Psyllid ID: psy9005

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MTEKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSWKRETRV
Secondary Structure (PSIPRED)
ccccccEEEEcccccEEEEccccccccEEEEEEccccccccEEccccccccccccEEEEEccccccccccccHHHHHHHHHHcEEEEEEccccEEEccc
Secondary Structure Prediction (SSPRO)
ccccccEHccccHHHEEEEccccccccccEEEEcccccccEEEcccccccccccEEEEEEEcccccccccccHHHHHEEccEEEEEEEEcccccccccc
Coil and Loop (DISEMBL)
MTEKIYSILrlspwatyvteppvvghayeqriwnpkpqdkhkwtsskpkkpdnlkiyESHVgictqeqkcasyEDFVRVHEERNLAATVTSswkretrv
Flexible Loop (DISEMBL)
MTEKIYsilrlspwatyvTEPPVVGHAYEQRIwnpkpqdkhkwtsskpkkpdnlKIYESHVGICTQEQKCASYEDFVRVHEErnlaatvtsswkretrv
Low Complexity Region (SEG)
MTEKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSWKRETRV
Disordered region (IsUnstruct)
****IYSILRLSPWATYVTEPPVVGHAYEQRIWN*******************LKIYESHVGICTQEQKCASYEDFVRVHEERNLAA************
Disordered Region (DISOPRED)
***KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK*PDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSWK*****
Disordered Region (DISEMBL)
MTEKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPK************KKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLA*************
Disordered Region (DISPRO)
***KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSS*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTEKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSWKRETRV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
Q96VA4	689	1,4-alpha-glucan-branchin	yes	N/A	0.717	0.103	0.405	3e-11
Q6BXN1	711	1,4-alpha-glucan-branchin	yes	N/A	0.707	0.098	0.434	5e-11
D2WL32	899	1,4-alpha-glucan-branchin	yes	N/A	0.686	0.075	0.434	1e-10
Q6CCT1	691	1,4-alpha-glucan-branchin	yes	N/A	0.696	0.099	0.376	2e-10
Q8NKE1	683	1,4-alpha-glucan-branchin	N/A	N/A	0.676	0.098	0.463	2e-10
Q9Y8H3	684	1,4-alpha-glucan-branchin	yes	N/A	0.717	0.103	0.364	5e-10
Q9D6Y9	702	1,4-alpha-glucan-branchin	yes	N/A	0.727	0.102	0.487	2e-09
Q6EAS5	699	1,4-alpha-glucan-branchin	yes	N/A	0.656	0.092	0.457	3e-09
Q6T308	699	1,4-alpha-glucan-branchin	N/A	N/A	0.656	0.092	0.471	6e-09
Q04446	702	1,4-alpha-glucan-branchin	yes	N/A	0.727	0.102	0.461	1e-08

>sp|Q96VA4|GLGB_ASPOR 1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gbeA PE=2 SV=1

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 3   EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG 62
           E+IY   R+  W   V +   V   YE   WNP  + ++K+  S+PK+P++L+IYE+HVG
Sbjct: 137 ERIY---RIPAWIKRVVQDLSVSPTYEAVFWNPPTEKQYKFQYSRPKRPESLRIYEAHVG 193

Query: 63  ICTQEQKCASYEDF 76
           I + E K A+Y++F
Sbjct: 194 ISSPETKVATYKEF 207

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 8

>sp|Q6BXN1|GLGB_DEBHA 1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=GLC3 PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 6/76 (7%)

Query: 3   EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK--KPDNLKIYESH 60
           E+IY   RL PW    T P    + YE R WNP+P + +K+   +P+    D +KIYE+H
Sbjct: 144 ERIY---RLCPWLKRAT-PSTENNLYEGRFWNPQPTETYKFKHERPRLESKDGIKIYEAH 199

Query: 61  VGICTQEQKCASYEDF 76
           VGI T E K  SY++F
Sbjct: 200 VGISTPEPKVGSYKNF 215

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           R+  WATYV +P   G       W P P+  +KW  SKPK P++L+IYE HVGI   E K
Sbjct: 355 RVPAWATYV-QPEDEGKQAYAIHWEPSPEAAYKWKYSKPKVPESLRIYECHVGISGSEPK 413

Query: 70  CASYEDFVR 78
            +++E+F +
Sbjct: 414 VSTFEEFTK 422

Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Essential during embryogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q6CCT1|GLGB_YARLI 1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GLC3 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RL  W+TYV +       YE   WNP   +K++W +  P  P N +IYE+HVGI + E +
Sbjct: 129 RLPAWSTYVVQDLSKSPIYEAVFWNPPESEKYQWKNKSPPTPANAQIYEAHVGISSSEPR 188

Query: 70  CASYEDFVR 78
             +Y++F +
Sbjct: 189 VGTYKEFTK 197

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 8   ILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQE 67
           I RL  W   VT+   V  AY+   WNP PQ K++W ++ PKKP +L+IYE+HVGI T E
Sbjct: 138 IDRLPAWIKRVTQDLNVSLAYDAIFWNP-PQ-KYQWKNNSPKKPTSLRIYEAHVGISTNE 195

Query: 68  QKCASYEDF 76
            +  +Y +F
Sbjct: 196 GRVGTYNEF 204

Glomus intraradices (taxid: 4876)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q9Y8H3|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=be1 PE=2 SV=3

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 3   EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG 62
           E+IY   R+  W   V +   V   YE   WNP   +++ +  ++PKKP++L+IYE+HVG
Sbjct: 132 ERIY---RIPAWIKRVVQDLNVSPIYESVFWNPPKAERYNFQHARPKKPESLRIYEAHVG 188

Query: 63  ICTQEQKCASYEDF 76
           I + + + A+Y++F
Sbjct: 189 ISSPDTRVATYKEF 202

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q9D6Y9|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 6/78 (7%)

Query: 1   MTEKIYSIL-RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYE 58
           +T K   IL R+SPWA YV  E   V   Y+   W   P+D +K+  S+PKKP +L+IYE
Sbjct: 146 ITSKSGEILYRISPWAKYVVRENNNVN--YDWIHW--APEDPYKFKHSRPKKPRSLRIYE 201

Query: 59  SHVGICTQEQKCASYEDF 76
           SHVGI + E K ASY+ F
Sbjct: 202 SHVGISSHEGKIASYKHF 219

Required for sufficient glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule and, consequently, in reducing the osmotic pressure within cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q6EAS5|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 8   ILRLSPWATYVTEPPVVGHA-YEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
           + R+SPWA YV      G+  Y+   W+P  +  +K+  S+PKKP +L+IYESHVGI + 
Sbjct: 151 LYRISPWAKYVVRES--GNVNYDWIHWDP--EQPYKFKHSRPKKPRSLRIYESHVGISSH 206

Query: 67  EQKCASYEDF 76
           E K ASY+ F
Sbjct: 207 EGKIASYKHF 216

Required for sufficient glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule and, consequently, in reducing the osmotic pressure within cells.

Equus caballus (taxid: 9796)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q6T308|GLGB_FELCA 1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 8   ILRLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
           + R+SPWA YVT E   V   Y+   W+P  +  +K+  S+PKKP  ++IYESHVGI + 
Sbjct: 151 LYRISPWAKYVTREGENVN--YDWTHWDP--EHPYKFKHSRPKKPRGVRIYESHVGISSY 206

Query: 67  EQKCASYEDF 76
           E K ASY+ F
Sbjct: 207 EGKIASYKHF 216

Required for sufficient glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule and, consequently, in reducing the osmotic pressure within cells.

Felis catus (taxid: 9685)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)

Query: 1   MTEKIYSIL-RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYE 58
           +T K   IL R+SPWA YV  E   V   Y+   W+P  +  +++  S+PKKP +L+IYE
Sbjct: 146 ITSKSGEILYRISPWAKYVVREGDNVN--YDWIHWDP--EHSYEFKHSRPKKPRSLRIYE 201

Query: 59  SHVGICTQEQKCASYEDF 76
           SHVGI + E K ASY+ F
Sbjct: 202 SHVGISSHEGKVASYKHF 219

Required for sufficient glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule and, consequently, in reducing the osmotic pressure within cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
380026836	694	PREDICTED: LOW QUALITY PROTEIN: 1,4-alph	0.696	0.099	0.536	5e-14
321455046	696	hypothetical protein DAPPUDRAFT_302911 [	0.656	0.093	0.544	1e-13
340720425	669	PREDICTED: 1,4-alpha-glucan-branching en	0.686	0.101	0.544	2e-13
91076104	692	PREDICTED: similar to GA17312-PA [Tribol	0.676	0.096	0.529	4e-13
383863554	692	PREDICTED: 1,4-alpha-glucan-branching en	0.696	0.099	0.492	4e-13
350410058	692	PREDICTED: 1,4-alpha-glucan-branching en	0.676	0.096	0.537	4e-13
408395841	707	hypothetical protein FPSE_04834 [Fusariu	0.696	0.097	0.463	1e-12
46116942	707	hypothetical protein FG04313.1 [Gibberel	0.696	0.097	0.463	1e-12
346319572	690	1,4-alpha-glucan branching enzyme [Cordy	0.696	0.1	0.434	1e-12
340515781	691	glycoside hydrolase family 13 [Trichoder	0.676	0.096	0.447	2e-12

>gi|380026836|ref|XP_003697146.1| PREDICTED: LOW QUALITY PROTEIN: 1,4-alpha-glucan-branching enzyme-like [Apis florea]

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 49/69 (71%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RLSPWATYVT+       Y+QRIW P P++ +K+  SK KKP++L+IYE HVGI TQE K
Sbjct: 146 RLSPWATYVTQDKSESATYKQRIWYPLPENVYKFKYSKQKKPESLRIYECHVGIATQELK 205

Query: 70  CASYEDFVR 78
             +Y +F +
Sbjct: 206 IGTYLEFAK 214

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321455046|gb|EFX66191.1| hypothetical protein DAPPUDRAFT_302911 [Daphnia pulex]

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 3/68 (4%)

Query: 10  RLSPWATYVTEPPV-VGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
           RLSPWA YV +PP   G AY+Q +WNP  Q K+++  S+PK+P++L+IYE HVGI T E 
Sbjct: 151 RLSPWAAYVVQPPPNEGCAYQQVVWNP--QHKYEFKHSRPKRPNSLRIYECHVGIATTEG 208

Query: 69  KCASYEDF 76
           K  SY++F
Sbjct: 209 KIGSYKEF 216

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720425|ref|XP_003398639.1| PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Bombus terrestris]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 49/68 (72%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RLSPWATYVT+       Y+QRIW+P  ++ +K+  SKPKKP++L+IYE HVGI TQE K
Sbjct: 146 RLSPWATYVTQNRAESVTYKQRIWHPSSENVYKFKYSKPKKPESLRIYECHVGIATQELK 205

Query: 70  CASYEDFV 77
             +Y +F 
Sbjct: 206 VGTYLEFA 213

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076104|ref|XP_968648.1| PREDICTED: similar to GA17312-PA [Tribolium castaneum] gi|270014582|gb|EFA11030.1| hypothetical protein TcasGA2_TC004619 [Tribolium castaneum]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 10  RLSPWATYVTEPPV-VGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
           RLSP+ATYV EPP   G  Y+Q+ WNP   +K+++  S+P KP  L+IYE HVGI T E 
Sbjct: 146 RLSPYATYVVEPPKDQGTIYKQKFWNPPNSEKYEFRHSRPAKPKGLRIYECHVGIATSEL 205

Query: 69  KCASYEDF 76
           K  SY++F
Sbjct: 206 KVGSYDNF 213

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863554|ref|XP_003707245.1| PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Megachile rotundata]

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/69 (49%), Positives = 48/69 (69%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RLSPWA YVT+       Y+QRIW+P  ++ +++   KPKKP++L+IYE HVGI TQE K
Sbjct: 146 RLSPWANYVTQNRAESATYKQRIWHPLSKNTYRFKYPKPKKPESLRIYECHVGIATQELK 205

Query: 70  CASYEDFVR 78
             +Y +F +
Sbjct: 206 VGTYLEFAK 214

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410058|ref|XP_003488932.1| PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Bombus impatiens]

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 49/67 (73%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RLSPWATYVT+       Y+QRIW+P  ++ +K+  SKPKKP++L+IYE HVGI T+E K
Sbjct: 146 RLSPWATYVTQNRAESVTYKQRIWHPSSENVYKFKYSKPKKPESLRIYECHVGIATEELK 205

Query: 70  CASYEDF 76
             +Y +F
Sbjct: 206 VGTYLEF 212

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|408395841|gb|EKJ75014.1| hypothetical protein FPSE_04834 [Fusarium pseudograminearum CS3096]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 47/69 (68%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RL  W  YVT+   V  AY+ R WNP   + +K+ +S+PKKP + ++YE+HVGI + EQK
Sbjct: 155 RLPAWIKYVTQDLSVSPAYDARFWNPPASETYKFKNSRPKKPTSARVYEAHVGISSPEQK 214

Query: 70  CASYEDFVR 78
            ASY++F +
Sbjct: 215 VASYKEFTK 223

Source: Fusarium pseudograminearum CS3096

Species: Fusarium pseudograminearum

Genus: Fusarium

Family: Nectriaceae

Order: Hypocreales

Class: Sordariomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|46116942|ref|XP_384489.1| hypothetical protein FG04313.1 [Gibberella zeae PH-1]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 47/69 (68%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RL  W  YVT+   V  AY+ R WNP   + +K+ +S+PKKP + ++YE+HVGI + EQK
Sbjct: 155 RLPAWIKYVTQDLSVSPAYDARFWNPPASETYKFKNSRPKKPASARVYEAHVGISSPEQK 214

Query: 70  CASYEDFVR 78
            ASY++F +
Sbjct: 215 VASYKEFTK 223

Source: Gibberella zeae PH-1

Species: Fusarium graminearum

Genus: Fusarium

Family: Nectriaceae

Order: Hypocreales

Class: Sordariomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|346319572|gb|EGX89173.1| 1,4-alpha-glucan branching enzyme [Cordyceps militaris CM01]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 47/69 (68%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           R+  W  YVT+   V   Y+ R WNP   +K+K+   +PKKP+++++YE+HVGI T EQ+
Sbjct: 140 RIPAWIKYVTQDLSVSPVYDARFWNPPASEKYKFKHPRPKKPESIRVYEAHVGISTPEQR 199

Query: 70  CASYEDFVR 78
            A+Y++F R
Sbjct: 200 VATYKEFTR 208

Source: Cordyceps militaris CM01

Species: Cordyceps militaris

Genus: Cordyceps

Family: Cordycipitaceae

Order: Hypocreales

Class: Sordariomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|340515781|gb|EGR46033.1| glycoside hydrolase family 13 [Trichoderma reesei QM6a]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 47/67 (70%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           RL  WA YVT+   V  AY+ R W+P+P DK+ +   +P+KP +++IYE+HVGI + EQ+
Sbjct: 141 RLPAWAKYVTQDLSVSPAYDARFWSPEPSDKYAFKHPRPQKPQSIRIYEAHVGISSPEQR 200

Query: 70  CASYEDF 76
             +Y++F
Sbjct: 201 VTTYDEF 207

Source: Trichoderma reesei QM6a

Species: Trichoderma reesei

Genus: Trichoderma

Family: Hypocreaceae

Order: Hypocreales

Class: Sordariomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
UNIPROTKB|G4NAD9	691	MGG_03186 "1,4-alpha-glucan-br	0.696	0.099	0.391	2.1e-11
FB|FBgn0053138	685	AGBE "1,4-Alpha-Glucan Branchi	0.676	0.097	0.428	5.5e-11
TAIR|locus:2092349	899	EMB2729 "EMBRYO DEFECTIVE 2729	0.676	0.074	0.457	1.7e-10
ZFIN|ZDB-GENE-110411-171	688	si:ch211-213e17.1 "si:ch211-21	0.686	0.098	0.436	3.1e-10
WB|WBGene00011409	681	T04A8.7 [Caenorhabditis elegan	0.656	0.095	0.455	3.9e-10
MGI|MGI:1921435	702	Gbe1 "glucan (1,4-alpha-), bra	0.727	0.102	0.487	4.1e-10
UNIPROTKB|F1SK65	319	F1SK65 "Uncharacterized protei	0.656	0.203	0.485	4.2e-10
UNIPROTKB|F1PX32	699	GBE1 "Uncharacterized protein"	0.656	0.092	0.5	6.7e-10
ASPGD|ASPL0000046871	684	AN2314 [Emericella nidulans (t	0.717	0.103	0.364	1.7e-09
UNIPROTKB|E9PGM4	661	GBE1 "1,4-alpha-glucan-branchi	0.727	0.108	0.461	2.1e-09

UNIPROTKB|G4NAD9 MGG_03186 "1,4-alpha-glucan-branching enzyme" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 167 (63.8 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 27/69 (39%), Positives = 46/69 (66%)

Query:    10 RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
             RL  W  YVT+   V  AY+ R WNP   +++ + + +PKKP ++++YE+HVGI + E +
Sbjct:   146 RLPAWIKYVTQDLSVSPAYDARFWNPPSSERYTFKNPRPKKPKSVRVYEAHVGISSPELR 205

Query:    70 CASYEDFVR 78
              A+Y++F +
Sbjct:   206 VATYKEFTK 214

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0053138 AGBE "1,4-Alpha-Glucan Branching Enzyme" [Drosophila melanogaster (taxid:7227)]

 Score = 163 (62.4 bits), Expect = 5.5e-11, P = 5.5e-11
 Identities = 30/70 (42%), Positives = 44/70 (62%)

Query:    10 RLSPWATYVTEPPVV---GHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
             RLSPWA YV +PP     G  Y+Q +W P   ++++     P +P +L+IYE HVGI +Q
Sbjct:   135 RLSPWAKYVVQPPKSANQGVNYKQYVWEPPSYERYQRQHPGPPRPKSLRIYECHVGIASQ 194

Query:    67 EQKCASYEDF 76
             E +  SY++F
Sbjct:   195 EPRVGSYDEF 204

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=ISS

GO:0005978 "glycogen biosynthetic process" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

GO:0008340 "determination of adult lifespan" evidence=IMP

TAIR|locus:2092349 EMB2729 "EMBRYO DEFECTIVE 2729" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 32/70 (45%), Positives = 44/70 (62%)

Query:    10 RLSPWATYVTEPPVVG-HAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
             R+  WATYV +P   G  AY    W P P+  +KW  SKPK P++L+IYE HVGI   E 
Sbjct:   355 RVPAWATYV-QPEDEGKQAYAIH-WEPSPEAAYKWKYSKPKVPESLRIYECHVGISGSEP 412

Query:    69 KCASYEDFVR 78
             K +++E+F +
Sbjct:   413 KVSTFEEFTK 422

GO:0003824 "catalytic activity" evidence=IEA

GO:0004556 "alpha-amylase activity" evidence=ISS

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS;IMP

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0043169 "cation binding" evidence=IEA

GO:0009536 "plastid" evidence=IDA

GO:0009791 "post-embryonic development" evidence=IMP

ZFIN|ZDB-GENE-110411-171 si:ch211-213e17.1 "si:ch211-213e17.1" [Danio rerio (taxid:7955)]

 Score = 156 (60.0 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 31/71 (43%), Positives = 48/71 (67%)

Query:     8 ILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQE 67
             + R+SPWA YVT+  V    Y+   W+P PQ  +++   +P +P +L+IYE+HVGI + E
Sbjct:   138 LFRISPWAKYVTKT-VDSVTYDWTHWDP-PQP-YQFQHPRPPRPSSLRIYEAHVGISSPE 194

Query:    68 QKCASYEDFVR 78
             +K ASY++F R
Sbjct:   195 EKIASYKNFTR 205

GO:0043169 "cation binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0005978 "glycogen biosynthetic process" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

WB|WBGene00011409 T04A8.7 [Caenorhabditis elegans (taxid:6239)]

 Score = 155 (59.6 bits), Expect = 3.9e-10, P = 3.9e-10
 Identities = 31/68 (45%), Positives = 45/68 (66%)

Query:    10 RLSPWATYVTEP-PVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
             +LSPWAT+VT P P     Y Q  WNP P+ K++   ++P +P +L+IYE+HVGI + E 
Sbjct:   135 KLSPWATFVTCPNPKETVIYHQNFWNP-PE-KYQLKEARPARPASLRIYEAHVGISSSEG 192

Query:    69 KCASYEDF 76
             K  +Y +F
Sbjct:   193 KINTYREF 200

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

MGI|MGI:1921435 Gbe1 "glucan (1,4-alpha-), branching enzyme 1" [Mus musculus (taxid:10090)]

 Score = 155 (59.6 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 38/78 (48%), Positives = 49/78 (62%)

Query:     1 MTEKIYSIL-RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYE 58
             +T K   IL R+SPWA YV  E   V   Y+   W   P+D +K+  S+PKKP +L+IYE
Sbjct:   146 ITSKSGEILYRISPWAKYVVRENNNVN--YDWIHW--APEDPYKFKHSRPKKPRSLRIYE 201

Query:    59 SHVGICTQEQKCASYEDF 76
             SHVGI + E K ASY+ F
Sbjct:   202 SHVGISSHEGKIASYKHF 219

GO:0003824 "catalytic activity" evidence=IEA

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=ISO

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0005978 "glycogen biosynthetic process" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISO

GO:0043169 "cation binding" evidence=IEA

UNIPROTKB|F1SK65 F1SK65 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 149 (57.5 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 34/70 (48%), Positives = 44/70 (62%)

Query:     8 ILRLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
             + R+SPWA YVT E   V   Y+   W+P  +  +K+  SKPKKP   +IYESHVGI + 
Sbjct:    89 LYRISPWAKYVTREGDNVN--YDWTHWDP--EHPYKFKHSKPKKPKGPRIYESHVGISSY 144

Query:    67 EQKCASYEDF 76
             E K ASY+ F
Sbjct:   145 EGKIASYKHF 154

GO:0043169 "cation binding" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

UNIPROTKB|F1PX32 GBE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 153 (58.9 bits), Expect = 6.7e-10, P = 6.7e-10
 Identities = 35/70 (50%), Positives = 45/70 (64%)

Query:     8 ILRLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
             + R+SPWA YVT E   V   Y+   W+P  +  +K+  SKPKKP  L+IYESHVGI + 
Sbjct:   151 LYRISPWAKYVTREGDNVN--YDWIHWDP--EHPYKFKHSKPKKPRGLRIYESHVGISSY 206

Query:    67 EQKCASYEDF 76
             E K ASY+ F
Sbjct:   207 EGKIASYKHF 216

GO:0043169 "cation binding" evidence=IEA

GO:0005978 "glycogen biosynthetic process" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=IEA

ASPGD|ASPL0000046871 AN2314 [Emericella nidulans (taxid:162425)]

 Score = 149 (57.5 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 27/74 (36%), Positives = 46/74 (62%)

Query:     3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG 62
             E+IY   R+  W   V +   V   YE   WNP   +++ +  ++PKKP++L+IYE+HVG
Sbjct:   132 ERIY---RIPAWIKRVVQDLNVSPIYESVFWNPPKAERYNFQHARPKKPESLRIYEAHVG 188

Query:    63 ICTQEQKCASYEDF 76
             I + + + A+Y++F
Sbjct:   189 ISSPDTRVATYKEF 202

GO:0005982 "starch metabolic process" evidence=RCA

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=IEA;RCA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

GO:0005978 "glycogen biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E9PGM4 GBE1 "1,4-alpha-glucan-branching enzyme" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%)

Query:     1 MTEKIYSIL-RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYE 58
             +T K   IL R+SPWA YV  E   V   Y+   W+P  +  +++  S+PKKP +L+IYE
Sbjct:   105 ITSKSGEILYRISPWAKYVVREGDNVN--YDWIHWDP--EHSYEFKHSRPKKPRSLRIYE 160

Query:    59 SHVGICTQEQKCASYEDF 76
             SHVGI + E K ASY+ F
Sbjct:   161 SHVGISSHEGKVASYKHF 178

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0005978 "glycogen biosynthetic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	99
PLN02960	897	PLN02960, PLN02960, alpha-amylase	6e-16
PLN03244	872	PLN03244, PLN03244, alpha-amylase; Provisional	7e-15
PLN02447	758	PLN02447, PLN02447, 1,4-alpha-glucan-branching enz	2e-13
cd11321	406	cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic	5e-13

>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase

 Score = 71.0 bits (174), Expect = 6e-16
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           R+  WATYV  P   G  +    W P P++ +KW   +PK P +L+IYE HVGI   E K
Sbjct: 353 RVPAWATYV-LPDPDGKQWYAIHWEPPPEEAYKWKFERPKVPKSLRIYECHVGISGSEPK 411

Query: 70  CASYEDFV 77
            +S+++F 
Sbjct: 412 ISSFKEFT 419

Length = 897

>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional

 Score = 68.1 bits (166), Expect = 7e-15
 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 10  RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
           R+  WATYV  P   G       W P P+  HKW + KPK P++L+IYE HVGI   E K
Sbjct: 358 RIPAWATYV-LPDDDGKQAFAIHWEPPPEAAHKWKNMKPKVPESLRIYECHVGISGSEPK 416

Query: 70  CASYEDFVR 78
            +S+E+F  
Sbjct: 417 ISSFEEFTE 425

Length = 872

>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 10  RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
           R+  W  Y    P  +G  Y    W+P  ++K+ +   +P +P  L+IYE+HVG+ ++E 
Sbjct: 185 RIPAWIKYAVQAPGEIGAPYNGVYWDPPEEEKYVFKHPRPPRPAALRIYEAHVGMSSEEP 244

Query: 69  KCASYEDF 76
           K  SY +F
Sbjct: 245 KVNSYREF 252

Length = 758

>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes

 Score = 62.6 bits (153), Expect = 5e-13
 Identities = 17/40 (42%), Positives = 29/40 (72%)

Query: 37 PQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDF 76
          P++ +++   +P KP  L+IYE+HVG+ ++E K ASY +F
Sbjct: 1  PEEPYQFKHPRPPKPRALRIYEAHVGMSSEEPKVASYREF 40

Branching enzymes (BEs) catalyze the formation of alpha-1,6 branch points in either glycogen or starch by cleavage of the alpha-1,4 glucosidic linkage yielding a non-reducing end oligosaccharide chain, and subsequent attachment to the alpha-1,6 position. By increasing the number of non-reducing ends, glycogen is more reactive to synthesis and digestion as well as being more soluble. This group includes bacterial and eukaryotic proteins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 406

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
PLN03244	872	alpha-amylase; Provisional	99.96
KOG0470|consensus	757		99.9
PLN02447	758	1,4-alpha-glucan-branching enzyme	99.85
PLN02960	897	alpha-amylase	99.7
PRK14706	639	glycogen branching enzyme; Provisional	99.38
PRK12313	633	glycogen branching enzyme; Provisional	99.35
PRK05402	726	glycogen branching enzyme; Provisional	99.27
COG0296	628	GlgB 1,4-alpha-glucan branching enzyme [Carbohydra	99.04
TIGR01515	613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	99.02
PRK12568	730	glycogen branching enzyme; Provisional	99.01
PRK14705	1224	glycogen branching enzyme; Provisional	98.89
TIGR02104	605	pulA_typeI pullulanase, type I. Pullulan is an unu	98.79
TIGR02402	542	trehalose_TreZ malto-oligosyltrehalose trehalohydr	98.67
PRK03705	658	glycogen debranching enzyme; Provisional	98.49
TIGR02102	1111	pullulan_Gpos pullulanase, extracellular, Gram-pos	98.34
TIGR02100	688	glgX_debranch glycogen debranching enzyme GlgX. Th	98.28
TIGR02103	898	pullul_strch alpha-1,6-glucosidases, pullulanase-t	98.0
PLN02877	970	alpha-amylase/limit dextrinase	97.7
COG1523	697	PulA Type II secretory pathway, pullulanase PulA a	97.18
PRK14510	1221	putative bifunctional 4-alpha-glucanotransferase/g	96.88
TIGR02456	539	treS_nterm trehalose synthase. Trehalose synthase	94.19
TIGR02403	543	trehalose_treC alpha,alpha-phosphotrehalase. Treha	92.06
PRK10933	551	trehalose-6-phosphate hydrolase; Provisional	90.21
smart00642	166	Aamy Alpha-amylase domain.	84.02

>PLN03244 alpha-amylase; Provisional

Probab=99.96  E-value=8.4e-30  Score=222.82  Aligned_cols=77  Identities=39%  Similarity=0.707  Sum_probs=72.4

Q ss_pred             cCceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCCCCCCccEEEeeeeccCCCCcccchHHhHhhhh
Q psy9005           3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHE   81 (99)
Q Consensus         3 ~~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~~p~~LrIYEaHVGmssee~kV~TY~eF~~~VL   81 (99)
                      .+|+ +|||||||+||+|+++ +..|+|+||+||.+++|+|+|++|++|.+||||||||||||+|+||+||+||+++|.
T Consensus       352 ~~g~-~~RiPaw~~~~~~~~~-~~~~~~~~w~P~~~~~y~~k~~~p~~p~~lrIYE~HvGms~~e~kv~ty~eF~~~vt  428 (872)
T PLN03244        352 PDGP-LERIPAWATYVLPDDD-GKQAFAIHWEPPPEAAHKWKNMKPKVPESLRIYECHVGISGSEPKISSFEEFTEKVT  428 (872)
T ss_pred             CCCC-cccCCCCeeeEEecCC-CCceeeeEeCCCcccCCccCCCCCCCCCCceEEEEEeeecCCCCCcccHHHHhhccC
Confidence            3455 9999999999999987 789999999999888999999999999999999999999999999999999999965

>KOG0470|consensus

Probab=99.90  E-value=1.5e-24  Score=188.02  Aligned_cols=89  Identities=30%  Similarity=0.511  Sum_probs=84.2

Q ss_pred             ccCceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCCCCC-CccEEEeee-eccCCCCcccc---hHHh
Q psy9005           2 TEKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPD-NLKIYESHV-GICTQEQKCAS---YEDF   76 (99)
Q Consensus         2 ~~~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~~p~-~LrIYEaHV-Gmssee~kV~T---Y~eF   76 (99)
                      |-.|+.++|+||||++++|+.. ..+|.+++|+|+++..|.|++++|+.|. +|||||||| |||+.|++|.|   |++|
T Consensus       178 ~p~g~~~~~~~~~~~~~~~~~~-~~q~~~~~~~~~~e~~w~~~~~~p~~P~~sL~IYE~HVrgfS~~E~~v~~~~gY~~F  256 (757)
T KOG0470|consen  178 TPYGETCKRIPAWATYVDQEGE-GPQYYGIYWDPSPEFDWGFKHSRPKIPESSLRIYELHVRGFSSHESKVNTRGGYLGF  256 (757)
T ss_pred             cCCcceeeccChHhhcccCCCc-ccceeeccCCCCCcccccccCCCCCCChhheEEEEEeeccccCCCCccccccchhhh
Confidence            3458899999999999999876 8999999999998899999999999997 999999999 99999999999   9999


Q ss_pred             HhhhhhhhhccCCcc
Q psy9005          77 VRVHEERNLAATVTS   91 (99)
Q Consensus        77 ~~~VLPrIk~lG~~~   91 (99)
                      |++||||||+||||.
T Consensus       257 teKvlphlK~LG~Na  271 (757)
T KOG0470|consen  257 TEKVLPHLKKLGYNA  271 (757)
T ss_pred             hhhhhhHHHHhCccc
Confidence            999999999999995

>PLN02447 1,4-alpha-glucan-branching enzyme

Probab=99.85  E-value=1.6e-21  Score=169.89  Aligned_cols=90  Identities=28%  Similarity=0.537  Sum_probs=81.5

Q ss_pred             CceeEEecCccceEEecCCCC-CCceeeEEeCCCCCCCeeeccCCCCCCCCccEEEeeeeccCCCCcccchHHhHhhhhh
Q psy9005           4 KIYSILRLSPWATYVTEPPVV-GHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEE   82 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~-~~~f~~~~w~P~~~~~Y~~k~~~p~~p~~LrIYEaHVGmssee~kV~TY~eF~~~VLP   82 (99)
                      +|++++|+||||++++|++.. +.+|++++|+|+.+++|+|++++|++|.+++|||||||+++++++++||++|++++||
T Consensus       179 ~g~~~~r~dpya~~~~~~p~~~~~~~~svv~dp~~~~~y~w~~~~~~~~~~~~IYE~Hvg~~~~~~~~gty~~~~~~~L~  258 (758)
T PLN02447        179 DGRWVDRIPAWIKYAVQAPGEIGAPYNGVYWDPPEEEKYVFKHPRPPRPAALRIYEAHVGMSSEEPKVNSYREFADDVLP  258 (758)
T ss_pred             CCcEEeecCchHheeeccCCccCCCCceEEeCCCCCCCCCCCCCCCCCCCCCEEEEEeCCcccCCCCCCCHHHHHHHHHH
Confidence            477899999999999998752 2489999999986678999999998889999999999999999999999999999999


Q ss_pred             hhhccCCcccc
Q psy9005          83 RNLAATVTSSW   93 (99)
Q Consensus        83 rIk~lG~~~~~   93 (99)
                      +||+||||.-|
T Consensus       259 ylk~LG~t~I~  269 (758)
T PLN02447        259 RIKALGYNAVQ  269 (758)
T ss_pred             HHHHcCCCEEE
Confidence            99999999754

>PLN02960 alpha-amylase

Probab=99.70  E-value=3.3e-17  Score=144.97  Aligned_cols=87  Identities=33%  Similarity=0.617  Sum_probs=78.0

Q ss_pred             eeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCCCCCCccEEEeeeeccCCCCcccchHHhHhhhhhhhh
Q psy9005           6 YSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNL   85 (99)
Q Consensus         6 ~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~~p~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk   85 (99)
                      ++++|+||||+++.++++ +..+..++|+|+...+|.|++.+|..+..+.|||+|||+++.+++++||++|++.+||+||
T Consensus       349 g~~~~vdpyA~~~qp~~~-~~~~~~v~~d~~~~~~y~W~~~~p~~~~~~vIYElHvg~~~~e~~~gtf~~~~e~~LdYLk  427 (897)
T PLN02960        349 GPLERVPAWATYVLPDPD-GKQWYAIHWEPPPEEAYKWKFERPKVPKSLRIYECHVGISGSEPKISSFKEFTQKVLPHVK  427 (897)
T ss_pred             CceEECCCcceeEeecCC-CccceEEEeCCCCCCCCCCCCCCCCCCCCcEEEEEecccccCCCCCCCHHHHHHHHHHHHH
Confidence            458999999999988876 6678999999864467999999887788999999999999999999999999999999999


Q ss_pred             ccCCcccc
Q psy9005          86 AATVTSSW   93 (99)
Q Consensus        86 ~lG~~~~~   93 (99)
                      +||||.-|
T Consensus       428 ~LGvt~Ie  435 (897)
T PLN02960        428 KAGYNAIQ  435 (897)
T ss_pred             HcCCCEEE
Confidence            99999754

>PRK14706 glycogen branching enzyme; Provisional

Probab=99.38  E-value=8.1e-13  Score=113.47  Aligned_cols=82  Identities=18%  Similarity=0.325  Sum_probs=67.1

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCC------CCCCccEEEeeeeccC--CCCcccchHH
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK------KPDNLKIYESHVGICT--QEQKCASYED   75 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~------~p~~LrIYEaHVGmss--ee~kV~TY~e   75 (99)
                      +|.++++++|||+++.+++. +   .+++|+++    |+|++..+.      .+.++.|||+|||+-+  .+++.+||++
T Consensus        97 ~g~~~~~~DPYa~~~~~~~~-~---~svv~~~~----~~w~d~~w~~~~~~~~~~~~~IYE~Hvg~f~~~~~g~~~ty~~  168 (639)
T PRK14706         97 AGQTVDKMDPYGSFFEVRPN-T---ASIIWEDR----FEWTDTRWMSSRTAGFDQPISIYEVHVGSWARRDDGWFLNYRE  168 (639)
T ss_pred             CCCEEeccCcceEEEecCCC-C---ceEECCCC----CCCCCcccccccCCccCCCcEEEEEehhhcccCCCCCccCHHH
Confidence            36778999999999998764 3   78999875    999987642      2356899999999964  3456899999


Q ss_pred             hHhhhhhhhhccCCcccc
Q psy9005          76 FVRVHEERNLAATVTSSW   93 (99)
Q Consensus        76 F~~~VLPrIk~lG~~~~~   93 (99)
                      +++++||+||+||||.-+
T Consensus       169 ~~~~l~~ylk~lG~t~ve  186 (639)
T PRK14706        169 LAHRLGEYVTYMGYTHVE  186 (639)
T ss_pred             HHHHHHHHHHHcCCCEEE
Confidence            999988999999999643

>PRK12313 glycogen branching enzyme; Provisional

Probab=99.35  E-value=1.5e-12  Score=110.58  Aligned_cols=85  Identities=19%  Similarity=0.307  Sum_probs=70.2

Q ss_pred             ccCceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCC--------CCCCccEEEeeeec--cCCCCccc
Q psy9005           2 TEKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK--------KPDNLKIYESHVGI--CTQEQKCA   71 (99)
Q Consensus         2 ~~~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~--------~p~~LrIYEaHVGm--ssee~kV~   71 (99)
                      +++|.++++.+||++.+.+.+. +   .+++|+|+   .|.|++....        ..+++.|||+|||.  .+++++.+
T Consensus        95 ~~~g~~~~~~DPya~~~~~~~~-~---~s~v~d~~---~~~w~~~~~~~~~~~~~~~~~~~~iYe~hv~~f~~~~~~~~g  167 (633)
T PRK12313         95 RQDGYQVEKIDPFAFYFEARPG-T---ASIVWDLP---EYKWKDGLWLARRKRWNALDRPISIYEVHLGSWKRNEDGRPL  167 (633)
T ss_pred             CCCCeEEecCCCceEEEecCCC-C---ceEECCCc---ccCCCChhhhhccccCCCCCCCceEEEEehhccccCCCCCcc
Confidence            3568889999999999988654 3   78999986   5999987531        12678999999996  45568899


Q ss_pred             chHHhHhhhhhhhhccCCcccc
Q psy9005          72 SYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        72 TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ||+++++.+||+||+||||.-|
T Consensus       168 ~~~~~~~~ll~yl~~LGv~~i~  189 (633)
T PRK12313        168 SYRELADELIPYVKEMGYTHVE  189 (633)
T ss_pred             CHHHHHHHHHHHHHHcCCCEEE
Confidence            9999999988999999999765

>PRK05402 glycogen branching enzyme; Provisional

Probab=99.27  E-value=9e-12  Score=107.61  Aligned_cols=84  Identities=15%  Similarity=0.173  Sum_probs=69.8

Q ss_pred             cCceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCC--------CCCCccEEEeeeeccC---CCCccc
Q psy9005           3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK--------KPDNLKIYESHVGICT---QEQKCA   71 (99)
Q Consensus         3 ~~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~--------~p~~LrIYEaHVGmss---ee~kV~   71 (99)
                      ++|.++++++||++.+...+. +   .+++++|+   .|+|+++...        ..+++.|||+|||.-+   ++++.+
T Consensus       190 ~~g~~~~~~DPYa~~~~~~~~-~---~s~v~d~~---~~~w~~~~~~~~~~~~~~~~~~~~iYe~hv~~f~~~~~~~~~g  262 (726)
T PRK05402        190 ADGELLLKADPYAFAAEVRPA-T---ASIVADLS---QYQWNDAAWMEKRAKRNPLDAPISIYEVHLGSWRRHEDGGRFL  262 (726)
T ss_pred             CCCcEeecCCCceEEEecCCC-C---cEEEeCCc---cCCCCCcchhhcccccCcccCCcEEEEEehhhhccCCCCCccc
Confidence            457888999999999999764 3   68999985   5999887542        2367999999999954   567899


Q ss_pred             chHHhHhhhhhhhhccCCcccc
Q psy9005          72 SYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        72 TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ||+++++.+||+||+||||.-|
T Consensus       263 ~~~~i~~~l~~ylk~LGv~~i~  284 (726)
T PRK05402        263 SYRELADQLIPYVKEMGFTHVE  284 (726)
T ss_pred             CHHHHHHHHHHHHHHcCCCEEE
Confidence            9999999988999999999754

>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]

Probab=99.04  E-value=3.5e-10  Score=97.83  Aligned_cols=80  Identities=18%  Similarity=0.181  Sum_probs=65.2

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccC----CCC--CCCCccEEEeeeeccCCCCcccchHHhH
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSS----KPK--KPDNLKIYESHVGICTQEQKCASYEDFV   77 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~----~p~--~p~~LrIYEaHVGmssee~kV~TY~eF~   77 (99)
                      .|......+|++++.-+.+. +   ..++++++   .|+|+..    +.+  .-+++.|||+|||.-+++ +.-+|.|.+
T Consensus        96 ~g~~~~~~DP~a~~~~~~p~-~---aS~v~~~~---~y~W~d~~~~~~~~~~~~e~~vIYElHvGs~~~~-~~~~~~e~a  167 (628)
T COG0296          96 SGQLRLKADPYARRQEVGPH-T---ASQVVDLP---DYEWQDERWDRAWRGRFWEPIVIYELHVGSFTPD-RFLGYFELA  167 (628)
T ss_pred             CCceeeccCchhhccCCCCC-C---cceecCCC---CcccccccccccccCCCCCCceEEEEEeeeccCC-CCcCHHHHH
Confidence            34567788899999766554 4   78999986   2999944    332  237999999999998887 999999999


Q ss_pred             hhhhhhhhccCCcc
Q psy9005          78 RVHEERNLAATVTS   91 (99)
Q Consensus        78 ~~VLPrIk~lG~~~   91 (99)
                      +..||+||+||||-
T Consensus       168 ~~llpYl~elG~T~  181 (628)
T COG0296         168 IELLPYLKELGITH  181 (628)
T ss_pred             HHHhHHHHHhCCCE
Confidence            99999999999984

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase

Probab=99.02  E-value=4.7e-10  Score=95.44  Aligned_cols=80  Identities=20%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCee-----eccCCCCC-C--CCccEEEeeeeccCCCCcccchHH
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHK-----WTSSKPKK-P--DNLKIYESHVGICTQEQKCASYED   75 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~-----~k~~~p~~-p--~~LrIYEaHVGmssee~kV~TY~e   75 (99)
                      +|+...+++|||+.+.+++. +   .+++.+|+   .|.     |++.++++ |  +++.|||+|||.-+.+   +||+.
T Consensus        88 ~g~~~~~~DPYA~~~~~~~~-~---~s~v~d~~---~~~w~~~~w~~~~~~~~~~~~~~~iYe~hv~~~~~~---g~~~~  157 (613)
T TIGR01515        88 NGEIRLKADPYAFYAEVRPN-T---ASLVYDLE---GYSWQDQKWQEKRKAKTPYEKPVSIYELHLGSWRHG---LSYRE  157 (613)
T ss_pred             CCcEEEeCCCCEeeeccCCC-C---cEEEECCc---cCccCchhhhhcccccCcccCCceEEEEehhhccCC---CCHHH
Confidence            45677899999999988654 3   56777765   354     44444322 2  4688999999997755   99999


Q ss_pred             hHhhhhhhhhccCCcccc
Q psy9005          76 FVRVHEERNLAATVTSSW   93 (99)
Q Consensus        76 F~~~VLPrIk~lG~~~~~   93 (99)
                      +++++||+||+||||.-|
T Consensus       158 i~~~l~dyl~~LGvt~i~  175 (613)
T TIGR01515       158 LADQLIPYVKELGFTHIE  175 (613)
T ss_pred             HHHHHHHHHHHcCCCEEE
Confidence            999988999999999755

A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.

>PRK12568 glycogen branching enzyme; Provisional

Probab=99.01  E-value=6.9e-10  Score=97.27  Aligned_cols=83  Identities=17%  Similarity=0.162  Sum_probs=65.4

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCC-------CCCCCccEEEeeeeccC--CCCcccchH
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKP-------KKPDNLKIYESHVGICT--QEQKCASYE   74 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p-------~~p~~LrIYEaHVGmss--ee~kV~TY~   74 (99)
                      +|....+++|||+.+..+++ +   ..+++++.   .|.|++...       ..+.++.|||+|||.-+  .+.+.++|+
T Consensus       197 ~G~~~~k~DPYA~~~e~~p~-~---asvV~~~~---~~~W~d~~W~~~r~~~~~~~~~~IYEvHvgsf~~~~~~~~~~~~  269 (730)
T PRK12568        197 DGRVLLKADPVARQTELPPA-T---ASVVPSAA---AFAWTDAAWMARRDPAAVPAPLSIYEVHAASWRRDGHNQPLDWP  269 (730)
T ss_pred             CCeEeecCCCcceEeecCCC-C---CeEEcCCC---CCCCCChhhhhcccccCCCCCcEEEEEEhHHhcCCCCCCCCCHH
Confidence            46677899999999988664 3   67787754   488877632       23478999999999843  445688999


Q ss_pred             HhHhhhhhhhhccCCcccc
Q psy9005          75 DFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        75 eF~~~VLPrIk~lG~~~~~   93 (99)
                      ++++..||+||+||||.-|
T Consensus       270 ~la~~ll~ylk~LGvt~I~  288 (730)
T PRK12568        270 TLAEQLIPYVQQLGFTHIE  288 (730)
T ss_pred             HHHHHHHHHHHHcCCCEEE
Confidence            9999999999999999654

>PRK14705 glycogen branching enzyme; Provisional

Probab=98.89  E-value=2.7e-09  Score=97.70  Aligned_cols=80  Identities=14%  Similarity=0.160  Sum_probs=64.4

Q ss_pred             cCceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCC-----C---CCCCccEEEeeeeccCCCCcccchH
Q psy9005           3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKP-----K---KPDNLKIYESHVGICTQEQKCASYE   74 (99)
Q Consensus         3 ~~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p-----~---~p~~LrIYEaHVGmssee~kV~TY~   74 (99)
                      .+|+++++.+||++++.+++. +   .++++++.    |+|+++..     +   ...++.|||+|||.=+.   -+||+
T Consensus       697 ~~g~~~~k~DPyA~~~e~~p~-~---aS~V~d~~----~~w~d~~W~~~r~~~~~~~~p~~IYEvHvgsf~~---~~~~~  765 (1224)
T PRK14705        697 KAGQWVEKADPLAFGTEVPPL-T---ASRVVEAS----YAFKDAEWMSARAERDPHNSPMSVYEVHLGSWRL---GLGYR  765 (1224)
T ss_pred             CCCcEEecCCccccccccCCC-C---CeEEeCCC----CCcCChhhhhccccCCCCcCCcEEEEEEeccccc---CCchH
Confidence            357788999999999888664 3   67999985    99988643     1   13679999999998654   37999


Q ss_pred             HhHhhhhhhhhccCCcccc
Q psy9005          75 DFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        75 eF~~~VLPrIk~lG~~~~~   93 (99)
                      ++++..||+||+||||.-|
T Consensus       766 ~l~~~lldYlk~LGvt~Ie  784 (1224)
T PRK14705        766 ELAKELVDYVKWLGFTHVE  784 (1224)
T ss_pred             HHHHHHHHHHHHhCCCEEE
Confidence            9999999999999999754

>TIGR02104 pulA_typeI pullulanase, type I

Probab=98.79  E-value=5.5e-09  Score=88.64  Aligned_cols=84  Identities=17%  Similarity=0.200  Sum_probs=63.2

Q ss_pred             ceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCC-C--CCCCCccEEEeeeeccCCCC-----cccchHHh
Q psy9005           5 IYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSK-P--KKPDNLKIYESHVGICTQEQ-----KCASYEDF   76 (99)
Q Consensus         5 ~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~-p--~~p~~LrIYEaHVGmssee~-----kV~TY~eF   76 (99)
                      +.+...++|||+.+..+..     .+++.+|...+++.|.+.+ |  ..+..+.|||+||+.-+..+     ..|||..|
T Consensus        81 ~~~~~~~DPya~~~~~~~~-----~s~v~d~~~~~~~~w~~~~~~~~~~~~~~vIYElhv~~ft~~~~~~~~~~G~f~~~  155 (605)
T TIGR02104        81 GKWRETVDPYAKAVTVNGK-----RGAVIDLERTNPEGWEKDHRPRLENPEDAIIYELHIRDFSIHENSGVKNKGKYLGL  155 (605)
T ss_pred             CCeEEEcCCCcceeccCCC-----cEEEEcccccCccCcccccCCCCCChhHcEEEEEecchhccCCCCCcCCCCceeee
Confidence            4456789999999887542     5678888644567888765 4  34578899999999833222     26999999


Q ss_pred             Hhh----------hhhhhhccCCcccc
Q psy9005          77 VRV----------HEERNLAATVTSSW   93 (99)
Q Consensus        77 ~~~----------VLPrIk~lG~~~~~   93 (99)
                      ++.          .||+||+||||.-|
T Consensus       156 ~e~~~~~~~g~~~~LdyL~~LGvt~I~  182 (605)
T TIGR02104       156 TETGTKGPNGVSTGLDYLKELGVTHVQ  182 (605)
T ss_pred             eccCccccccchhHHHHHHHcCCCEEE
Confidence            986          59999999999765

Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.

>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase

Probab=98.67  E-value=3.5e-08  Score=83.21  Aligned_cols=75  Identities=16%  Similarity=0.209  Sum_probs=60.8

Q ss_pred             EEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCC--CCCCccEEEeeeeccCCCCcccchHHhHhhhhhhhh
Q psy9005           8 ILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK--KPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNL   85 (99)
Q Consensus         8 ~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~--~p~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk   85 (99)
                      ...++||++.+....+ +   .+++++|.   .|+|+++.++  +...+.|||+|||.-+.   -|+|+.+++. ||+||
T Consensus        53 ~~v~DPya~~~~~~~~-~---~S~V~d~~---~~~w~~~~~~~~~~~~~viYE~hv~~f~~---~G~~~gi~~~-l~yl~  121 (542)
T TIGR02402        53 TPVPDPASRRQPDGVH-G---PSQVVDPD---RYAWQDTGWRGRPLEEAVIYELHVGTFTP---EGTFDAAIEK-LPYLA  121 (542)
T ss_pred             EEecCccccccccCCC-C---CeEEecCc---ccCCCCccccCCCccccEEEEEEhhhcCC---CCCHHHHHHh-hHHHH
Confidence            4568899998654433 3   58999986   4999998763  34789999999999775   5899999998 89999


Q ss_pred             ccCCcccc
Q psy9005          86 AATVTSSW   93 (99)
Q Consensus        86 ~lG~~~~~   93 (99)
                      +||||.-|
T Consensus       122 ~LGv~~i~  129 (542)
T TIGR02402       122 DLGITAIE  129 (542)
T ss_pred             HcCCCEEE
Confidence            99999765

Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.

>PRK03705 glycogen debranching enzyme; Provisional

Probab=98.49  E-value=2.2e-07  Score=80.55  Aligned_cols=82  Identities=17%  Similarity=0.103  Sum_probs=57.7

Q ss_pred             EEecCccceEEecCCCCCC-----------------ceeeEEeCCCCCCCeeeccCCCCC--CCCccEEEeeeec-cCC-
Q psy9005           8 ILRLSPWATYVTEPPVVGH-----------------AYEQRIWNPKPQDKHKWTSSKPKK--PDNLKIYESHVGI-CTQ-   66 (99)
Q Consensus         8 ~dRIPawa~~v~q~~~~~~-----------------~f~~~~w~P~~~~~Y~~k~~~p~~--p~~LrIYEaHVGm-sse-   66 (99)
                      ..-++|||+.+......+.                 ...+++.++    +|.|+++.++.  ...+.|||+||+- +.. 
T Consensus        90 ~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~----~~~W~~~~~p~~~~~~~vIYE~hvr~ft~~~  165 (658)
T PRK03705         90 KLLIDPCARQVEGEVKDDPRLHGGHDEPDYRDNAAIAPKCVVVDD----HYDWEDDAPPRTPWGSTVIYEAHVRGLTYLH  165 (658)
T ss_pred             cEecCcCceEEccccccCccccccccCCccccccccCCceEEecC----CCCCCCCCCCCCCccccEEEEEehhhhcccC
Confidence            3458999999986421111                 124556554    49999876642  3788999999964 322 


Q ss_pred             ----CCcccchHHhHhh-hhhhhhccCCcccc
Q psy9005          67 ----EQKCASYEDFVRV-HEERNLAATVTSSW   93 (99)
Q Consensus        67 ----e~kV~TY~eF~~~-VLPrIk~lG~~~~~   93 (99)
                          ...-|||+-+++. .|++||+||||.-|
T Consensus       166 ~~~~~~~~Gtf~g~~~~~~LdYLk~LGvt~I~  197 (658)
T PRK03705        166 PEIPVEIRGTYAALGHPVMIAYLKQLGITALE  197 (658)
T ss_pred             CCCCccccccHHHhhcccchHHHHHcCCCEEE
Confidence                2346999999985 59999999999765

>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive

Probab=98.34  E-value=1.2e-06  Score=80.15  Aligned_cols=89  Identities=19%  Similarity=0.229  Sum_probs=61.9

Q ss_pred             CceeEEecCccceEEec-CCC----CCCceeeEEeCCCCC--CCeeeccCCC-CCCCCccEEEeeeeccCCC--------
Q psy9005           4 KIYSILRLSPWATYVTE-PPV----VGHAYEQRIWNPKPQ--DKHKWTSSKP-KKPDNLKIYESHVGICTQE--------   67 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q-~~~----~~~~f~~~~w~P~~~--~~Y~~k~~~p-~~p~~LrIYEaHVGmssee--------   67 (99)
                      +++....++|||+.+.. +..    ......+++++++.-  +.|.|.+..+ .++..+.|||+||+--+..        
T Consensus       394 ~~~~~~~~DPYA~al~~~n~~~~~~~~~~~ks~vvD~~~~~p~~~~~~~~~~~~~~~d~vIYElHVrdFt~d~~~~~~~~  473 (1111)
T TIGR02102       394 GGDKVLALDPYAKSLAAWNDATSDDQIKVAKAAFVDPSSLGPQELDFAKIENFKKREDAIIYEAHVRDFTSDPAIAGDLT  473 (1111)
T ss_pred             CCceEEEeChhheEEeccCcccccccCCCCceEEEcCcccCccccccccccccCCccceEEEEEechhhCcCCCCCcccc
Confidence            34566778999999874 210    012235788887532  2477876333 4568899999999973321        


Q ss_pred             CcccchHHhHhhhhhhhhccCCcccc
Q psy9005          68 QKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        68 ~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||+-|++. |++||+||||.-|
T Consensus       474 ~~~Gtf~gl~ek-LdYLkeLGVT~I~  498 (1111)
T TIGR02102       474 AQFGTFAAFVEK-LDYLQDLGVTHIQ  498 (1111)
T ss_pred             cCCcCHHHHHHh-HHHHHHcCCCEEE
Confidence            136999999999 8999999999755

Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).

>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX

Probab=98.28  E-value=1.2e-06  Score=76.23  Aligned_cols=82  Identities=20%  Similarity=0.256  Sum_probs=58.7

Q ss_pred             EEecCccceEEecCCCC------------------------CCceeeEEeCCCCCCCeeeccC--CCCC-CCCccEEEee
Q psy9005           8 ILRLSPWATYVTEPPVV------------------------GHAYEQRIWNPKPQDKHKWTSS--KPKK-PDNLKIYESH   60 (99)
Q Consensus         8 ~dRIPawa~~v~q~~~~------------------------~~~f~~~~w~P~~~~~Y~~k~~--~p~~-p~~LrIYEaH   60 (99)
                      ...++|||+.+..+...                        .....+++.+++    |.|++.  +|.. ...+.|||+|
T Consensus        87 ~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d~~----~~w~~~~~~p~~~~~d~iIYE~h  162 (688)
T TIGR02100        87 KLLLDPYAKALDGDLIWDDALFGYRIGHPDQDLSFDERDSAPGMPKAVVVDPD----FDWGGDEQRPRTPWEDTIIYEAH  162 (688)
T ss_pred             ceecCcCceeecCCCcccccccccccccccccccccccccccccCceEEeCCC----CCCCCcccCCCCCccccEEEEEE
Confidence            45689999999765210                        011256777765    999876  3433 3788999999


Q ss_pred             eec-cCC-----CCcccchHHhHhh-hhhhhhccCCcccc
Q psy9005          61 VGI-CTQ-----EQKCASYEDFVRV-HEERNLAATVTSSW   93 (99)
Q Consensus        61 VGm-sse-----e~kV~TY~eF~~~-VLPrIk~lG~~~~~   93 (99)
                      |+- +..     +...|||+-++++ .||+||+||||.-|
T Consensus       163 vr~Ft~~~~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~  202 (688)
T TIGR02100       163 VKGFTQLHPDIPEELRGTYAGLAHPAMIDYLKKLGVTAVE  202 (688)
T ss_pred             hHHhcCCCCCCCcccccCHHHHhccchhHHHHHcCCCEEE
Confidence            976 321     2345999999995 79999999999765

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.

>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type

Probab=98.00  E-value=8.7e-06  Score=73.18  Aligned_cols=81  Identities=16%  Similarity=0.275  Sum_probs=56.2

Q ss_pred             eeEEecCccceEEecCCCCCCceeeEEeCCCCC--CCeeeccCC---CC--CCCCccEEEeeeeccC------CCCcccc
Q psy9005           6 YSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQ--DKHKWTSSK---PK--KPDNLKIYESHVGICT------QEQKCAS   72 (99)
Q Consensus         6 ~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~--~~Y~~k~~~---p~--~p~~LrIYEaHVGmss------ee~kV~T   72 (99)
                      +....++|||+.+..+..     .++++++...  ++..|...+   |.  .+..+.|||+||+==|      ++..-|+
T Consensus       203 ~~~~v~DPYA~als~n~~-----~S~VvDl~~~~~~p~~W~~~~~p~p~~~~~~d~iIYElHVRDFS~~d~s~~~~~rGt  277 (898)
T TIGR02103       203 ETYLVTDPYSVSLSANSE-----YSQVVDLNDPALKPEGWDALAMPKPQLASFADMVLYELHIRDFSANDESVPAELRGK  277 (898)
T ss_pred             CCeEEeCcCcceEcCCCC-----CeEEeCCccccCCCcchhhcccccCCcCCCcccEEEEEeccccccCCCCCCcCcCce
Confidence            346679999999876432     5677776431  456787654   32  4588999999999722      2234599


Q ss_pred             hHHhHhh------hhhhhhccCCcc
Q psy9005          73 YEDFVRV------HEERNLAATVTS   91 (99)
Q Consensus        73 Y~eF~~~------VLPrIk~lG~~~   91 (99)
                      |.-|++.      .|+.+++||+|.
T Consensus       278 Yla~tE~~t~gi~hLk~L~eLGVTh  302 (898)
T TIGR02103       278 YLAFTAADSAGVQHLKKLADAGVTH  302 (898)
T ss_pred             eeehhccchhhhHHHHHHHhCCCcE
Confidence            9999986      466666789985

Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).

>PLN02877 alpha-amylase/limit dextrinase

Probab=97.70  E-value=7.4e-05  Score=67.90  Aligned_cols=80  Identities=19%  Similarity=0.273  Sum_probs=51.1

Q ss_pred             eEEecCccceEEecCCCCCCceeeEEeCCCC--CCCeeecc---CCC--CCCCCccEEEeeeec-cCCC-----Ccccch
Q psy9005           7 SILRLSPWATYVTEPPVVGHAYEQRIWNPKP--QDKHKWTS---SKP--KKPDNLKIYESHVGI-CTQE-----QKCASY   73 (99)
Q Consensus         7 ~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~--~~~Y~~k~---~~p--~~p~~LrIYEaHVGm-ssee-----~kV~TY   73 (99)
                      ...-++|||+-+..+..     .+++-++..  -++..|..   ++|  ..+..+.|||+||+= +...     ..-|||
T Consensus       291 ~~~v~DPYA~als~ng~-----~S~vvDl~~~~~~p~gW~~~~~~~p~~~~~~D~VIYElHVRDFS~~d~sv~~~~RGty  365 (970)
T PLN02877        291 TCYANDPYARGLSADGR-----RTLLVDLDSDDLKPEGWDNLAKEKPCLLSFSDISIYELHVRDFSANDETVHPDFRGGY  365 (970)
T ss_pred             ccccCCccceEEecCCC-----ceEEECCccccCCChhhhhcccccCccCCCcccEEEEEeccccccCCCCCCcCCCCcc
Confidence            44568999999876432     233334331  13456765   344  245789999999996 3222     234999


Q ss_pred             HHhHhh------hhhhhhccCCcc
Q psy9005          74 EDFVRV------HEERNLAATVTS   91 (99)
Q Consensus        74 ~eF~~~------VLPrIk~lG~~~   91 (99)
                      .-|++.      .|+.+++||+|.
T Consensus       366 lgftE~~s~gi~hLk~LkelGVTh  389 (970)
T PLN02877        366 LAFTSQDSAGVLHLKKLADAGLTH  389 (970)
T ss_pred             hhhhhhhhhHHHHHHHHHHcCCCE
Confidence            999986      355666669985

>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]

Probab=97.18  E-value=0.00048  Score=60.80  Aligned_cols=51  Identities=25%  Similarity=0.380  Sum_probs=39.9

Q ss_pred             eeeccCCCC-CC-CCccEEEeeeec-c-----CCCCcccchHHhHhh-hhhhhhccCCcc
Q psy9005          41 HKWTSSKPK-KP-DNLKIYESHVGI-C-----TQEQKCASYEDFVRV-HEERNLAATVTS   91 (99)
Q Consensus        41 Y~~k~~~p~-~p-~~LrIYEaHVGm-s-----see~kV~TY~eF~~~-VLPrIk~lG~~~   91 (99)
                      |.|+.++|+ .| ....|||+||.= +     .++..-|||.-|++. +|+++|+||+|.
T Consensus       157 ~~w~~~~~~~~p~~~~vIYE~HVr~fT~~~~~v~~~~rGTy~gl~~~~~i~yLk~LGvta  216 (697)
T COG1523         157 FDWENDKPPRIPWEDTVIYEAHVRDFTQLHPGVPEELRGTYLGLAEPVIIDYLKDLGVTA  216 (697)
T ss_pred             cccccCCCCCCCccceEEEEeeecccccCCCCCchhhccceehhccccHHHHHHHhCCce
Confidence            889888664 34 788899999964 3     234445999999886 599999999985

>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional

Probab=96.88  E-value=0.0012  Score=61.09  Aligned_cols=54  Identities=13%  Similarity=0.134  Sum_probs=39.5

Q ss_pred             CeeeccCCCC-CC-CCccEEEeeeec-cCC-----CCcccchHHhH-hhhhhhhhccCCcccc
Q psy9005          40 KHKWTSSKPK-KP-DNLKIYESHVGI-CTQ-----EQKCASYEDFV-RVHEERNLAATVTSSW   93 (99)
Q Consensus        40 ~Y~~k~~~p~-~p-~~LrIYEaHVGm-sse-----e~kV~TY~eF~-~~VLPrIk~lG~~~~~   93 (99)
                      +|.|...++. .| ....|||+||+- +..     ..--|+|+.+. ...||+||+||||.-|
T Consensus       143 ~~~W~~~~~~~~~~~d~vIYE~hvr~ft~~~~~~gg~~~Gt~~~l~~~~~i~yLk~LGvt~I~  205 (1221)
T PRK14510        143 PFTWAPRSPLHGDWDDSPLYEMNVRGFTLRHDFFPGNLRGTFAKLAAPEAISYLKKLGVSIVE  205 (1221)
T ss_pred             ccccCCCCCCCCCcccCeEEEEccchhhccCCCCCcccCcHHhhcCCchhHHHHHHcCCCEEE
Confidence            4889877653 23 566799999965 322     23358999999 3469999999999755

>TIGR02456 treS_nterm trehalose synthase

Probab=94.19  E-value=0.04  Score=46.45  Aligned_cols=40  Identities=15%  Similarity=0.199  Sum_probs=33.5

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||.||.-  .+....+|+++-.+++ ||+|++||+|.-|
T Consensus         5 ~~viYqi~~~~f~d~~~~~~Gdl~gi~~~-Ldyl~~LGv~~i~   46 (539)
T TIGR02456         5 DAVFYEVHVRSFFDSNGDGIGDFPGLTSK-LDYLKWLGVDALW   46 (539)
T ss_pred             cceEEEEehhHhhcCCCCCccCHHHHHHh-HHHHHHCCCCEEE
Confidence            45699999987  3334569999999998 9999999999876

Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).

>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase

Probab=92.06  E-value=0.13  Score=43.63  Aligned_cols=41  Identities=10%  Similarity=0.043  Sum_probs=33.8

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCccccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSWK   94 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~~   94 (99)
                      ...|||.|+.-  .+....+|+++..++. |++|++||||.-|-
T Consensus         4 ~~v~Y~i~~~~f~~~~~~~~G~~~gi~~~-l~yl~~lG~~~i~l   46 (543)
T TIGR02403         4 KKVIYQIYPKSFYDSTGDGTGDLRGIIEK-LDYLKKLGVDYIWL   46 (543)
T ss_pred             cCEEEEEEhHHHhcCCCCCccCHHHHHHh-HHHHHHcCCCEEEE
Confidence            34699999987  3445668999999998 89999999998763

Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.

>PRK10933 trehalose-6-phosphate hydrolase; Provisional

Probab=90.21  E-value=0.25  Score=42.19  Aligned_cols=41  Identities=15%  Similarity=0.054  Sum_probs=33.7

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCccccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSWK   94 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~~   94 (99)
                      .-.||+.++.-  .+....+|+++..+++ |++|++||+|.-|-
T Consensus        10 ~~v~Yqi~~~~f~d~~~~~~Gdl~gi~~~-ldyl~~lGv~~i~l   52 (551)
T PRK10933         10 NGVIYQIYPKSFQDTTGSGTGDLRGVTQR-LDYLQKLGVDAIWL   52 (551)
T ss_pred             cCeEEEEEchHhhcCCCCCCcCHHHHHHh-hHHHHhCCCCEEEE
Confidence            34699999987  3445668999999998 99999999998763

>smart00642 Aamy Alpha-amylase domain

Probab=84.02  E-value=0.77  Score=33.33  Aligned_cols=23  Identities=13%  Similarity=0.196  Sum_probs=21.4

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+++..+++ |++|++||||.-|
T Consensus        15 ~G~~~gi~~~-l~yl~~lG~~~I~   37 (166)
T smart00642       15 GGDLQGIIEK-LDYLKDLGVTAIW   37 (166)
T ss_pred             CcCHHHHHHH-HHHHHHCCCCEEE
Confidence            8999999998 9999999999866

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	99
3aml_A	755	Structure Of The Starch Branching Enzyme I (Bei) Fr		1e-06
3amk_A	702	Structure Of The Starch Branching Enzyme I (Bei) Fr		1e-06

>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10  RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
           R+  W  Y T +    G  Y+   W+P   +++ +   +P KPD  +IYE+HVG+  +E 
Sbjct: 136 RIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEP 195
Query: 69  KCASYEDF 76
           + ++Y +F
Sbjct: 196 EVSTYREF 203

>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10  RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
           R+  W  Y T +    G  Y+   W+P   +++ +   +P KPD  +IYE+HVG+  +E 
Sbjct: 136 RIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEP 195
Query: 69  KCASYEDF 76
           + ++Y +F
Sbjct: 196 EVSTYREF 203

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	99
3aml_A	755	OS06G0726400 protein; starch-branching, transferas	2e-15

>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755

 Score = 68.9 bits (169), Expect = 2e-15
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 8   ILRLSPWATYVTEPP-VVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
           + R+  W  Y T      G  Y+   W+P   +++ +   +P KPD  +IYE+HVG+  +
Sbjct: 134 VDRIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGE 193

Query: 67  EQKCASYEDF 76
           E + ++Y +F
Sbjct: 194 EPEVSTYREF 203

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
3aml_A	755	OS06G0726400 protein; starch-branching, transferas	99.66
1m7x_A	617	1,4-alpha-glucan branching enzyme; alpha/beta barr	98.93
3k1d_A	722	1,4-alpha-glucan-branching enzyme; mycobacterium t	98.82
2wsk_A	657	Glycogen debranching enzyme; carbohydrate metaboli	98.7
3vgf_A	558	Malto-oligosyltrehalose trehalohydrolase; alpha/be	98.56
4aio_A	884	Limit dextrinase; hydrolase, pullulanase, glycosid	98.56
1bf2_A	750	Isoamylase; hydrolase, glycosidase, debranching en	98.55
3m07_A	618	Putative alpha amylase; IDP00968, csgid, structura	98.51
2bhu_A	602	Maltooligosyltrehalose trehalohydrolase; alpha-amy	98.46
2vr5_A	718	Glycogen operon protein GLGX; hydrolase, glycosida	98.38
2ya0_A	714	Putative alkaline amylopullulanase; hydrolase, gly	98.34
2e8y_A	718	AMYX protein, pullulanase; multiple domain, beta-a	98.34
2wan_A	921	Pullulanase; hydrolase, glycoside hydrolase, polys	98.28
2ya1_A	1014	Putative alkaline amylopullulanase; hydrolase, gly	98.16
3faw_A	877	Reticulocyte binding protein; TIM barrel, beta bar	98.13
2fhf_A	1083	Pullulanase; multiple domain, beta-alpha-barrel, a	97.97
1lwj_A	441	4-alpha-glucanotransferase; alpha-amylase family,	96.77
4aie_A	549	Glucan 1,6-alpha-glucosidase; hydrolase, glycoside	96.75
1gjw_A	637	Maltodextrin glycosyltransferase; alpha-amylase, m	96.62
2dh2_A	424	4F2 cell-surface antigen heavy chain; TIM-barrel,	96.48
1zja_A	557	Trehalulose synthase; sucrose isomerase, alpha-amy	96.47
3k8k_A	669	Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet	96.43
2zic_A	543	Dextran glucosidase; TIM barrel, (beta/alpha)8-bar	95.89
1wza_A	488	Alpha-amylase A; hydrolase, halophilic, thermophil	95.74
1m53_A	570	Isomaltulose synthase; klebsiella SP. LX3, sucrose	95.66
3aj7_A	589	Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro	95.63
3dhu_A	449	Alpha-amylase; structural genomics, hydrolase, gly	95.59
2guy_A	478	Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase;	95.54
2ze0_A	555	Alpha-glucosidase; TIM barrel, glucoside hydrolase	95.43
3zss_A	695	Putative glucanohydrolase PEP1A; alpha-glucan bios	95.2
1uok_A	558	Oligo-1,6-glucosidase; sugar degradation, hydrolas	95.13
2aaa_A	484	Alpha-amylase; glycosidase; 2.10A {Aspergillus nig	95.08
1wzl_A	585	Alpha-amylase II; pullulan, GH-13, alpha-amylase f	93.88
3czg_A	644	Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC;	91.32
4aef_A	645	Neopullulanase (alpha-amylase II); hydrolase, ther	90.74
1mxg_A	435	Alpha amylase; hyperthermostable, family 13 glycos	90.53
1g5a_A	628	Amylosucrase; glycosyltransferase, glycoside hydro	90.36
3bc9_A	599	AMYB, alpha amylase, catalytic region; acarbose, t	90.06
3ucq_A	655	Amylosucrase; thermostability, amylose synthesis,	90.02
1ji1_A	637	Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6	89.34
1ea9_C	583	Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A	88.79
2z1k_A	475	(NEO)pullulanase; hydrolase, structural genomics,	87.97
1j0h_A	588	Neopullulanase; beta-alpha-barrels, hydrolase; 1.9	87.03
3bmv_A	683	Cyclomaltodextrin glucanotransferase; glycosidase,	86.57
4aee_A	696	Alpha amylase, catalytic region; hydrolase, hypert	86.46
1d3c_A	686	Cyclodextrin glycosyltransferase; alpha-amylase, p	85.5
3klk_A	1039	Glucansucrase; native form, open conformation, mul	83.68
2wc7_A	488	Alpha amylase, catalytic region; CD/PUL-hydrolyzin	83.46
1qho_A	686	Alpha-amylase; glycoside hydrolase, starch degrada	80.62

>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A

Probab=99.66  E-value=7.9e-17  Score=137.96  Aligned_cols=90  Identities=26%  Similarity=0.478  Sum_probs=79.6

Q ss_pred             CceeEEecCccceEEecCCCC-CCceeeEEeCCCCCCCeeeccCCCCCCCCccEEEeeeeccCCCCcccchHHhHhhhhh
Q psy9005           4 KIYSILRLSPWATYVTEPPVV-GHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEE   82 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~-~~~f~~~~w~P~~~~~Y~~k~~~p~~p~~LrIYEaHVGmssee~kV~TY~eF~~~VLP   82 (99)
                      +|++++++||||+++++++.. +..|++++|+|+..++|.|++++|++|..+.|||+|||+.+.++++|||+.|++..||
T Consensus       130 ~g~~~~~~dpya~~~~~~~~~~~~~~~~~v~d~~~~~~~~w~~~~~~~~~~~~IYE~hv~~~~~~~~~Gt~~~l~~~~L~  209 (755)
T 3aml_A          130 GGAWVDRIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEPEVSTYREFADNVLP  209 (755)
T ss_dssp             TCCCEEECCTTCSCEEECCSSSSCCEEEEECCCCGGGCCCCCSCCCCCCSSCEEEEEESTTCSSSSSCCCHHHHHHHTHH
T ss_pred             CCcEEecCCcchheEeecccccCcccceEEECCcccccCCCCCcCCCCCCCCEEEEEeeeccccCCCCCCHHHHHHHHHH
Confidence            467889999999999998752 4567899999964457999999998889999999999999999999999999998899


Q ss_pred             hhhccCCcccc
Q psy9005          83 RNLAATVTSSW   93 (99)
Q Consensus        83 rIk~lG~~~~~   93 (99)
                      +||+||||.-|
T Consensus       210 yLk~LGvt~I~  220 (755)
T 3aml_A          210 RIRANNYNTVQ  220 (755)
T ss_dssp             HHHHTTCCEEE
T ss_pred             HHHHcCCCEEE
Confidence            99999999765

>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*

Probab=98.93  E-value=5.8e-10  Score=92.51  Aligned_cols=83  Identities=16%  Similarity=0.093  Sum_probs=66.2

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCC----CCCCCccEEEeeeeccCC---CCcccchHHh
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKP----KKPDNLKIYESHVGICTQ---EQKCASYEDF   76 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p----~~p~~LrIYEaHVGmsse---e~kV~TY~eF   76 (99)
                      +|+..++++||++.+.+++. +   .++++++.   +|.|++...    ..+..+.|||+||+.-+.   +++.|||+.+
T Consensus        85 ~g~~~~~~DPya~~~~~~~~-~---~s~v~~~~---~~~W~~~~~~~~~~~~~~~~iYei~~~~f~~~~~~g~~g~~~~i  157 (617)
T 1m7x_A           85 NGNLRLKSDPYAFEAQMRPE-T---ASLICGLP---EKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYREL  157 (617)
T ss_dssp             TSCEEEECCTTCSSEECTTT-C---EEECCCCC---CCCCCCHHHHHHHSTTSCCEEEEECTTSSCBCTTTCCBCCHHHH
T ss_pred             CCcEEEecCccceeeccCCC-c---eEEEeCCC---CCCCCCccccCCCcccCCcEEEEEEHHHhcCCCCCCCccCHHHH
Confidence            45677899999999988654 3   68899874   599987542    224678999999998443   3568999999


Q ss_pred             HhhhhhhhhccCCcccc
Q psy9005          77 VRVHEERNLAATVTSSW   93 (99)
Q Consensus        77 ~~~VLPrIk~lG~~~~~   93 (99)
                      ++++||+||+||||.-|
T Consensus       158 ~~~ll~yl~~lGv~~i~  174 (617)
T 1m7x_A          158 ADQLVPYAKWMGFTHLE  174 (617)
T ss_dssp             HHHHHHHHHHTTCSEEE
T ss_pred             HHHHHHHHHHcCCCEEE
Confidence            99978999999999765

>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}

Probab=98.82  E-value=1.9e-09  Score=92.43  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=62.6

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCC-----C---CCCCCccEEEeeeeccCCCCcccchHH
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSK-----P---KKPDNLKIYESHVGICTQEQKCASYED   75 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~-----p---~~p~~LrIYEaHVGmssee~kV~TY~e   75 (99)
                      +|+++++++|||+++..++. +   .++++++.    |.|+...     +   +.+.++.|||+|||.-+..   |||++
T Consensus       196 ~g~~~~~~DPya~~~~~~~~-~---~s~v~~~~----~~w~d~~w~~~~~~~~~~~~~~~IYE~h~~s~~~~---G~~~~  264 (722)
T 3k1d_A          196 DGVVTDRADPFAFGTEVPPQ-T---ASRVTSSD----YTWGDDDWMAGRALRNPVNEAMSTYEVHLGSWRPG---LSYRQ  264 (722)
T ss_dssp             TSCEEEECCTTCSSBCCTTC-C---CEECCCCC----CCCSCHHHHHHHTTCCGGGSCCEEEEECTTTSSTT---CCHHH
T ss_pred             CCcEEEeecccceeeccCCC-c---ceEEeCCC----CCCCchHHhhhccccccCCCCeEEEEEehhhccCC---CCHHH
Confidence            46778999999999887654 3   57888744    8887642     2   2346789999999986653   99999


Q ss_pred             hHhhhhhhhhccCCcccc
Q psy9005          76 FVRVHEERNLAATVTSSW   93 (99)
Q Consensus        76 F~~~VLPrIk~lG~~~~~   93 (99)
                      +++.+||+||+||||.-|
T Consensus       265 l~~~l~~yLk~lG~t~I~  282 (722)
T 3k1d_A          265 LARELTDYIVDQGFTHVE  282 (722)
T ss_dssp             HHHHHHHHHHHHTCSEEE
T ss_pred             HHHHHHHHHHHcCCCeEE
Confidence            999977999999999754

>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}

Probab=98.70  E-value=9.3e-09  Score=86.12  Aligned_cols=81  Identities=17%  Similarity=0.142  Sum_probs=62.2

Q ss_pred             EecCccceEEecCCCC-----------------CCceeeEEeCCCCCCCeeeccCCCCC-C-CCccEEEeeeec-cCC--
Q psy9005           9 LRLSPWATYVTEPPVV-----------------GHAYEQRIWNPKPQDKHKWTSSKPKK-P-DNLKIYESHVGI-CTQ--   66 (99)
Q Consensus         9 dRIPawa~~v~q~~~~-----------------~~~f~~~~w~P~~~~~Y~~k~~~p~~-p-~~LrIYEaHVGm-sse--   66 (99)
                      .+++|||+.+..+...                 .....+++++|+    |.|++++++. + ....|||+||+- +..  
T Consensus        91 ~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d~~----~~W~~~~~~~~~~~~~vIYei~v~~F~~~~~  166 (657)
T 2wsk_A           91 LLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDH----YDWEDDAPPRTPWGSTIIYEAHVKGLTYLHP  166 (657)
T ss_dssp             CBCCTTCSCEESCCCCCGGGBCCSSSCCCCCCGGGSCEEECCCCC----CCCTTCCCCCCCGGGCCEEEECHHHHHTTCT
T ss_pred             EEcCcCcceecCCccccccccccccccccccccccccceEEeCCC----CCCCCCCCCCCCchhcEEEEEEcceeeccCC
Confidence            5899999999875210                 122368999986    9999988743 3 678899999974 332  


Q ss_pred             ---CCcccchHHhHhh-hhhhhhccCCcccc
Q psy9005          67 ---EQKCASYEDFVRV-HEERNLAATVTSSW   93 (99)
Q Consensus        67 ---e~kV~TY~eF~~~-VLPrIk~lG~~~~~   93 (99)
                         +...|||+.++++ +||+||+||||.-|
T Consensus       167 ~~~~~~~G~~~gi~~~~~l~yL~~LGvt~i~  197 (657)
T 2wsk_A          167 EIPVEIRGTYKALGHPVMINYLKQLGITALE  197 (657)
T ss_dssp             TSCGGGTTSHHHHTSHHHHHHHHHHTCCEEE
T ss_pred             CCCccCCcCHHHHhcccchHHHHHcCCCEEE
Confidence               2358999999997 89999999999765

>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A

Probab=98.56  E-value=2.6e-08  Score=81.75  Aligned_cols=73  Identities=23%  Similarity=0.271  Sum_probs=56.7

Q ss_pred             EecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCCCCCCccEEEeeeeccCCCCcccchHHhHhhhhhhhhccC
Q psy9005           9 LRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAAT   88 (99)
Q Consensus         9 dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~~p~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG   88 (99)
                      ...+||+++....+. +   .+++++|.    |.|++..+.....+.|||+|||.-++   -|||+..++. ||+|++||
T Consensus        65 ~~~DP~~~~~~~~~~-~---~s~v~d~~----~~w~~~~~~~~~~~~iYe~~~~~f~~---~G~~~~~~~~-l~~l~~lG  132 (558)
T 3vgf_A           65 EIPDPASRYQPEGVH-G---PSQIIQES----KEFNNETFLKKEDLIIYEIHVGTFTP---EGTFEGVIRK-LDYLKDLG  132 (558)
T ss_dssp             EECCTTCSCCTTCTT-S---CEECCCCC----CCCCSSCCCCGGGCCEEEECHHHHSS---SCSHHHHHHT-HHHHHHHT
T ss_pred             cccCcchhhcccCCC-C---cccccCCC----cCcccccCCCccccEEEEEeHHHhCC---CCCHHHHHHH-HHHHHHcC
Confidence            456788876332222 2   57899986    99998884445788999999999775   3799999997 89999999


Q ss_pred             Ccccc
Q psy9005          89 VTSSW   93 (99)
Q Consensus        89 ~~~~~   93 (99)
                      ||.-|
T Consensus       133 ~~~v~  137 (558)
T 3vgf_A          133 ITAIE  137 (558)
T ss_dssp             CCEEE
T ss_pred             CcEEE
Confidence            99755

>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A

Probab=98.56  E-value=3.3e-08  Score=82.53  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=54.5

Q ss_pred             EecCccceEEecCCCCCC--ceeeEEeCCCCCCCeeec-cCCCC--CCCCccEEEeeee------ccCCCCcccchHHhH
Q psy9005           9 LRLSPWATYVTEPPVVGH--AYEQRIWNPKPQDKHKWT-SSKPK--KPDNLKIYESHVG------ICTQEQKCASYEDFV   77 (99)
Q Consensus         9 dRIPawa~~v~q~~~~~~--~f~~~~w~P~~~~~Y~~k-~~~p~--~p~~LrIYEaHVG------mssee~kV~TY~eF~   77 (99)
                      ..++|||+.++.+...+.  ..+...|+|.   .|.|. +.+|.  ++..+.|||+|||      .+.++...|||..|+
T Consensus       206 ~~~DPya~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~vIYE~HVr~ft~~~~~~~~~~~Gtf~g~~  282 (884)
T 4aio_A          206 LAGDPYARSLSANGARTWLVDINNETLKPA---SWDELADEKPKLDSFSDITIYELHIRDFSAHDGTVDSDSRGGFRAFA  282 (884)
T ss_dssp             EECCTTCSEESGGGSSEECCCTTCGGGSCT---TGGGGGGTSCCCSCGGGCCEEEECHHHHHTTCTTSCTTTTTSGGGGS
T ss_pred             cccCCCeeeeccCCCCeeEecCccCccCcc---cccccccccCCCCCcccCEEEEEEcCccccCCCCCCccccCcccccc
Confidence            346899999887543111  1122335554   35553 34443  3478999999998      345667789999996


Q ss_pred             hh------hhhhhhccCCcccc
Q psy9005          78 RV------HEERNLAATVTSSW   93 (99)
Q Consensus        78 ~~------VLPrIk~lG~~~~~   93 (99)
                      +.      .||+||+||||.-|
T Consensus       283 ~~~~~~ie~L~yLk~LGVtave  304 (884)
T 4aio_A          283 YQASAGMEHLRKLSDAGLTHVH  304 (884)
T ss_dssp             CTTSHHHHHHHHHHHHTCCEEE
T ss_pred             cchhhHHHHhHHHHHcCCCEEE
Confidence            43      39999999999755

>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1

Probab=98.55  E-value=3.2e-08  Score=84.21  Aligned_cols=80  Identities=24%  Similarity=0.231  Sum_probs=60.3

Q ss_pred             EecCccceEEecCCCCC-----Cc----------------eeeEEeCCCCCCCeeeccCCCCCC-CCccEEEeeeec-cC
Q psy9005           9 LRLSPWATYVTEPPVVG-----HA----------------YEQRIWNPKPQDKHKWTSSKPKKP-DNLKIYESHVGI-CT   65 (99)
Q Consensus         9 dRIPawa~~v~q~~~~~-----~~----------------f~~~~w~P~~~~~Y~~k~~~p~~p-~~LrIYEaHVGm-ss   65 (99)
                      ..++|||+.+..+++..     ..                ..+++++|.    |.|++.+|..+ ....|||+||+- +.
T Consensus       116 ~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~s~v~~~~----~~W~d~~~~~~~~~~vIYe~hv~~f~~  191 (750)
T 1bf2_A          116 LLLDPYAQEVSQDPLNPSNQNGNVFASGASYRTTDSGIYAPKGVVLVPS----TQSTGTKPTRAQKDDVIYEVHVRGFTE  191 (750)
T ss_dssp             CBCCTTCSCBSCCSSCSSCCCGGGGBCSTTTTTCCCTTTSCCEECCCCC----CCCCCCCCCCCGGGCCEEEECHHHHHT
T ss_pred             eecCcCcceeccCCCCcccccccccccccccccccccccccceEEeCCC----CCCCcCCCCCCccccEEEEEEhhHhhC
Confidence            57899999998654311     11                248899875    99996555444 778999999984 22


Q ss_pred             -----CCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          66 -----QEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        66 -----ee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                           ++...|||+.++++ ||+||+||||.-|
T Consensus       192 ~~~~~~~~~~Gt~~gl~~~-l~yLk~LGvt~V~  223 (750)
T 1bf2_A          192 QDTSIPAQYRGTYYGAGLK-ASYLASLGVTAVE  223 (750)
T ss_dssp             TCTTSCGGGTTSHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cCCCCCccCCcCHHHHHHH-HHHHHHcCCCEEE
Confidence                 12357999999999 9999999999765

>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}

Probab=98.51  E-value=4.5e-08  Score=81.90  Aligned_cols=74  Identities=16%  Similarity=0.164  Sum_probs=59.2

Q ss_pred             EecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCC-CC-CCccEEEeeeeccCCCCcccchHHhHhhhhhhhhc
Q psy9005           9 LRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK-KP-DNLKIYESHVGICTQEQKCASYEDFVRVHEERNLA   86 (99)
Q Consensus         9 dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~-~p-~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~   86 (99)
                      ..++||++.+..++. +   .+++++|.   .|.|+++.++ +| ..+.|||+|||.-++   -|||+.+++. ||+||+
T Consensus        97 ~~~DP~a~~~~~~~~-~---~s~v~d~~---~~~w~~~~~~~~~~~~~~iYe~~v~~f~~---~G~~~~~~~~-L~yl~~  165 (618)
T 3m07_A           97 VVPDPASRAQKTDVN-G---PSYVVDPG---SYTWRNTGWKGSRWEQAVVYEMHTGTFTP---EGTFRAAIAK-LPYLAE  165 (618)
T ss_dssp             EECCTTCSCBSSSTT-S---CEECCCTT---SSCCSCTTCCCCCGGGCCEEEECHHHHSS---SCSHHHHHTT-HHHHHH
T ss_pred             EeccccceeeecCCC-C---CEEEEcCc---cCCCCCccccCCChhhCeEEEEehhhcCC---CCCHHHHHHH-HHHHHH
Confidence            345799998766544 4   57899985   5999998774 33 678899999999775   4799999997 899999


Q ss_pred             cCCcccc
Q psy9005          87 ATVTSSW   93 (99)
Q Consensus        87 lG~~~~~   93 (99)
                      ||||.-|
T Consensus       166 lGv~~v~  172 (618)
T 3m07_A          166 LGVTVIE  172 (618)
T ss_dssp             HTCCEEE
T ss_pred             cCCCEEE
Confidence            9999754

>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*

Probab=98.46  E-value=8.4e-08  Score=79.71  Aligned_cols=75  Identities=20%  Similarity=0.257  Sum_probs=60.2

Q ss_pred             EEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCC-CC-CCccEEEeeeeccCCCCcccchHHhHhhhhhhhh
Q psy9005           8 ILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK-KP-DNLKIYESHVGICTQEQKCASYEDFVRVHEERNL   85 (99)
Q Consensus         8 ~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~-~p-~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk   85 (99)
                      ..+++||++.+.+... +   .+++++|.   .|.|+++.++ +| ....|||+||+.-+   ..|+|+.+++. |++||
T Consensus        86 ~~~~DPya~~~~~~~~-~---~s~v~d~~---~~~w~~~~w~~~~~~~~viYei~~~~f~---~~G~~~gi~~~-L~yl~  154 (602)
T 2bhu_A           86 VPTPDPYARFLPDGVH-G---EAEVVDFG---TFDWTDADWHGIKLADCVFYEVHVGTFT---PEGTYRAAAEK-LPYLK  154 (602)
T ss_dssp             EEECCTTCSCCTTCTT-S---CEECCCTT---SSCCCCTTCCCCCGGGCCEEEECHHHHS---SSCSHHHHHHT-HHHHH
T ss_pred             eEecCCCccccCCCCC-C---CEEEeccc---ccCCCccccccCCcccceEEEEeecccc---cCCCHHHHHHH-HHHHH
Confidence            4678899998765443 3   47889985   5999998763 23 78899999999866   36999999997 89999


Q ss_pred             ccCCcccc
Q psy9005          86 AATVTSSW   93 (99)
Q Consensus        86 ~lG~~~~~   93 (99)
                      +||||.-|
T Consensus       155 ~lGv~~I~  162 (602)
T 2bhu_A          155 ELGVTAIQ  162 (602)
T ss_dssp             HHTCCEEE
T ss_pred             HcCCCEEE
Confidence            99999766

>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A

Probab=98.38  E-value=2e-07  Score=79.00  Aligned_cols=81  Identities=21%  Similarity=0.274  Sum_probs=59.9

Q ss_pred             EecCccceEEecCCC------------------------CCCceeeEEeCCCCCCCeeeccC---CC-CCC-CCccEEEe
Q psy9005           9 LRLSPWATYVTEPPV------------------------VGHAYEQRIWNPKPQDKHKWTSS---KP-KKP-DNLKIYES   59 (99)
Q Consensus         9 dRIPawa~~v~q~~~------------------------~~~~f~~~~w~P~~~~~Y~~k~~---~p-~~p-~~LrIYEa   59 (99)
                      ..++|||+.+..+..                        ......+++++|.    |.|+++   ++ ..+ ....|||+
T Consensus       104 ~~~DPya~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~s~v~d~~----~~W~~~~~~~~~~~~~~~~vIYei  179 (718)
T 2vr5_A          104 VLIDPYAKAINGSVIWNDAVFGYKIGDQNQDLTYDERDSGEYVPKSVVINPY----FEWDDEDFIKGKKVPLKDTVIYEV  179 (718)
T ss_dssp             CBCCTTCSCBCSCCCCCGGGSSSCSSCTTTTTSCCCCCCTTTSCCEECCCCC----CCCTTGGGGSSSCCCTTSCCEEEE
T ss_pred             eEcCcCccccccCccccccccccccCCcccccccccccccccccceEEecCC----cCCCccccccCCCCChhHCEEEEE
Confidence            458999999884311                        0112368899875    999987   44 333 77899999


Q ss_pred             eeec-cC-----CCCcccchHHhHhh-hhhhhhccCCcccc
Q psy9005          60 HVGI-CT-----QEQKCASYEDFVRV-HEERNLAATVTSSW   93 (99)
Q Consensus        60 HVGm-ss-----ee~kV~TY~eF~~~-VLPrIk~lG~~~~~   93 (99)
                      ||+- +.     ++...|||+.++++ +||+||+||||.-|
T Consensus       180 hv~~f~~~~~~~~~~~~Gt~~gi~~~~~l~yLk~LGvt~I~  220 (718)
T 2vr5_A          180 HVKGFTKLRLDLPENIRGTYEGLASEQMISYLKDLGITTVE  220 (718)
T ss_dssp             CTTTTTTTCTTSCTTSTTSHHHHTSHHHHHHHHHHTCCEEE
T ss_pred             EcchhhcCCCCCCcccCcCHHHHhcchhhHHHHHcCCCeEE
Confidence            9976 22     23458999999996 89999999999765

>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*

Probab=98.34  E-value=1.6e-07  Score=79.22  Aligned_cols=87  Identities=18%  Similarity=0.230  Sum_probs=57.2

Q ss_pred             ceeEEecCccceEEecC--------CCCCCceeeEEeCCCCC--CCeeeccCCC-CCCCCccEEEeeeeccCCC------
Q psy9005           5 IYSILRLSPWATYVTEP--------PVVGHAYEQRIWNPKPQ--DKHKWTSSKP-KKPDNLKIYESHVGICTQE------   67 (99)
Q Consensus         5 ~~~~dRIPawa~~v~q~--------~~~~~~f~~~~w~P~~~--~~Y~~k~~~p-~~p~~LrIYEaHVGmssee------   67 (99)
                      +.....++|||+.+...        +. .....+++++|..-  +.+.|....+ .....+.|||+||+.-+.+      
T Consensus        93 ~~~~~~~DPya~~~~~~~~~~~~~~~~-~~~~~~~vvd~~~~~~~~~~~~~~~~~~~~~~~viYE~hv~~f~~~~~~~~~  171 (714)
T 2ya0_A           93 GKTVLALDPYAKSLAAWNSDDSKIDDA-HKVAKAAFVDPAKLGPQDLTYGKIHNFKTREDAVIYEAHVRDFTSDPAIAKD  171 (714)
T ss_dssp             TEEEEECCTTCSEECCCBGGGTTSCGG-GSSCCEECCCGGGSSCTTCCCCCCTTCSSGGGCCEEEECHHHHHCCGGGTTT
T ss_pred             CceEEecCCceeeeccCchhccccCcc-ccCCcEEEEcccccCcccccccccCCCCCccccEEEEEEehhhccCCCCccc
Confidence            34456789999987531        11 22346788887521  1234433222 2347788999999974333      


Q ss_pred             --CcccchHHhHhhhhhhhhccCCcccc
Q psy9005          68 --QKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        68 --~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                        ...|||+.+++. ||+||+||||.-|
T Consensus       172 ~~~~~Gt~~gi~~~-L~yLk~LGvt~I~  198 (714)
T 2ya0_A          172 LTKPFGTFEAFIEK-LDYLKDLGVTHIQ  198 (714)
T ss_dssp             CSSCTTSHHHHHTT-HHHHHHHTCSEEE
T ss_pred             cccCCcCHHHHHHH-hHHHHHcCCCEEE
Confidence              235999999998 8999999999765

>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*

Probab=98.34  E-value=2.3e-07  Score=78.30  Aligned_cols=84  Identities=14%  Similarity=0.039  Sum_probs=59.7

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCCCCCCCCccEEEeeeecc--CCCCc---ccchHHhHh
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGIC--TQEQK---CASYEDFVR   78 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~p~~p~~LrIYEaHVGms--see~k---V~TY~eF~~   78 (99)
                      +|.+..+++||++.+..+..     .+++.+|..-++..| .+.+..+....|||+||+--  ++...   .|+|..+++
T Consensus       171 ~g~~~~~~DPya~~~~~~~~-----~s~v~d~~~~~~~~w-~~~~~~~~~~viYei~v~~F~~~~~~g~~~~G~~~g~~e  244 (718)
T 2e8y_A          171 NSEWMETVDQYAKAVTVNGE-----KGVVLRPDQMKWTAP-LKPFSHPVDAVIYETHLRDFSIHENSGMINKGKYLALTE  244 (718)
T ss_dssp             TTEEEEECCTTCSSBCGGGC-----SEECCCCCCCCCCCC-CCCCSCGGGCCEEEECHHHHHHSTTSCCSSTTSGGGGGC
T ss_pred             CCeEEEecCCcccccccCCC-----cceEEcccccCCccc-CCCCCChhhcEEEEEehHHhcCCCCCCCCCCCCeecccc
Confidence            35677899999999876432     466777764344556 22223457789999999972  33333   499999987


Q ss_pred             h----------hhhhhhccCCcccc
Q psy9005          79 V----------HEERNLAATVTSSW   93 (99)
Q Consensus        79 ~----------VLPrIk~lG~~~~~   93 (99)
                      .          .||+||+||||.-|
T Consensus       245 ~~~~~l~Gi~~~LdyLk~LGvtaI~  269 (718)
T 2e8y_A          245 TDTQTANGSSSGLAYVKELGVTHVE  269 (718)
T ss_dssp             TTCBCTTSCBCHHHHHHHHTCSEEE
T ss_pred             ccccccccchhhhHHHHHcCCCEEE
Confidence            3          69999999999765

>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}

Probab=98.28  E-value=1.9e-07  Score=81.38  Aligned_cols=85  Identities=18%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             CceeEEecCccceEEecCCCCCCceeeEEeCCCCCCCeeeccCC-CC--CCCCccEEEeeeec-c-CCCCcc---cchHH
Q psy9005           4 KIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSK-PK--KPDNLKIYESHVGI-C-TQEQKC---ASYED   75 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~~~Y~~k~~~-p~--~p~~LrIYEaHVGm-s-see~kV---~TY~e   75 (99)
                      +|+...+++||++.+..+..     .+++.++...+++.|+..+ |.  .+....|||+||+- + ++...+   |||..
T Consensus       385 ~g~~~~~~DPya~~~~~~~~-----~s~v~d~~~~~~~~W~~~~~p~~~~~~~~vIYEihv~~F~~~~~~g~~~~Gt~~g  459 (921)
T 2wan_A          385 NGTTQTAVDPYARAISVNAT-----RGMIVDLKATDPAGWQGDHEQTPANPVDEVIYEAHVRDFSIDANSGMKNKGKYLA  459 (921)
T ss_dssp             SSCEEEECCTTCSSBSGGGS-----SEECCCGGGGSCTTGGGCCCCCCSSGGGCCEEEECHHHHHCSTTSCCSSTTSGGG
T ss_pred             CCeEEEecCCcceeeccCCC-----ceEEEcccccCccccccccCCCCCCchhcEEEEEEcCcccCCCCCCCCCCCCeeh
Confidence            35667889999999876432     4566666433457887544 32  35778999999996 3 333334   99999


Q ss_pred             hHhh----------hhhhhhccCCcccc
Q psy9005          76 FVRV----------HEERNLAATVTSSW   93 (99)
Q Consensus        76 F~~~----------VLPrIk~lG~~~~~   93 (99)
                      +++.          .||+||+||||.-|
T Consensus       460 ~~e~~~~~l~Gi~~~LdyLk~LGvtaI~  487 (921)
T 2wan_A          460 FTEHGTKGPDHVKTGIDSLKELGITTVQ  487 (921)
T ss_dssp             GGCCSCBCGGGCBCHHHHHHHHTCCEEE
T ss_pred             eeccccccccccchhhHHHHHcCCCEEE
Confidence            9884          59999999999765

>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}

Probab=98.16  E-value=5e-07  Score=79.66  Aligned_cols=88  Identities=18%  Similarity=0.215  Sum_probs=56.8

Q ss_pred             ceeEEecCccceEEecC-CC------CCCceeeEEeCCCCC--CCeeeccCCC-CCCCCccEEEeeeeccCCCC------
Q psy9005           5 IYSILRLSPWATYVTEP-PV------VGHAYEQRIWNPKPQ--DKHKWTSSKP-KKPDNLKIYESHVGICTQEQ------   68 (99)
Q Consensus         5 ~~~~dRIPawa~~v~q~-~~------~~~~f~~~~w~P~~~--~~Y~~k~~~p-~~p~~LrIYEaHVGmssee~------   68 (99)
                      +.....++|||+.+... ..      ......+++++|..-  +.+.|....+ .....+.|||+||+.-+.++      
T Consensus       400 ~~~~~~~DPYa~~~~~~~~~~~~~~~~~~~~~s~vvd~~~~~~~~~~~~~~~~~~~~~~~vIYE~hv~~ft~~~~~~~~~  479 (1014)
T 2ya1_A          400 GKTVLALDPYAKSLAAWNSDDSKIDDAHKVAKAAFVDPAKLGPQDLTYGKIHNFKTREDAVIYEAHVRDFTSDPAIAKDL  479 (1014)
T ss_dssp             TEEEEECCTTCSSBCCCBGGGTTSCGGGSSCCEECCCGGGSSCTTCCCCCCTTCSSGGGCCEEEECHHHHHCCGGGTTTC
T ss_pred             CeEEEecCccceeccccccccccccccCCcccEEEECchhcCCcccccccCccccCccccEEEEEecCCCCCCCCccccc
Confidence            34456788999876531 00      022346788887521  1244432222 23477899999999743332      


Q ss_pred             --cccchHHhHhhhhhhhhccCCcccc
Q psy9005          69 --KCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        69 --kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                        ..|||+.+++. ||+||+||||.-|
T Consensus       480 ~~~~Gt~~gl~~~-LdyLk~LGvtaV~  505 (1014)
T 2ya1_A          480 TKPFGTFEAFIEK-LDYLKDLGVTHIQ  505 (1014)
T ss_dssp             SSCTTSHHHHHTT-HHHHHHHTCSEEE
T ss_pred             cCCCcCHHHHHHH-hHHHHHcCCCeEE
Confidence              35999999998 8999999999765

>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*

Probab=98.13  E-value=9.1e-07  Score=77.33  Aligned_cols=86  Identities=21%  Similarity=0.176  Sum_probs=58.3

Q ss_pred             CceeEEecCccceEEec-CCC-C---CCceeeEEeCCCCCCCeeeccC----CC--CCCCCccEEEeeeeccCCCC----
Q psy9005           4 KIYSILRLSPWATYVTE-PPV-V---GHAYEQRIWNPKPQDKHKWTSS----KP--KKPDNLKIYESHVGICTQEQ----   68 (99)
Q Consensus         4 ~~~~~dRIPawa~~v~q-~~~-~---~~~f~~~~w~P~~~~~Y~~k~~----~p--~~p~~LrIYEaHVGmssee~----   68 (99)
                      ++.....++|||+.+.. ++. .   ...-.+++.+|.   .|.|...    .|  .......|||+||+--+..+    
T Consensus       210 ~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~s~vvd~~---~~~~~~~~~~~~p~~~~~~~~vIYElhvr~ft~~~~~~~  286 (877)
T 3faw_A          210 GKDKVKILDPYAKSLAEWDSNTVNDDIKTAKAAFVNPS---QLGPQNLSFAKIANFKGRQDAVIYEAHVRDFTSDQSLDG  286 (877)
T ss_dssp             TTEEEEECCTTCSCBCCCBGGGCCSSCCSCCEECCCGG---GSSCTTCCCCCCTTCCSGGGCEEEEECTTGGGCCGGGTT
T ss_pred             CCceeEecCccceeccccCcccccccccCCceEEeccc---ccCCCccccccCCCCCCccccEEEEEEchHhcCCCCCCc
Confidence            35567789999998864 111 0   012357888875   3555432    22  22366889999999744332    


Q ss_pred             ----cccchHHhHhhhhhhhhccCCcccc
Q psy9005          69 ----KCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        69 ----kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                          +.|||+.+++. ||+||+||||.-|
T Consensus       287 ~~~~~~Gt~~gl~~~-L~yLk~LGvtaV~  314 (877)
T 3faw_A          287 KLKNQLGTFAAFSEK-LDYLQKLGVTHIQ  314 (877)
T ss_dssp             TCSSCTTSHHHHGGG-HHHHHHHTCSEEE
T ss_pred             cccCCCCCHHHHHHH-HHHHHHcCCCEEE
Confidence                35999999998 8999999999765

>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*

Probab=97.97  E-value=1.8e-06  Score=77.05  Aligned_cols=82  Identities=16%  Similarity=0.177  Sum_probs=56.8

Q ss_pred             eEEecCccceEEecCCCCCCceeeEEeCCCCC--CCeeeccCCCC---CC-CC---ccEEEeeeeccC--CC----Cccc
Q psy9005           7 SILRLSPWATYVTEPPVVGHAYEQRIWNPKPQ--DKHKWTSSKPK---KP-DN---LKIYESHVGICT--QE----QKCA   71 (99)
Q Consensus         7 ~~dRIPawa~~v~q~~~~~~~f~~~~w~P~~~--~~Y~~k~~~p~---~p-~~---LrIYEaHVGmss--ee----~kV~   71 (99)
                      ....++||++.+..+..     -++++++...  +++.|...+++   .| ..   +.|||+||+.-+  ..    ..-|
T Consensus       373 ~~~~~DPYa~~~~~~~~-----~s~v~d~~~~~~~p~~W~~~~~p~~~~~~~~~~~~vIYE~hvr~ft~~~~~~~~~~~G  447 (1083)
T 2fhf_A          373 QYEVTDPYAHSLSTNSE-----YSQVVDLNDSALKPEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRG  447 (1083)
T ss_dssp             EEEECCTTCSCBCGGGS-----SEECBCTTCGGGSCTTGGGCCCSSCCSSHHHHHTCEEEEECHHHHHTTCTTSCGGGTT
T ss_pred             cceecCCccceeccCCC-----cceEecccccccCCcccccccCcccccccccccccEEEEEecchhcCCCCCCCcCCCC
Confidence            46789999999887432     3466776421  35788877664   12 23   499999999832  22    2349


Q ss_pred             chHHhHhh------hhhhhhccCCcccc
Q psy9005          72 SYEDFVRV------HEERNLAATVTSSW   93 (99)
Q Consensus        72 TY~eF~~~------VLPrIk~lG~~~~~   93 (99)
                      ||.-|++.      -|++|++||||.-|
T Consensus       448 t~~g~~e~~~~~i~~L~~L~~lGvt~i~  475 (1083)
T 2fhf_A          448 KYLALTAQESNMVQHLKQLSASGVTHIE  475 (1083)
T ss_dssp             SGGGGGCTTSHHHHHHHHHHHHTCCEEE
T ss_pred             ChhhhhhhhhhhHHHHHHHHhcCCCEEE
Confidence            99999985      58888888999755

>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*

Probab=96.77  E-value=0.00055  Score=53.71  Aligned_cols=39  Identities=8%  Similarity=0.050  Sum_probs=33.4

Q ss_pred             ccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          54 LKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        54 LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      +.|||.||+-  .+....+|+|+..+++ ||+||+||||.-|
T Consensus         1 ~viYei~~~~F~~~~~~g~Gd~~gi~~~-LdyL~~LGv~~I~   41 (441)
T 1lwj_A            1 MIGYQIYVRSFRDGNLDGVGDFRGLKNA-VSYLKELGIDFVW   41 (441)
T ss_dssp             CCEEEECHHHHCCSSSSSSCCHHHHHHT-HHHHHHTTCCEEE
T ss_pred             CeEEEEehHHhcCCCCCCccCHHHHHHh-hHHHHHcCCCEEE
Confidence            4699999998  3445568999999998 9999999999766

>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}

Probab=96.75  E-value=0.00058  Score=53.84  Aligned_cols=40  Identities=8%  Similarity=0.114  Sum_probs=34.2

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||.||+-  .+....+|+|+-.+++ ||+||+||||.-|
T Consensus         9 ~~viYei~~~~F~d~~~dg~Gdl~Gi~~k-LdYLk~LGvt~I~   50 (549)
T 4aie_A            9 NAVVYQVYPKSFQDSNGDGIGDLQGIISR-LDYLEKLGIDAIW   50 (549)
T ss_dssp             SCCEEEECGGGTCCSSSSSSCCHHHHHTT-HHHHHHHTCSEEE
T ss_pred             cCeEEEEEcchhcCCCCCCCcCHHHHHHh-hHHHHHCCCCEEE
Confidence            34699999997  4556678999999999 9999999999766

>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*

Probab=96.62  E-value=0.00047  Score=57.14  Aligned_cols=78  Identities=4%  Similarity=-0.030  Sum_probs=50.0

Q ss_pred             EecCccceEEecCCCCCCc-e-eeEEeCCCCCCCeeeccCCCC--CCCCccEEEeeeeccCC-----CC-----------
Q psy9005           9 LRLSPWATYVTEPPVVGHA-Y-EQRIWNPKPQDKHKWTSSKPK--KPDNLKIYESHVGICTQ-----EQ-----------   68 (99)
Q Consensus         9 dRIPawa~~v~q~~~~~~~-f-~~~~w~P~~~~~Y~~k~~~p~--~p~~LrIYEaHVGmsse-----e~-----------   68 (99)
                      .+++|||+.+..++.  .. + +...|..|    ..|...++.  ......|||+||+.-+.     .+           
T Consensus        41 ~~~DPya~~~~~~~~--~~~~~~~~~~~~p----~~w~~~~~~~~~~~~~~iYe~~~~~f~~~~~~~~~~~~~~~~~~~~  114 (637)
T 1gjw_A           41 CFVDPYELGAEITDW--ILNQSREWDYSQP----LSFLKGEKTPDWIKRSVVYGSLPRTTAAYNHKGSGYYEENDVLGFR  114 (637)
T ss_dssp             EEECHHHHHHHHHHH--HHTTCCSSCTTSC----HHHHHTCCSGGGGGGCCEEEECHHHHTCCCTTSSSCCCSBCTTSCB
T ss_pred             EECCccccceecCce--eccCCCcccccCc----hhhhhccCccCchhhCeEEEEeeccccCCCCCCCCccccccccchh
Confidence            589999999876432  00 0 11234433    566544432  23678899999965211     11           


Q ss_pred             cccchHHhHhhhhhhhhccCCcccc
Q psy9005          69 KCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        69 kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ..|||+..++. |++||+||||.-|
T Consensus       115 ~~g~~~g~~~~-l~~l~~lG~~~v~  138 (637)
T 1gjw_A          115 EAGTFFKMMLL-LPFVKSLGADAIY  138 (637)
T ss_dssp             CSCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             ccccHHHHHHH-HHHHHHcCCCEEE
Confidence            34899998775 9999999999755

>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A

Probab=96.48  E-value=0.0012  Score=52.34  Aligned_cols=49  Identities=10%  Similarity=0.107  Sum_probs=38.2

Q ss_pred             eccCCCCCC--CCccEEEee-eeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          43 WTSSKPKKP--DNLKIYESH-VGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        43 ~k~~~p~~p--~~LrIYEaH-VGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |..+.|++.  +...|||.| ++--+ ...+|+++-.++. |++||+||||.-|
T Consensus         3 ~~~~~~~~~ww~~~viYqi~~~~sf~-gdg~Gdl~gi~~~-Ldyl~~LGv~~i~   54 (424)
T 2dh2_A            3 WGSELPAQKWWHTGALYRIGDLQAFQ-GHGAGNLAGLKGR-LDYLSSLKVKGLV   54 (424)
T ss_dssp             -CCSCCCCCGGGSSCEEEECCHHHHH-CTTCCSHHHHHTT-HHHHHHTTCSEEE
T ss_pred             CCCCCCcccccccCeEEEEcCccccC-CCCCCCHHHHHHH-HHHHHHcCCCEEE
Confidence            555555543  566799999 88744 4578999999998 9999999999866

>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*

Probab=96.47  E-value=0.0011  Score=53.91  Aligned_cols=41  Identities=7%  Similarity=0.124  Sum_probs=34.9

Q ss_pred             CCccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ....|||.|++-  .+....+|+|+.++++ |++||+||||.-|
T Consensus         8 ~~~viYqi~~~~F~~~~~dg~Gdl~gi~~~-Ldyl~~LGv~~I~   50 (557)
T 1zja_A            8 KSAVFYQVYPRSFKDTNGDGIGDFKGLTEK-LDYLKGLGIDAIW   50 (557)
T ss_dssp             HHCCEEEECGGGTCCSSSSSSCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             hcCcEEEEEchHhcCCCCCCccCHHHHHHH-HHHHHHcCCCEEE
Confidence            456799999998  3445679999999998 8999999999766

>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*

Probab=96.43  E-value=0.0021  Score=54.40  Aligned_cols=42  Identities=7%  Similarity=-0.011  Sum_probs=36.5

Q ss_pred             CCCccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          51 PDNLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        51 p~~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |....|||.|++.  .+....+|+++..++. ||+|++||||.-|
T Consensus        35 ~~~~viY~i~~~~f~~~~~~~~G~~~g~~~~-l~yl~~lGv~~i~   78 (669)
T 3k8k_A           35 KRADISYQLLLYSFADSDGDGYGDLNGVTQK-LDYLNQLGVKALW   78 (669)
T ss_dssp             CCSCCEEEECTTTSCCSSSSSSCCHHHHHTT-HHHHHTTTCSEEE
T ss_pred             CcCcEEEEEEhHHhcCCCCCCCcCHHHHHHH-HHHHHHcCCCEEE
Confidence            3568899999998  4566779999999998 9999999999766

>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*

Probab=95.89  E-value=0.0033  Score=51.03  Aligned_cols=41  Identities=10%  Similarity=0.087  Sum_probs=34.7

Q ss_pred             CCccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ....|||.|++-  .+....+|+|+.++++ |++||+||||.-|
T Consensus         7 ~~~viYqi~~~~F~~~~~dg~Gdl~gi~~~-Ldyl~~LGv~~I~   49 (543)
T 2zic_A            7 HKATVYQIYPKSFMDTNGDGIGDLKGITSK-LDYLQKLGVMAIW   49 (543)
T ss_dssp             GGCCEEEECGGGTCCSSSSSSCCHHHHHHT-HHHHHHHTCSEEE
T ss_pred             hhCeEEEEEcHHhcCCCCCCccCHHHHHHH-HHHHHHcCCCEEE
Confidence            456799999998  3445679999999998 8999999999866

>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1

Probab=95.74  E-value=0.006  Score=48.38  Aligned_cols=41  Identities=12%  Similarity=0.140  Sum_probs=34.4

Q ss_pred             CCccEEEeeeec--cCCCCcccchHHhHhhhhhhh--------hccCCcccc
Q psy9005          52 DNLKIYESHVGI--CTQEQKCASYEDFVRVHEERN--------LAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrI--------k~lG~~~~~   93 (99)
                      +...|||.||+-  .+....+|+++-.+++ |++|        |+||||.-|
T Consensus         3 ~~~viYqi~~~~F~~~~~~g~Gdl~gi~~~-LdyL~~~~~~~~~~LGv~~I~   53 (488)
T 1wza_A            3 KHGTYYEIFVRSFYDSDGDGIGDLKGIIEK-LDYLNDGDPETIADLGVNGIW   53 (488)
T ss_dssp             CCCCEEEECGGGSCCSSSSSCCCHHHHHHT-HHHHCCSCTTCCSSCCCSEEE
T ss_pred             CCcEEEEEEChhhcCCCCCCcCCHHHHHHh-hhhhhccccchhhhcCccEEE
Confidence            345799999998  3445568999999998 9999        999999766

>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1

Probab=95.66  E-value=0.0049  Score=50.29  Aligned_cols=41  Identities=7%  Similarity=0.114  Sum_probs=34.6

Q ss_pred             CCccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ....|||.|++-  .+....+|+++.+++. |++||+||||.-|
T Consensus        21 ~~~viYqi~~~~F~d~~~dg~Gdl~gi~~~-LdyL~~LGv~~I~   63 (570)
T 1m53_A           21 KEAVFYQIYPRSFKDTNDDGIGDIRGIIEK-LDYLKSLGIDAIW   63 (570)
T ss_dssp             HHCCEEEECGGGTCCSSSSSSCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             hhCcEEEEechhhccCCCCCccCHHHHHHH-HHHHHHcCCCEEE
Confidence            356799999998  3445679999999998 8999999999766

>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*

Probab=95.63  E-value=0.0053  Score=50.57  Aligned_cols=41  Identities=7%  Similarity=0.110  Sum_probs=34.8

Q ss_pred             CCccEEEeeeecc--CCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGIC--TQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGms--see~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ....|||+|++-=  +....+|+|+..+++ |++||+||||.-|
T Consensus        16 ~~~viYqi~~~~F~d~~~dg~Gdl~gi~~~-Ldyl~~LGv~~i~   58 (589)
T 3aj7_A           16 KEATFYQIYPASFKDSNDDGWGDMKGIASK-LEYIKELGADAIW   58 (589)
T ss_dssp             HHCCEEEECGGGSCCSSSSSSCCHHHHHHT-HHHHHHHTCSEEE
T ss_pred             hhCeEEEEEhHHhcCCCCCCccCHHHHHHH-HHHHHHcCCCEEE
Confidence            4567999999983  445679999999998 9999999999866

>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}

Probab=95.59  E-value=0.0033  Score=49.29  Aligned_cols=38  Identities=16%  Similarity=0.196  Sum_probs=31.9

Q ss_pred             CCccEEEeeeeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      +...|||+|++--+..   |+|+..+++ ||+|++||||.-|
T Consensus        11 ~~~viYei~~~~f~~~---G~~~~i~~~-l~yl~~lG~~~i~   48 (449)
T 3dhu_A           11 RNEMIYSVFVRNYSEA---GNFAGVTAD-LQRIKDLGTDILW   48 (449)
T ss_dssp             GGCCEEEECHHHHSSS---CSHHHHHTT-HHHHHHHTCSEEE
T ss_pred             hcCEEEEEEhhhhCCC---CCHHHHHHh-HHHHHHcCCCEEE
Confidence            4567999999875432   899999998 8999999999766

>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A

Probab=95.54  E-value=0.0069  Score=47.81  Aligned_cols=39  Identities=13%  Similarity=0.163  Sum_probs=30.6

Q ss_pred             ccEEEeeeec--cCCCCcc------------cchHHhHhhhhhhhhccCCcccc
Q psy9005          54 LKIYESHVGI--CTQEQKC------------ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        54 LrIYEaHVGm--ssee~kV------------~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ..|||.|+.-  .+....+            |+|+..+++ ||+||+||||.-|
T Consensus         9 ~~iYqi~~~~F~~~~~~~~~~~~~~~~~~~gG~~~gi~~~-LdyL~~lGvt~I~   61 (478)
T 2guy_A            9 QSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDK-LDYIQGMGFTAIW   61 (478)
T ss_dssp             CCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHT-HHHHHTTTCCEEE
T ss_pred             CcEEEEecccccCCCCCCCCCCCCcccccCCCCHHHHHHH-HHHHHhcCCCEEE
Confidence            4599999987  2222223            899999998 8999999999866

>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}

Probab=95.43  E-value=0.0067  Score=49.25  Aligned_cols=40  Identities=8%  Similarity=0.041  Sum_probs=34.0

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||+|+.-  .+....+|+++..++. ||+||+||||.-|
T Consensus         8 ~~viYqi~~~~F~d~~~dg~Gd~~gi~~~-ldyl~~lGv~~i~   49 (555)
T 2ze0_A            8 EGVAYQIYPRSFMDANGDGIGDLRGIIEK-LDYLVELGVDIVW   49 (555)
T ss_dssp             HCCEEEECGGGTCCSSSSSSCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cCcEEEEEchHhcCCCCCCcCCHHHHHHH-HHHHHHcCCCEEE
Confidence            45799999997  3445569999999998 9999999999866

>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*

Probab=95.20  E-value=0.0091  Score=50.95  Aligned_cols=51  Identities=10%  Similarity=-0.011  Sum_probs=37.0

Q ss_pred             eeeccCCCCCCCCccEEEeeeec-cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          41 HKWTSSKPKKPDNLKIYESHVGI-CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        41 Y~~k~~~p~~p~~LrIYEaHVGm-ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |..--+|+.-..+ .|||.|++- +......|+|+..++. ||+||+||||.-|
T Consensus       220 ~~i~vdr~~~~~~-~iYEi~~rsf~~~~~~~Gd~~gi~~~-LdyLk~LGvt~I~  271 (695)
T 3zss_A          220 LPLLVERERALYG-AWYEFFPRSEGTPHTPHGTFRTAARR-LPAIAAMGFDVVY  271 (695)
T ss_dssp             EEEEEECHHHHCE-EEEECCGGGSCCSSCCSCCHHHHGGG-HHHHHHTTCCEEE
T ss_pred             eEeeecccccccc-eEEEEehhHhcCCCCCCCCHHHHHHH-HHHHHhCCCCEEE
Confidence            5444444322233 699999987 3333448999999998 9999999999765

>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1

Probab=95.13  E-value=0.0088  Score=48.57  Aligned_cols=40  Identities=5%  Similarity=0.060  Sum_probs=34.0

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||.|+.-  .+....+|+++.++++ |++||+||||.-|
T Consensus         8 ~~viYqi~~~~F~d~~~dg~Gdl~gi~~~-ldyl~~LGv~~I~   49 (558)
T 1uok_A            8 ESVVYQIYPRSFMDSNGDGIGDLRGIISK-LDYLKELGIDVIW   49 (558)
T ss_dssp             HCCEEEECGGGTCCSSSSSSCCHHHHHTT-HHHHHHHTCCEEE
T ss_pred             cCeEEEEecHHhcCCCCCCcCCHHHHHHH-HHHHHHcCCCEEE
Confidence            45699999987  3445679999999998 8999999999766

>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1

Probab=95.08  E-value=0.011  Score=46.87  Aligned_cols=39  Identities=15%  Similarity=0.172  Sum_probs=30.2

Q ss_pred             ccEEEeeeec-c-CCCCcc------------cchHHhHhhhhhhhhccCCcccc
Q psy9005          54 LKIYESHVGI-C-TQEQKC------------ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        54 LrIYEaHVGm-s-see~kV------------~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ..|||.||.- + +....+            |+|+..+++ ||+||+||||.-|
T Consensus         9 ~viYqi~~~~F~~~~~~~~~~~~~~~~~~~gG~~~gi~~~-LdyL~~LGv~~I~   61 (484)
T 2aaa_A            9 QSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDH-LDYIEGMGFTAIW   61 (484)
T ss_dssp             CCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHT-HHHHHTTTCCEEE
T ss_pred             CcEEEEeCccccCCCCCCCCCCCccccccCCCCHHHHHHH-HHHHHhcCCCEEE
Confidence            4599999976 2 222222            999999998 8999999999766

>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A

Probab=93.88  E-value=0.038  Score=45.19  Aligned_cols=41  Identities=10%  Similarity=0.008  Sum_probs=31.6

Q ss_pred             CCccEEEeeeeccCC-----------------CC-----cccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGICTQ-----------------EQ-----KCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGmsse-----------------e~-----kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ....|||.|+.--+.                 ++     ..|+|+..++. ||+||+||||.-|
T Consensus       129 ~~~viYqi~~~~F~~~~~~~~~~~~~~w~~~~~~~~~~f~~G~~~gi~~~-LdyLk~LGvt~I~  191 (585)
T 1wzl_A          129 KEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDR-LPYLEELGVTALY  191 (585)
T ss_dssp             GGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             ccceEEEEcchhhcCCCcccccccccccCccCCCcccccCCCCHHHHHHH-hHHHHHcCCCEEE
Confidence            567899999876211                 11     25799999998 8999999999755

>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A

Probab=91.32  E-value=0.054  Score=45.14  Aligned_cols=34  Identities=6%  Similarity=-0.091  Sum_probs=29.5

Q ss_pred             ccEEEeeeeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          54 LKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        54 LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ..|||+|++-=+     |+|+..+++ |++||+||||.-|
T Consensus        91 ~viY~i~~~~F~-----Gdl~gi~~~-LdyL~~LGv~~I~  124 (644)
T 3czg_A           91 MLGYSAYADRFA-----GTLQGVAER-VPYLQELGVRYLH  124 (644)
T ss_dssp             CCEEEECHHHHH-----SSHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cEEEEEechhhC-----CCHHHHHHH-HHHHHHcCCCEEE
Confidence            679999997533     899999998 7999999999766

>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}

Probab=90.74  E-value=0.19  Score=41.39  Aligned_cols=41  Identities=5%  Similarity=-0.018  Sum_probs=30.7

Q ss_pred             CCccEEEeeeec---cCCCCcc---------cchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGI---CTQEQKC---------ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm---ssee~kV---------~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      +.-.|||.|+.-   +.....+         |+++-.+++ ||+||+||||.-|
T Consensus       205 ~~aViYqI~p~~F~~~~~~~g~~~~~~~~~gGdl~Gi~~k-LdYLk~LGvt~I~  257 (645)
T 4aef_A          205 IDRVFYQIMPDKFARSRKIQGIAYPKDKYWGGDLIGIKEK-IDHLVNLGINAIY  257 (645)
T ss_dssp             GGCCEEEECHHHHCCCSSCC---------CCCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cCCEEEEEecchhcCCCCCCcccCCcCcCCCcCHHHHHHh-hHHHHHcCCCEEE
Confidence            345699999975   1111233         899999999 9999999999866

>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*

Probab=90.53  E-value=0.11  Score=40.93  Aligned_cols=37  Identities=8%  Similarity=0.047  Sum_probs=30.7

Q ss_pred             CccEEEeeeeccCCCCcccc-hHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGICTQEQKCAS-YEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGmssee~kV~T-Y~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||+++--.++   -|+ |+..+++ ||+||+||||.-|
T Consensus         9 ~~viyq~f~w~~~~---~G~~~~gi~~~-Ldyl~~lGvt~I~   46 (435)
T 1mxg_A            9 GGVIMQAFYWDVPG---GGIWWDHIRSK-IPEWYEAGISAIW   46 (435)
T ss_dssp             TCCEEECCCTTCCC---SSCHHHHHHHH-HHHHHHHTCCEEE
T ss_pred             CcEEEEEEEeccCC---CCCHHHHHHHH-HHHHHHcCCCEEE
Confidence            44699999886544   478 9999998 8999999999766

>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*

Probab=90.36  E-value=0.071  Score=44.37  Aligned_cols=34  Identities=6%  Similarity=-0.209  Sum_probs=29.6

Q ss_pred             ccEEEeeeeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          54 LKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        54 LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ..|||+|+..-+     |+++..++. |++||+||||.-|
T Consensus        98 ~viY~~~~~~f~-----Gdl~gi~~~-LdyL~~LGv~~I~  131 (628)
T 1g5a_A           98 QVGGVCYVDLFA-----GDLKGLKDK-IPYFQELGLTYLH  131 (628)
T ss_dssp             CCEEEECHHHHH-----SSHHHHHTT-HHHHHHHTCSEEE
T ss_pred             cEEEEEchhhhC-----CCHHHHHHH-HHHHHHcCCCEEE
Confidence            679999998643     889999998 7999999999866

>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A

Probab=90.06  E-value=0.12  Score=42.88  Aligned_cols=40  Identities=18%  Similarity=0.217  Sum_probs=30.1

Q ss_pred             CCccEEEe-----eeec---cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYES-----HVGI---CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEa-----HVGm---ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ..-.|||+     |++.   +.++ .-|+|+..+++ ||+||+||||.-|
T Consensus       121 ~~~viyq~F~w~~~~~~f~~~~~~-~gG~~~gi~~~-LdyLk~LGvtaIw  168 (599)
T 3bc9_A          121 VNHTILQAFYWEMNTGEYATEHPE-EANLWNLLAER-APELAEAGFTAVW  168 (599)
T ss_dssp             CCCCEEECCCTTTTSHHHHHHCGG-GGGHHHHHHHH-HHHHHHHTCCEEE
T ss_pred             cCceEEEEeeccccccccccCCCC-CCCCHHHHHHH-HHHHHHcCCCEEE
Confidence            45679995     5544   1222 33899999998 8999999999866

>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*

Probab=90.02  E-value=0.091  Score=43.88  Aligned_cols=35  Identities=6%  Similarity=-0.103  Sum_probs=29.9

Q ss_pred             CccEEEeeeeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||+|+.-=+     |+++..++. ||+|++||||.-|
T Consensus        95 ~~viY~~~~~~f~-----G~~~gl~~~-LdyL~~lGv~~v~  129 (655)
T 3ucq_A           95 EMVGYVAYTDRFA-----GTLKGVEER-LDYLEGLGVKYLH  129 (655)
T ss_dssp             TCCEEEECHHHHH-----SSHHHHHTT-HHHHHHTTCCEEE
T ss_pred             ceEEEEEehhhhC-----CCHHHHHHh-hHHHHHcCCCEEE
Confidence            3479999997633     899999998 9999999999866

>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A

Probab=89.34  E-value=0.22  Score=41.09  Aligned_cols=22  Identities=0%  Similarity=-0.197  Sum_probs=20.2

Q ss_pred             cchHHhHhhhhhhhhc-cCCcccc
Q psy9005          71 ASYEDFVRVHEERNLA-ATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLPrIk~-lG~~~~~   93 (99)
                      |+|+..+++ ||+||+ ||||.-|
T Consensus       188 G~~~gi~~~-LdyLk~~LGvt~I~  210 (637)
T 1ji1_A          188 GDLAGIDQK-LGYIKKTLGANILY  210 (637)
T ss_dssp             CCHHHHHHT-HHHHHTTTCCCEEE
T ss_pred             cCHHHHHHh-HHHHHhccCCCEEE
Confidence            899999998 899999 9999765

>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1

Probab=88.79  E-value=0.15  Score=41.69  Aligned_cols=23  Identities=4%  Similarity=0.039  Sum_probs=20.6

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+|+..++. ||+||+||||.-|
T Consensus       168 ~Gd~~gi~~~-LdyLk~LGvt~I~  190 (583)
T 1ea9_C          168 GGDLQGVIDH-LDHLSKLGVNAVY  190 (583)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCSEEE
T ss_pred             CcCHHHHHHh-hHHHHHcCCCEEE
Confidence            4799999998 8999999999765

>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}

Probab=87.97  E-value=0.31  Score=38.20  Aligned_cols=23  Identities=9%  Similarity=-0.074  Sum_probs=21.2

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+|+..+++ |++||+||||.-|
T Consensus        46 ~G~~~gi~~~-LdyL~~LGv~~I~   68 (475)
T 2z1k_A           46 GGTLWGVAEK-LPYLLDLGVEAIY   68 (475)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CCCHHHHHHH-hHHHHHcCCCEEE
Confidence            7999999998 8999999999766

>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*

Probab=87.03  E-value=0.42  Score=38.98  Aligned_cols=23  Identities=4%  Similarity=0.078  Sum_probs=20.7

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+|+..++. ||+||+||||.-|
T Consensus       172 ~G~~~gi~~~-LdyLk~LGvt~I~  194 (588)
T 1j0h_A          172 GGDLQGIIDH-LDYLVDLGITGIY  194 (588)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CCCHHHHHHH-HHHHHHcCCCEEE
Confidence            5799999998 8999999999765

>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A

Probab=86.57  E-value=0.68  Score=38.52  Aligned_cols=22  Identities=14%  Similarity=0.302  Sum_probs=20.6

Q ss_pred             cchHHhHhhhhh--hhhccCCcccc
Q psy9005          71 ASYEDFVRVHEE--RNLAATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLP--rIk~lG~~~~~   93 (99)
                      |+++..+++ |+  +||+||||.-|
T Consensus        52 Gdl~gi~~k-Ld~~yLk~LGvtaIw   75 (683)
T 3bmv_A           52 GDWQGIINK-INDGYLTGMGVTAIW   75 (683)
T ss_dssp             CCHHHHHHH-HHTSTTGGGTCCEEE
T ss_pred             cCHHHHHHh-cCHHHHHHcCCCEEE
Confidence            899999999 99  99999999876

>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}

Probab=86.46  E-value=0.38  Score=40.20  Aligned_cols=48  Identities=8%  Similarity=0.072  Sum_probs=35.7

Q ss_pred             cCCCCCC---CCccEEEeeeeccCCC----------------C---cccchHHhHhhhhhhhhccCCcccc
Q psy9005          45 SSKPKKP---DNLKIYESHVGICTQE----------------Q---KCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        45 ~~~p~~p---~~LrIYEaHVGmssee----------------~---kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .+.++.|   +...||+.|+.-=...                .   ..|+++-.+++ ||+||+||||.-|
T Consensus       214 ~~~~~~p~W~~~~viYqI~p~rF~~~~~~n~~~~~~~w~~~~~~~~~gGdl~Gi~~k-LdyLk~LGvt~Iw  283 (696)
T 4aee_A          214 IPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPPNRIKKTVPREYGYYGGDLAGIMKH-IDHLEDLGVETIY  283 (696)
T ss_dssp             CCBCSSCCTTSSCCEEEECGGGTCCCCGGGCCSSCCCCCSSCCSSCCCCCHHHHHTT-HHHHHHHTCCEEE
T ss_pred             cCCCCCcchhhcCeEEEEehHHhcCCCCCCCccccccccCCcccccCCcCHHHHHHH-hHHHHHcCCCEEE
Confidence            3444444   5678999999862111                1   47899999998 9999999999766

>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...

Probab=85.50  E-value=0.61  Score=38.83  Aligned_cols=22  Identities=14%  Similarity=0.302  Sum_probs=20.5

Q ss_pred             cchHHhHhhhhh--hhhccCCcccc
Q psy9005          71 ASYEDFVRVHEE--RNLAATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLP--rIk~lG~~~~~   93 (99)
                      |+++..+++ ||  +||+||||.-|
T Consensus        52 Gdl~gi~~k-Ld~~yLk~LGvt~Iw   75 (686)
T 1d3c_A           52 GDWQGIINK-INDGYLTGMGVTAIW   75 (686)
T ss_dssp             CCHHHHHHH-HHTTTTGGGTCCEEE
T ss_pred             cCHHHHHHh-cCHHHHHhcCCCEEE
Confidence            899999998 99  99999999866

>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A

Probab=83.68  E-value=0.53  Score=42.39  Aligned_cols=38  Identities=16%  Similarity=0.113  Sum_probs=29.7

Q ss_pred             CCccEEEeeeeccC-----CCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGICT-----QEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGmss-----ee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ++..|||   |.+.     .+..-+||+..+++ ||+||+||||.-|
T Consensus       662 ~~~VIYE---GFt~~~~~~~~~~~gt~~gi~~k-ldyLk~LGVtaIw  704 (1039)
T 3klk_A          662 DSNVIYE---GFSNFIYWPTTESERTNVRIAQN-ADLFKSWGITTFE  704 (1039)
T ss_dssp             HTCCEEE---CCCTTBCCCSSGGGCHHHHHHHT-HHHHHHTTCCEEE
T ss_pred             CCcEEEc---cccccCCCCCCCCCCCHHHHHHH-HHHHHHcCCCEEE
Confidence            4668999   6642     22334799999998 9999999999876

>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A

Probab=83.46  E-value=0.61  Score=36.79  Aligned_cols=23  Identities=0%  Similarity=-0.098  Sum_probs=21.2

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+++-.+++ |++||+||||.-|
T Consensus        52 ~Gdl~gi~~~-LdyL~~LGv~~I~   74 (488)
T 2wc7_A           52 GGDLWGIMED-LDYIQNLGINAIY   74 (488)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CcCHHHHHHh-hHHHHHcCCCEEE
Confidence            8999999997 9999999999766

>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*

Probab=80.62  E-value=1.3  Score=36.83  Aligned_cols=23  Identities=17%  Similarity=0.114  Sum_probs=21.1

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+++..+++ |++||+||||.-|
T Consensus        48 gGdl~gi~~k-LdyLk~LGv~aIw   70 (686)
T 1qho_A           48 GGDLEGVRQK-LPYLKQLGVTTIW   70 (686)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CCCHHHHHHh-hHHHHhcCCCEEE
Confidence            4899999999 9999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d1m7xa3	396	1,4-alpha-glucan branching enzyme, central domain	98.8
d1eh9a3	400	Glycosyltrehalose trehalohydrolase, central domain	98.16
d2bhua3	420	Glycosyltrehalose trehalohydrolase, central domain	98.13
d1bf2a3	475	Isoamylase, central domain {Pseudomonas amyloderam	97.86
d2fhfa5	563	Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57	97.63
d1lwha2	391	4-alpha-glucanotransferase {Thermotoga maritima [T	97.37
d1m53a2	478	Isomaltulose synthase PalI {Klebsiella sp., lx3 [T	97.05
d1uoka2	479	Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13	96.84
d1wzla3	382	Maltogenic amylase, central domain {Thermoactinomy	96.46
d1j0ha3	382	Neopullulanase, central domain {Bacillus stearothe	96.38
d1gjwa2	572	Maltosyltransferase {Thermotoga maritima [TaxId: 2	96.05
d1wzaa2	409	Bacterial alpha-amylase {Halothermothrix orenii [T	96.01
d1m7xa1	110	1,4-alpha-glucan branching enzyme, N-terminal doma	95.85
d1ea9c3	382	Maltogenic amylase, central domain {Bacillus sp.,	94.93
d2aaaa2	381	Fungal alpha-amylases {Aspergillus niger, acid amy	94.47
d2guya2	381	Fungal alpha-amylases {Aspergillus oryzae, Taka-am	94.24
d1ud2a2	390	Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta	92.47
d1h3ga3	422	Cyclomaltodextrinase, central domain {Flavobacteri	87.48
d1gcya2	357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	87.11
d1e43a2	393	Bacterial alpha-amylase {Chimera (Bacillus amyloli	86.69
d1ht6a2	347	Plant alpha-amylase {Barley (Hordeum vulgare), AMY	86.53
d3bmva4	406	Cyclodextrin glycosyltransferase {Thermoanaerobact	85.46
d1ua7a2	344	Bacterial alpha-amylase {Bacillus subtilis [TaxId:	85.04
d1hvxa2	393	Bacterial alpha-amylase {Bacillus stearothermophil	83.79

>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: 1,4-alpha-glucan branching enzyme, central domain
species: Escherichia coli [TaxId: 562]

Probab=98.80  E-value=5.3e-10  Score=79.94  Aligned_cols=52  Identities=19%  Similarity=0.206  Sum_probs=45.0

Q ss_pred             CeeeccCCCCCCCCccEEEeeeec---cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          40 KHKWTSSKPKKPDNLKIYESHVGI---CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        40 ~Y~~k~~~p~~p~~LrIYEaHVGm---ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .+.|+.+++.+|  |.|||+||+.   ++++..+|+|+.+++++||+|++||||.-|
T Consensus         5 ~~~~~~~~~~~~--~~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iw   59 (396)
T d1m7xa3           5 EERKKANQFDAP--ISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLE   59 (396)
T ss_dssp             HHHHHHHSTTSC--CEEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEE
T ss_pred             cccccCCCCCCC--cEEEEEccCccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence            466777777655  7899999999   777888999999999977999999999876

>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Glycosyltrehalose trehalohydrolase, central domain
species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]

Probab=98.16  E-value=4.4e-07  Score=66.33  Aligned_cols=47  Identities=28%  Similarity=0.362  Sum_probs=39.5

Q ss_pred             eccCCCCCCCCccEEEeeeeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          43 WTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        43 ~k~~~p~~p~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |.+..+.+.+.|.|||+||+.-++.   |+|+.++++ ||+||+||||.-|
T Consensus         1 ~~~~~~~~~~~~viYe~~v~~f~~~---Gd~~gi~~~-ldyi~~LGv~~i~   47 (400)
T d1eh9a3           1 FNNETFLKKEDLIIYEIHVGTFTPE---GTFEGVIRK-LDYLKDLGITAIE   47 (400)
T ss_dssp             CCSCCSCCSSSCCEEEECTTTSSSS---CSHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CCCCCcCCCcCeEEEEEehhhhCCC---CCHHHHHHH-hHHHHHcCCCEEE
Confidence            3455566667899999999997765   999999998 9999999999765

>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Glycosyltrehalose trehalohydrolase, central domain
species: Deinococcus radiodurans [TaxId: 1299]

Probab=98.13  E-value=3.6e-07  Score=67.90  Aligned_cols=49  Identities=24%  Similarity=0.261  Sum_probs=42.3

Q ss_pred             eeeccCCCCCC--CCccEEEeeeeccCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          41 HKWTSSKPKKP--DNLKIYESHVGICTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        41 Y~~k~~~p~~p--~~LrIYEaHVGmssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |+|.+..++.+  ..+.|||+||+.-++.   |+|+.++++ |++||+||||.-|
T Consensus         2 ~~w~~~~~~~~~~~~~viYe~~~~~f~~~---Gd~~g~~~~-ldyl~~LGv~~i~   52 (420)
T d2bhua3           2 FDWTDADWHGIKLADCVFYEVHVGTFTPE---GTYRAAAEK-LPYLKELGVTAIQ   52 (420)
T ss_dssp             SCCCCTTCCCCCGGGCCEEEECHHHHSSS---CSHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cCCCCCCCCCCCccccEEEEEehhhcCCC---CCHHHHHHh-HHHHHHcCCCEEE
Confidence            88988888654  5888999999986654   999999998 9999999999765

>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=97.86  E-value=2e-06  Score=64.30  Aligned_cols=47  Identities=23%  Similarity=0.108  Sum_probs=37.1

Q ss_pred             CCCC-CCCccEEEeeeec-c-----CCCCcccchHHhHhhhhhhhhccCCccccc
Q psy9005          47 KPKK-PDNLKIYESHVGI-C-----TQEQKCASYEDFVRVHEERNLAATVTSSWK   94 (99)
Q Consensus        47 ~p~~-p~~LrIYEaHVGm-s-----see~kV~TY~eF~~~VLPrIk~lG~~~~~~   94 (99)
                      +|++ .+.+.|||+||+- +     ..+..+|+++-++++ ||+|++||+|.-|-
T Consensus         9 ~~~~~~~d~viYei~v~~f~~~~~~~~~~~~Gd~~Gi~~k-Ldyl~~LGvnaiwl   62 (475)
T d1bf2a3           9 KPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLK-ASYLASLGVTAVEF   62 (475)
T ss_dssp             CCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHT-HHHHHHHTCCEEEE
T ss_pred             CCCCCCcceEEEEEEhhHhccCCCCCCccccCCHHHHHhh-hHHHHHcCCCEEEe
Confidence            4433 3678899999985 2     225668999999998 99999999998763

>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Pullulanase PulA
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.63  E-value=7.5e-06  Score=61.37  Aligned_cols=42  Identities=19%  Similarity=0.106  Sum_probs=33.2

Q ss_pred             CCccEEEeeeec-c-CCCCc----ccchHHhHhhh------hhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGI-C-TQEQK----CASYEDFVRVH------EERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm-s-see~k----V~TY~eF~~~V------LPrIk~lG~~~~~   93 (99)
                      +.+.|||+||+- + +....    .|+|+-|++..      |++|++||||.-|
T Consensus        20 ~~~viYei~vr~F~d~~~d~~~~~~G~f~~~~~~~~~~i~~LdyL~~LGVtaiw   73 (563)
T d2fhfa5          20 AKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIE   73 (563)
T ss_dssp             HTCEEEEECHHHHHTTCTTSCGGGTTSGGGGGCTTSHHHHHHHHHHHHTCCEEE
T ss_pred             HHcEEEEecchhhhccCCCCccccCcChhhccccCcchhhhHHHHHHcCCCEEE
Confidence            678999999965 2 32233    38999998875      9999999999866

>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: 4-alpha-glucanotransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=4.1e-05  Score=55.51  Aligned_cols=39  Identities=8%  Similarity=0.050  Sum_probs=34.4

Q ss_pred             ccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          54 LKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        54 LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |.|||.||+-  .+....+|+++..+++ |++||+||+|.-|
T Consensus         1 ~v~Yei~~~~F~d~~~dg~Gd~~gi~~k-Ldyl~~LGv~~I~   41 (391)
T d1lwha2           1 MIGYQIYVRSFRDGNLDGVGDFRGLKNA-VSYLKELGIDFVW   41 (391)
T ss_dssp             CCEEEECGGGTCCSSSSSSCCHHHHHHT-HHHHHHTTCSEEE
T ss_pred             CEEEEEccccccCCCCCCccCHHHHHHh-hHHHHHcCCCEEE
Confidence            5799999998  3556779999999999 8999999999765

>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isomaltulose synthase PalI
species: Klebsiella sp., lx3 [TaxId: 576]

Probab=97.05  E-value=0.00012  Score=54.30  Aligned_cols=40  Identities=8%  Similarity=0.113  Sum_probs=34.3

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||.||+-  .+....+|+|+-.+++ ||+||+||||.-|
T Consensus         8 ~~viYei~~~~F~d~~~~~~Gd~~Gi~~k-LdyLk~LGv~~I~   49 (478)
T d1m53a2           8 EAVFYQIYPRSFKDTNDDGIGDIRGIIEK-LDYLKSLGIDAIW   49 (478)
T ss_dssp             HCCEEEECGGGTCCSSSSSSCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cCeEEEEecchhcCCCCCCccCHHHHHHh-hHHHHHcCCCEEE
Confidence            34699999996  4566789999999999 8999999999755

>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Oligo-1,6, glucosidase
species: Bacillus cereus [TaxId: 1396]

Probab=96.84  E-value=0.00021  Score=52.84  Aligned_cols=40  Identities=5%  Similarity=0.060  Sum_probs=33.9

Q ss_pred             CccEEEeeeec--cCCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          53 NLKIYESHVGI--CTQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        53 ~LrIYEaHVGm--ssee~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ...|||.||+-  .+....+|+|+-.+++ |++||+||+|.-|
T Consensus         8 ~~viYei~~~~F~d~~~~~~Gd~~gi~~k-LdYLk~LGv~~I~   49 (479)
T d1uoka2           8 ESVVYQIYPRSFMDSNGDGIGDLRGIISK-LDYLKELGIDVIW   49 (479)
T ss_dssp             HCCEEEECGGGTCCSSSSSSCCHHHHHTT-HHHHHHHTCCEEE
T ss_pred             cCeEEEEEcchhcCCCCCCCcCHHHHHHh-hHHHHHcCCCEEE
Confidence            35699999997  2445678999999999 9999999999765

>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Maltogenic amylase, central domain
species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]

Probab=96.46  E-value=0.00084  Score=48.20  Aligned_cols=23  Identities=9%  Similarity=-0.041  Sum_probs=20.9

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|||+.++++ ||+||+||||.-|
T Consensus        49 ~G~~~gi~~k-Ldyl~~lGi~~I~   71 (382)
T d1wzla3          49 GGDLKGVIDR-LPYLEELGVTALY   71 (382)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CcCHHHHHHh-hHHHHHCCCCEEE
Confidence            5999999999 8999999999755

>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Neopullulanase, central domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.38  E-value=0.00083  Score=48.36  Aligned_cols=23  Identities=4%  Similarity=0.078  Sum_probs=20.9

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      -|||+.++++ ||+|++||||.-|
T Consensus        49 ~G~~~gi~~k-ldyl~~LGv~~i~   71 (382)
T d1j0ha3          49 GGDLQGIIDH-LDYLVDLGITGIY   71 (382)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CcCHHHHHHh-HHHHHHcCCCEEE
Confidence            3899999999 9999999999866

>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Maltosyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.05  E-value=0.0011  Score=50.05  Aligned_cols=41  Identities=5%  Similarity=0.024  Sum_probs=30.9

Q ss_pred             CCccEEEeeeec--cCCCCc--------------ccchHHhHhhhhhhhhccCCcccc
Q psy9005          52 DNLKIYESHVGI--CTQEQK--------------CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        52 ~~LrIYEaHVGm--ssee~k--------------V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ....|||+||.=  .+....              -|||+-.++. ||+||+||||.-|
T Consensus        82 ~~~viYei~v~~F~~~~~~g~~~~~~~~~~g~~~~Gd~~Gi~~k-LdYLk~LGvtaI~  138 (572)
T d1gjwa2          82 KRSVVYGSLPRTTAAYNHKGSGYYEENDVLGFREAGTFFKMMLL-LPFVKSLGADAIY  138 (572)
T ss_dssp             GGCCEEEECHHHHTCCCTTSSSCCCSBCTTSCBCSCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             cCcEEEEEechhhcCCCCCCCcccccCcccCccCCCCHHHHHHh-hHHHHHcCCCEEE
Confidence            455799999964  122222              2899999987 9999999999866

>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Bacterial alpha-amylase
species: Halothermothrix orenii [TaxId: 31909]

Probab=96.01  E-value=0.0017  Score=46.27  Aligned_cols=38  Identities=13%  Similarity=0.177  Sum_probs=31.5

Q ss_pred             cEEEeeeec--cCCCCcccchHHhHhhhhhh--------hhccCCcccc
Q psy9005          55 KIYESHVGI--CTQEQKCASYEDFVRVHEER--------NLAATVTSSW   93 (99)
Q Consensus        55 rIYEaHVGm--ssee~kV~TY~eF~~~VLPr--------Ik~lG~~~~~   93 (99)
                      .|||.||+-  .+....+|+|+..+++ ||+        ||+||||.-|
T Consensus         6 v~Y~~~~~~f~d~~~~~~Gd~~g~~~k-Ldyl~~~~~~~i~~LGv~~i~   53 (409)
T d1wzaa2           6 TYYEIFVRSFYDSDGDGIGDLKGIIEK-LDYLNDGDPETIADLGVNGIW   53 (409)
T ss_dssp             CEEEECGGGSCCSSSSSCCCHHHHHHT-HHHHCCSCTTCCSSCCCSEEE
T ss_pred             EEEEEecchhcCCCCCCCcCHHHHHHh-ccccccccccHHhhcCccEEE
Confidence            699999996  4555678999999998 766        5899999755

>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: 1,4-alpha-glucan branching enzyme, N-terminal domain N
species: Escherichia coli [TaxId: 562]

Probab=95.85  E-value=0.0029  Score=40.44  Aligned_cols=30  Identities=17%  Similarity=0.058  Sum_probs=26.1

Q ss_pred             cCceeEEecCccceEEecCCCCCCceeeEEeCCC
Q psy9005           3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPK   36 (99)
Q Consensus         3 ~~~~~~dRIPawa~~v~q~~~~~~~f~~~~w~P~   36 (99)
                      .+|+++++++|||+++++++. +   ..+||+.|
T Consensus        79 ~~G~~~~~~DPYA~~~e~~p~-~---aSvv~dlp  108 (110)
T d1m7xa1          79 ANGNLRLKSDPYAFEAQMRPE-T---ASLICGLP  108 (110)
T ss_dssp             TTSCEEEECCTTCSSEECTTT-C---EEECCCCC
T ss_pred             CCCcEeEEcChhhcccccCCC-C---eEEEecCC
Confidence            468999999999999999876 4   68999976

>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Maltogenic amylase, central domain
species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]

Probab=94.93  E-value=0.0048  Score=43.97  Aligned_cols=23  Identities=4%  Similarity=0.039  Sum_probs=20.7

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|||+.++++ ||+||+||||.-|
T Consensus        47 ~Gd~~gi~~k-Ldylk~LGv~~i~   69 (382)
T d1ea9c3          47 GGDLQGVIDH-LDHLSKLGVNAVY   69 (382)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCSEEE
T ss_pred             CcCHHHHHHh-hHHHHhCCCCEEE
Confidence            4999999999 8999999999754

>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Fungal alpha-amylases
species: Aspergillus niger, acid amylase [TaxId: 5061]

Probab=94.47  E-value=0.011  Score=43.00  Aligned_cols=22  Identities=14%  Similarity=0.270  Sum_probs=20.3

Q ss_pred             cchHHhHhhhhhhhhccCCcccc
Q psy9005          71 ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |+++-.+++ ||+||+||||.-|
T Consensus        40 G~~~g~~~k-LdyL~~LGv~~I~   61 (381)
T d2aaaa2          40 GSWQGIIDH-LDYIEGMGFTAIW   61 (381)
T ss_dssp             CCHHHHHHT-HHHHHTTTCCEEE
T ss_pred             cCHHHHHHH-HHHHHHcCCCEEE
Confidence            899999998 9999999999765

>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Fungal alpha-amylases
species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]

Probab=94.24  E-value=0.012  Score=42.69  Aligned_cols=38  Identities=13%  Similarity=0.181  Sum_probs=28.9

Q ss_pred             cEEEeeeec--cCCCCcc------------cchHHhHhhhhhhhhccCCcccc
Q psy9005          55 KIYESHVGI--CTQEQKC------------ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        55 rIYEaHVGm--ssee~kV------------~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .||+.||.-  .+....+            |+++..+++ ||+||+||||.-|
T Consensus        10 ~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~~-Ldyl~~LGv~~I~   61 (381)
T d2guya2          10 SIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDK-LDYIQGMGFTAIW   61 (381)
T ss_dssp             CEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHT-HHHHHTTTCCEEE
T ss_pred             eEEEEEcchhcCCCCCCCCCCCCccCccCCcCHHHHHHh-HHHHHHCCCCEEE
Confidence            589999953  1111222            899999998 9999999999766

>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Bacterial alpha-amylase
species: Bacillus sp., ksm-k38 [TaxId: 1409]

Probab=92.47  E-value=0.014  Score=40.13  Aligned_cols=22  Identities=14%  Similarity=0.237  Sum_probs=20.2

Q ss_pred             cchHHhHhhhhhhhhccCCcccc
Q psy9005          71 ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      ++|++.+++ ||+||+||||.-|
T Consensus        20 ~~~~~i~~k-LdyLk~LGvt~I~   41 (390)
T d1ud2a2          20 QHWNRLHDD-AAALSDAGITAIW   41 (390)
T ss_dssp             CHHHHHHHH-HHHHHHHTCCEEE
T ss_pred             CCHHHHHHH-HHHHHHcCCCEEE
Confidence            799999999 8999999999755

>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Cyclomaltodextrinase, central domain
species: Flavobacterium sp. 92 [TaxId: 197856]

Probab=87.48  E-value=0.11  Score=37.12  Aligned_cols=23  Identities=9%  Similarity=0.069  Sum_probs=20.8

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .|+++-.+++ ||+||+||||.-|
T Consensus        49 gGd~~Gl~~k-Ldyl~~LGv~~I~   71 (422)
T d1h3ga3          49 GGDIRGTIDH-LDYIAGLGFTQLW   71 (422)
T ss_dssp             CCCHHHHHHT-HHHHHHHTCCEEE
T ss_pred             CcCHHHHHHh-HHHHHHCCCCEEE
Confidence            4899999999 9999999999765

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase)
species: Pseudomonas stutzeri [TaxId: 316]

Probab=87.11  E-value=0.086  Score=36.77  Aligned_cols=23  Identities=13%  Similarity=0.167  Sum_probs=20.5

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      -++|+..+++ ||+||+||||.-|
T Consensus        33 ~~~~~~i~~k-l~yl~~lGv~aIw   55 (357)
T d1gcya2          33 NDWYNILRQQ-AATIAADGFSAIW   55 (357)
T ss_dssp             TTHHHHHHHH-HHHHHHTTCSEEE
T ss_pred             CcHHHHHHHH-HHHHHHcCCCEEE
Confidence            3579999999 9999999999866

>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Bacterial alpha-amylase
species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]

Probab=86.69  E-value=0.079  Score=38.16  Aligned_cols=22  Identities=14%  Similarity=0.294  Sum_probs=20.4

Q ss_pred             cchHHhHhhhhhhhhccCCcccc
Q psy9005          71 ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      |+|+..+++ ||+||+||||.-|
T Consensus        18 g~~~gi~~k-Ldylk~LGvtaI~   39 (393)
T d1e43a2          18 QHWKRLQND-AEHLSDIGITAVW   39 (393)
T ss_dssp             CHHHHHHHH-HHHHHHHTCCEEE
T ss_pred             CCHHHHHHH-HHHHHHcCCCEEE
Confidence            789999999 9999999999866

>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Plant alpha-amylase
species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]

Probab=86.53  E-value=0.086  Score=36.09  Aligned_cols=28  Identities=25%  Similarity=0.279  Sum_probs=23.3

Q ss_pred             CCCCcccchHHhHhhhhhhhhccCCcccc
Q psy9005          65 TQEQKCASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        65 see~kV~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      +.....|+|+..+++ ||+||+||||.-|
T Consensus        12 ~~~~~~g~~~~i~~k-Ldyl~~lGv~~i~   39 (347)
T d1ht6a2          12 SWKQSGGWYNMMMGK-VDDIAAAGVTHVW   39 (347)
T ss_dssp             GGGCTTCHHHHHHTT-HHHHHHTTCCEEE
T ss_pred             cCCCCCCCHHHHHHh-HHHHHHcCCCEEE
Confidence            334567999999999 9999999999644

>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Cyclodextrin glycosyltransferase
species: Thermoanaerobacterium [TaxId: 28895]

Probab=85.46  E-value=0.24  Score=35.42  Aligned_cols=23  Identities=13%  Similarity=0.260  Sum_probs=20.4

Q ss_pred             ccchHHhHhhhhh--hhhccCCcccc
Q psy9005          70 CASYEDFVRVHEE--RNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLP--rIk~lG~~~~~   93 (99)
                      -|+++-.+++ |+  +||+||||.-|
T Consensus        51 gGdl~Gi~~k-Ld~~YLk~LGv~~I~   75 (406)
T d3bmva4          51 GGDWQGIINK-INDGYLTGMGVTAIW   75 (406)
T ss_dssp             CCCHHHHHHH-HHTSTTGGGTCCEEE
T ss_pred             CcCHHHHHHh-cCHHHHHHcCCCEEE
Confidence            4899999999 87  99999999765

>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Bacterial alpha-amylase
species: Bacillus subtilis [TaxId: 1423]

Probab=85.04  E-value=0.14  Score=36.78  Aligned_cols=22  Identities=14%  Similarity=-0.050  Sum_probs=20.0

Q ss_pred             cchHHhHhhhhhhhhccCCcccc
Q psy9005          71 ASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        71 ~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      .||++.+++ |++||+||||.-|
T Consensus        14 ~~f~~i~~~-ldyl~~lGv~aIw   35 (344)
T d1ua7a2          14 WSFNTLKHN-MKDIHDAGYTAIQ   35 (344)
T ss_dssp             BCHHHHHHT-HHHHHHTTCSEEE
T ss_pred             CcHHHHHHh-HHHHHHcCCCEEE
Confidence            479999999 8999999999877

>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Bacterial alpha-amylase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.79  E-value=0.15  Score=36.39  Aligned_cols=23  Identities=9%  Similarity=0.195  Sum_probs=20.4

Q ss_pred             ccchHHhHhhhhhhhhccCCcccc
Q psy9005          70 CASYEDFVRVHEERNLAATVTSSW   93 (99)
Q Consensus        70 V~TY~eF~~~VLPrIk~lG~~~~~   93 (99)
                      =++|++.+++ ||+||+||||.-|
T Consensus        20 ~~~~~~i~~k-LdyLk~LGv~aI~   42 (393)
T d1hvxa2          20 GTLWTKVANE-ANNLSSLGITALW   42 (393)
T ss_dssp             SCHHHHHHHH-HHHHHHTTCCEEE
T ss_pred             CChHHHHHHH-HHHHHHcCCCEEE
Confidence            3679999999 9999999999766