Psyllid ID: psy8979


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
MIRLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQKMDMETQQFLGERQERIRLLHERQERELESFDQESNRMGFSALAIAEASKESYPDMDGSLSGSMLSLNHSNSCNSFPEGSL
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccccccc
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHcccccccccccEEEEcccccccccccccc
mirldesqevECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQKMDMETQQFLGERQERIRLLHERQERElesfdqesnrmGFSALAIAEAskesypdmdgslsgsmlslnhsnscnsfpegsl
mirldesqevecHHLKERLHYELEILMAYQSKNKMQAEAQRnrerkeledrvSVRRAlleqkmdmetqqflgERQERIRLLHERQERelesfdqesnrmGFSALAIAEASKESYPDMDGSLSGSMLSlnhsnscnsfpegsl
MIRLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQKMDMETQQFLGerqerirllherqereleSFDQESNRMGFSALAIAEASKESYPdmdgslsgsmlslnhsnsCNSFPEGSL
***********CHHLKERLHYELEILMAY*****************************************************************************************************************
**RLDES***************LEILMA******************************************************************************************************************
MIRLDESQEVECHHLKERLHYELEILMAYQSKN******************VSVRRALLEQKMDMETQQFLGERQERIRLLHERQERELESFDQESNRMGFSALAIAEASKESYPDMDGSLSGSMLSLNHSN**********
*IRLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQKMDMETQQFLGERQERIRLLHERQERELESFDQESNRMGFSALAIAEASKESYPDM***LSG*******************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIRLDESQEVECHHLKERLHYELEILMAxxxxxxxxxxxxxxxxxxxxxDRVSVRRALLEQKMDMETQQFLGERxxxxxxxxxxxxxxxxxxxxxSNRMGFSALAIAEASKESYPDMDGSLSGSMLSLNHSNSCNSFPEGSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query142 2.2.26 [Sep-21-2011]
Q7L7X31001 Serine/threonine-protein no N/A 0.830 0.117 0.581 5e-28
O886641001 Serine/threonine-protein yes N/A 0.936 0.132 0.532 8e-28
Q7ZYJ01001 Serine/threonine-protein N/A N/A 0.830 0.117 0.581 1e-27
Q5F2E81001 Serine/threonine-protein yes N/A 0.802 0.113 0.593 2e-27
Q6NU211001 Serine/threonine-protein N/A N/A 0.830 0.117 0.565 4e-26
Q6DD27896 Serine/threonine-protein N/A N/A 0.795 0.126 0.575 9e-26
Q9H2K8898 Serine/threonine-protein no N/A 0.795 0.125 0.566 1e-24
Q5R4F3898 Serine/threonine-protein no N/A 0.795 0.125 0.566 1e-24
Q8BYC6898 Serine/threonine-protein no N/A 0.795 0.125 0.566 1e-24
Q53UA7898 Serine/threonine-protein no N/A 0.795 0.125 0.566 1e-24
>sp|Q7L7X3|TAOK1_HUMAN Serine/threonine-protein kinase TAO1 OS=Homo sapiens GN=TAOK1 PE=1 SV=1 Back     alignment and function desciption
 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 4/122 (3%)

Query: 2   IRLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQ 61
           +RLDE+QE EC  LK +L  ELE+L AYQSK KMQAEAQ +RE +ELE RVS+RRALLEQ
Sbjct: 788 LRLDEAQEAECQVLKMQLQQELELLNAYQSKIKMQAEAQHDRELRELEQRVSLRRALLEQ 847

Query: 62  KMDMETQQFLGERQERIRLLHERQERELESFDQESNRMGFSALAIAEASKE----SYPDM 117
           K++ E      ER ERIR L ERQ RE+E+FD ES R+GFS + ++  S E    SYP  
Sbjct: 848 KIEEEMLALQNERTERIRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPGA 907

Query: 118 DG 119
            G
Sbjct: 908 SG 909




Serine/threonine-protein kinase involved in various processes such as p38/MAPK14 stress-activated MAPK cascade, DNA damage response and regulation of cytoskeleton stability. Phosphorylates MAP2K3, MAP2K6 and MARK2. Acts as an activator of the p38/MAPK14 stress-activated MAPK cascade by mediating phosphorylation and subsequent activation of the upstream MAP2K3 and MAP2K6 kinases. Involved in G-protein coupled receptor signaling to p38/MAPK14. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of MAP2K3 and MAP2K6. Acts as a regulator of cytoskeleton stability by phosphorylating 'Thr-208' of MARK2, leading to activate MARK2 kinase activity and subsequent phosphorylation and detachment of MAPT/TAU from microtubules. Also acts as a regulator of apoptosis: regulates apoptotic morphological changes, including cell contraction, membrane blebbing and apoptotic bodies formation via activation of the MAPK8/JNK cascade.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|O88664|TAOK1_RAT Serine/threonine-protein kinase TAO1 OS=Rattus norvegicus GN=Taok1 PE=1 SV=1 Back     alignment and function description
>sp|Q7ZYJ0|TAO1B_XENLA Serine/threonine-protein kinase TAO1-B OS=Xenopus laevis GN=taok1-b PE=2 SV=1 Back     alignment and function description
>sp|Q5F2E8|TAOK1_MOUSE Serine/threonine-protein kinase TAO1 OS=Mus musculus GN=Taok1 PE=1 SV=1 Back     alignment and function description
>sp|Q6NU21|TAO1A_XENLA Serine/threonine-protein kinase TAO1-A OS=Xenopus laevis GN=taok1-a PE=2 SV=1 Back     alignment and function description
>sp|Q6DD27|TAOK3_XENLA Serine/threonine-protein kinase TAO3 OS=Xenopus laevis GN=taok3 PE=2 SV=1 Back     alignment and function description
>sp|Q9H2K8|TAOK3_HUMAN Serine/threonine-protein kinase TAO3 OS=Homo sapiens GN=TAOK3 PE=1 SV=2 Back     alignment and function description
>sp|Q5R4F3|TAOK3_PONAB Serine/threonine-protein kinase TAO3 OS=Pongo abelii GN=TAOK3 PE=2 SV=1 Back     alignment and function description
>sp|Q8BYC6|TAOK3_MOUSE Serine/threonine-protein kinase TAO3 OS=Mus musculus GN=Taok3 PE=1 SV=2 Back     alignment and function description
>sp|Q53UA7|TAOK3_RAT Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus GN=Taok3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query142
307207950 896 Serine/threonine-protein kinase TAO1 [Ha 0.985 0.156 0.858 6e-60
322790303 902 hypothetical protein SINV_80069 [Solenop 0.985 0.155 0.858 8e-60
307174672 897 Serine/threonine-protein kinase TAO1 [Ca 0.985 0.156 0.858 8e-60
332023435 897 Serine/threonine-protein kinase TAO1 [Ac 0.985 0.156 0.858 9e-60
380016628 897 PREDICTED: serine/threonine-protein kina 0.985 0.156 0.851 2e-59
383852655 897 PREDICTED: serine/threonine-protein kina 0.985 0.156 0.843 3e-58
170056388 977 serine/threonine-protein kinase TAO1 [Cu 0.992 0.144 0.787 1e-55
242010515 903 predicted protein [Pediculus humanus cor 0.985 0.155 0.780 1e-54
347969451 601 AGAP003201-PA [Anopheles gambiae str. PE 0.992 0.234 0.751 6e-54
270008982235 hypothetical protein TcasGA2_TC015606 [T 0.985 0.595 0.758 4e-53
>gi|307207950|gb|EFN85509.1| Serine/threonine-protein kinase TAO1 [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  234 bits (598), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 121/141 (85%), Positives = 130/141 (92%), Gaps = 1/141 (0%)

Query: 2   IRLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQ 61
           IRLDESQEVECH+LKERL+YELEILMAYQSKNKMQAEAQRNRER+ELEDRVSVRRALLEQ
Sbjct: 757 IRLDESQEVECHNLKERLNYELEILMAYQSKNKMQAEAQRNRERRELEDRVSVRRALLEQ 816

Query: 62  KMDMETQQFLGERQERIRLLHERQERELESFDQESNRMGFSALAIAEASKESYPDMDGSL 121
           KM++ETQ+FL ER ERIRLLHERQEREL+ FD+ES R+GFSALAIAEASKESYPD D SL
Sbjct: 817 KMELETQEFLRERSERIRLLHERQERELQQFDEESARIGFSALAIAEASKESYPD-DESL 875

Query: 122 SGSMLSLNHSNSCNSFPEGSL 142
           SGSMLSL HSNS  SFP  SL
Sbjct: 876 SGSMLSLAHSNSSTSFPPNSL 896




Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790303|gb|EFZ15302.1| hypothetical protein SINV_80069 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307174672|gb|EFN65055.1| Serine/threonine-protein kinase TAO1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332023435|gb|EGI63678.1| Serine/threonine-protein kinase TAO1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380016628|ref|XP_003692280.1| PREDICTED: serine/threonine-protein kinase TAO1-like [Apis florea] Back     alignment and taxonomy information
>gi|383852655|ref|XP_003701842.1| PREDICTED: serine/threonine-protein kinase TAO1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|170056388|ref|XP_001864007.1| serine/threonine-protein kinase TAO1 [Culex quinquefasciatus] gi|167876104|gb|EDS39487.1| serine/threonine-protein kinase TAO1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|242010515|ref|XP_002426013.1| predicted protein [Pediculus humanus corporis] gi|212510004|gb|EEB13275.1| predicted protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|347969451|ref|XP_312902.5| AGAP003201-PA [Anopheles gambiae str. PEST] gi|333468529|gb|EAA44791.5| AGAP003201-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|270008982|gb|EFA05430.1| hypothetical protein TcasGA2_TC015606 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query142
FB|FBgn00310301039 Tao "Tao" [Drosophila melanoga 0.985 0.134 0.457 6.1e-25
UNIPROTKB|E1BJ191001 TAOK1 "Uncharacterized protein 0.795 0.112 0.477 1.3e-19
UNIPROTKB|E2QRV21001 TAOK1 "Uncharacterized protein 0.795 0.112 0.477 1.3e-19
UNIPROTKB|Q7L7X31001 TAOK1 "Serine/threonine-protei 0.795 0.112 0.477 1.3e-19
MGI|MGI:19144901001 Taok1 "TAO kinase 1" [Mus musc 0.795 0.112 0.477 1.3e-19
RGD|7084551001 Taok1 "TAO kinase 1" [Rattus n 0.795 0.112 0.477 1.3e-19
UNIPROTKB|E1BYH21001 TAOK1 "Uncharacterized protein 0.795 0.112 0.469 2.6e-19
UNIPROTKB|Q7ZYJ01001 taok1-b "Serine/threonine-prot 0.795 0.112 0.477 2.6e-19
UNIPROTKB|Q6NU211001 taok1-a "Serine/threonine-prot 0.795 0.112 0.460 5e-18
UNIPROTKB|Q6DD27896 taok3 "Serine/threonine-protei 0.795 0.126 0.460 9e-18
FB|FBgn0031030 Tao "Tao" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 296 (109.3 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 64/140 (45%), Positives = 79/140 (56%)

Query:     3 RLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQK 62
             +LDESQ +EC    E+L YELE+L AYQ+KNK QA+ QR+RER+ELE+RVSVRR LLE K
Sbjct:   900 KLDESQVIECQRTHEQLEYELEMLTAYQNKNKKQAQEQRDRERRELENRVSVRRGLLENK 959

Query:    63 MDMETQQFLGXXXXXXXXXXXXXXXXXXSFDQESNRMGFSALAIAEASKESYPXXXXXXX 122
             MD E QQF                    +FD ES  +GFS L++ E S+E+Y        
Sbjct:   960 MDAELQQFNQERAERLRMKHEKHTKELEAFDNESIALGFSTLSLIEVSREAYADEEGSLS 1019

Query:   123 XXXXXXXXXXXCNSFPEGSL 142
                          SFP GSL
Sbjct:  1020 GSMISLAHSNSSTSFPAGSL 1039




GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS
GO:0006468 "protein phosphorylation" evidence=IEA;NAS
GO:0005524 "ATP binding" evidence=IEA
GO:0006915 "apoptotic process" evidence=IMP
GO:0004674 "protein serine/threonine kinase activity" evidence=IMP
GO:0005886 "plasma membrane" evidence=IDA
GO:0045471 "response to ethanol" evidence=IMP
GO:0048036 "central complex development" evidence=IMP
GO:0042220 "response to cocaine" evidence=IMP
GO:0035094 "response to nicotine" evidence=IMP
GO:0016319 "mushroom body development" evidence=IMP
GO:0046621 "negative regulation of organ growth" evidence=IMP
GO:0035329 "hippo signaling cascade" evidence=IGI
GO:0035332 "positive regulation of hippo signaling cascade" evidence=IGI
GO:0030707 "ovarian follicle cell development" evidence=IMP
GO:0045807 "positive regulation of endocytosis" evidence=IMP
GO:0045178 "basal part of cell" evidence=IDA
UNIPROTKB|E1BJ19 TAOK1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QRV2 TAOK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q7L7X3 TAOK1 "Serine/threonine-protein kinase TAO1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1914490 Taok1 "TAO kinase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708455 Taok1 "TAO kinase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYH2 TAOK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q7ZYJ0 taok1-b "Serine/threonine-protein kinase TAO1-B" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NU21 taok1-a "Serine/threonine-protein kinase TAO1-A" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DD27 taok3 "Serine/threonine-protein kinase TAO3" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O88664TAOK1_RAT2, ., 7, ., 1, 1, ., 10.53280.93660.1328yesN/A
Q5F2E8TAOK1_MOUSE2, ., 7, ., 1, 1, ., 10.59320.80280.1138yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 142
KOG0577|consensus948 100.0
PF03763111 Remorin_C: Remorin, C-terminal region ; InterPro: 94.47
PF11932251 DUF3450: Protein of unknown function (DUF3450); In 92.32
cd07666243 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of S 87.39
PF09731 582 Mitofilin: Mitochondrial inner membrane protein; I 86.35
>KOG0577|consensus Back     alignment and domain information
Probab=100.00  E-value=2.3e-40  Score=305.29  Aligned_cols=136  Identities=55%  Similarity=0.793  Sum_probs=128.1

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHH
Q psy8979           2 IRLDESQEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQKMDMETQQFLGERQERIRLL   81 (142)
Q Consensus         2 ~rLde~Qe~E~~~L~~qLqqElElL~aYQsK~k~q~eaQheRE~~~LeeRVs~RRalLEqkieeE~~~lq~eR~erir~L   81 (142)
                      +||||||++||++|+++|+||||+|+|||+|+||++++||+||+++||+||++|||+|||||++|+.+|+++|++||+.|
T Consensus       813 lklde~qe~E~q~l~~ql~qEle~l~ayq~k~k~~~e~q~~re~~ele~rvslrra~lEqkieeE~~~~~~~Rserir~l  892 (948)
T KOG0577|consen  813 LKLDEAQEAECQVLREQLEQELELLNAYQSKIKMQAEEQHERELRELEQRVSLRRALLEQKIEEELAQLQTERSERIRSL  892 (948)
T ss_pred             eechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccchHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhccchhHHhhhccCCCCCCCCCCCcccccccccCCCCCCCCCCCC
Q psy8979          82 HERQERELESFDQESNRMGFSALAIAEASKESYPDMDGSLSGSMLSLNHSNSCNSFPEGSL  142 (142)
Q Consensus        82 ~eRq~rEle~FD~es~rlGfs~l~~~~~s~e~~~~~~~s~sgs~~s~~~~~~~~~~~~~~~  142 (142)
                      ++||++||++||++|+++||++++++++|+++|.+..+|+.+++.|+.+++     |+|++
T Consensus       893 ~er~~~e~e~fd~es~r~Gfss~~~~~i~~ea~~~~~~s~~~~~~s~~~~~-----p~g~~  948 (948)
T KOG0577|consen  893 LERHAREIEAFDNESLRLGFSSLSLGGIPPEAYASSEGSIAMAMPSLHWSH-----PAGSP  948 (948)
T ss_pred             hhhhHHHHhhhhhHHHHhcccchhhcCCChhhhccCCCCccccCCCccccC-----CCCCC
Confidence            999999999999999999999999999999999887677777776655554     77763



>PF03763 Remorin_C: Remorin, C-terminal region ; InterPro: IPR005516 Remorin binds both simple and complex galaturonides Back     alignment and domain information
>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>cd07666 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 7 Back     alignment and domain information
>PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query142
1f5n_A592 Interferon-induced guanylate-binding protein 1; GB 83.62
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Back     alignment and structure
Probab=83.62  E-value=21  Score=32.07  Aligned_cols=81  Identities=23%  Similarity=0.310  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHH
Q psy8979           8 QEVECHHLKERLHYELEILMAYQSKNKMQAEAQRNRERKELEDRVSVRRALLEQKMDMETQQFLGERQERIRLLHERQER   87 (142)
Q Consensus         8 Qe~E~~~L~~qLqqElElL~aYQsK~k~q~eaQheRE~~~LeeRVs~RRalLEqkieeE~~~lq~eR~erir~L~eRq~r   87 (142)
                      +-++.++=++..++|.++|..=|.+....+++|    .+..+++|    +-|.+||++|...+..+-..-+..-+.-|+.
T Consensus       488 ~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~----~~~~~e~~----~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~  559 (592)
T 1f5n_A          488 EIEVERVKAESAQASAKMLHEMQRKNEQMMEQK----ERSYQEHL----KQLTEKMENDRVQLLKEQERTLALKLQEQEQ  559 (592)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345566777888999999999999988888888    34555555    3577788888887776655555444444433


Q ss_pred             HHH-Hhhhhh
Q psy8979          88 ELE-SFDQES   96 (142)
Q Consensus        88 Ele-~FD~es   96 (142)
                      =+. -|-.++
T Consensus       560 ~~~~g~~~~~  569 (592)
T 1f5n_A          560 LLKEGFQKES  569 (592)
T ss_dssp             HHHHTCHHHH
T ss_pred             HHHHHHHHHH
Confidence            333 344444




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00