNGVFD----QLGVVPDIVVSDV 216 (230)
T ss_dssp EEEEESCHHHHHHHHHHTCCEEEECTTSCCCC----CSSCCCSEEESSH
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEEeCCCCccc----cccCCCcEEeCCH
Confidence 99999999999999999999999998754332 1235788888764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-18 Score=165.81 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=100.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||++. ..+...++.+|+..+|+.+.. ..+++|+.|..+++++|++|++|
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 181 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGND-EMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEV 181 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 467899999999999999999999999988 889999999999999997622 23456789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCC-CEEEeCCc
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYK-DMIYFDDE 176 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~-d~Ii~d~~ 176 (538)
++|||+.+|+.+|+++|+.+++|.+|.. .. .+ ...+ ++++.+..
T Consensus 182 ~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~---~~-~~~~~~~~~~~~~ 226 (240)
T 2no4_A 182 CFVSSNAWDLGGAGKFGFNTVRINRQGN-PP---EY-EFAPLKHQVNSLS 226 (240)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTTCC-CC---CC-TTSCCSEEESSGG
T ss_pred EEEeCCHHHHHHHHHCCCEEEEECCCCC-CC---cc-cCCCCceeeCCHH
Confidence 9999999999999999999999998764 11 11 2457 88876643
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.9e-19 Score=166.87 Aligned_cols=119 Identities=10% Similarity=0.032 Sum_probs=101.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||++. ..+...++.+|+..+|+.+.. . .+++|..|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNP-QMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCH-HHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 477899999999999999999999999988 889999999999999997622 2 3456689999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++|||+.+|+.+|+++|+.++++.++...... + ...+|+++.+..
T Consensus 176 ~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~---~-~~~~~~v~~~~~ 220 (233)
T 3umb_A 176 LFVSSNGWDACGATWHGFTTFWINRLGHPPEA---L-DVAPAAAGHDMR 220 (233)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTTCCCCCS---S-SCCCSEEESSHH
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCCCchh---c-cCCCCEEECCHH
Confidence 99999999999999999999999987654332 1 356888887643
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=165.32 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=102.7
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.+. .. .+++|++|..+++++|++|++|
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 170 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELGYELGIITDGNP-VKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEA 170 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHTCEEEEEECSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEECCCc-hhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 356899999999999999999999999987 88899999999999999762 22 3456799999999999999999
Q ss_pred EEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 128 VFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 128 L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
++|||+. +|+.+|+++|+.+++|.+|........ ....+|+++.+..+.
T Consensus 171 i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~--~~~~~~~~i~~~~el 220 (241)
T 2hoq_A 171 LMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELE--YRKYADYEIDNLESL 220 (241)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHT--TGGGCSEEESSTTHH
T ss_pred EEECCCchHhHHHHHHCCCEEEEECCCCCCccccc--ccCCCCEEECCHHHH
Confidence 9999998 999999999999999988876544321 123578888775443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=163.25 Aligned_cols=113 Identities=17% Similarity=0.107 Sum_probs=95.1
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..++..++.+|+..+|+.+.. . ++++|+.|..+++++|++|+
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 177 (231)
T 3kzx_A 99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNG-ERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPS 177 (231)
T ss_dssp CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred cccceECcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence 35678999999999999999999999999988 889999999999999997622 2 34556999999999999999
Q ss_pred -cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 126 -DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 126 -e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+|++|||+.+|+.+|+++|+.++++.++.. ..+++++.+
T Consensus 178 ~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----------~~~~~~~~~ 217 (231)
T 3kzx_A 178 KEVFFIGDSISDIQSAIEAGCLPIKYGSTNI----------IKDILSFKN 217 (231)
T ss_dssp TTEEEEESSHHHHHHHHHTTCEEEEECC---------------CCEEESS
T ss_pred cCEEEEcCCHHHHHHHHHCCCeEEEECCCCC----------CCCceeeCC
Confidence 999999999999999999999999965432 245666655
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=166.05 Aligned_cols=122 Identities=18% Similarity=0.202 Sum_probs=101.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..++..++.+|+..+|+.+.. . .+++|+.|..+++++|++|+
T Consensus 110 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 188 (243)
T 2hsz_A 110 CNISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 188 (243)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCccCCCHHHHHHHHHHCCCEEEEEECCcH-HHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChh
Confidence 34568999999999999999999999999988 889999999999999987621 2 23456899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|++|||+.+|+.+|+++|+.+++|.+|....... ....+|+++.+..
T Consensus 189 ~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~---~~~~ad~vi~~~~ 236 (243)
T 2hsz_A 189 QILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPI---AQSKPDWIFDDFA 236 (243)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCG---GGGCCSEEESSGG
T ss_pred hEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhh---hhCCCCEEECCHH
Confidence 99999999999999999999999999886532221 1345788886643
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=163.73 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=99.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||++. ..+...++.+|+..+|+.+.. . ++++|+.|..+++++|++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 457899999999999999999999999988 889999999999999997622 2 3456789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
++|||+.+|+.+|+++|+.++++.++...... ....+++++.+.
T Consensus 172 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 215 (232)
T 1zrn_A 172 LFVASNAWDATGARYFGFPTCWINRTGNVFEE----MGQTPDWEVTSL 215 (232)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTCCCCCS----SSCCCSEEESSH
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCCCccc----cCCCCCEEECCH
Confidence 99999999999999999999999887543221 124678887653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-18 Score=167.01 Aligned_cols=120 Identities=10% Similarity=-0.009 Sum_probs=98.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCCCCccee-----ec--CCCCHHHHHHHHHHcCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKE-----IY--PGQKTTHFESLKKATGI 122 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~~Fd~ie-----~~--~~~Kp~~f~~ale~lgi 122 (538)
.....++||+.++|+.|+++|++++++||+.. ......+.. +++..+|+.+. .. .+++|++|..+++++|+
T Consensus 108 ~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~-~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi 186 (250)
T 3l5k_A 108 FPTAALMPGAEKLIIHLRKHGIPFALATSSRS-ASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP 186 (250)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCCEEEECSCCH-HHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSS
T ss_pred hccCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCC
Confidence 34578999999999999999999999999987 666665544 57778888762 22 23456899999999999
Q ss_pred CC--CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 123 EY--KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 123 ~P--~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+| ++|++|||+.+|+.+|+++|+.+++|.+|..... ....+|+++.+..
T Consensus 187 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~-----~~~~ad~v~~sl~ 237 (250)
T 3l5k_A 187 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRD-----LTTKATLVLNSLQ 237 (250)
T ss_dssp CCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGG-----GSTTSSEECSCGG
T ss_pred CCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchh-----hcccccEeecCHH
Confidence 98 9999999999999999999999999999876543 2357888887644
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-18 Score=165.54 Aligned_cols=103 Identities=9% Similarity=-0.070 Sum_probs=91.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-Ccce---eec--CCCCHHHHHHHHHHcCCCC-
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-FSNK---EIY--PGQKTTHFESLKKATGIEY- 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-Fd~i---e~~--~~~Kp~~f~~ale~lgi~P- 124 (538)
....++||+.++|+.|+++|++++++||.+. ..++..++.+++..+ |+.+ +.. ++++|..|..+++++|++|
T Consensus 108 ~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 186 (277)
T 3iru_A 108 QRSQLIPGWKEVFDKLIAQGIKVGGNTGYGP-GMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHV 186 (277)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCG
T ss_pred ccCccCcCHHHHHHHHHHcCCeEEEEeCCch-HHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCC
Confidence 3468899999999999999999999999988 888999999998888 7765 122 3456799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
++|++|||+.+|+.+|+++|+.+++|.+|..
T Consensus 187 ~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 187 NGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred ccEEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 9999999999999999999999999999864
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=158.50 Aligned_cols=120 Identities=8% Similarity=0.001 Sum_probs=101.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcC-CCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATG-IEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lg-i~P 124 (538)
.....++||+.++|+.|+++ ++++++||+.. ..+...++.+|+..+|+.+.. ..+++|..|..+++++| ++|
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 99 EEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVS-HTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSA 176 (238)
T ss_dssp TTCCCBCTTHHHHHHHHHTT-SEEEEEECSCH-HHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCG
T ss_pred HhcCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCCh
Confidence 34578999999999999999 99999999988 888999999999999997622 23456799999999999 999
Q ss_pred CcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|||+. +|+.+|+++|+.++++.+|.... .....+|+++.+..+
T Consensus 177 ~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~-----~~~~~ad~v~~~~~e 225 (238)
T 3ed5_A 177 EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPN-----VPEIIPTYEIRKLEE 225 (238)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCC-----TTCCCCSEEESSGGG
T ss_pred hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCC-----cccCCCCeEECCHHH
Confidence 9999999998 99999999999999998874322 234578988876443
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-18 Score=160.69 Aligned_cols=118 Identities=19% Similarity=0.242 Sum_probs=101.4
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++|++.++|+.|+++ ++++++||++. ..+...++.+|+..+|+.+.. ..+++|..|..+++++|++|++|
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDT-EQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCH-HHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 567899999999999999 99999999988 889999999999999997622 24456788999999999999999
Q ss_pred EEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 128 VFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 128 L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|||+. +|+.+|+++|+.+++|.+|........ .+|+++.+..+
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~-----~a~~~~~~~~e 221 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWD-----KCDFIVSDLRE 221 (234)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGG-----GCSEEESSTHH
T ss_pred EEEcCCcHHHHHHHHHcCCEEEEECCCCCcccccc-----CCCEeeCCHHH
Confidence 9999997 999999999999999998865443322 68888877544
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=162.22 Aligned_cols=124 Identities=12% Similarity=0.142 Sum_probs=100.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
.....++||+.++|+.|+ +|++++++||+.. ..+...++.+|+..+|+.+...++++|+.|..+++++|++|++|++|
T Consensus 108 ~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~i 185 (251)
T 2pke_A 108 QHPVEVIAGVREAVAAIA-ADYAVVLITKGDL-FHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMI 185 (251)
T ss_dssp TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCH-HHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred hccCCcCccHHHHHHHHH-CCCEEEEEeCCCH-HHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEE
Confidence 345678999999999999 9999999999988 88899999999999999876666778899999999999999999999
Q ss_pred eCCc-ccHHHHhhcCCeEEEECCCCCchHh-HHhhCCCCCCE-EEeCCc
Q psy8912 131 DDEE-RNSHDVSPLGVTCIHSWLMMSSGRL-KEATGIDYKDM-IYFDDE 176 (538)
Q Consensus 131 GDs~-~DI~aAk~aG~~tI~V~~G~~~~~~-~~~l~~~~~d~-Ii~d~~ 176 (538)
||+. +|+.+|+++|+.+++|.+|...... ...+....+++ ++.+..
T Consensus 186 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 234 (251)
T 2pke_A 186 GNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPS 234 (251)
T ss_dssp ESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGG
T ss_pred CCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHH
Confidence 9999 9999999999999999887643211 11133456887 665543
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-18 Score=168.21 Aligned_cols=122 Identities=11% Similarity=0.100 Sum_probs=96.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---CCCCCCccee---ecCCCCHHHHHHHHHHcCCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKE---IYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---gL~~~Fd~ie---~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+ |+.++|+.+. ..+++.|++|..+++++|++|+
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSV-EAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 3467999999999999999999999999988 7888888854 5889999752 1234456999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|+||||+..|+.+|+++|+.+|+|.++......... ..+++++.+..+
T Consensus 206 ~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~---~~~~~~i~~l~e 254 (261)
T 1yns_A 206 NILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDE---KTYYSLITSFSE 254 (261)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHH---HHHSCEESSGGG
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccc---cCCCEEECCHHH
Confidence 9999999999999999999999999764332111111 135666665443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=159.99 Aligned_cols=117 Identities=9% Similarity=0.062 Sum_probs=99.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecCCCC--HHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYPGQK--TTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~~~K--p~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++ ++++++||++. ..++..++.+|+..+|+.+. ..+..| |+.|..+++++|++|++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 157 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRR-NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQN 157 (209)
T ss_dssp GGCEECTTHHHHHHHSCTT-SEEEEECSSCH-HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGG
T ss_pred ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCH-HHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCccc
Confidence 4577999999999999999 99999999988 88999999999989998762 223345 69999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|++|||+.+|+.+|+++|+.++++.+|...... +.. +++++.+.
T Consensus 158 ~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~---~~~--a~~~~~~~ 201 (209)
T 2hdo_A 158 ALFIGDSVSDEQTAQAANVDFGLAVWGMDPNAD---HQK--VAHRFQKP 201 (209)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGG---GSC--CSEEESSG
T ss_pred EEEECCChhhHHHHHHcCCeEEEEcCCCCChhh---hcc--CCEEeCCH
Confidence 999999999999999999999999987654332 333 88888653
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=158.49 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=101.2
Q ss_pred CCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee----cCCCC--HHHHHHHHHHcC--C
Q psy8912 52 TLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEI----YPGQK--TTHFESLKKATG--I 122 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~----~~~~K--p~~f~~ale~lg--i 122 (538)
....++||+.++|+.|+++ |++++|+||+.. ..++..++.+|+..+|+.+.. .+.+| |..|..+++++| +
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcH-HHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 4567899999999999999 999999999988 889999999999999986421 12233 367999999999 9
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|++|++|||+.+|+.+|+++|+.+++|.+|........ ...+++++.+..
T Consensus 169 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~---~~~a~~v~~~~~ 219 (234)
T 2hcf_A 169 SPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELA---RHKPGTLFKNFA 219 (234)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHH---TTCCSEEESCSC
T ss_pred CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHH---hCCCCEEeCCHH
Confidence 999999999999999999999999999999876554433 245788887644
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=159.28 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=91.0
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eec--CCCCHHHHHHHHHHcCCCCCcEEE
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIY--PGQKTTHFESLKKATGIEYKDMVF 129 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~--~~~Kp~~f~~ale~lgi~P~e~L~ 129 (538)
.++||+.++|+.|+++|++++++||++. +...++.+|+..+|+.+ +.. ++++|++|..+++++|++|++|++
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 4899999999999999999999999855 88899999999999976 222 234457899999999999999999
Q ss_pred EeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhH
Q psy8912 130 FDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHV 180 (538)
Q Consensus 130 IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~ 180 (538)
|||+.+|+.+|+++|+.++++++.. .+. .+|+++.+..+..+
T Consensus 169 vGDs~~Di~~a~~aG~~~~~~~~~~-------~~~--~ad~v~~s~~el~~ 210 (233)
T 3nas_A 169 IEDAEAGISAIKSAGMFAVGVGQGQ-------PML--GADLVVRQTSDLTL 210 (233)
T ss_dssp EECSHHHHHHHHHTTCEEEECC----------------CSEECSSGGGCCH
T ss_pred EeCCHHHHHHHHHcCCEEEEECCcc-------ccc--cCCEEeCChHhCCH
Confidence 9999999999999999999996532 122 68898887655543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=158.58 Aligned_cols=119 Identities=7% Similarity=0.008 Sum_probs=97.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|++.++|+.|+++ ++++++||++. ......++.+|+. |+.+ +. ..+++|..|..+++++|++|++
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 188 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNT-SLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGE 188 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSSSCH-HHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCH-HHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHH
Confidence 3567899999999999997 99999999988 8889999999985 7765 22 2445679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEEC----CCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSW----LMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~----~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++|||+.+|+.+|+++|+.++++. +|....... .....+|+++.+..
T Consensus 189 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~--~~~~~~d~~~~~~~ 240 (254)
T 3umg_A 189 VMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDL--APTGSWDISATDIT 240 (254)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCS--SCSSCCSEEESSHH
T ss_pred EEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccc--cccCCCceEECCHH
Confidence 9999999999999999999999998 555433321 03467899887744
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-17 Score=164.24 Aligned_cols=120 Identities=12% Similarity=0.074 Sum_probs=98.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|++ |++++|+||++. ..+...++.+|+..+|+.+.. . ++++|++|..+++++|++|++
T Consensus 118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 195 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRK-EVRLLLLTNGDR-QTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD 195 (260)
T ss_dssp HTCCCCHHHHHHHHHHHT-TSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred hcCCCCcCHHHHHHHHHc-CCcEEEEECcCh-HHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 356799999999999998 599999999988 888999999999999998622 2 345578999999999999999
Q ss_pred EEEEeCC-cccHHHHhhcCC-eEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 127 MVFFDDE-ERNSHDVSPLGV-TCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 127 ~L~IGDs-~~DI~aAk~aG~-~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|+||||+ .+|+++|+++|+ .++++.++.... ......+++++.+..+
T Consensus 196 ~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~----~~~~~~~~~~i~~~~e 244 (260)
T 2gfh_A 196 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVP----LTSSPMPHYMVSSVLE 244 (260)
T ss_dssp EEEEESCTTTHHHHHHHTTCSEEEEECTTCCCC----SSCCCCCSEEESSGGG
T ss_pred EEEECCCchhhHHHHHHCCCceEEEEcCCCCCc----CcccCCCCEEECCHHH
Confidence 9999995 899999999999 899997653221 1233568888876443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=158.21 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=94.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHH---HHHcCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESL---KKATGIE 123 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~a---le~lgi~ 123 (538)
....++||+.++|+.|++ |++++++||++. ......++. +..+|+.+.. ..+++|++|..+ ++++|++
T Consensus 96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~-~~~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~ 171 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDR-NEFKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIE 171 (240)
T ss_dssp GGCCBCTTHHHHHHHHHH-HSEEEEEESSCH-HHHHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred hcCCCCCcHHHHHHHHHh-CCeEEEEeCCCh-hHHHHHHHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 345789999999999999 899999999987 777777776 5578987622 234556889888 8999999
Q ss_pred CCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCC---chHhHHhhCCCCCCEEEeCCc
Q psy8912 124 YKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMS---SGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 124 P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~---~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++|++|||+. +|+.+|+++|+.+++++.+.. ............+|+++.+..
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~ 228 (240)
T 3smv_A 172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMG 228 (240)
T ss_dssp GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHH
T ss_pred chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHH
Confidence 99999999996 999999999999999986521 111112244568899887643
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-18 Score=159.60 Aligned_cols=108 Identities=9% Similarity=0.029 Sum_probs=94.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++| +++++||++. ..+...++.+|+..+|+.+.. ..+++|+.|..+++++|++|++|
T Consensus 84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 161 (200)
T 3cnh_A 84 QSQPRPEVLALARDLGQRY-RMYSLNNEGR-DLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEA 161 (200)
T ss_dssp TCCBCHHHHHHHHHHTTTS-EEEEEECCCH-HHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCccCccHHHHHHHHHHcC-CEEEEeCCcH-HHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 4458999999999999999 9999999988 888999999999999997622 24456789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
++|||+.+|+.+|+++|+.++++.++....+.+..
T Consensus 162 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~ 196 (200)
T 3cnh_A 162 VMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAA 196 (200)
T ss_dssp EEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHH
Confidence 99999999999999999999999887665554443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=161.56 Aligned_cols=97 Identities=10% Similarity=0.092 Sum_probs=87.9
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+ |++++++||++. ..++..++.+|+..+|+.+.. ..+++|+.|..+++++|++|++|
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 167 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSNGAP-DMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeCcCH-HHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 4578999999999999 999999999988 889999999999999997622 23456789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
++|||+.+|+.+|+++|+.++++++
T Consensus 168 ~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 168 LFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECC
T ss_pred EEEeCChhhHHHHHHCCCEEEEECC
Confidence 9999999999999999999999987
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=160.57 Aligned_cols=121 Identities=20% Similarity=0.224 Sum_probs=99.5
Q ss_pred CCCccCCCHHHHHHHhhhCCc--eEEEEcCCCcHHHHHHHHHHcCCCCCCccee---------ecCCCCHHHHHHHHHHc
Q psy8912 52 TLIKYYRGVPEILRYLKENKC--LVAAASRTSEILHAKQILNLINLNQYFSNKE---------IYPGQKTTHFESLKKAT 120 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~Gi--kiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---------~~~~~Kp~~f~~ale~l 120 (538)
....++||+.++|+.|+++|+ +++|+||+.. ..+...++.+|+..+|+.+. ..++++|+.|..+++++
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYK-NHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCH-HHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCCh-HHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 346789999999999999999 9999999988 88999999999999999762 12356779999999999
Q ss_pred CCCC-CcEEEEeCCcccHHHHhhcCC-eEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 121 GIEY-KDMVFFDDEERNSHDVSPLGV-TCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 121 gi~P-~e~L~IGDs~~DI~aAk~aG~-~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++| ++|++|||+.+|+.+|+++|+ .++++..+...... .....+|+++.+..
T Consensus 218 gi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~---~~~~~ad~vi~sl~ 272 (282)
T 3nuq_A 218 GLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEIL---GQTPEGAIVISDIL 272 (282)
T ss_dssp TCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC-------CCCCTTCEEESSGG
T ss_pred CCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCcccccc---ccCCCCCEEeCCHH
Confidence 9999 999999999999999999999 77788766533221 22346788887643
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-17 Score=158.37 Aligned_cols=119 Identities=9% Similarity=0.027 Sum_probs=98.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|++.++|+.|++. ++++++||... ..+...++.+|+. |+.+ +. .++++|..|..+++++|++|++
T Consensus 117 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 192 (254)
T 3umc_A 117 HRLRPWPDTLAGMHALKAD-YWLAALSNGNT-ALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQE 192 (254)
T ss_dssp GSCEECTTHHHHHHHHTTT-SEEEECCSSCH-HHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred hcCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHH
Confidence 4467899999999999986 99999999988 8889999999985 7765 22 3456779999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEEC----CCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSW----LMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~----~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++|||+.+|+.+|+++|+.+++++ +|......+ .....||+++.+..
T Consensus 193 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l--~~~~~ad~v~~~l~ 244 (254)
T 3umc_A 193 VMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDL--AAEQDWDLIASDLL 244 (254)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSS--SCSSCCSEEESSHH
T ss_pred EEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCccc--ccCCCCcEEECCHH
Confidence 9999999999999999999999998 565433322 02457899887743
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=155.92 Aligned_cols=114 Identities=11% Similarity=0.090 Sum_probs=96.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++ ++++++||++. . ++.+|+..+|+.+.. .++++|++|..+++++|++|++
T Consensus 102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 174 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNA-D-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASA 174 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTT-SEEEEEESSCC-C-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred ccCccCcCHHHHHHHHHhC-CeEEEEECCch-h-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchh
Confidence 4567999999999999998 99999999977 3 778899999997622 2345679999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|++|||+. +|+.+|+++|+.+++|.+|...... ...|++++.+..+
T Consensus 175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-----~~~~~~~~~~l~e 221 (230)
T 3vay_A 175 AVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-----DRLPDAEIHNLSQ 221 (230)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-----SSCCSEEESSGGG
T ss_pred eEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-----cCCCCeeECCHHH
Confidence 99999998 9999999999999999988764332 4578888877543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-17 Score=154.47 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=100.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++|++.++|+.|++.|++++++||... ...+..++.+++..+|+.+.. . .+++|..|..+++++|++|++|
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~ 170 (226)
T 1te2_A 92 TRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 170 (226)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cCCcCccHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHe
Confidence 467899999999999999999999999987 888899999999999987622 2 2345789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|||+.+|+.+|+.+|+.++++.++....... ...+++++.+..+
T Consensus 171 i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~----~~~a~~v~~~~~e 216 (226)
T 1te2_A 171 VALEDSVNGMIASKAARMRSIVVPAPEAQNDPR----FVLANVKLSSLTE 216 (226)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCTTTTTCGG----GGGSSEECSCGGG
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCCccccc----ccccCeEECCHHH
Confidence 999999999999999999999999876543322 2357888766443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.72 E-value=7.8e-18 Score=161.56 Aligned_cols=104 Identities=21% Similarity=0.291 Sum_probs=88.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH------HHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL------NLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L------~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~ 123 (538)
.++||+.++|+.|+++ ++++|+||++. ......+ +.+|+..+|+.+.. .++++|++|+.+++++|++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~-~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTND-IHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCH-HHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCCh-HHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 4679999999999999 99999999988 7777555 66788888987621 2345569999999999999
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhH
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLK 160 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~ 160 (538)
|++|++|||+.+|+.+|+++|+.+++++++....+.+
T Consensus 190 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 190 PKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 9999999999999999999999999999887655543
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=161.49 Aligned_cols=120 Identities=12% Similarity=0.026 Sum_probs=97.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IG 131 (538)
....++||+.++|+.|+++| +++|+||++. ..++..++.+|+.++|+.+.....+||..+..+++ |++|++|+|||
T Consensus 93 ~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~-~~~~~~l~~~gl~~~f~~~~~~~~~K~~~~~~~~~--~~~~~~~~~vg 168 (231)
T 2p11_A 93 FASRVYPGALNALRHLGARG-PTVILSDGDV-VFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVME--CYPARHYVMVD 168 (231)
T ss_dssp GGGGBCTTHHHHHHHHHTTS-CEEEEEECCS-SHHHHHHHHTTHHHHTTTCEEEESSGGGCHHHHHH--HSCCSEEEEEC
T ss_pred HhCCcCccHHHHHHHHHhCC-CEEEEeCCCH-HHHHHHHHHcCcHHhcCeeEEecCChHHHHHHHHh--cCCCceEEEEc
Confidence 35678999999999999999 9999999988 88999999999999998765445567777777766 89999999999
Q ss_pred CCcc---cHHHHhhcCCeEEEECCCCC--chHhHHhhCCCCCCEEEeCCch
Q psy8912 132 DEER---NSHDVSPLGVTCIHSWLMMS--SGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 132 Ds~~---DI~aAk~aG~~tI~V~~G~~--~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|+.+ |+.+|+++|+.+++|.+|.. ........ ..+++++.+..+
T Consensus 169 Ds~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~--~~~~~~i~~~~e 217 (231)
T 2p11_A 169 DKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSH--PPADVTVERIGD 217 (231)
T ss_dssp SCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHS--CCCSEEESSGGG
T ss_pred CccchhhhhHHHHHcCCeEEEeCCCCCCCcchhcccc--CCCceeecCHHH
Confidence 9998 99999999999999999853 22222221 137888876443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=160.90 Aligned_cols=122 Identities=13% Similarity=0.064 Sum_probs=100.5
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||... . +...++.+|+..+|+.+.. ..+++|++|..+++++|++|++|
T Consensus 104 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 181 (263)
T 3k1z_A 104 TWQVLDGAEDTLRECRTRGLRLAVISNFDR-R-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA 181 (263)
T ss_dssp GEEECTTHHHHHHHHHHTTCEEEEEESCCT-T-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cceECcCHHHHHHHHHhCCCcEEEEeCCcH-H-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 457999999999999999999999999765 3 6889999999999997622 24556799999999999999999
Q ss_pred EEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 128 VFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 128 L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
++|||+. +|+.+|+++|+.++++.++...... .+....+++++.+..+.
T Consensus 182 ~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~--~~~~~~ad~v~~~l~el 231 (263)
T 3k1z_A 182 AHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPV--VRDSVPKEHILPSLAHL 231 (263)
T ss_dssp EEEESCHHHHTHHHHTTTCEEEEECCSSCCCHH--HHHHSCGGGEESSGGGH
T ss_pred EEECCCcHHHHHHHHHCCCEEEEEcCCCCCchh--hcccCCCceEeCCHHHH
Confidence 9999997 9999999999999999988644321 12233578888775433
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=154.77 Aligned_cols=115 Identities=16% Similarity=0.182 Sum_probs=95.4
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---------------cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---------------~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.+.. .+++||..|..
T Consensus 71 ~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~ 149 (217)
T 3m1y_A 71 CESLPLFEGALELVSALKEKNYKVVCFSGGFD-LATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLV 149 (217)
T ss_dssp HTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHH
T ss_pred HhcCcCCCCHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHH
Confidence 34477999999999999999999999999988 899999999999999986510 23456789999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+++++|++|++|++|||+.+|+.+|+++|+.++. + ... ..+ ..+|+++.+.
T Consensus 150 ~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~---~~~-~l~----~~ad~v~~~~ 200 (217)
T 3m1y_A 150 LQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-N---AKE-VLK----QHATHCINEP 200 (217)
T ss_dssp HHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-S---CCH-HHH----TTCSEEECSS
T ss_pred HHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-C---ccH-HHH----Hhcceeeccc
Confidence 9999999999999999999999999999998765 2 122 222 3578888763
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.2e-17 Score=163.22 Aligned_cols=96 Identities=14% Similarity=0.186 Sum_probs=81.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc--C-------------CCCCCcceeecCCCCHHHHHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI--N-------------LNQYFSNKEIYPGQKTTHFESLK 117 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l--g-------------L~~~Fd~ie~~~~~Kp~~f~~al 117 (538)
...++||+.++|+. |++++|+||++. ..++..++.. | +..+|+.....+++.|++|+.++
T Consensus 123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~-~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~ 197 (253)
T 2g80_A 123 KAPVYADAIDFIKR----KKRVFIYSSGSV-KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANIL 197 (253)
T ss_dssp CBCCCHHHHHHHHH----CSCEEEECSSCH-HHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHH
T ss_pred cCCCCCCHHHHHHc----CCEEEEEeCCCH-HHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHH
Confidence 45789999999988 899999999988 8888888877 5 44445442113456679999999
Q ss_pred HHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 118 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 118 e~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
+++|++|++|+||||+..|+++|+++||.++++.+.
T Consensus 198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~ 233 (253)
T 2g80_A 198 RDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRP 233 (253)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCT
T ss_pred HHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCC
Confidence 999999999999999999999999999999999873
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=150.30 Aligned_cols=120 Identities=10% Similarity=-0.012 Sum_probs=100.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|++.++++.|++.|++++++||... ......++.+++..+|+.+. .. .+++|..|..+++++|++|++
T Consensus 86 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 164 (225)
T 3d6j_A 86 ANTILFPDTLPTLTHLKKQGIRIGIISTKYR-FRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEE 164 (225)
T ss_dssp GGCEECTTHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGG
T ss_pred ccCccCcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHH
Confidence 4567899999999999999999999999987 88899999999999998752 22 344569999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|++|||+.+|+.+|+.+|+.++++.+|...... +....+|+++.+.
T Consensus 165 ~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~---l~~~~ad~v~~~~ 210 (225)
T 3d6j_A 165 VLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQE---FQAYPYDRIISTL 210 (225)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEETTSSCCTTG---GGGSCCSEEESSG
T ss_pred eEEEcCCHHHHHHHHHCCCeEEEECCCCCChHH---HhhcCCCEEECCH
Confidence 999999999999999999999999988654433 3334578888653
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.4e-17 Score=155.17 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=93.5
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH------cCCCCCCcceee-----cCCCCHHHHHHHHHHcCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL------INLNQYFSNKEI-----YPGQKTTHFESLKKATGI 122 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~------lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi 122 (538)
..++||+.++|+.|++ |++++++||++. ..+...++. +|+..+|+.+.. ..+++|++|..+++++|+
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 165 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNP-YVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGM 165 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCH-HHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCC
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCH-HHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCC
Confidence 4689999999999999 999999999987 888888888 799899997622 244567899999999999
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
+|++|++|||+.+|+.+|+++|+.+++++++....+.++.
T Consensus 166 ~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~ 205 (211)
T 2i6x_A 166 KPEETLFIDDGPANVATAERLGFHTYCPDNGENWIPAITR 205 (211)
T ss_dssp CGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHHHHHH
T ss_pred ChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999988776665554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.1e-17 Score=153.13 Aligned_cols=114 Identities=18% Similarity=0.078 Sum_probs=95.9
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.+ |+.|+++ ++++++||++. ..++..++.+|+..+|+.+.. . .+++|++|..+++++| |++|
T Consensus 72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~ 146 (201)
T 2w43_A 72 NLKAYEDTKY-LKEISEI-AEVYALSNGSI-NEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEA 146 (201)
T ss_dssp TCEECGGGGG-HHHHHHH-SEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCC
T ss_pred ccccCCChHH-HHHHHhC-CeEEEEeCcCH-HHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcE
Confidence 3678999999 9999999 99999999988 889999999999999997622 2 3456799999999999 9999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
++|||+.+|+.+|+++|+.++++.++...... + ...+++++.+.
T Consensus 147 ~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~---~-~~~~~~~~~~~ 190 (201)
T 2w43_A 147 FLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDP---I-GGKPDVIVNDF 190 (201)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECSSSCCCCT---T-SCCCSEEESSH
T ss_pred EEEeCCHHHhHHHHHCCCEEEEECCCCCCccc---c-CCCCCEEECCH
Confidence 99999999999999999999999986543221 1 34688887663
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=150.28 Aligned_cols=116 Identities=11% Similarity=0.105 Sum_probs=96.7
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCC---cHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTS---EILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~---~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
.++|++.++|+.|+++|++++++||.. . ...+..++.+|+..+|+.+.. ..+++|+.|..+++++|++|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPG-SYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCH-HHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccch-hHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 469999999999999999999999998 7 888899999999999997622 2346679999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++|||+. +|+.+|+++|+.++++.++..... +. ..+++++.+..
T Consensus 178 ~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~----~~-~~~~~~~~~~~ 223 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARKVGMWAVWINQEGDKVR----KL-EERGFEIPSIA 223 (235)
T ss_dssp EEEEESCTTTTHHHHHHTTSEEEEECTTCCSCE----EE-ETTEEEESSGG
T ss_pred eEEECCChHHHHHHHHHCCCEEEEECCCCCCcc----cC-CCCcchHhhHH
Confidence 99999999 999999999999999998742211 11 23677765543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.70 E-value=8.3e-17 Score=148.65 Aligned_cols=97 Identities=12% Similarity=0.158 Sum_probs=84.8
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcEEE
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDMVF 129 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~L~ 129 (538)
.++|++.++|+.|+++|++++++||.+. .++..++.+++..+|+.+.. .++++|+.|..+++++|++ +|++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND--QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT--HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH--HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 4899999999999999999999999854 57788999999999987621 2345679999999999998 9999
Q ss_pred EeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 130 FDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 130 IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
|||+.+|+.+|+++|+.++++.++..
T Consensus 158 iGD~~~Di~~a~~aG~~~~~~~~~~~ 183 (190)
T 2fi1_A 158 IGDRPIDIEAGQAAGLDTHLFTSIVN 183 (190)
T ss_dssp EESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred EcCCHHHHHHHHHcCCeEEEECCCCC
Confidence 99999999999999999999987653
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-17 Score=156.62 Aligned_cols=127 Identities=14% Similarity=0.089 Sum_probs=98.7
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCC--------------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT-------------- 80 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~-------------- 80 (538)
.+|+++||+||||+...-..+ .........++||+.++|+.|+++|++++|+||+
T Consensus 13 ~~k~~~~D~Dgtl~~~~~~~~-----------~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~ 81 (176)
T 2fpr_A 13 SQKYLFIDRDGTLISEPPSDF-----------QVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFD 81 (176)
T ss_dssp CCEEEEECSBTTTBCCC--CC-----------CCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHH
T ss_pred cCcEEEEeCCCCeEcCCCCCc-----------CcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhh
Confidence 489999999999976310000 0111335789999999999999999999999998
Q ss_pred -CcHHHHHHHHHHcCCCCCCcceee----------cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 81 -SEILHAKQILNLINLNQYFSNKEI----------YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 81 -~~p~~~~~~L~~lgL~~~Fd~ie~----------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
.. ..+...++.+|+. |+.+.. ..+++|++|..+++++|++|++|+||||+..|+.+|+++|+.+++
T Consensus 82 ~~~-~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~ 158 (176)
T 2fpr_A 82 GPH-NLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLR 158 (176)
T ss_dssp HHH-HHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEE
T ss_pred hhH-HHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEE
Confidence 45 7788899999986 776521 123456889999999999999999999999999999999999999
Q ss_pred ECCCCC
Q psy8912 150 SWLMMS 155 (538)
Q Consensus 150 V~~G~~ 155 (538)
+.++..
T Consensus 159 v~~~~~ 164 (176)
T 2fpr_A 159 YDRETL 164 (176)
T ss_dssp CBTTTB
T ss_pred EcCCcc
Confidence 988754
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=146.81 Aligned_cols=112 Identities=11% Similarity=0.046 Sum_probs=95.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecC--CCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYP--GQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~--~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|++.++|+.|++.|++++++||+.. .... .++.+++..+|+.+. ... +++|+.|..+++++|++|++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCch-HHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 4567899999999999999999999999988 7788 899999988888652 222 34479999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|++|||+.+|+.+|+++|+.++++.++. . .+++++.+..
T Consensus 160 ~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~----------~a~~v~~~~~ 198 (207)
T 2go7_A 160 TYYIGDRTLDVEFAQNSGIQSINFLEST-Y----------EGNHRIQALA 198 (207)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEESSCCS-C----------TTEEECSSTT
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEecCC-C----------CCCEEeCCHH
Confidence 9999999999999999999999998876 2 4677776543
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-17 Score=156.26 Aligned_cols=106 Identities=21% Similarity=0.219 Sum_probs=88.0
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
..++||+.++|+.|+++|++++++||++. ...+..+.. +|+..+|+.+.. ..+++|+.|..+++++|++|++|
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 168 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT 168 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCCh-HHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 57899999999999999999999999977 555555555 677778887622 23455689999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhH
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLK 160 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~ 160 (538)
++|||+.+|+.+|+++|+.++++.++....+.+
T Consensus 169 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l 201 (206)
T 2b0c_A 169 VFFDDNADNIEGANQLGITSILVKDKTTIPDYF 201 (206)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECCSTTHHHHHH
T ss_pred EEeCCCHHHHHHHHHcCCeEEEecCCchHHHHH
Confidence 999999999999999999999998876544433
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.3e-16 Score=144.88 Aligned_cols=117 Identities=20% Similarity=0.241 Sum_probs=95.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++|++.++|+.|++.|++++++||... ....++.+++..+|+.+. .. .+++|+.|..+++++|++|++|
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 165 (221)
T 2wf7_A 89 PADVYPGILQLLKDLRSNKIKIALASASKN---GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEcCcHH---HHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence 457899999999999999999999999833 677888999999998752 22 2345689999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHH
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVN 181 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~ 181 (538)
++|||+.+|+.+|+++|+.+++++. .. .++ .+++++.+..+..+.
T Consensus 166 i~iGD~~nDi~~a~~aG~~~~~~~~----~~---~~~--~a~~v~~~~~el~~~ 210 (221)
T 2wf7_A 166 IGLEDSQAGIQAIKDSGALPIGVGR----PE---DLG--DDIVIVPDTSHYTLE 210 (221)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESC----HH---HHC--SSSEEESSGGGCCHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEECC----HH---Hhc--cccchhcCHHhCCHH
Confidence 9999999999999999999999843 12 233 688988775554443
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-16 Score=154.48 Aligned_cols=122 Identities=13% Similarity=0.050 Sum_probs=101.0
Q ss_pred cCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCC--
Q psy8912 51 GTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGI-- 122 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi-- 122 (538)
.....++||+.++|+.|++. |++++++||+.. ..+...++.+++. +|+.+ +. .++++|+.|..+++++|+
T Consensus 110 ~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~-~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~ 187 (275)
T 2qlt_A 110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTR-DMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPI 187 (275)
T ss_dssp CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCH-HHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCH-HHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence 35577899999999999999 999999999988 8889999999986 47655 11 234567999999999999
Q ss_pred -----CCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 123 -----EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 123 -----~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
+|++|++|||+.+|+.+|+++|+.+++|.+|.... .+....+|+++.+..+.
T Consensus 188 ~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~----~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 188 NEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLD----FLKEKGCDIIVKNHESI 244 (275)
T ss_dssp CSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHH----HHTTSSCSEEESSGGGE
T ss_pred cccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHH----HHhhCCCCEEECChHHc
Confidence 99999999999999999999999999999876532 23445689988765443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=148.23 Aligned_cols=127 Identities=16% Similarity=0.095 Sum_probs=99.5
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---e--ecC--CCCHHHHHHHHHHcCCCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---E--IYP--GQKTTHFESLKKATGIEY 124 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e--~~~--~~Kp~~f~~ale~lgi~P 124 (538)
...++|++.++|+.|+. +++++||+.. ..+...++.+++..+| +.+ + ..+ ++||..|..+++++|++|
T Consensus 85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~ 160 (229)
T 2fdr_A 85 DVKIIDGVKFALSRLTT---PRCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP 160 (229)
T ss_dssp HCCBCTTHHHHHHHCCS---CEEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred CCccCcCHHHHHHHhCC---CEEEEECCCh-hHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCCh
Confidence 46789999999999985 8999999988 8889999999999999 765 1 134 567799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc-hHhHHhhCCCCCCEEEeCCchhhHHhhh
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS-GRLKEATGIDYKDMIYFDDEQEHVNDIS 184 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~-~~~~~~l~~~~~d~Ii~d~~~~~~~~i~ 184 (538)
++|++|||+.+|+.+|+++|+.++++.++... ......+....+|+++.+..+ +...+.
T Consensus 161 ~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~e-l~~~l~ 220 (229)
T 2fdr_A 161 DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQD-LPAVIA 220 (229)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGG-HHHHHH
T ss_pred hHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHH-HHHHHH
Confidence 99999999999999999999999999987653 111112222347888876443 333333
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-16 Score=152.71 Aligned_cols=128 Identities=9% Similarity=-0.062 Sum_probs=101.9
Q ss_pred CCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH----------
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---------- 83 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---------- 83 (538)
.++++++||+|||||.... + ........++||+.++|+.|+++|++++|+||++..
T Consensus 29 ~~~k~i~~D~DGtl~~~~~--y------------~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~ 94 (218)
T 2o2x_A 29 PHLPALFLDRDGTINVDTD--Y------------PSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAF 94 (218)
T ss_dssp SSCCCEEECSBTTTBCCCS--C------------TTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHH
T ss_pred hcCCEEEEeCCCCcCCCCc--c------------cCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHH
Confidence 4589999999999986310 0 011234689999999999999999999999999641
Q ss_pred ----HHHHHHHHHcCCCCCCccee-----------------ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhh
Q psy8912 84 ----LHAKQILNLINLNQYFSNKE-----------------IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 84 ----~~~~~~L~~lgL~~~Fd~ie-----------------~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~ 142 (538)
..+...++.+|+. |+.+- ..++++|.+|..+++++|++|++|+||||+.+|+.+|++
T Consensus 95 ~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~ 172 (218)
T 2o2x_A 95 AAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR 172 (218)
T ss_dssp HHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH
Confidence 3677788999874 33220 123455689999999999999999999999999999999
Q ss_pred cCCeE-EEECCCCCch
Q psy8912 143 LGVTC-IHSWLMMSSG 157 (538)
Q Consensus 143 aG~~t-I~V~~G~~~~ 157 (538)
+|+.+ ++|.+|....
T Consensus 173 aG~~~~i~v~~g~~~~ 188 (218)
T 2o2x_A 173 AGLAQGWLVDGEAAVQ 188 (218)
T ss_dssp TTCSEEEEETCCCEEE
T ss_pred CCCCEeEEEecCCCCc
Confidence 99999 9999987543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.66 E-value=8.4e-16 Score=150.03 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=90.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---ee--cCCCCHHHHHHHHHHcCCCC-
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---EI--YPGQKTTHFESLKKATGIEY- 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e~--~~~~Kp~~f~~ale~lgi~P- 124 (538)
....++||+.++|+.|+++|++++++||.+. ..+...++.+|+..+| +.+ +. .+++||..|..+++++|++|
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 178 (267)
T 1swv_A 100 RYASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPM 178 (267)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSG
T ss_pred cccccCccHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCC
Confidence 4567899999999999999999999999987 8888888888887775 654 22 23467799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
++|++|||+.+|+.+|+.+|+.+++|.+|..
T Consensus 179 ~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 179 NHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred cCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 9999999999999999999999999999875
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-16 Score=149.23 Aligned_cols=115 Identities=17% Similarity=0.141 Sum_probs=91.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CCccee---------e--c------CCCCHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFSNKE---------I--Y------PGQKTTHF 113 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~Fd~ie---------~--~------~~~Kp~~f 113 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+|+.. +|+.+. . . +.+||++|
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 467999999999999999999999999988 88999999999973 776431 0 1 13578999
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
..+++++|+ ++|+||||+.+|+.+|+++|+ ++++..+...... . ..+++++.+..
T Consensus 163 ~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~-~----~~~~~~~~~~~ 217 (225)
T 1nnl_A 163 KLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQV-K----DNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHH-H----HHCSEEESCGG
T ss_pred HHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHH-H----hcCCeeecCHH
Confidence 999999998 799999999999999999999 8888554322221 1 24678776643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.3e-17 Score=171.48 Aligned_cols=108 Identities=16% Similarity=0.095 Sum_probs=85.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCC--CcHHHHHHHHHHc--CCCCCCcceee-----cCCCCHHHHHHHHHHcCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRT--SEILHAKQILNLI--NLNQYFSNKEI-----YPGQKTTHFESLKKATGI 122 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~--~~p~~~~~~L~~l--gL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi 122 (538)
....++||+.++|+.|+++|++++|+||+ .. ......+... ++..+|+.+.. ..+++|++|+.+++++|+
T Consensus 97 ~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~ 175 (555)
T 3i28_A 97 SARKINRPMLQAALMLRKKGFTTAILTNTWLDD-RAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175 (555)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCC-STTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred hhcCcChhHHHHHHHHHHCCCEEEEEeCCCccc-cchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 34689999999999999999999999998 22 1122233333 67789998722 234567899999999999
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhH
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLK 160 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~ 160 (538)
+|++|+||||+.+|+.+|+++|+.++++.++.......
T Consensus 176 ~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~~~~~l 213 (555)
T 3i28_A 176 SPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKEL 213 (555)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCEEEECSSHHHHHHHH
T ss_pred ChhHEEEECCcHHHHHHHHHcCCEEEEECCCccHHHHH
Confidence 99999999999999999999999999998765544443
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-15 Score=141.39 Aligned_cols=104 Identities=16% Similarity=0.131 Sum_probs=90.1
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCc--hHHHHHHHhhcCCccccccceeec---------CCchHHHHHHHHHh
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTE--MLRAHQLVDLFNWNQHFDHKEIFP---------GQKTTHFANLKKAT 488 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~--~~~a~~~L~~lgL~~yFd~~~i~~---------~~k~~~~~kal~~l 488 (538)
.++.++||+.++|++|+++|++++|+|++.. ...++..|+.+|+.+||+...... .++++.|..+++++
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 3588999999999999999999999998865 147888999999999999433321 13466799999999
Q ss_pred CCCCCcEEEEecc-cccHHhHcccCCEEEEECCCCC
Q psy8912 489 GIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 489 gi~pee~l~~eDs-~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|++|+||||+ ..|+++|+++|+.++.|.++..
T Consensus 111 ~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~ 146 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEV 146 (189)
T ss_dssp TCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTT
T ss_pred CCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccc
Confidence 9999999999999 7999999999999999988754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.7e-16 Score=160.52 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=86.4
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---------------cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---------------~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++..++.+|+..+|+.+.. .+++||++|..
T Consensus 175 ~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~-~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~ 253 (317)
T 4eze_A 175 CDRMTLSPGLLTILPVIKAKGFKTAIISGGLD-IFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVD 253 (317)
T ss_dssp HHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred HhCCEECcCHHHHHHHHHhCCCEEEEEeCccH-HHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHH
Confidence 44678999999999999999999999999988 999999999999999885411 11346688999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus 254 ~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 254 LAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 9999999999999999999999999999997655
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.2e-16 Score=141.02 Aligned_cols=137 Identities=12% Similarity=0.079 Sum_probs=104.7
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||++...... . .......+.|++.++|+.|+++|++++++||++. ..++..++.+|
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~-~-----------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~g 74 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYT-E-----------HGETIKVFNVLDGIGIKLLQKMGITLAVISGRDS-APLITRLKELG 74 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEE-T-----------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCC-HHHHHHHHHTT
T ss_pred ceeEEEEecCcceECCceeec-C-----------CCceeeeecccHHHHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHcC
Confidence 479999999999986221000 0 0001123456788999999999999999999998 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+. ++++|+.|..+++++|++|++|+||||+.+|+.+|+++|+.++ +.++ ... ... .+++++.+
T Consensus 75 l~~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~-~~~~--~~~-~~~----~a~~v~~~ 142 (162)
T 2p9j_A 75 VEEIYTG----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVA-VRNA--VEE-VRK----VAVYITQR 142 (162)
T ss_dssp CCEEEEC----C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTS--CHH-HHH----HCSEECSS
T ss_pred CHhhccC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE-ecCc--cHH-HHh----hCCEEecC
Confidence 9888875 5678899999999999999999999999999999999999865 4333 222 222 36788776
Q ss_pred Cc
Q psy8912 175 DE 176 (538)
Q Consensus 175 ~~ 176 (538)
..
T Consensus 143 ~~ 144 (162)
T 2p9j_A 143 NG 144 (162)
T ss_dssp CS
T ss_pred CC
Confidence 44
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.9e-16 Score=150.12 Aligned_cols=96 Identities=21% Similarity=0.111 Sum_probs=81.4
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eecC--CCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIYP--GQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~~--~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||++. .++..++.+|+.++|+.+ +..+ +++|++|..+++++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~--~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP--RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH--HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH--HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 457899999999999999999999999854 478899999999999976 2222 334578999999999998
Q ss_pred EEEeCCcc-cHHHHhhcCCeEEEECCC
Q psy8912 128 VFFDDEER-NSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 128 L~IGDs~~-DI~aAk~aG~~tI~V~~G 153 (538)
+||||+.. |+.+|+++|+.++++.++
T Consensus 168 ~~vgD~~~~Di~~a~~aG~~~i~v~~~ 194 (220)
T 2zg6_A 168 VHVGDIYELDYIGAKRSYVDPILLDRY 194 (220)
T ss_dssp EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence 99999998 999999999999999765
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-16 Score=154.88 Aligned_cols=136 Identities=13% Similarity=0.081 Sum_probs=93.7
Q ss_pred CCceEEEeCCCCCChhhHhh-----hh-chh------HHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHD-----LV-APF------KKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~-----~i-~~~------~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
++|+|+||+||||++..-.. .. +.. ...+..+...+.....++|++.++|+.|+++|++++|+||++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 48999999999996633111 00 000 0111111111122234678999999999999999999999976
Q ss_pred HHHHHHHHHHcCCCCCCcce----e--ec--CCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 83 ILHAKQILNLINLNQYFSNK----E--IY--PGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 83 p~~~~~~L~~lgL~~~Fd~i----e--~~--~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
...+..++. +.++|+.+ . .. .+++|++|..+++++|+ |+||||+..|+++|+++|+.+|+|.+|.
T Consensus 116 -~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~ 188 (211)
T 2b82_A 116 -TKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRAS 188 (211)
T ss_dssp -CSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred -HHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence 444444544 33445443 0 12 33445789999999998 9999999999999999999999999887
Q ss_pred Cch
Q psy8912 155 SSG 157 (538)
Q Consensus 155 ~~~ 157 (538)
...
T Consensus 189 ~~~ 191 (211)
T 2b82_A 189 NST 191 (211)
T ss_dssp TCS
T ss_pred CCc
Confidence 543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.62 E-value=7.1e-16 Score=146.59 Aligned_cols=101 Identities=9% Similarity=0.129 Sum_probs=89.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCchHHHHHHHHHhCCCCCcEEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k~~~~~kal~~lgi~pee~l~ 497 (538)
...++||+.++|++|++ |++++++|++++. .++..|+++|+.+||+...... .++++.|+++++++|++|++|++
T Consensus 82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~-~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~ 159 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSS-SYPLYITTTKDTS-TAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp SCEECTTHHHHHHHHHT-TSCEEEEEEEEHH-HHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHH-HHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEE
Confidence 46789999999999999 9999999988654 7788999999999999543332 25677799999999999999999
Q ss_pred EecccccHHhHcccCCEEEEECCCCC
Q psy8912 498 FDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 498 ~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|||+.+|+++|+++|+.+|+|.||..
T Consensus 160 vgDs~~Di~~a~~aG~~~i~v~~~~~ 185 (210)
T 2ah5_A 160 IGDTKFDMLGARETGIQKLAITWGFG 185 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred ECCCHHHHHHHHHCCCcEEEEcCCCC
Confidence 99999999999999999999999865
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.62 E-value=8.8e-16 Score=145.41 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=91.1
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++++|+++.. .+...++.+|+.+|||...... .++++.|+++++++|++|++
T Consensus 81 ~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~-~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 81 ELLKENPGVREALEFVKSKRIKLALATSTPQR-EALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred HhcccCccHHHHHHHHHHcCCCcccccCCcHH-HHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 34678999999999999999999999998754 7888999999999999432221 24577799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEE-EECCCCCHH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCI-HVKDGMSHS 525 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i-~V~dg~t~~ 525 (538)
|+||||+.+|+++|+++|+.+| +|.+|.+..
T Consensus 160 ~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~ 191 (216)
T 3kbb_A 160 VVVFEDSKSGVEAAKSAGIERIYGVVHSLNDG 191 (216)
T ss_dssp EEEEECSHHHHHHHHHTTCCCEEEECCSSSCC
T ss_pred eEEEecCHHHHHHHHHcCCcEEEEecCCCCCH
Confidence 9999999999999999999987 699987644
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-15 Score=141.26 Aligned_cols=112 Identities=21% Similarity=0.269 Sum_probs=88.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee--------------c-CCCCHHHHHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI--------------Y-PGQKTTHFESLK 117 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~--------------~-~~~Kp~~f~~al 117 (538)
...++|++.++|+.|+++|++++++||+.. ..+...++.+++..+|+.... . +.+||..+..++
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 152 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 152 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence 456789999999999999999999999877 777888899998777654210 1 235678999999
Q ss_pred HHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 118 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 118 e~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+++|++|++|++|||+.+|+.+|+.+|+. +++. ... ..+ ..+++++.+
T Consensus 153 ~~lgi~~~~~~~iGD~~~Di~~~~~ag~~-~~~~---~~~-~~~----~~a~~v~~~ 200 (211)
T 1l7m_A 153 KIEGINLEDTVAVGDGANDISMFKKAGLK-IAFC---AKP-ILK----EKADICIEK 200 (211)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHCSEE-EEES---CCH-HHH----TTCSEEECS
T ss_pred HHcCCCHHHEEEEecChhHHHHHHHCCCE-EEEC---CCH-HHH----hhcceeecc
Confidence 99999999999999999999999999996 4443 122 221 257888765
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=7.1e-16 Score=141.34 Aligned_cols=118 Identities=10% Similarity=0.083 Sum_probs=92.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||++....... .. .......+.+ ..+|+.|+++|++++++||++. ..++..++.+|
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~--~~--------~~~~~~~~~~--~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~g 69 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQ--TG--------NEWKKFNTSD--SAGIFWAHNKGIPVGILTGEKT-EIVRRRAEKLK 69 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECS--SS--------CEEEEEEGGG--HHHHHHHHHTTCCEEEECSSCC-HHHHHHHHHTT
T ss_pred cceEEEEcCCCceEcCcEEEcC--CC--------cEEEEecCCh--HHHHHHHHHCCCEEEEEeCCCh-HHHHHHHHHcC
Confidence 4899999999999763210000 00 0000001111 1379999999999999999998 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+..+|+. .++||+.|..+++++|++|++|+||||+.+|+.+|+++|+.++.
T Consensus 70 l~~~~~~----~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 120 (164)
T 3e8m_A 70 VDYLFQG----VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP 120 (164)
T ss_dssp CSEEECS----CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC
T ss_pred CCEeecc----cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc
Confidence 9988887 36788999999999999999999999999999999999997553
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.7e-15 Score=138.10 Aligned_cols=107 Identities=11% Similarity=0.109 Sum_probs=88.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch--------------HHHHHHHhhcC--Cccccccc----ee--ecCCch
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM--------------LRAHQLVDLFN--WNQHFDHK----EI--FPGQKT 478 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--------------~~a~~~L~~lg--L~~yFd~~----~i--~~~~k~ 478 (538)
.+.++||+.++|++|+++|++++|+|+++.. +.++..|+.+| +..+|.+. .. ...+++
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSS
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCH
Confidence 4779999999999999999999999988741 36678899999 66665311 11 122567
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
+.|+++++++|++|++|+||||+.+|+++|+++|+.+++|.+|......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~ 153 (179)
T 3l8h_A 105 GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTL 153 (179)
T ss_dssp HHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhh
Confidence 7899999999999999999999999999999999999999999765543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=141.13 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=83.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc-ceeec--C------CCCHHHHHHHHHHcCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS-NKEIY--P------GQKTTHFESLKKATGI 122 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd-~ie~~--~------~~Kp~~f~~ale~lgi 122 (538)
....++||+.++|+.|+++ ++++|+||++. ..++..++.+|+..+|+ .+... . .++|..|..+++++++
T Consensus 66 ~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~ 143 (206)
T 1rku_A 66 ATLKPLEGAVEFVDWLRER-FQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 143 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred HhcCCCccHHHHHHHHHhc-CcEEEEECChH-HHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHh
Confidence 4678899999999999999 99999999988 88999999999999994 44221 1 2677999999999999
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
.|++|+||||+.+|+.+|+++|+.++
T Consensus 144 ~~~~~~~iGD~~~Di~~a~~aG~~~~ 169 (206)
T 1rku_A 144 LYYRVIAAGDSYNDTTMLSEAHAGIL 169 (206)
T ss_dssp TTCEEEEEECSSTTHHHHHHSSEEEE
T ss_pred cCCEEEEEeCChhhHHHHHhcCccEE
Confidence 99999999999999999999999865
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=148.04 Aligned_cols=101 Identities=12% Similarity=0.186 Sum_probs=87.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|+++|++|++.. +..+|+++|+.+||+.+.... .+.++.|+++++++|++|++|
T Consensus 93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 346899999999999999999999998753 467899999999999432211 145777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|||||+.+||++|++||+++|+|++|.+.
T Consensus 170 l~VgDs~~di~aA~~aG~~~I~V~~g~~~ 198 (243)
T 4g9b_A 170 IGIEDAQAGIDAINASGMRSVGIGAGLTG 198 (243)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESTTCCS
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCCc
Confidence 99999999999999999999999998653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-15 Score=146.79 Aligned_cols=93 Identities=10% Similarity=0.118 Sum_probs=76.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee-c---------CCCCHH-HHH---
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI-Y---------PGQKTT-HFE--- 114 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~-~---------~~~Kp~-~f~--- 114 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++ |+..+ +.+ +. . +++.|. ++.
T Consensus 74 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 74 EDAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred cCCCCCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence 3467999999999999999999999999987 78888887 77555 554 11 1 233345 344
Q ss_pred ----HHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 115 ----SLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 115 ----~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
.++++++++|++|+||||+.+|+.+|+++|+.++
T Consensus 150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence 8899999999999999999999999999999875
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-15 Score=140.91 Aligned_cols=136 Identities=14% Similarity=0.107 Sum_probs=104.5
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||++.... +.+ .......+.+...++|+.|+++|++++++||++. ..+...++.+|
T Consensus 7 ~ik~i~~DlDGTL~~~~~~--~~~----------~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~-~~~~~~~~~lg 73 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLH--YDA----------NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDS-PILRRRIADLG 73 (180)
T ss_dssp GCCEEEEECTTTTSCSEEE--EET----------TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCC-HHHHHHHHHHT
T ss_pred CCeEEEEeCCCCcCCCCee--ecc----------CcceeeeeccchHHHHHHHHHCCCeEEEEeCCCc-HHHHHHHHHcC
Confidence 4899999999999863210 000 0000112445677999999999999999999998 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+. ..+||..+..+++++|++|++|++|||+.+|+.+++++|+.++. .++ .. ... ..+|+++.+
T Consensus 74 l~~~~~~----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~--~~-~~~----~~ad~v~~~ 141 (180)
T 1k1e_A 74 IKLFFLG----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADA--PI-YVK----NAVDHVLST 141 (180)
T ss_dssp CCEEEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTS--CH-HHH----TTSSEECSS
T ss_pred CceeecC----CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-CCc--cH-HHH----hhCCEEecC
Confidence 9888865 46788999999999999999999999999999999999998663 222 22 221 257888876
Q ss_pred C
Q psy8912 175 D 175 (538)
Q Consensus 175 ~ 175 (538)
.
T Consensus 142 ~ 142 (180)
T 1k1e_A 142 H 142 (180)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-15 Score=160.30 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=85.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-e---------ec-----CCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-E---------IY-----PGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e---------~~-----~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++..++.+|+..+|+.. + .. +++||+.|..
T Consensus 252 ~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~-~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~ 330 (415)
T 3p96_A 252 AGQLELMPGARTTLRTLRRLGYACGVVSGGFR-RIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALRE 330 (415)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred HHhCccCccHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHH
Confidence 34578999999999999999999999999988 9999999999998887642 0 01 2346688999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 331 ~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 331 FAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 9999999999999999999999999999997664
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-15 Score=142.31 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=101.3
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||++....... ... ......+.++ .+|+.|+++|++++|+||++. ..++..++.+|
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~--~~~--------~~~~~~~~~~--~~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~lg 84 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFME--DGS--------EIKTFNTLDG--QGIKMLIASGVTTAIISGRKT-AIVERRAKSLG 84 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEET--TSC--------EEEEEEHHHH--HHHHHHHHTTCEEEEECSSCC-HHHHHHHHHHT
T ss_pred hCCEEEEcCCCCcCCccEeecc--CCc--------EeeeeccccH--HHHHHHHHCCCEEEEEECcCh-HHHHHHHHHcC
Confidence 4899999999999774311000 000 0000011111 189999999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+.+ .+||+.+..+++++|++|++|++|||+.+|+.+++++|+.++ +.. ..... . ..+|+++.+
T Consensus 85 l~~~f~~~----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~-~~~--~~~~~-~----~~ad~v~~~ 152 (189)
T 3mn1_A 85 IEHLFQGR----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMA-VAN--AASFV-R----EHAHGITRA 152 (189)
T ss_dssp CSEEECSC----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTT--SCHHH-H----HTSSEECSS
T ss_pred CHHHhcCc----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEE-eCC--ccHHH-H----HhCCEEecC
Confidence 99999874 778999999999999999999999999999999999999743 333 22222 2 146788776
Q ss_pred C
Q psy8912 175 D 175 (538)
Q Consensus 175 ~ 175 (538)
.
T Consensus 153 ~ 153 (189)
T 3mn1_A 153 Q 153 (189)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-15 Score=144.65 Aligned_cols=136 Identities=7% Similarity=0.002 Sum_probs=101.9
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+|+||+||||++...... + .......+.+.....|+.|+++|++++|+||++. ..++.+++.+|
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~-~-----------~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~-~~~~~~l~~lg 90 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMG-N-----------QGEELKTFHTRDGYGVKALMNAGIEIAIITGRRS-QIVENRMKALG 90 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEEC-T-----------TSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHHTT
T ss_pred CCCEEEEcCCCCcCCCcEEEc-c-----------CchhhheeecccHHHHHHHHHCCCEEEEEECcCH-HHHHHHHHHcC
Confidence 389999999999987321100 0 0000112223344459999999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+.. ++||..+..+++++|++|++|++|||+.+|+.+++++|+.++ +.++ .... +. .+++|+..
T Consensus 91 i~~~~~~~----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va-~~na--~~~~-~~----~ad~v~~~ 158 (195)
T 3n07_A 91 ISLIYQGQ----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVC-VADG--HPLL-AQ----RANYVTHI 158 (195)
T ss_dssp CCEEECSC----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEE-CTTS--CHHH-HH----HCSEECSS
T ss_pred CcEEeeCC----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEE-ECCh--HHHH-HH----hCCEEEcC
Confidence 99888763 678899999999999999999999999999999999998743 4332 2222 22 46777765
Q ss_pred C
Q psy8912 175 D 175 (538)
Q Consensus 175 ~ 175 (538)
.
T Consensus 159 ~ 159 (195)
T 3n07_A 159 K 159 (195)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-15 Score=140.35 Aligned_cols=98 Identities=13% Similarity=0.003 Sum_probs=79.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC-C
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY-K 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p-e 493 (538)
....++||+.++|++|+++|++++|+|++.+. .+.. ..+ .||+...... .++++.|+++++++|+.| +
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~-~~~~---~~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 106 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEA-LSTP---LAA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLE 106 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHH-HHHH---HHT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHH-HHHH---hcC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 34679999999999999999999999988654 4433 333 4677433222 245777999999999976 8
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|+||||+.+||++|++||+.+|+|.||.+
T Consensus 107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 107 GCVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp TCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred cEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 999999999999999999999999999864
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.7e-15 Score=138.55 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=86.6
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC--CCCcceee---------cCCCC--HH-HHHHHHHH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKEI---------YPGQK--TT-HFESLKKA 119 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~--~~Fd~ie~---------~~~~K--p~-~f~~ale~ 119 (538)
..++||+.++|+.|+++|++++++||+.. ..++..++.+|+. .+|..... ...++ |. .+..+++.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLS-ESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 45899999999999999999999999988 8999999999984 34542100 12223 33 34555566
Q ss_pred cCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 120 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 120 lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|++|++|++|||+.+|+.++ ++|+.++++.++........ ...+|+++.+.
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~---~~~ad~v~~~~ 211 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKV---INLSKYVARNV 211 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHH---HHHCSEEESSH
T ss_pred hCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHH---HhhcceeeCCH
Confidence 799999999999999999998 68999888876654322211 12478887653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=3.1e-15 Score=142.22 Aligned_cols=136 Identities=14% Similarity=0.172 Sum_probs=100.7
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+|+||+||||++...... +. ........+.++. .|+.|+++|++++|+||++. ..++..++.+|
T Consensus 18 ~ik~vifD~DGtL~~~~~~~~--~~--------~~~~~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~-~~~~~~l~~lg 84 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLHID--NH--------GNELKSFHVQDGM--GLKLLMAAGIQVAIITTAQN-AVVDHRMEQLG 84 (191)
T ss_dssp TCSEEEECSTTTTBCSCCEEC--TT--------CCEECCBCHHHHH--HHHHHHHTTCEEEEECSCCS-HHHHHHHHHHT
T ss_pred cCCEEEEeCCCCCCCCceeec--CC--------chhhhhccccChH--HHHHHHHCCCeEEEEeCcCh-HHHHHHHHHcC
Confidence 489999999999987321000 00 0000011111222 49999999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+.+ ++||+.+..+++++|++|++|+||||+.+|+.+++++|+.+ .+..+ .... . ..+|+++.+
T Consensus 85 l~~~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~-~~~~~--~~~~-~----~~ad~v~~~ 152 (191)
T 3n1u_A 85 ITHYYKGQ----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGV-AVSNA--VPQV-L----EFADWRTER 152 (191)
T ss_dssp CCEEECSC----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTC--CHHH-H----HHSSEECSS
T ss_pred CccceeCC----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEE-EeCCc--cHHH-H----HhCCEEecC
Confidence 99888873 67899999999999999999999999999999999999986 34332 2222 2 146777766
Q ss_pred C
Q psy8912 175 D 175 (538)
Q Consensus 175 ~ 175 (538)
.
T Consensus 153 ~ 153 (191)
T 3n1u_A 153 T 153 (191)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.2e-15 Score=140.63 Aligned_cols=94 Identities=10% Similarity=0.123 Sum_probs=80.7
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---------------cCCCCHHHHHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGQKTTHFESLKKA 119 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---------------~~~~Kp~~f~~ale~ 119 (538)
.++||+.++|+.|+++|++++|+||+.. ..++.+++.+|+..+|..... .+..|+..+..++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNS-FVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 5799999999999999999999999988 999999999999876653210 112355779999999
Q ss_pred cC---CCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 120 TG---IEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 120 lg---i~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+| ++|++|++|||+.+|+.+++.+|+.++.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 99 9999999999999999999999987653
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.56 E-value=9.6e-15 Score=143.38 Aligned_cols=71 Identities=10% Similarity=0.052 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 106 PGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 106 ~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++++|++|..+++++|++|++|+||||+ .+|+.+|+++|+.+++|.+|......+... ...||+++.+..+
T Consensus 182 ~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~-~~~~d~v~~~l~e 253 (264)
T 1yv9_A 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTL-PTPPTYVVDSLDE 253 (264)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTC-SSCCSEEESSGGG
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhc-CCCCCEEEecHHH
Confidence 4556689999999999999999999999 599999999999999999988654332221 2368998876543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.5e-15 Score=142.02 Aligned_cols=136 Identities=9% Similarity=0.025 Sum_probs=102.0
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||.+....... ... ......+.++. +|+.|+++|++++|+||++. ..++.+++.+|
T Consensus 48 ~ik~viFDlDGTL~Ds~~~~~~--~~~--------~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~-~~~~~~l~~lg 114 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGLIYMGN--QGE--------ELKAFNVRDGY--GIRCLITSDIDVAIITGRRA-KLLEDRANTLG 114 (211)
T ss_dssp TCSEEEECCTTTTSSSEEEEET--TSC--------EEEEEEHHHHH--HHHHHHHTTCEEEEECSSCC-HHHHHHHHHHT
T ss_pred CCCEEEEeCCCCEECCHHHHhh--hhH--------HHHHhccchHH--HHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcC
Confidence 5899999999999764311000 000 00000111111 89999999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+.+ ++||+.++.+++++|++|++|++|||+.+|+.+++++|+.++ +..+. .. ....+|+|+.+
T Consensus 115 i~~~f~~~----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a-~~~~~--~~-----~~~~Ad~v~~~ 182 (211)
T 3ij5_A 115 ITHLYQGQ----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVA-VADAH--PL-----LLPKAHYVTRI 182 (211)
T ss_dssp CCEEECSC----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE-CTTSC--TT-----TGGGSSEECSS
T ss_pred Cchhhccc----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEE-eCCcc--HH-----HHhhCCEEEeC
Confidence 99999874 678999999999999999999999999999999999998754 33322 11 12357888876
Q ss_pred C
Q psy8912 175 D 175 (538)
Q Consensus 175 ~ 175 (538)
.
T Consensus 183 ~ 183 (211)
T 3ij5_A 183 K 183 (211)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=136.45 Aligned_cols=134 Identities=10% Similarity=-0.004 Sum_probs=97.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||++....... .... .....+.++. +|+.|+++|++++|+||++. ..++..++.+|
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~--~~~~--------~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~lg 77 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDS--DGRE--------FVSVHRGDGL--GIAALRKSGLTMLILSTEQN-PVVAARARKLK 77 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECT--TCCE--------EEEEEHHHHH--HHHHHHHTTCEEEEEESSCC-HHHHHHHHHHT
T ss_pred cCCEEEEeCCCCcCcCCEeecC--CccH--------hHhcccccHH--HHHHHHHCCCeEEEEECcCh-HHHHHHHHHcC
Confidence 3899999999999763211000 0000 0000011111 79999999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+. +|.. ..+||+.++.+++++|++|++|++|||+.+|+.+++++|+.++ +.. ...... . .+|+++.+
T Consensus 78 i~-~~~~----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~-~~~--~~~~~~-~----~ad~v~~~ 144 (176)
T 3mmz_A 78 IP-VLHG----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVA-VAS--AHDVVR-G----AARAVTTV 144 (176)
T ss_dssp CC-EEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTT--CCHHHH-H----HSSEECSS
T ss_pred Ce-eEeC----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEE-CCC--hhHHHH-H----hCCEEecC
Confidence 98 6654 3778899999999999999999999999999999999997643 333 222222 1 35777765
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=7.9e-15 Score=138.52 Aligned_cols=135 Identities=13% Similarity=0.100 Sum_probs=100.6
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
++|+|+||+||||++.... ..+ .......+ ..-..+|+.|+++|++++|+||++. ..++..++.+
T Consensus 25 ~ik~vifD~DGTL~~~~~~--~~~-----------~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~-~~~~~~l~~l 90 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIY--MGN-----------NGEELKAFNVRDGYGIRCALTSDIEVAIITGRKA-KLVEDRCATL 90 (188)
T ss_dssp TCSEEEECCCCCCBCSEEE--EET-----------TSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCC-HHHHHHHHHH
T ss_pred cCCEEEEeCCCCcCCCCEE--ecC-----------CCcEEEEeecccHHHHHHHHHCCCeEEEEeCCCh-HHHHHHHHHc
Confidence 5899999999999863210 000 00000000 0011389999999999999999998 8999999999
Q ss_pred CCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEe
Q psy8912 94 NLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYF 173 (538)
Q Consensus 94 gL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~ 173 (538)
|+..+|+. .++||..|..+++++|++|++|+||||+.+|+.+|+++|+.++. .++. ... ...+++++.
T Consensus 91 gl~~~~~~----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~--~~~-----~~~ad~v~~ 158 (188)
T 2r8e_A 91 GITHLYQG----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAH--PLL-----IPRADYVTR 158 (188)
T ss_dssp TCCEEECS----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSC--TTT-----GGGSSEECS
T ss_pred CCceeecC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcC--HHH-----HhcCCEEEe
Confidence 99888775 47789999999999999999999999999999999999998653 3322 111 124788887
Q ss_pred CC
Q psy8912 174 DD 175 (538)
Q Consensus 174 d~ 175 (538)
+.
T Consensus 159 ~~ 160 (188)
T 2r8e_A 159 IA 160 (188)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.55 E-value=6.6e-14 Score=135.91 Aligned_cols=71 Identities=10% Similarity=-0.028 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 106 PGQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 106 ~~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++++|++|..+++++|++|++|++|||+. +|+.+|+++|+.+++|.+|........ .....|++++.+..+
T Consensus 178 ~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~-~~~~~~~~~~~~l~~ 249 (259)
T 2ho4_A 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEE-KINPPPYLTCESFPH 249 (259)
T ss_dssp STTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGG-GSSSCCSEEESCHHH
T ss_pred cCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCccccc-ccCCCCCEEECCHHH
Confidence 45677999999999999999999999998 999999999999999999854322211 123568888876443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=138.69 Aligned_cols=104 Identities=16% Similarity=0.138 Sum_probs=90.7
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++|+|+++. ..++..|+++|+. ||+...... .++++.|+++++++|++|+
T Consensus 106 ~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~ 183 (240)
T 2hi0_A 106 QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPN-EAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRD 183 (240)
T ss_dssp SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGG
T ss_pred hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 44678999999999999999999999998864 4778899999998 999533322 2567889999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|++|||+.+|+++|+++|+.+|+|.+|...
T Consensus 184 ~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 214 (240)
T 2hi0_A 184 KCVYIGDSEIDIQTARNSEMDEIAVNWGFRS 214 (240)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEEESSSSSC
T ss_pred HeEEEcCCHHHHHHHHHCCCeEEEECCCCCc
Confidence 9999999999999999999999999998643
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.53 E-value=4.7e-14 Score=139.17 Aligned_cols=69 Identities=4% Similarity=-0.093 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|.+|..+++++|++|++|++|||+ .+|+.+|+++|+.+++|.+|......+... ...||+++.+..+
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~-~~~pd~~~~~l~~ 252 (264)
T 3epr_A 183 PNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDL-PIQPSYVLASLDE 252 (264)
T ss_dssp TSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGC-SSCCSEEESCGGG
T ss_pred CCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhc-CCCCCEEECCHHH
Confidence 45677999999999999999999999 699999999999999999998876655432 3468998877543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-14 Score=142.01 Aligned_cols=69 Identities=6% Similarity=0.044 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|..|..+++++|++|++|++|||+ .+|+.+|+.+|+.+++|.+|.......+.. ...||+++.+..+
T Consensus 184 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~-~~~~d~v~~~~~e 253 (266)
T 3pdw_A 184 PESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDD-MEKPTHAIDSLTE 253 (266)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTT-SCCCSEEESSGGG
T ss_pred CCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhc-CCCCCEEeCCHHH
Confidence 45588999999999999999999999 799999999999999999998765543221 2368998877543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-14 Score=151.72 Aligned_cols=124 Identities=11% Similarity=0.080 Sum_probs=103.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc--ceee----------------cCCCCHHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS--NKEI----------------YPGQKTTHFE 114 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd--~ie~----------------~~~~Kp~~f~ 114 (538)
...++||+.++|+.|+++|++++|+||++. ..+...++.+|+..+|+ .+.. .++++|++|.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~-~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 457889999999999999999999999988 89999999999999998 5511 1456679999
Q ss_pred HHHHHcC--------------CCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 115 SLKKATG--------------IEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 115 ~ale~lg--------------i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
.+++++| ++|++|+||||+..|+++|+++||.+|+|.+|.........+....+|+++.+..+
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~e 368 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHH
Confidence 9999999 99999999999999999999999999999998753222222333468888877544
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.2e-14 Score=135.80 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=87.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc--------------hHHHHHHHhhcCCccccccceee-------------
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE--------------MLRAHQLVDLFNWNQHFDHKEIF------------- 473 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~--------------~~~a~~~L~~lgL~~yFd~~~i~------------- 473 (538)
...++||+.++|++|+++|++++|+|++.. ...++..|+.+|+. |+.....
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~ 125 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQ 125 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBS
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCc
Confidence 477999999999999999999999998873 24778899999987 6532211
Q ss_pred ----cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE-EEECCCCCHH
Q psy8912 474 ----PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC-IHVKDGMSHS 525 (538)
Q Consensus 474 ----~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~-i~V~dg~t~~ 525 (538)
..+++..|.++++++|++|++|+||||+.+|+++|+++|+.+ ++|.+|....
T Consensus 126 ~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~ 182 (211)
T 2gmw_A 126 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPIT 182 (211)
T ss_dssp CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCC
T ss_pred cCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCcc
Confidence 124577899999999999999999999999999999999999 9999987543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.52 E-value=4.7e-15 Score=141.39 Aligned_cols=121 Identities=12% Similarity=-0.003 Sum_probs=88.7
Q ss_pred CCccCCCHHHHHHHhhhCCceEE---------------------------------EEcCCCcHHHHHHHHHHcC-CCCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVA---------------------------------AASRTSEILHAKQILNLIN-LNQY 98 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~Gikia---------------------------------IvTn~~~p~~~~~~L~~lg-L~~~ 98 (538)
...++|++.++++.|++.|++++ ++||.+. .....++.++ +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~~--~~~~~~~~~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDT--HGRGFYPACGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCCS--BSSTTCBCHHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCC--CCCCeeecchHHHHH
Confidence 45678999999999999999999 8888641 1111112222 2223
Q ss_pred Ccce-----eecCCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEE
Q psy8912 99 FSNK-----EIYPGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIY 172 (538)
Q Consensus 99 Fd~i-----e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii 172 (538)
|+.+ ...+++||..|+.+++++|++|++|++|||+ .+|+.+|+.+|+.+++|.+|....+..+. ....||+++
T Consensus 163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~-~~~~~~~v~ 241 (250)
T 2c4n_A 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS-MPFRPSWIY 241 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSS-CSSCCSEEE
T ss_pred HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhh-cCCCCCEEE
Confidence 3322 2345678899999999999999999999999 69999999999999999998766443321 125789988
Q ss_pred eCCc
Q psy8912 173 FDDE 176 (538)
Q Consensus 173 ~d~~ 176 (538)
.+..
T Consensus 242 ~~~~ 245 (250)
T 2c4n_A 242 PSVA 245 (250)
T ss_dssp SSGG
T ss_pred CCHH
Confidence 7643
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.2e-16 Score=145.36 Aligned_cols=90 Identities=8% Similarity=-0.020 Sum_probs=81.3
Q ss_pred CCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHcCCCC-CCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 53 LIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQ-YFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~lgL~~-~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
...++||+.++|+.|+++ |++++|+||++. ..++..++.+|+.+ +|+ ..+++++|++|++|++|
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~f~-------------~~~~~~l~~~~~~~~~v 138 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIK-MFKYCPYEKYAWVEKYFG-------------PDFLEQIVLTRDKTVVS 138 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCS-CCSSHHHHHHHHHHHHHC-------------GGGGGGEEECSCSTTSC
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCcc-chHHHHHHHhchHHHhch-------------HHHHHHhccCCccEEEE
Confidence 568999999999999999 999999999988 77788889998877 886 56788999999999999
Q ss_pred eCCccc----HHHHh-hcCCeEEEECCCCCc
Q psy8912 131 DDEERN----SHDVS-PLGVTCIHSWLMMSS 156 (538)
Q Consensus 131 GDs~~D----I~aAk-~aG~~tI~V~~G~~~ 156 (538)
||+..| +.+|+ ++|+.+|++.++...
T Consensus 139 gDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~ 169 (197)
T 1q92_A 139 ADLLIDDRPDITGAEPTPSWEHVLFTACHNQ 169 (197)
T ss_dssp CSEEEESCSCCCCSCSSCSSEEEEECCTTTT
T ss_pred CcccccCCchhhhcccCCCceEEEecCcccc
Confidence 999999 99999 999999999887653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=135.40 Aligned_cols=68 Identities=9% Similarity=0.086 Sum_probs=56.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHH----hhCCCCCCEEEeCC
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKE----ATGIDYKDMIYFDD 175 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~----~l~~~~~d~Ii~d~ 175 (538)
+++|..|..+++++|++|++|++|||+ .+|+.+|+++|+.+++|.+|........ .. ...||+++.+.
T Consensus 187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~-~~~~d~v~~~~ 259 (268)
T 3qgm_A 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERH-GLKPDYVFNSL 259 (268)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHH-TCCCSEEESSH
T ss_pred CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhcccc-CCCCCEEECCH
Confidence 345688999999999999999999999 5999999999999999999987665544 22 23689888764
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.50 E-value=4e-14 Score=134.82 Aligned_cols=103 Identities=17% Similarity=0.084 Sum_probs=88.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC-
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK- 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe- 493 (538)
....++||+.++|++|+++|++++++|++.. ..++..++.+|+.+||+...... .++++.|.++++++|++|+
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 178 (231)
T 3kzx_A 100 DNFMLNDGAIELLDTLKENNITMAIVSNKNG-ERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSK 178 (231)
T ss_dssp CCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCST
T ss_pred ccceECcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCccc
Confidence 4677899999999999999999999998864 47889999999999999433322 1456789999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+.+|+++|+++|+.+|+|.++..
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~ 208 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNI 208 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 999999999999999999999999977543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-14 Score=152.33 Aligned_cols=125 Identities=18% Similarity=0.190 Sum_probs=94.9
Q ss_pred cCCCCceEEEeCCCCCChhhHh-hhhchhHHHHHHHHhhhcCCC-ccCCCHHHHHHHhhhCCceEEEEcCCCc-------
Q psy8912 12 VKKFPKMVVFDLDYTLWPLHVH-DLVAPFKKIGQKVMDAKGTLI-KYYRGVPEILRYLKENKCLVAAASRTSE------- 82 (538)
Q Consensus 12 m~~~iKaVIFDlDGTLw~~~~~-~~i~~~~~~~~~i~~~~~~~~-~l~pgv~elL~~Lk~~GikiaIvTn~~~------- 82 (538)
|..++|+|+||+||||+..... .+. ...... .++||+.++|+.|+++|++++|+||++.
T Consensus 54 ~~~~~k~v~fD~DGTL~~~~~~~~~~------------~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~ 121 (416)
T 3zvl_A 54 VKPQGKVAAFDLDGTLITTRSGKVFP------------TSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLP 121 (416)
T ss_dssp CCCCSSEEEECSBTTTEECSSCSSSC------------SSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSC
T ss_pred CCCCCeEEEEeCCCCccccCCCccCC------------CCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCC
Confidence 4446899999999999753200 000 011122 3899999999999999999999999751
Q ss_pred H----HHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcC----CCCCcEEEEeCCc---------------
Q psy8912 83 I----LHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATG----IEYKDMVFFDDEE--------------- 134 (538)
Q Consensus 83 p----~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lg----i~P~e~L~IGDs~--------------- 134 (538)
+ ..+...++.+|+. |+.+.. ..+++|++|..+++++| ++|++|+||||+.
T Consensus 122 ~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~ 199 (416)
T 3zvl_A 122 AEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDF 199 (416)
T ss_dssp HHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCS
T ss_pred HHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCC
Confidence 0 2377888999984 776522 23345699999999998 9999999999997
Q ss_pred --ccHHHHhhcCCeEEEE
Q psy8912 135 --RNSHDVSPLGVTCIHS 150 (538)
Q Consensus 135 --~DI~aAk~aG~~tI~V 150 (538)
.|+.+|+++|+.++..
T Consensus 200 s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 200 SCADRLFALNVGLPFATP 217 (416)
T ss_dssp CCHHHHHHHHHTCCEECH
T ss_pred ChhhHHHHHHcCCcccCc
Confidence 7999999999997644
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.6e-15 Score=143.12 Aligned_cols=91 Identities=7% Similarity=-0.087 Sum_probs=79.2
Q ss_pred CCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 52 TLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
....++||+.++|+.|+++ |++++|+||++. ..++..++.+|+ |+.+. +. .+++++|++|++|+||
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~-~~~~~~l~~~gl---f~~i~--~~-------~~~~~~~~~~~~~~~v 136 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLL-KYHHCVGEKYRW---VEQHL--GP-------QFVERIILTRDKTVVL 136 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCS-SCTTTHHHHHHH---HHHHH--CH-------HHHTTEEECSCGGGBC
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCCh-hhHHHHHHHhCc---hhhhc--CH-------HHHHHcCCCcccEEEE
Confidence 3568999999999999999 999999999988 788888999887 77632 11 3789999999999999
Q ss_pred eCCccc----HHHHh-hcCCeEEEECCCCC
Q psy8912 131 DDEERN----SHDVS-PLGVTCIHSWLMMS 155 (538)
Q Consensus 131 GDs~~D----I~aAk-~aG~~tI~V~~G~~ 155 (538)
||+..| +.+|+ ++|+.+|++.++..
T Consensus 137 gDs~~dD~~~i~~A~~~aG~~~i~~~~~~~ 166 (193)
T 2i7d_A 137 GDLLIDDKDTVRGQEETPSWEHILFTCCHN 166 (193)
T ss_dssp CSEEEESSSCCCSSCSSCSSEEEEECCGGG
T ss_pred CCchhhCcHHHhhcccccccceEEEEeccC
Confidence 999999 99999 99999999987543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.50 E-value=7e-14 Score=136.88 Aligned_cols=98 Identities=12% Similarity=0.141 Sum_probs=84.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++++|++. .+...|+++||.+||+.+.... .+.++.|+++++++|++|++|
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~---~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 190 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK---NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC 190 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT---THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccccchhHHHHHHHHHhcccccccccccc---hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence 45689999999999999999999988664 3467899999999999432221 245677999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|||||+.+|+++|++||+.+|+|++.
T Consensus 191 l~VGDs~~Di~aA~~aG~~~i~v~~~ 216 (250)
T 4gib_A 191 IGIEDASAGIDAINSANMFSVGVGNY 216 (250)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEESCT
T ss_pred EEECCCHHHHHHHHHcCCEEEEECCh
Confidence 99999999999999999999999763
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.6e-13 Score=134.93 Aligned_cols=69 Identities=10% Similarity=0.071 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++||..|..+++++|++|++|++|||+. +|+.+|+++|+.+++|.+|.......... ...|++++.+..
T Consensus 195 kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~-~~~~~~~i~~l~ 264 (271)
T 1vjr_A 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA-ETKPDFVFKNLG 264 (271)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHC-SSCCSEEESSHH
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhc-CCCCCEEECCHH
Confidence 4577999999999999999999999995 99999999999999999998765544432 246888887643
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.4e-14 Score=132.39 Aligned_cols=108 Identities=17% Similarity=0.200 Sum_probs=95.0
Q ss_pred hhcCCCCccCCCHHHHHHHHHHCC-ceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCc
Q psy8912 416 DAGGAIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 416 d~~~~~v~l~pGv~e~L~~Lk~~G-iklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee 494 (538)
+.+.....++||+.++|++|+++| ++++++|++.. ..++..++.+|+.+||+.....+.+|+..|.++++++|++|++
T Consensus 98 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~-~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~ 176 (234)
T 3ddh_A 98 SLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDL-LDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSE 176 (234)
T ss_dssp HHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCH-HHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGG
T ss_pred HHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcce
Confidence 334456789999999999999999 99999997764 4778899999999999965556668899999999999999999
Q ss_pred EEEEeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|++|||+. +|+++|+++|+.+++|+.|.++
T Consensus 177 ~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~ 207 (234)
T 3ddh_A 177 LLMVGNSFKSDIQPVLSLGGYGVHIPFEVMW 207 (234)
T ss_dssp EEEEESCCCCCCHHHHHHTCEEEECCCCTTC
T ss_pred EEEECCCcHHHhHHHHHCCCeEEEecCCccc
Confidence 99999996 9999999999999999766544
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-14 Score=136.88 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=88.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc--ccceee----cCCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF--DHKEIF----PGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF--d~~~i~----~~~k~~~~~kal~~lgi~pe 493 (538)
....++||+.++|++|+++|++++++|++.. ..++..++.+|+.+|| +..... ..+++..|..+++++|++|+
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNAR-ELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCch-HHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 4567899999999999999999999998875 4888999999999999 522111 12457789999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|++|||+.+|+++|+++|+.+|+|.++.
T Consensus 146 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~ 174 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRAAGTRTVLVNLPD 174 (205)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEECSSSS
T ss_pred HEEEECCCHHHHHHHHHcCCEEEEEeCCC
Confidence 99999999999999999999999999875
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=139.11 Aligned_cols=70 Identities=11% Similarity=-0.032 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHh-----hCCCCCCEEEeCCc
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEA-----TGIDYKDMIYFDDE 176 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~-----l~~~~~d~Ii~d~~ 176 (538)
+++|.+|..+++++|++|++|++|||+. +|+.+|+++|+.+++|.+|......... .....||+++.+..
T Consensus 215 KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~ 290 (306)
T 2oyc_A 215 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIA 290 (306)
T ss_dssp TTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGG
T ss_pred CCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHH
Confidence 4456899999999999999999999996 9999999999999999999876554432 12346899887654
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3e-14 Score=133.44 Aligned_cols=108 Identities=9% Similarity=0.089 Sum_probs=85.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------------chHHHHHHHhhcCCccccccceee-----c-----CC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------------EMLRAHQLVDLFNWNQHFDHKEIF-----P-----GQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------------~~~~a~~~L~~lgL~~yFd~~~i~-----~-----~~ 476 (538)
.+.++||+.++|++|+++|++++|+|+++ ....++..|+.+|+. |+...+. . .+
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP 117 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKP 117 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTT
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCC
Confidence 47799999999999999999999999872 234778899999997 7743222 1 13
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC-CHHHHHHH
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM-SHSVLHKG 530 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~-t~~~~~~~ 530 (538)
+++.|.++++++|++|++|+||||+..|+++|+++|+.++.|.++- +|++..+.
T Consensus 118 ~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~ 172 (176)
T 2fpr_A 118 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQ 172 (176)
T ss_dssp SCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTBCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcccHHHHHHH
Confidence 5677999999999999999999999999999999999999998874 46555443
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.5e-14 Score=144.76 Aligned_cols=98 Identities=18% Similarity=0.170 Sum_probs=85.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-ee--------------cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EI--------------YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~--------------~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++++||+.. ..++..++.+|+..+|+.. +. .+++||+.|..
T Consensus 174 ~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~ 252 (335)
T 3n28_A 174 RETLPLMPELPELVATLHAFGWKVAIASGGFT-YFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLT 252 (335)
T ss_dssp HTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHH
T ss_pred HHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHH
Confidence 44577999999999999999999999999987 8999999999998887743 11 11356789999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+++++|++|++|++|||+.+|+.+|+++|+.++.
T Consensus 253 ~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 253 LAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 9999999999999999999999999999997654
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-13 Score=137.16 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=86.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc---CCccccccce---eecCCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---NWNQHFDHKE---IFPGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l---gL~~yFd~~~---i~~~~k~~~~~kal~~lgi~pe 493 (538)
..+.++||+.++|++|+++|++++|+|+++.. .++..|+++ ||.+||+... +...+.++.|+++++++|++|+
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~-~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVE-AQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHH-HHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 45789999999999999999999999998754 677788854 5999999421 2222345779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|+||||+.+|+++|+++|+.+|+|.++
T Consensus 206 ~~l~VgDs~~di~aA~~aG~~~i~v~~~ 233 (261)
T 1yns_A 206 NILFLTDVTREASAAEEADVHVAVVVRP 233 (261)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEEeCC
Confidence 9999999999999999999999999874
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-14 Score=126.61 Aligned_cols=101 Identities=15% Similarity=0.068 Sum_probs=87.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~l 496 (538)
..++||+.++|++|+++|++++++|+++.. .++..|+.+|+.+||+..... ..+.++.|..+++++|++|++|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 95 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGG-LGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV 95 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCG-GGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 347899999999999999999999998765 678889999999999943322 22456779999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|||+..|+++|+++|+.++.+.++..
T Consensus 96 ~vgD~~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 96 LVDDSILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp EEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred EEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence 999999999999999999999988643
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=131.42 Aligned_cols=104 Identities=18% Similarity=0.154 Sum_probs=91.1
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++++|++.. ..++..|+.+|+.+||+..... ..++++.|.++++++|++|+
T Consensus 79 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 157 (222)
T 2nyv_A 79 VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLE-ELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPE 157 (222)
T ss_dssp CSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGG
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCch
Confidence 45678999999999999999999999998864 4788899999999999943221 22568889999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+.+|+.+|+++|+.+++|.+|..
T Consensus 158 ~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~ 187 (222)
T 2nyv_A 158 KALIVGDTDADIEAGKRAGTKTALALWGYV 187 (222)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEETTSSC
T ss_pred hEEEECCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 999999999999999999999999998753
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-13 Score=130.61 Aligned_cols=104 Identities=18% Similarity=0.133 Sum_probs=91.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++++|++.. ..++..++.+|+.+||+...... .++++.|.++++++|++|++
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 179 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVE-KAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPER 179 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 4567999999999999999999999998875 47889999999999999432221 25678899999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|++|||+.+|+++|+++|+.+++|.+|.+.
T Consensus 180 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~ 209 (237)
T 4ex6_A 180 CVVIGDGVPDAEMGRAAGMTVIGVSYGVSG 209 (237)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEESSSSSC
T ss_pred eEEEcCCHHHHHHHHHCCCeEEEEecCCCC
Confidence 999999999999999999999999998654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.5e-13 Score=130.86 Aligned_cols=103 Identities=12% Similarity=0.169 Sum_probs=89.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---c--CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---P--GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~--~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++++|++.. ..++..++.+|+..||+..... . .++++.|.++++++|++|++|
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 170 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELGYELGIITDGNP-VKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEA 170 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHTCEEEEEECSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEECCCc-hhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 367899999999999999999999998864 4788899999999999943221 1 245678999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+. +|+++|+++|+.+++|++|...
T Consensus 171 i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~ 200 (241)
T 2hoq_A 171 LMVGDRLYSDIYGAKRVGMKTVWFRYGKHS 200 (241)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECCSCCC
T ss_pred EEECCCchHhHHHHHHCCCEEEEECCCCCC
Confidence 9999998 9999999999999999998653
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-13 Score=130.24 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=90.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++++|++.. ..++..++.+|+.+||+...... .+++..|.++++++|++|++|
T Consensus 84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 84 ENKVYDGIEALLSSLKDYGFHLVVATSKPT-VFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp SCCBCTTHHHHHHHHHHHTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 467999999999999999999999998864 47889999999999999433222 246777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+.+|+++|+++|+.+++|.+|...
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~ 191 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGS 191 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSC
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCC
Confidence 99999999999999999999999998644
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-13 Score=130.72 Aligned_cols=105 Identities=10% Similarity=0.108 Sum_probs=91.5
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
+.....++||+.++|+.|+ +|++++++|++... .+...|+.+|+.+||+.......++++.|.++++++|++|++|++
T Consensus 107 ~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~-~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~ 184 (251)
T 2pke_A 107 LQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLF-HQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVM 184 (251)
T ss_dssp HTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHH-HHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEE
T ss_pred HhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHH-HHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEE
Confidence 3456789999999999999 99999999988754 778899999999999965545556788899999999999999999
Q ss_pred Eeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 498 FDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 498 ~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|||+. +|+++|+++|+.+++|++|.++
T Consensus 185 iGD~~~~Di~~a~~aG~~~~~v~~~~~~ 212 (251)
T 2pke_A 185 IGNSLRSDVEPVLAIGGWGIYTPYAVTW 212 (251)
T ss_dssp EESCCCCCCHHHHHTTCEEEECCCC---
T ss_pred ECCCchhhHHHHHHCCCEEEEECCCCcc
Confidence 99999 9999999999999999998654
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=145.70 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=89.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc--cceee----------------cCCchHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD--HKEIF----------------PGQKTTHFA 482 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd--~~~i~----------------~~~k~~~~~ 482 (538)
.+.++||+.++|+.|+++|++++|+|+++.. .++..|+++|+.+||+ .+... ..+.++.|.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~-~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYT-ETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHH-HHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 4678999999999999999999999999754 7888999999999998 33221 234577799
Q ss_pred HHHHHhC--------------CCCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 483 NLKKATG--------------IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 483 kal~~lg--------------i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
.+++++| ++|++|+||||+..|+++|++||+.+|+|++|..
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~ 346 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCcc
Confidence 9999999 9999999999999999999999999999999874
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.3e-14 Score=129.19 Aligned_cols=110 Identities=11% Similarity=-0.010 Sum_probs=84.4
Q ss_pred hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecC----CCC--HHHHHHHHHHcCCC
Q psy8912 50 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP----GQK--TTHFESLKKATGIE 123 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~----~~K--p~~f~~ale~lgi~ 123 (538)
......++||+.++|+.|+++|++++++||++. ..++.. +.+|+..+|+.+.... +++ |.....+++++ +
T Consensus 74 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~ 149 (201)
T 4ap9_A 74 TREKVNVSPEARELVETLREKGFKVVLISGSFE-EVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--R 149 (201)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEET-TTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--T
T ss_pred HHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcH-HHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--C
Confidence 345568899999999999999999999999877 777777 8889877755432111 122 23355666766 8
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|++|++|||+.+|+.+|+++|+. +++.++.. .+|+++.+.
T Consensus 150 ~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~-----------~ad~v~~~~ 189 (201)
T 4ap9_A 150 DGFILAMGDGYADAKMFERADMG-IAVGREIP-----------GADLLVKDL 189 (201)
T ss_dssp TSCEEEEECTTCCHHHHHHCSEE-EEESSCCT-----------TCSEEESSH
T ss_pred cCcEEEEeCCHHHHHHHHhCCce-EEECCCCc-----------cccEEEccH
Confidence 99999999999999999999996 66765442 678888653
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.7e-15 Score=145.81 Aligned_cols=116 Identities=9% Similarity=0.011 Sum_probs=88.4
Q ss_pred CHHHHHHHhhhCCceEEEEcCCCcHHHH--H--HHHHHcCCCCCCcce-----eecCCCCHHHHHHHHHHc----CCCCC
Q psy8912 59 GVPEILRYLKENKCLVAAASRTSEILHA--K--QILNLINLNQYFSNK-----EIYPGQKTTHFESLKKAT----GIEYK 125 (538)
Q Consensus 59 gv~elL~~Lk~~GikiaIvTn~~~p~~~--~--~~L~~lgL~~~Fd~i-----e~~~~~Kp~~f~~ale~l----gi~P~ 125 (538)
...++++.|+++|++ +|+||++. ... . ..+...++..+|+.+ ...++++|++|..+++++ |++|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~-~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDN-TYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCS-EEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCc-cccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 566777789999999 99999976 433 2 112445666777755 224556779999999999 99999
Q ss_pred cEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHh---hCCCCCCEEEeCCc
Q psy8912 126 DMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEA---TGIDYKDMIYFDDE 176 (538)
Q Consensus 126 e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~---l~~~~~d~Ii~d~~ 176 (538)
+|+||||+. +|+.+|+++|+.+++|.+|......... .....||+++.+..
T Consensus 227 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~ 281 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAV 281 (284)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSC
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchh
Confidence 999999995 9999999999999999999876554431 11246899887754
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.7e-13 Score=128.57 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=89.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+++|++++++|++.. ..++..|+.+|+..||+..... ..++++.|..+++++|++|++|
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 181 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGND-EMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEV 181 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 477999999999999999999999998874 4788899999999999943221 1246777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|||+.+|+++|+++|+.+++|.+|..
T Consensus 182 ~~iGD~~~Di~~a~~aG~~~~~v~~~~~ 209 (240)
T 2no4_A 182 CFVSSNAWDLGGAGKFGFNTVRINRQGN 209 (240)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTTCC
T ss_pred EEEeCCHHHHHHHHHCCCEEEEECCCCC
Confidence 9999999999999999999999998754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=129.93 Aligned_cols=104 Identities=16% Similarity=0.251 Sum_probs=90.5
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++++|++.. ..++.+|+.+|+.+||+...... ..+++.|.++++++|++|+
T Consensus 110 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 188 (243)
T 2hsz_A 110 CNISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 188 (243)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCccCCCHHHHHHHHHHCCCEEEEEECCcH-HHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChh
Confidence 44578999999999999999999999998875 47889999999999999432211 1456679999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+.+|+.+|+++|+.+++|.+|.+
T Consensus 189 ~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~ 218 (243)
T 2hsz_A 189 QILFVGDSQNDIFAAHSAGCAVVGLTYGYN 218 (243)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred hEEEEcCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 999999999999999999999999999864
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.1e-13 Score=126.37 Aligned_cols=103 Identities=12% Similarity=-0.002 Sum_probs=90.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++++|++.. ..++..|+.+|+..||+..... ..+++..|.++++++|++|++
T Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 166 (233)
T 3s6j_A 88 HQIIALPGAVELLETLDKENLKWCIATSGGI-DTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDE 166 (233)
T ss_dssp GGCEECTTHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCch-hhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHH
Confidence 3478999999999999999999999998864 4788999999999999943221 124678899999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|||+.+|+++|+++|+.+++|.+|.+
T Consensus 167 ~i~iGD~~~Di~~a~~aG~~~i~v~~g~~ 195 (233)
T 3s6j_A 167 CLVIGDAIWDMLAARRCKATGVGLLSGGY 195 (233)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEGGGSC
T ss_pred EEEEeCCHHhHHHHHHCCCEEEEEeCCCC
Confidence 99999999999999999999999999743
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.42 E-value=6e-13 Score=123.45 Aligned_cols=99 Identities=13% Similarity=0.130 Sum_probs=87.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~l 496 (538)
..++||+.++|++|+++|++++++|++.. ..++..++.+|+.+||+...... .+++..|.++++++|++|++|+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVK-ADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL 166 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcH-HHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence 46899999999999999999999998864 48889999999999999432221 2457789999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|||+.+|+.+|+++|+.++++.++
T Consensus 167 ~iGD~~~Di~~a~~aG~~~~~~~~~ 191 (214)
T 3e58_A 167 IIEDSEKGIAAGVAADVEVWAIRDN 191 (214)
T ss_dssp EEECSHHHHHHHHHTTCEEEEECCS
T ss_pred EEeccHhhHHHHHHCCCEEEEECCC
Confidence 9999999999999999999999876
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-12 Score=125.55 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=56.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 106 PGQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 106 ~~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+++||..|..+++++|++|++|++|||+. +|+.+|+.+|+.+++|.+|........ .....||+++.+..+
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~-~~~~~~~~~~~~~~e 260 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEH-HPEVKADGYVDNLAE 260 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGG-CSSCCCSEEESSHHH
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhc-ccCCCCCEEeCCHHH
Confidence 45678999999999999999999999998 999999999999999999854322211 113568888876443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-13 Score=128.61 Aligned_cols=97 Identities=15% Similarity=0.217 Sum_probs=84.4
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee---------------ecCCchHHHHHH
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---------------FPGQKTTHFANL 484 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i---------------~~~~k~~~~~ka 484 (538)
..+.++||+.++|++|+++|++++++|++.. ..++..++.+|+..+|+.... ...+|+..|..+
T Consensus 72 ~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~ 150 (217)
T 3m1y_A 72 ESLPLFEGALELVSALKEKNYKVVCFSGGFD-LATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL 150 (217)
T ss_dssp TTCCBCBTHHHHHHHHHTTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred hcCcCCCCHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence 3478999999999999999999999998875 488889999999999984321 123567779999
Q ss_pred HHHhCCCCCcEEEEecccccHHhHcccCCEEEE
Q psy8912 485 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 485 l~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
++++|++|++|++|||+.+|+.+|+++|+.++.
T Consensus 151 ~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 151 QRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp HHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred HHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 999999999999999999999999999998865
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.41 E-value=5.5e-13 Score=127.01 Aligned_cols=101 Identities=15% Similarity=0.209 Sum_probs=88.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++++|++.. ..++..|+.+|+..||+..... ..+++..|.++++++|++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 467999999999999999999999998874 4788899999999999943221 1245667999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++|||+.+|+++|+++|+.++.|.++.
T Consensus 172 ~~iGD~~~Di~~a~~aG~~~~~~~~~~ 198 (232)
T 1zrn_A 172 LFVASNAWDATGARYFGFPTCWINRTG 198 (232)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTC
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence 999999999999999999999998864
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.41 E-value=8.4e-13 Score=124.86 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=92.1
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHh
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKAT 488 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~l 488 (538)
+.+.+ ....++||+.++|+.|+++|++++++|++.. ..++..|+.+|+.+||+...... .+++..|.++++++
T Consensus 88 ~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 165 (230)
T 3um9_A 88 LCSEY-LSLTPFADVPQALQQLRAAGLKTAILSNGSR-HSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTL 165 (230)
T ss_dssp HHHHT-TSCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHH
T ss_pred HHHHH-hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHh
Confidence 34444 4678999999999999999999999998875 47888999999999999432221 24577799999999
Q ss_pred CCCCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 489 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 489 gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|++|++|||+.+|+++|+++|+.++.|.+|.+
T Consensus 166 ~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~ 200 (230)
T 3um9_A 166 HLGESEILFVSCNSWDATGAKYFGYPVCWINRSNG 200 (230)
T ss_dssp TCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSC
T ss_pred CCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCC
Confidence 99999999999999999999999999999988643
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.6e-13 Score=131.53 Aligned_cols=70 Identities=10% Similarity=0.041 Sum_probs=56.2
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 105 YPGQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 105 ~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
.++++|.+|..++++ ++|++|+||||+. +|+.+|+++|+.+++|.+|.......... ...||+++.+..+
T Consensus 185 ~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~-~~~p~~~~~~l~e 255 (263)
T 1zjj_A 185 IGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKS-EYKPDLVLPSVYE 255 (263)
T ss_dssp CSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTC-SSCCSEEESSGGG
T ss_pred ecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhc-CCCCCEEECCHHH
Confidence 345667899999999 9999999999996 99999999999999999988765543321 2368998877443
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-13 Score=130.88 Aligned_cols=101 Identities=11% Similarity=0.051 Sum_probs=87.3
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
+.....++||+.++|++|+++| +++|+|+++.. .++..|+++|+.+||+........|+..+..+++ |++|++|+|
T Consensus 91 ~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~-~~~~~l~~~gl~~~f~~~~~~~~~K~~~~~~~~~--~~~~~~~~~ 166 (231)
T 2p11_A 91 YPFASRVYPGALNALRHLGARG-PTVILSDGDVV-FQPRKIARSGLWDEVEGRVLIYIHKELMLDQVME--CYPARHYVM 166 (231)
T ss_dssp CCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSS-HHHHHHHHTTHHHHTTTCEEEESSGGGCHHHHHH--HSCCSEEEE
T ss_pred HHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHH-HHHHHHHHcCcHHhcCeeEEecCChHHHHHHHHh--cCCCceEEE
Confidence 3345789999999999999999 99999999865 7889999999999999654445567666666655 899999999
Q ss_pred Eecccc---cHHhHcccCCEEEEECCCC
Q psy8912 498 FDDEER---NSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 498 ~eDs~~---~I~aAk~aGi~~i~V~dg~ 522 (538)
|||+.+ |+++|+++|+.+++|.+|.
T Consensus 167 vgDs~~d~~di~~A~~aG~~~i~v~~g~ 194 (231)
T 2p11_A 167 VDDKLRILAAMKKAWGARLTTVFPRQGH 194 (231)
T ss_dssp ECSCHHHHHHHHHHHGGGEEEEEECCSS
T ss_pred EcCccchhhhhHHHHHcCCeEEEeCCCC
Confidence 999999 9999999999999999984
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-13 Score=135.37 Aligned_cols=125 Identities=16% Similarity=0.080 Sum_probs=94.9
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHH---HHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AKQILNL 92 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~---~~~~L~~ 92 (538)
++.+++|+|||+....-. .|+. + .......+|||+.++|+.|+++|++++++||++. .. +...|+.
T Consensus 159 ~~~i~iD~dgtl~~~~~~---~~~~--~-----~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~-~~~~~~~~~l~~ 227 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGR---GPYD--L-----EKCDTDVINPMVVELSKMYALMGYQIVVVSGRES-GTKEDPTKYYRM 227 (301)
T ss_dssp CEEEEEETBTTTBCCSSC---CTTC--G-----GGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCC-CCSSSTTHHHHH
T ss_pred cceEEEeCCCCcccccCC---Cchh--h-----hhccccCCChHHHHHHHHHHHCCCeEEEEeCCCc-ccchhHHHHHHh
Confidence 478999999998431100 0000 0 0123567999999999999999999999999975 32 3566777
Q ss_pred --------cCCCCCCcceee----cCCCCHHHHHHHHHHcCCCCCc-EEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 93 --------INLNQYFSNKEI----YPGQKTTHFESLKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 93 --------lgL~~~Fd~ie~----~~~~Kp~~f~~ale~lgi~P~e-~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
+|+ +|+.+.. ..+++|+++..++++++.++.+ |+||||+..|+++|+++|+.+++|.||
T Consensus 228 ~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 228 TRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred cccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 888 4776522 2234568899999999888755 799999999999999999999999998
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.3e-13 Score=134.21 Aligned_cols=95 Identities=17% Similarity=0.179 Sum_probs=80.0
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc--C---------Cc----ccccccee-ecCCchHHHHH
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF--N---------WN----QHFDHKEI-FPGQKTTHFAN 483 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l--g---------L~----~yFd~~~i-~~~~k~~~~~k 483 (538)
....++||+.++|++ |++++|+||+++. .++..|+++ | |. .||+. .+ +..+.++.|++
T Consensus 122 ~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~-~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g~KP~p~~~~~ 195 (253)
T 2g80_A 122 IKAPVYADAIDFIKR----KKRVFIYSSGSVK-AQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSGKKTETQSYAN 195 (253)
T ss_dssp CCBCCCHHHHHHHHH----CSCEEEECSSCHH-HHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHCCTTCHHHHHH
T ss_pred ccCCCCCCHHHHHHc----CCEEEEEeCCCHH-HHHHHHHhhcccccccccccchHhhcceEEee-eccCCCCCHHHHHH
Confidence 357899999999988 9999999999865 778888877 5 44 44553 22 33455777999
Q ss_pred HHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 484 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 484 al~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+++++|++|++|+||||+.+|+++|++||+.+|+|.+
T Consensus 196 a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 196 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred HHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999999999999999987
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.9e-13 Score=128.14 Aligned_cols=103 Identities=11% Similarity=0.111 Sum_probs=88.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc--ccceee-----cCCchHHHHHHHHHhCCCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF--DHKEIF-----PGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF--d~~~i~-----~~~k~~~~~kal~~lgi~pe 493 (538)
...++||+.++|++|+++|++++++|++... .+...|+. |+.+|| +..... ..++++.|.++++++|++|+
T Consensus 107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~-~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQL-SLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKAD 184 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECCCCCH-HHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHH-HHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHH
Confidence 4678999999999999999999999998765 67778888 999999 732221 12467789999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+|++|||+.+|+++|+++|+.+++|.+|....
T Consensus 185 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~ 216 (243)
T 3qxg_A 185 EAVVIENAPLGVEAGHKAGIFTIAVNTGPLDG 216 (243)
T ss_dssp GEEEEECSHHHHHHHHHTTCEEEEECCSSSCH
T ss_pred HeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCH
Confidence 99999999999999999999999999986543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.7e-13 Score=127.42 Aligned_cols=102 Identities=11% Similarity=0.109 Sum_probs=86.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc--ccceee-----cCCchHHHHHHHHHhCCCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF--DHKEIF-----PGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF--d~~~i~-----~~~k~~~~~kal~~lgi~pe 493 (538)
...++||+.++|++|+++|++++++|++... .+...|+. |+.+|| +..... ..+++..|.++++++|++|+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~-~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQT-SLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN 183 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchH-HHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence 4678999999999999999999999988754 67778998 999999 732221 12567779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|++|||+.+|+++|+++|+.+++|.+|...
T Consensus 184 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~ 214 (247)
T 3dv9_A 184 EALVIENAPLGVQAGVAAGIFTIAVNTGPLH 214 (247)
T ss_dssp GEEEEECSHHHHHHHHHTTSEEEEECCSSSC
T ss_pred heEEEeCCHHHHHHHHHCCCeEEEEcCCCCC
Confidence 9999999999999999999999999997543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.4e-13 Score=126.16 Aligned_cols=101 Identities=13% Similarity=0.133 Sum_probs=88.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++|++++++|++.. ..++..|+.+|+.+||+...... .+++..|.++++++|++|++|
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNP-QMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCH-HHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 578999999999999999999999998875 47888999999999999432221 245667999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++|||+.+|+.+|+++|+.++.|.+|.
T Consensus 176 ~~vGD~~~Di~~a~~~G~~~~~v~~~~ 202 (233)
T 3umb_A 176 LFVSSNGWDACGATWHGFTTFWINRLG 202 (233)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence 999999999999999999999998864
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.9e-13 Score=127.22 Aligned_cols=105 Identities=15% Similarity=0.204 Sum_probs=91.5
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCC-CC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIE-YK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~-pe 493 (538)
....++||+.++|++|+++|++++++|++.. ..++..|+.+|+.+||+...... .+++..|..+++++|++ |+
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~ 185 (240)
T 3sd7_A 107 FENKIYENMKEILEMLYKNGKILLVATSKPT-VFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKD 185 (240)
T ss_dssp GCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGG
T ss_pred cccccCccHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCC
Confidence 3577999999999999999999999998764 48889999999999999433222 14677799999999999 99
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+|++|||+.+|+++|+++|+.+++|.+|....
T Consensus 186 ~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~ 217 (240)
T 3sd7_A 186 KVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSF 217 (240)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEESSSSCCH
T ss_pred cEEEECCCHHHHHHHHHCCCCEEEEeCCCCCH
Confidence 99999999999999999999999999886543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-13 Score=140.10 Aligned_cols=100 Identities=13% Similarity=0.139 Sum_probs=85.3
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---------------cCCchHHH
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------PGQKTTHF 481 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------------~~~k~~~~ 481 (538)
.....+.++||+.++|++|+++|++++|+|++.. ..++.+++++|+..+|+..... ..+|++.|
T Consensus 173 ~~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~-~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~ 251 (317)
T 4eze_A 173 AVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLD-IFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTL 251 (317)
T ss_dssp HHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHH
T ss_pred HHHhCCEECcCHHHHHHHHHhCCCEEEEEeCccH-HHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHH
Confidence 3334678999999999999999999999999875 4889999999999999843210 12456779
Q ss_pred HHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEE
Q psy8912 482 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 482 ~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
.++++++|++|++|++|||+.+|+.+|+++|+.++.
T Consensus 252 ~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 252 VDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 999999999999999999999999999999986654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.39 E-value=6.5e-13 Score=131.20 Aligned_cols=99 Identities=15% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|++ |++++|+|+++.. .++..|+.+|+..||+...... .++++.|.++++++|++|++|
T Consensus 119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~-~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 196 (260)
T 2gfh_A 119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQ-TQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 196 (260)
T ss_dssp TCCCCHHHHHHHHHHHT-TSEEEEEECSCHH-HHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCcCHHHHHHHHHc-CCcEEEEECcChH-HHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 47899999999999998 5999999998754 7788999999999999533221 134677999999999999999
Q ss_pred EEEecc-cccHHhHcccCC-EEEEECCC
Q psy8912 496 VFFDDE-ERNSHDVSPLGV-TCIHVKDG 521 (538)
Q Consensus 496 l~~eDs-~~~I~aAk~aGi-~~i~V~dg 521 (538)
+||||+ .+|+++|+++|+ .+++|.++
T Consensus 197 ~~vGDs~~~Di~~A~~aG~~~~i~v~~~ 224 (260)
T 2gfh_A 197 VMVGDTLETDIQGGLNAGLKATVWINKS 224 (260)
T ss_dssp EEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred EEECCCchhhHHHHHHCCCceEEEEcCC
Confidence 999995 999999999999 89999875
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=122.78 Aligned_cols=130 Identities=17% Similarity=0.168 Sum_probs=92.7
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC---CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY---RGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~---pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
.+|+|+||+||||++.... + .........| ++ ..|+.|+++|++++|+||. . .++..++
T Consensus 8 ~ikliv~D~DGtL~d~~~~--~-----------~~~g~~~~~f~~~D~--~~L~~Lk~~Gi~~~I~Tg~-~--~~~~~l~ 69 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIY--V-----------SGDQKEIISYDVKDA--IGISLLKKSGIEVRLISER-A--CSKQTLS 69 (168)
T ss_dssp CCCEEEEECCCCCSCSCCB--C-----------CSSCCCEEEEEHHHH--HHHHHHHHTTCEEEEECSS-C--CCHHHHH
T ss_pred cCcEEEEeCccceECCcEE--E-----------cCCCCEEEEEecCcH--HHHHHHHHCCCEEEEEeCc-H--HHHHHHH
Confidence 4899999999999763210 0 0000001111 11 3699999999999999999 3 4777888
Q ss_pred --HcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCC
Q psy8912 92 --LINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKD 169 (538)
Q Consensus 92 --~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d 169 (538)
.+++. +|.. ..+||+.+..+++++|++|++|+||||+.+|+.+++.+|+.+ .+.++. .. .+ ..+|
T Consensus 70 ~l~lgi~-~~~g----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~-a~~na~--~~-~k----~~Ad 136 (168)
T 3ewi_A 70 ALKLDCK-TEVS----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSA-VPADAC--SG-AQ----KAVG 136 (168)
T ss_dssp TTCCCCC-EECS----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEE-ECTTCC--HH-HH----TTCS
T ss_pred HhCCCcE-EEEC----CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEE-EeCChh--HH-HH----HhCC
Confidence 66765 5433 457899999999999999999999999999999999999974 454432 22 22 2467
Q ss_pred EEEeCC
Q psy8912 170 MIYFDD 175 (538)
Q Consensus 170 ~Ii~d~ 175 (538)
+|....
T Consensus 137 ~v~~~~ 142 (168)
T 3ewi_A 137 YICKCS 142 (168)
T ss_dssp EECSSC
T ss_pred EEeCCC
Confidence 877653
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-13 Score=137.49 Aligned_cols=209 Identities=13% Similarity=0.119 Sum_probs=135.9
Q ss_pred cccccccccccc---cccchHHHHHHhhhcCcceeeecc--ccccchhhhHHhhhCCC-cccccccccCcchhhhhhhhc
Q psy8912 302 DRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASR--TVHIRNAYSLLHLLGLS-DFFDYKEIFPAEKKIKHFANL 375 (538)
Q Consensus 302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 375 (538)
--+-|-.|||.+ ++|.+.+.++.|+++|++++++|. +-+.......+..+|+. ..+ ++++.+..-+..+.
T Consensus 16 ~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~--~~ii~~~~~~~~~l-- 91 (284)
T 2hx1_A 16 CIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITA--DKIISSGMITKEYI-- 91 (284)
T ss_dssp EEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCG--GGEEEHHHHHHHHH--
T ss_pred EEEEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCH--hhEEcHHHHHHHHH--
Confidence 346788899865 578999999999999999999994 12334566778899987 444 67777643333221
Q ss_pred ccCcCCCccceEEe-ecC---------CCCcCCCC----CCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCce
Q psy8912 376 KKDSKIKYKDMVFF-DDE---------ERNARSIS----KLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCL 441 (538)
Q Consensus 376 ~~~~~~~~~~l~~~-Dld---------h~~~s~~~----p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gik 441 (538)
++ ++|. -++ -+- ...++..+ .... ......+...+...+...+...++++.|+++|++
T Consensus 92 ~~----~~~~-~v~~~lg~~~l~~~l~~~G~~~~~~~~~~~~~---~~~~~avv~~~~~~~~~~~~~~~l~~~L~~~g~~ 163 (284)
T 2hx1_A 92 DL----KVDG-GIVAYLGTANSANYLVSDGIKMLPVSAIDDSN---IGEVNALVLLDDEGFNWFHDLNKTVNLLRKRTIP 163 (284)
T ss_dssp HH----HCCS-EEEEEESCHHHHHTTCBTTEEEEEGGGCCTTT---GGGEEEEEECCSSSSCHHHHHHHHHHHHHHCCCC
T ss_pred Hh----hcCC-cEEEEecCHHHHHHHHHCCCeeccCCCCCccc---CCCCCEEEEeCCCCcCccccHHHHHHHHhcCCCe
Confidence 11 1233 222 111 11111000 0000 0011121222222233334677778899999999
Q ss_pred EEEEeCCCchHHH--H--HHHhhcCCccccccce----e-ecCCchHHHHHHHHHh----CCCCCcEEEEeccc-ccHHh
Q psy8912 442 VAAASRTTEMLRA--H--QLVDLFNWNQHFDHKE----I-FPGQKTTHFANLKKAT----GIEYKDMVFFDDEE-RNSHD 507 (538)
Q Consensus 442 laIASss~~~~~a--~--~~L~~lgL~~yFd~~~----i-~~~~k~~~~~kal~~l----gi~pee~l~~eDs~-~~I~a 507 (538)
+|+|+++.. .. . .+++..++.+||+... . ...++++.|..+++++ |++|++|++|||+. +||.+
T Consensus 164 -~i~tn~~~~-~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~ 241 (284)
T 2hx1_A 164 -AIVANTDNT-YPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILG 241 (284)
T ss_dssp -EEEECCCSE-EECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHH
T ss_pred -EEEECCCcc-ccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHH
Confidence 999988754 33 2 1246678889998321 1 2235677899999999 99999999999995 99999
Q ss_pred HcccCCEEEEECCCCCH
Q psy8912 508 VSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 508 Ak~aGi~~i~V~dg~t~ 524 (538)
|+++|+.++.|.+|...
T Consensus 242 A~~aG~~~i~v~~g~~~ 258 (284)
T 2hx1_A 242 GNKFGLDTALVLTGNTR 258 (284)
T ss_dssp HHHHTCEEEEESSSSSC
T ss_pred HHHcCCeEEEECCCCCC
Confidence 99999999999998764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.39 E-value=7.9e-13 Score=125.36 Aligned_cols=105 Identities=16% Similarity=0.200 Sum_probs=88.4
Q ss_pred CCCccCCCHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHhhcCCccccccceeecC----Cc--hHHHHHHHHHhC--C
Q psy8912 420 AIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG----QK--TTHFANLKKATG--I 490 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~-GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~----~k--~~~~~kal~~lg--i 490 (538)
....++||+.++|++|+++ |++++|+|++.. ..++..|+.+|+.+||+....... .| +..|.++++++| +
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcH-HHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 3467899999999999999 999999998875 478889999999999994222111 22 334899999999 9
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+|++|++|||+.+|+++|+++|+.+++|.+|....
T Consensus 169 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~ 203 (234)
T 2hcf_A 169 SPSQIVIIGDTEHDIRCARELDARSIAVATGNFTM 203 (234)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCH
T ss_pred CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCH
Confidence 99999999999999999999999999999986543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.2e-13 Score=125.16 Aligned_cols=103 Identities=11% Similarity=0.051 Sum_probs=88.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++| +++++|+++. ..++..|+.+|+.+||+..... ..++++.|.++++++|++|++|
T Consensus 84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 161 (200)
T 3cnh_A 84 QSQPRPEVLALARDLGQRY-RMYSLNNEGR-DLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEA 161 (200)
T ss_dssp TCCBCHHHHHHHHHHTTTS-EEEEEECCCH-HHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCccCccHHHHHHHHHHcC-CEEEEeCCcH-HHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 3559999999999999999 9999999875 4788899999999999943321 1245677999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
++|||+.+|+++|+++|+.+++|.++....
T Consensus 162 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~ 191 (200)
T 3cnh_A 162 VMVDDRLQNVQAARAVGMHAVQCVDAAQLR 191 (200)
T ss_dssp EEEESCHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred EEeCCCHHHHHHHHHCCCEEEEECCchhhH
Confidence 999999999999999999999999875433
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.38 E-value=9.1e-13 Score=132.58 Aligned_cols=124 Identities=12% Similarity=0.029 Sum_probs=92.4
Q ss_pred cceEEeecCC--CCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchH--HHHHHHh
Q psy8912 384 KDMVFFDDEE--RNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEML--RAHQLVD 459 (538)
Q Consensus 384 ~~l~~~Dldh--~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a~~~L~ 459 (538)
+..+++|.|. .+...--|+. .+ .-.+..+|||+.++|++|+++|++++++|+++... .+...|+
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~-----------~~-~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~ 226 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYD-----------LE-KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYR 226 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTC-----------GG-GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHH
T ss_pred cceEEEeCCCCcccccCCCchh-----------hh-hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHH
Confidence 5688899992 2222222332 11 12246799999999999999999999999987431 2356788
Q ss_pred h--------cCCccccccceeecC----CchHHHHHHHHHhCCCCCc-EEEEecccccHHhHcccCCEEEEECCC
Q psy8912 460 L--------FNWNQHFDHKEIFPG----QKTTHFANLKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 460 ~--------lgL~~yFd~~~i~~~----~k~~~~~kal~~lgi~pee-~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+ +|+ +|+.....+. ++++.++.++++++.++.+ |+||||+.+|+++|++||+.|++|.||
T Consensus 227 ~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 227 MTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred hcccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 8 899 5774332221 3456689999999888755 799999999999999999999999998
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.4e-13 Score=126.38 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=81.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~l 496 (538)
..++||+.++|++|+++|++++++|++.. +...|+.+|+.+||+...... . ++++.|.++++++|++|++|+
T Consensus 91 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i 167 (233)
T 3nas_A 91 EDLLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA 167 (233)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEE
T ss_pred CCcCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 44899999999999999999999998743 678899999999999422211 1 345679999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|||+.+|+++|+++|+.++++.+.
T Consensus 168 ~vGDs~~Di~~a~~aG~~~~~~~~~ 192 (233)
T 3nas_A 168 AIEDAEAGISAIKSAGMFAVGVGQG 192 (233)
T ss_dssp EEECSHHHHHHHHHTTCEEEECC--
T ss_pred EEeCCHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999999999999663
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-12 Score=121.45 Aligned_cols=104 Identities=11% Similarity=0.022 Sum_probs=89.5
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p 492 (538)
......++||+.++|++|+ +|++++++|++.. ..++..|+.+|+.+||+...... .+++..|.++++++|++|
T Consensus 102 ~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 179 (240)
T 3qnm_A 102 IPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFR-ELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSEL 179 (240)
T ss_dssp GGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCG
T ss_pred hhhcCCcCccHHHHHHHHH-cCCeEEEEeCCch-HHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCc
Confidence 3345789999999999999 9999999998865 47788999999999999432221 245777999999999999
Q ss_pred CcEEEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+. +|+++|+++|+.++.+..+.+
T Consensus 180 ~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~ 211 (240)
T 3qnm_A 180 RESLMIGDSWEADITGAHGVGMHQAFYNVTER 211 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred ccEEEECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence 9999999995 999999999999999998764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-12 Score=127.58 Aligned_cols=103 Identities=6% Similarity=-0.127 Sum_probs=89.7
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc-cccceee-----cCCchHHHHHHHHHhCCCC-
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-FDHKEIF-----PGQKTTHFANLKKATGIEY- 492 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y-Fd~~~i~-----~~~k~~~~~kal~~lgi~p- 492 (538)
....++||+.++|++|+++|++++++|++.. ..++..++.+|+.+| |+..... ..+++..|..+++++|++|
T Consensus 108 ~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 186 (277)
T 3iru_A 108 QRSQLIPGWKEVFDKLIAQGIKVGGNTGYGP-GMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHV 186 (277)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCG
T ss_pred ccCccCcCHHHHHHHHHHcCCeEEEEeCCch-HHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCC
Confidence 3468999999999999999999999998875 478889999999998 8832221 1256778999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.+++|.+|.+
T Consensus 187 ~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 187 NGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred ccEEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 9999999999999999999999999999964
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.37 E-value=8.6e-13 Score=126.75 Aligned_cols=103 Identities=8% Similarity=0.016 Sum_probs=84.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch--------------HHHHHHHhhcCCc--cccccc-----------ee-
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM--------------LRAHQLVDLFNWN--QHFDHK-----------EI- 472 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--------------~~a~~~L~~lgL~--~yFd~~-----------~i- 472 (538)
...++||+.++|++|+++|++++++|++... ..++..|+.+|+. .+|.+. ..
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~ 133 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDH 133 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCC
Confidence 4678999999999999999999999988641 3678889999974 222211 01
Q ss_pred -ecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE-EEECCCCC
Q psy8912 473 -FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC-IHVKDGMS 523 (538)
Q Consensus 473 -~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~-i~V~dg~t 523 (538)
...+++..|.++++++|++|++|+||||+.+|+++|+++|+.+ +.|.+|.+
T Consensus 134 ~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~ 186 (218)
T 2o2x_A 134 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA 186 (218)
T ss_dssp TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE
T ss_pred ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCC
Confidence 1124577899999999999999999999999999999999999 99999864
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=121.63 Aligned_cols=98 Identities=9% Similarity=0.164 Sum_probs=86.2
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCC---chHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTT---EMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~---~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
.++||+.++|++|+++|++++++|++. .. .++..++.+|+.+||+..... ..++++.|.++++++|++|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGS-YTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHH-HHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchh-HHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 369999999999999999999999876 54 678899999999999943221 125677799999999999999
Q ss_pred EEEEeccc-ccHHhHcccCCEEEEECCC
Q psy8912 495 MVFFDDEE-RNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 495 ~l~~eDs~-~~I~aAk~aGi~~i~V~dg 521 (538)
|++|||+. +|+++|+++|+.++.+.+|
T Consensus 178 ~~~iGD~~~nDi~~a~~aG~~~~~~~~~ 205 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARKVGMWAVWINQE 205 (235)
T ss_dssp EEEEESCTTTTHHHHHHTTSEEEEECTT
T ss_pred eEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 99999999 9999999999999999987
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3.3e-12 Score=125.12 Aligned_cols=102 Identities=13% Similarity=0.205 Sum_probs=80.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.++||+.++|+.|+++|++++++||.+. ..++..++.+|+..+|+. ..+..|....+...+.+ +|++|||+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~~--~~~~~k~~~~k~~~~~~-----~~~~vGD~~ 215 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNR-FVAKWVAEELGLDDYFAE--VLPHEKAEKVKEVQQKY-----VTAMVGDGV 215 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECS--CCGGGHHHHHHHHHTTS-----CEEEEECTT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCChhHhHh--cCHHHHHHHHHHHHhcC-----CEEEEeCCc
Confidence 6889999999999999999999999988 899999999999999988 44555655555555543 899999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEE
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIY 172 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii 172 (538)
+|+.+++++|+ +|.+|..... ....++.++
T Consensus 216 nDi~~~~~Ag~---~va~~~~~~~-----~~~~a~~~~ 245 (280)
T 3skx_A 216 NDAPALAQADV---GIAIGAGTDV-----AVETADIVL 245 (280)
T ss_dssp TTHHHHHHSSE---EEECSCCSSS-----CCCSSSEEC
T ss_pred hhHHHHHhCCc---eEEecCCcHH-----HHhhCCEEE
Confidence 99999999996 3444443322 123466666
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=126.88 Aligned_cols=204 Identities=14% Similarity=0.151 Sum_probs=130.2
Q ss_pred cccccccccccc---cccchHHHHHHhhhcCcceeeecccc--ccchhhhHHhhhCCCcccccccccCcchhhhhhhhcc
Q psy8912 302 DRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTV--HIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLK 376 (538)
Q Consensus 302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (538)
--+-|-+|||.+ .+|.+.+.++.|+++|++..++|..+ +.+.....+..+|+.. ...+++.+..-..++..
T Consensus 9 ~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~~-- 84 (259)
T 2ho4_A 9 AVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI--SEDEIFTSLTAARNLIE-- 84 (259)
T ss_dssp EEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC--CGGGEEEHHHHHHHHHH--
T ss_pred EEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc--cHHHeecHHHHHHHHHH--
Confidence 357899999985 56778888899999999999998432 2334555666777753 23455543211111111
Q ss_pred cCcCCCccceEEeecCCCCcCC-CCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHH
Q psy8912 377 KDSKIKYKDMVFFDDEERNARS-ISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH 455 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dldh~~~s~-~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~ 455 (538)
+. .. + ..++.-+ .+.+ +.... .. ....+.-.......++||+.++|+.|+ +|+++ ++|++... ...
T Consensus 85 ~~-~~-~--~~~~~~~--~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~-~~~ 151 (259)
T 2ho4_A 85 QK-QV-R--PMLLLDD--RALPEFTGVQ---TQ-DPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARY-YKR 151 (259)
T ss_dssp HH-TC-C--EEEESCG--GGGGGGTTCC---CS-SCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSE-EEE
T ss_pred Hc-CC-e--EEEEeCH--HHHHHHHHcC---CC-CCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCc-Ccc
Confidence 00 00 0 1112111 0000 00000 00 000000011112347899999999999 99999 99988654 445
Q ss_pred HHHhhcCCccccccc------ee--ecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECCCC
Q psy8912 456 QLVDLFNWNQHFDHK------EI--FPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 456 ~~L~~lgL~~yFd~~------~i--~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~ 522 (538)
..+..+++.+||+.. .. ...+++..|..+++++|++|++|++|||+. +|+.+|+++|+.+++|.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~ 227 (259)
T 2ho4_A 152 KDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGK 227 (259)
T ss_dssp TTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred cCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence 567888998888611 11 123567889999999999999999999998 99999999999999999984
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.35 E-value=3.7e-12 Score=120.78 Aligned_cols=104 Identities=7% Similarity=-0.038 Sum_probs=89.4
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhC-C
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATG-I 490 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lg-i 490 (538)
.+.....++||+.++|++|+++ ++++++|++.. ..++..|+.+|+.+||+...... .+++..|.++++++| +
T Consensus 97 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~ 174 (238)
T 3ed5_A 97 FLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVS-HTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQF 174 (238)
T ss_dssp HHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCH-HHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTC
T ss_pred HHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCC
Confidence 3444578999999999999999 99999998875 47788999999999999432211 245777999999999 9
Q ss_pred CCCcEEEEeccc-ccHHhHcccCCEEEEECCCC
Q psy8912 491 EYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 491 ~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|++|++|||+. +|+++|+++|+.+++|.+|.
T Consensus 175 ~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~ 207 (238)
T 3ed5_A 175 SAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDM 207 (238)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTC
T ss_pred ChhHeEEECCCcHHHHHHHHHCCCEEEEECCCC
Confidence 999999999998 99999999999999998873
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.3e-13 Score=123.92 Aligned_cols=110 Identities=13% Similarity=0.133 Sum_probs=91.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh------cCCccccccceee-----cCCchHHHHHHHHHhCC
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL------FNWNQHFDHKEIF-----PGQKTTHFANLKKATGI 490 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~------lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi 490 (538)
..++||+.++|++|++ |++++++|++... .+...++. +|+..||+..... ..++++.|.++++++|+
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~-~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 165 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPY-VLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGM 165 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHH-HHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCC
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHH-HHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCC
Confidence 4689999999999999 9999999988754 77888888 8999999943321 12456689999999999
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHHh
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 536 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~~ 536 (538)
+|++|++|||+.+|+.+|+++|+.++.+.++... .+.|++|.+
T Consensus 166 ~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~---~~~l~~~l~ 208 (211)
T 2i6x_A 166 KPEETLFIDDGPANVATAERLGFHTYCPDNGENW---IPAITRLLR 208 (211)
T ss_dssp CGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCC---HHHHHHHHT
T ss_pred ChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHH---HHHHHHHHh
Confidence 9999999999999999999999999999988654 445555543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.8e-12 Score=127.48 Aligned_cols=101 Identities=13% Similarity=0.124 Sum_probs=88.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+++|++++|+|++.. .+...|+.+|+.+||+..... ..+++..|..+++++|++|++|
T Consensus 104 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~--~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 181 (263)
T 3k1z_A 104 TWQVLDGAEDTLRECRTRGLRLAVISNFDR--RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA 181 (263)
T ss_dssp GEEECTTHHHHHHHHHHTTCEEEEEESCCT--THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cceECcCHHHHHHHHHhCCCcEEEEeCCcH--HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 357999999999999999999999998764 358899999999999943322 1245777999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|||+. +|+++|+++|+.++++.++..
T Consensus 182 ~~vGD~~~~Di~~a~~aG~~~i~~~~~~~ 210 (263)
T 3k1z_A 182 AHVGDNYLCDYQGPRAVGMHSFLVVGPQA 210 (263)
T ss_dssp EEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred EEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence 9999997 999999999999999999854
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.8e-13 Score=137.10 Aligned_cols=177 Identities=12% Similarity=0.126 Sum_probs=124.7
Q ss_pred HHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccccccCcchhhhhhhhcccCcCCCccceEEeecC----C----
Q psy8912 322 VKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFFDDE----E---- 393 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Dld----h---- 393 (538)
+..++.+|++..+|+=.++. -...+++++|+...+... .+-+..+.+++||+| +
T Consensus 63 ~~~~~~~g~~v~~atGr~~~-~l~~~~~~~gld~~~~~~-----------------~~~i~~~~~viFD~DgTLi~~~~~ 124 (335)
T 3n28_A 63 LDMWKVGRYEVALMDGELTS-EHETILKALELDYARIQD-----------------VPDLTKPGLIVLDMDSTAIQIECI 124 (335)
T ss_dssp EEEEEETTEEEEEESSCCCH-HHHHHHHHHTCEEEECTT-----------------CCCTTSCCEEEECSSCHHHHHHHH
T ss_pred hheeecccceEEEecCCchH-HHHHHHHHcCCCEEEccC-----------------cccccCCCEEEEcCCCCCcChHHH
Confidence 34456779999998766666 667888999986533221 124556789999999 1
Q ss_pred ------CCc----CCC--------CCCcc------cccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 394 ------RNA----RSI--------SKLGV------IGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 394 ------~~~----s~~--------~p~~~------i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
... ..+ ..|.. -..........+.....+.++||+.++|++|+++|++++++|++.
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~ 204 (335)
T 3n28_A 125 DEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGF 204 (335)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBTTHHHHHHTTCCCCTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHhCCcCcCHHHHHHHHHHCCCEEEEEeCCc
Confidence 000 000 00000 000011122233344467899999999999999999999999886
Q ss_pred chHHHHHHHhhcCCccccccce-ee--------------cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCE
Q psy8912 450 EMLRAHQLVDLFNWNQHFDHKE-IF--------------PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 450 ~~~~a~~~L~~lgL~~yFd~~~-i~--------------~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
. ..++.+++++|+..+|+... +. ..+|++.|.++++++|++|++|++|||+.+|+.+++++|+.
T Consensus 205 ~-~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~ 283 (335)
T 3n28_A 205 T-YFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLG 283 (335)
T ss_dssp H-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred H-HHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 4 48899999999998887321 10 12467779999999999999999999999999999999997
Q ss_pred EEE
Q psy8912 515 CIH 517 (538)
Q Consensus 515 ~i~ 517 (538)
++.
T Consensus 284 va~ 286 (335)
T 3n28_A 284 VAY 286 (335)
T ss_dssp EEE
T ss_pred EEe
Confidence 765
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=123.26 Aligned_cols=102 Identities=9% Similarity=0.105 Sum_probs=89.1
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCc--hHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQK--TTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k--~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++ ++++++|++.. ..++..|+.+|+.+||+...... ..| ++.|.++++++|++|++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 157 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRR-NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQN 157 (209)
T ss_dssp GGCEECTTHHHHHHHSCTT-SEEEEECSSCH-HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGG
T ss_pred ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCH-HHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCccc
Confidence 4577999999999999999 99999998874 47888999999999999432221 245 78899999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|||+.+|+++|+++|+.++++.||..
T Consensus 158 ~i~vGD~~~Di~~a~~aG~~~~~~~~~~~ 186 (209)
T 2hdo_A 158 ALFIGDSVSDEQTAQAANVDFGLAVWGMD 186 (209)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEEGGGCC
T ss_pred EEEECCChhhHHHHHHcCCeEEEEcCCCC
Confidence 99999999999999999999999998764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-12 Score=123.38 Aligned_cols=95 Identities=12% Similarity=0.125 Sum_probs=81.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee---e--cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---F--PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i---~--~~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++ ++++++|++.. ..++..++.+|+. |+.... . ..+++..|.++++++|++|++|
T Consensus 118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 118 RLRPWPDTLAGMHALKAD-YWLAALSNGNT-ALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp SCEECTTHHHHHHHHTTT-SEEEECCSSCH-HHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 456799999999999986 99999998865 4778899999985 773221 1 1256788999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEEC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
++|||+.+|+++|+++|+.++.+.
T Consensus 194 ~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 194 MLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEEC
T ss_pred EEEcCchHhHHHHHHCCCeEEEEe
Confidence 999999999999999999999998
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=129.90 Aligned_cols=140 Identities=14% Similarity=0.041 Sum_probs=96.2
Q ss_pred CCCceEEEeCCCCCChhh--Hhhhh---chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc--HHHH
Q psy8912 14 KFPKMVVFDLDYTLWPLH--VHDLV---APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--ILHA 86 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~--~~~~i---~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~--p~~~ 86 (538)
.++++|+||+||||++.. ..... .++...+..... .....++||+.++|+.|+++|++++|+||++. ...+
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWIN--KAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHH--HCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHH--cCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHH
Confidence 357999999999997643 11111 222222222222 23467999999999999999999999999873 1567
Q ss_pred HHHHHHcCCC--CCCcceeecCC-CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHh-------h---------cCCeE
Q psy8912 87 KQILNLINLN--QYFSNKEIYPG-QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS-------P---------LGVTC 147 (538)
Q Consensus 87 ~~~L~~lgL~--~~Fd~ie~~~~-~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk-------~---------aG~~t 147 (538)
...|+.+|+. .+|+.+..... .||.....+.+ .+. +.|+||||+.+|+.+|+ + +|+++
T Consensus 135 ~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~~~~~~-~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~ 211 (258)
T 2i33_A 135 IKNLERVGAPQATKEHILLQDPKEKGKEKRRELVS-QTH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKF 211 (258)
T ss_dssp HHHHHHHTCSSCSTTTEEEECTTCCSSHHHHHHHH-HHE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTE
T ss_pred HHHHHHcCCCcCCCceEEECCCCCCCcHHHHHHHH-hCC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCce
Confidence 7788999998 66775422221 35655544432 332 44999999999999993 4 79999
Q ss_pred EEECCCCCchH
Q psy8912 148 IHSWLMMSSGR 158 (538)
Q Consensus 148 I~V~~G~~~~~ 158 (538)
|.++++.....
T Consensus 212 i~lpn~~y~~w 222 (258)
T 2i33_A 212 IIFPNPMYGDW 222 (258)
T ss_dssp EECCCCSSSHH
T ss_pred EECCCCCcchh
Confidence 99998765443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-12 Score=125.71 Aligned_cols=103 Identities=12% Similarity=0.019 Sum_probs=90.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-cee---ec-C--CchHHHHHHHHHhCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEI---FP-G--QKTTHFANLKKATGIEY 492 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i---~~-~--~k~~~~~kal~~lgi~p 492 (538)
....++||+.++|++|+++|++++++|++.. ..++..|+.+|+.+||+. ... .. . +++..|.++++++|++|
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSER-GRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP 185 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCH-HHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH
Confidence 5688999999999999999999999998875 478899999999999985 322 11 2 45777999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.+++|.+|..
T Consensus 186 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~ 216 (259)
T 4eek_A 186 ERCVVIEDSVTGGAAGLAAGATLWGLLVPGH 216 (259)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEECCTTS
T ss_pred HHEEEEcCCHHHHHHHHHCCCEEEEEccCCC
Confidence 9999999999999999999999999988743
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-13 Score=132.53 Aligned_cols=136 Identities=13% Similarity=0.096 Sum_probs=100.3
Q ss_pred CCccceEEeecC----CCCcCCCCCCcc-cccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHH
Q psy8912 381 IKYKDMVFFDDE----ERNARSISKLGV-IGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH 455 (538)
Q Consensus 381 ~~~~~l~~~Dld----h~~~s~~~p~~~-i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~ 455 (538)
...+-++||||| |......+++.. +.+..... .+...+.++||+.++|++|++. ++++|+|++.+ .+++
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~----~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~-~~a~ 98 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGT----IHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLA-KYAD 98 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTE----EEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCc----eeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCH-HHHH
Confidence 356789999999 533221212211 11111110 1223478899999999999998 99999999975 5999
Q ss_pred HHHhhcCCccccccceeecC---CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 456 QLVDLFNWNQHFDHKEIFPG---QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 456 ~~L~~lgL~~yFd~~~i~~~---~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
.+|+.+++.+||+....... .| +.|.++++++|.+|++||+|||+..++.+++++|+.++...+..+
T Consensus 99 ~vl~~ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~~~ 168 (195)
T 2hhl_A 99 PVADLLDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMT 168 (195)
T ss_dssp HHHHHHCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSCTT
T ss_pred HHHHHhCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCCCC
Confidence 99999999999984322211 22 568899999999999999999999999999999999977765443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-12 Score=125.95 Aligned_cols=105 Identities=12% Similarity=0.112 Sum_probs=87.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHh-hcCCccccccceeec-------CCchHHHHHHHHHhCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD-LFNWNQHFDHKEIFP-------GQKTTHFANLKKATGIE 491 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~-~lgL~~yFd~~~i~~-------~~k~~~~~kal~~lgi~ 491 (538)
....++||+.++|++|+++|++++++|++... .+...|. .+|+.+||+...... .++++.|.++++++|++
T Consensus 109 ~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~-~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~ 187 (250)
T 3l5k_A 109 PTAALMPGAEKLIIHLRKHGIPFALATSSRSA-SFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPP 187 (250)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHH-HHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSC
T ss_pred ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHH-HHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCC
Confidence 35789999999999999999999999988744 5555564 468999999433222 14567799999999999
Q ss_pred C--CcEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 492 Y--KDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 492 p--ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
| ++|++|||+.+|+++|+++|+.+++|.+|....
T Consensus 188 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~ 223 (250)
T 3l5k_A 188 PAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR 223 (250)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCG
T ss_pred CCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCch
Confidence 8 999999999999999999999999999986543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.32 E-value=6.8e-12 Score=118.86 Aligned_cols=102 Identities=20% Similarity=0.252 Sum_probs=88.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++ ++++++|++.. ..++..++.+|+.+||+..... ..+++..|.++++++|++|++|
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDT-EQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCH-HHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 467899999999999999 99999998875 4788899999999999943222 1245677999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+. +|+++|+++|+.+++|.+|...
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~ 205 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEK 205 (234)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECSSSTT
T ss_pred EEEcCCcHHHHHHHHHcCCEEEEECCCCCc
Confidence 9999997 9999999999999999987543
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.31 E-value=5.7e-12 Score=122.54 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=85.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+ |++++++|+++.. .++..|+.+|+..||+..... ..++++.|.++++++|++|++|
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 167 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPD-MLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHH-HHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeCcCHH-HHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 4689999999999999 9999999998754 788899999999999943221 1245667999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++|||+.+|+++|+++|+.++.+.+
T Consensus 168 ~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 168 LFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECC
T ss_pred EEEeCChhhHHHHHHCCCEEEEECC
Confidence 9999999999999999999999987
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.8e-12 Score=114.92 Aligned_cols=92 Identities=11% Similarity=0.139 Sum_probs=80.3
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccc
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEER 503 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~ 503 (538)
+.|+..++|++|+++|++++++|+++.. .++..++++|+..||+. ..+++..|.++++++|++|++|+||||+.+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~-~~~~~l~~~gl~~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSA-PLITRLKELGVEEIYTG----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCH-HHHHHHHHTTCCEEEEC----C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcH-HHHHHHHHcCCHhhccC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 3467799999999999999999998765 88899999999999983 457888899999999999999999999999
Q ss_pred cHHhHcccCCEEEEECCC
Q psy8912 504 NSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 504 ~I~aAk~aGi~~i~V~dg 521 (538)
|+.+|+++|+.++ +.++
T Consensus 112 Di~~a~~ag~~~~-~~~~ 128 (162)
T 2p9j_A 112 DIEVMKKVGFPVA-VRNA 128 (162)
T ss_dssp GHHHHHHSSEEEE-CTTS
T ss_pred HHHHHHHCCCeEE-ecCc
Confidence 9999999999866 4444
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=8.8e-12 Score=113.93 Aligned_cols=82 Identities=10% Similarity=0.157 Sum_probs=75.3
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++++|+++.. .++.+++++|+..||+. ..+|+..+.++++++|++|++|+||||+.+|+.+|++
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~-~~~~~~~~~gl~~~~~~----~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 113 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTE-IVRRRAEKLKVDYLFQG----VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKR 113 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCH-HHHHHHHHTTCSEEECS----CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTT
T ss_pred HHHHHHHCCCEEEEEeCCChH-HHHHHHHHcCCCEeecc----cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 899999999999999998765 88999999999999984 2678888999999999999999999999999999999
Q ss_pred cCCEEEE
Q psy8912 511 LGVTCIH 517 (538)
Q Consensus 511 aGi~~i~ 517 (538)
+|+.++.
T Consensus 114 ag~~~~~ 120 (164)
T 3e8m_A 114 VGIAGVP 120 (164)
T ss_dssp SSEEECC
T ss_pred CCCeEEc
Confidence 9997764
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.1e-12 Score=119.70 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=84.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---c--CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---P--GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~--~~k~~~~~kal~~lgi~pee~ 495 (538)
+..++||+.+ |++|+++ ++++++|+++. ..++..|+++|+.+||+..... . .++++.|.++++++| |++|
T Consensus 72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~ 146 (201)
T 2w43_A 72 NLKAYEDTKY-LKEISEI-AEVYALSNGSI-NEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEA 146 (201)
T ss_dssp TCEECGGGGG-HHHHHHH-SEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCC
T ss_pred ccccCCChHH-HHHHHhC-CeEEEEeCcCH-HHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcE
Confidence 3789999999 9999999 99999998875 4788899999999999943221 1 245777999999999 9999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++|||+.+|+++|+++|+.+++|.+|.
T Consensus 147 ~~vGD~~~Di~~a~~aG~~~~~~~~~~ 173 (201)
T 2w43_A 147 FLVSSNAFDVIGAKNAGMRSIFVNRKN 173 (201)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEeCCHHHhHHHHHCCCEEEEECCCC
Confidence 999999999999999999999998864
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=5.7e-12 Score=124.51 Aligned_cols=103 Identities=21% Similarity=0.273 Sum_probs=89.0
Q ss_pred CCccCCCHHHHHHHHHHCCc--eEEEEeCCCchHHHHHHHhhcCCccccccceee---------cCCchHHHHHHHHHhC
Q psy8912 421 IIKYYRDVPAILKYLKQNNC--LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------PGQKTTHFANLKKATG 489 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~Gi--klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------~~~k~~~~~kal~~lg 489 (538)
.+.++||+.++|++|+++|+ +++|+|++.. ..++..++.+|+.++|+..... ..++++.|.++++++|
T Consensus 140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYK-NHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCH-HHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred ccCcChhHHHHHHHHHhCCCCceEEEEECCCh-HHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 46789999999999999999 9999998875 4788899999999999943211 1356777999999999
Q ss_pred CCC-CcEEEEecccccHHhHcccCC-EEEEECCCCCH
Q psy8912 490 IEY-KDMVFFDDEERNSHDVSPLGV-TCIHVKDGMSH 524 (538)
Q Consensus 490 i~p-ee~l~~eDs~~~I~aAk~aGi-~~i~V~dg~t~ 524 (538)
++| ++|++|||+.+|+.+|+++|+ .++++..+...
T Consensus 219 i~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~ 255 (282)
T 3nuq_A 219 LARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVN 255 (282)
T ss_dssp CCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC-
T ss_pred CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccc
Confidence 999 999999999999999999999 89999887543
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-13 Score=125.30 Aligned_cols=104 Identities=24% Similarity=0.295 Sum_probs=87.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh-cCCccccccceee---cC--CchHHHHHHHHHhCCCCCcE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~-lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee~ 495 (538)
..++||+.++|++|+++|++++++|+++.. .++..++. +|+.+||+..... .. ++++.|.++++++|++|++|
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~-~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 168 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRL-HTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT 168 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCC-TTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChH-HHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 578999999999999999999999998755 55556766 7899999843221 12 34567999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
++|||+.+|+.+|+++|+.++.+.++.....
T Consensus 169 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~ 199 (206)
T 2b0c_A 169 VFFDDNADNIEGANQLGITSILVKDKTTIPD 199 (206)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred EEeCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence 9999999999999999999999998865443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.28 E-value=5.6e-12 Score=119.22 Aligned_cols=81 Identities=12% Similarity=0.174 Sum_probs=75.2
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++|+|+++.. .++.+++++|+.+||+.. .+|++.+.++++++|++|++|++|||+.+|+.++++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~-~~~~~~~~lgl~~~f~~~----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ 128 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTA-IVERRAKSLGIEHLFQGR----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRR 128 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCH-HHHHHHHHHTCSEEECSC----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChH-HHHHHHHHcCCHHHhcCc----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHH
Confidence 899999999999999999865 889999999999999943 788999999999999999999999999999999999
Q ss_pred cCCEEE
Q psy8912 511 LGVTCI 516 (538)
Q Consensus 511 aGi~~i 516 (538)
+|+.++
T Consensus 129 ag~~~~ 134 (189)
T 3mn1_A 129 VGLGMA 134 (189)
T ss_dssp SSEEEE
T ss_pred CCCeEE
Confidence 998754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=115.05 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=89.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++|++++++|++.. ..++..++.+|+..+|+...... .+++..+.++++++|++|++|
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~ 170 (226)
T 1te2_A 92 TRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 170 (226)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cCCcCccHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHe
Confidence 467899999999999999999999998864 47788999999999999432221 134778999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+.+|+++|+++|+.++.|.+|.+.
T Consensus 171 i~iGD~~nDi~~a~~aG~~~~~~~~~~~~ 199 (226)
T 1te2_A 171 VALEDSVNGMIASKAARMRSIVVPAPEAQ 199 (226)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCTTTT
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCCc
Confidence 99999999999999999999999998653
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.27 E-value=7.6e-12 Score=115.06 Aligned_cols=101 Identities=7% Similarity=0.032 Sum_probs=87.1
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++++|++... ... .++.+++.++|+..... .. +++..+.++++++|++|++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~-~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCchH-HHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 34678999999999999999999999988754 677 89999999999832221 12 3477899999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
|++|||+.+|+++|+++|+.++++.+|.
T Consensus 160 ~~~iGD~~nDi~~~~~aG~~~i~~~~~~ 187 (207)
T 2go7_A 160 TYYIGDRTLDVEFAQNSGIQSINFLEST 187 (207)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence 9999999999999999999999999875
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.4e-12 Score=123.13 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=85.6
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH------hhcCCccccccceee---cC--CchHHHHHHHHHhCCC
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV------DLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIE 491 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L------~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~ 491 (538)
.++||+.++|++|+++ ++++|+|+++.. .++.++ +.+|+.+||+..... .. ++++.|..+++++|++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~-~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDI-HWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHH-HHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChH-HHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 4679999999999999 999999988754 666444 888999999943221 12 4457799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
|++|++|||+.+|+++|+++|+.++.|.++....+
T Consensus 190 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 190 PKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999866543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.2e-12 Score=120.61 Aligned_cols=82 Identities=9% Similarity=0.124 Sum_probs=75.6
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++|+|+++.. .++.+++.+|+..||+.. .+|++.++++++++|++|++|++|||+.+|+.++++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~-~~~~~l~~lgi~~~f~~~----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ 158 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAK-LLEDRANTLGITHLYQGQ----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQ 158 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCH-HHHHHHHHHTCCEEECSC----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTT
T ss_pred HHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCCchhhccc----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHH
Confidence 899999999999999999765 889999999999999943 678999999999999999999999999999999999
Q ss_pred cCCEEEE
Q psy8912 511 LGVTCIH 517 (538)
Q Consensus 511 aGi~~i~ 517 (538)
+|+.++.
T Consensus 159 ag~~~a~ 165 (211)
T 3ij5_A 159 VGLSVAV 165 (211)
T ss_dssp SSEEEEC
T ss_pred CCCEEEe
Confidence 9987653
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-11 Score=115.21 Aligned_cols=97 Identities=10% Similarity=0.131 Sum_probs=84.0
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---c--CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---P--GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~--~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++ ++++++|+++.. |+.+|+.+||+..... . .+++..|.++++++|++|++
T Consensus 102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 174 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD------VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASA 174 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred ccCccCcCHHHHHHHHHhC-CeEEEEECCchh------hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchh
Confidence 3578999999999999999 999999988643 8899999999943322 1 24577799999999999999
Q ss_pred EEEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 495 MVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 495 ~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|||+. +|+++|+++|+.+++|.+|.+
T Consensus 175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~ 204 (230)
T 3vay_A 175 AVHVGDHPSDDIAGAQQAGMRAIWYNPQGK 204 (230)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTTCC
T ss_pred eEEEeCChHHHHHHHHHCCCEEEEEcCCCC
Confidence 99999997 999999999999999988754
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.7e-12 Score=121.22 Aligned_cols=176 Identities=11% Similarity=0.095 Sum_probs=117.3
Q ss_pred ccccccccccc---cccchHHHHHHhhhcCcceeeeccccc--cchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 303 RVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTVH--IRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 303 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
-+-|-+|||.+ .++.+.+.++.|+++|++..+++.... .......+..+|+.. ...+++....-..+
T Consensus 6 i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~------ 77 (250)
T 2c4n_A 6 VICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV--PDSVFYTSAMATAD------ 77 (250)
T ss_dssp EEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC--CGGGEEEHHHHHHH------
T ss_pred EEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCC--CHHHeEcHHHHHHH------
Confidence 46788999975 356667789999999999988873221 111222222233320 01111111000000
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEE--------------
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVA-------------- 443 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikla-------------- 443 (538)
....+.....++||+.++|+.|+++|++++
T Consensus 78 ------------------------------------~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~ 121 (250)
T 2c4n_A 78 ------------------------------------FLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRS 121 (250)
T ss_dssp ------------------------------------HHHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTT
T ss_pred ------------------------------------HHHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCC
Confidence 011122335578899999999999999999
Q ss_pred -------------------EEeCCCchHHHHHHHhhcC-Cccccccc---ee--ecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 444 -------------------AASRTTEMLRAHQLVDLFN-WNQHFDHK---EI--FPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 444 -------------------IASss~~~~~a~~~L~~lg-L~~yFd~~---~i--~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
++|+.. + .....++.+| +..+|+.. ++ ...+|+..|.++++++|++|++|++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~i~t~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~i 199 (250)
T 2c4n_A 122 YNWDMMHKAAYFVANGARFIATNPD-T-HGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIV 199 (250)
T ss_dssp CCHHHHHHHHHHHHTTCEEEESCCC-S-BSSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCC-C-CCCCeeecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 888765 3 3344556666 55666621 22 23367888999999999999999999
Q ss_pred ecc-cccHHhHcccCCEEEEECCCCCH
Q psy8912 499 DDE-ERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 499 eDs-~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
||+ .+|+++|+++|+.+++|.+|.+.
T Consensus 200 GD~~~nDi~~~~~aG~~~~~v~~g~~~ 226 (250)
T 2c4n_A 200 GDNLRTDILAGFQAGLETILVLSGVSS 226 (250)
T ss_dssp ESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred CCCchhHHHHHHHcCCeEEEECCCCCC
Confidence 999 79999999999999999998764
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=116.06 Aligned_cols=97 Identities=20% Similarity=0.218 Sum_probs=82.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++++|++ . .++..++.+|+.+||+..... .. ++++.|..+++++|++|++|
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~-~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 165 (221)
T 2wf7_A 89 PADVYPGILQLLKDLRSNKIKIALASAS--K-NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCC--T-THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEcCc--H-HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence 3568999999999999999999999987 2 457789999999999942221 11 34568999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++|||+.+|+++|+++|+.++++..
T Consensus 166 i~iGD~~nDi~~a~~aG~~~~~~~~ 190 (221)
T 2wf7_A 166 IGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EEEeCCHHHHHHHHHCCCEEEEECC
Confidence 9999999999999999999999853
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=118.65 Aligned_cols=103 Identities=11% Similarity=-0.008 Sum_probs=88.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-ccceee-----cCCchHHHHHHHHHhCCCC-
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEIF-----PGQKTTHFANLKKATGIEY- 492 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~~i~-----~~~k~~~~~kal~~lgi~p- 492 (538)
....++||+.++|+.|+++|++++++|++.. ..+...++.+|+..+| +..... ..+++..|.++++++|++|
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 178 (267)
T 1swv_A 100 RYASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPM 178 (267)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSG
T ss_pred cccccCccHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCC
Confidence 3467899999999999999999999998764 4778889999998886 632221 2257888999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.+++|.+|..
T Consensus 179 ~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 179 NHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred cCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 9999999999999999999999999999865
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=113.18 Aligned_cols=80 Identities=8% Similarity=0.057 Sum_probs=72.9
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++|+|++... .++.+++.+|+. +|.. ..+|+..+.++++++|++|++|++|||+.+|+.++++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~-~~~~~~~~lgi~-~~~~----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ 120 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNP-VVAARARKLKIP-VLHG----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFAL 120 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCH-HHHHHHHHHTCC-EEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChH-HHHHHHHHcCCe-eEeC----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence 899999999999999998765 889999999998 7763 2678999999999999999999999999999999999
Q ss_pred cCCEEE
Q psy8912 511 LGVTCI 516 (538)
Q Consensus 511 aGi~~i 516 (538)
+|+.++
T Consensus 121 ag~~v~ 126 (176)
T 3mmz_A 121 VGWPVA 126 (176)
T ss_dssp SSEEEE
T ss_pred CCCeEE
Confidence 997654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=120.71 Aligned_cols=107 Identities=11% Similarity=0.053 Sum_probs=90.4
Q ss_pred cCCCCccCCCHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCC-
Q psy8912 418 GGAIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGI- 490 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~-GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi- 490 (538)
+.....++||+.++|+.|+++ |++++++|++.. ..++..|+.+|+. +|+...... .++++.|.++++++|+
T Consensus 109 ~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~-~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~ 186 (275)
T 2qlt_A 109 YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTR-DMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFP 186 (275)
T ss_dssp HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCH-HHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCC
T ss_pred HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCH-HHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCC
Confidence 344577899999999999999 999999998875 4788899999986 577322211 2467789999999999
Q ss_pred ------CCCcEEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 491 ------EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 491 ------~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
+|++|++|||+.+|+++|+++|+.+++|.+|.+..+
T Consensus 187 ~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~ 228 (275)
T 2qlt_A 187 INEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDF 228 (275)
T ss_dssp CCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHH
T ss_pred ccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 999999999999999999999999999999977554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-11 Score=116.47 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=82.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccccce--------ee---------cCCchHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKE--------IF---------PGQKTTHF 481 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd~~~--------i~---------~~~k~~~~ 481 (538)
...++||+.++|++|+++|++++|+|+++. ..++.+|+++|+.. +|+... .+ ...|++.|
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 478999999999999999999999998875 48889999999984 776321 11 12477789
Q ss_pred HHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 482 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 482 ~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
.++++++|+ ++|++|||+.+|+.+|+++|+ +|++..+..
T Consensus 163 ~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~ 201 (225)
T 1nnl_A 163 KLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVI 201 (225)
T ss_dssp HHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCC
T ss_pred HHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccc
Confidence 999999998 899999999999999999999 888865433
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=114.12 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=88.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---c--CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---P--GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~--~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++|++++++|++.. ..++..++.+|+..+|+..... . .+++..|.++++++|++|++|
T Consensus 87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 165 (225)
T 3d6j_A 87 NTILFPDTLPTLTHLKKQGIRIGIISTKYR-FRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV 165 (225)
T ss_dssp GCEECTTHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHe
Confidence 466899999999999999999999998864 4788899999999999842221 1 245678999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|||+.+|+++|+.+|+.+++|.+|.+
T Consensus 166 i~iGD~~nDi~~~~~aG~~~~~~~~~~~ 193 (225)
T 3d6j_A 166 LYIGDSTVDAGTAAAAGVSFTGVTSGMT 193 (225)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEETTSSC
T ss_pred EEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 9999999999999999999999999754
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-12 Score=124.22 Aligned_cols=132 Identities=15% Similarity=0.070 Sum_probs=97.2
Q ss_pred CCceEEEeCCCCCChhhHhhhh-chhHHHHHHHHh-hhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMD-AKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~-~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
..+++|+|+||||+........ +.+.-. ..+-. .....+.++||+.++|+.|++. ++++|+|++.. .+++.+++.
T Consensus 27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~-~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~-~~a~~vl~~ 103 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSSFKPISNADFIVP-VEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLA-KYADPVADL 103 (195)
T ss_dssp TCCEEEECCBTTTEEEESSCCTTCSEEEE-EEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHH
T ss_pred CCeEEEEccccceEcccccCCCCccceee-eecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCH-HHHHHHHHH
Confidence 3579999999999653211100 000000 00000 0112367899999999999998 99999999998 999999999
Q ss_pred cCCCCCCcceeecC---CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 93 INLNQYFSNKEIYP---GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 93 lgL~~~Fd~ie~~~---~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
++...+|+.+.... ..| +.|.++++++|.+|++|++|||+..++.++.++|+.++.+
T Consensus 104 ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~ 163 (195)
T 2hhl_A 104 LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSW 163 (195)
T ss_dssp HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCC
T ss_pred hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeee
Confidence 99999998762111 112 6788999999999999999999999999999999986444
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.9e-11 Score=112.40 Aligned_cols=97 Identities=8% Similarity=0.057 Sum_probs=84.0
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
.++||+.++|++|+++|++++++|++. . .++..++.+|+.+||+..... ..++++.|.++++++|++ +|++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRN-D-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSC-T-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCc-H-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 389999999999999999999999875 3 678899999999999842221 125678899999999998 9999
Q ss_pred EecccccHHhHcccCCEEEEECCCCC
Q psy8912 498 FDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 498 ~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|||+.+|+++|+++|+.++++.++..
T Consensus 158 iGD~~~Di~~a~~aG~~~~~~~~~~~ 183 (190)
T 2fi1_A 158 IGDRPIDIEAGQAAGLDTHLFTSIVN 183 (190)
T ss_dssp EESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred EcCCHHHHHHHHHcCCeEEEECCCCC
Confidence 99999999999999999999988643
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.5e-12 Score=119.75 Aligned_cols=96 Identities=20% Similarity=0.152 Sum_probs=80.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+++|++++++|++. . .++..|+.+|+.+||+...... . ++++.|.++++++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~-~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNAS-P-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCH-H-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCc-H-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 46799999999999999999999999875 3 4788999999999999432211 1 33556999999999999
Q ss_pred EEEecccc-cHHhHcccCCEEEEECCC
Q psy8912 496 VFFDDEER-NSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~-~I~aAk~aGi~~i~V~dg 521 (538)
++|||+.+ |+++|+++|+.++.|.++
T Consensus 168 ~~vgD~~~~Di~~a~~aG~~~i~v~~~ 194 (220)
T 2zg6_A 168 VHVGDIYELDYIGAKRSYVDPILLDRY 194 (220)
T ss_dssp EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence 99999999 999999999999999864
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.22 E-value=8.3e-12 Score=123.14 Aligned_cols=209 Identities=11% Similarity=0.094 Sum_probs=128.5
Q ss_pred cccccccccc---cccchHHHHHHhhhcCcceeeec-cccc-cchhhhHHhhhCCCcccccccccCcchhhhhh-hhccc
Q psy8912 304 VEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALAS-RTVH-IRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHF-ANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 377 (538)
+-|-+|||.+ .+|.+.+.+++|+++|++.+++| |+.. .......|..+|+.- ..++++.+..-+.++ +....
T Consensus 5 ~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~--~~~~i~~~~~~~~~~l~~~~~ 82 (263)
T 1zjj_A 5 IFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDV--SSSIIITSGLATRLYMSKHLD 82 (263)
T ss_dssp EEECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCC--CGGGEEEHHHHHHHHHHHHSC
T ss_pred EEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC--ChhhEEecHHHHHHHHHHhCC
Confidence 4577788863 46899999999999999999999 5432 222223334567752 346777773333332 22211
Q ss_pred CcCCCccceEEeecC-------CCCcCCCC-CCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 378 DSKIKYKDMVFFDDE-------ERNARSIS-KLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld-------h~~~s~~~-p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
...+.++--+ ...+...+ .-...........+...+ ....+||++.++|+.|+ +|+++ ++|+++
T Consensus 83 -----~~~v~viG~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~v~~g~-~~~~~~~~~~~~l~~L~-~g~~~-i~tn~~ 154 (263)
T 1zjj_A 83 -----PGKIFVIGGEGLVKEMQALGWGIVTLDEARQGSWKEVKHVVVGL-DPDLTYEKLKYATLAIR-NGATF-IGTNPD 154 (263)
T ss_dssp -----CCCEEEESCHHHHHHHHHHTSCBCCHHHHHTTGGGGCCEEEECC-CTTCBHHHHHHHHHHHH-TTCEE-EESCCC
T ss_pred -----CCEEEEEcCHHHHHHHHHcCCeeccCCcccccccCCCCEEEEec-CCCCCHHHHHHHHHHHH-CCCEE-EEECCC
Confidence 1223333222 11110000 000000000011111112 34568999999999999 89999 999886
Q ss_pred chHHH--HHHHhh-cCCcccccccee-----ecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECC
Q psy8912 450 EMLRA--HQLVDL-FNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 450 ~~~~a--~~~L~~-lgL~~yFd~~~i-----~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~d 520 (538)
.. .. ...+.. .++.+||+.... ...+++..|..++++ ++|++|++|||+. +||.+|+++|+.++.|.+
T Consensus 155 ~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 231 (263)
T 1zjj_A 155 AT-LPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLT 231 (263)
T ss_dssp SE-EEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred cc-ccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECC
Confidence 53 22 223444 567778873211 223557779999998 9999999999995 999999999999999999
Q ss_pred CCCHH
Q psy8912 521 GMSHS 525 (538)
Q Consensus 521 g~t~~ 525 (538)
|.+..
T Consensus 232 g~~~~ 236 (263)
T 1zjj_A 232 GVSSL 236 (263)
T ss_dssp SSCCH
T ss_pred CCCCh
Confidence 87643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=4.6e-12 Score=134.05 Aligned_cols=103 Identities=18% Similarity=0.179 Sum_probs=82.7
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCC--CchHHHHHHHhhc--CCccccccceee-----cCCchHHHHHHHHHhCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRT--TEMLRAHQLVDLF--NWNQHFDHKEIF-----PGQKTTHFANLKKATGI 490 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss--~~~~~a~~~L~~l--gL~~yFd~~~i~-----~~~k~~~~~kal~~lgi 490 (538)
....++||+.++|++|+++|++++|+|++ ... .....++.. ||.+|||.+... ..++++.|+++++++|+
T Consensus 97 ~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~-~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~ 175 (555)
T 3i28_A 97 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDR-AERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175 (555)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCS-TTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred hhcCcChhHHHHHHHHHHCCCEEEEEeCCCcccc-chhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 34789999999999999999999999987 111 112234433 888999953332 12456679999999999
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|++|||+.+|+++|+++|+.++.+.++.+
T Consensus 176 ~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~ 208 (555)
T 3i28_A 176 SPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 208 (555)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCEEEECSSHHH
T ss_pred ChhHEEEECCcHHHHHHHHHcCCEEEEECCCcc
Confidence 999999999999999999999999999988644
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-12 Score=124.41 Aligned_cols=132 Identities=9% Similarity=0.050 Sum_probs=96.0
Q ss_pred CCccceEEeecC----CCCcCCCCCCcc-cccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHH
Q psy8912 381 IKYKDMVFFDDE----ERNARSISKLGV-IGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH 455 (538)
Q Consensus 381 ~~~~~l~~~Dld----h~~~s~~~p~~~-i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~ 455 (538)
...+-++|+||| |......+++.. +.+...+. .+...+.++||+.++|++|++. ++++|+|++.. .+++
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~----~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~-~~a~ 85 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGV----VHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYAD 85 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTE----EEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCe----eEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCH-HHHH
Confidence 456679999999 533221122221 11111110 1223478999999999999998 99999999975 5999
Q ss_pred HHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 456 QLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 456 ~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
.+|+.+++.+||+....... .....|.+.++++|.+|++||+|||+..++.++.++|+.+...
T Consensus 86 ~vl~~ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~ 150 (181)
T 2ght_A 86 PVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASW 150 (181)
T ss_dssp HHHHHHCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCC
T ss_pred HHHHHHCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEeccc
Confidence 99999999999984222111 1124588899999999999999999999999999999996433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.2e-12 Score=130.18 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=86.9
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
..++||+.++|+.|+++|++++++||.+. ..++.+++.+|+.++|+.+. |+.+..++++++.+|++|+||||+
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~~~~------p~~k~~~~~~l~~~~~~~~~VGD~ 207 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKE-DKVKELSKELNIQEYYSNLS------PEDKVRIIEKLKQNGNKVLMIGDG 207 (263)
Confidence 35889999999999999999999999988 89999999999999998742 667788999999999999999999
Q ss_pred cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEE
Q psy8912 134 ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIY 172 (538)
Q Consensus 134 ~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii 172 (538)
.+|+.+|+++|+. +.+|.... .....+|+++
T Consensus 208 ~~D~~aa~~Agv~---va~g~~~~-----~~~~~ad~v~ 238 (263)
T 2yj3_A 208 VNDAAALALADVS---VAMGNGVD-----ISKNVADIIL 238 (263)
Confidence 9999999999965 44443221 2223567776
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.3e-11 Score=117.93 Aligned_cols=97 Identities=8% Similarity=0.058 Sum_probs=81.9
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee----------e-----cCCchHHHHHHHHH
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----------F-----PGQKTTHFANLKKA 487 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i----------~-----~~~k~~~~~kal~~ 487 (538)
.++||+.++|++|+++|++++|+|++... .++.+++.+|+..+|..... . ...|+..+..++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSF-VTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 57999999999999999999999998754 88999999999877762211 1 11356668899999
Q ss_pred hC---CCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 488 TG---IEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 488 lg---i~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+| ++|++|++|||+.+|+.+++++|+.++..++
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 99 9999999999999999999999999876554
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=4e-11 Score=112.09 Aligned_cols=89 Identities=15% Similarity=0.113 Sum_probs=79.4
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccc
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEER 503 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~ 503 (538)
+.+...++|++|+++|++++++|+.+.. .++..++.+|+..||+. ..+|+..+.++++++|++|++|++|||+.+
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~-~~~~~~~~lgl~~~~~~----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~ 110 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSP-ILRRRIADLGIKLFFLG----KLEKETACFDLMKQAGVTAEQTAYIGDDSV 110 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCH-HHHHHHHHHTCCEEEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcH-HHHHHHHHcCCceeecC----CCCcHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 3456678999999999999999998765 88899999999999873 457888899999999999999999999999
Q ss_pred cHHhHcccCCEEEE
Q psy8912 504 NSHDVSPLGVTCIH 517 (538)
Q Consensus 504 ~I~aAk~aGi~~i~ 517 (538)
|+.+++++|+.++.
T Consensus 111 Di~~~~~ag~~~~~ 124 (180)
T 1k1e_A 111 DLPAFAACGTSFAV 124 (180)
T ss_dssp GHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCeEEe
Confidence 99999999998764
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-12 Score=123.69 Aligned_cols=90 Identities=7% Similarity=0.011 Sum_probs=78.0
Q ss_pred CCCccCCCHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 420 AIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~-GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
....++||+.++|++|+++ |++++|+|+++.. .++..|+++|+ |+. +.+. .+++++|++|++|+||
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~-~~~~~l~~~gl---f~~--i~~~-------~~~~~~~~~~~~~~~v 136 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLLK-YHHCVGEKYRW---VEQ--HLGP-------QFVERIILTRDKTVVL 136 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSS-CTTTHHHHHHH---HHH--HHCH-------HHHTTEEECSCGGGBC
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCChh-hHHHHHHHhCc---hhh--hcCH-------HHHHHcCCCcccEEEE
Confidence 3578999999999999999 9999999998765 77888999998 773 2221 2788899999999999
Q ss_pred eccccc----HHhHc-ccCCEEEEECCCC
Q psy8912 499 DDEERN----SHDVS-PLGVTCIHVKDGM 522 (538)
Q Consensus 499 eDs~~~----I~aAk-~aGi~~i~V~dg~ 522 (538)
||+.+| +.+|+ ++|+.+|.++++.
T Consensus 137 gDs~~dD~~~i~~A~~~aG~~~i~~~~~~ 165 (193)
T 2i7d_A 137 GDLLIDDKDTVRGQEETPSWEHILFTCCH 165 (193)
T ss_dssp CSEEEESSSCCCSSCSSCSSEEEEECCGG
T ss_pred CCchhhCcHHHhhcccccccceEEEEecc
Confidence 999999 99999 9999999998753
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-11 Score=121.51 Aligned_cols=205 Identities=12% Similarity=0.107 Sum_probs=127.7
Q ss_pred cccccccccccc---cccchHHHHHHhhhcCcceeeeccccccc---hhhhHHhhhCCCcccccccccCcchhhh-hhhh
Q psy8912 302 DRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTVHIR---NAYSLLHLLGLSDFFDYKEIFPAEKKIK-HFAN 374 (538)
Q Consensus 302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 374 (538)
--+-|-.|||.+ .++.+.+.+..|++.|++..++|..+... .+..|...+|+.. ...+++.+..-.. .++.
T Consensus 7 ~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~ 84 (264)
T 1yv9_A 7 GYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV--PASLVYTATLATIDYMKE 84 (264)
T ss_dssp EEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC--CGGGEEEHHHHHHHHHHH
T ss_pred EEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC--ChhhEEcHHHHHHHHHHh
Confidence 457899999976 56778888999999999999987665432 2223333378753 2355665522222 2222
Q ss_pred cccCcCCCccceEEeecC-------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeC
Q psy8912 375 LKKDSKIKYKDMVFFDDE-------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASR 447 (538)
Q Consensus 375 ~~~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASs 447 (538)
... ...+.....+ ..++.... . ....+...+ ....++||+.++|+.|+ +|+++ |+|+
T Consensus 85 ~~~-----~~~~~~~g~~~l~~~l~~~g~~~~~--~------~~~~v~~~~-~~~~~~~~~~~~l~~l~-~g~~~-i~tn 148 (264)
T 1yv9_A 85 ANR-----GKKVFVIGEAGLIDLILEAGFEWDE--T------NPDYVVVGL-DTELSYEKVVLATLAIQ-KGALF-IGTN 148 (264)
T ss_dssp HCC-----CSEEEEESCHHHHHHHHHTTCEECS--S------SCSEEEECC-CTTCCHHHHHHHHHHHH-TTCEE-EESC
T ss_pred hCC-----CCEEEEEeCHHHHHHHHHcCCcccC--C------CCCEEEEEC-CCCcCHHHHHHHHHHHh-CCCEE-EEEC
Confidence 110 1111111111 11110000 0 001111112 34568999999999997 89998 9998
Q ss_pred CCchH-HHHH-HHhhcCCcccccccee---e--cCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEEC
Q psy8912 448 TTEML-RAHQ-LVDLFNWNQHFDHKEI---F--PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 448 s~~~~-~a~~-~L~~lgL~~yFd~~~i---~--~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V~ 519 (538)
++... .... +++..++..||+.... . ..+++..|..+++++|++|++|++|||+ .+|+.+|+++|+.++.|.
T Consensus 149 ~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~ 228 (264)
T 1yv9_A 149 PDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVT 228 (264)
T ss_dssp CCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred CCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEEC
Confidence 76520 0111 2344457778873211 1 2234567999999999999999999999 599999999999999999
Q ss_pred CCCCH
Q psy8912 520 DGMSH 524 (538)
Q Consensus 520 dg~t~ 524 (538)
+|...
T Consensus 229 ~g~~~ 233 (264)
T 1yv9_A 229 SGFTP 233 (264)
T ss_dssp TSSSC
T ss_pred CCCCC
Confidence 98754
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.7e-12 Score=125.49 Aligned_cols=215 Identities=13% Similarity=0.099 Sum_probs=130.5
Q ss_pred ccccccccccc---cccchHHHHHHhhhcCcceeeecc-cc-ccchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 303 RVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASR-TV-HIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 303 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
-+-|-+|||.+ ++|.+.+.++.|+++|++.+++|- ++ +.......+..+|+.. +...+++.+..=+..+- ++
T Consensus 24 i~~D~DGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~-~~~~~i~~~~~~~~~~l--~~ 100 (306)
T 2oyc_A 24 VLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG-LRAEQLFSSALCAARLL--RQ 100 (306)
T ss_dssp EEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCS-CCGGGEEEHHHHHHHHH--HH
T ss_pred EEECCCCcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCc-CChhhEEcHHHHHHHHH--Hh
Confidence 36788888864 788999999999999999999993 22 2333446677888752 22345554421111111 10
Q ss_pred CcCCC---ccceEEeecC---------CCCcCCCCCC-cccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEE
Q psy8912 378 DSKIK---YKDMVFFDDE---------ERNARSISKL-GVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAA 444 (538)
Q Consensus 378 ~~~~~---~~~l~~~Dld---------h~~~s~~~p~-~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaI 444 (538)
..+ ...-.++.+- ...+...... ..+........+.. ......++|++.++|+.|+++|+ +++
T Consensus 101 --~~~~~~~~~~~v~~~g~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~l~~l~~~g~-~~i 176 (306)
T 2oyc_A 101 --RLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLV-GYDEHFSFAKLREACAHLRDPEC-LLV 176 (306)
T ss_dssp --HCCSCSSSCCEEEEESCHHHHHHHHHTTCEETTSCCCC---CCCEEEEEE-CCCTTCCHHHHHHHHHHHTSTTS-EEE
T ss_pred --hCCccccCCCeEEEECCHHHHHHHHHCCCEeecccccccccCCCCCEEEE-eCCCCCCHHHHHHHHHHHHcCCC-EEE
Confidence 000 0000111111 0010000000 00000000001111 11335678999999999999999 999
Q ss_pred EeCCCchHHH--H-HHHhhcC-Cccccccc---ee--ecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCE
Q psy8912 445 ASRTTEMLRA--H-QLVDLFN-WNQHFDHK---EI--FPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVT 514 (538)
Q Consensus 445 ASss~~~~~a--~-~~L~~lg-L~~yFd~~---~i--~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~ 514 (538)
+|+++.. .. . ..+..+| +..+|+.. .. ...+++..|..+++++|++|++|++|||+. +||++|+++|+.
T Consensus 177 ~tn~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~ 255 (306)
T 2oyc_A 177 ATDRDPW-HPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 255 (306)
T ss_dssp ESCCCCE-EECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCE
T ss_pred EEcCCcc-ccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCe
Confidence 9988644 22 1 3455556 66777722 11 223567789999999999999999999996 999999999999
Q ss_pred EEEECCCCCHH
Q psy8912 515 CIHVKDGMSHS 525 (538)
Q Consensus 515 ~i~V~dg~t~~ 525 (538)
++.|.+|.+..
T Consensus 256 ~i~v~~g~~~~ 266 (306)
T 2oyc_A 256 TVLTLTGVSRL 266 (306)
T ss_dssp EEEESSSSCCH
T ss_pred EEEECCCCCCH
Confidence 99999997653
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.1e-11 Score=112.57 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=80.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHH---HHHhCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANL---KKATGIE 491 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~ka---l~~lgi~ 491 (538)
....++||+.++|++|++ |++++++|++... .+...++. +..||+...... .+.+..|..+ ++++|++
T Consensus 96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~-~~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~ 171 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRN-EFKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIE 171 (240)
T ss_dssp GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHH-HHHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChh-HHHHHHHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 346799999999999999 8999999988754 66777876 568999433221 2346668888 8889999
Q ss_pred CCcEEEEeccc-ccHHhHcccCCEEEEECCC
Q psy8912 492 YKDMVFFDDEE-RNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 492 pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg 521 (538)
|++|++|||+. +|+++|+++|+.++.+..+
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~ 202 (240)
T 3smv_A 172 KKDILHTAESLYHDHIPANDAGLVSAWIYRR 202 (240)
T ss_dssp GGGEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred chhEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence 99999999996 9999999999999999754
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.2e-11 Score=113.84 Aligned_cols=84 Identities=7% Similarity=0.039 Sum_probs=75.4
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHh
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHD 507 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~a 507 (538)
-...|++|+++|++++|+|+++.. .++.+++.+|+..||+. ..+|+..+.++++++|++|++|++|||+.+|+.+
T Consensus 57 d~~~l~~L~~~G~~~~ivT~~~~~-~~~~~l~~lgi~~~~~~----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~ 131 (195)
T 3n07_A 57 DGYGVKALMNAGIEIAIITGRRSQ-IVENRMKALGISLIYQG----QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPV 131 (195)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCH-HHHHHHHHTTCCEEECS----CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHH
T ss_pred cHHHHHHHHHCCCEEEEEECcCHH-HHHHHHHHcCCcEEeeC----CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHH
Confidence 344699999999999999998765 88999999999999984 2678888999999999999999999999999999
Q ss_pred HcccCCEEE
Q psy8912 508 VSPLGVTCI 516 (538)
Q Consensus 508 Ak~aGi~~i 516 (538)
++++|+.++
T Consensus 132 ~~~ag~~va 140 (195)
T 3n07_A 132 MEKVALRVC 140 (195)
T ss_dssp HTTSSEEEE
T ss_pred HHHCCCEEE
Confidence 999998764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.7e-11 Score=114.72 Aligned_cols=96 Identities=7% Similarity=0.066 Sum_probs=83.0
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee---e--cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---F--PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i---~--~~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|+.|+++ ++++++|++.. ..++..++.+|+. |+.... . ..+++..|.++++++|++|++
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 188 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNT-SLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGE 188 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSSSCH-HHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCH-HHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHH
Confidence 4578899999999999997 99999998864 4788899999986 773222 1 125677799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEEC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
|++|||+.+|+++|+++|+.++.+.
T Consensus 189 ~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 189 VMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHhHHHHHHCCCEEEEEe
Confidence 9999999999999999999999998
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=114.15 Aligned_cols=72 Identities=19% Similarity=0.244 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhhc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISKL 186 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~~ 186 (538)
+|+..+..+++++|++|++|++|||+.+|+.+++.+|+. +.+ |....+..+ .+++|+.+ ..+.+...+.+.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam--~na~~~~k~-----~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVT-IAM--KNSHQQLKD-----IATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEE-EEE--TTSCHHHHH-----HCSEEECCGGGTHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCce-EEe--cCccHHHHH-----hhhheeCCCchhHHHHHHHHh
Confidence 577889999999999999999999999999999999953 334 444444332 36788866 455666666665
Q ss_pred C
Q psy8912 187 G 187 (538)
Q Consensus 187 g 187 (538)
|
T Consensus 272 ~ 272 (274)
T 3fzq_A 272 N 272 (274)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-11 Score=113.52 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=82.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc-cceee-c-------CCchHHHHHHHHHhCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-HKEIF-P-------GQKTTHFANLKKATGIE 491 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd-~~~i~-~-------~~k~~~~~kal~~lgi~ 491 (538)
.+.++||+.++|++|+++ ++++|+|++.. ..++.+++++|+..||+ ..... . .+++..+..+++++++.
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChH-HHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 578999999999999999 99999998865 48889999999999994 32221 1 15677899999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEE
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
|++|++|||+.+|+.+|+++|+.++.
T Consensus 145 ~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred CCEEEEEeCChhhHHHHHhcCccEEE
Confidence 99999999999999999999998763
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-12 Score=123.98 Aligned_cols=89 Identities=9% Similarity=0.028 Sum_probs=80.9
Q ss_pred CCccCCCHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHhhcCCcc-ccccceeecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 421 IIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~-GiklaIASss~~~~~a~~~L~~lgL~~-yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
.+.++||+.++|++|+++ |++++|+|++... .++..|+++|+.+ ||+ ..+++++|++|++|+||
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~-~~~~~l~~~~l~~~~f~-------------~~~~~~l~~~~~~~~~v 138 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKM-FKYCPYEKYAWVEKYFG-------------PDFLEQIVLTRDKTVVS 138 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSC-CSSHHHHHHHHHHHHHC-------------GGGGGGEEECSCSTTSC
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccc-hHHHHHHHhchHHHhch-------------HHHHHHhccCCccEEEE
Confidence 578999999999999999 9999999999765 6677899999999 997 56778899999999999
Q ss_pred eccccc----HHhHc-ccCCEEEEECCCCC
Q psy8912 499 DDEERN----SHDVS-PLGVTCIHVKDGMS 523 (538)
Q Consensus 499 eDs~~~----I~aAk-~aGi~~i~V~dg~t 523 (538)
||+..| +++|+ ++|+.+|+++++.+
T Consensus 139 gDs~~dD~~~~~~a~~~aG~~~i~~~~~~~ 168 (197)
T 1q92_A 139 ADLLIDDRPDITGAEPTPSWEHVLFTACHN 168 (197)
T ss_dssp CSEEEESCSCCCCSCSSCSSEEEEECCTTT
T ss_pred CcccccCCchhhhcccCCCceEEEecCccc
Confidence 999999 99999 99999999998654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.8e-10 Score=112.35 Aligned_cols=70 Identities=16% Similarity=0.208 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
+|+..++.+++++|++|++|++|||+.+|+.+++.+|+. |..|.......+ .+|+|+.+ ..+.+...+.+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k~-----~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMG---VAMGNAQEPVKK-----AADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHHH-----HCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcE---EEcCCCcHHHHH-----hCCEEcCCCCCcHHHHHHHH
Confidence 678999999999999999999999999999999999953 444544444433 26777755 45555666655
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=5.4e-12 Score=123.96 Aligned_cols=204 Identities=12% Similarity=0.078 Sum_probs=127.4
Q ss_pred ccccccccccc---cccchHHHHHHhhhcCcceeeecccc--ccchhhhHHhhhCCCcccccccccCcc-hhhhhhhhcc
Q psy8912 303 RVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTV--HIRNAYSLLHLLGLSDFFDYKEIFPAE-KKIKHFANLK 376 (538)
Q Consensus 303 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 376 (538)
-+-|-+|||.+ ++|.+.+.++.|+++|++..+||..+ +.......+..+|+..- ..+++.+. --..+.+...
T Consensus 20 v~~DlDGTLl~~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~--~~~ii~~~~~~~~~~~~~~ 97 (271)
T 1vjr_A 20 FILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP--DDAVVTSGEITAEHMLKRF 97 (271)
T ss_dssp EEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCC--GGGEEEHHHHHHHHHHHHH
T ss_pred EEEcCcCcEEeCCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCC--hhhEEcHHHHHHHHHHHhC
Confidence 47799999984 57888899999999999999999332 23445567788887521 23344331 1112222211
Q ss_pred cCcCCCccceEEeecC-------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 377 KDSKIKYKDMVFFDDE-------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
.. ..+.+.... ..+.... ... ...+.. ......++|++.++|+.| ++|+++ ++|++.
T Consensus 98 ~~-----~~~~~~~~~~~~~~l~~~g~~~~-~~~-------~~~~~~-~~~~~~~~~~~~~~l~~l-~~~~~~-i~tn~~ 161 (271)
T 1vjr_A 98 GR-----CRIFLLGTPQLKKVFEAYGHVID-EEN-------PDFVVL-GFDKTLTYERLKKACILL-RKGKFY-IATHPD 161 (271)
T ss_dssp CS-----CEEEEESCHHHHHHHHHTTCEEC-SSS-------CSEEEE-CCCTTCCHHHHHHHHHHH-TTTCEE-EESCCC
T ss_pred CC-----CeEEEEcCHHHHHHHHHcCCccC-CCC-------CCEEEE-eCCCCcCHHHHHHHHHHH-HCCCeE-EEECCC
Confidence 00 001100000 0111000 000 000111 112345789999999999 889998 888775
Q ss_pred chHHHHH---HHhhcCCccccccc---ee---ecCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEEC
Q psy8912 450 EMLRAHQ---LVDLFNWNQHFDHK---EI---FPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 450 ~~~~a~~---~L~~lgL~~yFd~~---~i---~~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V~ 519 (538)
.. .... .++..++..+|+.. +. ...+|+..|..+++++|++|++|++|||+ .+|+++|+++|+.++.|.
T Consensus 162 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~ 240 (271)
T 1vjr_A 162 IN-CPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVL 240 (271)
T ss_dssp SE-ECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEES
T ss_pred cc-ccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 43 1111 34445566777622 11 22367888999999999999999999999 599999999999999999
Q ss_pred CCCCHH
Q psy8912 520 DGMSHS 525 (538)
Q Consensus 520 dg~t~~ 525 (538)
+|.+..
T Consensus 241 ~g~~~~ 246 (271)
T 1vjr_A 241 TGETTP 246 (271)
T ss_dssp SSSCCH
T ss_pred CCCCCH
Confidence 997653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=115.60 Aligned_cols=104 Identities=14% Similarity=0.101 Sum_probs=86.7
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDD 132 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGD 132 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+|+.+ .+..| ..++++++.. ++|+||||
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~i--~~~~K----~~~~~~l~~~-~~~~~vGD 232 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIAEV--LPHQK----SEEVKKLQAK-EVVAFVGD 232 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECSC--CTTCH----HHHHHHHTTT-CCEEEEEC
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCceeeeec--ChHHH----HHHHHHHhcC-CeEEEEEC
Confidence 467999999999999999999999999988 8899999999999999874 33333 7788999999 99999999
Q ss_pred CcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEE
Q psy8912 133 EERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIY 172 (538)
Q Consensus 133 s~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii 172 (538)
+.+|+.+|+++|+. +.+..+. . .....+|+++
T Consensus 233 s~~Di~~a~~ag~~-v~~~~~~--~-----~~~~~ad~v~ 264 (287)
T 3a1c_A 233 GINDAPALAQADLG-IAVGSGS--D-----VAVESGDIVL 264 (287)
T ss_dssp TTTCHHHHHHSSEE-EEECCCS--C-----CSSCCSSEEE
T ss_pred CHHHHHHHHHCCee-EEeCCCC--H-----HHHhhCCEEE
Confidence 99999999999997 5554322 1 1234688888
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.8e-11 Score=114.96 Aligned_cols=203 Identities=14% Similarity=0.174 Sum_probs=126.0
Q ss_pred ccccccccccccc-------cccchHHHHHHhhhcCcceeeecccc--ccchhhhHHhhhCCCcccccccccCcchhhhh
Q psy8912 301 KDRVEDAKGTLLN-------LYRDIPEIVKYLKDHNIKLALASRTV--HIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKH 371 (538)
Q Consensus 301 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (538)
|--+-|-+|||.+ ..+.....++.|+++|++..+++... +.......+..+|+.. ...++.....-..+
T Consensus 13 k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~ 90 (271)
T 2x4d_A 13 RGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI--SEQEVTAPAPAACQ 90 (271)
T ss_dssp CEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC--CGGGEECHHHHHHH
T ss_pred CEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC--CHHHeecHHHHHHH
Confidence 3457899999999 88888888999999999999998321 2334455666777752 12344443212222
Q ss_pred hhhcccCcCCCccceEEeecC--CCCcCCCC--CCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHC-CceEEEEe
Q psy8912 372 FANLKKDSKIKYKDMVFFDDE--ERNARSIS--KLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQN-NCLVAAAS 446 (538)
Q Consensus 372 ~~~~~~~~~~~~~~l~~~Dld--h~~~s~~~--p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~-GiklaIAS 446 (538)
+. ... .. + ..++..+ ..-+..+. ..... +. ........++++.++|+.|+++ |+++ ++|
T Consensus 91 ~~--~~~-~~-~--~~~~~~~~~~~~l~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~l~~l~~~~~~~~-i~~ 154 (271)
T 2x4d_A 91 IL--KER-GL-R--PYLLIHDGVRSEFDQIDTSNPNCV--------VI-ADAGESFSYQNMNNAFQVLMELEKPVL-ISL 154 (271)
T ss_dssp HH--HHH-TC-C--EEEECCGGGGGGGTTSCCSSCSEE--------EE-CCCGGGCCHHHHHHHHHHHHHCSSCCE-EEE
T ss_pred HH--HHc-CC-E--EEEEeCHHHHHHHHHcCCCCCCEE--------EE-ecCCCCcCHHHHHHHHHHHHhcCCCeE-EEE
Confidence 11 111 00 0 1111111 00000000 00100 00 0111223477899999999998 9999 777
Q ss_pred CCCchHHHHHHHhhcCCcccccc------ce--eecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEE
Q psy8912 447 RTTEMLRAHQLVDLFNWNQHFDH------KE--IFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIH 517 (538)
Q Consensus 447 ss~~~~~a~~~L~~lgL~~yFd~------~~--i~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~ 517 (538)
++... .....+..+++..+|+. .+ ....+|+..|..+++++|++|++|++|||+. +|+.+|+++|+.+++
T Consensus 155 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~ 233 (271)
T 2x4d_A 155 GKGRY-YAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQ 233 (271)
T ss_dssp CCCSE-EEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred cCCcc-cccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEE
Confidence 66533 22223444555555541 11 1234778889999999999999999999998 999999999999999
Q ss_pred ECCCC
Q psy8912 518 VKDGM 522 (538)
Q Consensus 518 V~dg~ 522 (538)
|.+|.
T Consensus 234 v~~g~ 238 (271)
T 2x4d_A 234 VRTGK 238 (271)
T ss_dssp ESSTT
T ss_pred EcCCC
Confidence 99984
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=5.6e-11 Score=112.71 Aligned_cols=85 Identities=15% Similarity=0.264 Sum_probs=76.5
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
.|++|+++|++++|+|+++.. .++..++.+|+..+|+.. .+|+..+.++++++|++|++|++|||+.+|+.++++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~-~~~~~l~~lgl~~~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 128 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNA-VVDHRMEQLGITHYYKGQ----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQ 128 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSH-HHHHHHHHHTCCEEECSC----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChH-HHHHHHHHcCCccceeCC----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 599999999999999998765 889999999999999842 678999999999999999999999999999999999
Q ss_pred cCCEEEEECCC
Q psy8912 511 LGVTCIHVKDG 521 (538)
Q Consensus 511 aGi~~i~V~dg 521 (538)
+|+.+ ++.++
T Consensus 129 ag~~~-~~~~~ 138 (191)
T 3n1u_A 129 VGLGV-AVSNA 138 (191)
T ss_dssp SSEEE-ECTTC
T ss_pred CCCEE-EeCCc
Confidence 99987 45443
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-10 Score=106.48 Aligned_cols=100 Identities=11% Similarity=-0.049 Sum_probs=68.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCC---CcH-HHHHHHHHH-cCCCCCCcceeecCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRT---SEI-LHAKQILNL-INLNQYFSNKEIYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~---~~p-~~~~~~L~~-lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++ ++++|+||+ +.. ......+.. ++...+|+.+ .++.+. .+ +
T Consensus 65 ~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i--~~~~~~--------~l----~ 129 (180)
T 3bwv_A 65 FRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFV--FCGRKN--------II----L 129 (180)
T ss_dssp GGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEE--ECSCGG--------GB----C
T ss_pred hccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEE--EeCCcC--------ee----c
Confidence 34578999999999999985 999999998 330 122344544 5666666653 333331 12 7
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|++|||+..|+. +++| .++++.++.... ..++.++.+..
T Consensus 130 ~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~--------~~~~~~i~~~~ 169 (180)
T 3bwv_A 130 ADYLIDDNPKQLE--IFEG-KSIMFTASHNVY--------EHRFERVSGWR 169 (180)
T ss_dssp CSEEEESCHHHHH--HCSS-EEEEECCGGGTT--------CCSSEEECSHH
T ss_pred ccEEecCCcchHH--HhCC-CeEEeCCCcccC--------CCCceecCCHH
Confidence 7999999999986 4579 999998764311 34677766643
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=109.75 Aligned_cols=82 Identities=10% Similarity=0.133 Sum_probs=75.0
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++|+|+++.. .++..++.+|+..+|+. ..+|+..+.++++++|++|++|+||||+.+|+.+|++
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~-~~~~~l~~lgl~~~~~~----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ 135 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAK-LVEDRCATLGITHLYQG----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEK 135 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCH-HHHHHHHHHTCCEEECS----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTT
T ss_pred HHHHHHHCCCeEEEEeCCChH-HHHHHHHHcCCceeecC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 899999999999999998765 88899999999999883 3678999999999999999999999999999999999
Q ss_pred cCCEEEE
Q psy8912 511 LGVTCIH 517 (538)
Q Consensus 511 aGi~~i~ 517 (538)
+|+.++.
T Consensus 136 ag~~~~~ 142 (188)
T 2r8e_A 136 VGLSVAV 142 (188)
T ss_dssp SSEEEEC
T ss_pred CCCEEEe
Confidence 9998853
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=7.1e-11 Score=109.79 Aligned_cols=95 Identities=18% Similarity=0.238 Sum_probs=79.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---------------cCCchHHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------PGQKTTHFANLK 485 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------------~~~k~~~~~kal 485 (538)
+..++||+.++|++|+++|++++++|++... .++..++.+++..+|+..... ..+|+..+.+++
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 152 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFDI-AVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 152 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHH-HHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcHH-HHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence 3568899999999999999999999987643 677889999998888632111 125677899999
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+++|++|++|++|||+.+|+++|++||+.++
T Consensus 153 ~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~ 183 (211)
T 1l7m_A 153 KIEGINLEDTVAVGDGANDISMFKKAGLKIA 183 (211)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred HHcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence 9999999999999999999999999999753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=5.8e-10 Score=109.38 Aligned_cols=74 Identities=12% Similarity=0.184 Sum_probs=55.8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
.+|+.....+++++|++|++|++|||+.+|+.+++.+|+. +.+.+ ...+.. . .+|+|+.+ ..+.+...+.+
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~n--a~~~~k-~----~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGN--ASEKVQ-S----VADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT--SCHHHH-H----TCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCC--CcHHHH-H----hcCEeeCCCCcCHHHHHHHH
Confidence 3577899999999999999999999999999999999965 44443 333332 2 36788765 56666677776
Q ss_pred cCC
Q psy8912 186 LGV 188 (538)
Q Consensus 186 ~g~ 188 (538)
.|+
T Consensus 265 ~~~ 267 (268)
T 3r4c_A 265 FGV 267 (268)
T ss_dssp TTC
T ss_pred hCC
Confidence 653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.3e-11 Score=117.23 Aligned_cols=121 Identities=12% Similarity=0.142 Sum_probs=87.2
Q ss_pred cCCCHHHHHHHhhhC-CceEEEEcCC---------------------CcHHHHHHHHHHcCCCCCCcce-----------
Q psy8912 56 YYRGVPEILRYLKEN-KCLVAAASRT---------------------SEILHAKQILNLINLNQYFSNK----------- 102 (538)
Q Consensus 56 l~pgv~elL~~Lk~~-GikiaIvTn~---------------------~~p~~~~~~L~~lgL~~~Fd~i----------- 102 (538)
+++++.++++.|+++ |+++++.|+. .. ..+...++.+|+..+|...
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNL-LAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHH-HHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHH-HHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 457899999999988 9999999977 34 5667788888887666431
Q ss_pred --eec--CCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc-h
Q psy8912 103 --EIY--PGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE-Q 177 (538)
Q Consensus 103 --e~~--~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~-~ 177 (538)
+.. ..+|+..+..+++++|++|++|++|||+.+|+.+++.+|+. +.+.+ ....... .+++++.+.. .
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~--~~~~~~~-----~a~~v~~~~~~~ 273 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKN--ATQEAKN-----LHNLITDSEYSK 273 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE-EECTT--CCHHHHH-----HCCCBCSSCHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE-EEECC--ccHHHHH-----hCCEEcCCCCcC
Confidence 233 34578999999999999999999999999999999999954 33433 3333322 2466665533 3
Q ss_pred hhHHhhhh
Q psy8912 178 EHVNDISK 185 (538)
Q Consensus 178 ~~~~~i~~ 185 (538)
.+...+.+
T Consensus 274 gv~~~~~~ 281 (289)
T 3gyg_A 274 GITNTLKK 281 (289)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.7e-10 Score=110.40 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch-hhHHhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ-EHVNDIS 184 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~-~~~~~i~ 184 (538)
+|+..+..+++++|++|++|++|||+.+|+.+++.+|+. +.+.++. .. .+ ..+++++.+..+ .....+.
T Consensus 153 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~~--~~-~~----~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 153 NKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQAP--KI-LK----ENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp CHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HH-HH----TTCSEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCCC--HH-HH----hhCCEEecCCCcchHHHHHH
Confidence 567889999999999999999999999999999999997 5565542 22 22 257888766433 3444343
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-10 Score=107.55 Aligned_cols=82 Identities=15% Similarity=0.213 Sum_probs=71.5
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHh--hcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhH
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVD--LFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDV 508 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~--~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aA 508 (538)
.|++|+++|++++|+|++ + .++.+++ .+|+. ||. ...+|+..+.++++++|++|++|+||||+.+|+.++
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~-~~~~~l~~l~lgi~-~~~----g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~ 115 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--A-CSKQTLSALKLDCK-TEV----SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECL 115 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--C-CCHHHHHTTCCCCC-EEC----SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHHCCCEEEEEeCc--H-HHHHHHHHhCCCcE-EEE----CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHH
Confidence 699999999999999988 3 6788899 77886 765 235789999999999999999999999999999999
Q ss_pred cccCCEEEEECCC
Q psy8912 509 SPLGVTCIHVKDG 521 (538)
Q Consensus 509 k~aGi~~i~V~dg 521 (538)
+++|+.+ ++.++
T Consensus 116 ~~ag~~~-a~~na 127 (168)
T 3ewi_A 116 KRVGLSA-VPADA 127 (168)
T ss_dssp HHSSEEE-ECTTC
T ss_pred HHCCCEE-EeCCh
Confidence 9999885 56664
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.10 E-value=2e-10 Score=115.20 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=79.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
...++||+.++|++|+++|++++|+|+++. ..++.+++.+|+.+||+. +.+..| ..++++++.. ++|++|||
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~--i~~~~K----~~~~~~l~~~-~~~~~vGD 232 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIAE--VLPHQK----SEEVKKLQAK-EVVAFVGD 232 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECS--CCTTCH----HHHHHHHTTT-CCEEEEEC
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCceeeee--cChHHH----HHHHHHHhcC-CeEEEEEC
Confidence 367999999999999999999999999875 478899999999999993 444333 7788999999 99999999
Q ss_pred ccccHHhHcccCCEEEEECC
Q psy8912 501 EERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 501 s~~~I~aAk~aGi~~i~V~d 520 (538)
+.+|+.+|+++|+. +++.+
T Consensus 233 s~~Di~~a~~ag~~-v~~~~ 251 (287)
T 3a1c_A 233 GINDAPALAQADLG-IAVGS 251 (287)
T ss_dssp TTTCHHHHHHSSEE-EEECC
T ss_pred CHHHHHHHHHCCee-EEeCC
Confidence 99999999999997 56654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-10 Score=108.24 Aligned_cols=99 Identities=16% Similarity=0.151 Sum_probs=85.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-cccee-----ec--CCchHHHHHHHHHhCCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEI-----FP--GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~~i-----~~--~~k~~~~~kal~~lgi~p 492 (538)
...++||+.++|+.|+. +++++|++.. ..++..++.+|+..|| +.... .. .+|+..|.++++++|++|
T Consensus 85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~ 160 (229)
T 2fdr_A 85 DVKIIDGVKFALSRLTT---PRCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP 160 (229)
T ss_dssp HCCBCTTHHHHHHHCCS---CEEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred CCccCcCHHHHHHHhCC---CEEEEECCCh-hHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCCh
Confidence 46789999999999875 9999998864 4778899999999999 73222 12 346777999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.++++.++..
T Consensus 161 ~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~ 191 (229)
T 2fdr_A 161 DRVVVVEDSVHGIHGARAAGMRVIGFTGASH 191 (229)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred hHeEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence 9999999999999999999999999999865
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.5e-11 Score=116.36 Aligned_cols=129 Identities=14% Similarity=0.079 Sum_probs=95.0
Q ss_pred CceEEEeCCCCCChhhHhhhh-chhHHHHHHHHh-hhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMD-AKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~-~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
.+++++|+|+||+........ +.+.-. -.+-. .....+.++||+.++|++|++. +.++|+||+.. .+++.+++.+
T Consensus 15 k~~LVLDLD~TLvhs~~~~~~~~d~~~~-~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~-~~a~~vl~~l 91 (181)
T 2ght_A 15 KICVVINLDETLVHSSFKPVNNADFIIP-VEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYADPVADLL 91 (181)
T ss_dssp SCEEEECCBTTTEEEESSCCSSCSEEEE-EEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHHH
T ss_pred CeEEEECCCCCeECCcccCCCCccceee-eeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCH-HHHHHHHHHH
Confidence 479999999999653211100 000000 00000 0122467899999999999998 99999999998 9999999999
Q ss_pred CCCCCCcceeecCC--CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 94 NLNQYFSNKEIYPG--QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 94 gL~~~Fd~ie~~~~--~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
+...+|+.+..... ...+.|.+.++++|.+|++|++|||+..++.++.++|+.+
T Consensus 92 d~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 92 DKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp CTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred CCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 99999987521111 1225688889999999999999999999999999999984
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.07 E-value=6.1e-10 Score=108.25 Aligned_cols=140 Identities=13% Similarity=0.067 Sum_probs=103.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
|+|+|+||+||||.+. ...+-|.+.++|++|+++|++++++|+++. ..+...++.++
T Consensus 4 m~kli~~DlDGTLl~~----------------------~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~-~~~~~~~~~l~ 60 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTDR----------------------DRLISTKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIFLG 60 (227)
T ss_dssp CCCEEEEEHHHHSBCT----------------------TSCBCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHT
T ss_pred ceEEEEEECCCCCcCC----------------------CCcCCHHHHHHHHHHHHCCCEEEEECCCCc-HHHHHHHHHhC
Confidence 4799999999999862 234567789999999999999999999987 88888888888
Q ss_pred CCCC---------Cc--ce-------------------------------------------------------------
Q psy8912 95 LNQY---------FS--NK------------------------------------------------------------- 102 (538)
Q Consensus 95 L~~~---------Fd--~i------------------------------------------------------------- 102 (538)
+..+ ++ ..
T Consensus 61 ~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (227)
T 1l6r_A 61 INGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFY 140 (227)
T ss_dssp CCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEE
T ss_pred CCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEe
Confidence 7541 11 00
Q ss_pred -----eecC--CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 103 -----EIYP--GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 103 -----e~~~--~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
++.+ .+|+..+..+++++|++++++++|||+.+|+.+++.+|+. +.+.++ ... .+. .+++++.+.
T Consensus 141 ~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~--~~~-~k~----~a~~v~~~~ 212 (227)
T 1l6r_A 141 SGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANA--TDN-IKA----VSDFVSDYS 212 (227)
T ss_dssp ETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTS--CHH-HHH----HCSEECSCC
T ss_pred cCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCc--hHH-HHH----hCCEEecCC
Confidence 1112 3567889999999999999999999999999999999985 556543 232 222 367777553
Q ss_pred -chhhHHhhhh
Q psy8912 176 -EQEHVNDISK 185 (538)
Q Consensus 176 -~~~~~~~i~~ 185 (538)
.+.+...+.+
T Consensus 213 ~~~Gv~~~l~~ 223 (227)
T 1l6r_A 213 YGEEIGQIFKH 223 (227)
T ss_dssp TTHHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 4444444444
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=3.1e-10 Score=112.00 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhhc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISKL 186 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~~ 186 (538)
+|+..++.+++++|++|++|++|||+.+|+.+++.+|+. |..|....+..+. +|+|+.+ ..+.+...+.+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k~~-----A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLG---VAMGNAIDEVKEA-----AQAVTLTNAENGVAAAIRKY 268 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEE---CBC---CCHHHHH-----CSCBC------CHHHHHC--
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCce---eeccCCCHHHHHh-----cceeccCCCccHHHHHHHHH
Confidence 477889999999999999999999999999999999964 4444444443332 4555443 455555555543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=4.7e-10 Score=116.93 Aligned_cols=53 Identities=8% Similarity=-0.071 Sum_probs=41.8
Q ss_pred CCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 123 EYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 123 ~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++++|+||||+. .||.+|+++||.+++|.+|...... ......||+++.+..+
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~--~~~~~~pd~vi~~l~e 342 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGD--DLKECKPTLIVNDVFD 342 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTC--CCTTCCCSEECSSHHH
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCccc--ccccCCCCEEECCHHH
Confidence 679999999998 5999999999999999998765443 1224578888766443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.5e-09 Score=107.73 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
+|+..+..+++++|++|++|++|||+.+|+.+++.+|+. +.+.+ ...+..+ .+|+|+.+ ..+.+...+.+
T Consensus 202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam~n--a~~~~k~-----~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLG-VAMGN--AVPEIKR-----KADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT--SCHHHHH-----HSSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCE-EEecC--CcHHHHH-----hcCEECCCCCccHHHHHHHH
Confidence 577889999999999999999999999999999999974 44433 3333322 35777755 45555555555
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.04 E-value=3.6e-11 Score=115.98 Aligned_cols=93 Identities=11% Similarity=0.202 Sum_probs=75.6
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccce------eecCCc--hHHHHHHHHHhCCCCCcE
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE------IFPGQK--TTHFANLKKATGIEYKDM 495 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~------i~~~~k--~~~~~kal~~lgi~pee~ 495 (538)
++||+.++|++|+++|++++|+|+++.. .++..++. |.+||+... ...+.| ++.|.++++++|+ |
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~-~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~ 161 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT-KTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R 161 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC-SSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH-HHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence 5789999999999999999999998754 44555665 567777431 122334 5569999999998 9
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+||||+..|+++|+++|+.+|+|.+|..
T Consensus 162 l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 162 IFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred EEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 9999999999999999999999999864
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-10 Score=122.02 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccce-ee--------------cCCchHHHHHH
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-IF--------------PGQKTTHFANL 484 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~-i~--------------~~~k~~~~~ka 484 (538)
..+.++||+.++|++|+++|++++|+|++... .++.+++.+|+..+|.... +. ..+|++.|.++
T Consensus 253 ~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~-~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~ 331 (415)
T 3p96_A 253 GQLELMPGARTTLRTLRRLGYACGVVSGGFRR-IIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF 331 (415)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHH-HHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HhCccCccHHHHHHHHHHCCCEEEEEcCCcHH-HHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence 45689999999999999999999999988754 8899999999998886211 00 12467779999
Q ss_pred HHHhCCCCCcEEEEecccccHHhHcccCCEEEE
Q psy8912 485 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 485 l~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
++++|++|++|++|||+.+|+.+|+++|+.++.
T Consensus 332 ~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 332 AQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 999999999999999999999999999998765
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.7e-10 Score=111.49 Aligned_cols=92 Identities=5% Similarity=0.019 Sum_probs=74.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee---ecC--------CchHH---HH----
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---FPG--------QKTTH---FA---- 482 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i---~~~--------~k~~~---~~---- 482 (538)
.+.++||+.++|++|+++|++++|+|+++. ..++.+|+ ||.+| +.+.. ... .|+.. +.
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 478999999999999999999999999875 47788888 77665 52211 111 33332 33
Q ss_pred ---HHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 483 ---NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 483 ---kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
++++++|++|++|+||||+.+|+.+|+++|+.++
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence 8899999999999999999999999999999986
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.4e-10 Score=121.42 Aligned_cols=92 Identities=13% Similarity=0.189 Sum_probs=75.9
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCC--------ch---HHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHH
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTT--------EM---LRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKA 487 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~--------~~---~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~ 487 (538)
++||+.++|++|+++|++++|+|+++ .. ..+..+|+.+|+. |+...... .+.++.|+.++++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~ 165 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQ 165 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHH
Confidence 89999999999999999999999854 11 2377889999984 87422211 1346779999999
Q ss_pred hC----CCCCcEEEEeccc-----------------ccHHhHcccCCEEEE
Q psy8912 488 TG----IEYKDMVFFDDEE-----------------RNSHDVSPLGVTCIH 517 (538)
Q Consensus 488 lg----i~pee~l~~eDs~-----------------~~I~aAk~aGi~~i~ 517 (538)
+| ++|++|+||||+. .|+.+|+++|+.++.
T Consensus 166 l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 166 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp SSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred hCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 97 9999999999997 799999999999874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-10 Score=115.94 Aligned_cols=121 Identities=18% Similarity=0.158 Sum_probs=84.0
Q ss_pred CCceEEEeCCCCCChhh--Hhhhh---chhH-HHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc---HHH
Q psy8912 15 FPKMVVFDLDYTLWPLH--VHDLV---APFK-KIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILH 85 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~--~~~~i---~~~~-~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~---p~~ 85 (538)
.+++||||+||||.+.. ..... .++. ..+...+.. ....++||+.++|+.|+++|++++++||++. ...
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~--~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDA--RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHH--TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHH
T ss_pred CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHc--CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHH
Confidence 35799999999995433 11111 2332 223333332 4678999999999999999999999999854 158
Q ss_pred HHHHHHHcCCCCCCc-cee--ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q psy8912 86 AKQILNLINLNQYFS-NKE--IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 140 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd-~ie--~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aA 140 (538)
+...|+.+|+..+++ .+. .....|+..+..+.+. |. ..+++|||...|+.++
T Consensus 135 T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy--~iv~~vGD~~~Dl~~~ 189 (262)
T 3ocu_A 135 TIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GY--EIVLYVGDNLDDFGNT 189 (262)
T ss_dssp HHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TE--EEEEEEESSGGGGCST
T ss_pred HHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhc-CC--CEEEEECCChHHhccc
Confidence 888999999987663 221 1133466767776665 32 2399999999999883
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-09 Score=107.38 Aligned_cols=70 Identities=13% Similarity=0.082 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
+|+..++.+++++|++|++|++|||+.+|+.+++.+|+. +.+ |....+..+ .+++|+.+ ..+.+...+.+
T Consensus 228 ~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~-vam--~na~~~~k~-----~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 228 HKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYS-YAM--ANAPKNVKA-----AANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEE-EEC--TTSCHHHHH-----HCSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCe-EEc--CCcCHHHHH-----hccEEcCCCCcchHHHHHHH
Confidence 577899999999999999999999999999999999964 334 444444332 35777765 34444444443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4.8e-10 Score=111.90 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=79.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc--hHHHHHHHhhcCCc--cccccceeecC-CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE--MLRAHQLVDLFNWN--QHFDHKEIFPG-QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~--~~~a~~~L~~lgL~--~yFd~~~i~~~-~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++|++++|+|+++. ...+...|+.+|+. .+|+.....+. .|+.....+ ...+. +.|
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~~~~-~~~~~--~~~ 175 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKEKGKEKRREL-VSQTH--DIV 175 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTCCSSHHHHHH-HHHHE--EEE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCCCCcHHHHHH-HHhCC--Cce
Confidence 367999999999999999999999998762 22566788999998 77873222221 244444333 33443 459
Q ss_pred EEEecccccHHhHc-------c---------cCCEEEEECCCCCHHHHHHHH
Q psy8912 496 VFFDDEERNSHDVS-------P---------LGVTCIHVKDGMSHSVLHKGL 531 (538)
Q Consensus 496 l~~eDs~~~I~aAk-------~---------aGi~~i~V~dg~t~~~~~~~l 531 (538)
++|||+.+|+.+|+ + +|+.++.+|++ .-+.|+.++
T Consensus 176 l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~-~y~~w~~~~ 226 (258)
T 2i33_A 176 LFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNP-MYGDWEGAL 226 (258)
T ss_dssp EEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCC-SSSHHHHHH
T ss_pred EEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCC-Ccchhhhhh
Confidence 99999999999994 3 89999999998 445566666
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=8.6e-10 Score=102.56 Aligned_cols=100 Identities=12% Similarity=0.115 Sum_probs=76.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc--cccccceee---------cCCc---hHHHHHHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHKEIF---------PGQK---TTHFANLKKA 487 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~--~yFd~~~i~---------~~~k---~~~~~kal~~ 487 (538)
..++||+.++|++|+++|++++++|++.. ..++..++.+|+. .+|....+. ...+ ...+..+.+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLS-ESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 45899999999999999999999998865 4888999999994 466521111 1122 2224444455
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|++|++|||+.+|++++ ++|+.+++|.++..
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~ 194 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEH 194 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSS
T ss_pred hCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCc
Confidence 699999999999999999999 68998877776543
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-10 Score=116.17 Aligned_cols=92 Identities=12% Similarity=0.107 Sum_probs=79.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
....++||+.++|++|+++|++++++|+++.. .++.+++++||.+||+. +. ++.+..++++++.+|++|+|||
T Consensus 133 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~-~~~~~~~~~gl~~~f~~--~~----p~~k~~~~~~l~~~~~~~~~VG 205 (263)
T 2yj3_A 133 ISDVPRPNLKDYLEKLKNEGLKIIILSGDKED-KVKELSKELNIQEYYSN--LS----PEDKVRIIEKLKQNGNKVLMIG 205 (263)
Confidence 34679999999999999999999999998754 88999999999999993 33 3456788899999999999999
Q ss_pred cccccHHhHcccCCEEEEECCC
Q psy8912 500 DEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 500 Ds~~~I~aAk~aGi~~i~V~dg 521 (538)
|+.+|+.+++++|+ +|.||
T Consensus 206 D~~~D~~aa~~Agv---~va~g 224 (263)
T 2yj3_A 206 DGVNDAAALALADV---SVAMG 224 (263)
Confidence 99999999999995 44555
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.90 E-value=5.8e-10 Score=111.55 Aligned_cols=118 Identities=19% Similarity=0.174 Sum_probs=81.3
Q ss_pred ceEEEeCCCCCChhhHh--hhh---chhH-HHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH---HHHH
Q psy8912 17 KMVVFDLDYTLWPLHVH--DLV---APFK-KIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---LHAK 87 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~--~~i---~~~~-~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---~~~~ 87 (538)
++||||+||||.+.... ... .++. ..+..... .....++||+.++|+.|+++|++++++||++.. ..+.
T Consensus 59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~ 136 (260)
T 3pct_A 59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVD--ARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTV 136 (260)
T ss_dssp EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--TTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHH
T ss_pred CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHH--cCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHH
Confidence 59999999999553311 111 2232 22333333 345789999999999999999999999998641 5888
Q ss_pred HHHHHcCCCCCCc-ceee--cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q psy8912 88 QILNLINLNQYFS-NKEI--YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHD 139 (538)
Q Consensus 88 ~~L~~lgL~~~Fd-~ie~--~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~a 139 (538)
..|+.+|+..+++ .+-. ....|...+..+.+ .|. .-+++|||...|+.+
T Consensus 137 ~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~-~gy--~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 137 DDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVED-MGY--DIVLFVGDNLNDFGD 188 (260)
T ss_dssp HHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHT-TTC--EEEEEEESSGGGGCG
T ss_pred HHHHHcCcCccccceeEecCCCCChHHHHHHHHh-cCC--CEEEEECCChHHcCc
Confidence 8999999987774 2211 12335555555544 333 449999999999988
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.89 E-value=9.9e-09 Score=102.17 Aligned_cols=69 Identities=10% Similarity=0.001 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
+|+..++.+++++|++++++++|||+.+|+.+++.+|+ ++.+.++. .+..+ .+++|+.+ ..+.+...+.
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~-~vam~na~--~~~k~-----~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGI-SYAVSNAR--QEVIA-----AAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEEETTSC--HHHHH-----HSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCC-EEEcCCCC--HHHHH-----hcCeECCCCCCChHHHHHH
Confidence 46788999999999999999999999999999999996 45565543 33222 36788765 3444444443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-08 Score=98.83 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhhc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISKL 186 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~~ 186 (538)
+|...++.+++++|+++++|++|||+.+|+.+++.+|+.++ +.+ ...+ .+. .+++|+.+ ..+.+...+.+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va-m~n--a~~~-~k~----~A~~v~~~~~~dGva~~i~~~ 254 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA-MGN--AHEE-VKR----VADFVTKPVDKEGIWYGLKQL 254 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE-ETT--CCHH-HHH----TCSEEECCGGGTHHHHHHHHT
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE-eCC--CcHH-HHH----hCCEEeCCCCcchHHHHHHHh
Confidence 45667899999999999999999999999999999999544 543 3333 222 36788765 455555556554
Q ss_pred C
Q psy8912 187 G 187 (538)
Q Consensus 187 g 187 (538)
+
T Consensus 255 ~ 255 (258)
T 2pq0_A 255 Q 255 (258)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=101.86 Aligned_cols=71 Identities=18% Similarity=0.172 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEe-CCchhhHHhhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYF-DDEQEHVNDISK 185 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~-d~~~~~~~~i~~ 185 (538)
|+...+.+++++|++++++++|||+.+|+.+++.+|+. +.+ |....+..+... ...++. +..+.+...+.+
T Consensus 210 K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~-vAm--~Na~~~vk~~A~---~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 210 KGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKG-CIM--ANAHQRLKDLHP---ELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EEC--TTSCHHHHHHCT---TSEECCCGGGTHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCE-EEc--cCCCHHHHHhCC---CCEecccCCcchHHHHHHH
Confidence 55668889999999999999999999999999999954 334 444444433211 123433 345555555544
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=3e-09 Score=103.87 Aligned_cols=83 Identities=11% Similarity=0.176 Sum_probs=71.5
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEeccc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 502 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~ 502 (538)
.++||+.++|++|+++|++++++|+++. ..++.+++.+|+.+||+ .+.+.+|........+.+ +|++|||+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~--~~~~~~k~~~~k~~~~~~-----~~~~vGD~~ 215 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNR-FVAKWVAEELGLDDYFA--EVLPHEKAEKVKEVQQKY-----VTAMVGDGV 215 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEEC--SCCGGGHHHHHHHHHTTS-----CEEEEECTT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCChhHhH--hcCHHHHHHHHHHHHhcC-----CEEEEeCCc
Confidence 5899999999999999999999998875 48899999999999999 455667766655555433 899999999
Q ss_pred ccHHhHcccCC
Q psy8912 503 RNSHDVSPLGV 513 (538)
Q Consensus 503 ~~I~aAk~aGi 513 (538)
+|++++++||+
T Consensus 216 nDi~~~~~Ag~ 226 (280)
T 3skx_A 216 NDAPALAQADV 226 (280)
T ss_dssp TTHHHHHHSSE
T ss_pred hhHHHHHhCCc
Confidence 99999999996
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.81 E-value=2.1e-09 Score=98.98 Aligned_cols=99 Identities=9% Similarity=0.005 Sum_probs=76.0
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC----Cc--hHHHHHHHHHhCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG----QK--TTHFANLKKATGIE 491 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~----~k--~~~~~kal~~lgi~ 491 (538)
+...+.++||+.++|++|+++|++++++|++... .++.. +.+|+..||+....... .+ +.....+++++ +
T Consensus 74 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~ 149 (201)
T 4ap9_A 74 TREKVNVSPEARELVETLREKGFKVVLISGSFEE-VLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--R 149 (201)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETT-TSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--T
T ss_pred HHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHH-HHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--C
Confidence 3345789999999999999999999999988754 66777 99999888653222211 11 12245566666 9
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|++|++|||+.+|+++|+++|+. +++.++
T Consensus 150 ~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~ 178 (201)
T 4ap9_A 150 DGFILAMGDGYADAKMFERADMG-IAVGRE 178 (201)
T ss_dssp TSCEEEEECTTCCHHHHHHCSEE-EEESSC
T ss_pred cCcEEEEeCCHHHHHHHHhCCce-EEECCC
Confidence 99999999999999999999997 566554
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.80 E-value=9e-09 Score=102.39 Aligned_cols=186 Identities=11% Similarity=0.126 Sum_probs=119.8
Q ss_pred cccccccccccccc--cccchHHHHH--------HhhhcCcceeeeccccccchhhhHHhhhCCCcccccccccCcchhh
Q psy8912 300 KKDRVEDAKGTLLN--LYRDIPEIVK--------YLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKI 369 (538)
Q Consensus 300 ~~~~~~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (538)
.|--+-|=+|||.+ +.|.....+. .++++|+..+++|-.+ ...+..++..+|+.+.-. .+..+- -+
T Consensus 22 ~kliifDlDGTLlds~i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~-~~~~~~~~~~~g~~~~~~--~~i~~~-g~ 97 (289)
T 3gyg_A 22 QYIVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSS-IESILDKMGRGKFRYFPH--FIASDL-GT 97 (289)
T ss_dssp SEEEEEETBTTTBCSSCCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHHHHHHHHHTTCCBCCS--EEEETT-TT
T ss_pred CeEEEEECCCCCcCCCCCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCC-HHHHHHHHHhhccCCCCC--eEeecC-Cc
Confidence 34568899999998 2344444454 4578999999998433 345677777777754211 011000 00
Q ss_pred hhhhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHC-CceEEEEeCC
Q psy8912 370 KHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQN-NCLVAAASRT 448 (538)
Q Consensus 370 ~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~-GiklaIASss 448 (538)
.+... ..|...+. . ........ .. ..++++.++|+.|+++ |++++++|++
T Consensus 98 ---------------~i~~~---~~ng~~~~--~-----~~~~~~~~---~~-~~~~~v~e~l~~l~~~~g~~l~~~t~~ 148 (289)
T 3gyg_A 98 ---------------EITYF---SEHNFGQQ--D-----NKWNSRIN---EG-FSKEKVEKLVKQLHENHNILLNPQTQL 148 (289)
T ss_dssp ---------------EEEEC---CSSSTTEE--C-----HHHHHHHH---TT-CCHHHHHHHHHHHHHHSSCCCEEGGGT
T ss_pred ---------------eEEEE---cCCCcEee--c-----Cchhhhhc---cc-CCHHHHHHHHHHHHhhhCceeeecccc
Confidence 00000 00110000 0 00011111 12 4678999999999998 9999999977
Q ss_pred ---------------------CchHHHHHHHhhcCCccccccc-------------eeecC--CchHHHHHHHHHhCCCC
Q psy8912 449 ---------------------TEMLRAHQLVDLFNWNQHFDHK-------------EIFPG--QKTTHFANLKKATGIEY 492 (538)
Q Consensus 449 ---------------------~~~~~a~~~L~~lgL~~yFd~~-------------~i~~~--~k~~~~~kal~~lgi~p 492 (538)
.. ..+..+|+.+|+..+|... ++.+. +|+..+.++++++|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 227 (289)
T 3gyg_A 149 GKSRYKHNFYYQEQDEINDKKNL-LAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNT 227 (289)
T ss_dssp CGGGTTCCEEEECCCHHHHHHHH-HHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCG
T ss_pred cccceEEEEEEeccccccchHHH-HHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCCh
Confidence 33 3567889999998888532 22222 67888999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++|++|||+.+|+.+++.+|+. +++.+
T Consensus 228 ~~~~~~GDs~~D~~~~~~ag~~-~~~~~ 254 (289)
T 3gyg_A 228 ERAIAFGDSGNDVRMLQTVGNG-YLLKN 254 (289)
T ss_dssp GGEEEEECSGGGHHHHTTSSEE-EECTT
T ss_pred hhEEEEcCCHHHHHHHHhCCcE-EEECC
Confidence 9999999999999999999954 44544
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.77 E-value=6e-09 Score=102.46 Aligned_cols=207 Identities=12% Similarity=0.085 Sum_probs=120.1
Q ss_pred cccccccccccc---cccchHHHHHHhhhcCcceeeecc--ccccchhhhHHhhhCCCcccccccccCcchhhhhhhhcc
Q psy8912 302 DRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASR--TVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLK 376 (538)
Q Consensus 302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (538)
-=+-|-.|||.+ ..|.+.+.++.|+++|++.+++|- ..+.......+..+|+... ..+++.+..-..++..
T Consensus 7 li~~DlDGTLl~~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~--~~~ii~~~~~~~~~l~-- 82 (264)
T 3epr_A 7 GYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP--LETIYTATMATVDYMN-- 82 (264)
T ss_dssp EEEECCBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC--GGGEEEHHHHHHHHHH--
T ss_pred EEEEeCCCceEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC--hhheecHHHHHHHHHH--
Confidence 346789999987 448899999999999999999993 2234456677888888642 2455555322222211
Q ss_pred cCcCCCccceEEeecC-------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 377 KDSKIKYKDMVFFDDE-------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
+. .. ...+.+.-.+ ..++.-. .. ....+...+ .....++++.+.+..+ ++|.++ ++|+.+
T Consensus 83 ~~-~~-~~~~~~~~~~~l~~~l~~~g~~~~-~~-------~~~~v~~~~-~~~~~~~~~~~~~~~l-~~~~~~-i~~n~~ 149 (264)
T 3epr_A 83 DM-NR-GKTAYVIGEEGLKKAIADAGYVED-TK-------NPAYVVVGL-DWNVTYDKLATATLAI-QNGALF-IGTNPD 149 (264)
T ss_dssp HH-TC-CSEEEEESCHHHHHHHHHTTCEEC-SS-------SCSEEEECC-CTTCCHHHHHHHHHHH-HTTCEE-EESCCC
T ss_pred Hh-CC-CCeEEEECCHHHHHHHHHcCCccc-CC-------cCCEEEEeC-CCCCCHHHHHHHHHHH-HCCCeE-EEEcCC
Confidence 10 01 1111111111 0111000 00 000001011 1123467788888887 566655 666554
Q ss_pred chHHH--HHHHhhcCCccccccc---ee--ecCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEECCC
Q psy8912 450 EMLRA--HQLVDLFNWNQHFDHK---EI--FPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 450 ~~~~a--~~~L~~lgL~~yFd~~---~i--~~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V~dg 521 (538)
..... ...+...++..+|+.. +. ...+++..|..+++++|++|++|++|||+ .+|+..|+++|+.+++|.+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g 229 (264)
T 3epr_A 150 LNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTG 229 (264)
T ss_dssp SEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred ccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCC
Confidence 21000 0011112233455421 12 22355666999999999999999999999 79999999999999999998
Q ss_pred CCHH
Q psy8912 522 MSHS 525 (538)
Q Consensus 522 ~t~~ 525 (538)
....
T Consensus 230 ~~~~ 233 (264)
T 3epr_A 230 FTTV 233 (264)
T ss_dssp SSCG
T ss_pred CCCh
Confidence 7544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.68 E-value=9.8e-09 Score=100.59 Aligned_cols=204 Identities=11% Similarity=0.095 Sum_probs=119.0
Q ss_pred cccccccccccc---cccchHHHHHHhhhcCcceeeecc-cc-ccchhhhHHhhhCCCcccccccccCcchhhhhhhhcc
Q psy8912 302 DRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASR-TV-HIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLK 376 (538)
Q Consensus 302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (538)
--+-|-.|||.+ +.|.+.+.++.|+++||+.++||= |+ ++......+..+|+.. ...+++.+..-..++ +.
T Consensus 8 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~--~~~~ii~~~~~~~~~--~~ 83 (266)
T 3pdw_A 8 GYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA--TEEQVFTTSMATAQH--IA 83 (266)
T ss_dssp EEEEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC--CGGGEEEHHHHHHHH--HH
T ss_pred EEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC--CHHHccCHHHHHHHH--HH
Confidence 346789999987 678889999999999999999953 32 2345567788888853 224555442111111 11
Q ss_pred cCcCCCccceEEeecC-------CCCcCCC--CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeC
Q psy8912 377 KDSKIKYKDMVFFDDE-------ERNARSI--SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASR 447 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-------h~~~s~~--~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASs 447 (538)
+. .....+.+...+ ..++... .+-.+ .-.+ .....++++.+.+..++. |. ..++|+
T Consensus 84 ~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~l~~-~~-~~i~~n 148 (266)
T 3pdw_A 84 QQ--KKDASVYVIGEEGIRQAIEENGLTFGGENADFV----------VVGI-DRSITYEKFAVGCLAIRN-GA-RFISTN 148 (266)
T ss_dssp HH--CTTCEEEEESCHHHHHHHHHTTCEECCTTCSEE----------EECC-CTTCCHHHHHHHHHHHHT-TC-EEEESC
T ss_pred hh--CCCCEEEEEeChhHHHHHHHcCCccCCCCCCEE----------EEeC-CCCCCHHHHHHHHHHHHC-CC-eEEEEc
Confidence 11 011122222111 1111000 01010 0001 123456788888888865 55 456665
Q ss_pred CCchHHH---HHHHhhcCCcccccc---cee--ecCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEE
Q psy8912 448 TTEMLRA---HQLVDLFNWNQHFDH---KEI--FPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 448 s~~~~~a---~~~L~~lgL~~yFd~---~~i--~~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V 518 (538)
.... .. ...+...++..+|+. .+. ...+++..|..+++++|++|++|++|||+ .+|++.|+++|+.+++|
T Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v 227 (266)
T 3pdw_A 149 GDIA-IPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLV 227 (266)
T ss_dssp CCCE-EEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred CCce-eECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 5432 10 001111223345541 122 22356788999999999999999999999 79999999999999999
Q ss_pred CCCCCHH
Q psy8912 519 KDGMSHS 525 (538)
Q Consensus 519 ~dg~t~~ 525 (538)
.+|.+..
T Consensus 228 ~~g~~~~ 234 (266)
T 3pdw_A 228 HTGVTKR 234 (266)
T ss_dssp CCC----
T ss_pred CCCCCCh
Confidence 9987654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.8e-07 Score=93.14 Aligned_cols=71 Identities=18% Similarity=0.145 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhhc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISKL 186 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~~ 186 (538)
+|+..+..+++++|+++++|++|||+.+|+.+++.+|+ ++.+.++ ... .+. .+++++.+ ..+.+...+.+.
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~--~~~-~~~----~a~~v~~~~~~dGV~~~l~~~ 269 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA--IPS-VKE----VANFVTKSNLEDGVAFAIEKY 269 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS--CHH-HHH----HCSEECCCTTTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCC--cHH-HHh----hCCEEecCCCcchHHHHHHHH
Confidence 45667888999999999999999999999999999998 5556543 232 222 26777755 344555556554
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.65 E-value=3.8e-08 Score=96.55 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC-chhhHHhhhhc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD-EQEHVNDISKL 186 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~-~~~~~~~i~~~ 186 (538)
+|+..+..+++++|++|++|++|||+.+|+.+++.+|+. +.+ +...... + ..+++++.+. .+.+...+.+.
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~--~n~~~~~-~----~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAM--GQAKEDV-K----AAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EEC--TTSCHHH-H----HHSSEECCCGGGTHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCce-EEe--cCccHHH-H----hhCCEEeccCchhhHHHHHHHh
Confidence 567889999999999999999999999999999999985 333 3333332 2 2367777553 33355555544
Q ss_pred C
Q psy8912 187 G 187 (538)
Q Consensus 187 g 187 (538)
|
T Consensus 259 ~ 259 (261)
T 2rbk_A 259 G 259 (261)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=98.64 E-value=4.3e-08 Score=90.72 Aligned_cols=85 Identities=13% Similarity=0.115 Sum_probs=64.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCC---Cch-HHHHHHHhh-cCCccccccceeecCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRT---TEM-LRAHQLVDL-FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss---~~~-~~a~~~L~~-lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+++ ++++|+||+ +.. ......|+. +++..||+ .+.++++. ++ ++|
T Consensus 67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~--~i~~~~~~--------~l----~~~ 131 (180)
T 3bwv_A 67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQH--FVFCGRKN--------II----LAD 131 (180)
T ss_dssp SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGG--EEECSCGG--------GB----CCS
T ss_pred cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCccc--EEEeCCcC--------ee----ccc
Confidence 578999999999999985 999999998 321 122444555 67777887 45555542 12 789
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+||||+..|+. ++|| .+++|+++.+
T Consensus 132 l~ieDs~~~i~--~aaG-~~i~~~~~~~ 156 (180)
T 3bwv_A 132 YLIDDNPKQLE--IFEG-KSIMFTASHN 156 (180)
T ss_dssp EEEESCHHHHH--HCSS-EEEEECCGGG
T ss_pred EEecCCcchHH--HhCC-CeEEeCCCcc
Confidence 99999999985 4589 9999998644
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.3e-07 Score=91.68 Aligned_cols=70 Identities=11% Similarity=0.233 Sum_probs=50.9
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
+|+..+..+++++|++|++|++|||+.+|+.+++.+|+. +.+ +...... +. .+++++.+ ..+.+...+.+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~-v~~--~n~~~~~-~~----~a~~v~~~~~~dGv~~~i~~ 260 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAM--ENAIEKV-KE----ASDIVTLTNNDSGVSYVLER 260 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EEC--TTSCHHH-HH----HCSEECCCTTTTHHHHHHTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCE-EEe--cCCCHHH-Hh----hCCEEEccCCcchHHHHHHH
Confidence 577889999999999999999999999999999999984 334 3333332 22 26777755 34445555544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.63 E-value=9.5e-09 Score=102.32 Aligned_cols=213 Identities=13% Similarity=0.121 Sum_probs=118.3
Q ss_pred Ccccccccccccccccccccccccccc-----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc--
Q psy8912 287 HKEIYPRQKTKHLKKDRVEDAKGTLLN-----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY-- 359 (538)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 359 (538)
|.+.|++.+.|- -+-|=+|||.+ +-+.....++.|+++|+..++||=-+. ..+..++..+++..++++
T Consensus 12 ~~~~~~~~~~kl----i~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~-~~~~~~~~~l~~~~~~I~~N 86 (283)
T 3dao_A 12 HENLYFQGMIKL----IATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQF-SSEFKLFAPIKHKLLYITDG 86 (283)
T ss_dssp -------CCCCE----EEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHTGGGGGGCEEEETT
T ss_pred hhhhhhccCceE----EEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCcEEEECC
Confidence 678888887664 47899999984 446678889999999999999985443 356678888887755544
Q ss_pred --------ccccCc--ch-hhhhhh-hcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCC
Q psy8912 360 --------KEIFPA--EK-KIKHFA-NLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYR 426 (538)
Q Consensus 360 --------~~~~~~--~~-~~~~~~-~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~p 426 (538)
+.++.. +. -++.+- .+++. +.+ .+.+..-+..-.....+ .. ...+...+. ..+
T Consensus 87 Ga~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~----~~~ 152 (283)
T 3dao_A 87 GTVVRTPKEILKTYPMDEDIWKGMCRMVRDELPAC---DYFAATPDFCFAEDGGS-PI------FHLLRDSYG----FEM 152 (283)
T ss_dssp TTEEECSSCEEEECCCCHHHHHHHHHHHHHHCTTC---EEEEECSSCEEESCTTS-HH------HHHHHHTSC----CCE
T ss_pred CcEEEECCEEEEEecCCHHHHHHHHHHHHHhcCCc---eEEEEeCCeEEEeCCCH-HH------HHHHHHhhc----CCc
Confidence 233322 10 111111 11111 122 23333333111111100 00 011112122 222
Q ss_pred CHHHHHHHHH-HCCceEEEEeCCCc-hHHHHHHHhhcCCccccc-------cceeecC--CchHHHHHHHHHhCCCCCcE
Q psy8912 427 DVPAILKYLK-QNNCLVAAASRTTE-MLRAHQLVDLFNWNQHFD-------HKEIFPG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 427 Gv~e~L~~Lk-~~GiklaIASss~~-~~~a~~~L~~lgL~~yFd-------~~~i~~~--~k~~~~~kal~~lgi~pee~ 495 (538)
.+.+-|..++ +..+++.+...+.. ....+.+.+.++ +.|. ..++.+. +|...+.++++++|++++++
T Consensus 153 ~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ 230 (283)
T 3dao_A 153 REVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEV 230 (283)
T ss_dssp EECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGE
T ss_pred eEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHE
Confidence 2222344455 77899999832222 222334445554 2222 2244443 68888999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++|||+.||++.++.+|+ .+++.++
T Consensus 231 ia~GD~~NDi~ml~~ag~-~vam~na 255 (283)
T 3dao_A 231 CCFGDNLNDIEMLQNAGI-SYAVSNA 255 (283)
T ss_dssp EEEECSGGGHHHHHHSSE-EEEETTS
T ss_pred EEECCCHHHHHHHHhCCC-EEEcCCC
Confidence 999999999999999994 5666664
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.5e-07 Score=93.83 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
.|...+..+++.+|+++++|++|||+.+|+.+++.+|+ ++.+.++. .. .+. .+++++.+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~--~~-~~~----~a~~v~~~ 274 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAR--ED-IKS----IADAVTLT 274 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCC--HH-HHH----HCSEECCC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCC--HH-HHh----hCceeecC
Confidence 35677999999999999999999999999999999999 67776543 22 222 26777655
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=4.8e-07 Score=87.35 Aligned_cols=166 Identities=12% Similarity=0.124 Sum_probs=105.5
Q ss_pred ccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccccccCcchhhhhhhhcccC
Q psy8912 303 RVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKD 378 (538)
Q Consensus 303 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (538)
-+-|=+|||.+ +.+...+.++.|+++|+..++||-.+. ..+..++..+|+...+++.- +.
T Consensus 6 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~-~~~~~~~~~l~~~~~~i~~n---Ga------------ 69 (231)
T 1wr8_A 6 ISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTV-QFAEAASILIGTSGPVVAED---GG------------ 69 (231)
T ss_dssp EEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHHTCCSCEEEGG---GT------------
T ss_pred EEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCh-hHHHHHHHHcCCCCeEEEeC---Cc------------
Confidence 35678898876 556678889999999999999985543 34567778888865444321 11
Q ss_pred cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHH-HC-Cce-----------EEEE
Q psy8912 379 SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLK-QN-NCL-----------VAAA 445 (538)
Q Consensus 379 ~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk-~~-Gik-----------laIA 445 (538)
.++| +.. . + +. -.+ +.+.++++.++ +. |+. ++++
T Consensus 70 --------~i~~-~~~-~-----------------~---~~--~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (231)
T 1wr8_A 70 --------AISY-KKK-R-----------------I---FL--ASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM 116 (231)
T ss_dssp --------EEEE-TTE-E-----------------E---ES--CCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC
T ss_pred --------EEEe-CCE-E-----------------E---Ee--ccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE
Confidence 0111 000 0 0 00 000 22233333332 22 222 3666
Q ss_pred e-CCCchHHHHHHHhhcCCcccccc------ceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 446 S-RTTEMLRAHQLVDLFNWNQHFDH------KEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 446 S-ss~~~~~a~~~L~~lgL~~yFd~------~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+ +.. ++.++.+++.++ ++|+. .++.+. +|+..+..+++++|++|++|++|||+.+|++.++.+|+. +
T Consensus 117 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v 192 (231)
T 1wr8_A 117 RETIN-VETVREIINELN--LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-V 192 (231)
T ss_dssp TTTSC-HHHHHHHHHHTT--CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-E
T ss_pred CCCCC-HHHHHHHHHhcC--CcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-E
Confidence 6 333 456778888865 45552 233333 578889999999999999999999999999999999998 5
Q ss_pred EECCC
Q psy8912 517 HVKDG 521 (538)
Q Consensus 517 ~V~dg 521 (538)
+|.++
T Consensus 193 ~~~~~ 197 (231)
T 1wr8_A 193 AVAQA 197 (231)
T ss_dssp ECTTS
T ss_pred EecCC
Confidence 67665
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.56 E-value=5.9e-08 Score=94.98 Aligned_cols=206 Identities=14% Similarity=0.083 Sum_probs=117.1
Q ss_pred cccccccccccc---cccchHHHHHHhhhcCcceeeeccc--cccchhhhHHhhhCCCcccccccccCcchhhhh-hhhc
Q psy8912 302 DRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRT--VHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKH-FANL 375 (538)
Q Consensus 302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 375 (538)
--+-|-.|||.+ +.|.+.+.++.|+++|++.+++|=. .+.......|+.+|+..-+ .+++.+..-..+ .+..
T Consensus 10 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~--~~ii~~~~~~~~~~~~~ 87 (268)
T 3qgm_A 10 GYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGE--DEILVATYATARFIARE 87 (268)
T ss_dssp EEEEECBTTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG--GGEEEHHHHHHHHHHHH
T ss_pred EEEEcCcCcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH--HHeeCHHHHHHHHHHhh
Confidence 446788999975 5688999999999999999999642 2334456677888886432 455554222211 1111
Q ss_pred ccCcCCCccceEEeecC-------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCC
Q psy8912 376 KKDSKIKYKDMVFFDDE-------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 448 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss 448 (538)
. ....+.+...+ ...+.-+.... ...+...+ .....++++.+.+..+++ |.+ .++|+.
T Consensus 88 ~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~-~i~~n~ 152 (268)
T 3qgm_A 88 K-----PNAKVFTTGEEGLIEELRLAGLEIVDYDE-------AEYLVVGS-NRKINFELMTKALRACLR-GIR-YIATNP 152 (268)
T ss_dssp S-----TTCEEEECCCHHHHHHHHHTTCEECCTTT-------CSEEEECC-CTTCBHHHHHHHHHHHHH-TCE-EEESCC
T ss_pred C-----CCCeEEEEcCHHHHHHHHHcCCeecCCCC-------CCEEEEec-CCCCCHHHHHHHHHHHhC-CCc-EEEEeC
Confidence 1 11112221111 11111000000 00000001 112346677788888775 554 355554
Q ss_pred CchHHHHHHHhhcC---Cccccc---cce---eecCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEE
Q psy8912 449 TEMLRAHQLVDLFN---WNQHFD---HKE---IFPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 449 ~~~~~a~~~L~~lg---L~~yFd---~~~---i~~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V 518 (538)
+.. .........+ +...|+ ..+ ....+++..|..+++++|++|++|++|||+ .+|++.|+++|+.+++|
T Consensus 153 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v 231 (268)
T 3qgm_A 153 DRI-FPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLV 231 (268)
T ss_dssp CCE-EEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred CCc-ccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEE
Confidence 321 0000000001 111221 111 233466788999999999999999999999 69999999999999999
Q ss_pred CCCCCHH
Q psy8912 519 KDGMSHS 525 (538)
Q Consensus 519 ~dg~t~~ 525 (538)
.+|....
T Consensus 232 ~~g~~~~ 238 (268)
T 3qgm_A 232 LTGVTTR 238 (268)
T ss_dssp SSSSCCT
T ss_pred CCCCCCH
Confidence 9987643
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.55 E-value=9.5e-09 Score=99.27 Aligned_cols=120 Identities=7% Similarity=-0.046 Sum_probs=90.7
Q ss_pred CCccceEEeecC----CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 381 IKYKDMVFFDDE----ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 381 ~~~~~l~~~Dld----h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
-+.|-.||+||| |...+.- .+..+.+.||+.++|++|. ++|.++|.|++.. .+|..
T Consensus 31 ~~~~~tLVLDLDeTLvh~~~~~~------------------~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~-~ya~~ 90 (204)
T 3qle_A 31 YQRPLTLVITLEDFLVHSEWSQK------------------HGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYM-MYSDK 90 (204)
T ss_dssp -CCSEEEEEECBTTTEEEEEETT------------------TEEEEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHH
T ss_pred cCCCeEEEEeccccEEeeecccc------------------CceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcH-HHHHH
Confidence 466789999999 5443110 1234789999999999998 7799999999975 59999
Q ss_pred HHhhcCCc-cccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 457 LVDLFNWN-QHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 457 ~L~~lgL~-~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+++.++.. .||+....... .....|.|.++.+|.++++||+|||+...+......|+.+....+
T Consensus 91 vl~~LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~~ 157 (204)
T 3qle_A 91 IAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNG 157 (204)
T ss_dssp HHHHTSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCCS
T ss_pred HHHHhCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeECC
Confidence 99999987 48873211111 122347888889999999999999999998777777877765543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=6.9e-07 Score=88.33 Aligned_cols=208 Identities=12% Similarity=0.147 Sum_probs=119.6
Q ss_pred cccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc-----------ccccCcc
Q psy8912 302 DRVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY-----------KEIFPAE 366 (538)
Q Consensus 302 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 366 (538)
--+-|=+|||.+ +.+...+.++.|+++|+..++||=.+... +..++..+++..++++ +.++...
T Consensus 8 li~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~ 86 (290)
T 3dnp_A 8 LLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRS-AQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKR 86 (290)
T ss_dssp EEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHH-HHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECC
T ss_pred EEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHH-HHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecC
Confidence 346788999887 56667888999999999999997554443 4889999998744433 1122111
Q ss_pred h---hhhhhhhcccCcCCCccceEEeecCCCCcCCC-CCCccc-ccccccchHhhhcCCCCccCCCHHHHHHHHHHCCce
Q psy8912 367 K---KIKHFANLKKDSKIKYKDMVFFDDEERNARSI-SKLGVI-GIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCL 441 (538)
Q Consensus 367 ~---~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~-~p~~~i-~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gik 441 (538)
- -++.+-..-+... . .+.++.-++.-.... .+..+. -..... .+.........+++.++++.+....++
T Consensus 87 l~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~k 160 (290)
T 3dnp_A 87 ISDDHTFNIVQVLESYQ--C-NIRLLHEKYSIGNKKKVNSNLLGKALIHP---SDPIFYPVQFVESLSDLLMDEPVSAPV 160 (290)
T ss_dssp CCHHHHHHHHHHHHTSS--C-EEEEECSSCEEECCCCCCCHHHHHSCCCC---CBTTTBCEEECSCHHHHHHHSCCCCSE
T ss_pred CCHHHHHHHHHHHHHcC--c-eEEEEECCcEEeeccccchhhhhhhhccc---cccccccccccCCHHHHHhcCCCCceE
Confidence 0 1111111111122 2 233343331100000 010000 000000 001111245678999999999989999
Q ss_pred EEEEeCCCchHHHHHHHhhc-CCccccc-------cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc
Q psy8912 442 VAAASRTTEMLRAHQLVDLF-NWNQHFD-------HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 442 laIASss~~~~~a~~~L~~l-gL~~yFd-------~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a 511 (538)
+.+ +.+. + ....+++.+ +....|. ..++.+. +|+..+.++++++|++|++|++|||+.||++.++.|
T Consensus 161 i~~-~~~~-~-~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~a 237 (290)
T 3dnp_A 161 IEV-YTEH-D-IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELA 237 (290)
T ss_dssp EEE-ECCG-G-GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEE-eCCH-H-HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhc
Confidence 955 4333 2 344455543 1111222 2233332 688889999999999999999999999999999999
Q ss_pred CCEEEEECC
Q psy8912 512 GVTCIHVKD 520 (538)
Q Consensus 512 Gi~~i~V~d 520 (538)
|+.+ ++.+
T Consensus 238 g~~v-am~n 245 (290)
T 3dnp_A 238 GLGV-AMGN 245 (290)
T ss_dssp SEEE-ECTT
T ss_pred CCEE-EecC
Confidence 9744 4433
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.4e-08 Score=98.72 Aligned_cols=84 Identities=12% Similarity=0.122 Sum_probs=64.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch---HHHHHHHhhcCCcccccccee-e--cCCchHHHHHHHHHhCCCCCc
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM---LRAHQLVDLFNWNQHFDHKEI-F--PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~---~~a~~~L~~lgL~~yFd~~~i-~--~~~k~~~~~kal~~lgi~pee 494 (538)
...++||+.++|+.|+++|++++++|+.+.. +.+...|+.+||..+++...+ . ...|...+..+ ++.|. .-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L-~~~gy--~i 175 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQV-EDMGY--DI 175 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHH-HTTTC--EE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHH-HhcCC--CE
Confidence 5789999999999999999999999987642 577888999999887752122 2 23455554444 44454 45
Q ss_pred EEEEecccccHHh
Q psy8912 495 MVFFDDEERNSHD 507 (538)
Q Consensus 495 ~l~~eDs~~~I~a 507 (538)
+++|||...|+.+
T Consensus 176 v~~iGD~~~Dl~~ 188 (260)
T 3pct_A 176 VLFVGDNLNDFGD 188 (260)
T ss_dssp EEEEESSGGGGCG
T ss_pred EEEECCChHHcCc
Confidence 9999999999987
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.1e-08 Score=100.33 Aligned_cols=84 Identities=11% Similarity=0.113 Sum_probs=64.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch---HHHHHHHhhcCCcccccccee-e--cCCchHHHHHHHHHhCCCCCc
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM---LRAHQLVDLFNWNQHFDHKEI-F--PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~---~~a~~~L~~lgL~~yFd~~~i-~--~~~k~~~~~kal~~lgi~pee 494 (538)
...++||+.++|+.|+++|++++++|+.+.. +.+...|+.+||..+++...+ . ...|......+ ++.|. .-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l-~~~Gy--~i 175 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEI-EKQGY--EI 175 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHH-HHTTE--EE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHH-HhcCC--CE
Confidence 5789999999999999999999999987642 578888999999887731122 2 23565555544 44564 34
Q ss_pred EEEEecccccHHh
Q psy8912 495 MVFFDDEERNSHD 507 (538)
Q Consensus 495 ~l~~eDs~~~I~a 507 (538)
+++|||..+|+.+
T Consensus 176 v~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 176 VLYVGDNLDDFGN 188 (262)
T ss_dssp EEEEESSGGGGCS
T ss_pred EEEECCChHHhcc
Confidence 9999999999997
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=3.2e-07 Score=89.91 Aligned_cols=47 Identities=9% Similarity=-0.123 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHcCCCC--CcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 107 GQKTTHFESLKKATGIEY--KDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P--~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
.+|+.....+++++|+++ ++|++|||+.+|+.+++.+|+. +.+.++.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~ 223 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRGD 223 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSSC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCChh
Confidence 457788999999999999 9999999999999999999985 5565544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.44 E-value=3.2e-06 Score=83.06 Aligned_cols=194 Identities=14% Similarity=0.152 Sum_probs=110.2
Q ss_pred cccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCC---ccccc---cccc--------
Q psy8912 302 DRVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLS---DFFDY---KEIF-------- 363 (538)
Q Consensus 302 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~-------- 363 (538)
--+-|=+|||.+ +.+...+.++.|+++|+..++||=.+. ..+..++..+++. .++++ ..++
T Consensus 7 li~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~ 85 (279)
T 4dw8_A 7 LIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPT-YGIVPLANELRMNEFGGFILSYNGGEIINWESKEMM 85 (279)
T ss_dssp EEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEE
T ss_pred EEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEE
Confidence 346788899875 567778899999999999999974443 3567888899984 44432 1122
Q ss_pred -Ccc---hhhhhhhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcC-CCCccCCCHHHHHHHHHHC
Q psy8912 364 -PAE---KKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGG-AIIKYYRDVPAILKYLKQN 438 (538)
Q Consensus 364 -~~~---~~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~-~~v~l~pGv~e~L~~Lk~~ 438 (538)
... ..++-+-..-+.. .. .+.++.-+..-. . . .... ...... .....++++.++++.+++.
T Consensus 86 ~~~~l~~~~~~~i~~~~~~~--~~-~~~~~~~~~~~~----~-~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (279)
T 4dw8_A 86 YENVLPNEVVPVLYECARTN--HL-SILTYDGAEIVT----E-N-----SLDP-YVQKEAFLNKMAIRETNDFLTDITLP 151 (279)
T ss_dssp EECCCCGGGHHHHHHHHHHT--TC-EEEEEETTEEEE----S-C-----TTCH-HHHHHHHHHTCEEEECSCHHHHSCSC
T ss_pred EEecCCHHHHHHHHHHHHHc--CC-EEEEEECCEEEE----e-C-----CCCH-HHHHHhhhcCCCcccHHHHHHhhcCC
Confidence 110 0111111111111 11 122332221000 0 0 0011 111000 0011233566677777788
Q ss_pred CceEEEEeCCCchHHHHHHHhhcC--Cccccc-------cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHh
Q psy8912 439 NCLVAAASRTTEMLRAHQLVDLFN--WNQHFD-------HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHD 507 (538)
Q Consensus 439 GiklaIASss~~~~~a~~~L~~lg--L~~yFd-------~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~a 507 (538)
.+++.+.+.. +....+++.+. +.+.|. ..++.+. +|+..+.++++++|++|++|++|||+.||++.
T Consensus 152 ~~ki~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m 228 (279)
T 4dw8_A 152 VAKCLIVGDA---GKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSM 228 (279)
T ss_dssp CSCEEEESCH---HHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ceEEEEeCCH---HHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHH
Confidence 8898887632 23333333322 212222 2234443 68888999999999999999999999999999
Q ss_pred HcccCC
Q psy8912 508 VSPLGV 513 (538)
Q Consensus 508 Ak~aGi 513 (538)
++.+|+
T Consensus 229 ~~~ag~ 234 (279)
T 4dw8_A 229 IKFAGM 234 (279)
T ss_dssp HHHSSE
T ss_pred HHHcCc
Confidence 999994
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.2e-06 Score=86.90 Aligned_cols=214 Identities=17% Similarity=0.144 Sum_probs=110.0
Q ss_pred Ccccccccccccccccccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---
Q psy8912 287 HKEIYPRQKTKHLKKDRVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY--- 359 (538)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 359 (538)
|.+.|-+.+.| --+-|=+|||.+ +-+.....++.|+++|+..++||=-+.. .+..++..+++..++++
T Consensus 12 ~~~~~~~~~~k----li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~-~~~~~~~~l~~~~~~I~~nG 86 (285)
T 3pgv_A 12 HENLYFQGMYQ----VVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYI-DVGQIRDNLGIRSYMITSNG 86 (285)
T ss_dssp ---------CC----EEEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEECSSCGG-GGHHHHHHHCSCCEEEEGGG
T ss_pred cccccccCcce----EEEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHhcCCCccEEEcCC
Confidence 44556555544 347889999987 4556778899999999999999855544 45789999999876543
Q ss_pred --------ccccCcchhhhhhhhcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHH
Q psy8912 360 --------KEIFPAEKKIKHFANLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPA 430 (538)
Q Consensus 360 --------~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e 430 (538)
+.+|...-..+..+.+-+- ..-.--.+.++.-+..-.....|.. . ... ...+..... .
T Consensus 87 a~i~~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~-----~~~~~~~~~----~- 153 (285)
T 3pgv_A 87 ARVHDSDGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEE-M--RFF-----KEAVFNYKL----Y- 153 (285)
T ss_dssp TEEECTTSCEEEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC--------CT-----TSCCCCEEE----C-
T ss_pred eEEECCCCCEEEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHH-H--HHH-----HhcCCccEE----e-
Confidence 2222221111112222220 0001111223433311000000000 0 000 000000000 0
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHH----hhcC--Cccccc---cceeecC--CchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLV----DLFN--WNQHFD---HKEIFPG--QKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L----~~lg--L~~yFd---~~~i~~~--~k~~~~~kal~~lgi~pee~l~~e 499 (538)
-+..+...++...++++.+ ++....+. +.++ +.-.+. ..++.+. +|...+.++++++|++++++++||
T Consensus 154 ~~~~~~~~~i~ki~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~G 232 (285)
T 3pgv_A 154 EPGELDPQGISKVFFTCED-HEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFG 232 (285)
T ss_dssp CTTCSCCSSEEEEEEECSC-HHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cHHHcCCCCceEEEEeCCC-HHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 1233445666666666443 22333332 2233 111111 2234443 688889999999999999999999
Q ss_pred cccccHHhHcccCCEEEEECC
Q psy8912 500 DEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 500 Ds~~~I~aAk~aGi~~i~V~d 520 (538)
|+.||++.++.+|+- +++.+
T Consensus 233 D~~NDi~ml~~ag~~-vAm~N 252 (285)
T 3pgv_A 233 DGMNDAEMLSMAGKG-CIMAN 252 (285)
T ss_dssp CSGGGHHHHHHSSEE-EECTT
T ss_pred CcHhhHHHHHhcCCE-EEccC
Confidence 999999999999943 34444
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.39 E-value=9e-07 Score=86.65 Aligned_cols=49 Identities=10% Similarity=0.211 Sum_probs=41.2
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.+. +|+..+..+++++|++|++|++|||+.+|+++++.+|+.+ ++.+
T Consensus 180 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~n 230 (261)
T 2rbk_A 180 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQ 230 (261)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceE-EecC
Confidence 44443 6788899999999999999999999999999999999854 4443
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.5e-06 Score=85.03 Aligned_cols=46 Identities=7% Similarity=-0.162 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHcCC-CCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 108 QKTTHFESLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi-~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
.|....+.+++.+|+ +++++++|||+.+|+.+.+.+|+. +.+.++.
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~ 225 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLK 225 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCC
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCC
Confidence 466778899999998 999999999999999999999984 6665543
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.34 E-value=6.7e-07 Score=88.28 Aligned_cols=199 Identities=14% Similarity=0.114 Sum_probs=109.7
Q ss_pred ccccccccccc----ccc-hHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---cccc-------Cc--c
Q psy8912 304 VEDAKGTLLNL----YRD-IPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIF-------PA--E 366 (538)
Q Consensus 304 ~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~--~ 366 (538)
+-|=+|||.+= -+. ..+.++.|+++|+..++||=.+. ..+..++..+++..++++ ..|+ .. +
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~-~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~ 85 (271)
T 1rlm_A 7 VTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQY-YQLISFFPELKDEISFVAENGALVYEHGKQLFHGELT 85 (271)
T ss_dssp EECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSCH-HHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCC
T ss_pred EEeCCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCC
Confidence 56888998863 233 36788999999999999986553 345667777776655553 2232 11 0
Q ss_pred -hhhhh-hhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEE
Q psy8912 367 -KKIKH-FANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAA 444 (538)
Q Consensus 367 -~~~~~-~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaI 444 (538)
..++. ++.+++.... .+++..-++.-.. .+... . ........+ ..+...+. ++.+++.++++++
T Consensus 86 ~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~---~-~~~~~~~~~-~~~~~~~~----~~~~~~~~~ki~i 151 (271)
T 1rlm_A 86 RHESRIVIGELLKDKQL---NFVACGLQSAYVS--ENAPE---A-FVALMAKHY-HRLKPVKD----YQEIDDVLFKFSL 151 (271)
T ss_dssp HHHHHHHHHHHHTCTTC---EEEEEESSCEEEE--TTSCH---H-HHHHHHTTC-SSEEEESC----GGGCCSCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCc---cEEEEeCCCEEee--CCCCH---H-HHHHHHHhC-CCCEEeCc----hhhCCCceEEEEE
Confidence 01111 1111111111 1222222210000 00000 0 000001111 11111111 2335667899999
Q ss_pred EeCCCchHHHHHHHhhcC--Ccccccc-------ceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 445 ASRTTEMLRAHQLVDLFN--WNQHFDH-------KEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 445 ASss~~~~~a~~~L~~lg--L~~yFd~-------~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
+|++.. +..+++.++ +.++|+. .++.+. +|+..+.++++++|++|++|++|||+.+|+..++.+|+
T Consensus 152 ~~~~~~---~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~ 228 (271)
T 1rlm_A 152 NLPDEQ---IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARY 228 (271)
T ss_dssp ECCGGG---HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSE
T ss_pred EcCHHH---HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCC
Confidence 986532 344555544 4455542 133333 67888999999999999999999999999999999999
Q ss_pred EEEEECCC
Q psy8912 514 TCIHVKDG 521 (538)
Q Consensus 514 ~~i~V~dg 521 (538)
. +++.++
T Consensus 229 ~-va~~na 235 (271)
T 1rlm_A 229 S-FAMGNA 235 (271)
T ss_dssp E-EECTTC
T ss_pred e-EEeCCc
Confidence 5 456554
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.30 E-value=8.2e-07 Score=90.69 Aligned_cols=121 Identities=12% Similarity=0.081 Sum_probs=77.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce-e--------------------ecCC----
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK-E--------------------IYPG---- 107 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i-e--------------------~~~~---- 107 (538)
..+.|++.++|+.|++ |++++++|+... ..+....+.+++.+.+ ... . ....
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYT-QYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEH-HHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCce-EEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 4678999999999999 999999998865 6666667777663322 110 0 0000
Q ss_pred -----------CCHHHHH----------HHHHHcCCCCCc----EEEEeCCcccHHHHhhc----CCeEEEECCCCCchH
Q psy8912 108 -----------QKTTHFE----------SLKKATGIEYKD----MVFFDDEERNSHDVSPL----GVTCIHSWLMMSSGR 158 (538)
Q Consensus 108 -----------~Kp~~f~----------~ale~lgi~P~e----~L~IGDs~~DI~aAk~a----G~~tI~V~~G~~~~~ 158 (538)
.+|..|. ++....|+++++ |++|||+.+|+.+++.+ |+. |.+ ++. ..
T Consensus 180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~-vam-na~--~~ 255 (332)
T 1y8a_A 180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVA-IAF-NGN--EY 255 (332)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEE-EEE-SCC--HH
T ss_pred HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeE-EEe-cCC--HH
Confidence 0122233 111122778888 99999999999999999 996 456 432 22
Q ss_pred hHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 159 LKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 159 ~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
.+ ..+|+|+.+ ..+.+...+.+
T Consensus 256 -lk----~~Ad~v~~~~~~dGV~~~l~~ 278 (332)
T 1y8a_A 256 -AL----KHADVVIISPTAMSEAKVIEL 278 (332)
T ss_dssp -HH----TTCSEEEECSSTHHHHHHHHH
T ss_pred -HH----hhCcEEecCCCCCHHHHHHHH
Confidence 22 247888866 34444444444
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=85.01 Aligned_cols=77 Identities=9% Similarity=-0.029 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhh--CCCCCCEEEeCC-chhhHHhhh
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEAT--GIDYKDMIYFDD-EQEHVNDIS 184 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l--~~~~~d~Ii~d~-~~~~~~~i~ 184 (538)
+|+..+..+++.+|++++++++|||+.+|+.+++.+|+ ++.+.++ .....+.. ....++++..+. .+.+...+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~-~va~~na--~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNA--QPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTC--CHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCc-EEEEcCC--cHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 46778999999999999999999999999999999888 4556443 33322211 111256776553 444555555
Q ss_pred hcC
Q psy8912 185 KLG 187 (538)
Q Consensus 185 ~~g 187 (538)
+.+
T Consensus 239 ~~~ 241 (244)
T 1s2o_A 239 HFD 241 (244)
T ss_dssp HTT
T ss_pred Hhc
Confidence 543
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=9.1e-07 Score=96.34 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=80.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-C-------------CCCCCcceeecCCCCHHH------
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------------LNQYFSNKEIYPGQKTTH------ 112 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-g-------------L~~~Fd~ie~~~~~Kp~~------ 112 (538)
.+..-|.+..+|+.||+.| ++.++||+.. ..+..+++.+ | |.+|||.+ +....||..
T Consensus 244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~-~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~v-I~~A~KP~FF~~~~p 320 (555)
T 2jc9_A 244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDY-KYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLI-LVDARKPLFFGEGTV 320 (555)
T ss_dssp HBCCCTHHHHHHHHHHHHS-EEEEECSSCH-HHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEE-EESCCTTGGGTTCCC
T ss_pred hcCCChHHHHHHHHHHHcC-CEEEEeCCCh-HHHHHHHHHhcCCCccccccccccchhhhCCEE-EEeCCCCCcccCCCc
Confidence 3455688999999999999 9999999988 9999999887 6 45789975 333344431
Q ss_pred ------------------------------HHHHHHHcCCCCCcEEEEeCCc-ccHHHHh-hcCCeEEEECC
Q psy8912 113 ------------------------------FESLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCIHSWL 152 (538)
Q Consensus 113 ------------------------------f~~ale~lgi~P~e~L~IGDs~-~DI~aAk-~aG~~tI~V~~ 152 (538)
+..+++.+|+.+.+++||||.. .||..++ .+|+++++|..
T Consensus 321 fr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 321 LRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp EEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred ceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 4788999999999999999997 5999997 89999999965
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.2e-07 Score=89.64 Aligned_cols=117 Identities=12% Similarity=0.047 Sum_probs=88.0
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
..+++|+|+|+||....... .....+...||+.++|+.|. +++.++|.|++.. .+++.+++.++
T Consensus 33 ~~~tLVLDLDeTLvh~~~~~--------------~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~-~ya~~vl~~LD 96 (204)
T 3qle_A 33 RPLTLVITLEDFLVHSEWSQ--------------KHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYM-MYSDKIAEKLD 96 (204)
T ss_dssp CSEEEEEECBTTTEEEEEET--------------TTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHHHHHHTS
T ss_pred CCeEEEEeccccEEeeeccc--------------cCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcH-HHHHHHHHHhC
Confidence 35799999999995421100 01124678899999999998 6799999999988 99999999999
Q ss_pred CC-CCCcceeecC--CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 95 LN-QYFSNKEIYP--GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 95 L~-~~Fd~ie~~~--~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
.. .+|+..-... ...+..|.+.++.+|.++++|++|+|++.........|+..
T Consensus 97 p~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I 152 (204)
T 3qle_A 97 PIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPM 152 (204)
T ss_dssp TTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEEC
T ss_pred CCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEe
Confidence 86 4787641111 11234477778889999999999999999877666666663
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.10 E-value=3e-06 Score=85.03 Aligned_cols=91 Identities=7% Similarity=-0.014 Sum_probs=64.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-------------eec------CCCCHHH
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-------------EIY------PGQKTTH 112 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-------------e~~------~~~Kp~~ 112 (538)
....+.||+.++++.|+++|+++.++|+... ..++.+++.+|+......+ ... ...++..
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~-~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~ 216 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIG-DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDG 216 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEH-HHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccH
Confidence 4578999999999999999999999999977 9999999999975321111 001 1123333
Q ss_pred HHHHH--HHcCCCCCcEEEEeCCcccHHHHhhc
Q psy8912 113 FESLK--KATGIEYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 113 f~~al--e~lgi~P~e~L~IGDs~~DI~aAk~a 143 (538)
..+.. ..+.-...+++++||+.+|..|++.+
T Consensus 217 ~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l 249 (297)
T 4fe3_A 217 ALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 249 (297)
T ss_dssp HHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred HHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence 22222 22333557899999999999998744
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.10 E-value=5.8e-07 Score=88.37 Aligned_cols=193 Identities=12% Similarity=0.072 Sum_probs=96.7
Q ss_pred ccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCc---cccc-----------ccccC
Q psy8912 303 RVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSD---FFDY-----------KEIFP 364 (538)
Q Consensus 303 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------~~~~~ 364 (538)
-+-|=+|||.+ +.+...+.++.|+++|+..++||=.+. ..+..++..+++.. ++++ +.++.
T Consensus 8 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~-~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~ 86 (279)
T 3mpo_A 8 IAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCTGRPL-TGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTN 86 (279)
T ss_dssp EEECC-----------CHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEE
T ss_pred EEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEe
Confidence 46788999886 566778899999999999999974443 34678889999874 3332 22222
Q ss_pred cch---hhhhhhhcccCcCCCccceEEeecCCCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHH--HC
Q psy8912 365 AEK---KIKHFANLKKDSKIKYKDMVFFDDEERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLK--QN 438 (538)
Q Consensus 365 ~~~---~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk--~~ 438 (538)
..- .++.+-..-+...+ .+.++.-+..-.... +++.. . ...+ ...+|++...++.+. ..
T Consensus 87 ~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~----~~~~---~~~~~~~~~~~~~~~~~~~ 151 (279)
T 3mpo_A 87 HSLTYEDYIDLEAWARKVRA---HFQIETPDYIYTANKDISAYT-----I----AESY---LVRMLIQYREVSETPRDLT 151 (279)
T ss_dssp CCCCHHHHHHHHHHHHHTTC---CEEEECSSCEEECCSBCCHHH-----H----HHHH---HHTCCEEECCGGGSCTTCC
T ss_pred cCCCHHHHHHHHHHHHHcCC---eEEEEECCEEEEcCCcchHHH-----H----HHhh---ccCCcceecCHHHhhccCC
Confidence 110 11111111111122 133343331100000 01110 0 0000 011122112223332 22
Q ss_pred CceEEEEeCCCchHHHHHHHhhcC--Cccccc-------cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHh
Q psy8912 439 NCLVAAASRTTEMLRAHQLVDLFN--WNQHFD-------HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHD 507 (538)
Q Consensus 439 GiklaIASss~~~~~a~~~L~~lg--L~~yFd-------~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~a 507 (538)
-+++.+. .+ ++....+++.+. +.++|. ..++.+. +|+..+.++++++|++|++|++|||+.||++.
T Consensus 152 ~~ki~~~--~~-~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m 228 (279)
T 3mpo_A 152 ISKAMFV--DY-PQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTM 228 (279)
T ss_dssp CCEEEEE--CC-HHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHH
T ss_pred cEEEEEc--CC-HHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHH
Confidence 2344333 33 335555666553 112222 2233332 58888999999999999999999999999999
Q ss_pred HcccCCE
Q psy8912 508 VSPLGVT 514 (538)
Q Consensus 508 Ak~aGi~ 514 (538)
++.||+.
T Consensus 229 ~~~ag~~ 235 (279)
T 3mpo_A 229 IKYAGLG 235 (279)
T ss_dssp HHHSTEE
T ss_pred HHhcCce
Confidence 9999954
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.9e-06 Score=82.84 Aligned_cols=201 Identities=10% Similarity=0.108 Sum_probs=105.6
Q ss_pred cccccccccccccc-----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc-----------cccc
Q psy8912 300 KKDRVEDAKGTLLN-----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY-----------KEIF 363 (538)
Q Consensus 300 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 363 (538)
.|--+-|=+|||.+ +-+.....++.|+++|+..++||=-|.... ..+..+++.+ +++ +.+|
T Consensus 12 iKli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~--~~~~~l~~~~-~i~~nGa~i~~~~~~~~~ 88 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDL--HEIDAVPYDG-VIALNGAECVLRDGSVIR 88 (268)
T ss_dssp CCEEEECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCC--GGGTTSCCCE-EEEGGGTEEEETTSCEEE
T ss_pred eEEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHh--HHHHhcCCCc-EEEeCCcEEEEcCCeEEE
Confidence 34567899999986 345677889999999999999975444433 3456677633 222 1122
Q ss_pred Ccc---hhhhhhhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCc
Q psy8912 364 PAE---KKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNC 440 (538)
Q Consensus 364 ~~~---~~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gi 440 (538)
... ..++..-..-+...+ .+.+..-++.-... +.. ......+..+..........+ +.+.+.-+
T Consensus 89 ~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 155 (268)
T 3r4c_A 89 KVAIPAQDFRKSMELAREFDF---AVALELNEGVFVNR--LTP------TVEQIAGIVEHPVPPVVDIEE--MFERKECC 155 (268)
T ss_dssp ECCCCHHHHHHHHHHHHHTTC---EEEEEETTEEEESC--CCH------HHHHHHHHHTCCCCCBCCHHH--HHHHSCCC
T ss_pred EecCCHHHHHHHHHHHHHcCc---EEEEEECCEEEEeC--CcH------HHHHHHHHcCCCCCcccchHH--HhccCceE
Confidence 110 011111111111111 12333333211111 111 001112223322222223330 22234445
Q ss_pred eEEEEeCCCchHHHHHHHhhcCCccccc----cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCE
Q psy8912 441 LVAAASRTTEMLRAHQLVDLFNWNQHFD----HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 441 klaIASss~~~~~a~~~L~~lgL~~yFd----~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
++.+.+ +. +....+++.+.-...+. +.++.+. +|...+.++++++|++|++|++|||+.||++.++.+|+.
T Consensus 156 ~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~ 232 (268)
T 3r4c_A 156 QLCFYF-DE--EAEQKVMPLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG 232 (268)
T ss_dssp CEEEEC-CH--HHHHHHGGGCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred EEEEec-Ch--HHHHHHHHhCCCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe
Confidence 665554 32 23344554432111110 2234443 688889999999999999999999999999999999965
Q ss_pred EEEECC
Q psy8912 515 CIHVKD 520 (538)
Q Consensus 515 ~i~V~d 520 (538)
+++.+
T Consensus 233 -vam~n 237 (268)
T 3r4c_A 233 -VAMGN 237 (268)
T ss_dssp -EECTT
T ss_pred -EEeCC
Confidence 44444
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.07 E-value=1.5e-05 Score=77.49 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=54.2
Q ss_pred HCCc-eEEEEeCCCchHHHHHHHhhcCCcccccc---------ceeecC--CchHHHHHHHHHhCCCCCcEEEEeccccc
Q psy8912 437 QNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDH---------KEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERN 504 (538)
Q Consensus 437 ~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd~---------~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~ 504 (538)
..++ ++.+. .. ++....+++.++. .|+. .++.+. +|+..+.++++++|++|++|++|||+.||
T Consensus 154 ~~~~~ki~~~--~~-~~~~~~~~~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~ND 228 (274)
T 3fzq_A 154 SQDIHKICLW--SN-EKVFDEVKDILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQND 228 (274)
T ss_dssp SCCCCEEEEE--CC-HHHHHHHHHHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGG
T ss_pred ccCeEEEEEE--cC-HHHHHHHHHHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhH
Confidence 3444 55555 33 3466667776653 2331 123333 57888999999999999999999999999
Q ss_pred HHhHcccCCEEEEECC
Q psy8912 505 SHDVSPLGVTCIHVKD 520 (538)
Q Consensus 505 I~aAk~aGi~~i~V~d 520 (538)
++.++.||+ .+++.+
T Consensus 229 i~m~~~ag~-~vam~n 243 (274)
T 3fzq_A 229 IVMFQASDV-TIAMKN 243 (274)
T ss_dssp HHHHHTCSE-EEEETT
T ss_pred HHHHHhcCc-eEEecC
Confidence 999999994 333444
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.4e-06 Score=86.93 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=53.9
Q ss_pred cccccccccccccc---cccchHHHHHHhhhcCcceeeecccc--cc-chhhhHHhhhCCCcccccccccCcchhhhhh
Q psy8912 300 KKDRVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTV--HI-RNAYSLLHLLGLSDFFDYKEIFPAEKKIKHF 372 (538)
Q Consensus 300 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (538)
+|--+-|-+|+|.. .+|++.+.+++|++.|++..++|-.+ +. ..+..|-+.||+. ....||+.|..=+..+
T Consensus 13 ~~~~l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~--~~~~~i~ts~~~~~~~ 89 (352)
T 3kc2_A 13 KIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD--VSPLQIIQSHTPYKSL 89 (352)
T ss_dssp CEEEEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC--CCGGGEECTTGGGGGG
T ss_pred CCEEEEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC--CChhhEeehHHHHHHH
Confidence 34457899999865 78999999999999999999999654 33 3455555579995 5788999885455554
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.02 E-value=2.7e-05 Score=77.31 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=41.4
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|...+..+++.+|+++++|++|||+.+|+..++.+|+ .++|.++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~ 260 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA 260 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC
Confidence 68888999999999999999999999999999999999 6778765
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.9e-06 Score=90.37 Aligned_cols=85 Identities=11% Similarity=0.099 Sum_probs=68.0
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc-ccccceeecCCc-hHHHHHHHHHh-CCCCCc
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQK-TTHFANLKKAT-GIEYKD 494 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~-yFd~~~i~~~~k-~~~~~kal~~l-gi~pee 494 (538)
+...+.++||+.+||+++. ++|.++|.|++.. .+|.++++.++... ||+. .+.+.+. ...|.|.++++ |.++++
T Consensus 70 ~~~~v~~RPg~~eFL~~l~-~~yeivI~Tas~~-~yA~~vl~~LDp~~~~f~~-ri~sr~~~g~~~~KdL~~L~~~dl~~ 146 (372)
T 3ef0_A 70 SCYYIKFRPGLAQFLQKIS-ELYELHIYTMGTK-AYAKEVAKIIDPTGKLFQD-RVLSRDDSGSLAQKSLRRLFPCDTSM 146 (372)
T ss_dssp EEEEEEECTTHHHHHHHHH-TTEEEEEECSSCH-HHHHHHHHHHCTTSCSSSS-CEECTTTSSCSSCCCGGGTCSSCCTT
T ss_pred EEEEEEECcCHHHHHHHHh-cCcEEEEEeCCcH-HHHHHHHHHhccCCceeee-EEEEecCCCCcceecHHHhcCCCCce
Confidence 4556889999999999999 7899999999975 59999999999988 8873 2333322 22366777776 999999
Q ss_pred EEEEecccccH
Q psy8912 495 MVFFDDEERNS 505 (538)
Q Consensus 495 ~l~~eDs~~~I 505 (538)
||+|||+....
T Consensus 147 viiiDd~~~~~ 157 (372)
T 3ef0_A 147 VVVIDDRGDVW 157 (372)
T ss_dssp EEEEESCSGGG
T ss_pred EEEEeCCHHHc
Confidence 99999998654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.5e-05 Score=76.30 Aligned_cols=65 Identities=8% Similarity=-0.065 Sum_probs=48.6
Q ss_pred HHHHHHHhhcCCcccccc--ceeec-CCchHHHHHHHHHhCCCC--CcEEEEecccccHHhHcccCCEEE
Q psy8912 452 LRAHQLVDLFNWNQHFDH--KEIFP-GQKTTHFANLKKATGIEY--KDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 452 ~~a~~~L~~lgL~~yFd~--~~i~~-~~k~~~~~kal~~lgi~p--ee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+.....|+..++.-++.. .++.+ .+|+..+.++++++|+++ ++|++|||+.+|+..++.+|+.++
T Consensus 149 ~~~~~~l~~~~~~~~~s~~~~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va 218 (259)
T 3zx4_A 149 EAVLEALEAVGLEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVY 218 (259)
T ss_dssp HHHHHHHHHTTCEEEECSSSEEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEE
T ss_pred HHHHHHHHHCCcEEEecCceEEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEE
Confidence 345556666665543331 23333 367888999999999999 999999999999999999998643
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=97.91 E-value=5.8e-06 Score=80.47 Aligned_cols=198 Identities=18% Similarity=0.201 Sum_probs=101.9
Q ss_pred ccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc----------ccccCc---
Q psy8912 303 RVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY----------KEIFPA--- 365 (538)
Q Consensus 303 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--- 365 (538)
-+-|=+|||.+ +.+...+.++.|+++|+..++||=.+ ...+..++..|++.. +.+ +.++..
T Consensus 6 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aTGR~-~~~~~~~~~~l~~~~-~i~~nGa~i~~~~~~i~~~~~~ 83 (258)
T 2pq0_A 6 VFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRA-PFMFEHVRKQLGIDS-FVSFNGQYVVFEGNVLYKQPLR 83 (258)
T ss_dssp EEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEECSSC-GGGSHHHHHHHTCCC-EEEGGGTEEEETTEEEEECCCC
T ss_pred EEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHhcCCCE-EEECCCCEEEECCEEEEEecCC
Confidence 35688899987 44556778999999999999987444 345677888888765 342 112211
Q ss_pred chhhhhhhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEE
Q psy8912 366 EKKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAA 445 (538)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIA 445 (538)
...++.+-..-+.. ..+ +.++.-+..-.. .+.. . ........++. .++++.+.+..+ ...+++.+.
T Consensus 84 ~~~~~~i~~~~~~~--~~~-~~~~~~~~~~~~--~~~~-~----~~~~~~~~~~~---~~~~~~~~~~~~-~~~~k~~~~ 149 (258)
T 2pq0_A 84 REKVRALTEEAHKN--GHP-LVFMDAEKMRAS--IGDH-P----HIHVSMASLKF---AHPPVDPLYYEN-KDIYQALLF 149 (258)
T ss_dssp HHHHHHHHHHHHHT--TCC-EEEECSSCEEES--SSSC-H----HHHHHHHHTTC---CCCCBCTTGGGG-SCCCEEEEC
T ss_pred HHHHHHHHHHHHhC--CCe-EEEEeCCcEEEe--cCCc-H----HHHHHHHhhcC---Cccccccchhhc-cCceEEEEE
Confidence 01111111111111 122 223322210000 0000 0 00001111111 111111112222 244566555
Q ss_pred eCCCchHHHHHHHhhcC---Cccccc-cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEEC
Q psy8912 446 SRTTEMLRAHQLVDLFN---WNQHFD-HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 446 Sss~~~~~a~~~L~~lg---L~~yFd-~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
+.. + ......+.+. +..... +.++.+. +|...+..+++++|++|++|++|||+.||++.++.+|+.++ +.
T Consensus 150 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va-m~ 225 (258)
T 2pq0_A 150 CRA--E-EEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA-MG 225 (258)
T ss_dssp SCH--H-HHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE-ET
T ss_pred CCH--H-HHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE-eC
Confidence 421 2 2232322221 111111 2234333 78888999999999999999999999999999999998654 54
Q ss_pred C
Q psy8912 520 D 520 (538)
Q Consensus 520 d 520 (538)
+
T Consensus 226 n 226 (258)
T 2pq0_A 226 N 226 (258)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=97.86 E-value=3.8e-05 Score=74.18 Aligned_cols=95 Identities=13% Similarity=0.102 Sum_probs=74.7
Q ss_pred CCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc---------c--ccce----------------------
Q psy8912 425 YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH---------F--DHKE---------------------- 471 (538)
Q Consensus 425 ~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y---------F--d~~~---------------------- 471 (538)
-|.+.+.|++|+++|++++++|..+. ..++.+++.+++..+ + +...
T Consensus 24 ~~~~~~~l~~l~~~g~~~~i~TGr~~-~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~ 102 (227)
T 1l6r_A 24 STKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSM 102 (227)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSC
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCc-HHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcC
Confidence 35688999999999999999998864 477888888887642 1 1111
Q ss_pred --------------------------------------------eec--CCchHHHHHHHHHhCCCCCcEEEEecccccH
Q psy8912 472 --------------------------------------------IFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNS 505 (538)
Q Consensus 472 --------------------------------------------i~~--~~k~~~~~kal~~lgi~pee~l~~eDs~~~I 505 (538)
+.+ .+|...+.++++++|++++++++|||+.+|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~ 182 (227)
T 1l6r_A 103 RSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDM 182 (227)
T ss_dssp BCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred CccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhH
Confidence 112 2567778999999999999999999999999
Q ss_pred HhHcccCCEEEEECCC
Q psy8912 506 HDVSPLGVTCIHVKDG 521 (538)
Q Consensus 506 ~aAk~aGi~~i~V~dg 521 (538)
..++.+|+. +++.++
T Consensus 183 ~m~~~ag~~-va~~n~ 197 (227)
T 1l6r_A 183 PMFQLPVRK-ACPANA 197 (227)
T ss_dssp HHHTSSSEE-EECTTS
T ss_pred HHHHHcCce-EEecCc
Confidence 999999985 566654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.84 E-value=4.1e-05 Score=75.99 Aligned_cols=50 Identities=24% Similarity=0.358 Sum_probs=43.0
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|...+..+++++|+++++|++|||+.+|+..++.+|+ .+++.++
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~ 242 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA 242 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCC
Confidence 44444 78888999999999999999999999999999999998 5666654
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.83 E-value=5.7e-05 Score=84.52 Aligned_cols=104 Identities=14% Similarity=0.179 Sum_probs=81.5
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
++.|++.+.++.|+++|++++++|+.+. ..++.+.+.+|+..+|.. ..|..|....+.+.+ . ++++||||+.
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~-~~a~~ia~~lgi~~~~~~--~~P~~K~~~v~~l~~----~-~~v~~vGDg~ 528 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIAE--VLPHQKSEEVKKLQA----K-EVVAFVGDGI 528 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECS--CCTTCHHHHHHHHTT----T-CCEEEEECSS
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCEEEEe--CCHHhHHHHHHHHhh----C-CeEEEEeCCH
Confidence 4679999999999999999999999988 999999999999877765 455566665555443 3 8899999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+|+.+.+.+|+. +.+..|.. .....+|++..+
T Consensus 529 ND~~al~~A~vg-iamg~g~~-------~a~~~AD~vl~~ 560 (645)
T 3j08_A 529 NDAPALAQADLG-IAVGSGSD-------VAVESGDIVLIR 560 (645)
T ss_dssp SCHHHHHHSSEE-EEECCCSC-------CSSCCSSSEESS
T ss_pred hHHHHHHhCCEE-EEeCCCcH-------HHHHhCCEEEec
Confidence 999999999953 44544332 233467888854
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.7e-05 Score=83.06 Aligned_cols=84 Identities=13% Similarity=0.180 Sum_probs=65.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC-CCcceeecCCCCHHHHHHHHHHc-CCCCCcEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ-YFSNKEIYPGQKTTHFESLKKAT-GIEYKDMV 128 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~-~Fd~ie~~~~~Kp~~f~~ale~l-gi~P~e~L 128 (538)
...+.+.||+.++|+.|. .++.++|.|++.. .++..+++.++... +|.........-+..|.+.++++ |.++++|+
T Consensus 71 ~~~v~~RPg~~eFL~~l~-~~yeivI~Tas~~-~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~~~KdL~~L~~~dl~~vi 148 (372)
T 3ef0_A 71 CYYIKFRPGLAQFLQKIS-ELYELHIYTMGTK-AYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVV 148 (372)
T ss_dssp EEEEEECTTHHHHHHHHH-TTEEEEEECSSCH-HHHHHHHHHHCTTSCSSSSCEECTTTSSCSSCCCGGGTCSSCCTTEE
T ss_pred EEEEEECcCHHHHHHHHh-cCcEEEEEeCCcH-HHHHHHHHHhccCCceeeeEEEEecCCCCcceecHHHhcCCCCceEE
Confidence 345677899999999999 6799999999988 99999999999877 78742121111123355556665 99999999
Q ss_pred EEeCCccc
Q psy8912 129 FFDDEERN 136 (538)
Q Consensus 129 ~IGDs~~D 136 (538)
+|+|++.-
T Consensus 149 iiDd~~~~ 156 (372)
T 3ef0_A 149 VIDDRGDV 156 (372)
T ss_dssp EEESCSGG
T ss_pred EEeCCHHH
Confidence 99999864
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.75 E-value=4.2e-05 Score=69.60 Aligned_cols=97 Identities=14% Similarity=0.037 Sum_probs=60.0
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc--HHHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--ILHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~--p~~~~~~L~~l 93 (538)
+|+|+||+||||+... +.....+.|++.++|+.|+++|++++++|+.+. ...+...++.+
T Consensus 3 ~k~i~~DlDGTL~~~~------------------~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~ 64 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHR------------------YPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR 64 (142)
T ss_dssp CCEEEECCBTTTBCSC------------------TTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred CeEEEEECcCCCCCCC------------------CccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc
Confidence 5899999999998621 001124678999999999999999999999863 13455556667
Q ss_pred CCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCccc
Q psy8912 94 NLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERN 136 (538)
Q Consensus 94 gL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~D 136 (538)
|+.- +.+ ....|+... ......-.+..-+||+|+...
T Consensus 65 gi~~--~~I---~~n~P~~~~-~~~~~~rK~~~~~fIDDR~~~ 101 (142)
T 2obb_A 65 GLEF--YAA---NKDYPEEER-DHQGFSRKLKADLFIDDRNVG 101 (142)
T ss_dssp TCCC--SEE---SSSSTTC----CCSCCSSCCCSEEECTTSTT
T ss_pred CCCe--EEE---EcCCchhhh-cchhhcCCcCCCEEeeccccC
Confidence 7632 221 112232110 111112235667889997643
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.74 E-value=1.2e-05 Score=82.66 Aligned_cols=152 Identities=11% Similarity=0.049 Sum_probs=100.3
Q ss_pred chhhhHHhhhCCCcccccccccCcchhhhhhhhcccC----------cCCCccceEEeecC----CCCcCCCCCCccccc
Q psy8912 342 RNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKD----------SKIKYKDMVFFDDE----ERNARSISKLGVIGI 407 (538)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~Dld----h~~~s~~~p~~~i~i 407 (538)
..+..|++-+.... -|.-.-+++.++-++|.+. +.-+.+-+||+||| |... ++
T Consensus 92 ~~~~~~~eD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~k~tLVLDLDeTLvh~~~---~~------ 158 (320)
T 3shq_A 92 DNIGEVVDDFDDAD----EREESVAHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYTLFDHRS---PA------ 158 (320)
T ss_dssp CCCSCCCCTTCCCC----C--CCSTTSHHHHHHHHHHHHHCCCCCSSCCCTTCEEEEECCBTTTBCSSS---CC------
T ss_pred CcCCcccccCCCcc----cchhhhhhhhhhHHHHHHHHHhcCCCcCCCCcCCCcEEEEeccccEEcccc---cC------
Confidence 34456666666521 2222224444444444432 33345679999999 6542 11
Q ss_pred ccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc--eeecC---------C
Q psy8912 408 QVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK--EIFPG---------Q 476 (538)
Q Consensus 408 ~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~--~i~~~---------~ 476 (538)
.+..+...||+.+||+++. ++|.++|.|++. +.+|.++++.++...++++. .+..+ .
T Consensus 159 ----------~~~~~~~RP~l~eFL~~l~-~~yeivIfTas~-~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~ 226 (320)
T 3shq_A 159 ----------ETGTELMRPYLHEFLTSAY-EDYDIVIWSATS-MRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPE 226 (320)
T ss_dssp ----------SSHHHHBCTTHHHHHHHHH-HHEEEEEECSSC-HHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETT
T ss_pred ----------CCcceEeCCCHHHHHHHHH-hCCEEEEEcCCc-HHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccC
Confidence 0112568899999999999 559999999997 45999999999987764310 11111 1
Q ss_pred chHHHHHHHHHh-----CCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 477 KTTHFANLKKAT-----GIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 477 k~~~~~kal~~l-----gi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
....|.|-++.+ |.+++++|+|||+...+......|+.+...
T Consensus 227 ~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~ 273 (320)
T 3shq_A 227 RGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPF 273 (320)
T ss_dssp TEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECCCC
T ss_pred CCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeCeE
Confidence 122467778888 999999999999999988877788776544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.74 E-value=1.4e-05 Score=80.05 Aligned_cols=201 Identities=12% Similarity=0.097 Sum_probs=105.1
Q ss_pred cccccccccccccc----ccc-hHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc----------ccccCc
Q psy8912 301 KDRVEDAKGTLLNL----YRD-IPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY----------KEIFPA 365 (538)
Q Consensus 301 ~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 365 (538)
|--+-|=+|||.+= -+. ..+.++.|+++|+..++||=-+. ..+..++..+++..++++ +.+|..
T Consensus 38 Kli~fDlDGTLld~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~-~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~ 116 (304)
T 3l7y_A 38 KVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPY-RQLREHFPDCHEQLTFVGENGANIISKNQSLIEV 116 (304)
T ss_dssp SEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEEC
T ss_pred EEEEEeCCCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEe
Confidence 44578999999874 334 56788999999999999975443 345667777777555543 222221
Q ss_pred c---hhhhhh-hhcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHH-HHCC
Q psy8912 366 E---KKIKHF-ANLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYL-KQNN 439 (538)
Q Consensus 366 ~---~~~~~~-~~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~L-k~~G 439 (538)
. ..++.. +.+++. ..+ .+.+...+..-...-.+.. .... ...+...+...+. |+.+ .+..
T Consensus 117 ~l~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~----l~~~~~~~~ 182 (304)
T 3l7y_A 117 FQQREDIASIIYFIEEKYPQA---VIALSGEKKGYLKKGVSEN------IVKM-LSPFFPVLELVNS----FSPLPDERF 182 (304)
T ss_dssp CCCHHHHHHHHHHHHHHCTTS---EEEEEESSCEEEETTSCHH------HHHH-HTTSCSSEEEESC----CSSCC-CCE
T ss_pred cCCHHHHHHHHHHHHHhcCCe---EEEEEcCCCEeeeCCCCHH------HHHH-HHHHhccceecCC----HHHcCcCCe
Confidence 1 011111 111110 111 1333333310000000000 0000 0011111111111 1122 3444
Q ss_pred ceEEEEeCCCchHHHHHHHhhcC--Ccc-ccc-------cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHh
Q psy8912 440 CLVAAASRTTEMLRAHQLVDLFN--WNQ-HFD-------HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHD 507 (538)
Q Consensus 440 iklaIASss~~~~~a~~~L~~lg--L~~-yFd-------~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~a 507 (538)
+++.+.+.. . ....+++.+. +.+ +|. ..++.+. +|...+.++++++|++|++|++|||+.||++.
T Consensus 183 ~ki~~~~~~--~-~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m 259 (304)
T 3l7y_A 183 FKLTLQVKE--E-ESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEM 259 (304)
T ss_dssp EEEEEECCG--G-GHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH
T ss_pred EEEEEEcCH--H-HHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHH
Confidence 567666633 2 2344444432 323 232 2233333 67888999999999999999999999999999
Q ss_pred HcccCCEEEEECC
Q psy8912 508 VSPLGVTCIHVKD 520 (538)
Q Consensus 508 Ak~aGi~~i~V~d 520 (538)
++.||+. +++.+
T Consensus 260 ~~~ag~~-vam~n 271 (304)
T 3l7y_A 260 LKLAKYS-YAMAN 271 (304)
T ss_dssp HHHCTEE-EECTT
T ss_pred HHhcCCe-EEcCC
Confidence 9999954 44444
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=8.2e-05 Score=81.09 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=79.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc-C-------------CccccccceeecCCchHH-------
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-N-------------WNQHFDHKEIFPGQKTTH------- 480 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l-g-------------L~~yFd~~~i~~~~k~~~------- 480 (538)
+..-|.+..+|+.||+.| ++.++|+|+. +.+..+++.+ | +.+|||. .|....||..
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~-~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~-vI~~A~KP~FF~~~~pf 321 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDY-KYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDL-ILVDARKPLFFGEGTVL 321 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCH-HHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSE-EEESCCTTGGGTTCCCE
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCCh-HHHHHHHHHhcCCCccccccccccchhhhCCE-EEEeCCCCCcccCCCcc
Confidence 444578999999999999 9999999874 5888888887 6 5689994 2444455442
Q ss_pred -----------------------------HHHHHHHhCCCCCcEEEEecccc-cHHhHc-ccCCEEEEECCCCC
Q psy8912 481 -----------------------------FANLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKDGMS 523 (538)
Q Consensus 481 -----------------------------~~kal~~lgi~pee~l~~eDs~~-~I~aAk-~aGi~~i~V~dg~t 523 (538)
+..+++.+|+++++++||||... ||..++ .+|..+++|-.-+.
T Consensus 322 r~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPELe 395 (555)
T 2jc9_A 322 RQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELA 395 (555)
T ss_dssp EEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTHH
T ss_pred eEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEechh
Confidence 37788889999999999999976 588887 79999999988543
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.65 E-value=7.8e-05 Score=73.34 Aligned_cols=108 Identities=8% Similarity=0.073 Sum_probs=71.5
Q ss_pred hhhCCceEEEEcCCCcHHHHHHHHHHcC--CCCCCcce-------eecC--CCCHHHHHHHHHHcCCCCCcEEEEeCCcc
Q psy8912 67 LKENKCLVAAASRTSEILHAKQILNLIN--LNQYFSNK-------EIYP--GQKTTHFESLKKATGIEYKDMVFFDDEER 135 (538)
Q Consensus 67 Lk~~GikiaIvTn~~~p~~~~~~L~~lg--L~~~Fd~i-------e~~~--~~Kp~~f~~ale~lgi~P~e~L~IGDs~~ 135 (538)
+++.+++++++|+... ....++.++ +...|+.+ ++.+ .+|+..++.+++++|+++++|++|||+.+
T Consensus 142 ~~~~~~ki~i~~~~~~---~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~n 218 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDEQ---IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN 218 (271)
T ss_dssp CCSCEEEEEEECCGGG---HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred CCCceEEEEEEcCHHH---HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHH
Confidence 3456788888887643 444444433 33444432 3333 36789999999999999999999999999
Q ss_pred cHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC-chhhHHhhhh
Q psy8912 136 NSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD-EQEHVNDISK 185 (538)
Q Consensus 136 DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~-~~~~~~~i~~ 185 (538)
|+.+++.+|+. +.+.++ .... +. .+++++.+. .+.+...+.+
T Consensus 219 D~~m~~~ag~~-va~~na--~~~~-k~----~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 219 DAEMLKMARYS-FAMGNA--AENI-KQ----IARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp GHHHHHHCSEE-EECTTC--CHHH-HH----HCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHHcCCe-EEeCCc--cHHH-HH----hCCeeCcCCCCChHHHHHHH
Confidence 99999999995 445443 2332 22 367777653 3444444544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00014 Score=82.43 Aligned_cols=104 Identities=14% Similarity=0.179 Sum_probs=81.1
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
++.|++.+.++.|+++|++++++|+.+. ..+..+.+.+|+..+|.. ..|..|....+.+.+ . ++++||||+.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~-~~a~~ia~~lgi~~~~~~--~~P~~K~~~v~~l~~----~-~~v~~vGDg~ 606 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIAE--VLPHQKSEEVKKLQA----K-EVVAFVGDGI 606 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECS--CCTTCHHHHHHHHTT----T-CCEEEEECSS
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCcEEEcc--CCHHHHHHHHHHHhc----C-CeEEEEECCh
Confidence 4679999999999999999999999988 999999999999876665 455566666555533 3 7899999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+|+.+.+.+|+. |.+..|.. .....+|++..+
T Consensus 607 ND~~al~~A~vg-iamg~g~~-------~a~~~AD~vl~~ 638 (723)
T 3j09_A 607 NDAPALAQADLG-IAVGSGSD-------VAVESGDIVLIR 638 (723)
T ss_dssp TTHHHHHHSSEE-EECCCCSC-------CSSCCSSEECSS
T ss_pred hhHHHHhhCCEE-EEeCCCcH-------HHHHhCCEEEeC
Confidence 999999999963 44443331 234567888854
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.58 E-value=5.1e-05 Score=66.97 Aligned_cols=51 Identities=22% Similarity=0.094 Sum_probs=39.2
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
+|+|+||+||||++..-.. .....+.|++.++|+.|+++|++++++|+++.
T Consensus 1 ik~i~~DlDGTL~~~~~~~----------------~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSD----------------YRNVLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CCEEEECSTTTTBCCCCSC----------------GGGCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCEEEEecCCCCCCCCCCc----------------cccCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 5799999999998621000 00135678899999999999999999999865
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=72.43 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=42.2
Q ss_pred CchHHHHHHHHHhC-CCCCc--EEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 476 QKTTHFANLKKATG-IEYKD--MVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 476 ~k~~~~~kal~~lg-i~pee--~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|...+.++++.+| +++++ +++|||+.+|+...+.+|. .++|.++.
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~ 237 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKGLN 237 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCCCC
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCc-eEEecCCC
Confidence 78888999999999 99999 9999999999999999998 48888875
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00016 Score=80.86 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=72.3
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-.++|++.+.+++|+++|+++.++|..+ +..++.+.+.+|+..+|. ...+.+|..... +++-. +++++|||.
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~-~~~a~~ia~~lgi~~~~~--~~~P~~K~~~v~----~l~~~-~~v~~vGDg 527 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIA--EVLPHQKSEEVK----KLQAK-EVVAFVGDG 527 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEEC--SCCTTCHHHHHH----HHTTT-CCEEEEECS
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCCEEEE--eCCHHhHHHHHH----HHhhC-CeEEEEeCC
Confidence 4589999999999999999999999876 458999999999998887 445556655444 34434 899999999
Q ss_pred cccHHhHcccCCEEEEECC
Q psy8912 502 ERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~d 520 (538)
.||+.+.++||+- |++.+
T Consensus 528 ~ND~~al~~A~vg-iamg~ 545 (645)
T 3j08_A 528 INDAPALAQADLG-IAVGS 545 (645)
T ss_dssp SSCHHHHHHSSEE-EEECC
T ss_pred HhHHHHHHhCCEE-EEeCC
Confidence 9999999999943 44444
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0006 Score=66.90 Aligned_cols=49 Identities=20% Similarity=0.388 Sum_probs=41.3
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.+. +|+..+..+++++|++|++|++|||+.+|+..++.+|+. +++.+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~-v~~~n 233 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMEN 233 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCE-EEecC
Confidence 44443 788889999999999999999999999999999999984 34443
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00024 Score=76.39 Aligned_cols=96 Identities=10% Similarity=0.045 Sum_probs=77.1
Q ss_pred cCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---------CCCCCCcceeecCCCCHHH--------------
Q psy8912 56 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPGQKTTH-------------- 112 (538)
Q Consensus 56 l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---------gL~~~Fd~ie~~~~~Kp~~-------------- 112 (538)
.-|.+..+|+.|+++|.++.++||++- ..+...+..+ .|.++||.| +....||..
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~M~y~~~~~~~~g~dWrdlFDvV-Iv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFEFV-ITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHTGGGSCTTCCGGGGCSEE-EESCCTTHHHHSCCCEEEECTTT
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeCCCc-hHHHHHHHhhcccCCCCCCChhhhcCEE-EECCCCCCcccCCCcceEEECCC
Confidence 347788999999999999999999988 8888888764 467899976 344445543
Q ss_pred -------------------HHHHHHHcCCCCCcEEEEeCCcc-cHHHHhh-cCCeEEEECCC
Q psy8912 113 -------------------FESLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHSWLM 153 (538)
Q Consensus 113 -------------------f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~-aG~~tI~V~~G 153 (538)
.....+.+|....+++||||+.. ||..++. .|++|++|..-
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 45667788999999999999975 9877776 69999999653
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00016 Score=72.39 Aligned_cols=114 Identities=11% Similarity=0.013 Sum_probs=76.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc----------ccc---------ceeecCCchHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH----------FDH---------KEIFPGQKTTHF 481 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y----------Fd~---------~~i~~~~k~~~~ 481 (538)
.+++.||+.+++++|+++|+++.++|... ...++.+++.+|+... |+. ..+....+....
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~-~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEE-HHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 58899999999999999999999999876 4599999999997532 110 001111333333
Q ss_pred HHH--HHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHH
Q psy8912 482 ANL--KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 535 (538)
Q Consensus 482 ~ka--l~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~ 535 (538)
.+. ..++.-..++++++||+.||+.+++.+...-+++.-|+.....+.++..|.
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~ 273 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYM 273 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHH
Confidence 332 233555678899999999999998865444445555544344455555443
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00012 Score=73.62 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=40.9
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|...+..+++.+|+++++|++|||+.+|+..++.+|+. +++.++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na 268 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA 268 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC
Confidence 788899999999999999999999999999999999985 567664
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00069 Score=68.09 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=41.2
Q ss_pred cccccccccccccc-----ccchHHHHHHhhhcCcceeeeccccccchhhhHH--hhhC-CC
Q psy8912 301 KDRVEDAKGTLLNL-----YRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLL--HLLG-LS 354 (538)
Q Consensus 301 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~ 354 (538)
|--+-|=+|||++- -+...+.++.|+++|+..++||=.+ +..+..++ ..|+ +.
T Consensus 28 kli~~DlDGTLl~~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~-~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 28 KLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRS-KVGILSAFGEENLKKMN 88 (301)
T ss_dssp CEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEECSSC-HHHHHHHHCHHHHHHHT
T ss_pred cEEEEECCCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHhhHHhhcccc
Confidence 34567999999863 3467888999999999999998443 45678888 8888 76
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00079 Score=76.39 Aligned_cols=112 Identities=7% Similarity=0.021 Sum_probs=80.5
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
++-|++.+.++.|+++|++++++|+.+. ..+..+.+.+|+.++|.. ..|+--..+++++.-..+.++||||+.
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~-~~a~~ia~~lgi~~v~a~------~~P~~K~~~v~~l~~~g~~V~~vGDG~ 626 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSK-RTAEAVAGTLGIKKVVAE------IMPEDKSRIVSELKDKGLIVAMAGDGV 626 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHHHTCCCEECS------CCHHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCEEEEe------cCHHHHHHHHHHHHhcCCEEEEEECCh
Confidence 4569999999999999999999999988 999999999998765554 234333333333333467899999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHH
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVN 181 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~ 181 (538)
+|+.+-+.+|+. |.+..|.. ... ..+|++..+ +...+..
T Consensus 627 ND~paL~~AdvG-IAmg~g~d--~a~-----~~AD~vl~~~~~~~i~~ 666 (736)
T 3rfu_A 627 NDAPALAKADIG-IAMGTGTD--VAI-----ESAGVTLLHGDLRGIAK 666 (736)
T ss_dssp TTHHHHHHSSEE-EEESSSCS--HHH-----HHCSEEECSCCSTTHHH
T ss_pred HhHHHHHhCCEE-EEeCCccH--HHH-----HhCCEEEccCCHHHHHH
Confidence 999999999974 55655432 222 236788755 3333433
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.21 E-value=7.8e-05 Score=76.57 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=81.5
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
-+++|+|+||||....... ....+...||+.+||+.|.+ .+.++|.|++.. .++..+++.++.
T Consensus 140 k~tLVLDLDeTLvh~~~~~---------------~~~~~~~RP~l~eFL~~l~~-~yeivIfTas~~-~ya~~vld~Ld~ 202 (320)
T 3shq_A 140 KKLLVLDIDYTLFDHRSPA---------------ETGTELMRPYLHEFLTSAYE-DYDIVIWSATSM-RWIEEKMRLLGV 202 (320)
T ss_dssp CEEEEECCBTTTBCSSSCC---------------SSHHHHBCTTHHHHHHHHHH-HEEEEEECSSCH-HHHHHHHHHTTC
T ss_pred CcEEEEeccccEEcccccC---------------CCcceEeCCCHHHHHHHHHh-CCEEEEEcCCcH-HHHHHHHHHhCC
Confidence 4799999999996522100 01134577999999999995 599999999988 999999999987
Q ss_pred CCCCcc--e---ee---cC---CCCHHHHHHHHHHc-----CCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 96 NQYFSN--K---EI---YP---GQKTTHFESLKKAT-----GIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 96 ~~~Fd~--i---e~---~~---~~Kp~~f~~ale~l-----gi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
...++. . +. .. ......|.+-++.+ |.+++++++|+|++.........|+.
T Consensus 203 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 203 ASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp TTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred CCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEE
Confidence 655321 1 11 00 01112355556666 88999999999999987777777766
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00034 Score=68.46 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=38.7
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
+|+|+||+||||.+. ...+-+.+.++|++|+++|++++++|+++.
T Consensus 4 ~kli~~DlDGTLl~~----------------------~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~ 48 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPP----------------------RLCQTDEMRALIKRARGAGFCVGTVGGSDF 48 (246)
T ss_dssp SEEEEECSBTTTBST----------------------TSCCCHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred ceEEEEeCcCCcCCC----------------------CCccCHHHHHHHHHHHHCCCEEEEECCCCH
Confidence 799999999999862 224557789999999999999999999976
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00078 Score=76.26 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=71.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-.++|++.+.+++|+++|+++.++|.-+ +..++.+.+.+|+..+|. ...+.+|...... ++-. +++++|||.
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~-~~~a~~ia~~lgi~~~~~--~~~P~~K~~~v~~----l~~~-~~v~~vGDg 605 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIA--EVLPHQKSEEVKK----LQAK-EVVAFVGDG 605 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEEC--SCCTTCHHHHHHH----HTTT-CCEEEEECS
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCcEEEc--cCCHHHHHHHHHH----HhcC-CeEEEEECC
Confidence 4589999999999999999999999876 458899999999998876 4455566555443 3333 889999999
Q ss_pred cccHHhHcccCCEEEEECC
Q psy8912 502 ERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~d 520 (538)
.||+.+.++||+- |++.+
T Consensus 606 ~ND~~al~~A~vg-iamg~ 623 (723)
T 3j09_A 606 INDAPALAQADLG-IAVGS 623 (723)
T ss_dssp STTHHHHHHSSEE-EECCC
T ss_pred hhhHHHHhhCCEE-EEeCC
Confidence 9999999999953 34433
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0014 Score=76.83 Aligned_cols=112 Identities=10% Similarity=-0.003 Sum_probs=76.9
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc----e---------------------eecCCCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN----K---------------------EIYPGQK 109 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~----i---------------------e~~~~~K 109 (538)
++.|++.++++.|+++|++++++|+... ..+..+.+.+|+...... + .++....
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~-~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 4679999999999999999999999977 999999999998654321 0 0112222
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 110 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 110 p~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+.-..+++.+.-..+.++|+||+.+|+.|.+++++. |.+..|. ... + ..+|+++.++
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advg-iamg~g~--~~a-k----~aAd~vl~~~ 739 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG-IAMGSGT--AVA-K----TASEMVLADD 739 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEE-EEETTSC--HHH-H----HTCSEEETTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeE-EEeCCCC--HHH-H----HhCCEEECCC
Confidence 3222223333333357899999999999999999985 4454333 221 1 2478888654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0011 Score=65.38 Aligned_cols=56 Identities=23% Similarity=0.281 Sum_probs=43.8
Q ss_pred ccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCc-cccc
Q psy8912 303 RVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSD-FFDY 359 (538)
Q Consensus 303 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 359 (538)
=+-|=+|||++ +.+...+.++.|+++|+..++||=.+ +..+..++..|++.. ++++
T Consensus 12 i~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~~~~~I~ 72 (275)
T 1xvi_A 12 VFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKT-SAEMLYLQKTLGLQGLPLIA 72 (275)
T ss_dssp EEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHHTTCTTSCEEE
T ss_pred EEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCCCCCeEEE
Confidence 45688899886 45778999999999999999998443 346788899999875 4443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00059 Score=69.36 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=65.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee----------------------cCC---
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF----------------------PGQ--- 476 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~----------------------~~~--- 476 (538)
..++|++.++|+.|++ |++++++|++.. .++...++.+++.+++...... ...
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYT-QYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEH-HHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCce-EEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 4679999999999999 999999997753 3666677777774433110000 000
Q ss_pred ------------chHHHH----------HHHHHhCCCCCc----EEEEecccccHHhHccc----CCEEEEECCC
Q psy8912 477 ------------KTTHFA----------NLKKATGIEYKD----MVFFDDEERNSHDVSPL----GVTCIHVKDG 521 (538)
Q Consensus 477 ------------k~~~~~----------kal~~lgi~pee----~l~~eDs~~~I~aAk~a----Gi~~i~V~dg 521 (538)
++..+. |+..-.|+++++ |++|||+.+|+.+++.| |+. |+| ++
T Consensus 180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~-vam-na 252 (332)
T 1y8a_A 180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVA-IAF-NG 252 (332)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEE-EEE-SC
T ss_pred HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeE-EEe-cC
Confidence 011232 222223788999 99999999999999999 996 456 54
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0028 Score=71.90 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=71.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-.+.|++.+.+++|+++|+++.++|.-+ +..++.+.+.+|+.++|. ...+.+|.+.. ++++-..+.++++||.
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~-~~~a~~ia~~lgi~~v~a--~~~P~~K~~~v----~~l~~~g~~V~~vGDG 625 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDS-KRTAEAVAGTLGIKKVVA--EIMPEDKSRIV----SELKDKGLIVAMAGDG 625 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSC-HHHHHHHHHHHTCCCEEC--SCCHHHHHHHH----HHHHHHSCCEEEEECS
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCEEEE--ecCHHHHHHHH----HHHHhcCCEEEEEECC
Confidence 3588999999999999999999999876 458899999999988776 23333444333 3333346789999999
Q ss_pred cccHHhHcccCCEEEEECCCC
Q psy8912 502 ERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~dg~ 522 (538)
.||+.+-++||+- |++.+|.
T Consensus 626 ~ND~paL~~AdvG-IAmg~g~ 645 (736)
T 3rfu_A 626 VNDAPALAKADIG-IAMGTGT 645 (736)
T ss_dssp STTHHHHHHSSEE-EEESSSC
T ss_pred hHhHHHHHhCCEE-EEeCCcc
Confidence 9999999999954 4555543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.00087 Score=70.38 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=62.6
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC------------c--ce---eecC-------CCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF------------S--NK---EIYP-------GQK 109 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F------------d--~i---e~~~-------~~K 109 (538)
++++|++.++++.|+++|++++|+|++.. ..++.+.+.+|+..-. + .. ...+ ..|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~-~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK 298 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFI-DIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGK 298 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHH
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCch
Confidence 45899999999999999999999999988 9999999988753111 0 00 0000 114
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhc
Q psy8912 110 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 110 p~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~a 143 (538)
+..+...++. ......++++||+.+|+.+.+..
T Consensus 299 ~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~ 331 (385)
T 4gxt_A 299 VQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEF 331 (385)
T ss_dssp HHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHC
T ss_pred HHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcC
Confidence 4445444332 23446689999999999999874
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.00095 Score=64.66 Aligned_cols=55 Identities=18% Similarity=0.140 Sum_probs=39.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQI 89 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~ 89 (538)
+|+|+||+||||.+..- ......+-|.+.++|++|+++| +++++|+++. ..+...
T Consensus 1 ikli~~DlDGTLl~~~~-----------------~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~-~~~~~~ 55 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIM-----------------NPEESYADAGLLSLISDLKERF-DTYIVTGRSP-EEISRF 55 (239)
T ss_dssp -CEEEEECBTTTBCCCS-----------------CGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCH-HHHHHH
T ss_pred CeEEEEecCCCCcCCCC-----------------CcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCH-HHHHHH
Confidence 57899999999985100 0012345677899999999999 9999999976 444443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0069 Score=70.89 Aligned_cols=98 Identities=7% Similarity=0.003 Sum_probs=71.5
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc---c----------------------eeecCC
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH---K----------------------EIFPGQ 476 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~---~----------------------~i~~~~ 476 (538)
-+++||+.+.++.|++.|+++.++|.-+ +..+..+.+.+||..+.+. . .++..-
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~-~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDN-KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCC-HHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 3589999999999999999999999876 5589999999999765321 0 112221
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.|+.-.++++.++-..+.++++||..||+.+.++|++-+. +..|
T Consensus 681 ~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia-mg~g 724 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA-MGSG 724 (995)
T ss_dssp CSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE-ETTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE-eCCC
Confidence 2333344445554446889999999999999999998544 4444
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0013 Score=69.04 Aligned_cols=106 Identities=12% Similarity=-0.045 Sum_probs=69.5
Q ss_pred hhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc------c------cc--cce---ee-----
Q psy8912 416 DAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ------H------FD--HKE---IF----- 473 (538)
Q Consensus 416 d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~------y------Fd--~~~---i~----- 473 (538)
..+...++++||+.+++++|+++|+++.|+|++.. +.++.+.+.+|+.- . |+ ... ..
T Consensus 214 ~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~-~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~ 292 (385)
T 4gxt_A 214 IKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFI-DIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPI 292 (385)
T ss_dssp EEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCC
T ss_pred EeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccce
Confidence 33455688999999999999999999999999975 59999999887631 1 11 000 00
Q ss_pred --cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc-cCCEEEEECCCCC
Q psy8912 474 --PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP-LGVTCIHVKDGMS 523 (538)
Q Consensus 474 --~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~-aGi~~i~V~dg~t 523 (538)
...|+..+.+.+++ ......++++||+.+|+..-++ .+..+..+-+...
T Consensus 293 ~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr~~ 344 (385)
T 4gxt_A 293 SIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHRAN 344 (385)
T ss_dssp CSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCTTCSEEEEECCSC
T ss_pred eCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCccCceEEEEcCCc
Confidence 01244445444322 2344568999999999888876 3333333334433
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0035 Score=60.49 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=33.7
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEec----ccccHHhHcccCCEEEEECC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eD----s~~~I~aAk~aGi~~i~V~d 520 (538)
+|..-+.++ +|++++++++||| +.||++.-+.+|...++|.+
T Consensus 188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 566665555 8999999999999 99999999999987777765
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0034 Score=61.39 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=36.4
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEec----ccccHHhHcccCCEEEEECC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eD----s~~~I~aAk~aGi~~i~V~d 520 (538)
+|..-+.++ +|++++++++||| +.||++.-+.+|...++|.+
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N 242 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 242 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC
Confidence 677776666 9999999999999 99999999999988888833
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0052 Score=63.12 Aligned_cols=38 Identities=21% Similarity=0.164 Sum_probs=34.6
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
..+||++.++++.|+++|+.++|||.+.. ..++.+.+.
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~-~~v~~~a~~ 179 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHE-ELVRMVAAD 179 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhh
Confidence 36899999999999999999999999988 888888776
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0047 Score=71.69 Aligned_cols=109 Identities=10% Similarity=0.059 Sum_probs=75.9
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cc------------------------e--eecCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SN------------------------K--EIYPG 107 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~------------------------i--e~~~~ 107 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+.... +. + ...|.
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~-~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAV-GIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCH-HHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCH-HHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 4668999999999999999999999977 9999999999985311 00 0 11222
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
.|....+. +++.| +.+.|+||+.+|..|-+++++. |.+..|. .... ..+|+|..++.
T Consensus 614 ~K~~iV~~-Lq~~g---~~Vam~GDGvNDapaLk~AdvG-IAmg~gt--d~ak-----~aADiVl~~~~ 670 (920)
T 1mhs_A 614 HKYNVVEI-LQQRG---YLVAMTGDGVNDAPSLKKADTG-IAVEGSS--DAAR-----SAADIVFLAPG 670 (920)
T ss_dssp HHHHHHHH-HHTTT---CCCEECCCCGGGHHHHHHSSEE-EEETTSC--HHHH-----HSSSEEESSCC
T ss_pred HHHHHHHH-HHhCC---CeEEEEcCCcccHHHHHhCCcC-ccccccc--HHHH-----HhcCeEEcCCC
Confidence 23333333 34434 6899999999999999999985 4565432 2221 24788886643
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=95.98 E-value=0.03 Score=65.84 Aligned_cols=109 Identities=14% Similarity=0.083 Sum_probs=76.2
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC------------------------cce--------
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF------------------------SNK-------- 102 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F------------------------d~i-------- 102 (538)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+...- ..+
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 4569999999999999999999999977 8999999999986210 000
Q ss_pred ---------------eecCCCCHHH---HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhh
Q psy8912 103 ---------------EIYPGQKTTH---FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEAT 163 (538)
Q Consensus 103 ---------------e~~~~~Kp~~---f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l 163 (538)
.++....|+. +.+.+++.| +.++++||+.+|+.|-+.+++. |.+. .|. +...+
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g---~~V~~iGDG~ND~paLk~AdvG-IAmg~~gt--d~ak~-- 749 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIG-VAMGISGS--DVSKQ-- 749 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEE-EEESSSCC--HHHHH--
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC---CEEEEEcCCcchHHHHHhCCce-EEeCCccC--HHHHH--
Confidence 1233444533 333444443 6799999999999999999986 3454 343 22211
Q ss_pred CCCCCCEEEeCC
Q psy8912 164 GIDYKDMIYFDD 175 (538)
Q Consensus 164 ~~~~~d~Ii~d~ 175 (538)
.+|+|..++
T Consensus 750 ---aAD~Vl~~~ 758 (1028)
T 2zxe_A 750 ---AADMILLDD 758 (1028)
T ss_dssp ---HCSEEETTC
T ss_pred ---hcCEEecCC
Confidence 368888664
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.031 Score=59.98 Aligned_cols=99 Identities=12% Similarity=0.156 Sum_probs=76.2
Q ss_pred CCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc---------CCccccccceeecCCchHH---------------
Q psy8912 425 YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---------NWNQHFDHKEIFPGQKTTH--------------- 480 (538)
Q Consensus 425 ~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l---------gL~~yFd~~~i~~~~k~~~--------------- 480 (538)
-|.+..+|+.||+.|-++-++|+|+- +.+..+++.+ .+.+|||. .|....||.-
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~M~y~~~~~~~~g~dWrdlFDv-VIv~A~KP~FF~~~~~~~~v~~~~g 265 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFEF-VITLANKPRFFYDNLRFLSVNPENG 265 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHTGGGSCTTCCGGGGCSE-EEESCCTTHHHHSCCCEEEECTTTC
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCc-hHHHHHHHhhcccCCCCCCChhhhcCE-EEECCCCCCcccCCCcceEEECCCC
Confidence 47889999999999999999999974 4777776652 57789994 3344444443
Q ss_pred ------------------HHHHHHHhCCCCCcEEEEeccccc-HHhHcc-cCCEEEEECCCCCHH
Q psy8912 481 ------------------FANLKKATGIEYKDMVFFDDEERN-SHDVSP-LGVTCIHVKDGMSHS 525 (538)
Q Consensus 481 ------------------~~kal~~lgi~pee~l~~eDs~~~-I~aAk~-aGi~~i~V~dg~t~~ 525 (538)
.....+.+|..-.+++||||..++ |-.+++ .|-.+++|-..+..+
T Consensus 266 ~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL~~E 330 (470)
T 4g63_A 266 TMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELGEE 330 (470)
T ss_dssp CEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTHHHH
T ss_pred cccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHHHHH
Confidence 355566689999999999999765 666665 899999998876554
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.0046 Score=65.96 Aligned_cols=82 Identities=11% Similarity=0.122 Sum_probs=63.0
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc-ccccceeecCCc-hHHHHHHHHHh-CCCCCcEE
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQK-TTHFANLKKAT-GIEYKDMV 496 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~-yFd~~~i~~~~k-~~~~~kal~~l-gi~pee~l 496 (538)
.-+.+.||+.+||++|. ++|.+.|.|++.. .+|.++++.++... ||.. -+++.+. ...|.|-+.++ |.+.+.+|
T Consensus 80 ~~V~~RPgl~eFL~~ls-~~yEivIfTas~~-~YA~~Vl~~LDp~~~~f~~-Rl~sRd~cg~~~~KdL~~ll~rdl~~vv 156 (442)
T 3ef1_A 80 YYIKFRPGLAQFLQKIS-ELYELHIYTMGTK-AYAKEVAKIIDPTGKLFQD-RVLSRDDSGSLAQKSLRRLFPCDTSMVV 156 (442)
T ss_dssp EEEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHHHHHHHCTTSTTTTT-CEECTTTSSCSSCCCGGGTCSSCCTTEE
T ss_pred EEEEeCCCHHHHHHHHh-CCcEEEEEcCCCH-HHHHHHHHHhccCCccccc-eEEEecCCCCceeeehHHhcCCCcceEE
Confidence 44788999999999998 6799999999975 59999999999887 7873 2332221 11244455554 88999999
Q ss_pred EEeccccc
Q psy8912 497 FFDDEERN 504 (538)
Q Consensus 497 ~~eDs~~~ 504 (538)
+|||+..-
T Consensus 157 IIDd~p~~ 164 (442)
T 3ef1_A 157 VIDDRGDV 164 (442)
T ss_dssp EEESCSGG
T ss_pred EEECCHHH
Confidence 99999854
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.049 Score=64.00 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=77.7
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc------------------------ce--------
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS------------------------NK-------- 102 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd------------------------~i-------- 102 (538)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+.+|+...-. .+
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~-~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHP-ITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 4678999999999999999999999977 88999999999842100 00
Q ss_pred ---------------eecCCCCHHH---HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhh
Q psy8912 103 ---------------EIYPGQKTTH---FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEAT 163 (538)
Q Consensus 103 ---------------e~~~~~Kp~~---f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l 163 (538)
..+....|+. +.+.+++.| ..++++||+.+|+.|-+.||+. |++. .|. +...
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g---~~V~a~GDG~ND~~mLk~A~vG-IAMg~ng~--d~aK--- 753 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLG---AIVAVTGDGVNDSPALKKADIG-VAMGIAGS--DAAK--- 753 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcC---CEEEEECCcHHhHHHHHHCCee-EEeCCccC--HHHH---
Confidence 0112223422 233344433 5699999999999999999985 4443 332 2221
Q ss_pred CCCCCCEEEeCC-chhhHHhhh
Q psy8912 164 GIDYKDMIYFDD-EQEHVNDIS 184 (538)
Q Consensus 164 ~~~~~d~Ii~d~-~~~~~~~i~ 184 (538)
..+|+|..+. ...++..+.
T Consensus 754 --~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 754 --NAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred --HhcCEEeccCCchHHHHHHH
Confidence 2568888663 444444444
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.0098 Score=63.42 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=65.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC-CCcceeecCCCCHHHHHHHHHH-cCCCCCcEEE
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ-YFSNKEIYPGQKTTHFESLKKA-TGIEYKDMVF 129 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~-~Fd~ie~~~~~Kp~~f~~ale~-lgi~P~e~L~ 129 (538)
..+...||+.+||+.|. ..+.++|.|.+.. .++..+++.++-.. +|...-.....-...|.+-+.+ +|.+.+.+++
T Consensus 80 ~~V~~RPgl~eFL~~ls-~~yEivIfTas~~-~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~~~KdL~~ll~rdl~~vvI 157 (442)
T 3ef1_A 80 YYIKFRPGLAQFLQKIS-ELYELHIYTMGTK-AYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVV 157 (442)
T ss_dssp EEEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHHHHHHHCTTSTTTTTCEECTTTSSCSSCCCGGGTCSSCCTTEEE
T ss_pred EEEEeCCCHHHHHHHHh-CCcEEEEEcCCCH-HHHHHHHHHhccCCccccceEEEecCCCCceeeehHHhcCCCcceEEE
Confidence 34667799999999999 5699999999988 99999999998776 7876311111001112233443 4889999999
Q ss_pred EeCCcccHHHHhhcCCeEEEEC
Q psy8912 130 FDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 130 IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
|+|++.-.. ... .+|.|.
T Consensus 158 IDd~p~~~~---~~p-N~I~I~ 175 (442)
T 3ef1_A 158 IDDRGDVWD---WNP-NLIKVV 175 (442)
T ss_dssp EESCSGGGT---TCT-TEEECC
T ss_pred EECCHHHhC---CCC-CEEEcC
Confidence 999985322 113 566665
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.024 Score=54.69 Aligned_cols=45 Identities=11% Similarity=0.102 Sum_probs=40.0
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|...+.++++++|++++++++|||+.+|+..++.+|+. +++.++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na 206 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNA 206 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcCC
Confidence 788899999999999999999999999999999999874 566543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.12 Score=60.71 Aligned_cols=91 Identities=10% Similarity=0.045 Sum_probs=66.9
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc------------------------c---------
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF------------------------D--------- 468 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF------------------------d--------- 468 (538)
-+++|++.+.++.|++.|+++.++|.-+ +..+..+.+.+||...= .
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDH-PITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCC-HHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 4589999999999999999999999775 55889899999986310 0
Q ss_pred -------------c-ceeecCCchHH---HHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 469 -------------H-KEIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 469 -------------~-~~i~~~~k~~~---~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
. ..+.....|+. +.+.+++.| +.++++||..||+.+-++|++-+.
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g---~~V~~iGDG~ND~paLk~AdvGIA 738 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIGVA 738 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEEEE
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC---CEEEEEcCCcchHHHHHhCCceEE
Confidence 0 01233333443 334444443 679999999999999999998764
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.03 E-value=0.015 Score=67.23 Aligned_cols=88 Identities=8% Similarity=0.024 Sum_probs=64.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-C--------------cce---------eecCCCCH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-F--------------SNK---------EIYPGQKT 110 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-F--------------d~i---------e~~~~~Kp 110 (538)
++.|++.+.++.|++.|+++.++|+-.. ..+..+.+.+|+... + +.. .++....|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~-~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCH-HHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCCh-HHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 3568999999999999999999999977 899999999998431 1 000 11223334
Q ss_pred HH---HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 111 TH---FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 111 ~~---f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
+- +.+.+++.| +.+.|+||+.+|..+-+++++.
T Consensus 567 ~~K~~iV~~lq~~g---~~Vam~GDGvNDapaLk~AdvG 602 (885)
T 3b8c_A 567 EHKYEIVKKLQERK---HIVGMTGDGVNDAPALKKADIG 602 (885)
T ss_dssp HHHHHHHHHHHHTT---CCCCBCCCSSTTHHHHHHSSSC
T ss_pred HHHHHHHHHHHHCC---CeEEEEcCCchhHHHHHhCCEe
Confidence 22 333334434 6799999999999999999885
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=93.22 E-value=0.38 Score=47.36 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=66.9
Q ss_pred HHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCC---CCHHHHHHHHHHcCCCCCcEEEEeCCcccH
Q psy8912 62 EILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---QKTTHFESLKKATGIEYKDMVFFDDEERNS 137 (538)
Q Consensus 62 elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~---~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI 137 (538)
.+|....++ +..-+++|+..- ...-..+=.+|+..+|..-.++.. .|...|+.+.+++| +...-++|||+...-
T Consensus 166 k~L~~i~sr~~~vNVLVTs~qL-VPaLaK~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe 243 (274)
T 3geb_A 166 KALNLINSRPNCVNVLVTTTQL-IPALAKVLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEE 243 (274)
T ss_dssp HHHHHHHHSTTEEEEEEESSCH-HHHHHHHHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHH
T ss_pred HHHHhhccCCceeEEEEecCch-HHHHHHHHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHH
Confidence 334444433 667778888865 334444446788899986655554 36689999999998 557788899999999
Q ss_pred HHHhhcCCeEEEECCC
Q psy8912 138 HDVSPLGVTCIHSWLM 153 (538)
Q Consensus 138 ~aAk~aG~~tI~V~~G 153 (538)
+||+..+++++-+...
T Consensus 244 ~AAk~~n~PFwrI~~h 259 (274)
T 3geb_A 244 QGAKKHNMPFWRISCH 259 (274)
T ss_dssp HHHHHTTCCEEECCSH
T ss_pred HHHHHcCCCeEEeecC
Confidence 9999999999988643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=92.79 E-value=0.092 Score=50.66 Aligned_cols=48 Identities=8% Similarity=-0.158 Sum_probs=42.4
Q ss_pred cCCchHHHHHHHHHhCC-CCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 474 PGQKTTHFANLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 474 ~~~k~~~~~kal~~lgi-~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
..+|..-+.++++.+|+ +++++++|||+.||++..+.+|.. +++.++.
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~ 225 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLK 225 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCC
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCC
Confidence 34788889999999998 999999999999999999999984 7787765
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=92.34 E-value=0.32 Score=57.17 Aligned_cols=94 Identities=7% Similarity=-0.033 Sum_probs=64.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc----------------------------c----
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD----------------------------H---- 469 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd----------------------------~---- 469 (538)
-++.|++.+.++.|+++|+++.++|.-+ +..+..+.+.+|+...-. .
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDH-PITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 4689999999999999999999999776 558888999999842100 0
Q ss_pred ---------------ceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 470 ---------------KEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 470 ---------------~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
..+.....+..-..+.+.++-..+.++++||+.||+.+-+.||+-+.
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIA 743 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVA 743 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEE
Confidence 00111122333223333333334568999999999999999997553
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=92.26 E-value=0.18 Score=58.62 Aligned_cols=96 Identities=8% Similarity=0.032 Sum_probs=67.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-ccc----------------------eeecCCc
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHK----------------------EIFPGQK 477 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~----------------------~i~~~~k 477 (538)
+-+++|++.+.+++|++.|+++.++|.-+ +..|..+-+.+||.... +.. .++..-.
T Consensus 533 ~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~-~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~ 611 (920)
T 1mhs_A 533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDA-VGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVF 611 (920)
T ss_dssp CCCCCHHHHHHHHHHHHHTCEEEEEESSC-HHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCC
T ss_pred eccccccHHHHHHHHhhcCceEEEEcCCC-HHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeC
Confidence 34689999999999999999999999765 56899999999996321 100 1122212
Q ss_pred hHH---HHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 478 TTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 478 ~~~---~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|+. +.+.+++.| +.+.++||..||+.+-++|++-+. +..|
T Consensus 612 P~~K~~iV~~Lq~~g---~~Vam~GDGvNDapaLk~AdvGIA-mg~g 654 (920)
T 1mhs_A 612 PQHKYNVVEILQQRG---YLVAMTGDGVNDAPSLKKADTGIA-VEGS 654 (920)
T ss_dssp STHHHHHHHHHHTTT---CCCEECCCCGGGHHHHHHSSEEEE-ETTS
T ss_pred HHHHHHHHHHHHhCC---CeEEEEcCCcccHHHHHhCCcCcc-cccc
Confidence 222 333344433 789999999999999999987554 4444
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=91.83 E-value=0.23 Score=44.81 Aligned_cols=56 Identities=23% Similarity=0.194 Sum_probs=44.3
Q ss_pred ccccccccccc--------cccchHHHHHHhhhcCcceeeec-ccc-ccchhhhHHhhhCCCcccc
Q psy8912 303 RVEDAKGTLLN--------LYRDIPEIVKYLKDHNIKLALAS-RTV-HIRNAYSLLHLLGLSDFFD 358 (538)
Q Consensus 303 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 358 (538)
-+-|-+|||.+ ..|.+.+.++.|+++|+...+|| |++ ....+..+++.+|+.-.+.
T Consensus 6 i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 6 IAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp EEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred EEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEE
Confidence 35688888876 24777899999999999999998 653 5678899999999965444
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.72 E-value=0.076 Score=61.41 Aligned_cols=90 Identities=7% Similarity=0.014 Sum_probs=64.3
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc-ccccc-----------------------eeecCCc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHK-----------------------EIFPGQK 477 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~-yFd~~-----------------------~i~~~~k 477 (538)
-+++|++.+.+++|++.|+++.++|.-+ +..+..+-+.+||.. .++.. .++..-.
T Consensus 487 Dp~R~~a~~aI~~l~~aGI~v~MiTGD~-~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~ 565 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVF 565 (885)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEESSC-HHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCC
T ss_pred cccchhHHHHHHHHHHcCCcEEEEcCCC-hHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEEC
Confidence 3578999999999999999999999765 568888999999953 11100 0122222
Q ss_pred hHH---HHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 478 TTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 478 ~~~---~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
|+. +.+.+++.| +.+.++||..||+.+-++|++-+
T Consensus 566 P~~K~~iV~~lq~~g---~~Vam~GDGvNDapaLk~AdvGI 603 (885)
T 3b8c_A 566 PEHKYEIVKKLQERK---HIVGMTGDGVNDAPALKKADIGI 603 (885)
T ss_dssp HHHHHHHHHHHHHTT---CCCCBCCCSSTTHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHCC---CeEEEEcCCchhHHHHHhCCEeE
Confidence 333 334444444 67899999999999999987654
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=90.52 E-value=0.41 Score=41.52 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=25.5
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTE 450 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~ 450 (538)
..+.|++.+.|+.|+++|+++++||+...
T Consensus 23 ~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 23 VLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 45778999999999999999999998753
|
| >3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=82.56 E-value=0.31 Score=46.47 Aligned_cols=62 Identities=15% Similarity=0.049 Sum_probs=44.0
Q ss_pred cccccchhhcccceeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeec--cceEEEEehhhH
Q psy8912 208 EERNARSISKLGVIGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAV--STTVRILHVQNI 275 (538)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 275 (538)
.-.+++.||++|+ |++...--. .. +|.++-.-.+ |+-.+. ++.|+..+++ +.+|+++|.++.
T Consensus 27 ~l~~a~~VLEiGt-GySTl~lA~-~~--~g~VvtvE~d-~~~~~~-ar~~l~~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 27 AYEEAEVILEYGS-GGSTVVAAE-LP--GKHVTSVESD-RAWARM-MKAWLAANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp HHHHCSEEEEESC-SHHHHHHHT-ST--TCEEEEEESC-HHHHHH-HHHHHHHSCCCTTCEEEEEECCCS
T ss_pred HhhCCCEEEEECc-hHHHHHHHH-cC--CCEEEEEeCC-HHHHHH-HHHHHHHcCCCCCCceEEEEeCch
Confidence 3467899999999 876433222 11 5776655444 455555 7889999999 999999998854
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=81.88 E-value=7.1 Score=38.46 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=69.3
Q ss_pred HHHHHHHC-CceEEEEeCCC-chHHHHHHHhhcCCccccccceeecC---CchHHHHHHHHHhCCCCCcEEEEecccccH
Q psy8912 431 ILKYLKQN-NCLVAAASRTT-EMLRAHQLVDLFNWNQHFDHKEIFPG---QKTTHFANLKKATGIEYKDMVFFDDEERNS 505 (538)
Q Consensus 431 ~L~~Lk~~-GiklaIASss~-~~~~a~~~L~~lgL~~yFd~~~i~~~---~k~~~~~kal~~lgi~pee~l~~eDs~~~I 505 (538)
.|.....+ +..-.++|++. .|..|+ +=.+||..+|....+++. +|..-|.++.++.| +...-++|||..---
T Consensus 167 ~L~~i~sr~~~vNVLVTs~qLVPaLaK--~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe 243 (274)
T 3geb_A 167 ALNLINSRPNCVNVLVTTTQLIPALAK--VLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEE 243 (274)
T ss_dssp HHHHHHHSTTEEEEEEESSCHHHHHHH--HHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHH
T ss_pred HHHhhccCCceeEEEEecCchHHHHHH--HHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHH
Confidence 33333333 44455666553 222222 334799999998788887 45566999999998 557788999999999
Q ss_pred HhHcccCCEEEEECCCCCHHHHHHHHH
Q psy8912 506 HDVSPLGVTCIHVKDGMSHSVLHKGLK 532 (538)
Q Consensus 506 ~aAk~aGi~~i~V~dg~t~~~~~~~l~ 532 (538)
+|||+.++.++.|....+......+|+
T Consensus 244 ~AAk~~n~PFwrI~~h~Dl~~l~~al~ 270 (274)
T 3geb_A 244 QGAKKHNMPFWRISCHADLEALRHALE 270 (274)
T ss_dssp HHHHHTTCCEEECCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEeecCccHHHHHHhhc
Confidence 999999999999877655555555443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 538 | ||||
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 4e-18 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 7e-15 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 9e-06 |
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.5 bits (195), Expect = 4e-18
Identities = 74/138 (53%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 14 KFPKMVVFDLDYTLWPLHV-HDLVAPFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENK 71
+ PK+ VFDLDYTLWP V + PF K V D +G I+ Y VPE+L L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLG 62
Query: 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131
VAAASRTSEI A Q+L L +L +YF +EIYPG K THFE L TG+ + MVFFD
Sbjct: 63 VPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFD 122
Query: 132 DEERNSHDVSPLGVTCIH 149
DE RN DV LGVTCIH
Sbjct: 123 DENRNIIDVGRLGVTCIH 140
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.2 bits (171), Expect = 7e-15
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 411 RDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK 470
V D G I+ Y +VP +L L+ VAAASRT+E+ A+QL++LF+ ++F +
Sbjct: 34 DGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQR 93
Query: 471 EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKG 530
EI+PG K THF L TG+ + MVFFDDE RN DV LGVTCIH++DGMS L +G
Sbjct: 94 EIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQG 153
Query: 531 LKQWASK 537
L+ +A
Sbjct: 154 LETFAKA 160
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.7 bits (102), Expect = 9e-06
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 297 KHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDF 356
V D +G + LY ++PE++ L+ + +A ASRT I+ A LL L L +
Sbjct: 30 HKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY 89
Query: 357 FDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQV 409
F +EI+P K+ HF L + + + MVFFDDE RN + +LGV I +
Sbjct: 90 FIQREIYP-GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHI 141
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.93 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.86 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.85 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.85 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.84 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.83 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.82 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.81 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.81 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.8 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.8 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.8 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.78 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.78 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.78 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.76 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.73 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.73 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.69 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.68 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.68 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.66 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.66 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.66 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.65 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.65 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.63 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.6 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.59 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.58 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.56 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.53 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.5 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.5 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.49 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.49 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.48 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.46 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.45 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.42 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.39 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.39 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.38 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.35 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.34 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.33 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.32 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.32 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.31 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.3 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.3 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.28 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.23 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.19 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.1 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.07 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.06 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.0 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.96 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.9 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.88 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.87 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.81 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.77 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.76 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.76 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 98.75 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.72 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.7 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.69 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.68 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.66 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.6 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.6 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.56 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.47 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.42 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.4 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.32 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.14 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.07 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 97.97 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.89 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.86 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.81 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.77 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 97.67 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 97.65 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 97.6 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 97.59 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 97.53 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.53 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.47 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 97.46 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.45 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.35 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.34 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.3 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.21 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.13 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.99 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 96.97 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.84 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.67 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 96.17 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 96.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.52 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 95.45 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 94.4 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.4 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 90.64 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 84.27 |
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=6.3e-26 Score=208.64 Aligned_cols=152 Identities=41% Similarity=0.663 Sum_probs=133.8
Q ss_pred CccceEEeecC------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHH
Q psy8912 382 KYKDMVFFDDE------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH 455 (538)
Q Consensus 382 ~~~~l~~~Dld------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~ 455 (538)
+.|.+++|||| ..+.-..+|++.. ..+.+.+.++.++.+||||.++|++|+++|++++|+|+++++..++
T Consensus 3 ~~pK~viFDlDGTL~d~~~~~~~~~~~~~~----~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~ 78 (164)
T d1u7pa_ 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKS----SDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGAN 78 (164)
T ss_dssp CCCSEEEECCBTTTBSSCTTTTCCSCEEEC----TTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHH
T ss_pred CCCCEEEEcCCCcccCCccccccCccHhHH----hcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhc
Confidence 35899999999 2222222566643 5567788899999999999999999999999999999988877788
Q ss_pred HHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHH
Q psy8912 456 QLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 535 (538)
Q Consensus 456 ~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~ 535 (538)
.+++.+++.+||+.......+++++|.++++++|++|++||||||+.+|+++|+++|+.||+|+||++.++|+++++.|+
T Consensus 79 ~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l~~f~ 158 (164)
T d1u7pa_ 79 QLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFA 158 (164)
T ss_dssp HHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHHHHHHH
T ss_pred cchhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 89999999999996665666788899999999999999999999999999999999999999999999999999999998
Q ss_pred hc
Q psy8912 536 SK 537 (538)
Q Consensus 536 ~~ 537 (538)
++
T Consensus 159 ~~ 160 (164)
T d1u7pa_ 159 KA 160 (164)
T ss_dssp HH
T ss_pred Hh
Confidence 86
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1.8e-26 Score=212.35 Aligned_cols=151 Identities=52% Similarity=0.824 Sum_probs=130.3
Q ss_pred cCCCCceEEEeCCCCCChhhHhhhh-chhHHHH-HHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHH
Q psy8912 12 VKKFPKMVVFDLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQI 89 (538)
Q Consensus 12 m~~~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~-~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~ 89 (538)
|+..||+|+||+|||||+.+.+... +++.... ..+.+.....+.+|||+.++|+.|+++|++++|+||++.+......
T Consensus 1 m~~~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~ 80 (164)
T d1u7pa_ 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQL 80 (164)
T ss_dssp CCCCCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHH
T ss_pred CCCCCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccc
Confidence 4556899999999999999888777 6665555 3333456677899999999999999999999999998874667778
Q ss_pred HHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 90 LNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 90 L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
++.+++..+|..+.....++|++|..+++++|++|++|+||||+..|+++|+++|+.||+|.+|.+...+.++
T Consensus 81 l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~ 153 (164)
T d1u7pa_ 81 LELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQG 153 (164)
T ss_dssp HHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHH
T ss_pred hhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 8999999999988777788899999999999999999999999999999999999999999999876665543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.86 E-value=1e-21 Score=184.67 Aligned_cols=123 Identities=18% Similarity=0.194 Sum_probs=106.4
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|..|+++|++++++||++. ..++..++.+|+.++|+.+.. ..+++|++|..++++++++|+
T Consensus 91 ~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~ 169 (224)
T d2hsza1 91 CNISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 169 (224)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred ccccchHHHHHHHHHHHhccCCcccccccccH-HHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhh
Confidence 45678999999999999999999999999988 899999999999999997621 234567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|+||||+..|+.+|+++|+.+|+|.+|......+. ...||+++.+..+
T Consensus 170 ~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~---~~~~d~~v~~l~d 218 (224)
T d2hsza1 170 QILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIA---QSKPDWIFDDFAD 218 (224)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGG---GGCCSEEESSGGG
T ss_pred ccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhh---hcCCCEEECCHHH
Confidence 999999999999999999999999999887655433 3468888876443
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.85 E-value=3e-21 Score=180.78 Aligned_cols=122 Identities=7% Similarity=0.049 Sum_probs=106.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eecCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIYPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
.....++||+.++|+.|+.+ ++++++||++. ..++..++.+|+..+|+.+ ...+.++|++|..+++++|++|++|
T Consensus 80 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 157 (210)
T d2ah5a1 80 IYEAQLFPQIIDLLEELSSS-YPLYITTTKDT-STAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQA 157 (210)
T ss_dssp GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGE
T ss_pred hhcccchhHHHHHHhhhhcc-cchhhcccccc-hhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccc
Confidence 55678999999999999977 58999999988 9999999999999999986 3345567899999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+||||+.+|+.+|+++|+++++|.+|....+... ...||+++.+..+
T Consensus 158 v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~---~~~pd~vi~~l~e 204 (210)
T d2ah5a1 158 IIIGDTKFDMLGARETGIQKLAITWGFGEQADLL---NYQPDYIAHKPLE 204 (210)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHH---TTCCSEEESSTTH
T ss_pred eeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHH---hCCCCEEECCHHH
Confidence 9999999999999999999999999987766544 3568999877554
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.8e-21 Score=183.30 Aligned_cols=124 Identities=13% Similarity=0.084 Sum_probs=103.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||+++ ..++..++.+|+.++|+.+.. . ++++|++|..+++++|++|++
T Consensus 85 ~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~ 163 (218)
T d1te2a_ 85 ETRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 163 (218)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred ccccccchHHHHHHHhhhccccccccccccc-cccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchh
Confidence 3456799999999999999999999999988 999999999999999998722 2 334568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhH
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHV 180 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~ 180 (538)
|+||||+..|+.+|+++|+.+|+|.++....... ...+++++.+..+..+
T Consensus 164 ~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~----~~~a~~~i~~l~el~~ 213 (218)
T d1te2a_ 164 CVALEDSVNGMIASKAARMRSIVVPAPEAQNDPR----FVLANVKLSSLTELTA 213 (218)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGG----GGGSSEECSCGGGCCH
T ss_pred cEEEeeCHHHHHHHHHcCCEEEEECCCCCccchh----hcCCCEEECChhhCCH
Confidence 9999999999999999999999998765543322 2357888777655433
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.84 E-value=7.1e-21 Score=184.22 Aligned_cols=125 Identities=11% Similarity=0.024 Sum_probs=102.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---eecCC--CCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---EIYPG--QKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e~~~~--~Kp~~f~~ale~lgi~P 124 (538)
.....++||+.++|+.|+++|++++|+||++. ..++..++.+|+.++| +.+ +..+. +.|++|..+++++|+.|
T Consensus 95 ~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~-~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p 173 (257)
T d1swva_ 95 PRYASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 173 (257)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred hccCccCCcHHHHHHHHHhcccceeecCCCch-hhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCC
Confidence 44567999999999999999999999999988 9999999999999887 544 22333 44589999999999965
Q ss_pred -CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc----hHh----------------HHhhCCCCCCEEEeCCc
Q psy8912 125 -KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS----GRL----------------KEATGIDYKDMIYFDDE 176 (538)
Q Consensus 125 -~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~----~~~----------------~~~l~~~~~d~Ii~d~~ 176 (538)
++|+||||+..|+.+|+++||.+|+|.+|... .+. ...+...+||+++.+..
T Consensus 174 ~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~ 246 (257)
T d1swva_ 174 MNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQ 246 (257)
T ss_dssp GGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGG
T ss_pred cceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHH
Confidence 89999999999999999999999999998642 111 11244456999998754
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.83 E-value=8.2e-21 Score=178.18 Aligned_cols=118 Identities=7% Similarity=0.034 Sum_probs=100.6
Q ss_pred hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCC
Q psy8912 50 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P 124 (538)
.....+++||+.++|+.|++ +++++|+||+.. ..++..++.+|+..+|+.+.. . ++++|++|..+++++|++|
T Consensus 77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 154 (207)
T d2hdoa1 77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRR-NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 154 (207)
T ss_dssp CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCH-HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred cccccccccchhhhhhhhcc-cccccccccccc-cccccccccccccccccccccccccccchhhhhhhcccccceeeec
Confidence 45567899999999999985 699999999988 999999999999999998722 2 3355699999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
++|+||||+.+|+++|+++||.+++|.+|.......+ .+++++.+
T Consensus 155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~-----~~~~~i~~ 199 (207)
T d2hdoa1 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQ-----KVAHRFQK 199 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGS-----CCSEEESS
T ss_pred cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhh-----hcCcEeCC
Confidence 9999999999999999999999999999887665432 35666654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.82 E-value=2.7e-20 Score=173.93 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=90.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++|+||++. . +...++.+|+.+||+.+.. .++++|++|..+++++|++|+
T Consensus 78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~-~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~ 155 (204)
T d2go7a1 78 NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-N-AFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 155 (204)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-H-HHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCcccchHHhhhhcccccccchhhhcccch-h-hhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence 55678999999999999999999999999866 4 5568999999999998721 334567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+|+||||+.+|+++|+++||++|+|.++.
T Consensus 156 ~~l~VgD~~~Di~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 156 NTYYIGDRTLDVEFAQNSGIQSINFLEST 184 (204)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred eEEEEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence 99999999999999999999999998774
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.81 E-value=6.4e-20 Score=172.95 Aligned_cols=122 Identities=18% Similarity=0.207 Sum_probs=98.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---I--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|++.|++++++||+.. ....++.+|+.++|+.+. . .++++|++|+.+++++|++|++
T Consensus 88 ~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~ 164 (221)
T d1o08a_ 88 SPADVYPGILQLLKDLRSNKIKIALASASKN---GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSE 164 (221)
T ss_dssp CGGGBCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGG
T ss_pred ccccccCCceeccccccccccceEEEeecch---hhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCce
Confidence 3567999999999999999999999999855 688999999999999861 1 2334568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
|+||||+..|+++|+++||.+|+|.++.. . ..++.++++.....+..+.+
T Consensus 165 ~l~VgD~~~di~~A~~aG~~~i~v~~~~~-------~--~~~~~~~~~~~~~~~~~l~e 214 (221)
T d1o08a_ 165 SIGLEDSQAGIQAIKDSGALPIGVGRPED-------L--GDDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESCHHH-------H--CSSSEEESSGGGCCHHHHHH
T ss_pred EEEEecCHHHHHHHHHcCCEEEEECChhh-------c--ccccEEcCCcccCCHHHHHH
Confidence 99999999999999999999999976421 1 12455566655545555444
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.81 E-value=7.8e-20 Score=173.66 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=101.7
Q ss_pred cCCCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeec---CCCC--HHHHHHHHHHc---C
Q psy8912 51 GTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---PGQK--TTHFESLKKAT---G 121 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~---~~~K--p~~f~~ale~l---g 121 (538)
.....++||+.++|+.|+++| ++++|+||++. ..+...++.+|+.++|+.+... ...| |.++...++.+ +
T Consensus 87 ~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~-~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~ 165 (228)
T d2hcfa1 87 REDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGAN 165 (228)
T ss_dssp GGGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred ccCceecCchHHHHhhhhccccccccccCCCcc-hhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccC
Confidence 345689999999999999987 89999999988 9999999999999999986322 2233 46666555555 8
Q ss_pred CCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 122 IEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 122 i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|+||||+.+|+++|+++||.+|+|.+|....+.+. ...||+++.+..+
T Consensus 166 ~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~---~~~ad~vi~~~~e 218 (228)
T d2hcfa1 166 YSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELA---RHKPGTLFKNFAE 218 (228)
T ss_dssp CCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHH---TTCCSEEESCSCC
T ss_pred CChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHh---hCCCCEEECCHHH
Confidence 9999999999999999999999999999999987766543 4578999877543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.1e-19 Score=171.56 Aligned_cols=100 Identities=12% Similarity=0.116 Sum_probs=88.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
...++||+.++|.+|+++|++++|+||++. ......++..++.++|+.. +. ..+++|.+|..+++++|++|++
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~ 203 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSV-EAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN 203 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcH-HHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCc
Confidence 456899999999999999999999999988 8888999999998887754 11 2355678999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|+||||+..|+.+|+++||++|+|...
T Consensus 204 ~l~vgD~~~dv~aA~~aG~~ti~v~r~ 230 (253)
T d1zs9a1 204 ILFLTDVTREASAAEEADVHVAVVVRP 230 (253)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEEeCC
Confidence 999999999999999999999999753
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.80 E-value=1.3e-19 Score=172.60 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=99.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|++ |++++++||++. ......++.+|+.++|+.+.. ..+++|++|..+++++|++|++
T Consensus 97 ~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~ 174 (230)
T d1x42a1 97 RYGELYPEVVEVLKSLKG-KYHVGMITDSDT-EYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174 (230)
T ss_dssp HHCCBCTTHHHHHHHHBT-TBEEEEEESSCH-HHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred hhCcccccHHHHHHHhhc-cCceeeeecccc-ccchhhhcccccccccccccccccccccchhhHHHHHHHhhhcccccc
Confidence 346789999999999975 799999999988 899999999999999998722 2345568999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|+||||+. +|+++|+++|+.++++.++...... ...+|+++.+..+
T Consensus 175 ~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~-----~~~~d~~i~~l~e 221 (230)
T d1x42a1 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREF-----WDKCDFIVSDLRE 221 (230)
T ss_dssp EEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGG-----GGGSSEEESSTTH
T ss_pred cceeecCcHhHHHHHHHcCCEEEEECCCCCCccc-----ccCCCEEECCHHH
Confidence 99999985 7999999999999999876544332 2357898887644
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.80 E-value=1.8e-19 Score=169.12 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=100.6
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++|++.++++.|+++|++++++||+.. ...+..++..++..+|+.+.. .+ ++.|+.|..+++++|++|+
T Consensus 89 ~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~-~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~ 167 (220)
T d1zrna_ 89 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRS 167 (220)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred hccccccchhHHHHHHHHhcCCeEEeecchHH-HHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCc
Confidence 45577999999999999999999999999988 999999999999999998722 22 3345899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|+||||+..|+++|+++||++|+|.++...... + ...||+++.+.
T Consensus 168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~---~-~~~~d~~i~~l 213 (220)
T d1zrna_ 168 AILFVASNAWDATGARYFGFPTCWINRTGNVFEE---M-GQTPDWEVTSL 213 (220)
T ss_dssp GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCS---S-SCCCSEEESSH
T ss_pred eEEEEecChHhHHHHHHcCCEEEEEcCCCCCccc---c-cCCCCEEECCH
Confidence 9999999999999999999999999754332221 2 34588888764
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.78 E-value=4.4e-19 Score=169.95 Aligned_cols=121 Identities=11% Similarity=0.043 Sum_probs=97.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+ +|++++++||++. ......++.+|+.++|+.+.. .+ ++.|++|..+++++|++|++
T Consensus 106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~ 183 (247)
T d2gfha1 106 QHMILADDVKAMLTELR-KEVRLLLLTNGDR-QTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD 183 (247)
T ss_dssp HTCCCCHHHHHHHHHHH-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred ccCccCccHHHHHHHhh-cccceEEeecccc-hhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHh
Confidence 45678999999999998 5799999999988 888999999999999998622 23 34568999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|+||||+. +|+.+|+++||.++.+..+..... ......||+++.+..+
T Consensus 184 ~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~---~~~~~~p~~~i~~l~e 232 (247)
T d2gfha1 184 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVP---LTSSPMPHYMVSSVLE 232 (247)
T ss_dssp EEEEESCTTTHHHHHHHTTCSEEEEECTTCCCC---SSCCCCCSEEESSGGG
T ss_pred cceeccChHhHHHHHHHcCCeEEEEECCCCCCc---ccccCCCCEEECCHHH
Confidence 99999996 799999999998665443322221 2345578998887544
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.78 E-value=4.7e-19 Score=164.30 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=86.2
Q ss_pred hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCC
Q psy8912 50 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEY 124 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P 124 (538)
......++||+.++|+.|+++|++++|+||++. ... ..++.+++..+|+.+.. .. +++|++|..+++++++
T Consensus 74 ~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~-- 149 (187)
T d2fi1a1 74 ELEHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI-- 149 (187)
T ss_dssp HTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--
T ss_pred HhhcCcccchhHHHHHHHHhhhccccccccCcc-chh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--
Confidence 356778999999999999999999999999866 555 57899999999998722 22 3346899999999986
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
++|+||||+..|+++|+++|+.|++++++..
T Consensus 150 ~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~ 180 (187)
T d2fi1a1 150 SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVN 180 (187)
T ss_dssp SSEEEEESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred CCeEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 4599999999999999999999999976543
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.78 E-value=9.1e-19 Score=166.67 Aligned_cols=99 Identities=10% Similarity=0.111 Sum_probs=87.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecC--CCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYP--GQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~--~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|++.++|+.|+ |+.++++||++. ..+...++..++..+|+.+. ..+ ++.|++|..+++++|++|++
T Consensus 90 ~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~-~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e 166 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELA--PLKRAILSNGAP-DMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAE 166 (245)
T ss_dssp GSCCBCTTHHHHHHHHT--TSEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGG
T ss_pred cccccchhhhHHHHHHh--hhceeEEeccch-HHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhh
Confidence 35678999999999996 678999999988 88999999999999999872 223 34468999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|+||||+..||.+|+++||++|+|...
T Consensus 167 ~l~VgD~~~di~~A~~aG~~tv~v~r~ 193 (245)
T d1qq5a_ 167 VLFVSSNGFDVGGAKNFGFSVARVARL 193 (245)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred EEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 999999999999999999999999743
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.76 E-value=9.4e-19 Score=164.91 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=101.1
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee------c--CCCCHHHHHHHHHHcCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI------Y--PGQKTTHFESLKKATGI 122 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~------~--~~~Kp~~f~~ale~lgi 122 (538)
.....++||+.++|++|+.+ .+++||+.. ..+...++.+++..+|+.+.. . ++++|++|..+++++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~---~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~ 156 (222)
T d2fdra1 81 ERDVKIIDGVKFALSRLTTP---RCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGV 156 (222)
T ss_dssp HHHCCBCTTHHHHHHHCCSC---EEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred hhccchhhhHHHHhhhcccc---ceeeeecch-hhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCC
Confidence 44578899999999999754 579999988 999999999999999997521 1 23455899999999999
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCch-HhHHhhCCCCCCEEEeCCch
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSG-RLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~-~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|++|+||||+..|+++|+++||.+|+|.++.... .....+...+||+++.+..+
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~e 212 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQD 212 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGG
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHH
Confidence 99999999999999999999999999999987543 22334555678999987644
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.73 E-value=1.4e-18 Score=162.80 Aligned_cols=112 Identities=15% Similarity=0.047 Sum_probs=93.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcH---HHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEI---LHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~ 123 (538)
....++|++.++|..|+++|++++++||+... ......+...++.+||+.+.. ..++.|++|..+++++|++
T Consensus 94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~ 173 (222)
T d1cr6a1 94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAK 173 (222)
T ss_dssp HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSC
T ss_pred hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCC
Confidence 34678999999999999999999999985331 345666778889999998722 2345679999999999999
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhh
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEAT 163 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l 163 (538)
|++|+||||+..|+++|+++||.+|+|.++......++.+
T Consensus 174 p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~ 213 (222)
T d1cr6a1 174 PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKV 213 (222)
T ss_dssp TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHHH
T ss_pred cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHHh
Confidence 9999999999999999999999999999887765555543
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=8.9e-19 Score=162.77 Aligned_cols=111 Identities=15% Similarity=0.033 Sum_probs=88.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcH---HHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEI---LHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~ 123 (538)
....++||+.++|..|+++|++++++||.... ..........++.++|+.+.. ..+++|++|..+++++|++
T Consensus 96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence 45678999999999999999999999997541 233344455677789998722 2345679999999999999
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
|++|+||||+..|+++|+++||++|+|.++....+.+++
T Consensus 176 p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~~l~~ 214 (225)
T d1zd3a1 176 PSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEK 214 (225)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHHHHHH
T ss_pred ccceeEEecCHHHHHHHHHcCCEEEEECCcchhHHHHHH
Confidence 999999999999999999999999999876544444433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=1.2e-16 Score=155.12 Aligned_cols=70 Identities=13% Similarity=-0.043 Sum_probs=59.3
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++.|.+|..+++++|++|++|+||||++. ||.+|+++||++|+|.+|......++. ....||+++.+..+
T Consensus 176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~-~~~~pd~i~~sl~e 246 (250)
T d2c4na1 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS-MPFRPSWIYPSVAE 246 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSS-CSSCCSEEESSGGG
T ss_pred cchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHh-CCCCCCEEECCHHH
Confidence 34568899999999999999999999975 999999999999999999887776554 33568999987544
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=1e-16 Score=149.17 Aligned_cols=143 Identities=14% Similarity=0.053 Sum_probs=101.9
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------------
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------ 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------ 83 (538)
+++|+||+||||+...- +. .....++++||+.++|+.|+++|++++++||.+..
T Consensus 2 ~~Av~~DrDGtl~~~~~--y~------------~~~~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~ 67 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHG--YV------------HEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFET 67 (182)
T ss_dssp BCEEEECSBTTTBCCCS--SC------------CSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHH
T ss_pred CCEEEEeCCCCccCCCC--CC------------CCHHHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhh
Confidence 78999999999964210 00 01335789999999999999999999999998531
Q ss_pred --HHHHHHHHHcCCCC---CCcce------------eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 84 --LHAKQILNLINLNQ---YFSNK------------EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 84 --~~~~~~L~~lgL~~---~Fd~i------------e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
......+...++.- +|... ....++.|.++..++++++++|++++||||+.+|+++|+++|+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~ 147 (182)
T d2gmwa1 68 LTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVG 147 (182)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCS
T ss_pred hhhhhhhhhhhhcccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCC
Confidence 12223333334321 11000 01124556999999999999999999999999999999999995
Q ss_pred -EEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 147 -CIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 147 -tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+++|.+|.......+. .+|+|+.+..
T Consensus 148 ~~~lv~~g~~~~~~~~~----~ad~v~~~l~ 174 (182)
T d2gmwa1 148 TKVLVRTGKPITPEAEN----AADWVLNSLA 174 (182)
T ss_dssp EEEEESSSSCCCHHHHH----HCSEEESCGG
T ss_pred cEEEECCCCCCCccccc----CCCEEECCHH
Confidence 5888888766554433 4788877643
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=9.5e-18 Score=154.29 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=90.8
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------- 83 (538)
|+|+||+||||+......+. -.....+.++||+.++|+.|+++|++++++||.+..
T Consensus 3 K~i~~D~DGtL~~~~~~~~~-----------~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~ 71 (161)
T d2fpwa1 3 KYLFIDRDGTLISEPPSDFQ-----------VDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGP 71 (161)
T ss_dssp EEEEECCBTTTBCCC--CCC-----------CCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHH
T ss_pred cEEEEeCCCCeEeeCCCCCc-----------cCCHHHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhh
Confidence 89999999999763322111 011235789999999999999999999999997510
Q ss_pred -HHHHHHHHHcCCCC---CCcce---eecC--CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 84 -LHAKQILNLINLNQ---YFSNK---EIYP--GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 84 -~~~~~~L~~lgL~~---~Fd~i---e~~~--~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
......+...|+.. +|+.. +... ++.|.++..+++++|++|++|+||||+..|+++|+++||.++++..+.
T Consensus 72 ~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 72 HNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred hhhhhhhccccccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 23445566666532 33321 1122 445689999999999999999999999999999999999999997654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.66 E-value=3.6e-17 Score=156.49 Aligned_cols=130 Identities=10% Similarity=-0.025 Sum_probs=94.5
Q ss_pred cCCCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--------
Q psy8912 12 VKKFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI-------- 83 (538)
Q Consensus 12 m~~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p-------- 83 (538)
+++.+++|+||+||||+... .+. .....++++||+.++|+.|+++|++++|+||.+..
T Consensus 19 ~p~~~~Aif~DrDGtl~~~~--~y~------------~~~~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~ 84 (209)
T d2o2xa1 19 FPPHLPALFLDRDGTINVDT--DYP------------SDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWS 84 (209)
T ss_dssp CCSSCCCEEECSBTTTBCCC--SCT------------TCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHH
T ss_pred CCCCCCEEEEeCCCCeECCC--CCC------------CCHHHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhh
Confidence 44456899999999996421 000 11235789999999999999999999999995310
Q ss_pred ------HHHHHHHHHcCCC--CCCcce--e-----------ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhh
Q psy8912 84 ------LHAKQILNLINLN--QYFSNK--E-----------IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 84 ------~~~~~~L~~lgL~--~~Fd~i--e-----------~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~ 142 (538)
......+...|+. ..|... . ...+++|.++..++++++++|++|+||||+..|+++|++
T Consensus 85 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~ 164 (209)
T d2o2xa1 85 AFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR 164 (209)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH
T ss_pred hhhhhhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHH
Confidence 2233445555532 111100 0 012445689999999999999999999999999999999
Q ss_pred cCCeEEEECCCCC
Q psy8912 143 LGVTCIHSWLMMS 155 (538)
Q Consensus 143 aG~~tI~V~~G~~ 155 (538)
+||.++++.+|..
T Consensus 165 AGi~~i~v~~g~~ 177 (209)
T d2o2xa1 165 AGLAQGWLVDGEA 177 (209)
T ss_dssp TTCSEEEEETCCC
T ss_pred CCCcEEEEeCCCC
Confidence 9999999988764
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=1.2e-17 Score=151.29 Aligned_cols=104 Identities=21% Similarity=0.260 Sum_probs=87.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-CCCCCCcceee-----cCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-NLNQYFSNKEI-----YPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-gL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P 124 (538)
.....+++++.+++..++.+|++++++||++. ......+..+ ++..+|+.+.. .++++|++|..+++++|++|
T Consensus 80 ~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~ 158 (197)
T d2b0ca1 80 AVFVALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSP 158 (197)
T ss_dssp TCEEEECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred HhccccCchhHHHHHHHHhcCCeEEEEeCccH-HHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCC
Confidence 34457889999999999999999999999877 5555555554 67788987622 34566799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
++|+||||+..|+++|+++|+++|+|.....
T Consensus 159 ~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~ 189 (197)
T d2b0ca1 159 SDTVFFDDNADNIEGANQLGITSILVKDKTT 189 (197)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred CeEEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999999976543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.66 E-value=4.3e-17 Score=158.12 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=58.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 106 PGQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 106 ~~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++++|.+|..+++++|++|++|+||||+. +||++|+++||++++|.+|.......... ...||+++.+..+
T Consensus 179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~-~~~Pd~vi~sl~e 250 (253)
T d1yv9a1 179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTL-PTPPTYVVDSLDE 250 (253)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTC-SSCCSEEESSGGG
T ss_pred cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhc-CCCCCEEECCHHH
Confidence 34556889999999999999999999996 59999999999999999998765554433 3458999987543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.65 E-value=5.8e-16 Score=150.31 Aligned_cols=69 Identities=10% Similarity=0.071 Sum_probs=58.9
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++.|.+|..+++++|++|++|+||||+. +||.+|+++||.+|+|.+|......... ....||+++.+..
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~-~~~~PD~ii~~l~ 254 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLER-AETKPDFVFKNLG 254 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHH-CSSCCSEEESSHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhh-cCCCCCEEECCHH
Confidence 3455889999999999999999999996 5999999999999999999887776554 3457899998743
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.65 E-value=8.1e-17 Score=156.51 Aligned_cols=69 Identities=6% Similarity=-0.036 Sum_probs=58.1
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++.|.+|..+++++|++|++|+||||+.. ||.+|+++||++|+|.+|....+..... ...||+++.+..
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~-~~~PD~vi~sl~ 249 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPAL-PIQPDFVLSSLA 249 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGC-SSCCSEEESCGG
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhc-CCCCCEEECCHH
Confidence 34468899999999999999999999976 9999999999999999998766654443 346899998754
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.63 E-value=7.2e-17 Score=150.84 Aligned_cols=108 Identities=8% Similarity=0.098 Sum_probs=92.1
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIE 491 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~ 491 (538)
.+...+.++||+.++|++|++ +++++|+|++.. ..++..|+++|+.+||+..... .. +++..|..+++++|++
T Consensus 76 ~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~ 153 (207)
T d2hdoa1 76 SHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRR-NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA 153 (207)
T ss_dssp TCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCH-HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred ccccccccccchhhhhhhhcc-cccccccccccc-cccccccccccccccccccccccccccchhhhhhhcccccceeee
Confidence 334467899999999999985 699999998875 5889999999999999943222 11 4577799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
|++|++|||+.+|+++|+++|+.+|+|.||.+...
T Consensus 154 ~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~ 188 (207)
T d2hdoa1 154 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNA 188 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTG
T ss_pred ccceeEecCCHHHHHHHHHcCCeEEEEecCCCChh
Confidence 99999999999999999999999999999876653
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=7.5e-16 Score=144.28 Aligned_cols=105 Identities=13% Similarity=0.139 Sum_probs=90.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC-----CchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++|+|++++. .+...++.+||.+||+....... ++++.|..+++++|++|++
T Consensus 85 ~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~-~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~ 163 (218)
T d1te2a_ 85 ETRPLLPGVREAVALCKEQGLLVGLASASPLH-MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 163 (218)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred ccccccchHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchh
Confidence 34678999999999999999999999998754 78899999999999994333211 3467799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
|++|||+..|+.+|+++|+++|+|+++....
T Consensus 164 ~l~igD~~~di~aA~~~G~~~i~v~~~~~~~ 194 (218)
T d1te2a_ 164 CVALEDSVNGMIASKAARMRSIVVPAPEAQN 194 (218)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECCCTTTTT
T ss_pred cEEEeeCHHHHHHHHHcCCEEEEECCCCCcc
Confidence 9999999999999999999999998875544
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.59 E-value=6.6e-16 Score=143.66 Aligned_cols=104 Identities=8% Similarity=0.074 Sum_probs=89.9
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee-----ecCCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i-----~~~~k~~~~~kal~~lgi~p 492 (538)
+...+.++|||.++|+.|+++|++++|+|++.. .+..+|+++||.+||+.+.. ...++++.|..+++++|++|
T Consensus 77 ~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~--~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p 154 (204)
T d2go7a1 77 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGN--NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS 154 (204)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT--HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred hcccCcccchHHhhhhcccccccchhhhcccch--hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCC
Confidence 344578999999999999999999999998764 45678999999999994322 11257888999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.+|+|.+|..
T Consensus 155 ~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~ 185 (204)
T d2go7a1 155 DNTYYIGDRTLDVEFAQNSGIQSINFLESTY 185 (204)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEESSCCSC
T ss_pred ceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC
Confidence 9999999999999999999999999998743
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.58 E-value=2e-15 Score=145.38 Aligned_cols=191 Identities=8% Similarity=0.045 Sum_probs=125.6
Q ss_pred ccccccccccccccc--hHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccccccCcchhhhhhhhcccCcC
Q psy8912 303 RVEDAKGTLLNLYRD--IPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKDSK 380 (538)
Q Consensus 303 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (538)
-|-|-.|||....+. +....+.+++.|+++. .+ ++...+|+.++-..+++.....-..-|+.+.+...
T Consensus 5 viFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~-------~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T d1swva_ 5 VIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAIT-------AE---EARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLP 74 (257)
T ss_dssp EEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCC-------HH---HHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCC
T ss_pred EEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCC-------HH---HHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccC
Confidence 367899999876653 5666788899998752 11 12223344444333333322222222333222110
Q ss_pred CCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh
Q psy8912 381 IKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 460 (538)
Q Consensus 381 ~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~ 460 (538)
...++ ... ...........+.....++||+.++|++|+++|+++||+|++++. .++..|++
T Consensus 75 -----------~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~-~~~~~l~~ 135 (257)
T d1swva_ 75 -----------TEADI------QEM-YEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTRE-MMDIVAKE 135 (257)
T ss_dssp -----------CHHHH------HHH-HHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHH-HHHHHHHH
T ss_pred -----------CHHHH------HHH-HHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchh-hHHHHHHH
Confidence 00000 000 000112233334455789999999999999999999999998754 88889999
Q ss_pred cCCcccc-ccceee---cC--CchHHHHHHHHHhCCC-CCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 461 FNWNQHF-DHKEIF---PG--QKTTHFANLKKATGIE-YKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 461 lgL~~yF-d~~~i~---~~--~k~~~~~kal~~lgi~-pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|+.+|| |..... .. +.++.|.++++++|+. +++||||||+..||.+|++||+.+|+|.+|.
T Consensus 136 ~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~ 204 (257)
T d1swva_ 136 AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGS 204 (257)
T ss_dssp HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred HhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCC
Confidence 9999998 532221 22 3466799999999996 5999999999999999999999999999875
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.56 E-value=5e-15 Score=138.19 Aligned_cols=108 Identities=16% Similarity=0.229 Sum_probs=93.8
Q ss_pred hhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCC
Q psy8912 416 DAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGI 490 (538)
Q Consensus 416 d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi 490 (538)
........++||+.++|++|+++|++++++|++.. ..++..|+++||.+||+...... .++++.|..+++++|+
T Consensus 88 ~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 166 (224)
T d2hsza1 88 ENLCNISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGL 166 (224)
T ss_dssp HHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTC
T ss_pred HhhccccchHHHHHHHHHHHhccCCcccccccccH-HHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhh
Confidence 34555678999999999999999999999998875 47899999999999999422211 1567889999999999
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|++|++|||+..|+++|+++|+.+|.|.+|.+.
T Consensus 167 ~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~ 200 (224)
T d2hsza1 167 YPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNY 200 (224)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSCST
T ss_pred hhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCC
Confidence 9999999999999999999999999999998654
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.53 E-value=4e-15 Score=140.21 Aligned_cols=95 Identities=11% Similarity=0.040 Sum_probs=81.1
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce------------------eecCCCCHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK------------------EIYPGQKTTH 112 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i------------------e~~~~~Kp~~ 112 (538)
.....++||+.++|+.|+++|++++++||+.. ..++.+++.+|+.++|... ....+++|..
T Consensus 71 ~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~-~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 149 (226)
T d2feaa1 71 LEDAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 149 (226)
T ss_dssp HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred HhccchhHHHHHHHHHHHhcccccccCCcchh-hhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHH
Confidence 45577999999999999999999999999988 9999999999987776321 0012346677
Q ss_pred HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 113 FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 113 f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
...++++++++|++|+||||+.+|+.||++||+.
T Consensus 150 ~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~ 183 (226)
T d2feaa1 150 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 183 (226)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEE
T ss_pred HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEE
Confidence 8999999999999999999999999999999974
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.50 E-value=2.2e-14 Score=133.35 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=70.6
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHH-----------HHHcCCCCCCccee----ecCCCCHHHHHHHHH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQI-----------LNLINLNQYFSNKE----IYPGQKTTHFESLKK 118 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~-----------L~~lgL~~~Fd~ie----~~~~~Kp~~f~~ale 118 (538)
..+++++.+++. .+..+++.|+... ...... ++.+|+.++|+.+. ..+++.|++|..+++
T Consensus 96 ~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~ 170 (225)
T d2g80a1 96 APVYADAIDFIK----RKKRVFIYSSGSV-KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILR 170 (225)
T ss_dssp BCCCHHHHHHHH----HCSCEEEECSSCH-HHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHH
T ss_pred ccchhhHHHHHh----hHHhhhhhhhccc-hhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHhHHHHH
Confidence 334555555544 4466788888755 333322 34457788999862 223555699999999
Q ss_pred HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 119 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 119 ~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
++|++|++|+||||+..|+.+|+++||++|+|..
T Consensus 171 ~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r 204 (225)
T d2g80a1 171 DIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 204 (225)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred hcccCchhceeecCCHHHHHHHHHcCCEEEEEeC
Confidence 9999999999999999999999999999999974
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.50 E-value=1.6e-14 Score=136.33 Aligned_cols=106 Identities=14% Similarity=0.132 Sum_probs=86.9
Q ss_pred CCCccCCCHHHHHHHHHHCC-ceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCc--hHHHHHHHHHh---CC
Q psy8912 420 AIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQK--TTHFANLKKAT---GI 490 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~G-iklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k--~~~~~kal~~l---gi 490 (538)
....++||+.++|++|+++| ++++|+|++.+. .+...|+.+||.+||+...... ..| ++.+...++.+ ++
T Consensus 88 ~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~-~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~ 166 (228)
T d2hcfa1 88 EDITLLEGVRELLDALSSRSDVLLGLLTGNFEA-SGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 166 (228)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCHH-HHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred cCceecCchHHHHhhhhccccccccccCCCcch-hhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCC
Confidence 34678999999999999997 899999998754 7889999999999999533222 123 44555555555 89
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
+|++||||||+.+|+.+|+++|+.+|+|.+|....+
T Consensus 167 ~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~ 202 (228)
T d2hcfa1 167 SPSQIVIIGDTEHDIRCARELDARSIAVATGNFTME 202 (228)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHH
T ss_pred ChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHH
Confidence 999999999999999999999999999999866543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.49 E-value=2.2e-14 Score=133.33 Aligned_cols=108 Identities=9% Similarity=0.119 Sum_probs=92.2
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCchHHHHHHHHHhCCCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k~~~~~kal~~lgi~pe 493 (538)
.......++||+.++|+.|+.+ ++++++|+++. ..++..|+++|+..||+...... ..++++|..+++++|++|+
T Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~ 155 (210)
T d2ah5a1 78 KGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDT-STAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPE 155 (210)
T ss_dssp TGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGG
T ss_pred hhhhcccchhHHHHHHhhhhcc-cchhhcccccc-hhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccc
Confidence 3344678999999999999977 58999998865 58899999999999999432222 2568889999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
+|++|||+.+|+.+|+++|+++++|.+|.+..+
T Consensus 156 ~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~ 188 (210)
T d2ah5a1 156 QAIIIGDTKFDMLGARETGIQKLAITWGFGEQA 188 (210)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEESSSSSCHH
T ss_pred cceeecCCHHHHHHHHHcCCeEEEEcCCCCCHH
Confidence 999999999999999999999999999876543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=7.3e-14 Score=131.03 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=88.8
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee----c--CCchHHHHHHHHHhCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF----P--GQKTTHFANLKKATGI 490 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~----~--~~k~~~~~kal~~lgi 490 (538)
.......++||+.++|++|+++|++++|+|++... ..+..++.+|+.++|+..... . .+++..|..+++++|+
T Consensus 121 ~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~ 199 (253)
T d1zs9a1 121 AGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVE-AQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGC 199 (253)
T ss_dssp TTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTS
T ss_pred hhhcccccCCCHHHHHHHHhhccCceeecCCCcHH-HHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCC
Confidence 34445778999999999999999999999998754 778889999999998833221 1 2456679999999999
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|++|+||||+.+|+.+|+++|+++|.|.++
T Consensus 200 ~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~ 230 (253)
T d1zs9a1 200 STNNILFLTDVTREASAAEEADVHVAVVVRP 230 (253)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred CcCcEEEEeCCHHHHHHHHHcCCEEEEEeCC
Confidence 9999999999999999999999999999653
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.48 E-value=2.9e-14 Score=133.54 Aligned_cols=98 Identities=19% Similarity=0.210 Sum_probs=85.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|+.|+++|++++++|++. .+...++.+|+.+||+...... .++++.|+++++++|++|++|
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~---~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~ 165 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASK---NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCT---THHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred cccccCCceeccccccccccceEEEeecc---hhhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceE
Confidence 46789999999999999999999999874 3577899999999999432211 134677999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|+|||+..|+++|+++|+++|+|.++
T Consensus 166 l~VgD~~~di~~A~~aG~~~i~v~~~ 191 (221)
T d1o08a_ 166 IGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred EEEecCHHHHHHHHHcCCEEEEECCh
Confidence 99999999999999999999999874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.46 E-value=1.7e-14 Score=127.98 Aligned_cols=129 Identities=16% Similarity=0.012 Sum_probs=83.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNL 92 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~ 92 (538)
++|+|+||+||||.+..-.... .+ .......++||+.++|+.|+++|++++++||.+.. ......++.
T Consensus 6 kpk~vifDiDgTL~~~~~~~~~-----~~-----~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~ 75 (149)
T d1ltqa1 6 KPKAVIFDVDGTLAKMNGRGPY-----DL-----EKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM 75 (149)
T ss_dssp SCEEEEEETBTTTBCCSSCCTT-----CG-----GGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred CCcEEEEEcCCCcEeCCCCCcC-----Cc-----cccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH
Confidence 5799999999999432111000 00 01224578999999999999999999999998641 111222222
Q ss_pred cC-----C-CCCCccee---ecCCCC-HHHHHHHHHHcCCCCCc-EEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 93 IN-----L-NQYFSNKE---IYPGQK-TTHFESLKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 93 lg-----L-~~~Fd~ie---~~~~~K-p~~f~~ale~lgi~P~e-~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
.+ + ...++... .....+ +......+.++...+.+ +++|||+..||++|+++|++|+.|.+|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 76 TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 11 1 11222211 111123 35566777777766655 467899999999999999999999987
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.45 E-value=5.5e-14 Score=129.56 Aligned_cols=103 Identities=8% Similarity=0.055 Sum_probs=85.0
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CC--chHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQ--KTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~--k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++|+|+++. .+...|+++++.+||+...... .. +++.|+.+++++++ ++
T Consensus 76 ~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~--~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~ 151 (187)
T d2fi1a1 76 EHPILFEGVSDLLEDISNQGGRHFLVSHRND--QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SS 151 (187)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT--HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SS
T ss_pred hcCcccchhHHHHHHHHhhhccccccccCcc--chhhhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CC
Confidence 3578999999999999999999999998764 3456899999999999432211 13 46779999999986 45
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
||||||+..|+++|+++|++|+.|+++.+..+
T Consensus 152 ~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~ 183 (187)
T d2fi1a1 152 GLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQ 183 (187)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred eEEEeCCHHHHHHHHHcCCEEEEECCCCChHh
Confidence 99999999999999999999999987655443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.42 E-value=1.9e-13 Score=129.30 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=86.2
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|++ |++++++|++.. ...+..|+.+|+.+||+...... . ++++.|..+++++|++|++|
T Consensus 98 ~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~ 175 (230)
T d1x42a1 98 YGELYPEVVEVLKSLKG-KYHVGMITDSDT-EYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (230)
T ss_dssp HCCBCTTHHHHHHHHBT-TBEEEEEESSCH-HHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCcccccHHHHHHHhhc-cCceeeeecccc-ccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccc
Confidence 36789999999999974 799999998864 47888999999999999433221 2 44667999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+. +||++|+++|+.+++|.++...
T Consensus 176 l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~ 205 (230)
T d1x42a1 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEK 205 (230)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECTTSCC
T ss_pred ceeecCcHhHHHHHHHcCCEEEEECCCCCC
Confidence 9999985 7899999999999999876443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.39 E-value=4.2e-13 Score=124.95 Aligned_cols=99 Identities=16% Similarity=0.239 Sum_probs=86.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC---Cc--hHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG---QK--TTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~---~k--~~~~~kal~~lgi~pee~ 495 (538)
...++|++.++|+.|+++|++++++|++.. ...+..++.+++..|||....... .| ++.|+.+++++|++|++|
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~-~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~ 169 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 169 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHH-HHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence 467899999999999999999999999875 588889999999999994332221 34 566999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+||||+..|+++|+++|++++.|.+
T Consensus 170 l~VgD~~~Di~~A~~aG~~~v~v~r 194 (220)
T d1zrna_ 170 LFVASNAWDATGARYFGFPTCWINR 194 (220)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECT
T ss_pred EEEecChHhHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999964
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=4.3e-13 Score=127.32 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=81.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC--c----ce-----eecCCC--------CHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--S----NK-----EIYPGQ--------KTT 111 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F--d----~i-----e~~~~~--------Kp~ 111 (538)
.....++||+.++++.|+++|++++|+|++.. ..++.+++.+|++.+. . .. ...... |..
T Consensus 78 ~~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~-~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~ 156 (217)
T d1nnla_ 78 EQPPHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGK 156 (217)
T ss_dssp HSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHH
T ss_pred hhccccCHHHHHHHHHHHhCCCEEEEECCCch-HHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHH
Confidence 34577999999999999999999999999988 9999999999987431 1 00 000111 223
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
..+.+.+ +.++++|++|||+.+|+.+++.+|+. +++.......... ..+++++.+
T Consensus 157 ~v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~-va~~~~~~~~~~~-----~~ad~~i~~ 211 (217)
T d1nnla_ 157 VIKLLKE--KFHFKKIIMIGDGATDMEACPPADAF-IGFGGNVIRQQVK-----DNAKWYITD 211 (217)
T ss_dssp HHHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEE-EEECSSCCCHHHH-----HHCSEEESC
T ss_pred HHHHHHh--ccCccccEEEEeCHhhHHHHHhCCce-EEECCCHHHHHHH-----HhCCCEeCC
Confidence 4455444 35679999999999999999999985 5554332222221 246677654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.38 E-value=1.8e-13 Score=127.46 Aligned_cols=105 Identities=17% Similarity=0.109 Sum_probs=87.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc---hHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE---MLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~---~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p 492 (538)
...++||+.++|++|+++|++++++|++.. .......+..+|+.+|||...... .+.++.|+++++++|++|
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p 174 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKP 174 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCT
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCc
Confidence 467899999999999999999999997432 224566688899999999432221 145777999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
++||||||+..|+++|+++|+++|.|.++.+..
T Consensus 175 ~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 175 NEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp TSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred ceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 999999999999999999999999999886644
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.35 E-value=5.7e-13 Score=121.84 Aligned_cols=107 Identities=7% Similarity=0.038 Sum_probs=77.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------ch------HHHHHHHhhcCCcc---cccccee---ec--CCch
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------EM------LRAHQLVDLFNWNQ---HFDHKEI---FP--GQKT 478 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------~~------~~a~~~L~~lgL~~---yFd~~~i---~~--~~k~ 478 (538)
++.++|||.++|+.|+++|++++++|+.+ +. ......|+..|+.. ||..... .. .+.+
T Consensus 28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p 107 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKV 107 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSS
T ss_pred HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeecccccccccccccccc
Confidence 47899999999999999999999999753 11 12345566666643 4442111 11 2457
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC-CCHHHH
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG-MSHSVL 527 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg-~t~~~~ 527 (538)
.+++++++++|++|++|+||||+..|+++|++|||+++.|..+ .+|+..
T Consensus 108 ~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~~~~~~i 157 (161)
T d2fpwa1 108 KLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMI 157 (161)
T ss_dssp GGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTBCHHHH
T ss_pred HHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCCCCHHHH
Confidence 7799999999999999999999999999999999999999654 455543
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.34 E-value=8.8e-13 Score=136.06 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=100.9
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee------------------cCCCCHHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI------------------YPGQKTTHFESL 116 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~------------------~~~~Kp~~f~~a 116 (538)
.|+||+.++|+.|+++|++++++||.+. ..+...++.+|+.++|+...+ ..++.|++|..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~-~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 4567999999999999999999999988 999999999999999975311 123445778877
Q ss_pred HHH--------------cCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 117 KKA--------------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 117 le~--------------lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+.. +++.|++|+||||+.+|+.+|+++|+.+|+|.+|.......+++....+|+|+.+..
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~ 367 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLG 367 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHH
Confidence 754 467789999999999999999999999999999987766666666778999997643
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.33 E-value=3.2e-12 Score=116.91 Aligned_cols=120 Identities=21% Similarity=0.228 Sum_probs=91.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-------------eec--CCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-------------EIY--PGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-------------e~~--~~~Kp~~f~~ 115 (538)
.....+++++.+.++.|+.+|..++++|++.. ..........+...+|... ... +.+++.....
T Consensus 71 ~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (210)
T d1j97a_ 71 IKRITPTEGAEETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEK 149 (210)
T ss_dssp HHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHHHcCCEEEeeccccc-ccccchhhccchhhhhhhhhccccccccccccccccccccccchhhh
Confidence 45678899999999999999999999999977 8888888888887665533 001 1124577899
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhH
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHV 180 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~ 180 (538)
.++++++.|+++++|||+.+|+.+++.+|+. |++ .+ .. .. . ..+|+|+.. +..+++
T Consensus 150 ~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~-va~-na--~~-~l---k-~~Ad~vi~~~d~~~vl 206 (210)
T d1j97a_ 150 IAKIEGINLEDTVAVGDGANDISMFKKAGLK-IAF-CA--KP-IL---K-EKADICIEKRDLREIL 206 (210)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHHHCSEE-EEE-SC--CH-HH---H-TTCSEEECSSCGGGGG
T ss_pred HHHHhcccccceEEecCCcChHHHHHHCCCC-EEE-CC--CH-HH---H-HhCCEEEcCCCHHHHH
Confidence 9999999999999999999999999999985 455 32 22 22 2 257898865 334444
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=2.7e-13 Score=121.95 Aligned_cols=106 Identities=24% Similarity=0.330 Sum_probs=88.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc-CCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-NWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l-gL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
...+++|+.+++..++.+|++++++|++... .+...+..+ ++.+||+..... ..++++.|..+++++|++|++
T Consensus 82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~-~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~ 160 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRL-HTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD 160 (197)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCC-TTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred ccccCchhHHHHHHHHhcCCeEEEEeCccHH-HHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCe
Confidence 3578899999999999999999999988755 445556664 899999953322 125677799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
|+||||+.+|+++|+++|+++|.|....+..++
T Consensus 161 ~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~~ 193 (197)
T d2b0ca1 161 TVFFDDNADNIEGANQLGITSILVKDKTTIPDY 193 (197)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEECCCCCCHHh
Confidence 999999999999999999999999987665544
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.32 E-value=2.4e-12 Score=121.52 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=84.2
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCc--hHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQK--TTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k--~~~~~kal~~lgi~pee~ 495 (538)
...++|++.++|++|+ |++++++|+++.. .+...++++++.+|||.+.... ..| ++.|.++++++|++|++|
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~-~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~ 167 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPD-MLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHH-HHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred ccccchhhhHHHHHHh--hhceeEEeccchH-HHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhE
Confidence 4678999999999884 7899999998754 7888999999999999433322 134 567999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|||||+..||.+|+++|+++|.|...
T Consensus 168 l~VgD~~~di~~A~~aG~~tv~v~r~ 193 (245)
T d1qq5a_ 168 LFVSSNGFDVGGAKNFGFSVARVARL 193 (245)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred EEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 99999999999999999999999754
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.31 E-value=1e-12 Score=122.90 Aligned_cols=105 Identities=14% Similarity=0.097 Sum_probs=87.5
Q ss_pred hhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec--------CCchHHHHHHHH
Q psy8912 415 LDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP--------GQKTTHFANLKK 486 (538)
Q Consensus 415 ~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~--------~~k~~~~~kal~ 486 (538)
.........++||+.++|+.|+.+ .+++|++.. +.+...|+++|+.+||+...+.. .++++.|+++++
T Consensus 77 ~~~~~~~~~~~~g~~~~L~~l~~~---~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~ 152 (222)
T d2fdra1 77 DMRLERDVKIIDGVKFALSRLTTP---RCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAA 152 (222)
T ss_dssp HHHHHHHCCBCTTHHHHHHHCCSC---EEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHH
T ss_pred HHHhhhccchhhhHHHHhhhcccc---ceeeeecch-hhhhhhhcccccccccceeecccccccccccccCHHHHHHHHH
Confidence 334444678999999999988654 578998865 58899999999999999543321 234677999999
Q ss_pred HhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 487 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 487 ~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|++||||||+..|+++|+++|+.+|+|.+|..
T Consensus 153 ~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~ 189 (222)
T d2fdra1 153 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASH 189 (222)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred hhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCC
Confidence 9999999999999999999999999999999999864
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=5.4e-13 Score=123.02 Aligned_cols=104 Identities=19% Similarity=0.111 Sum_probs=84.9
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCch---HHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM---LRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGI 490 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~---~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi 490 (538)
.....++||+.++|++|+++|++++++|+.... ..........++.+|||.+... ..++++.|.++++++|+
T Consensus 95 ~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~ 174 (225)
T d1zd3a1 95 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 174 (225)
T ss_dssp HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred hhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence 345679999999999999999999999975432 2344456677888999943221 12456779999999999
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|++||||||+..|+++|+++|+++|.|.++.
T Consensus 175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 175 SPSEVVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred CccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999999999999999998753
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.30 E-value=2.5e-12 Score=122.06 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=81.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCc--hHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQK--TTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k--~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+ +|++++++|+++. ...+..|+.+|+.+||+...... ..| +..|.++++++|++|++
T Consensus 106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~ 183 (247)
T d2gfha1 106 QHMILADDVKAMLTELR-KEVRLLLLTNGDR-QTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD 183 (247)
T ss_dssp HTCCCCHHHHHHHHHHH-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred ccCccCccHHHHHHHhh-cccceEEeecccc-hhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHh
Confidence 44679999999999998 5899999998875 47788999999999999433221 134 66799999999999999
Q ss_pred EEEEeccc-ccHHhHcccCCEEEEE
Q psy8912 495 MVFFDDEE-RNSHDVSPLGVTCIHV 518 (538)
Q Consensus 495 ~l~~eDs~-~~I~aAk~aGi~~i~V 518 (538)
|++|||+. .|+.+|+++|++++.+
T Consensus 184 ~l~iGD~~~~Di~~A~~~G~~~~~~ 208 (247)
T d2gfha1 184 CVMVGDTLETDIQGGLNAGLKATVW 208 (247)
T ss_dssp EEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred cceeccChHhHHHHHHHcCCeEEEE
Confidence 99999996 7999999999986655
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.28 E-value=1.6e-12 Score=123.81 Aligned_cols=102 Identities=9% Similarity=-0.010 Sum_probs=76.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------c------hHHHHHHHhhcCCc--cccccce-----------ee
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------E------MLRAHQLVDLFNWN--QHFDHKE-----------IF 473 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------~------~~~a~~~L~~lgL~--~yFd~~~-----------i~ 473 (538)
++.++|||.++|++|+++|++++|+|+.+ . .+.....|+..|+. .+|.+.. ..
T Consensus 46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 125 (209)
T d2o2xa1 46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDH 125 (209)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSC
T ss_pred HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccc
Confidence 46799999999999999999999999632 0 01223345555532 2221100 00
Q ss_pred --cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 474 --PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 474 --~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
..+.+.++.+++++++++|++|+||||+..|+++|++|||.++.|.+|.
T Consensus 126 ~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 126 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred ccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence 1245677999999999999999999999999999999999999987764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=2.2e-11 Score=112.43 Aligned_cols=106 Identities=8% Similarity=0.083 Sum_probs=77.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch--------------HHHHHHHhhcCCcc---cccc----------cee-
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM--------------LRAHQLVDLFNWNQ---HFDH----------KEI- 472 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--------------~~a~~~L~~lgL~~---yFd~----------~~i- 472 (538)
++.++|||.++|+.|+++|++++++|+.+.- ......+...|+.- +|.. ...
T Consensus 25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~ 104 (182)
T d2gmwa1 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVC 104 (182)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCC
T ss_pred HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccc
Confidence 4679999999999999999999999976421 01222333333321 1100 000
Q ss_pred -ecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC-EEEEECCCCCHHH
Q psy8912 473 -FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV-TCIHVKDGMSHSV 526 (538)
Q Consensus 473 -~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi-~~i~V~dg~t~~~ 526 (538)
...+++.+++.++++++++|++++||||+.+|+++|++||+ .+++|.+|.....
T Consensus 105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~ 160 (182)
T d2gmwa1 105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITP 160 (182)
T ss_dssp SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCH
T ss_pred cccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCc
Confidence 11356778999999999999999999999999999999999 5688998865543
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.19 E-value=1.1e-11 Score=127.57 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=87.4
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec----------------C--CchHHHHHH
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP----------------G--QKTTHFANL 484 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~----------------~--~k~~~~~ka 484 (538)
.++|||.++|++|+++|++++++|+.+. ..++.+++++||.+||+...+.+ . +.+..|.++
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~-~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 4567999999999999999999999875 58999999999999998433321 1 234556666
Q ss_pred HH--------------HhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHH
Q psy8912 485 KK--------------ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLK 532 (538)
Q Consensus 485 l~--------------~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~ 532 (538)
+. .++++|++|+||||+.+|+.+||+||+.+|+|.+|.+-.+-.+-++
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~ 355 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELE 355 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHH
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHH
Confidence 54 3568899999999999999999999999999999987554333343
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.10 E-value=2e-10 Score=107.95 Aligned_cols=142 Identities=12% Similarity=0.023 Sum_probs=101.6
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
|+|+|+||+||||.+. ...+.|++.++|+.|++.|++++++|+++. ..+......++
T Consensus 2 miKli~~D~DGTL~~~----------------------~~~i~~~~~~al~~l~~~g~~v~~~TGr~~-~~~~~~~~~~~ 58 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTDR----------------------DRLISTKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIFLG 58 (225)
T ss_dssp CCCEEEEEHHHHSBCT----------------------TSCBCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHT
T ss_pred CeEEEEEecCCCCcCC----------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCch-hhhHHHHHHcC
Confidence 7999999999999751 345667889999999999999999999877 66777777665
Q ss_pred CCCCCc--------------------------------------------------------------------------
Q psy8912 95 LNQYFS-------------------------------------------------------------------------- 100 (538)
Q Consensus 95 L~~~Fd-------------------------------------------------------------------------- 100 (538)
+...+-
T Consensus 59 ~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 138 (225)
T d1l6ra_ 59 INGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFY 138 (225)
T ss_dssp CCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEE
T ss_pred CCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEE
Confidence 532100
Q ss_pred ---ceeecC--CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-
Q psy8912 101 ---NKEIYP--GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD- 174 (538)
Q Consensus 101 ---~ie~~~--~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d- 174 (538)
.+++.+ ..|....+.+++++|+++++|++|||+.+|+.+.+.+|. +|.|.++ .+. .+. .+|+|+..
T Consensus 139 ~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~-~vav~na--~~~-~k~----~ad~v~~~~ 210 (225)
T d1l6ra_ 139 SGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVR-KACPANA--TDN-IKA----VSDFVSDYS 210 (225)
T ss_dssp ETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSE-EEECTTS--CHH-HHH----HCSEECSCC
T ss_pred CCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCe-EEEECCC--cHH-HHH----hCCEEECCC
Confidence 000111 134566888999999999999999999999999999996 4556543 233 222 36777755
Q ss_pred CchhhHHhhhhcC
Q psy8912 175 DEQEHVNDISKLG 187 (538)
Q Consensus 175 ~~~~~~~~i~~~g 187 (538)
....+.+.+++.+
T Consensus 211 ~~~gi~~~l~~~~ 223 (225)
T d1l6ra_ 211 YGEEIGQIFKHFE 223 (225)
T ss_dssp TTHHHHHHHHHTT
T ss_pred CcCHHHHHHHHhC
Confidence 3455666666543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.07 E-value=6.8e-11 Score=110.62 Aligned_cols=97 Identities=5% Similarity=-0.029 Sum_probs=80.4
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccce------------------eecCCchH
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE------------------IFPGQKTT 479 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~------------------i~~~~k~~ 479 (538)
....++++||+.++|++|+++|++++++|++.+. .++.+|+++|+.+||.+.. .....++.
T Consensus 70 ~~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~-~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 70 VLEDAKIREGFREFVAFINEHEIPFYVISGGMDF-FVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp HHHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHH-HHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred HHhccchhHHHHHHHHHHHhcccccccCCcchhh-hHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHH
Confidence 3345789999999999999999999999998754 8999999999998874110 01123555
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
...+++++++++|++|+||||+.+|+.+|++||+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence 678999999999999999999999999999999743
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.06 E-value=3.4e-10 Score=104.89 Aligned_cols=130 Identities=14% Similarity=0.035 Sum_probs=94.3
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||... .-.+.+.+.++|++|+++|++++++|+++. ..++..+...+
T Consensus 1 kiK~i~~D~DGTL~~~----------------------~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~-~~~~~~~~~~~ 57 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP----------------------NRMIHEKALEAIRRAESLGIPIMLVTGNTV-QFAEAASILIG 57 (230)
T ss_dssp CCCEEEEESTTTTBCT----------------------TSCBCHHHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHHT
T ss_pred CceEEEEecCCCCcCC----------------------CCccCHHHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHhcC
Confidence 4799999999999751 234567788999999999999999999977 77777766654
Q ss_pred CCCCCc--------------------------------------------------------------------------
Q psy8912 95 LNQYFS-------------------------------------------------------------------------- 100 (538)
Q Consensus 95 L~~~Fd-------------------------------------------------------------------------- 100 (538)
+...+-
T Consensus 58 ~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (230)
T d1wr8a_ 58 TSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVA 137 (230)
T ss_dssp CCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEE
T ss_pred CCcccccccceeeeccccccccccccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEE
Confidence 421100
Q ss_pred -----ceeec--CCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEe
Q psy8912 101 -----NKEIY--PGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYF 173 (538)
Q Consensus 101 -----~ie~~--~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~ 173 (538)
.+++. +.+|+..+..+++++|++|+++++|||+.+|+.+.+.+|. .|.|.++ ... .+ ..+++|..
T Consensus 138 ~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~-~vav~na--~~~-~k----~~A~~v~~ 209 (230)
T d1wr8a_ 138 VDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGY-KVAVAQA--PKI-LK----ENADYVTK 209 (230)
T ss_dssp EECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSE-EEECTTS--CHH-HH----TTCSEECS
T ss_pred eeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCe-EEEECCC--CHH-HH----HhCCEEEC
Confidence 00111 1245677899999999999999999999999999999997 4556443 222 22 24678776
Q ss_pred CC
Q psy8912 174 DD 175 (538)
Q Consensus 174 d~ 175 (538)
..
T Consensus 210 ~~ 211 (230)
T d1wr8a_ 210 KE 211 (230)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.00 E-value=2.5e-10 Score=100.52 Aligned_cols=128 Identities=12% Similarity=0.024 Sum_probs=81.3
Q ss_pred CccceEEeecCC--CCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchH--HHHHH
Q psy8912 382 KYKDMVFFDDEE--RNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEML--RAHQL 457 (538)
Q Consensus 382 ~~~~l~~~Dldh--~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a~~~ 457 (538)
..|..++||+|. -+.+.-.+|. .+. -.+..++|||.++|+.|+++|++++++|+.+... .+..-
T Consensus 5 ~kpk~vifDiDgTL~~~~~~~~~~-----------~~~-~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~ 72 (149)
T d1ltqa1 5 GKPKAVIFDVDGTLAKMNGRGPYD-----------LEK-CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKY 72 (149)
T ss_dssp TSCEEEEEETBTTTBCCSSCCTTC-----------GGG-GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHH
T ss_pred CCCcEEEEEcCCCcEeCCCCCcCC-----------ccc-cccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHH
Confidence 568899999991 2222222222 111 1235689999999999999999999999875321 11222
Q ss_pred HhhcCC------ccccccceeecC----CchHHHHHHHHHhCCCCCcE-EEEecccccHHhHcccCCEEEEECCC
Q psy8912 458 VDLFNW------NQHFDHKEIFPG----QKTTHFANLKKATGIEYKDM-VFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 458 L~~lgL------~~yFd~~~i~~~----~k~~~~~kal~~lgi~pee~-l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|+..+. ..+++....... .+.......+.++..++.++ ++|||+..|+++|+++|++|+.|.||
T Consensus 73 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 73 YRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 322110 122221111111 22344566777777776665 66899999999999999999999998
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=7e-10 Score=106.49 Aligned_cols=201 Identities=12% Similarity=0.048 Sum_probs=117.5
Q ss_pred cccccccccc---ccccchHHHHHHhhhcCcceeeeccc--cccchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 303 RVEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRT--VHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 303 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
-+-|-+|||. .++|.+.+.++.|+++|++..+++=. .+.+...+.+..+|+. ....+|+++..-+.++...+.
T Consensus 6 VifDlDGTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~--~~~~~i~~~~~~~~~~l~~~~ 83 (250)
T d2c4na1 6 VICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD--VPDSVFYTSAMATADFLRRQE 83 (250)
T ss_dssp EEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC--CCGGGEEEHHHHHHHHHHTSS
T ss_pred EEEECCCeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc--ccceeEechHHHHHHHHHhhh
Confidence 4678899996 57889999999999999999997521 2344556667888985 234567776545555554332
Q ss_pred CcCCCccceEEeecC---------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCH--HHHHHHHHHCCceEEEEe
Q psy8912 378 DSKIKYKDMVFFDDE---------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDV--PAILKYLKQNNCLVAAAS 446 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld---------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv--~e~L~~Lk~~GiklaIAS 446 (538)
..+ +.+.--+ +....+..|...+ ... ...++.. ...+..++ +....+++
T Consensus 84 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~ 143 (250)
T d2c4na1 84 GKK-----AYVVGEGALIHELYKAGFTITDVNPDFVI---------VGE----TRSYNWDMMHKAAYFVA--NGARFIAT 143 (250)
T ss_dssp CCE-----EEEECCTHHHHHHHHTTCEECSSSCSEEE---------ECC----CTTCCHHHHHHHHHHHH--TTCEEEES
T ss_pred ccc-----ccccCCHHHHHHHHHhhhhccccccceee---------ccC----CcccchHHHHHHHHHHh--cccccccc
Confidence 221 2222111 2222222222211 000 1112222 22233333 33455666
Q ss_pred CCCchHHHHHHHhhcCCccccccc-----eeecCCchHHHHHHHHHhCCCCCcEEEEecccc-cHHhHcccCCEEEEECC
Q psy8912 447 RTTEMLRAHQLVDLFNWNQHFDHK-----EIFPGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 447 ss~~~~~a~~~L~~lgL~~yFd~~-----~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~-~I~aAk~aGi~~i~V~d 520 (538)
+.+.... ...+....+.++|... .....+.+..|..+++++|++|+||++|||+.. ||..|+++|+++|.|.+
T Consensus 144 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~ 222 (250)
T d2c4na1 144 NPDTHGR-GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLS 222 (250)
T ss_dssp CCCSBSS-TTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred ccccccC-ceeecCcchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECC
Confidence 5543210 0011111123344311 112235577799999999999999999999965 99999999999999999
Q ss_pred CCCHHH
Q psy8912 521 GMSHSV 526 (538)
Q Consensus 521 g~t~~~ 526 (538)
|...++
T Consensus 223 G~~~~~ 228 (250)
T d2c4na1 223 GVSSLD 228 (250)
T ss_dssp SSCCGG
T ss_pred CCCCHH
Confidence 976554
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.90 E-value=1.6e-09 Score=98.27 Aligned_cols=125 Identities=12% Similarity=0.096 Sum_probs=91.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---------eecCCCCHHHHHHHHHHcC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------EIYPGQKTTHFESLKKATG 121 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---------e~~~~~Kp~~f~~ale~lg 121 (538)
.......++....+..++ .+++.+++|.... .........++...++... ......++......++.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (206)
T d1rkua_ 65 IATLKPLEGAVEFVDWLR-ERFQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK 142 (206)
T ss_dssp HTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred hhhccccchHHHHHHHhh-cCceEEEeccCch-HHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhc
Confidence 455677889988887775 6799999999877 8888888888876554322 1112234556677889999
Q ss_pred CCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 122 IEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 122 i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
+++++|++|||+.+|+.+.+.||.. |+++. .....+ ..++++.....+++...+.+
T Consensus 143 i~~~eviaiGDg~NDi~Ml~~Ag~g-IAmna---~~~v~~----~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 143 SLYYRVIAAGDSYNDTTMLSEAHAG-ILFHA---PENVIR----EFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp HTTCEEEEEECSSTTHHHHHHSSEE-EEESC---CHHHHH----HCTTSCEECSHHHHHHHHHH
T ss_pred ccccceEEecCCccCHHHHHhCCcc-EEECC---CHHHHH----hCCCceeecCHHHHHHHHHH
Confidence 9999999999999999999999996 44532 223222 35778777777777765554
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.88 E-value=1.6e-09 Score=101.77 Aligned_cols=123 Identities=16% Similarity=0.197 Sum_probs=84.5
Q ss_pred CCCceEEEeCCCCCChhhH-hhhhchhHHHHHHHHhhhcCCCc-cCCCHHHHHHHhhhCCceEEEEcCCCcH--------
Q psy8912 14 KFPKMVVFDLDYTLWPLHV-HDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI-------- 83 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~-~~~i~~~~~~~~~i~~~~~~~~~-l~pgv~elL~~Lk~~GikiaIvTn~~~p-------- 83 (538)
+.-|+++||.||||+...- ..+. ....... ++|++.+.|+.|+++|+.++|+||.+..
T Consensus 19 ~~~Kia~fDrDGtLik~~~~~~~~------------~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~ 86 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITTRSGKVFP------------TSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAE 86 (195)
T ss_dssp CCSCEEEECSBTTTEECSSSCSSC------------SSTTCCEESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHH
T ss_pred CcCcEEEEECCCceEeeCCCCcCC------------CChhhceeccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHH
Confidence 3458999999999964210 0000 0122334 4799999999999999999999996321
Q ss_pred ---HHHHHHHHHcCCCCCC-cce--eecCCCCHHHHHHHHHHcC----CCCCcEEEEeCCc-----------------cc
Q psy8912 84 ---LHAKQILNLINLNQYF-SNK--EIYPGQKTTHFESLKKATG----IEYKDMVFFDDEE-----------------RN 136 (538)
Q Consensus 84 ---~~~~~~L~~lgL~~~F-d~i--e~~~~~Kp~~f~~ale~lg----i~P~e~L~IGDs~-----------------~D 136 (538)
...+.+++.++....+ -.. ....++.|.++..++++++ ++.++++||||.. .|
T Consensus 87 ~~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD 166 (195)
T d1yj5a1 87 VFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCAD 166 (195)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHH
T ss_pred HHHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhH
Confidence 2345566666654211 110 1123345689999999875 8889999999954 89
Q ss_pred HHHHhhcCCeEE
Q psy8912 137 SHDVSPLGVTCI 148 (538)
Q Consensus 137 I~aAk~aG~~tI 148 (538)
++.|.++|++..
T Consensus 167 ~~fA~N~gikF~ 178 (195)
T d1yj5a1 167 RLFALNVGLPFA 178 (195)
T ss_dssp HHHHHHHTCCEE
T ss_pred HHHHHHCCCccc
Confidence 999999999964
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.87 E-value=9.8e-10 Score=105.62 Aligned_cols=202 Identities=12% Similarity=0.062 Sum_probs=111.8
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeec---cccccchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALAS---RTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
+-|-.|||. +++|++.+.++.|++.|++.+++| +.+.-..++.|-..+++.. ...++|++..-+.++.+-+.
T Consensus 6 lFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~--~~~~i~~~~~~~~~~l~~~~ 83 (253)
T d1wvia_ 6 LIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKT--PLETIYTATLATIDYMNDMK 83 (253)
T ss_dssp EEECBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCC--CGGGEEEHHHHHHHHHHHHC
T ss_pred EEcCcCceEECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCccc--cccccccHHHHHHHHHHHhc
Confidence 568899994 568999999999999999999975 2222234444444455543 35577877433333332222
Q ss_pred CcCCCccceEEeecC-------CCCc--CCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCC
Q psy8912 378 DSKIKYKDMVFFDDE-------ERNA--RSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 448 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld-------h~~~--s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss 448 (538)
..+ .+.++--+ +.+. ....|...+ ... ...++-....+..+..++.+..|+|+.
T Consensus 84 ~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~~i~tn~ 146 (253)
T d1wvia_ 84 RGK----TAYVIGETGLKKAVAEAGYREDSENPAYVV----------VGL---DTNLTYEKLTLATLAIQKGAVFIGTNP 146 (253)
T ss_dssp CCS----EEEEESCHHHHHHHHHTTCEECSSSCSEEE----------ECC---CTTCBHHHHHHHHHHHHTTCEEEESCC
T ss_pred cCc----eeeeccchHHHHHHHHcCCcccccccceEE----------Eec---CCCcCHHHHHHHhhhhhhccccccCCC
Confidence 111 11111101 0000 000011100 000 011222334444455566777788875
Q ss_pred CchHHHHHHHhhcC---Ccccccc-----ceeecCCchHHHHHHHHHhCCCCCcEEEEecccc-cHHhHcccCCEEEEEC
Q psy8912 449 TEMLRAHQLVDLFN---WNQHFDH-----KEIFPGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVK 519 (538)
Q Consensus 449 ~~~~~a~~~L~~lg---L~~yFd~-----~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~-~I~aAk~aGi~~i~V~ 519 (538)
... .....-...+ +..++.. ......+.+..|..+++++|++|++|+||||+.. ||.+|+++|+++|.|.
T Consensus 147 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 147 DLN-IPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp CSE-EEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred Cce-eEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 421 1000000011 1111110 0111234477799999999999999999999965 9999999999999999
Q ss_pred CCCCHH
Q psy8912 520 DGMSHS 525 (538)
Q Consensus 520 dg~t~~ 525 (538)
+|....
T Consensus 226 ~G~~~~ 231 (253)
T d1wvia_ 226 TGFTKP 231 (253)
T ss_dssp SSSSCT
T ss_pred CCCCCH
Confidence 986543
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.81 E-value=1.4e-08 Score=97.53 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=47.4
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
||+|+||+||||... .-.+-+.+.+.|++|+++|++++++|+++. ..+...++.+++
T Consensus 1 iKli~~DlDGTLl~~----------------------~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~-~~~~~~~~~l~~ 57 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS----------------------KHQVSLENENALRQAQRDGIEVVVSTGRAH-FDVMSIFEPLGI 57 (285)
T ss_dssp CCEEEEECCCCCSCT----------------------TSCCCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHGGGTC
T ss_pred CeEEEEECCccccCC----------------------CCccCHHHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHhCC
Confidence 689999999999851 223457788999999999999999999877 777777777765
Q ss_pred C
Q psy8912 96 N 96 (538)
Q Consensus 96 ~ 96 (538)
.
T Consensus 58 ~ 58 (285)
T d1nrwa_ 58 K 58 (285)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.77 E-value=3.6e-08 Score=94.13 Aligned_cols=201 Identities=10% Similarity=0.084 Sum_probs=109.7
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeec---cccccchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALAS---RTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
+-|-.|||. ..+|++.+.+++|++.|++..++| ..+....+..|..++++.- ...+++++..-...|.+-+.
T Consensus 6 ~fDlDGTL~~~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~--~~~~i~~~~~~~~~~l~~~~ 83 (253)
T d1yv9a1 6 LIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV--PASLVYTATLATIDYMKEAN 83 (253)
T ss_dssp EECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC--CGGGEEEHHHHHHHHHHHHC
T ss_pred EEcCCCccEeCCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCcc--ccccccCHHHHHHHHHHhcc
Confidence 568899995 447888899999999999999986 2334556666777777653 23466666433333322111
Q ss_pred CcCCCccceEEeecC---------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCC
Q psy8912 378 DSKIKYKDMVFFDDE---------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 448 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld---------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss 448 (538)
......+..-+ ..+.....|.... .. ...-++.....+..+...+.+..++++.
T Consensus 84 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~i~~n~ 146 (253)
T d1yv9a1 84 ----RGKKVFVIGEAGLIDLILEAGFEWDETNPDYVV---------VG----LDTELSYEKVVLATLAIQKGALFIGTNP 146 (253)
T ss_dssp ----CCSEEEEESCHHHHHHHHHTTCEECSSSCSEEE---------EC----CCTTCCHHHHHHHHHHHHTTCEEEESCC
T ss_pred ----CCCeEEecccchhhhhhhhhcccccccCcceEE---------Ee----ccCcccHHHhhhhhhhhccccceeeecC
Confidence 11111111111 1111111111110 00 0000111222222333333455677654
Q ss_pred CchHHHH---HHHhhcCCccccc---cc--eeecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEEC
Q psy8912 449 TEMLRAH---QLVDLFNWNQHFD---HK--EIFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 449 ~~~~~a~---~~L~~lgL~~yFd---~~--~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~ 519 (538)
+.- ... .......+..+|. .. .....+++..|.++++++|++|++|++|||+. +||+.|++||+++++|.
T Consensus 147 d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~ 225 (253)
T d1yv9a1 147 DKN-IPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVT 225 (253)
T ss_dssp CSE-EEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred Ccc-ccccCceeeecccccccccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEEC
Confidence 311 000 0000000112222 11 11233567779999999999999999999996 59999999999999999
Q ss_pred CCCCH
Q psy8912 520 DGMSH 524 (538)
Q Consensus 520 dg~t~ 524 (538)
+|.+.
T Consensus 226 ~G~~~ 230 (253)
T d1yv9a1 226 SGFTP 230 (253)
T ss_dssp TSSSC
T ss_pred CCCCC
Confidence 98764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.76 E-value=2.7e-08 Score=92.69 Aligned_cols=57 Identities=16% Similarity=0.165 Sum_probs=47.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
|+|+|+||+||||++.. . .+.+.+.|++|+++|+.++++|+++. ..+...++.++
T Consensus 1 miKli~~DlDGTLl~~~---------------------~---~~~~~~ai~~l~~~G~~~~~aTGR~~-~~~~~~~~~~~ 55 (243)
T d1wzca1 1 MIRLIFLDIDKTLIPGY---------------------E---PDPAKPIIEELKDMGFEIIFNSSKTR-AEQEYYRKELE 55 (243)
T ss_dssp CEEEEEECCBTTTBSSS---------------------C---SGGGHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHHT
T ss_pred CcEEEEEeCCCCCCCCC---------------------C---CHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHhc
Confidence 68999999999998621 1 24477999999999999999999988 88888888886
Q ss_pred CC
Q psy8912 95 LN 96 (538)
Q Consensus 95 L~ 96 (538)
+.
T Consensus 56 ~~ 57 (243)
T d1wzca1 56 VE 57 (243)
T ss_dssp CC
T ss_pred cc
Confidence 53
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=3.2e-08 Score=91.15 Aligned_cols=58 Identities=22% Similarity=0.200 Sum_probs=48.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+-+|++|+||||++. .-.+.+.+.++|++|+++|++++++|+++. ..+...++.+++
T Consensus 4 ~~li~~DlDGTLl~~----------------------~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~-~~~~~~~~~~~~ 60 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS----------------------HSYDWQPAAPWLTRLREANVPVILCSSKTS-AEMLYLQKTLGL 60 (232)
T ss_dssp CEEEEEECTTTTSCS----------------------SCCSCCTTHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHTTC
T ss_pred CEEEEEECCCCccCC----------------------cCcCCHHHHHHHHHHHHCCCEEEEEeCCCh-hhchhHHHHhcc
Confidence 457888999999861 234667899999999999999999999988 888888888876
Q ss_pred C
Q psy8912 96 N 96 (538)
Q Consensus 96 ~ 96 (538)
.
T Consensus 61 ~ 61 (232)
T d1xvia_ 61 Q 61 (232)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.75 E-value=6.4e-09 Score=95.55 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=71.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHH-----------HHHhhcCCccccccceee----cCCchHHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH-----------QLVDLFNWNQHFDHKEIF----PGQKTTHFANLK 485 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~-----------~~L~~lgL~~yFd~~~i~----~~~k~~~~~kal 485 (538)
...+++++.+++. .+..+++.|+.... ... ..++.+||.+||+.+... ..+.++.|+.++
T Consensus 95 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~ 169 (225)
T d2g80a1 95 KAPVYADAIDFIK----RKKRVFIYSSGSVK-AQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANIL 169 (225)
T ss_dssp CBCCCHHHHHHHH----HCSCEEEECSSCHH-HHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHH
T ss_pred cccchhhHHHHHh----hHHhhhhhhhccch-hhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHhHHHH
Confidence 3456677777664 45677888876532 211 235778999999943221 124466799999
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+++|++|++|+||||+..|+.+|+++|+++|.|..
T Consensus 170 ~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r 204 (225)
T d2g80a1 170 RDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 204 (225)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred HhcccCchhceeecCCHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999974
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.72 E-value=1.2e-08 Score=97.49 Aligned_cols=69 Identities=12% Similarity=0.046 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
|-..+..+++++|++++++++|||+.+|+.+.+.+|.. +.+.++. .+ ++. .+++|... .++.....+++
T Consensus 191 K~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~-vam~Na~--~~-lk~----~A~~v~~~~~~~Gva~~i~~ 260 (269)
T d1rlma_ 191 KANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNAA--EN-IKQ----IARYATDDNNHEGALNVIQA 260 (269)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTCC--HH-HHH----HCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeE-EEeCCCC--HH-HHH----hCCEEcCCCCccHHHHHHHH
Confidence 44568899999999999999999999999999999885 4465543 22 222 24677654 34445555554
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=3.1e-08 Score=94.48 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=46.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|+||+||||+.. .-.+.|.+.++|++|+++|++++++|+++. ..+...++.+++
T Consensus 4 iKli~~DlDGTL~~~----------------------~~~i~~~~~~al~~L~~~gi~v~i~TGR~~-~~~~~~~~~l~l 60 (271)
T d1rkqa_ 4 IKLIAIDMDGTLLLP----------------------DHTISPAVKNAIAAARARGVNVVLTTGRPY-AGVHNYLKELHM 60 (271)
T ss_dssp CCEEEECCCCCCSCT----------------------TSCCCHHHHHHHHHHHHTTCEEEEECSSCG-GGTHHHHHHTTC
T ss_pred eeEEEEeCCccccCC----------------------CCccCHHHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHhcC
Confidence 799999999999751 234557789999999999999999999877 777777777654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=2.1e-08 Score=94.69 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=85.7
Q ss_pred CceEEEeCCCCCChhh---Hh---hhhc------hhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH
Q psy8912 16 PKMVVFDLDYTLWPLH---VH---DLVA------PFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~---~~---~~i~------~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p 83 (538)
+.+|+||+|.|+.+.. .. .+.+ .-...|............+.||+.++++.++++|++|+.+||....
T Consensus 35 P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 35 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPT 114 (209)
T ss_dssp CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCchh
Confidence 5699999999995432 11 1111 0112223333333445678899999999999999999999997542
Q ss_pred --HHHHHHH-HHcCCCCCCcceeecCCCCH--HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 84 --LHAKQIL-NLINLNQYFSNKEIYPGQKT--THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 84 --~~~~~~L-~~lgL~~~Fd~ie~~~~~Kp--~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
+.....| +.+|+...-..-..+.+.++ ..-+..++++++ .+++||...|+.+|+++|+++|-+..
T Consensus 115 ~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 115 KTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp SSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred hHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeec
Confidence 3344455 45887532211112222222 112233366787 89999999999999999999999854
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=2.2e-08 Score=94.14 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=71.4
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc------c----cceee---c------CCchHH
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF------D----HKEIF---P------GQKTTH 480 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF------d----~~~i~---~------~~k~~~ 480 (538)
..+.++||+.+++++|+++|++++|+|++..+ .++.+++.+|+..++ . ....+ . ..|...
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~-~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~ 157 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRS-IVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV 157 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHH-HHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECCCchH-HHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHH
Confidence 34679999999999999999999999999865 899999999997532 1 00000 0 013333
Q ss_pred HHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEEC
Q psy8912 481 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 481 ~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
...+.+ +.++++|++|||+.+|+.+++.||+.+ ++.
T Consensus 158 v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~ 193 (217)
T d1nnla_ 158 IKLLKE--KFHFKKIIMIGDGATDMEACPPADAFI-GFG 193 (217)
T ss_dssp HHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEEE-EEC
T ss_pred HHHHHh--ccCccccEEEEeCHhhHHHHHhCCceE-EEC
Confidence 343333 467899999999999999999999864 553
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.66 E-value=3.3e-08 Score=94.40 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhhcC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISKLG 187 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~~g 187 (538)
|....+.+++++|++++++++|||+.+|+.+.+.+|. ++.|.++. .. .+. .+++|... ..+.+.+.+++.+
T Consensus 187 K~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na~--~~-lk~----~A~~vt~~~~~~Gv~~~l~~~~ 258 (260)
T d2rbka1 187 KQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQAK--ED-VKA----AADYVTAPIDEDGISKAMKHFG 258 (260)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSC--HH-HHH----HSSEECCCGGGTHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCCC--HH-HHH----hCCEEeCCCCccHHHHHHHHhC
Confidence 4456889999999999999999999999999999998 56676543 23 222 24566654 3555666666654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.60 E-value=2e-08 Score=90.97 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=78.2
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee----------e-----cCCchHHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----------F-----PGQKTTHFANLK 485 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i----------~-----~~~k~~~~~kal 485 (538)
...+++|+.++++.|+.+|+.+.++|++.. ..+....+..++..+|..... . ...+.......+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeeccccc-ccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence 467899999999999999999999998864 488888999998887751110 0 012455588888
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
++++++|+++++|||+.+|+..++.||+.+ ++
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~v-a~ 183 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKKAGLKI-AF 183 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHHCSEEE-EE
T ss_pred HHhcccccceEEecCCcChHHHHHHCCCCE-EE
Confidence 999999999999999999999999999864 45
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.60 E-value=4.1e-08 Score=90.45 Aligned_cols=138 Identities=15% Similarity=0.104 Sum_probs=95.4
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+++||+||||.+..+..- .. + +....+.+.++ ..++.|+..|+.++++|.... ..+......+++
T Consensus 5 ik~~i~DvDGVlTDG~v~~~-~d-----G----~e~k~F~~~Dg--~gi~~l~~~gi~~~iis~~~~-~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 5 IKFVITDVDGVLTDGQLHYD-AN-----G----EAIKSFHVRDG--LGIKMLMDADIQVAVLSGRDS-PILRRRIADLGI 71 (177)
T ss_dssp CCEEEEECTTTTSCSEEEEE-TT-----E----EEEEEEEHHHH--HHHHHHHHTTCEEEEEESCCC-HHHHHHHHHHTC
T ss_pred CeEEEEccCCcccCCeEEEe-CC-----C----CEEEEEECcch--HHHHHHhhhcEEEEEecCCch-hHHHHHHhhhcc
Confidence 89999999999954211000 00 0 00001111122 258889999999999999988 888888888887
Q ss_pred CCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 96 NQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 96 ~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
...+.. ...|...+..+++++|++|++|+||||..+|+.+-+.+|.. +.+.++. ... ...+++|....
T Consensus 72 ~~~~~~----~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~s-iap~nA~--~~v-----k~~A~~Vt~~~ 139 (177)
T d1k1ea_ 72 KLFFLG----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTS-FAVADAP--IYV-----KNAVDHVLSTH 139 (177)
T ss_dssp CEEEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HHH-----HTTSSEECSSC
T ss_pred cccccc----cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeE-EEcCCcc--HHH-----HHhCCEEeCCC
Confidence 554433 34566788999999999999999999999999999999985 4444432 221 23578888775
Q ss_pred chh
Q psy8912 176 EQE 178 (538)
Q Consensus 176 ~~~ 178 (538)
++.
T Consensus 140 GG~ 142 (177)
T d1k1ea_ 140 GGK 142 (177)
T ss_dssp TTT
T ss_pred CCC
Confidence 443
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.56 E-value=8e-08 Score=91.48 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
|......+++.++++++++++|||+.+|+.+.+.+|. ++.+.++. .+. +. .+++|+..
T Consensus 208 K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~-~va~~na~--~~~-k~----~a~~v~~~ 265 (283)
T d2b30a1 208 KYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY-SFAVANAT--DSA-KS----HAKCVLPV 265 (283)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE-EEECTTCC--HHH-HH----HSSEECSS
T ss_pred hHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCc-EEEeCCCC--HHH-HH----hCCEEECC
Confidence 3445788889999999999999999999999999996 45565543 232 22 34777754
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.47 E-value=4.1e-07 Score=86.94 Aligned_cols=69 Identities=12% Similarity=0.219 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
|....+.+++++|++++++++|||+.+|+.+.+.+|. +|.+.++. .+. +. .+++|+.+ ..+.....+++
T Consensus 191 K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~-sva~~na~--~~~-k~----~A~~i~~~~~~~Gva~~i~~ 260 (267)
T d1nf2a_ 191 KGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL-RVAMENAI--EKV-KE----ASDIVTLTNNDSGVSYVLER 260 (267)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE-EEECTTSC--HHH-HH----HCSEECCCTTTTHHHHHHTT
T ss_pred hhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCc-EEEeCCCC--HHH-HH----hCCEEcCCCCccHHHHHHHH
Confidence 4456888999999999999999999999999999997 46665543 332 22 35777654 34445555554
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.42 E-value=1.5e-06 Score=82.72 Aligned_cols=52 Identities=13% Similarity=0.141 Sum_probs=46.3
Q ss_pred CCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECCCCCHHH
Q psy8912 475 GQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 475 ~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
.+.+..|..+++++|++|++|++|||+. +||..|+++|+++|.|.+|.+...
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~ 237 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPE 237 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHH
Confidence 3567779999999999999999999995 699999999999999999966543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.40 E-value=3.9e-07 Score=85.60 Aligned_cols=44 Identities=9% Similarity=-0.011 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|......+++++|++++++++|||+.+|+.+-+.+|. .+.|.+.
T Consensus 163 K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~na 206 (244)
T d1s2oa1 163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNA 206 (244)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTC
T ss_pred hhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeCCC
Confidence 4455889999999999999999999999999999985 5556543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.32 E-value=4e-06 Score=73.49 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=87.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+.+++||.+||+.. ...-.+.|++.+.++.|++.|++++++|+-.. ..+..+.+.+|+
T Consensus 3 ~~~~~~d~~~~~~~---------------------g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~-~~a~~ia~~lgI 60 (135)
T d2b8ea1 3 VTAVIFDKTGTLTK---------------------GKPDTLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNL 60 (135)
T ss_dssp CCEEEEECCCCCBC---------------------SCCCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTC
T ss_pred EEEEEECCceEEEE---------------------ecCCCCCccHHHHHHHHHHcCCEEEEEcCcch-hhhhHHHhhhhh
Confidence 56899999999953 11345889999999999999999999998877 899999999998
Q ss_pred CCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 96 NQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 96 ~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+.+|.. ..|+--....+++.-. ..+.|+||+.+|..+-+.+++. +.+..+.. .....+|+++.+.
T Consensus 61 ~~v~~~------~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advg-ia~~~~~~-------~~~~aADivl~~~ 125 (135)
T d2b8ea1 61 DLVIAE------VLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSD-------VAVESGDIVLIRD 125 (135)
T ss_dssp SEEECS------CCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEE-EEECCC---------------SEEESSC
T ss_pred hhhccc------cchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCee-eecCccCH-------HHHHhCCEEEECC
Confidence 655543 4454333344444433 5789999999999999999875 44544331 2344678887653
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.14 E-value=6.7e-06 Score=75.08 Aligned_cols=177 Identities=14% Similarity=0.130 Sum_probs=100.9
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCcchhhhhhhhcc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPAEKKIKHFANLK 376 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 376 (538)
+-|=.|||.+ +.+.....++.|+++|++.+++|--+ +..+..++..+++...+.+. +++... +..+.+...
T Consensus 6 ~~D~DGTL~~~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~-~~~~~~~~~~~~~~~~~i~~~g~~~~~~~-~~~~~~~~~ 83 (230)
T d1wr8a_ 6 SIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNT-VQFAEAASILIGTSGPVVAEDGGAISYKK-KRIFLASMD 83 (230)
T ss_dssp EEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHHHTCCSCEEEGGGTEEEETT-EEEESCCCS
T ss_pred EEecCCCCcCCCCccCHHHHHHHHHHHhCCCeEEEEeCCc-HHHHHHHHHhcCCCcccccccceeeeccc-ccccccccc
Confidence 4578899975 77888999999999999999998433 46677888888988766542 111110 000000000
Q ss_pred cCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 377 KDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
..+.+ ...+...+......+ ....+...+.+.......+.++.
T Consensus 84 ------~~~~~-----------------------~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 126 (230)
T d1wr8a_ 84 ------EEWIL-----------------------WNEIRKRFPNARTSY--------TMPDRRAGLVIMRETINVETVRE 126 (230)
T ss_dssp ------HHHHH-----------------------HHHHHHHCTTCCBCT--------TGGGCSSCEEECTTTSCHHHHHH
T ss_pred ------HHHHH-----------------------HHHHHHhccccccee--------ecccceeeEEEecccccHHHHHH
Confidence 00000 000111110000000 01112222333333322334455
Q ss_pred HHhhcCCccccc----cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 457 LVDLFNWNQHFD----HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 457 ~L~~lgL~~yFd----~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++++++..-.+. ..++.+. +|+..+..+++++|++|+++++|||+.||+...+.+|. .|+|.+
T Consensus 127 ~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~-~vav~n 195 (230)
T d1wr8a_ 127 IINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGY-KVAVAQ 195 (230)
T ss_dssp HHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSE-EEECTT
T ss_pred HHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCe-EEEECC
Confidence 555554432211 1123332 67888999999999999999999999999999999997 455654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=9.4e-07 Score=81.22 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=36.8
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
.+|+++||+||||++. .-++.|.+.++|++|+++|+ ++++|+++.
T Consensus 2 ~~kl~~fDlDGTLl~~----------------------~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~ 46 (243)
T d2amya1 2 GPALCLFDVDGTLTAP----------------------RQKITKEMDDFLQKLRQKIK-IGVVGGSDF 46 (243)
T ss_dssp CSEEEEEESBTTTBCT----------------------TSCCCHHHHHHHHHHTTTSE-EEEECSSCH
T ss_pred CCEEEEEcCcCCeeCC----------------------CCcCCHHHHHHHHHHHcCCC-EEEEcCCCh
Confidence 3799999999999861 34566789999999999885 778998865
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=4.1e-06 Score=78.62 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=65.9
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCch--HHHHHHH-hhcCCccccccceeecC---CchHHHHHHHHHhCCCCCcE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLV-DLFNWNQHFDHKEIFPG---QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~~a~~~L-~~lgL~~yFd~~~i~~~---~k~~~~~kal~~lgi~pee~ 495 (538)
..+.||+.++|++++++|+++..+|+.... +.+...| +.+|+-.--.......+ .|...-..+ ++.++ .
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~I-k~y~I----~ 159 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWL-QDKNI----R 159 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHH-HHTTE----E
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHH-HHcCe----E
Confidence 446789999999999999999999975432 2344455 45887422211122222 233332333 56666 8
Q ss_pred EEEecccccHHhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++|||...|+.+|+++|+++|.|...
T Consensus 160 l~~GD~l~Df~aA~eagi~~iRi~r~ 185 (209)
T d2b82a1 160 IFYGDSDNDITAARDVGARGIRILRA 185 (209)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred EEecCCHHHHhHHHHcCCCceEeecc
Confidence 89999999999999999999999653
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.89 E-value=7.2e-06 Score=80.78 Aligned_cols=92 Identities=10% Similarity=0.068 Sum_probs=65.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC----CCcce---------eecCC------CCHHH
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ----YFSNK---------EIYPG------QKTTH 112 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~----~Fd~i---------e~~~~------~Kp~~ 112 (538)
..+.+.||+.++++.|+++|++++|+|++-. ..++.+++.+|+.. .+... ....+ .|-..
T Consensus 132 ~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~-~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~ 210 (291)
T d2bdua1 132 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIG-DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDG 210 (291)
T ss_dssp SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHH
T ss_pred cCCCcccCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcch
Confidence 3678999999999999999999999999988 99999999998752 12100 00111 12223
Q ss_pred HHHHHHH--cCCCCCcEEEEeCCcccHHHHhhcC
Q psy8912 113 FESLKKA--TGIEYKDMVFFDDEERNSHDVSPLG 144 (538)
Q Consensus 113 f~~ale~--lgi~P~e~L~IGDs~~DI~aAk~aG 144 (538)
....... ..-...+++++||+.+|+.||..+.
T Consensus 211 ~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 211 ALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp HHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred hhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 3232232 2235578999999999999998653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=3.1e-05 Score=70.39 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=44.3
Q ss_pred CCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh
Q psy8912 381 IKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 460 (538)
Q Consensus 381 ~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~ 460 (538)
|+.|.|+++|||.= + .+..+ .+-+...+.|+.|+++|++++++|..+.. .+...++.
T Consensus 1 ~~~~~li~~DlDGT-L------------------l~~~~---~i~~~~~~al~~l~~~Gi~~~i~TGR~~~-~~~~~~~~ 57 (232)
T d1xvia_ 1 IQQPLLVFSDLDGT-L------------------LDSHS---YDWQPAAPWLTRLREANVPVILCSSKTSA-EMLYLQKT 57 (232)
T ss_dssp CCCCEEEEEECTTT-T------------------SCSSC---CSCCTTHHHHHHHHHTTCCEEEECSSCHH-HHHHHHHH
T ss_pred CCCCEEEEEECCCC-c------------------cCCcC---cCCHHHHHHHHHHHHCCCEEEEEeCCChh-hchhHHHH
Confidence 78899999999920 0 00000 13356678999999999999999988754 67888888
Q ss_pred cCCc
Q psy8912 461 FNWN 464 (538)
Q Consensus 461 lgL~ 464 (538)
+++.
T Consensus 58 ~~~~ 61 (232)
T d1xvia_ 58 LGLQ 61 (232)
T ss_dssp TTCT
T ss_pred hccC
Confidence 8863
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=1.1e-05 Score=73.53 Aligned_cols=32 Identities=9% Similarity=0.051 Sum_probs=27.9
Q ss_pred CCCCCcEEEEeCCc----ccHHHHhhcCCeEEEECC
Q psy8912 121 GIEYKDMVFFDDEE----RNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 121 gi~P~e~L~IGDs~----~DI~aAk~aG~~tI~V~~ 152 (538)
+.+++++++|||+. +|+.+-+.+|..++.|.+
T Consensus 195 ~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 195 QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 46889999999985 999999999988888864
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.77 E-value=0.00011 Score=66.27 Aligned_cols=128 Identities=12% Similarity=-0.009 Sum_probs=87.9
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 97 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~ 97 (538)
.++||..|||.-. .--.+.|++.++++.|++.|+++.++|+-+. ..+..+.+.+|+..
T Consensus 4 ~~~~d~~~~~~~~---------------------~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~-~tA~~ia~~~Gi~~ 61 (168)
T d1wpga2 4 VICSDKTGTLTTN---------------------QLDPPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGIFG 61 (168)
T ss_dssp EEEECCTTTTBCC---------------------CECCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTSSC
T ss_pred EEEECCccEEEEE---------------------ecCCCchhHHHHHHHHHHCcCEEEEECCCCH-HHHHHHHHHcCCCC
Confidence 6789999999641 1135789999999999999999999999977 99999999999843
Q ss_pred CCcc-------------------------eeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 98 YFSN-------------------------KEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 98 ~Fd~-------------------------ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
.-.. ..++....|+.=..+.+.+.-....+.|+||+.+|..+-+.+.+. |.+..
T Consensus 62 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvG-Ia~~~ 140 (168)
T d1wpga2 62 ENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG-IAMGS 140 (168)
T ss_dssp TTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEE-EEETT
T ss_pred CccccccccccccccchhhHHHHhhhhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEE-EEecc
Confidence 2111 123334455432333333333346799999999999999999864 45554
Q ss_pred CCCchHhHHhhCCCCCCEEEeCC
Q psy8912 153 MMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 153 G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|. ... ...+|++..+.
T Consensus 141 gt--~~a-----~~aAdivl~~~ 156 (168)
T d1wpga2 141 GT--AVA-----KTASEMVLADD 156 (168)
T ss_dssp SC--HHH-----HHTCSEEETTC
T ss_pred cc--HHH-----HHhCCEEEccC
Confidence 33 211 12467777653
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.67 E-value=4.4e-05 Score=68.05 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=73.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc---------eeecCCchHHHHHHHHHhCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------EIFPGQKTTHFANLKKATGI 490 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~---------~i~~~~k~~~~~kal~~lgi 490 (538)
..+..+++...++..++ .++++++.|.... .........+++..++... ......+.......++++|+
T Consensus 66 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 143 (206)
T d1rkua_ 66 ATLKPLEGAVEFVDWLR-ERFQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 143 (206)
T ss_dssp TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred hhccccchHHHHHHHhh-cCceEEEeccCch-HHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcc
Confidence 35678899999888775 6799999998754 4777788888887655411 11122455556778888999
Q ss_pred CCCcEEEEecccccHHhHcccCCEEEE
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
++++|++|||+.||+...+.||.-+..
T Consensus 144 ~~~eviaiGDg~NDi~Ml~~Ag~gIAm 170 (206)
T d1rkua_ 144 LYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp TTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred cccceEEecCCccCHHHHHhCCccEEE
Confidence 999999999999999999999997654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=97.65 E-value=0.00013 Score=68.99 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=38.2
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|..-+..+++.+|++++++++|||+.||+...+.+|. .++|.++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~-svam~na 257 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA 257 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCe-EEEeCCC
Confidence 35555788889999999999999999999999999984 5577775
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.60 E-value=3.5e-05 Score=72.74 Aligned_cols=50 Identities=10% Similarity=0.224 Sum_probs=42.8
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|..-+..+++++|++++++++|||+.||+...+.+|. +++|.++
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na 230 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQA 230 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCC
Confidence 45444 68888999999999999999999999999999999988 5677764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.59 E-value=9.4e-05 Score=68.08 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=39.7
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|......+++++|+++++|++|||+.+|+...+.+|. .|+|.++
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~-~vav~na 195 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVR-KACPANA 195 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSE-EEECTTS
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCe-EEEECCC
Confidence 67888999999999999999999999999999999996 5566553
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.53 E-value=5.8e-05 Score=69.96 Aligned_cols=93 Identities=12% Similarity=0.150 Sum_probs=67.9
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCC--------Cch---HHHHHHHhhcCCcc-cccccee--ecCCchHHHHHHHHHhC
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRT--------TEM---LRAHQLVDLFNWNQ-HFDHKEI--FPGQKTTHFANLKKATG 489 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss--------~~~---~~a~~~L~~lgL~~-yFd~~~i--~~~~k~~~~~kal~~lg 489 (538)
++|+|.+.|+.|+++||.+.|+|+- +.+ .....+++.+++.. +|-+..- +..+.+.++..++++..
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n 130 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQAN 130 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSS
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhc
Confidence 5799999999999999999999962 111 13455677777542 1111111 11245777999999864
Q ss_pred ----CCCCcEEEEecc-----------------cccHHhHcccCCEEE
Q psy8912 490 ----IEYKDMVFFDDE-----------------ERNSHDVSPLGVTCI 516 (538)
Q Consensus 490 ----i~pee~l~~eDs-----------------~~~I~aAk~aGi~~i 516 (538)
++.++++||||+ ..|++.|+++|++..
T Consensus 131 ~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 131 EGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp SSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred ccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 899999999995 489999999999974
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.53 E-value=5e-06 Score=76.19 Aligned_cols=94 Identities=10% Similarity=0.050 Sum_probs=68.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~ 498 (538)
.+.+.||+.+||+++.+. +.++|-|++. +++|+.+++.+.-..+|...-.... .....+.|-++.+|-+.+.+|+|
T Consensus 53 ~v~~RP~l~eFL~~l~~~-yei~I~Ta~~-~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vviv 130 (181)
T d1ta0a_ 53 YVLKRPHVDEFLQRMGEL-FECVLFTASL-AKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLIL 130 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSC-HHHHHHHHHHHCSSCCEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEE
T ss_pred EEecCCCHHHHHHHHHhc-eEEEEEcCCc-HHHHHHHHHHhccCCceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEE
Confidence 477899999999999877 9999999987 4599999999988777652211111 11122445567789999999999
Q ss_pred ecccccHHhHcccCCEEE
Q psy8912 499 DDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 499 eDs~~~I~aAk~aGi~~i 516 (538)
||+......-...|+.+-
T Consensus 131 Dd~~~~~~~~~~N~I~I~ 148 (181)
T d1ta0a_ 131 DNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp CSCGGGGTTCGGGBCCCC
T ss_pred cCChhhhhcCccCeeEec
Confidence 999987655444555443
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.47 E-value=0.00013 Score=75.45 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=78.0
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---------CCCCCCcceeecCCCCHHH------------
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPGQKTTH------------ 112 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---------gL~~~Fd~ie~~~~~Kp~~------------ 112 (538)
+..-|.+..+|++||+.|.++.++||++- ..+...+..+ .|.++||.+ +....||..
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~m~y~~~~~~~~g~dWr~lFDvV-Iv~A~KP~FF~~~~~~~~v~~ 261 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFEFV-ITLANKPRFFYDNLRFLSVNP 261 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHHGGGSCTTCCGGGTEEEE-EESCCHHHHHHSCCCEEEECT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcH-HHHHHHhhhhcccCCCCCCChHHhceEE-EeCCCCCCccCCCCcceEEeC
Confidence 33457899999999999999999999988 8888877753 566899976 444455543
Q ss_pred ---------------------HHHHHHHcCCCCCcEEEEeCCcc-cHHHHh-hcCCeEEEECCC
Q psy8912 113 ---------------------FESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHSWLM 153 (538)
Q Consensus 113 ---------------------f~~ale~lgi~P~e~L~IGDs~~-DI~aAk-~aG~~tI~V~~G 153 (538)
.....+.+|....+++||||+.. ||..++ ..|++|++|..-
T Consensus 262 ~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 262 ENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp TTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred CCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 56677888998899999999975 877776 479999999753
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.0003 Score=63.79 Aligned_cols=92 Identities=9% Similarity=-0.036 Sum_probs=59.7
Q ss_pred cCCCccCCCHHHHHHHhhhCC-ceEEEEcCCCcH--H---HHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENK-CLVAAASRTSEI--L---HAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p--~---~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P 124 (538)
-..+.|+||+.++++.|++.| +.+.++|..+.. . .....|+.+.. ..+....++++.|. .+..
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~-~~~~~~~~~t~~K~----------~~~~ 138 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-PDFLEQIVLTRDKT----------VVSA 138 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC-GGGGGGEEECSCST----------TSCC
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcC-CCCccEEEEccccc----------eecC
Confidence 456889999999999999865 578888886531 1 11223444321 12211123444442 1222
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
-++|+|++.++.++.++|+.++++...+.
T Consensus 139 --d~lIDD~p~n~~~~~~~g~~~il~~~~~N 167 (195)
T d1q92a_ 139 --DLLIDDRPDITGAEPTPSWEHVLFTACHN 167 (195)
T ss_dssp --SEEEESCSCCCCSCSSCSSEEEEECCTTT
T ss_pred --eEEecCcHHHHHHHhcCCCeEEEECCCcc
Confidence 27899999999999999999999976554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.45 E-value=3.2e-05 Score=76.03 Aligned_cols=113 Identities=9% Similarity=0.037 Sum_probs=74.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc----cc------c--cc-------eeecCCchHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ----HF------D--HK-------EIFPGQKTTHF 481 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~----yF------d--~~-------~i~~~~k~~~~ 481 (538)
.+.|.||+.+++++|+++|++++|+|+.-.+ .++.+|+++|+.. .| + .. .+.+..|....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~-~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGD-VLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHH-HHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHH-HHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 4789999999999999999999999998754 9999999999852 12 1 00 11122333343
Q ss_pred HHHHH--HhCCCCCcEEEEecccccHHhHcccCC--EEEEECCCCCHHHHHHHHHHHHh
Q psy8912 482 ANLKK--ATGIEYKDMVFFDDEERNSHDVSPLGV--TCIHVKDGMSHSVLHKGLKQWAS 536 (538)
Q Consensus 482 ~kal~--~lgi~pee~l~~eDs~~~I~aAk~aGi--~~i~V~dg~t~~~~~~~l~~~~~ 536 (538)
.+... +..-...++|++||+.+|+..|+.+.. .++.+ |+-.+..++.+..|++
T Consensus 212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~i--gFL~~~~ee~l~~y~~ 268 (291)
T d2bdua1 212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI--GYLNDRVDELLEKYMD 268 (291)
T ss_dssp HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEE--EEECSCHHHHHHHHHH
T ss_pred hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeee--ehhHhhHHHHHHHHHh
Confidence 33333 234467899999999999999986432 22222 3222233455665654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.35 E-value=0.00025 Score=64.31 Aligned_cols=85 Identities=18% Similarity=0.165 Sum_probs=69.9
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
-++.|+..|+.+++.|+-..+ .+....+.+++...|. ...+|...+.+.++++|+++++|+||||..+|+..-+.
T Consensus 40 gi~~l~~~gi~~~iis~~~~~-~v~~~~~~l~~~~~~~----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~ 114 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSP-ILRRRIADLGIKLFFL----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 114 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCH-HHHHHHHHHTCCEEEE----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHhhhcEEEEEecCCchh-HHHHHHhhhccccccc----ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh
Confidence 378889999999999987654 7777888888876554 33467777889999999999999999999999999999
Q ss_pred cCCEEEEECCC
Q psy8912 511 LGVTCIHVKDG 521 (538)
Q Consensus 511 aGi~~i~V~dg 521 (538)
+|. .+++.++
T Consensus 115 ~g~-siap~nA 124 (177)
T d1k1ea_ 115 CGT-SFAVADA 124 (177)
T ss_dssp SSE-EEECTTS
T ss_pred CCe-EEEcCCc
Confidence 996 4555553
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00021 Score=67.05 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=41.3
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|..-+..+++++|++++++++|||+.||+...+.+|.-++ |.++
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~va-m~Na 234 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNA 234 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTC
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEE-eCCC
Confidence 34443 68888999999999999999999999999999998876554 6554
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.30 E-value=0.00015 Score=62.33 Aligned_cols=49 Identities=20% Similarity=0.099 Sum_probs=39.1
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS 81 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~ 81 (538)
|.++||+||||....-. ......|.+++.+.|..|++.|+++.+.|...
T Consensus 2 K~i~~DiDGTI~~~~~~----------------~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTS----------------DYRNVLPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCS----------------CGGGCCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCC----------------CcCccCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 67999999999541100 12246799999999999999999999999984
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.21 E-value=1.2e-05 Score=73.55 Aligned_cols=128 Identities=15% Similarity=0.055 Sum_probs=79.4
Q ss_pred ceEEEeCCCCCChhhHhhhh-chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 17 KMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.++|+|+|+||+.+...... +.+......-.......+...||+.++|+.+.+. +.++|.|.+.. .+++.+++.+.-
T Consensus 16 ~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~-~YA~~il~~ldp 93 (181)
T d1ta0a_ 16 ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYADPVADLLDK 93 (181)
T ss_dssp CEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHHHCS
T ss_pred eEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCCcH-HHHHHHHHHhcc
Confidence 68999999999542110000 0000000000000122356789999999999877 99999999988 999999999986
Q ss_pred CCCCcceeecCCC--CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 96 NQYFSNKEIYPGQ--KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 96 ~~~Fd~ie~~~~~--Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
...|...-....+ ....+.+-++.+|-+.+++++|+|++.-...-...|+.
T Consensus 94 ~~~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~ 146 (181)
T d1ta0a_ 94 WGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp SCCEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCC
T ss_pred CCceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeE
Confidence 6655543111111 11113344567788889999999998865444445554
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.13 E-value=0.0016 Score=56.42 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=69.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
+-.++|++.+.+++|++.|+++.++|.-+ ++.++.+-+.+||..+|. ... ++.-...+++++-. ..+.|+||
T Consensus 19 ~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~-~~~a~~ia~~lgI~~v~~--~~~----p~~k~~~v~~~q~~-~~v~~vGD 90 (135)
T d2b8ea1 19 PDTLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIA--EVL----PHQKSEEVKKLQAK-EVVAFVGD 90 (135)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEEC--SCC----HHHHHHHHHHHTTT-SCEEEEEC
T ss_pred CCCCCccHHHHHHHHHHcCCEEEEEcCcc-hhhhhHHHhhhhhhhhcc--ccc----hhHHHHHHHHHHcC-CEEEEEeC
Confidence 45689999999999999999999999765 558888889999987665 222 23323344445443 57889999
Q ss_pred ccccHHhHcccCCEEEEECCC
Q psy8912 501 EERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 501 s~~~I~aAk~aGi~~i~V~dg 521 (538)
..+|+.+-++|++- +++..+
T Consensus 91 g~nD~~aL~~Advg-ia~~~~ 110 (135)
T d2b8ea1 91 GINDAPALAQADLG-IAVGSG 110 (135)
T ss_dssp SSSSHHHHHHSSEE-EEECCC
T ss_pred CCCcHHHHHhCCee-eecCcc
Confidence 99999999999875 355544
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.99 E-value=0.00047 Score=58.94 Aligned_cols=59 Identities=15% Similarity=0.003 Sum_probs=44.2
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHH---HHHHHHcC
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA---KQILNLIN 94 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~---~~~L~~lg 94 (538)
.++||+||||.... .....+|+|++.++|+.|++.|+.+.+.|+.+. ... ...|++.|
T Consensus 2 ti~vDiDGTl~~~~------------------~~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~-~~~~~t~~wL~~~~ 62 (122)
T d2obba1 2 TIAVDFDGTIVEHR------------------YPRIGEEIPFAVETLKLLQQEKHRLILWSVREG-ELLDEAIEWCRARG 62 (122)
T ss_dssp EEEECCBTTTBCSC------------------TTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCH-HHHHHHHHHHHTTT
T ss_pred EEEEEcCCCcCCCC------------------CCccccccHHHHHHHHHHHHCCCeEEEEecCCC-cchHHHHHHHHHcC
Confidence 48999999995311 122457999999999999999999999999866 443 34455555
Q ss_pred C
Q psy8912 95 L 95 (538)
Q Consensus 95 L 95 (538)
+
T Consensus 63 i 63 (122)
T d2obba1 63 L 63 (122)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=96.97 E-value=0.0004 Score=65.00 Aligned_cols=201 Identities=15% Similarity=0.150 Sum_probs=103.9
Q ss_pred ccccccccc----ccccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcc---ccc---ccccC-cchh----
Q psy8912 304 VEDAKGTLL----NLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDF---FDY---KEIFP-AEKK---- 368 (538)
Q Consensus 304 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~-~~~~---- 368 (538)
+-|=+|||. ++-|...+.+++|.++||++++|| .-++..++.+++.+++... +.+ ..+|. ..++
T Consensus 8 ~~DlDGTL~~~~~~i~~~~~~al~~L~~~gi~v~i~T-GR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~ 86 (271)
T d1rkqa_ 8 AIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTT-GRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQ 86 (271)
T ss_dssp EECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC-SSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEE
T ss_pred EEeCCccccCCCCccCHHHHHHHHHHHHCCCEEEEEC-CCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEe
Confidence 456777775 355778999999999999999998 3355778888999988753 221 22221 1111
Q ss_pred ----hhhhhhcccCcCCCccceEEeecCCCCcCCC-CCCcccccccccchHhhhcCCCCcc-CCCHHHHHHHHHHCCceE
Q psy8912 369 ----IKHFANLKKDSKIKYKDMVFFDDEERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKY-YRDVPAILKYLKQNNCLV 442 (538)
Q Consensus 369 ----~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l-~pGv~e~L~~Lk~~Gikl 442 (538)
...++.+..-..-......+++-+....+.- .++.. ..+.+...... +....+ +. ....+..
T Consensus 87 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 154 (271)
T d1rkqa_ 87 TALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYT---------VHESFVATIPLVFCEAEK-MD--PNTQFLK 154 (271)
T ss_dssp CCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHH---------HHHHHHTTCCEEECCGGG-SC--TTCCBCE
T ss_pred ecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHH---------HHHHhhccCccccchhhh-cC--cccceEE
Confidence 1112222111111223334444331111110 01110 01111111110 111111 00 1122333
Q ss_pred EEEeCCCchHHHHHHHhhcCC--ccccc-------cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc
Q psy8912 443 AAASRTTEMLRAHQLVDLFNW--NQHFD-------HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 443 aIASss~~~~~a~~~L~~lgL--~~yFd-------~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a 511 (538)
.+... .++.....++.+.- .+.+. ..++.+. +|..-+..++++++++++++++|||+.||+...+.+
T Consensus 155 ~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~ 232 (271)
T d1rkqa_ 155 VMMID--EPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYA 232 (271)
T ss_dssp EEEEC--CHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEEec--CHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhC
Confidence 33332 23344455544321 01111 1234443 688889999999999999999999999999999999
Q ss_pred CCEEEEECC
Q psy8912 512 GVTCIHVKD 520 (538)
Q Consensus 512 Gi~~i~V~d 520 (538)
|. .++|.+
T Consensus 233 ~~-~~am~n 240 (271)
T d1rkqa_ 233 GV-GVAVDN 240 (271)
T ss_dssp SE-EEECTT
T ss_pred Cc-EEEeCC
Confidence 94 446655
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.84 E-value=0.0033 Score=58.82 Aligned_cols=198 Identities=15% Similarity=0.138 Sum_probs=103.5
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcc-ccc-----------ccccCcc-
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDF-FDY-----------KEIFPAE- 366 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~- 366 (538)
+-|=+|||.+ +-|...+.+++|+++| .+++||-. ++..+..++..++..++ +++ +++|...
T Consensus 6 ~~DlDGTL~~~~~~i~~~~~~al~~l~~~~-~~~i~TGR-~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i 83 (267)
T d1nf2a_ 6 VFDLDGTLLNDNLEISEKDRRNIEKLSRKC-YVVFASGR-MLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKI 83 (267)
T ss_dssp EEECCCCCSCTTSCCCHHHHHHHHHHTTTS-EEEEECSS-CHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCB
T ss_pred EEeCCccccCCcCccCHHHHHHHHHHHcCC-EEEEECCC-ChHHHHHHHHHhcccCCceeccCCeEEEecccccccccCC
Confidence 4566777754 5567778889998765 68888643 35567778888887765 322 2232220
Q ss_pred --hhhhhhhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCc-eEE
Q psy8912 367 --KKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNC-LVA 443 (538)
Q Consensus 367 --~~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gi-kla 443 (538)
..++.+-...+... ..+.++.-|..-. .-+... ........+......+...+.+.. .++ ++.
T Consensus 84 ~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~ 149 (267)
T d1nf2a_ 84 PPEVAKDIIEYIKPLN---VHWQAYIDDVLYS-EKDNEE-------IKSYARHSNVDYRVEPNLSELVSK---MGTTKLL 149 (267)
T ss_dssp CHHHHHHHHHHHGGGC---CCEEEECSSCEEE-SSCCHH-------HHHHHHHTTCCEEECTTHHHHHHH---HCBSEEE
T ss_pred CHHHHHHHHHHHHhcC---ceEEEeeCceEEe-cCCcHH-------HHHHHHhcCCCceecCcHHHHhhh---ccceEEE
Confidence 11111111112221 1233333231100 000000 011111222233345555555433 233 343
Q ss_pred EEeCCCchHHHHHH---Hh-hcC-Cccccc----cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccC
Q psy8912 444 AASRTTEMLRAHQL---VD-LFN-WNQHFD----HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLG 512 (538)
Q Consensus 444 IASss~~~~~a~~~---L~-~lg-L~~yFd----~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aG 512 (538)
+.. +. +..+.+ ++ .++ ....+. ..++.+. +|..-+..+++++|++++++++|||+.||+...+.+|
T Consensus 150 ~~~-~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 150 LID-TP--ERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAG 226 (267)
T ss_dssp EEC-CH--HHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCS
T ss_pred Eec-cH--HHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCC
Confidence 332 22 233333 22 222 111111 1234343 6888899999999999999999999999999999999
Q ss_pred CEEEEECCC
Q psy8912 513 VTCIHVKDG 521 (538)
Q Consensus 513 i~~i~V~dg 521 (538)
. .|+|.++
T Consensus 227 ~-sva~~na 234 (267)
T d1nf2a_ 227 L-RVAMENA 234 (267)
T ss_dssp E-EEECTTS
T ss_pred c-EEEeCCC
Confidence 6 4677665
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.67 E-value=0.0069 Score=54.73 Aligned_cols=43 Identities=7% Similarity=-0.140 Sum_probs=35.2
Q ss_pred hHHHHHHHHHhC-CCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 478 TTHFANLKKATG-IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 478 ~~~~~kal~~lg-i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.....++++++| +.+++|++|||+.||+.--+.+| ..++|.++
T Consensus 181 ~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~-~~va~~Na 224 (243)
T d1wzca1 181 GKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVD-KVFIVGSL 224 (243)
T ss_dssp HHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSS-EEEEESSC
T ss_pred HHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCC-cEEEeCCC
Confidence 333567778884 89999999999999999999998 66677765
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=96.17 E-value=0.0022 Score=59.71 Aligned_cols=45 Identities=20% Similarity=0.205 Sum_probs=39.7
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|...+..+++.++++++++++|||+.||+...+.+|. .++|.++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~-~va~~na 251 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY-SFAVANA 251 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE-EEECTTC
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCc-EEEeCCC
Confidence 67888999999999999999999999999999999995 4566664
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.00 E-value=0.0069 Score=54.01 Aligned_cols=97 Identities=7% Similarity=0.006 Sum_probs=68.5
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc-------------------------cceeecCCc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-------------------------HKEIFPGQK 477 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd-------------------------~~~i~~~~k 477 (538)
+++|+++++++.|++.|+++-++|.-+ +..+..+-+.+||...-. ...++..-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~-~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDN-KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCC-HHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 588999999999999999999999765 568899999999853211 012233333
Q ss_pred hHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 478 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 478 ~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|+.=..+.+.++-....+.++||..+|..+-+.|.+-. ++..|
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGI-a~~~g 141 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI-AMGSG 141 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEE-EETTS
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEE-Eeccc
Confidence 44323333444333467899999999999999988544 44444
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.52 E-value=0.0044 Score=55.32 Aligned_cols=50 Identities=20% Similarity=0.169 Sum_probs=35.4
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHH
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA 86 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~ 86 (538)
+|+||+||||.+... ......+.|.+.++|++|++. ..++++|+++. ..+
T Consensus 2 Li~~DlDGTL~~~~~-----------------~~~~~~i~~~~~~~l~~l~~~-~~v~i~TGR~~-~~l 51 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIM-----------------NPEESYADAGLLSLISDLKER-FDTYIVTGRSP-EEI 51 (229)
T ss_dssp EEEEECBTTTBCCCS-----------------CGGGCCCCHHHHHHHHHHHHH-SEEEEECSSCH-HHH
T ss_pred EEEEEecCCCCCCCC-----------------ChhhCCCCHHHHHHHHHHhhC-CCEEEEcCCCH-HHh
Confidence 689999999964100 012334667789999999875 66999999876 443
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=95.45 E-value=0.019 Score=58.93 Aligned_cols=100 Identities=12% Similarity=0.162 Sum_probs=76.0
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh-c--------CCccccccceeecCCchHH--------------
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-F--------NWNQHFDHKEIFPGQKTTH-------------- 480 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~-l--------gL~~yFd~~~i~~~~k~~~-------------- 480 (538)
.-|.+..+|+.||+.|-++-++|+|+- +.+..+++. + .+.+|||. .|....||.-
T Consensus 186 k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~m~y~~~~~~~~g~dWr~lFDv-VIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 186 REKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFEF-VITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHHGGGSCTTCCGGGTEEE-EEESCCHHHHHHSCCCEEEECTTT
T ss_pred CChhHHHHHHHHHHcCCeEEEEecCcH-HHHHHHhhhhcccCCCCCCChHHhceE-EEeCCCCCCccCCCCcceEEeCCC
Confidence 357899999999999999999999975 477766655 3 67789994 3334444443
Q ss_pred -------------------HHHHHHHhCCCCCcEEEEeccccc-HHhHcc-cCCEEEEECCCCCHH
Q psy8912 481 -------------------FANLKKATGIEYKDMVFFDDEERN-SHDVSP-LGVTCIHVKDGMSHS 525 (538)
Q Consensus 481 -------------------~~kal~~lgi~pee~l~~eDs~~~-I~aAk~-aGi~~i~V~dg~t~~ 525 (538)
.....+-+|..-.+++||||..++ |..+++ .|-.+++|-..+..+
T Consensus 264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ELe~E 329 (458)
T d2bdea1 264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELGEE 329 (458)
T ss_dssp CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTHHHH
T ss_pred CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHHHHH
Confidence 355666789999999999999775 666654 999999998876433
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.40 E-value=0.079 Score=47.01 Aligned_cols=92 Identities=10% Similarity=0.020 Sum_probs=58.5
Q ss_pred CCCccCCCHHHHHHHHHHCCc-eEEEEeCCCch--HHH---HHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNC-LVAAASRTTEM--LRA---HQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~Gi-klaIASss~~~--~~a---~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pe 493 (538)
..++++||+.++|+.|++.|. .+-++|+.... ..+ ..-|++... ..+....+.+++|. .+..
T Consensus 71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~-~~~~~~~~~t~~K~----------~~~~- 138 (195)
T d1q92a_ 71 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-PDFLEQIVLTRDKT----------VVSA- 138 (195)
T ss_dssp TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC-GGGGGGEEECSCST----------TSCC-
T ss_pred hhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcC-CCCccEEEEccccc----------eecC-
Confidence 468899999999999998654 56677765321 011 112443211 12211244555552 1222
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
-++|||++.++++..++|..+|......|.
T Consensus 139 -d~lIDD~p~n~~~~~~~g~~~il~~~~~N~ 168 (195)
T d1q92a_ 139 -DLLIDDRPDITGAEPTPSWEHVLFTACHNQ 168 (195)
T ss_dssp -SEEEESCSCCCCSCSSCSSEEEEECCTTTT
T ss_pred -eEEecCcHHHHHHHhcCCCeEEEECCCccc
Confidence 289999999999999999999988655443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.40 E-value=0.25 Score=46.33 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=67.8
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-------Ccce---------------------
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-------FSNK--------------------- 102 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-------Fd~i--------------------- 102 (538)
.....+.||+.++|+.|.+. .+.+|+|.+-+ .+.+++....|+... +|.+
T Consensus 77 E~~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~-qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~ 154 (308)
T d1y8aa1 77 ELSAKFVPDAEKAMATLQER-WTPVVISTSYT-QYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 154 (308)
T ss_dssp HHHCCBCTTHHHHHHHHHTT-CEEEEEEEEEH-HHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred hhceeecCCHHHHHHHHHhh-CCcEEEeccHH-HHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCcc
Confidence 34678899999999999988 88889888877 899999999987511 1111
Q ss_pred ------------------------eecC-CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhc---CCeEEEEC
Q psy8912 103 ------------------------EIYP-GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHSW 151 (538)
Q Consensus 103 ------------------------e~~~-~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~a---G~~tI~V~ 151 (538)
...+ +.|..+.+..++..++.+. ++||||..|+++-+.+ |--+|.++
T Consensus 155 ~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~r~~gGlaIsFN 229 (308)
T d1y8aa1 155 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAARGLGGVAIAFN 229 (308)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHHHhcCCCeeEEec
Confidence 0001 1122345666677788775 9999999997766554 55566665
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=90.64 E-value=0.16 Score=45.75 Aligned_cols=44 Identities=11% Similarity=0.094 Sum_probs=38.6
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+|......+++++|++++++++|||+.+|+..-+.+|. .++|.+
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~n 205 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRN 205 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTT
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeCC
Confidence 67888999999999999999999999999999999984 455654
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=84.27 E-value=0.85 Score=38.01 Aligned_cols=28 Identities=14% Similarity=0.042 Sum_probs=25.5
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
..+.+++.+.|.+|++.|+++-+.|+..
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4688999999999999999999999764
|