Psyllid ID: psy9057

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MADTSKLSESEYSVKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRNYSEDSSNNIDEEVKELENNYRKTQLLTILAQGELKMLKEIECAMQDHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcHHHHHHHccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHccccccccHHHcccccccHHHHccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccHHHHHHHHHHcccccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHHHHHHHHccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHEEEEEEEEEccHHHHcHccHHHHHHHHHcc
Coil and Loop (DISEMBL)
madtsklseseysvkFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFqnnlkgpleeFNTSISELFKiaphvlfpedevyrnysedssnniDEEVKELENNYRKTQLLTILAQGELKMLKEIECAMQdhklkssqKDKVKRFISFTqtgeltainclsqndwkldlasdnyfqnpsayykeqkssvdrkKLESLYSKykdasepdKILVEGIMKFlddlslspeskLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Flexible Loop (DISEMBL)
madtsklseseysvKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRNYSEDSSNNIDEEVKELENNYRKTQLLTILAQGELKMLKEIECAMQDhklkssqkdkVKRFISFtqtgeltainCLSQNDWKLDLASDNYFQNPSAYykeqkssvdrkKLESLYskykdasepdkILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Low Complexity Region (SEG)
MADTSKLSESEYSVKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRNYSEDSSNNIDEEVKELENNYRKTQLLTILAQGELKMLKEIECAMQDHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Disordered region (IsUnstruct)
***********YSVKFFGYSTLTVQQDFERKLISLLNSNIKAL***********************FKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRN******************NYRKTQLLTILAQGELKMLKEIECAM************VKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAY***************************KILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSR**********
Disordered Region (DISOPRED)
**********EYSVKFFGYSTLTVQQDFERKLISLLNSNIKAL*******************CMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVY********************************QGELKM**************************FTQTGELTAINCLSQNDWKLDLASDNYF******************LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Disordered Region (DISEMBL)
*********SEYSVKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRNYSEDSSNNIDEEVKELENNYRKTQLLTILAQGELKMLKEIECAMQDH*********VKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Disordered Region (DISPRO)
*********SEYSVKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRNYSEDSSNNIDEEVKELENNYRKTQLLTILAQGELKMLKEIECAMQDHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSA****QKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADTSKLSESEYSVKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKTDQHKQNLEKCMQKFKDTFQNNLKGPLEEFNTSISELFKIAPHVLFPEDEVYRNYSEDSxxxxxxxxxxxxxxxxxxxxxTILAQGELKMLKEIECAMQDHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	279	2.2.26 [Sep-21-2011]
Q9QZ73	259	DCN1-like protein 1 OS=Mu	yes	N/A	0.455	0.490	0.632	2e-42
Q96GG9	259	DCN1-like protein 1 OS=Ho	yes	N/A	0.455	0.490	0.632	3e-42
Q5ZKU1	259	DCN1-like protein 1 OS=Ga	no	N/A	0.455	0.490	0.632	3e-42
Q9VUQ8	288	DCN1-like protein OS=Dros	yes	N/A	0.437	0.423	0.637	2e-41
Q8BZJ7	259	DCN1-like protein 2 OS=Mu	no	N/A	0.455	0.490	0.617	7e-41
Q6PH85	259	DCN1-like protein 2 OS=Ho	no	N/A	0.455	0.490	0.601	2e-40
Q9U3C8	295	Defective in cullin neddy	yes	N/A	0.455	0.430	0.366	8e-19
Q60YT5	367	Defective in cullin neddy	N/A	N/A	0.419	0.318	0.352	1e-16
Q54GP1	249	DCN1-like protein 1 OS=Di	yes	N/A	0.430	0.481	0.314	1e-11
Q6DFA1	303	DCN1-like protein 3 OS=Xe	N/A	N/A	0.426	0.392	0.357	3e-10

>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 105/128 (82%), Gaps = 1/128 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
           +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct: 2   NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 61

Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct: 62  RKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 121

Query: 272 FMNGMLEL 279
           FM+GM EL
Sbjct: 122 FMDGMTEL 129

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic in vivo.
Mus musculus (taxid: 10090)

>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1

 Score =  172 bits (436), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 105/128 (82%), Gaps = 1/128 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
           +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct: 2   NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 61

Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct: 62  RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 121

Query: 272 FMNGMLEL 279
           FM+GM EL
Sbjct: 122 FMDGMTEL 129

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic progression.

Homo sapiens (taxid: 9606)

>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 105/128 (82%), Gaps = 1/128 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
           +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct: 2   NKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 61

Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct: 62  RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLE 121

Query: 272 FMNGMLEL 279
           FM+GM EL
Sbjct: 122 FMDGMTEL 129

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation.

Gallus gallus (taxid: 9031)

>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/127 (63%), Positives = 100/127 (78%), Gaps = 5/127 (3%)

Query: 154 KLKSS-QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           KLKSS  +DKVK+FIS T TGE TAI CL QNDWK +LASDNYFQNP  YY+E    +DR
Sbjct: 3   KLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE----LDR 58

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           K++E L+ +Y+D S+P KI  +G++ FL+DL L P+SKLVLIIAW+F A  QCEFSRDEF
Sbjct: 59  KRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEF 118

Query: 273 MNGMLEL 279
           +NGM +L
Sbjct: 119 INGMCDL 125

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Drosophila melanogaster (taxid: 7227)

>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3

 Score =  167 bits (423), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 79/128 (61%), Positives = 105/128 (82%), Gaps = 1/128 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKE-QKSSVD 211
           HKLKS+QKDKV++F++ TQ  E TAI CL+QN+WKLD A+D++FQNP A+++E  KSSVD
Sbjct: 2   HKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVD 61

Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           +KKLE LYS+YKD  + +KI ++GI +F DDLSL P S  VL+IAW+F+AA QCEFS+ E
Sbjct: 62  QKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKE 121

Query: 272 FMNGMLEL 279
           F++GM EL
Sbjct: 122 FVDGMTEL 129

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Mus musculus (taxid: 10090)

>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 104/128 (81%), Gaps = 1/128 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKE-QKSSVD 211
           HKLKSSQKDKV++F++ TQ GE TAI CL+QN+W+LD A+D++FQNP + ++E  +++VD
Sbjct: 2   HKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVD 61

Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           +KKLE LY +YKD  + +KI V+GI +F DDLSL P S  VL+IAW+F+AA QCEFSR E
Sbjct: 62  KKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKE 121

Query: 272 FMNGMLEL 279
           F++GM EL
Sbjct: 122 FLDGMTEL 129

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Homo sapiens (taxid: 9606)

>sp|Q9U3C8|DCN1_CAEEL Defective in cullin neddylation protein 1 OS=Caenorhabditis elegans GN=dcn-1 PE=1 SV=2

 Score = 94.4 bits (233), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 4/131 (3%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
           ++LKS QK K+++F+ +TQ  E  ++N L++ +W ++ A   YF NP+ +     + SVD
Sbjct: 2   NRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSVD 61

Query: 212 RKKLESLYSKY---KDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFS 268
           R  +E L+++Y   KD     ++   GI + L DL      + VL++AW+F A  QCEFS
Sbjct: 62  RSNIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEFS 121

Query: 269 RDEFMNGMLEL 279
            DE++ GM  L
Sbjct: 122 LDEWVKGMTAL 132

Required for neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. Does not act by preventing deneddylation, but rather facilitates neddylation, possibly by acting with rbx-1 to recruit the Nedd8-charged E2 enzyme to the cullin component of SCF-type complexes.

Caenorhabditis elegans (taxid: 6239)

>sp|Q60YT5|DCN1_CAEBR Defective in cullin neddylation protein 1 OS=Caenorhabditis briggsae GN=dcn-1 PE=3 SV=3

 Score = 87.4 bits (215), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 2/119 (1%)

Query: 163 VKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKY 222
           +++F+ +TQ  E  ++N L++ +W ++ A   Y+ NP+ +     ++VD+ K   L+++Y
Sbjct: 87  LRQFVQWTQATEPVSLNFLAKANWNIEYAMTLYYDNPNLFSSSAPATVDQSKTIQLFTQY 146

Query: 223 KDASEP--DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 279
            D  +   ++I   G+ + L DL   P  + VLI+AW FKA  QCEFS  EF NGM  L
Sbjct: 147 VDKRDGLGERIGPHGMQRLLIDLGYEPIDRRVLILAWVFKAETQCEFSLQEFTNGMASL 205

Required for neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. Does not act by preventing deneddylation, but rather facilitates neddylation, possibly by acting with rbx-1 to recruit the Nedd8-charged E2 enzyme to the cullin component of SCF-type complexes.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q54GP1|DCN1L_DICDI DCN1-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0290025 PE=3 SV=1

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 7/127 (5%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           ++L + QK K   F+S T+  E  AI  L    W+ D A DN++ NPS +     +  D+
Sbjct: 2   YRLPADQKLKCTEFMSITEATEAKAIQYLKDASWRTDAAVDNFYSNPSNF----ANKFDK 57

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           K +E++++KYKD+ E    + E + +F+ D++++ E  + L + W+FK       +++EF
Sbjct: 58  KAIETIFNKYKDSGEEQ--ISEKLPEFVKDININDEM-MELAVLWKFKTKQMGVITKNEF 114

Query: 273 MNGMLEL 279
           M  M  L
Sbjct: 115 METMERL 121

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6DFA1|DCNL3_XENLA DCN1-like protein 3 OS=Xenopus laevis GN=dcun1d3 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 7/126 (5%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HK  SS K++    I    +GE+  +N   + D  L+ AS           KEQ    + 
Sbjct: 28  HKRSSSHKEE-HMSICGKASGEIL-VNGTKKGDASLE-ASQPLAVGVDTKKKEQGVGAEL 84

Query: 213 ---KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSR 269
              +++E L+ +YKD  E D IL EG+ +F DDL + P    VL++AW+F+AA  C+F+R
Sbjct: 85  SSLQRIEELFRRYKDERE-DAILEEGMERFCDDLCVDPTEFRVLVLAWKFQAATMCKFTR 143

Query: 270 DEFMNG 275
            EF  G
Sbjct: 144 REFFEG 149

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	279
332029403	256	DCN1-like protein 1 [Acromyrmex echinati	0.465	0.507	0.769	4e-53
91081929	280	PREDICTED: similar to leucine zipper pro	0.451	0.45	0.787	5e-53
270007355	260	hypothetical protein TcasGA2_TC013916 [T	0.451	0.484	0.787	5e-53
322787464	253	hypothetical protein SINV_09204 [Solenop	0.455	0.501	0.779	5e-53
332373372	261	unknown [Dendroctonus ponderosae]	0.451	0.482	0.795	6e-53
345492889	258	PREDICTED: DCN1-like protein-like [Nason	0.455	0.492	0.771	8e-53
346470365	261	hypothetical protein [Amblyomma maculatu	0.455	0.486	0.763	1e-52
427796805	289	Putative dcn1-like protein 1, partial [R	0.473	0.456	0.714	2e-52
380010988	278	PREDICTED: DCN1-like protein 1-like [Api	0.498	0.5	0.698	1e-51
307202323	252	DCN1-like protein 1 [Harpegnathos saltat	0.451	0.5	0.769	4e-51

>gi|332029403|gb|EGI69357.1| DCN1-like protein 1 [Acromyrmex echinatior]

 Score =  214 bits (544), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/130 (76%), Positives = 117/130 (90%)

Query: 150 MQDHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSS 209
           M  HKLK SQ+DKVK+FI+FTQTGE TAI CL+QNDWKLDLASDNYFQNP AYYKE K+S
Sbjct: 1   MLQHKLKFSQRDKVKKFITFTQTGEQTAIYCLAQNDWKLDLASDNYFQNPEAYYKEPKNS 60

Query: 210 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSR 269
           VD+KKLE LYSKY+D SEP+KI  +GIMKFLDDL+LSPESKLVLIIAW+F+A  QCEF++
Sbjct: 61  VDKKKLEILYSKYQDPSEPNKITADGIMKFLDDLNLSPESKLVLIIAWKFRAETQCEFTK 120

Query: 270 DEFMNGMLEL 279
           +EFMNGM++L
Sbjct: 121 EEFMNGMVDL 130

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081929|ref|XP_966547.1| PREDICTED: similar to leucine zipper protein [Tribolium castaneum]

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 116/127 (91%), Gaps = 1/127 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HKLKSSQ++KVK+FISFTQTGE TAI CL+QNDWKLDLASDNYFQNP AYYKE ++ VD+
Sbjct: 22  HKLKSSQREKVKKFISFTQTGENTAIYCLTQNDWKLDLASDNYFQNPDAYYKEPRN-VDK 80

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           KKLE+LY++YKD +EPDKI V+GIM+FLDDL L PESKLVLIIAW+FKAA QCEF+RDEF
Sbjct: 81  KKLEALYNRYKDPNEPDKITVDGIMRFLDDLGLPPESKLVLIIAWKFKAATQCEFTRDEF 140

Query: 273 MNGMLEL 279
           +NGM EL
Sbjct: 141 VNGMTEL 147

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007355|gb|EFA03803.1| hypothetical protein TcasGA2_TC013916 [Tribolium castaneum]

 Score =  213 bits (543), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 116/127 (91%), Gaps = 1/127 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HKLKSSQ++KVK+FISFTQTGE TAI CL+QNDWKLDLASDNYFQNP AYYKE ++ VD+
Sbjct: 2   HKLKSSQREKVKKFISFTQTGENTAIYCLTQNDWKLDLASDNYFQNPDAYYKEPRN-VDK 60

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           KKLE+LY++YKD +EPDKI V+GIM+FLDDL L PESKLVLIIAW+FKAA QCEF+RDEF
Sbjct: 61  KKLEALYNRYKDPNEPDKITVDGIMRFLDDLGLPPESKLVLIIAWKFKAATQCEFTRDEF 120

Query: 273 MNGMLEL 279
           +NGM EL
Sbjct: 121 VNGMTEL 127

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787464|gb|EFZ13552.1| hypothetical protein SINV_09204 [Solenopsis invicta]

 Score =  213 bits (543), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 116/127 (91%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HKLK SQ+DKVK+FI+FTQTGE TAI CL+QNDWKLDLASDNYFQNP AYYKE K+SVD+
Sbjct: 1   HKLKFSQRDKVKKFITFTQTGEQTAIYCLAQNDWKLDLASDNYFQNPEAYYKEPKNSVDK 60

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           KKLE LYSKY+D SEP+KI  +GIMKFLDDL+LSPESKLVLIIAW+F+A  QCEF+++EF
Sbjct: 61  KKLEILYSKYQDPSEPNKITADGIMKFLDDLNLSPESKLVLIIAWKFRAETQCEFTKEEF 120

Query: 273 MNGMLEL 279
           MNGM++L
Sbjct: 121 MNGMMDL 127

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373372|gb|AEE61827.1| unknown [Dendroctonus ponderosae]

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 101/127 (79%), Positives = 114/127 (89%), Gaps = 1/127 (0%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HKLKSSQ+DKVK+FISFTQTGE TAI CL+QNDWKLDLASDNYFQNP AYYKE +S +D+
Sbjct: 2   HKLKSSQRDKVKKFISFTQTGESTAIYCLTQNDWKLDLASDNYFQNPDAYYKETRS-IDK 60

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           KKLE LY +YKD +EPDKI V+GIMKFLDDL L PESKLVLI+AW+FKAA QCEFSRDEF
Sbjct: 61  KKLEILYIRYKDPNEPDKISVDGIMKFLDDLGLPPESKLVLIVAWKFKAATQCEFSRDEF 120

Query: 273 MNGMLEL 279
           +NGM +L
Sbjct: 121 INGMTDL 127

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492889|ref|XP_001601855.2| PREDICTED: DCN1-like protein-like [Nasonia vitripennis]

 Score =  213 bits (542), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 98/127 (77%), Positives = 114/127 (89%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HKLK SQ+DKVKRFI+FTQTGE TAI CL+QNDWKLDLASDNYFQNP AYYKE K++VD+
Sbjct: 2   HKLKFSQRDKVKRFITFTQTGEQTAIYCLAQNDWKLDLASDNYFQNPEAYYKEPKNAVDK 61

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           KKLE LYS+Y+D SEP+KI  +GIMKFLDDL L+PESKLVLIIAW+FKA  QCEF++DEF
Sbjct: 62  KKLEILYSRYQDPSEPEKITADGIMKFLDDLGLTPESKLVLIIAWKFKAETQCEFTKDEF 121

Query: 273 MNGMLEL 279
           +NGM +L
Sbjct: 122 INGMTDL 128

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346470365|gb|AEO35027.1| hypothetical protein [Amblyomma maculatum]

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/127 (76%), Positives = 114/127 (89%)

Query: 153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
           HKLKSSQ++KVK+FI+FTQTGE TAI CL+Q+DWKLD+ASDN+FQNP  YY+E K SVDR
Sbjct: 2   HKLKSSQREKVKQFIAFTQTGEKTAIYCLTQHDWKLDVASDNFFQNPDMYYREPKGSVDR 61

Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           KKLE L++KYKD  EPDK+ V+GI++FLDDL LSPESKLVLIIAW+FKA AQCEF+RDEF
Sbjct: 62  KKLEHLFNKYKDPHEPDKMTVDGIVRFLDDLGLSPESKLVLIIAWKFKAVAQCEFTRDEF 121

Query: 273 MNGMLEL 279
           MNGM EL
Sbjct: 122 MNGMAEL 128

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427796805|gb|JAA63854.1| Putative dcn1-like protein 1, partial [Rhipicephalus pulchellus]

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/140 (71%), Positives = 118/140 (84%), Gaps = 8/140 (5%)

Query: 148 CAMQD--------HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 199
           CA+Q         HKLKSSQK+KVK+FI+FTQTGE TAI CL+Q+DWKLD+ASDN+FQNP
Sbjct: 15  CALQAAESEWPKMHKLKSSQKEKVKQFIAFTQTGEKTAIYCLTQHDWKLDVASDNFFQNP 74

Query: 200 SAYYKEQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRF 259
             YY+E K SVDRKKLE L+++YKD  EPDK+ V+GI++FLDDL LSPESKLVLIIAW+F
Sbjct: 75  DMYYREPKGSVDRKKLEHLFNRYKDPHEPDKMTVDGIVRFLDDLGLSPESKLVLIIAWKF 134

Query: 260 KAAAQCEFSRDEFMNGMLEL 279
           KA AQCEF+RDEFMNGM EL
Sbjct: 135 KAVAQCEFTRDEFMNGMSEL 154

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380010988|ref|XP_003689597.1| PREDICTED: DCN1-like protein 1-like [Apis florea]

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 120/146 (82%), Gaps = 7/146 (4%)

Query: 134 ILAQGELKMLKEIECAMQDHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASD 193
           ILA G LK+ K        HKLK SQ+DKVK+FI+FT TGE TAI CL+QNDWKLDLASD
Sbjct: 14  ILAFGGLKLAKM-------HKLKFSQRDKVKKFITFTHTGEQTAIYCLAQNDWKLDLASD 66

Query: 194 NYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVL 253
           NYFQNP AY KE K++VD+KKLE L+S+Y+D +EPDKI  +GIMKFLDDL LSPESKLVL
Sbjct: 67  NYFQNPEAYCKEPKNTVDKKKLEILFSRYQDPNEPDKITADGIMKFLDDLDLSPESKLVL 126

Query: 254 IIAWRFKAAAQCEFSRDEFMNGMLEL 279
           IIAW+F+A  QCEF++DEFMNGM +L
Sbjct: 127 IIAWKFRAETQCEFTKDEFMNGMTDL 152

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202323|gb|EFN81781.1| DCN1-like protein 1 [Harpegnathos saltator]

 Score =  207 bits (527), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 97/126 (76%), Positives = 113/126 (89%)

Query: 154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRK 213
           KLK SQ+DKVK+FI+FTQTGE TAI CL+QNDWKLDLASDNYFQNP AY KE K+SVD+K
Sbjct: 1   KLKFSQRDKVKKFITFTQTGEQTAIYCLAQNDWKLDLASDNYFQNPEAYCKEPKNSVDKK 60

Query: 214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFM 273
           KLE LYS+Y+D SEP+KI  +GIMKFLDDL LSPESKLVLIIAW+F+A  QCEF++DEFM
Sbjct: 61  KLEILYSRYQDPSEPNKITADGIMKFLDDLGLSPESKLVLIIAWKFRAETQCEFTKDEFM 120

Query: 274 NGMLEL 279
           NGM++L
Sbjct: 121 NGMMDL 126

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	279
UNIPROTKB|E2QV42	262	DCUN1D1 "Uncharacterized prote	0.458	0.488	0.627	1.7e-41
UNIPROTKB|Q96GG9	259	DCUN1D1 "DCN1-like protein 1"	0.455	0.490	0.632	2.8e-41
UNIPROTKB|I3L7H0	259	DCUN1D1 "Uncharacterized prote	0.455	0.490	0.632	2.8e-41
UNIPROTKB|F1NPG9	258	DCUN1D1 "DCN1-like protein 1"	0.455	0.492	0.632	5.9e-41
UNIPROTKB|Q5ZKU1	259	DCUN1D1 "DCN1-like protein 1"	0.455	0.490	0.632	5.9e-41
MGI|MGI:2142792	259	Dcun1d2 "DCN1, defective in cu	0.455	0.490	0.617	6.8e-40
ZFIN|ZDB-GENE-030131-5443	282	dcun1d1 "DCN1, defective in cu	0.451	0.446	0.603	8.7e-40
UNIPROTKB|F1MDM6	244	DCUN1D1 "Uncharacterized prote	0.397	0.454	0.633	1.2e-35
TAIR|locus:2087720	250	AT3G12760 "AT3G12760" [Arabido	0.437	0.488	0.362	1.3e-20
WB|WBGene00010428	295	dcn-1 [Caenorhabditis elegans	0.455	0.430	0.366	5.7e-20

UNIPROTKB|E2QV42 DCUN1D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 81/129 (62%), Positives = 106/129 (82%)

Query:   152 DHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSV 210
             ++KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+
Sbjct:     4 ENKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 63

Query:   211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRD 270
             DRKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ 
Sbjct:    64 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 123

Query:   271 EFMNGMLEL 279
             EFM+GM EL
Sbjct:   124 EFMDGMTEL 132

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q96GG9 DCUN1D1 "DCN1-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 81/128 (63%), Positives = 105/128 (82%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
             +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct:     2 NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 61

Query:   212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
             RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct:    62 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 121

Query:   272 FMNGMLEL 279
             FM+GM EL
Sbjct:   122 FMDGMTEL 129

GO:0008150 "biological_process" evidence=ND

GO:0000151 "ubiquitin ligase complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L7H0 DCUN1D1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 81/128 (63%), Positives = 105/128 (82%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
             +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct:     2 NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 61

Query:   212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
             RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct:    62 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 121

Query:   272 FMNGMLEL 279
             FM+GM EL
Sbjct:   122 FMDGMTEL 129

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1NPG9 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 81/128 (63%), Positives = 105/128 (82%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
             +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct:     1 NKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 60

Query:   212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
             RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct:    61 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLE 120

Query:   272 FMNGMLEL 279
             FM+GM EL
Sbjct:   121 FMDGMTEL 128

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q5ZKU1 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 81/128 (63%), Positives = 105/128 (82%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
             +KLKSSQKDKV++F+ FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+D
Sbjct:     2 NKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 61

Query:   212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
             RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct:    62 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLE 121

Query:   272 FMNGMLEL 279
             FM+GM EL
Sbjct:   122 FMDGMTEL 129

GO:0000151 "ubiquitin ligase complex" evidence=IEA

MGI|MGI:2142792 Dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 79/128 (61%), Positives = 105/128 (82%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVD 211
             HKLKS+QKDKV++F++ TQ  E TAI CL+QN+WKLD A+D++FQNP A+++E  KSSVD
Sbjct:     2 HKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVD 61

Query:   212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
             +KKLE LYS+YKD  + +KI ++GI +F DDLSL P S  VL+IAW+F+AA QCEFS+ E
Sbjct:    62 QKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKE 121

Query:   272 FMNGMLEL 279
             F++GM EL
Sbjct:   122 FVDGMTEL 129

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-5443 dcun1d1 "DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 76/126 (60%), Positives = 101/126 (80%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
             +KLKSSQKDKV++F+ FTQ+ E TA+NCLSQNDWKLD+A+DN+FQ+P  Y +  K ++DR
Sbjct:    27 NKLKSSQKDKVRQFMIFTQSNEKTALNCLSQNDWKLDVATDNFFQHPDLYVQNLKGTLDR 86

Query:   213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
             KKLE LY++Y+D  + +KI ++GI +F DDL L P S  VL+IAW+F+AA QCEFS+ EF
Sbjct:    87 KKLEQLYNRYRDPQDDNKIGIDGIQQFCDDLGLDPASISVLLIAWKFRAATQCEFSKQEF 146

Query:   273 MNGMLE 278
             M GM E
Sbjct:   147 MEGMAE 152

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1MDM6 DCUN1D1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 71/112 (63%), Positives = 90/112 (80%)

Query:   169 FTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQ-KSSVDRKKLESLYSKYKDASE 227
             FTQ+ E TA++CLSQNDWKLD+A+DN+FQNP  Y +E  K S+DRKKLE LYS+YKD  +
Sbjct:     3 FTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYSRYKDPQD 62

Query:   228 PDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 279
              +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ EFM+GM EL
Sbjct:    63 ENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTEL 114

GO:0000151 "ubiquitin ligase complex" evidence=IEA

TAIR|locus:2087720 AT3G12760 "AT3G12760" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 46/127 (36%), Positives = 76/127 (59%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDR 212
             HKL  S +DK+++F++ T   E  A+  L  +DW L+ A D ++  P    + + ++ + 
Sbjct:     2 HKLSRSNRDKLQQFVAITGASEKNALQALKASDWHLEAAFDVFYSQP----QPRSNAAEV 57

Query:   213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
             ++LE LY++YKD    D IL EGI    +DL + P+  + L+++W   AA  CEFSR EF
Sbjct:    58 RRLEELYNRYKDPYS-DMILAEGISVLCNDLEVEPQDIVTLVLSWHMNAATACEFSRQEF 116

Query:   273 MNGMLEL 279
             ++G+  L
Sbjct:   117 ISGLQAL 123

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

WB|WBGene00010428 dcn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 48/131 (36%), Positives = 79/131 (60%)

Query:   153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYY-KEQKSSVD 211
             ++LKS QK K+++F+ +TQ  E  ++N L++ +W ++ A   YF NP+ +     + SVD
Sbjct:     2 NRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSVD 61

Query:   212 RKKLESLYSKYKDASEP--DKIL-VEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFS 268
             R  +E L+++Y D  +   +K +   GI + L DL      + VL++AW+F A  QCEFS
Sbjct:    62 RSNIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEFS 121

Query:   269 RDEFMNGMLEL 279
              DE++ GM  L
Sbjct:   122 LDEWVKGMTAL 132

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0045116 "protein neddylation" evidence=IMP

GO:0044254 "multicellular organismal protein catabolic process" evidence=IGI;IMP

GO:0030953 "astral microtubule organization" evidence=IMP

GO:0040001 "establishment of mitotic spindle localization" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QZ73	DCNL1_MOUSE	No assigned EC number	0.6328	0.4551	0.4903	yes	N/A
Q96GG9	DCNL1_HUMAN	No assigned EC number	0.6328	0.4551	0.4903	yes	N/A
Q9VUQ8	DCN1L_DROME	No assigned EC number	0.6377	0.4372	0.4236	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	279
KOG3077|consensus	260		99.94
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	99.28
smart00804	63	TAP_C C-terminal domain of vertebrate Tap protein.	97.4
PF03943	51	TAP_C: TAP C-terminal domain; InterPro: IPR005637	97.36
KOG1364|consensus	356		96.43
PF00627	37	UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma	95.78
PTZ00184	149	calmodulin; Provisional	94.15
smart00165	37	UBA Ubiquitin associated domain. Present in Rad23,	93.97
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	93.68
cd00194	38	UBA Ubiquitin Associated domain. The UBA domain is	93.5
PTZ00183	158	centrin; Provisional	91.78
cd00052	67	EH Eps15 homology domain; found in proteins implic	91.32
KOG2086|consensus	380		91.3
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	90.9
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	90.23
PF05859	144	Mis12: Mis12 protein; InterPro: IPR008685 Kinetoch	88.79
PTZ00184	149	calmodulin; Provisional	87.45
KOG3763|consensus	585		85.54
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	85.1
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	84.63
PRK06369	115	nac nascent polypeptide-associated complex protein	84.56
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	84.12
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	80.69
PTZ00183	158	centrin; Provisional	80.02

>KOG3077|consensus

Probab=99.94  E-value=1.1e-27  Score=219.95  Aligned_cols=128  Identities=45%  Similarity=0.831  Sum_probs=117.4

Q ss_pred             cccCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhh-ccccccCCcccccc-cCCccCHHHHHHHHHHhcCCCCCC
Q psy9057         152 DHKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLA-SDNYFQNPSAYYKE-QKSSVDRKKLESLYSKYKDASEPD  229 (279)
Q Consensus       152 m~kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~A-vdaFF~nP~~~~~s-s~~s~~~kkLeaLFDkYkDpddpD  229 (279)
                      |++|+..++.++++|+.+|+++++++..+|.+++|++..| .+.||.+|...... ..+.++.+.+.++|.+|+||++++
T Consensus         1 mnklk~~~~d~~~~~~~~~~~~~~~s~~~~~~~dw~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~l~~~f~~y~d~~d~~   80 (260)
T KOG3077|consen    1 MNKLKSSQKDKFEQFMSFTASRKKTSLSCLAACDWNLKYAFNDSYYTNPQSLREESVQARVSEKRLEELFNQYKDPDDDN   80 (260)
T ss_pred             CCccchhHHHHHHhhcccccccchhhhhhhcccccccchhcccchhcchhHHHHhhhhccccHHHHHHHHHHhcCccccc
Confidence            7888889999999999999999999999999999999999 67777777654433 256778999999999999999888


Q ss_pred             ccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         230 KILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       230 ~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      .||+||+.+||+||||+|+|+++|||||+|+|++||+|||++|+.||.+|
T Consensus        81 ~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~A~~m~~Fsr~ef~~g~~~l  130 (260)
T KOG3077|consen   81 LIGPDGIEKFCEDLGVEPEDISVLVLAWKLGAATMCEFSREEFLKGMTAL  130 (260)
T ss_pred             ccChHHHHHHHHHhCCCchhHHHHHHHHHhccchhhhhhHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999875

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=99.28  E-value=2.5e-12  Score=88.57  Aligned_cols=41  Identities=34%  Similarity=0.665  Sum_probs=36.3

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      +++|++||+|||+++.+|++||++++|||+.|++.||+++.
T Consensus         1 ~e~i~~F~~iTg~~~~~A~~~L~~~~wdle~Av~~y~~~~~   41 (43)
T PF14555_consen    1 DEKIAQFMSITGADEDVAIQYLEANNWDLEAAVNAYFDDGE   41 (43)
T ss_dssp             HHHHHHHHHHH-SSHHHHHHHHHHTTT-HHHHHHHHHHSS-
T ss_pred             CHHHHHHHHHHCcCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999999875

>smart00804 TAP_C C-terminal domain of vertebrate Tap protein

Probab=97.40  E-value=0.00016  Score=54.49  Aligned_cols=44  Identities=25%  Similarity=0.447  Sum_probs=40.9

Q ss_pred             cCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccccc
Q psy9057         154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       154 kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      .++..|.++|.+|+..||.+.+=+..||+.++||++.|+..|-.
T Consensus         7 ~~~~~q~~~v~~~~~~Tgmn~~~s~~cLe~~~Wd~~~Al~~F~~   50 (63)
T smart00804        7 TLSPEQQEMVQAFSAQTGMNAEYSQMCLEDNNWDYERALKNFTE   50 (63)
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            46677889999999999999999999999999999999999975

The vertebrate Tap protein is a member of the NXF family of shuttling transport receptors for the nuclear export of mRNA. Its most C-terminal domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate shuttling. This domain forms a compact four-helix fold related to that of a UBA domain.

>PF03943 TAP_C: TAP C-terminal domain; InterPro: IPR005637 This entry contains the NXF family of shuttling transport receptors for nuclear export of mRNA, which include: vertebrate mRNA export factor TAP or nuclear RNA export factor 1 (NXF1)

Probab=97.36  E-value=0.0001  Score=53.24  Aligned_cols=39  Identities=23%  Similarity=0.391  Sum_probs=34.6

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ++|.+|+..||.+.+-|..||+.++||++.|+..|-...
T Consensus         2 ~mv~~~s~~Tgmn~~~s~~CL~~n~Wd~~~A~~~F~~l~   40 (51)
T PF03943_consen    2 EMVQQFSQQTGMNLEWSQKCLEENNWDYERALQNFEELK   40 (51)
T ss_dssp             HHHHHHHHHCSS-CCHHHHHHHHTTT-CCHHHHHHHHCC
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999999998654

Caenorhabditis elegans nuclear RNA export factor 1 (nxf-1). yeast mRNA export factor MEX67. Members of the NXF family have a modular structure. A nuclear localization sequence and a noncanonical RNA recognition motif (RRM) (see PDOC00030 from PROSITEDOC) followed by four LRR repeats are located in its N-terminal half. The C-terminal half contains a NTF2 domain (see PDOC50177 from PROSITEDOC) followed by a second domain, TAP-C. The TAP-C domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate nuclear shuttling [,]. The Tap-C domain is made of four alpha helices packed against each other. The arrangement of helices 1, 2 and 3 is similar to that seen in a UBA fold. and is joined to the next module by flexible 12-residue Pro-rich linker [, ].; GO: 0051028 mRNA transport, 0005634 nucleus; PDB: 1OAI_A 1GO5_A 2KHH_A 2JP7_A.

>KOG1364|consensus

Probab=96.43  E-value=0.0021  Score=62.68  Aligned_cols=44  Identities=27%  Similarity=0.479  Sum_probs=40.0

Q ss_pred             CcchHHHHHHHHhhhC-CCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         156 KSSQKDKVKRFISFTQ-TGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       156 ss~QkelVrQF~sITG-ASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ..+++++|.+|+.||+ .+...|++||++.+|+++.|++-||.+.
T Consensus         3 ~~~~~~lv~~fl~It~~~t~e~A~q~L~~~~~~le~ai~Lffe~~   47 (356)
T KOG1364|consen    3 TGAQRALVSKFLAITVQQTVEIATQYLSAADWDLEAAINLFFEHG   47 (356)
T ss_pred             cchHHHHHHHHHHHhccccHHHHHHHHHhcCCcHHHHHHHHHHhc
Confidence            3467899999999999 8999999999999999999999999764

>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []

Probab=95.78  E-value=0.015  Score=38.69  Aligned_cols=33  Identities=18%  Similarity=0.256  Sum_probs=29.9

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASD  193 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~Avd  193 (279)
                      .+.|++.+++ |.++..|++.|..++||++.|++
T Consensus         3 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~nve~A~~   35 (37)
T PF00627_consen    3 EEKVQQLMEM-GFSREQAREALRACNGNVERAVD   35 (37)
T ss_dssp             HHHHHHHHHH-TS-HHHHHHHHHHTTTSHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHH
Confidence            4679999999 99999999999999999999986

The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....

>PTZ00184 calmodulin; Provisional

Probab=94.15  E-value=2.1  Score=33.46  Aligned_cols=65  Identities=11%  Similarity=0.187  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..| |.+..+.|+.+.+.++|..+|+.+.+..+-.+...+....-|.|+.++|+..+.
T Consensus        83 ~~~~~~~F~~~-D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184         83 EEEIKEAFKVF-DRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHHHHhh-CCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            45788899888 444457899999999999999888776666666666666679999999998764

>smart00165 UBA Ubiquitin associated domain

Probab=93.97  E-value=0.084  Score=34.44  Aligned_cols=34  Identities=12%  Similarity=0.290  Sum_probs=29.6

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDN  194 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~Avda  194 (279)
                      .+.|++++++ |.++..|+..|.+++||++.|++-
T Consensus         2 ~~~v~~L~~m-Gf~~~~a~~aL~~~~~d~~~A~~~   35 (37)
T smart00165        2 EEKIDQLLEM-GFSREEALKALRAANGNVERAAEY   35 (37)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHH
Confidence            3567788877 999999999999999999999864

Present in Rad23, SNF1-like kinases. The newly-found UBA in p62 is known to bind ubiquitin.

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=93.68  E-value=0.49  Score=30.60  Aligned_cols=61  Identities=11%  Similarity=0.162  Sum_probs=50.2

Q ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         215 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       215 LeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      +..+|..|. ++..+.|..+-+...+..+|..+.+..+-.+...+....-|.++-++|+..+
T Consensus         2 ~~~~f~~~d-~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFD-KDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            456788774 4445789999999999999999988777778888888788999999998754

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>cd00194 UBA Ubiquitin Associated domain

Probab=93.50  E-value=0.11  Score=34.06  Aligned_cols=35  Identities=11%  Similarity=0.205  Sum_probs=29.9

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      +.|.+++++ |.++..|+..|..++||++.|++-.|
T Consensus         3 ~~v~~L~~m-Gf~~~~~~~AL~~~~~d~~~A~~~L~   37 (38)
T cd00194           3 EKLEQLLEM-GFSREEARKALRATNNNVERAVEWLL   37 (38)
T ss_pred             HHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            467777774 99999999999999999999987544

The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.

>PTZ00183 centrin; Provisional

Probab=91.78  E-value=1.2  Score=35.48  Aligned_cols=66  Identities=15%  Similarity=0.228  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.++.+.|+.+.+..+|..+|..+.+-.+-.+...+....-|.|+.++|+..+..
T Consensus        89 ~~~l~~~F~~~-D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         89 REEILKAFRLF-DDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            46788999876 5445578999999999999998887766666667777677799999999998753

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=91.32  E-value=1.2  Score=30.88  Aligned_cols=58  Identities=16%  Similarity=0.142  Sum_probs=43.3

Q ss_pred             HHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         217 SLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       217 aLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ++|..| |++..+.|+.+.+.+++..+|++.+.+.-  +...+....-|.|+.++|+..|.
T Consensus         3 ~~F~~~-D~~~~G~i~~~el~~~l~~~g~~~~~~~~--i~~~~d~~~~g~i~~~ef~~~~~   60 (67)
T cd00052           3 QIFRSL-DPDGDGLISGDEARPFLGKSGLPRSVLAQ--IWDLADTDKDGKLDKEEFAIAMH   60 (67)
T ss_pred             HHHHHh-CCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHhcCCCCCcCCHHHHHHHHH
Confidence            467776 44445789999999999999984444333  33456667789999999999885

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG2086|consensus

Probab=91.30  E-value=0.071  Score=52.67  Aligned_cols=40  Identities=20%  Similarity=0.223  Sum_probs=37.0

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      ..+.+++|+.+||.++..|+.||...+|+++.|...++..
T Consensus         4 p~~~ls~f~~~t~~se~~~~~~l~s~~~d~~~a~~~~~~~   43 (380)
T KOG2086|consen    4 PLDSLSEFRAVTGPSESRARFYLESIYWDREAAHRSELEA   43 (380)
T ss_pred             chhHHHHHhccCCCCccccccccccCCCchhhhhhhhccc
Confidence            3567999999999999999999999999999999999865

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=90.90  E-value=0.44  Score=32.70  Aligned_cols=50  Identities=24%  Similarity=0.231  Sum_probs=46.1

Q ss_pred             CccCHHHHHHHHhhcCCC-CCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         229 DKILVEGIMKFLDDLSLS-PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       229 D~IgiDGiirlcEDLGVd-PEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      +.|+.+.+...+..+|+. +.+-.+=.|-+.+-...-|.|+.+||+..|..
T Consensus         3 G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    3 GKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            579999999999989999 98888999999999999999999999999875

...

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=90.23  E-value=1.3  Score=34.18  Aligned_cols=66  Identities=12%  Similarity=0.198  Sum_probs=50.7

Q ss_pred             HHHHHHHHHhcCCC-CCCccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDAS-EPDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpd-dpD~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..+...|..|-+.+ +.+.|+.+-+..++..     +|..+....+--+...+....-|.|+-++|+..|..
T Consensus         8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~   79 (94)
T cd05031           8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG   79 (94)
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            45677788886533 2478999999998876     677877666666666778888899999999987754

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>PF05859 Mis12: Mis12 protein; InterPro: IPR008685 Kinetochores are the chromosomal sites for spindle interaction and play a vital role for chromosome segregation

Probab=88.79  E-value=2.2  Score=36.03  Aligned_cols=90  Identities=19%  Similarity=0.416  Sum_probs=65.7

Q ss_pred             eeeeecccchhhhHHHHHHHHHhhhhHHHHHHHHHHhhhh-------hHhhhHHHHHHHHhHHHhhhccCCchhhhhh-c
Q psy9057          14 VKFFGYSTLTVQQDFERKLISLLNSNIKALQKKLSEKCKT-------DQHKQNLEKCMQKFKDTFQNNLKGPLEEFNT-S   85 (279)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   85 (279)
                      .-||||...++-.|.-...-.++..-+.++.+.|.+.-..       .+..+.+++|+.|+..-++..+.--+..|-. .
T Consensus         3 te~fgf~P~~~iDdIiNavnd~l~~~~~~~E~~l~~~~~~~~~~~~~~~~~~ei~~G~~kletlle~~~Dk~fdkfE~y~   82 (144)
T PF05859_consen    3 TEHFGFTPQSFIDDIINAVNDILYDAFDAVEEYLLERLPSKLGSEDYPERSEEIEKGTHKLETLLESRVDKNFDKFELYC   82 (144)
T ss_pred             hHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4589999998888777666667777778888888776654       1223889999999988777777655555532 4


Q ss_pred             HHHHHhhcccccCCchhhh
Q psy9057          86 ISELFKIAPHVLFPEDEVY  104 (279)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~  104 (279)
                      +.-.|.|. ++|.|+|.+-
T Consensus        83 Lrnif~IP-~~llp~~~~~  100 (144)
T PF05859_consen   83 LRNIFSIP-EDLLPEDWIR  100 (144)
T ss_pred             HhccccCC-hhhcchhhhc
Confidence            66778886 7777987764

Fission Saccharomyces cerevisiae kinetochore protein Mis12, is required for correct spindle morphogenesis, determining metaphase spindle length []. Thirty-five to sixty percent extension of metaphase spindle length takes place in Mis12 mutants []. It has been shown that Mis12 might genetically interact with Mal2p [].; GO: 0007049 cell cycle, 0007067 mitosis, 0000775 chromosome, centromeric region, 0005634 nucleus

>PTZ00184 calmodulin; Provisional

Probab=87.45  E-value=3.6  Score=32.09  Aligned_cols=63  Identities=14%  Similarity=0.207  Sum_probs=33.2

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      +.+...|..+ |++..+.|+.+....++..+|.+|.+..+-.+.-.+....-|.++.++|+..|
T Consensus        11 ~~~~~~F~~~-D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l   73 (149)
T PTZ00184         11 AEFKEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLM   73 (149)
T ss_pred             HHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHH
Confidence            3444455443 33333456666666666666665555444444444544455666666666544

>KOG3763|consensus

Probab=85.54  E-value=0.72  Score=47.94  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=37.3

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      .++|--|+..||...+=+..||+.++||.+.|+..|-+...
T Consensus       536 ~e~l~~~~~~tGln~~~s~~c~e~~nWdy~~A~k~F~~~ks  576 (585)
T KOG3763|consen  536 DEKLLKFQEETGLNSEWSTMCLEQNNWDYERALKLFIELKS  576 (585)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHccCCHHHHHHHHHHhhc
Confidence            56788999999999999999999999999999999986543

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=85.10  E-value=4.1  Score=31.77  Aligned_cols=66  Identities=8%  Similarity=0.165  Sum_probs=50.6

Q ss_pred             HHHHHHHHHhcCCC-CCCccCHHHHHHHHhh---cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDAS-EPDKILVEGIMKFLDD---LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpd-dpD~IgiDGiirlcED---LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..|.++|.+|...+ +.+.|+.+.+.+++..   +|..+.+-.+--+-..+....-|.|+-++|+.=|..
T Consensus        10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029          10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            35778999998633 3579999999999974   787776665555666677778899999999875543

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>TIGR00264 alpha-NAC-related protein

Probab=84.63  E-value=1.3  Score=37.64  Aligned_cols=33  Identities=15%  Similarity=0.066  Sum_probs=29.4

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcc
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDWKLDLASD  193 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanWdLE~Avd  193 (279)
                      +-|.-.++-||+|.+.|+..|+.+|||+-.|+-
T Consensus        80 eDI~lV~eq~gvs~e~A~~AL~~~~gDl~~AI~  112 (116)
T TIGR00264        80 DDIELVMKQCNVSKEEARRALEECGGDLAEAIM  112 (116)
T ss_pred             HHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHH
Confidence            457777889999999999999999999999874

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=84.56  E-value=1.3  Score=37.47  Aligned_cols=34  Identities=18%  Similarity=0.092  Sum_probs=30.5

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASD  193 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~Avd  193 (279)
                      .+-|.-.++-||+|.+.|+..|+.+|||+-.|+-
T Consensus        77 ~edI~lv~~q~gvs~~~A~~AL~~~~gDl~~AI~  110 (115)
T PRK06369         77 EEDIELVAEQTGVSEEEARKALEEANGDLAEAIL  110 (115)
T ss_pred             HHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHH
Confidence            3557778899999999999999999999999975

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=84.12  E-value=3.3  Score=31.96  Aligned_cols=66  Identities=14%  Similarity=0.268  Sum_probs=47.1

Q ss_pred             HHHHHHHHHhcCCC-CCCccCHHHHHHHHh-hcCCCCC----cHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDAS-EPDKILVEGIMKFLD-DLSLSPE----SKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpd-dpD~IgiDGiirlcE-DLGVdPE----Dvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..|..+|.+|...+ +.+.|+.+.+..++. .+|-.+.    +..+--+-..+....-|.|+-++|+..+..
T Consensus         8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~   79 (88)
T cd05030           8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK   79 (88)
T ss_pred             HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            35778899999764 357899999999997 4443332    333334444556667799999999988764

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>smart00027 EH Eps15 homology domain

Probab=80.69  E-value=5.5  Score=30.66  Aligned_cols=64  Identities=14%  Similarity=0.118  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      .+.+...|..|- .+..+.|+.+.+.+++..+|++.+.+.-+.  -.+....-|.|+.++|+..|..
T Consensus         9 ~~~l~~~F~~~D-~d~~G~Is~~el~~~l~~~~~~~~ev~~i~--~~~d~~~~g~I~~~eF~~~~~~   72 (96)
T smart00027        9 KAKYEQIFRSLD-KNQDGTVTGAQAKPILLKSGLPQTLLAKIW--NLADIDNDGELDKDEFALAMHL   72 (96)
T ss_pred             HHHHHHHHHHhC-CCCCCeEeHHHHHHHHHHcCCCHHHHHHHH--HHhcCCCCCCcCHHHHHHHHHH
Confidence            456777888764 333478999999999999998766555433  2345566799999999998753

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PTZ00183 centrin; Provisional

Probab=80.02  E-value=14  Score=29.40  Aligned_cols=63  Identities=13%  Similarity=0.249  Sum_probs=34.4

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      +++..+|..+ |++....|+.+-+..++..+|..+....+-.+--.+....-|.++.++|+..+
T Consensus        17 ~~~~~~F~~~-D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   79 (158)
T PTZ00183         17 KEIREAFDLF-DTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIM   79 (158)
T ss_pred             HHHHHHHHHh-CCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            3455555443 33334566666666666666665554444444444444555666666666554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	279
3tdu_A	200	N-Terminal Acetylation Acts As An Avidity Enhancer		2e-19
4gao_A	200	Dcnl Complex With N-terminally Acetylated Nedd8 E2		5e-19
4gba_A	221	Dcnl Complex With N-terminally Acetylated Nedd8 E2		7e-11
3kev_A	199	X-Ray Crystal Structure Of A Dcun1 Domain-Containin		5e-06

>pdb|3TDU|A Chain A, N-Terminal Acetylation Acts As An Avidity Enhancer Within An Interconnected Multiprotein Complex: Structure Of A Human Cul1whb- Dcn1p-Acetylated Ubc12n Complex Length = 200

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct: 3   RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 62
Query: 272 FMNGMLEL 279
           FM+GM EL
Sbjct: 63  FMDGMTEL 70

>pdb|4GAO|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 200

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)
Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           +KKLE LY +YKD  + +KI V+GI +F DDLSL P S  VL+IAW+F+AA QCEFSR E
Sbjct: 3   KKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKE 62
Query: 272 FMNGMLEL 279
           F++GM EL
Sbjct: 63  FLDGMTEL 70

>pdb|4GBA|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 221

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEF 272
           ++LE L+ +YKD  E D IL EG+ +F +DL + P    VL++AW+F+AA  C+F+R EF
Sbjct: 6   QRLEELFRRYKDERE-DAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEF 64
Query: 273 MNG 275
            +G
Sbjct: 65  FDG 67

>pdb|3KEV|A Chain A, X-Ray Crystal Structure Of A Dcun1 Domain-Containing Protein From Galdieria Sulfuraria Length = 199

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 210 VDRKKLESLYSKYKDASEP--DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEF 267
            D+K +  L+  YK   EP  + I  EG+ +  +D+ + P   + L++AW+ KA++  EF
Sbjct: 4   ADKKAILELFQTYK---EPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTXEF 60
Query: 268 SRDEFMNGMLEL 279
           S  EF+ G+  L
Sbjct: 61  SEKEFVEGLANL 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	279
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	4e-25
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	7e-20
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	1e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	5e-04

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A Length = 200

 Score = 84.3 bits (208), Expect = 7e-20
 Identities = 42/68 (61%), Positives = 54/68 (79%)

Query: 212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDE 271
           RKKLE LY++YKD  + +KI ++GI +F DDL+L P S  VLIIAW+F+AA QCEFS+ E
Sbjct: 3   RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 62

Query: 272 FMNGMLEL 279
           FM+GM EL
Sbjct: 63  FMDGMTEL 70

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria} Length = 199

 Score = 80.8 bits (199), Expect = 1e-18
 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 208 SSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEF 267
              D+K +  L+  YK+    + I  EG+ +  +D+ + P   + L++AW+ KA++ CEF
Sbjct: 2   KRADKKAILELFQTYKE-PLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEF 60

Query: 268 SRDEFMNGMLE 278
           S  EF+ G+  
Sbjct: 61  SEKEFVEGLAN 71

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 7e-08
 Identities = 33/291 (11%), Positives = 73/291 (25%), Gaps = 97/291 (33%)

Query: 17  FGYSTLTVQ--QDFERKLISLLNSNIKALQKKLSEKCKTD---QHKQNLEKCMQKFKDTF 71
            G + + +     +  K+   ++  I  L   L      +   +  Q L    Q   +  
Sbjct: 161 SGKTWVALDVCLSY--KVQCKMDFKIFWL--NLKNCNSPETVLEMLQKL--LYQIDPNWT 214

Query: 72  QN-----NLKGPLEEFNTSISELFKIAPH-----VLFPEDEVY----------------- 104
                  N+K  +      +  L K  P+     VL     V                  
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---LNVQNAKAWNAFNLSCKILLT 271

Query: 105 -RNYS----EDSSNNIDEEVKELENNYRKTQLLTILAQ---GELKMLKEIECA------- 149
            R         ++      +          ++ ++L +      + L             
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331

Query: 150 -----MQDHK-----LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 199
                ++D        K    DK+   I        +++N L   +++            
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIE-------SSLNVLEPAEYR------------ 372

Query: 200 SAYYKE----QKSS-VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL 245
              +        S+ +    L  ++       +  K  V  ++  L   SL
Sbjct: 373 -KMFDRLSVFPPSAHIPTILLSLIW------FDVIKSDVMVVVNKLHKYSL 416

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 5e-07
 Identities = 51/337 (15%), Positives = 100/337 (29%), Gaps = 103/337 (30%)

Query: 20  STLTVQQDFERKLISLLNSNIKALQKKLSEKCK---TDQHKQNLEKCM-QKFKDTFQNNL 75
             L   + +E  L+ LLN          +  CK   T + KQ  +            ++ 
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 76  KGPLEE----------FNTSISEL----FKIAPHV--LFPE---DEV-----YRNYSEDS 111
              L             +    +L        P    +  E   D +     +++ + D 
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 112 SNN-IDEEVKELE-NNYRKT-QLLTILAQGE------LKML----KEIECAMQDHKL-KS 157
               I+  +  LE   YRK    L++           L ++     + +  +  +KL K 
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 158 S--QKDKVKRFISF--------TQTGELTAIN-----------CLSQNDWKLDLASDNYF 196
           S  +K   +  IS          +     A++               +D  +    D YF
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD-LIPPYLDQYF 473

Query: 197 QNPSAYY-----KEQKSSVDRK----------KLES-------------------LYSKY 222
            +   ++       ++ ++ R           K+                      Y  Y
Sbjct: 474 YSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533

Query: 223 KDASEPD-KILVEGIMKFL----DDLSLSPESKLVLI 254
              ++P  + LV  I+ FL    ++L  S  + L+ I
Sbjct: 534 ICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-05
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 23/166 (13%)

Query: 95  HVLFPEDEVYRNYSEDSSNNIDEEVKELENNYRKTQLLTILAQGELK-MLKEIECAMQDH 153
           H+ F   E    Y +  S   D  V   +    +    +IL++ E+  ++   +      
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 154 KL----KSSQKDKVKRFISFTQTGELTAINCLSQN-DWKLDLASDNYFQNPSAYYKEQKS 208
           +L     S Q++ V++F+             L  N  + +        Q PS   +    
Sbjct: 66  RLFWTLLSKQEEMVQKFVE----------EVLRINYKFLMSPIKTEQRQ-PSMMTRMYIE 114

Query: 209 SVDR-KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVL 253
             DR      +++KY + S     L   + + L  L L P   +++
Sbjct: 115 QRDRLYNDNQVFAKY-NVSRLQPYLK--LRQAL--LELRPAKNVLI 155

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 15/130 (11%), Positives = 44/130 (33%), Gaps = 20/130 (15%)

Query: 3   DTSKLSESEYSVKFFGYSTLTVQQDFERKLISLLNSNIKALQKKL---SEKCKTDQHKQN 59
           D       +Y     G+    ++      L  ++  + + L++K+   S          N
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522

Query: 60  LEKCMQKFKDTFQNN------LKGPLEEFNTSISELFKIAPH-------VLFPEDEVYRN 106
             + ++ +K    +N      L   + +F   I E    + +       ++  ++ ++  
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF-- 580

Query: 107 YSEDSSNNID 116
             E++   + 
Sbjct: 581 --EEAHKQVQ 588

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 8/23 (34%), Positives = 13/23 (56%), Gaps = 2/23 (8%)

Query: 206 QKSSVDRKKLESLYSKYKDASEP 228
           +K ++  KKL++    Y D S P
Sbjct: 18  EKQAL--KKLQASLKLYADDSAP 38

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	279
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	100.0
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	99.89
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	99.89
4gba_A	221	DCN1-like protein 3; E3 ligase, ligase-peptide com	99.87
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	99.25
2dam_A	67	ETEA protein; KIAA0887, UBA-like domain, structura	99.24
2dal_A	62	Protein KIAA0794; FAS associted factor 1, UBA-like	99.22
3e21_A	45	HFAF1, FAS-associated factor 1; UBA, alternative s	99.17
2dzl_A	66	Protein FAM100B; UBA-like domain, structural genom	99.05
2jp7_A	57	MRNA export factor MEX67; solution MEX67, UBA, tra	97.79
1oai_A	59	Nuclear RNA export factor; nuclear transport, nucl	97.72
4gew_A	362	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	97.28
1z96_A	40	DNA-damage, UBA-domain protein MUD1; ubiquitin, th	97.23
1wj7_A	104	Hypothetical protein (RSGI RUH-015); UBA domain, u	96.79
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	96.55
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	96.25
1jkg_B	250	TAP; NTF2-like domain, transport protein; 1.90A {H	96.07
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	95.91
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	95.9
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	95.81
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	95.58
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	95.45
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	95.41
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	95.34
2l2d_A	73	OTU domain-containing protein 7A; UBA fold, struct	95.15
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	94.97
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	94.84
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	94.81
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	94.81
1dv0_A	47	DNA repair protein HHR23A; helical bundle, DNA bin	94.76
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	94.64
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	94.54
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	94.52
3fwb_A	161	Cell division control protein 31; gene gating, com	94.5
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	94.48
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	94.42
1ify_A	49	HHR23A, UV excision repair protein RAD23 homolog A	94.35
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	94.34
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	94.28
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	94.27
3fwb_A	161	Cell division control protein 31; gene gating, com	94.27
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	94.25
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	94.23
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	94.2
2g3q_A	43	Protein YBL047C; endocytosis, solution structure,	94.18
1vg5_A	73	RSGI RUH-014, rhomboid family protein; UBA domain,	94.17
2jnf_A	158	Troponin C; stretch activated muscle contraction,	94.14
2jy5_A	52	Ubiquilin-1; UBA, alternative splicing, cytoplasm,	94.09
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	94.05
3li6_A	66	Calcium-binding protein; calcium signaling protein	94.0
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	93.96
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	93.91
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	93.85
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	93.79
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	93.6
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	93.6
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	93.59
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	93.55
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	93.51
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	93.4
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	93.39
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	93.32
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	93.3
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	93.27
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	93.26
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	93.17
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	93.15
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	93.13
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	93.11
2knz_A	53	Ubiquilin-4; cytoplasm, endoplasmic reticulum, nuc	93.07
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	93.04
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	93.01
1veg_A	83	NEDD8 ultimate buster-1; ubiquitin associated doma	92.92
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	92.8
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	92.79
2jnf_A	158	Troponin C; stretch activated muscle contraction,	92.77
2dkl_A	85	Trinucleotide repeat containing 6C protein; TNRC6C	92.73
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	92.66
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	92.65
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	92.63
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	92.61
2dah_A	54	Ubiquilin-3; UBA domain, structural genomics, NPPS	92.59
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	92.56
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	92.45
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	92.43
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	92.36
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	92.29
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	92.27
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	92.14
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	92.11
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	92.05
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	92.03
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	91.97
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	91.84
1wiv_A	73	UBP14, ubiquitin-specific protease 14; ubiquitin a	91.81
1wji_A	63	Tudor domain containing protein 3; UBA domain, str	91.78
2dak_A	63	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	91.68
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	91.67
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	91.59
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	91.56
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	91.52
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	91.49
2cp9_A	64	EF-TS, EF-TSMT, elongation factor TS, mitochondria	91.38
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	91.32
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	91.31
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	91.17
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	91.08
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	91.07
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	91.02
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	90.98
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	90.96
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	90.96
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	90.85
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	90.76
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	90.66
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	90.6
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	90.53
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	90.51
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	90.49
3k9o_A	201	Ubiquitin-conjugating enzyme E2 K; E2-25K, complex	90.45
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	90.17
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	90.12
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	90.05
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	89.8
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	89.59
1y1x_A	191	Leishmania major homolog of programmed cell death	89.59
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	89.53
1wr1_B	58	Ubiquitin-like protein DSK2; UBA domain, UBA-ubiqu	89.46
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	89.44
1c07_A	95	Protein (epidermal growth factor receptor pathway	89.32
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	89.31
2ekk_A	47	UBA domain from E3 ubiquitin-protein ligase HUWE1;	89.24
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	89.23
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	89.2
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	89.2
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	89.15
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	89.06
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	88.88
2wh0_Q	31	Pkcev3, protein kinase C epsilon type, NPKC-epsilo	88.85
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	88.79
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	88.73
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	88.69
1wgn_A	63	UBAP1, ubiquitin associated protein; ubiquitin ass	88.66
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	88.58
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	88.54
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	88.47
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	88.34
1y1x_A	191	Leishmania major homolog of programmed cell death	88.29
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	88.28
2bwb_A	46	Ubiquitin-like protein DSK2; UBA, signaling protei	88.22
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	88.13
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	88.13
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	88.13
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	88.09
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	87.93
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	87.86
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	87.8
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	87.71
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	87.68
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	87.53
1vej_A	74	Riken cDNA 4931431F19; UBA domain, three helix bun	87.24
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	87.02
2cwb_A	108	Chimera of immunoglobulin G binding protein G and	86.9
2dai_A	83	Ubadc1, ubiquitin associated domain containing 1;	86.88
3e46_A	253	Ubiquitin-conjugating enzyme E2-25 kDa; huntington	86.8
2cpw_A	64	CBL-interacting protein STS-1 variant; ubiquitin a	86.8
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	86.68
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	86.68
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	86.57
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	86.49
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	86.49
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	86.44
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	86.34
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	86.24
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	86.18
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	86.03
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	86.01
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	85.66
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	85.42
2qsf_X	171	RAD23, UV excision repair protein RAD23; alpha-bet	85.29
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	85.19
1otr_A	49	Protein CUE2; protein-protein complex, cell cycle;	85.07
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	85.04
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	84.94
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	84.93
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	84.78
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	84.29
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	84.25
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	84.02
1whc_A	64	RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain	83.96
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	83.86
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	83.62
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	83.46
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	83.3
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	83.16
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	83.11
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	83.1
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	83.05
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	83.01
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	82.95
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	82.74
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	82.66
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	82.44
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	82.36
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	82.06
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	81.93
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	81.28
2dag_A	74	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	81.21
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	81.14
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	80.81
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	80.56
2hps_A	186	Coelenterazine-binding protein with bound coelent;	80.35
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	80.2

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}

Probab=99.89  E-value=8.7e-24  Score=186.04  Aligned_cols=70  Identities=33%  Similarity=0.751  Sum_probs=66.4

Q ss_pred             ccCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         209 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       209 s~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ++++++|++||++|+||+++ .||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||++|
T Consensus         3 ~~~~~~l~~lF~~Y~d~~~~-~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l   72 (199)
T 3kev_A            3 RADKKAILELFQTYKEPLGN-YIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANL   72 (199)
T ss_dssp             -CCHHHHHHHHHHHCCTTSS-EECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHHHhcCCCcC-ccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHh
Confidence            56899999999999999865 99999999999999999999999999999999999999999999999875

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*

Probab=99.89  E-value=4.9e-24  Score=187.78  Aligned_cols=69  Identities=61%  Similarity=1.061  Sum_probs=66.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ++++|++||++|+||++||.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||++|
T Consensus         2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l   70 (200)
T 3tdu_A            2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTEL   70 (200)
T ss_dssp             CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHH
Confidence            578999999999999888999999999999999999999999999999999999999999999999864

>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}

Probab=99.87  E-value=3.6e-23  Score=184.94  Aligned_cols=70  Identities=41%  Similarity=0.837  Sum_probs=63.5

Q ss_pred             ccCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         209 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       209 s~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      +++.++|++||++|+|| ++|.||++|+++||+||||+|+|+++|||||+|+|++||+|||+||++||++|
T Consensus         2 ~~~~~~l~~lF~~Y~d~-~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l   71 (221)
T 4gba_A            2 SSSLQRLEELFRRYKDE-REDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAI   71 (221)
T ss_dssp             ----CHHHHHHHTTSCS-SSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCC-CCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHh
Confidence            44678999999999998 57899999999999999999999999999999999999999999999999864

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3

Probab=99.25  E-value=2.9e-12  Score=87.13  Aligned_cols=43  Identities=21%  Similarity=0.472  Sum_probs=40.6

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         157 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       157 s~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ++++++|.+|+++||+++..|++||++++|||+.|++.||++|
T Consensus         3 ~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~   45 (46)
T 1v92_A            3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence            4578899999999999999999999999999999999999876

>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.1e-12  Score=95.29  Aligned_cols=51  Identities=18%  Similarity=0.365  Sum_probs=47.6

Q ss_pred             hhcccCCcchHHHHHHHHhhhC-CCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         150 MQDHKLKSSQKDKVKRFISFTQ-TGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       150 ~~m~kLss~QkelVrQF~sITG-ASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      +.|++|+++++++|++|++||| +++.+|++||+.++|||+.||+.||+.+.
T Consensus         9 ~~~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~   60 (67)
T 2dam_A            9 PEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQE   60 (67)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSC
T ss_pred             cchhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            3568999999999999999999 99999999999999999999999998865

>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=5.4e-12  Score=92.38  Aligned_cols=48  Identities=17%  Similarity=0.264  Sum_probs=45.0

Q ss_pred             cCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCcc
Q psy9057         154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSA  201 (279)
Q Consensus       154 kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~~  201 (279)
                      .++..++++|.||++|||+++.+|++||+.++|||+.|++.||+.+..
T Consensus        10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~   57 (62)
T 2dal_A           10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGS   57 (62)
T ss_dssp             SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred             hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            578889999999999999999999999999999999999999998753

>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}

Probab=99.17  E-value=1.5e-11  Score=86.26  Aligned_cols=42  Identities=24%  Similarity=0.287  Sum_probs=37.2

Q ss_pred             CcchHHHHHHHHhhhCCCH-HHHHHHHHhCCCchhhhcccccc
Q psy9057         156 KSSQKDKVKRFISFTQTGE-LTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       156 ss~QkelVrQF~sITGASe-k~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      +.+++++|.+|+++||+++ .+|++||++|||||+.|+..||.
T Consensus         2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~   44 (45)
T 3e21_A            2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP   44 (45)
T ss_dssp             -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred             cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence            3568899999999999997 99999999999999999999995

>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=86.94  Aligned_cols=40  Identities=18%  Similarity=0.360  Sum_probs=38.6

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      ++|++|++|||+++.+|++||+.++|||+.|++.||++|.
T Consensus        19 ~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~   58 (66)
T 2dzl_A           19 VMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETN   58 (66)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence            7899999999999999999999999999999999998875

>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A

Probab=97.79  E-value=1.6e-05  Score=57.91  Aligned_cols=45  Identities=13%  Similarity=0.245  Sum_probs=42.3

Q ss_pred             cCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       154 kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      +|++.|.++|.+|+..||.+.+-+..||+.++||++.|+..|-..
T Consensus         1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~   45 (57)
T 2jp7_A            1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS   45 (57)
T ss_dssp             CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            478889999999999999999999999999999999999999764

>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3

Probab=97.72  E-value=2.3e-05  Score=57.15  Aligned_cols=43  Identities=16%  Similarity=0.390  Sum_probs=40.8

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccccc
Q psy9057         155 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       155 Lss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      |+..|.++|.+|+..||.+.+-+..||+.++||++.|+..|-.
T Consensus         3 ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~   45 (59)
T 1oai_A            3 LSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH   45 (59)
T ss_dssp             CCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            6788899999999999999999999999999999999999965

>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A

Probab=97.28  E-value=9.4e-05  Score=67.71  Aligned_cols=42  Identities=31%  Similarity=0.470  Sum_probs=38.3

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         158 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       158 ~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ...++.++|.+|||+++..|..||..++|+|+.|++.||..+
T Consensus        44 ~~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~   85 (362)
T 4gew_A           44 SDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGSE   85 (362)
T ss_dssp             CHHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred             chHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence            345789999999999999999999999999999999999553

>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1

Probab=97.23  E-value=0.00029  Score=45.85  Aligned_cols=39  Identities=21%  Similarity=0.309  Sum_probs=34.2

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         157 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       157 s~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      +...+.|++++++ |.++..|++.|..++||++.|++-.|
T Consensus         2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~   40 (40)
T 1z96_A            2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL   40 (40)
T ss_dssp             -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred             chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence            3456789999999 99999999999999999999997654

>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1

Probab=96.79  E-value=0.00093  Score=54.11  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=40.4

Q ss_pred             CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         156 KSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       156 ss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      .+..++.|+..+++||+++..|+..|..++||++.|++..+...
T Consensus        36 d~d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~   79 (104)
T 1wj7_A           36 DADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN   79 (104)
T ss_dssp             CHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             cccHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            45567899999999999999999999999999999999999775

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=96.55  E-value=0.0053  Score=41.23  Aligned_cols=68  Identities=10%  Similarity=0.157  Sum_probs=56.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ....+..+|..| |.+..+.|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.++|+..|..+
T Consensus         4 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~   71 (71)
T 2b1u_A            4 GLEDLQVAFRAF-DQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE   71 (71)
T ss_dssp             THHHHHHHHTTS-CCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTCC
T ss_pred             cHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhC
Confidence            467899999888 44445789999999999999998887777667777777778999999999988754

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=96.25  E-value=0.0065  Score=41.30  Aligned_cols=68  Identities=13%  Similarity=0.142  Sum_probs=53.4

Q ss_pred             CHHHHHHHHHHhcCCCCC-CccCHHHHHHHHhhcCCCC--CcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEP-DKILVEGIMKFLDDLSLSP--ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddp-D~IgiDGiirlcEDLGVdP--EDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|.|.+.. +.|+.+-+...+..+|..+  .+-.+-.+...+....-|.|+.++|+.-|..
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   73 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            356889999999665555 7899999999999999776  5544555555666677799999999988764

>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A

Probab=96.07  E-value=0.00099  Score=59.47  Aligned_cols=45  Identities=16%  Similarity=0.352  Sum_probs=0.0

Q ss_pred             cCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       154 kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      .++..|+++|.+|+..||.+.+-+..||+.++||++.|+..|-.-
T Consensus       193 ~~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l  237 (250)
T 1jkg_B          193 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHL  237 (250)
T ss_dssp             ---------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            456677799999999999999999999999999999999999753

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=95.91  E-value=0.032  Score=39.64  Aligned_cols=66  Identities=14%  Similarity=0.194  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+..++..+|+.+.+-.+-.+...+....-|.|+.++|+..|..
T Consensus        19 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           19 IAEFKAAFDMF-DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45778889988 5455579999999999999999988777777777777777899999999988753

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=95.90  E-value=0.029  Score=36.93  Aligned_cols=64  Identities=11%  Similarity=0.167  Sum_probs=52.3

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      .+.++|..|- .+..+.|+.+-+...+..+|..+.+..+-.+...+....-|.|+.++|+..|..
T Consensus         2 ~l~~~F~~~D-~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFD-KNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHC-TTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4667888884 334578999999999999999988777767777777778899999999998865

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=95.58  E-value=0.031  Score=38.08  Aligned_cols=66  Identities=12%  Similarity=0.256  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+...+..+|+.+..-.+-.+...+....-|.|+.++|+..|..
T Consensus         6 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLF-DTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHH-CCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            46788899988 4444578999999999999999987777767777777778899999999987753

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=95.45  E-value=0.094  Score=38.34  Aligned_cols=69  Identities=10%  Similarity=0.107  Sum_probs=56.3

Q ss_pred             ccCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         209 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       209 s~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ......+..+|..| |.+..+.|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+.-|..
T Consensus        25 ~~~~~~l~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~   93 (94)
T 2kz2_A           25 TDSEEEIREAFRVE-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA   93 (94)
T ss_dssp             CSCHHHHHHHHHHH-CTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHH-CCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            33567899999998 4444578999999999999999887777666667777777899999999987753

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=95.41  E-value=0.069  Score=37.74  Aligned_cols=66  Identities=12%  Similarity=0.179  Sum_probs=54.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.++|+..|.
T Consensus         7 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~   72 (92)
T 2kn2_A            7 AEEELKEAFKVF-DKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMM   72 (92)
T ss_dssp             HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            356789999998 444457899999999999999988777776777777777789999999998775

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=95.34  E-value=0.057  Score=40.06  Aligned_cols=65  Identities=12%  Similarity=0.158  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhh---CccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRF---KAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL---~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+.++|..|-. +..+.|+.+-+..++..+|+.|....+-.+...+   .... |.++.++|+..|..
T Consensus         7 ~~~l~~~F~~~D~-~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~   74 (149)
T 2mys_C            7 ADDFKEAFLLFDR-TGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQA   74 (149)
T ss_pred             HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHH
Confidence            3567778887743 3346899999999999999988877777777777   6667 99999999887653

>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}

Probab=95.15  E-value=0.02  Score=43.55  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=38.6

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         155 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       155 Lss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      +.-+.+..+.+|+.-|||.+-.|+..|+--|||+.+|+++|=
T Consensus        13 mt~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~e   54 (73)
T 2l2d_A           13 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYE   54 (73)
T ss_dssp             SSCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHH
Confidence            455678889999999999999999999999999999999995

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=94.97  E-value=0.096  Score=36.54  Aligned_cols=66  Identities=20%  Similarity=0.184  Sum_probs=53.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+...+..+| .+.+-.+-.+-..+....-|.|+.++|+..+..
T Consensus         9 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   74 (86)
T 2opo_A            9 DIADRERIFKRF-DTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   74 (86)
T ss_dssp             HHHHHHHHHHHH-CTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            356788899998 444457999999999999999 777766666777777778899999999987753

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=94.84  E-value=0.072  Score=36.78  Aligned_cols=66  Identities=12%  Similarity=0.095  Sum_probs=54.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcC-CCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS-LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLG-VdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+. +|..| |.+..+.|+.+-+...+..+| ..+.+-.+-.+...+....-|.|+.++|+.-|..
T Consensus         7 ~~~~l~-~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   73 (81)
T 1c7v_A            7 EEEILR-AFKVF-DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   73 (81)
T ss_dssp             CHHHHH-HHHHH-SCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHH-HHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            467888 99998 444447899999999999999 8887777777777777788899999999988754

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=94.81  E-value=0.054  Score=37.48  Aligned_cols=65  Identities=17%  Similarity=0.226  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcC--CCCCcHHHHH----HHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS--LSPESKLVLI----IAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLG--VdPEDvv~LV----LAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..++..+|..|- .+..+.|+.+-+..++..+|  ..+.+-.+-.    +-..+....-|.|+.+||+..+.
T Consensus         6 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~   76 (83)
T 1yx7_A            6 KAELEAAFKKLD-ANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA   76 (83)
T ss_dssp             CTHHHHHHHHHS-SSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence            457889999984 44457899999999999999  5443332222    33334445669999999998764

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=94.81  E-value=0.12  Score=36.14  Aligned_cols=65  Identities=12%  Similarity=0.143  Sum_probs=51.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHH---HHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKL---VLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv---~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+...+..+|..+....   +-.+...+....-|.|+. +|+..|.
T Consensus        12 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~   79 (86)
T 1j7q_A           12 EKDECMKIFDIF-DRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCS   79 (86)
T ss_dssp             HHHHHHHHHHHH-STTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHH
T ss_pred             HHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHH
Confidence            356788899998 4444578999999999999999998776   555555666666799999 9998775

>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A

Probab=94.76  E-value=0.013  Score=40.59  Aligned_cols=42  Identities=17%  Similarity=0.204  Sum_probs=37.7

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         157 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       157 s~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      +..+++|.+.+++ |.++..|++.|.+.+||.+.|++-.|.++
T Consensus         2 ~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~   43 (47)
T 1dv0_A            2 SQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN   43 (47)
T ss_dssp             -CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred             cchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence            5567889999998 99999999999999999999999999765

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=94.64  E-value=0.072  Score=36.51  Aligned_cols=64  Identities=16%  Similarity=0.234  Sum_probs=50.9

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      .++..+|..| |.+..+.|+.+-+..++..+| .+.+-.+-.+...+....-|.|+.++|+..+..
T Consensus         3 ~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   66 (78)
T 1k9u_A            3 DDMERIFKRF-DTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA   66 (78)
T ss_dssp             CHHHHHHHHH-CTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            4678899988 444457899999999999999 776666666666777777899999999987753

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=94.54  E-value=0.19  Score=38.27  Aligned_cols=65  Identities=12%  Similarity=0.160  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|..|-. +..+.|+.+.+..++..+|..+....+-.+...+....-|.++.++|+..+.
T Consensus        26 ~~~l~~~F~~~D~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~   90 (166)
T 2aao_A           26 IAGLKEMFNMIDA-DKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATL   90 (166)
T ss_dssp             HHHHHHHHHHHCT-TCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHT
T ss_pred             HHHHHHHHHHhCC-CCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            3456667777642 3346788888888888888877766666666666666678888888877654

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=94.52  E-value=0.11  Score=38.60  Aligned_cols=65  Identities=14%  Similarity=0.172  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|..|- .+..+.|+.+-+..++..+|+.+....+-.+...+....-|.++.++|+..+.
T Consensus         5 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~   69 (142)
T 2bl0_C            5 VSEFKEAFELFD-SERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMG   69 (142)
T ss_dssp             HHHHHHHHHHHC-TTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHH
Confidence            356777777773 22346788888888887888877766666666666666667888888877664

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=94.50  E-value=0.14  Score=38.55  Aligned_cols=66  Identities=11%  Similarity=0.164  Sum_probs=53.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+..++..+|+.+....+-.+...+....-|.|+.++|+..+.
T Consensus        21 ~~~~l~~~F~~~-D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~   86 (161)
T 3fwb_A           21 QKQEIYEAFSLF-DMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMG   86 (161)
T ss_dssp             HHHHHHHHHHHH-CTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHH
Confidence            345677777777 333457899999999999999999888877777888888889999999998774

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=94.48  E-value=0.12  Score=38.12  Aligned_cols=65  Identities=14%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..|-. +..+.|+.+-+.+++..+|+.+....+-.+...+....-|.++.++|+..+.
T Consensus        10 ~~~l~~~F~~~D~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~   74 (147)
T 4ds7_A           10 IAEFKEAFALFDK-DNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMS   74 (147)
T ss_dssp             HHHHHHHHHHHCT-TCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCC-CCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            4567778887743 3346899999999999999998887777777778777889999999988764

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=94.42  E-value=0.18  Score=36.42  Aligned_cols=66  Identities=11%  Similarity=0.065  Sum_probs=53.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+   |..+.+..+-.+-..+....-|.|+.++|+..|+
T Consensus        39 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           39 SLDDVKKAFYVI-DQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             CHHHHHHHHHHH-CTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            457899999998 44445789999999999999   7777776666666667777779999999998775

>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=94.35  E-value=0.032  Score=38.63  Aligned_cols=39  Identities=8%  Similarity=0.043  Sum_probs=34.8

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      ..+.|++.+++ |-++..|+..|++++||++.|++-.|..
T Consensus         8 ~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g   46 (49)
T 1ify_A            8 YETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG   46 (49)
T ss_dssp             HHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence            45789999998 8999999999999999999999887753

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=94.34  E-value=0.16  Score=38.76  Aligned_cols=66  Identities=9%  Similarity=0.163  Sum_probs=51.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHH----HHhhcCCCCCcHHHH-----------HHHHhhCccccccccHHHHHHh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMK----FLDDLSLSPESKLVL-----------IIAWRFKAAAQCEFSRDEFMNG  275 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiir----lcEDLGVdPEDvv~L-----------VLAwkL~A~sMGeFTReEFv~G  275 (279)
                      ..+++.++|+.| |.+..+.|+.+-+..    ++..+|+.|.+..+-           .+...+....-|.|+.+||+..
T Consensus         5 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~   83 (176)
T 1nya_A            5 ASDRLKKRFDRW-DFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRV   83 (176)
T ss_dssp             HHHHHHHHHHHC-CSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHH-cCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence            356888999998 444457899999988    788999999877654           4445666777799999999988


Q ss_pred             hh
Q psy9057         276 ML  277 (279)
Q Consensus       276 wk  277 (279)
                      +.
T Consensus        84 ~~   85 (176)
T 1nya_A           84 TE   85 (176)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=94.28  E-value=0.14  Score=37.85  Aligned_cols=62  Identities=15%  Similarity=0.202  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +..+.++|..|- .+..+.|+.+-+..++..+|+.|....+-.+...   ..-|.++.++|+..+.
T Consensus         4 ~~el~~~F~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~   65 (145)
T 2bl0_B            4 ADQIQECFQIFD-KDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYR   65 (145)
T ss_dssp             HHHHHHHHHHHC-TTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHT
T ss_pred             HHHHHHHHHHhC-CCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHH
Confidence            345777888773 3334678888888888888887765544443333   4557788888887664

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=94.27  E-value=0.17  Score=38.13  Aligned_cols=66  Identities=12%  Similarity=0.193  Sum_probs=52.2

Q ss_pred             CHHHHHHHHHHhcCCCC-CCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASE-PDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpdd-pD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..|- .+. .+.|+.+-+..++..+|+.+....+-.+...+....-|.|+.++|+..+.
T Consensus        16 ~~~~l~~~F~~~D-~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~   82 (161)
T 1dtl_A           16 QKNEFKAAFDIFV-LGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV   82 (161)
T ss_dssp             HHHHHHHHHHHHT-TTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            3456778888774 334 46899999999999999988877777777777777889999999998764

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=94.27  E-value=0.17  Score=38.05  Aligned_cols=66  Identities=12%  Similarity=0.255  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-|+.
T Consensus        95 ~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           95 LDEIKRAFQLF-DDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-cCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            46788899998 4444578999999999999999988877777777777778899999999988753

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=94.25  E-value=0.12  Score=38.10  Aligned_cols=66  Identities=15%  Similarity=0.248  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+...+..+|..+.+..+-.+...+....-|.|+.++|+.-|..
T Consensus        31 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~   96 (107)
T 2d58_A           31 LEGFKEKYMEF-DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG   96 (107)
T ss_dssp             HHHHHHHHTTS-CCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred             HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            45778888877 4455578999999999999999988777777777777777899999999987753

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=94.23  E-value=0.16  Score=39.80  Aligned_cols=67  Identities=10%  Similarity=0.144  Sum_probs=53.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc----CCCCCcHHHHHHH-----------HhhCccccccccHHHHHHh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL----SLSPESKLVLIIA-----------WRFKAAAQCEFSRDEFMNG  275 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL----GVdPEDvv~LVLA-----------wkL~A~sMGeFTReEFv~G  275 (279)
                      ..+++.++|+.|.|.+..+.|+.+-+...+..+    |..+.+..+-.+.           ..+....-|.|+.+||+..
T Consensus        10 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   89 (191)
T 2ccm_A           10 QRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKM   89 (191)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHH
Confidence            457899999999554445799999999999998    9988776665555           5667777799999999988


Q ss_pred             hh
Q psy9057         276 ML  277 (279)
Q Consensus       276 wk  277 (279)
                      |.
T Consensus        90 ~~   91 (191)
T 2ccm_A           90 WA   91 (191)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=94.20  E-value=0.23  Score=36.79  Aligned_cols=65  Identities=14%  Similarity=0.179  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhh-cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDD-LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcED-LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..| |.+..+.|+.+-+.+++.. +|..+.+..+-.+...+....-|.|+.++|+.-|+
T Consensus        87 ~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A           87 VKELRDAFREF-DTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            56788899998 3344578999999999999 89998887777777788888889999999998775

>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=94.18  E-value=0.037  Score=36.83  Aligned_cols=37  Identities=22%  Similarity=0.326  Sum_probs=33.1

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccccc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      .+.|++.+++ |-++..|++.|..++||++.|++-.|.
T Consensus         5 e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~   41 (43)
T 2g3q_A            5 SLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLD   41 (43)
T ss_dssp             HHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHc
Confidence            5789999997 899999999999999999999986654

>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=94.17  E-value=0.038  Score=41.82  Aligned_cols=45  Identities=9%  Similarity=0.181  Sum_probs=39.1

Q ss_pred             cCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       154 kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ...+...+.|++.+++ |-++..|+..|++++||++.|++-.|...
T Consensus        24 ~~~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~   68 (73)
T 1vg5_A           24 GRVAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS   68 (73)
T ss_dssp             CCSCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             cCCcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            3455567899999997 89999999999999999999999888653

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=94.14  E-value=0.3  Score=36.80  Aligned_cols=67  Identities=18%  Similarity=0.189  Sum_probs=54.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-|..
T Consensus        89 ~~~~~~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  155 (158)
T 2jnf_A           89 MQQELREAFRLY-DKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG  155 (158)
T ss_dssp             TSSTHHHHHHHH-CSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred             HHHHHHHHHHHh-CCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            345788899888 4344578999999999999998887777777777787788899999999987753

>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B

Probab=94.09  E-value=0.042  Score=38.56  Aligned_cols=39  Identities=5%  Similarity=0.166  Sum_probs=34.2

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         160 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       160 kelVrQF~sITGA-Sek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      .+.|++.+++ |- ++..|++.|.+++||++.|++-.|.+|
T Consensus        13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~   52 (52)
T 2jy5_A           13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS   52 (52)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence            4679999998 77 888899999999999999999888654

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=94.05  E-value=0.21  Score=36.82  Aligned_cols=64  Identities=11%  Similarity=0.105  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.++|+.-++
T Consensus        83 ~~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~  146 (147)
T 4ds7_A           83 EQELLEAFKVF-DKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS  146 (147)
T ss_dssp             HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred             HHHHHHHHHHh-CCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence            46788889888 4444578999999999999998887776666666777 7779999999998765

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=94.00  E-value=0.033  Score=36.82  Aligned_cols=63  Identities=16%  Similarity=0.240  Sum_probs=49.0

Q ss_pred             HHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         216 ESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       216 eaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ..+|..|- .+..+.|+.+-+..++..+|..+.+..+-.+-..+....-|.|+.+||+.-|..+
T Consensus         3 ~~~F~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~   65 (66)
T 3li6_A            3 EALFKEID-VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI   65 (66)
T ss_dssp             CHHHHHHC-TTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred             HHHHHHHC-CCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            45677774 3334789999999999999977766666666667777788999999999988764

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=93.96  E-value=0.27  Score=37.50  Aligned_cols=66  Identities=14%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.+||+.-|+.
T Consensus       100 ~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A          100 REEILKAFRLF-DDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            45778889988 4444579999999999999998887777777777777888899999999998754

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=93.91  E-value=0.32  Score=36.54  Aligned_cols=67  Identities=12%  Similarity=0.105  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ...+..+|..|- .+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-+..+
T Consensus        95 ~~~~~~~F~~~D-~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  161 (162)
T 1top_A           95 EEELANCFRIFD-KNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHHC-TTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence            457888898884 3345789999999999999987776666666666777777999999999987653

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=93.85  E-value=0.31  Score=35.22  Aligned_cols=67  Identities=12%  Similarity=0.073  Sum_probs=54.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|- .+..+.|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.++|+.-|++
T Consensus        40 ~~~~l~~~F~~~D-~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           40 SANDVKKVFKAID-ADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             CHHHHHHHHHHHC-TTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            4578899999984 3345789999999999999   77777766666666777777899999999998764

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=93.79  E-value=0.24  Score=37.83  Aligned_cols=65  Identities=9%  Similarity=0.220  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..|-. +..+.|+.+-+..++..+|+.+....+-.+-..+....-|.|+.++|+..+.
T Consensus        27 ~~~l~~~F~~~D~-d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   91 (169)
T 3qrx_A           27 KQEIREAFDLFDT-DGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT   91 (169)
T ss_dssp             HHHHHHHHHHHCT-TCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            4567777887743 3347899999999999999999888777777778777889999999998774

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=93.60  E-value=0.26  Score=37.18  Aligned_cols=65  Identities=12%  Similarity=0.222  Sum_probs=53.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ....|.++|+.| |.+..+.|+.+-+...+..||+.+.+-.+-.+-..+....-|.|+-+||+.=|
T Consensus        34 ~~~el~~~F~~~-D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           34 ELEEIREAFKVF-DRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             GHHHHHHHHHHT-CSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            346788889988 44445799999999999999999987777777778888888999999999744

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=93.60  E-value=0.31  Score=37.61  Aligned_cols=66  Identities=12%  Similarity=0.172  Sum_probs=52.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..|-. +..+.|+.+-+..++..+|+.|.+..+-.+...+....-|.++.+||+..+.
T Consensus         9 ~~~~l~~~F~~~D~-d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~   74 (179)
T 2f2o_A            9 QIAEFKEAFSLFDK-DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   74 (179)
T ss_dssp             HHHHHHHHHHHHCT-TCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHH
Confidence            34678888888743 3346899999999999999999887777777777777789999999988764

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=93.59  E-value=0.26  Score=35.71  Aligned_cols=67  Identities=10%  Similarity=0.110  Sum_probs=54.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+   |..+.+..+-.+-..+....-|.|+.++|+.-|++
T Consensus        39 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           39 TDAQVKEVFEIL-DKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CHHHHHHHHHHH-CTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            467899999998 44445799999999999998   88887766666666677777899999999988765

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=93.55  E-value=0.32  Score=35.15  Aligned_cols=66  Identities=8%  Similarity=0.083  Sum_probs=52.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+.-|.
T Consensus        22 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~   87 (105)
T 1wlz_A           22 HYHAITQEFENF-DTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFS   87 (105)
T ss_dssp             THHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC
T ss_pred             hHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHh
Confidence            346788899988 444457899999999999999998776665555556556679999999998765

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=93.51  E-value=0.25  Score=35.75  Aligned_cols=66  Identities=9%  Similarity=0.039  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.++|+.-|+
T Consensus        40 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           40 SADDIKKAFFVI-DQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             CHHHHHHHHHHH-CTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             hHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            457889999998 44445789999999999999   7777766666666667777779999999998775

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=93.40  E-value=0.27  Score=35.34  Aligned_cols=65  Identities=18%  Similarity=0.304  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ...+..+|..|- .+..+.|+.+-+..++..+|++.+.+.  .+...+....-|.|+.+||+..|..+
T Consensus        26 ~~~l~~~F~~~D-~d~~G~I~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           26 LARLRSVFAACD-ANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHHHC-TTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHHHC-CCCCCCCcHHHHHHHHHHcCcCHHHHH--HHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            357788898884 334578999999999999996554433  33345566667999999999988753

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=93.39  E-value=2  Score=32.70  Aligned_cols=67  Identities=6%  Similarity=-0.042  Sum_probs=52.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.++|+.-|..
T Consensus        93 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           93 PEDVIMGAFKVL-DPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             cHHHHHHHHHHh-CCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            457888899988 3344578999999999999997776655555555666667799999999988753

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=93.32  E-value=0.41  Score=36.25  Aligned_cols=65  Identities=15%  Similarity=0.220  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+...|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.++|+.-|.
T Consensus        78 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           78 KEEILKAFKLF-DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            35678889888 544557899999999999999888766666666666777789999999998775

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=93.30  E-value=0.18  Score=37.40  Aligned_cols=67  Identities=10%  Similarity=0.090  Sum_probs=55.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-|+.
T Consensus        74 ~~~~l~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B           74 PEDVIRNAFACF-DEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             CHHHHHHHHTTS-CSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             cHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            457888899888 4444578999999999999999888777777777777778899999999998763

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=93.27  E-value=0.34  Score=34.95  Aligned_cols=67  Identities=10%  Similarity=0.105  Sum_probs=53.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.++|+.-|..
T Consensus        39 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           39 SADDVKKVFHIL-DKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             CHHHHHHHHHHH-STTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             hHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            457889999998 43445789999999999999   77777666666666677777899999999998764

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=93.26  E-value=0.27  Score=35.54  Aligned_cols=66  Identities=8%  Similarity=0.091  Sum_probs=52.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..|- .+..+.|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.++|+.-|+
T Consensus        39 ~~~~l~~~F~~~D-~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           39 SASQVKDIFRFID-NDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CHHHHHHHHHHHC-TTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHhC-CCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            4578899999984 3445789999999999999   6777666655566666777789999999998775

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=93.15  E-value=0.21  Score=37.93  Aligned_cols=65  Identities=11%  Similarity=0.243  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .++|.++|+.|- .+..+.|+.+-+...+..+|..|....+--+...+....-|.|+.++|+..|.
T Consensus         5 ~~~l~~~F~~~D-~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (143)
T 2obh_A            5 KQEIREAFDLFD-ADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT   69 (143)
T ss_dssp             HHHHHHHHHTTC-TTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHH
Confidence            356677777763 33346788888888888888877766665566666666667888888876653

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=93.13  E-value=0.31  Score=36.83  Aligned_cols=65  Identities=11%  Similarity=0.157  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+.+..+|..|- .+..+.|+.+-+...+..+|..|.+..+-.+...+....-|.|+.++|+..|.
T Consensus         9 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~   73 (148)
T 1exr_A            9 IAEFKEAFALFD-KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA   73 (148)
T ss_dssp             HHHHHHHHHHHC-TTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            345677777663 33346788888888888888888777666666667777778888888887663

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=93.11  E-value=0.27  Score=36.31  Aligned_cols=66  Identities=12%  Similarity=0.152  Sum_probs=52.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+..|.
T Consensus        74 ~~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  139 (145)
T 2bl0_B           74 QSKEMLDAFRAL-DKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLV  139 (145)
T ss_dssp             GHHHHHHHHHHH-CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHh-CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHH
Confidence            457889999988 333457899999999999999887766655555666666779999999998875

>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}

Probab=93.07  E-value=0.064  Score=37.67  Aligned_cols=39  Identities=8%  Similarity=0.162  Sum_probs=34.0

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         160 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       160 kelVrQF~sITGA-Sek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      .+.|++.+++ |- ++..|++.|.+++||++.|++-.|..+
T Consensus        12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~   51 (53)
T 2knz_A           12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ   51 (53)
T ss_dssp             HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            3678999998 56 888999999999999999999888664

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=93.04  E-value=0.28  Score=36.35  Aligned_cols=65  Identities=14%  Similarity=0.150  Sum_probs=53.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.++|+.-|.
T Consensus        77 ~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  141 (142)
T 2bl0_C           77 SEDILRQAFRTF-DPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF  141 (142)
T ss_dssp             CHHHHHHHHHHT-CCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred             hHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence            457889999988 4444578999999999999998877766666667777 7779999999998765

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=93.01  E-value=0.43  Score=34.48  Aligned_cols=66  Identities=12%  Similarity=0.115  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+..++..+   |..+.+-.+-.+-..+....-|.|+.+||+.-|+
T Consensus        40 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           40 TPDQIKKVFGIL-DQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             CHHHHHHHHHHH-STTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             cHHHHHHHHHHH-CCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            467899999998 44445789999999999999   7777766666666666777779999999998775

>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=92.92  E-value=0.071  Score=41.36  Aligned_cols=40  Identities=10%  Similarity=0.164  Sum_probs=36.5

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      -.+.|++.+++ |-++..|+..|++++||++.|++-.|.++
T Consensus        29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~   68 (83)
T 1veg_A           29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG   68 (83)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            35789999998 99999999999999999999999999754

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=92.80  E-value=0.16  Score=37.72  Aligned_cols=60  Identities=13%  Similarity=0.202  Sum_probs=34.2

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +.+.++|..|-. +..+.|+.+-+...+..+|+.|....+-.+.   . ..-|.|+.++|+..+.
T Consensus         5 ~~l~~~F~~~D~-d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~   64 (140)
T 1ggw_A            5 SPYKQAFSLFDR-HGTGRIPKTSIGDLLRACGQNPTLAEITEIE---S-TLPAEVDMEQFLQVLN   64 (140)
T ss_dssp             TTTHHHHHHTCS-SSSSEECHHHHHHHHHHTSCCCCHHHHHHHH---T-TSCSSEEHHHHHHHHC
T ss_pred             HHHHHHHHHHCC-CCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH---h-CCCCcCcHHHHHHHHH
Confidence            345666666632 2335677777777777777766544433322   2 4446677777766553

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=92.79  E-value=0.25  Score=36.81  Aligned_cols=66  Identities=14%  Similarity=0.197  Sum_probs=53.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-|.
T Consensus        81 ~~~~~~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A           81 KTEDFVKAFQVF-DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             CTHHHHHHHHTT-CSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            346788899988 444457899999999999999988776666666666667779999999998775

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=92.77  E-value=0.4  Score=36.09  Aligned_cols=67  Identities=13%  Similarity=0.175  Sum_probs=55.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+.++|..|-..+..+.|+.+-+..++..+|+.|....+-.+...+....-|.|+.++|+..+.
T Consensus        11 ~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~   77 (158)
T 2jnf_A           11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGA   77 (158)
T ss_dssp             HHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3457788898885133347899999999999999999887777777788888889999999999874

>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=92.73  E-value=0.094  Score=40.50  Aligned_cols=39  Identities=18%  Similarity=0.218  Sum_probs=35.5

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      .+.|++++++ |.++..|++.|..++|+++.|++-.|.++
T Consensus        22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~   60 (85)
T 2dkl_A           22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK   60 (85)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence            5679999997 99999999999999999999999888764

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=92.66  E-value=0.39  Score=35.83  Aligned_cols=67  Identities=15%  Similarity=0.129  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhh-cCCCCCcHHHHHHHHh----hCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDD-LSLSPESKLVLIIAWR----FKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcED-LGVdPEDvv~LVLAwk----L~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++.. +|..+.+-.+-.+...    +....-|.|+.+||+.-|..
T Consensus        73 ~~~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  144 (155)
T 3ll8_B           73 KEQKLRFAFRIY-DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  144 (155)
T ss_dssp             HHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred             HHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            346788899998 4444578999999999998 6877776666555555    77778899999999998865

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=92.65  E-value=0.21  Score=37.64  Aligned_cols=67  Identities=15%  Similarity=0.155  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ...+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.++|+..|..+
T Consensus        94 ~~~~~~~F~~~-D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  160 (161)
T 1dtl_A           94 EEELSDLFRMF-DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV  160 (161)
T ss_dssp             HHHHHHHHHHH-CTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred             HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence            46788899988 33445789999999999999987776666666667777778999999999988754

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=92.63  E-value=0.35  Score=36.48  Aligned_cols=67  Identities=10%  Similarity=0.092  Sum_probs=52.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHh--hCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWR--FKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwk--L~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...  +....-|.|+.++|+.-|..
T Consensus        82 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C           82 TFADYMEAFKTF-DREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             CHHHHHHHHHTT-CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence            457888999988 43445789999999999999988766555555555  66667799999999987753

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=92.61  E-value=0.1  Score=36.37  Aligned_cols=63  Identities=11%  Similarity=0.095  Sum_probs=51.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ..+.++|..| |.+..+.|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..+
T Consensus        23 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           23 GGLKELFKMI-DTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTHHHHH-CTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            4577889888 44445789999999999999999887777777777777778999999998765

>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=92.59  E-value=0.049  Score=38.72  Aligned_cols=40  Identities=13%  Similarity=0.112  Sum_probs=34.3

Q ss_pred             HHHHHHHHhhhCCCHHH-HHHHHHhCCCchhhhccccccCCc
Q psy9057         160 KDKVKRFISFTQTGELT-AINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       160 kelVrQF~sITGASek~-A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      .+.|++.+++ |-++.. +++.|++++||++.|++-.|..|.
T Consensus        10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~   50 (54)
T 2dah_A           10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG   50 (54)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            5678999988 886665 699999999999999999997764

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=92.56  E-value=0.28  Score=36.88  Aligned_cols=64  Identities=13%  Similarity=0.188  Sum_probs=40.1

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+.++|..|- .+..+.|+.+-+..++..+|+.+....+-.+...+....-|.++.++|+..|.
T Consensus        20 ~~l~~~F~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~   83 (162)
T 1top_A           20 AEFKAAFDMFD-ADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   83 (162)
T ss_dssp             HHHHHHHHTTT-CSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHC-CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHH
Confidence            45555665553 22335677777777777777777666555555666666667777777776653

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=92.45  E-value=0.22  Score=38.65  Aligned_cols=66  Identities=14%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHH-----HHHhhcCCCCCcH-----HHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIM-----KFLDDLSLSPESK-----LVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGii-----rlcEDLGVdPEDv-----v~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+++..+|..| |.+..+.|+.+-+.     ..+..+|..|.+.     .+-.+...+....-|.|+.+||+..|.
T Consensus        14 ~~~~l~~~F~~~-D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~   89 (191)
T 1uhk_A           14 WIGRHKHMFNFL-DVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWK   89 (191)
T ss_dssp             HHHHHHHHHHHH-CTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhhc-cCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHH
Confidence            356788999998 44445789999998     7889999999766     344445556666779999999998775

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=92.36  E-value=0.54  Score=34.29  Aligned_cols=66  Identities=15%  Similarity=0.224  Sum_probs=53.4

Q ss_pred             HHHHHHHHHhcCCC-CCCccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDAS-EPDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpd-dpD~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..|..+|..|-+.+ +.+.|+.+-+..++..     ||..+.+..+--+-..+....=|.|+-+||+..|..
T Consensus         9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~   80 (92)
T 3rm1_A            9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM   80 (92)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            56788999998433 2359999999999999     998887777666666777778899999999988764

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=92.29  E-value=0.31  Score=36.03  Aligned_cols=65  Identities=9%  Similarity=0.179  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+.+.++|..|-. +..+.|+.+.+..++..+|+.+....+-.+...+....-|.|+.++|+..|.
T Consensus        10 ~~~l~~~F~~~D~-d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~   74 (153)
T 3ox6_A           10 IEELREAFREFDK-DKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMG   74 (153)
T ss_dssp             HHHHHHHHHHHHH-HCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHH
Confidence            4677788888742 2346899999999999999999988887777777777789999999998874

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=92.27  E-value=0.24  Score=38.69  Aligned_cols=66  Identities=18%  Similarity=0.213  Sum_probs=50.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHH-----HHHhhcCCCCCcH-----HHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIM-----KFLDDLSLSPESK-----LVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGii-----rlcEDLGVdPEDv-----v~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+++.++|+.| |.+..+.|+.+-+.     ..+..+|+.|.+.     .+-.+...+....-|.|+.+||+..|.
T Consensus        18 ~~~~l~~~F~~~-D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~   93 (195)
T 1qv0_A           18 WIKRHKHMFDFL-DINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWK   93 (195)
T ss_dssp             HHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHhHc-CCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHH
Confidence            356788899988 44445789999998     6889999998765     344455566666779999999998764

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=92.14  E-value=0.34  Score=38.03  Aligned_cols=65  Identities=15%  Similarity=0.284  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..| |.+..+.|+.+-+...+..+|..+.+..+-.+-..+....-|.|+.++|+.-|.
T Consensus        47 ~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~  111 (147)
T 1wy9_A           47 LEAFKVKYMEF-DLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMML  111 (147)
T ss_dssp             HHHHHHHHTTS-CCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHC
T ss_pred             HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            45677888877 444457899999999999999998877766666677777789999999998775

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=92.11  E-value=0.34  Score=34.85  Aligned_cols=65  Identities=11%  Similarity=0.148  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHh---hcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLD---DLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcE---DLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..|-. +..+.|+.+-...++.   ..+..+....+-.+-..+....-|.+++++|...+.
T Consensus        35 ~~~~~~~~~~~D~-~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~  102 (134)
T 1jfj_A           35 EQLLQLIFKSIDA-DGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK  102 (134)
T ss_dssp             HHHHHHHHHHHCS-SCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHcC-CCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHH
Confidence            4455555555532 2234566655555554   222222222222222233344456666666665554

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=92.05  E-value=0.59  Score=35.90  Aligned_cols=66  Identities=14%  Similarity=0.048  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCC-CCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGV-dPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+..++..+|+ .+.+-.+-.+-..+....-|.|+.++|+.-|..
T Consensus        39 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~  105 (135)
T 3h4s_E           39 VSELCKGFSLL-ADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVR  105 (135)
T ss_dssp             HHHHHHHHHHH-SBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            46788899998 4344579999999999999996 776666656666677777799999999987753

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=92.03  E-value=0.63  Score=34.29  Aligned_cols=66  Identities=6%  Similarity=0.059  Sum_probs=50.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|- .+..+.|+.+-+..++..+|..+.+-.+-.+... ....-|.|+.++|+.-|.+
T Consensus        83 ~~~~~~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           83 TFEDFVEGLRVFD-KEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             hHHHHHHHHHHhC-CCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            3567888898884 3345789999999999999987765554444444 5566799999999987754

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=91.97  E-value=0.42  Score=37.70  Aligned_cols=64  Identities=9%  Similarity=0.184  Sum_probs=34.4

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+.++|..|- .+..+.|+.+-+...+..+|+.+.+..+-.+-..+....-|.|+.+||+..+.
T Consensus        37 ~~l~~~F~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~  100 (204)
T 3e3r_A           37 QGLARFFRQLD-RDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALR  100 (204)
T ss_dssp             ---CHHHHHHC-TTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTS
T ss_pred             HHHHHHHHHHc-cCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            34555565552 22234566666666666666666555555555555555556666666665543

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=91.84  E-value=0.46  Score=36.78  Aligned_cols=63  Identities=13%  Similarity=0.317  Sum_probs=40.5

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..|- .+..+.|+.+-+.+++..+|..+.+..+-.+...+....-|.++.+||+..|.
T Consensus        75 ~~~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  137 (172)
T 2znd_A           75 DWQNVFRTYD-RDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI  137 (172)
T ss_dssp             HHHHHHHHHC-TTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            4556666663 22335677777777777777766655555555556666667777777776654

>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=91.81  E-value=0.14  Score=38.35  Aligned_cols=41  Identities=24%  Similarity=0.326  Sum_probs=36.2

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      ..+.|++.+++ |-++..|++.|++++||++.|++-.|.++.
T Consensus        29 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~~   69 (73)
T 1wiv_A           29 DQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNSG   69 (73)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            35679999987 899999999999999999999998887653

>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=91.78  E-value=0.11  Score=37.99  Aligned_cols=40  Identities=13%  Similarity=0.156  Sum_probs=35.4

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ..+.|++.+++ |-++..|++.|.+++||++.|++-.|.++
T Consensus         9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~   48 (63)
T 1wji_A            9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            35789999986 99999999999999999999999888653

>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.68  E-value=0.085  Score=38.03  Aligned_cols=39  Identities=23%  Similarity=0.273  Sum_probs=34.8

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      ..+.|++.+++ |-++..|++.|.+++||++.|++-.|.+
T Consensus         9 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~   47 (63)
T 2dak_A            9 PEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSH   47 (63)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHH
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence            35779999996 9999999999999999999999888865

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=91.67  E-value=0.51  Score=37.04  Aligned_cols=66  Identities=14%  Similarity=0.228  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+..++..+|..+.+..+-.+...+....-|.|+.++|+.-|..
T Consensus        49 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~  114 (150)
T 2jjz_A           49 LTAFKEKYMEF-DLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLG  114 (150)
T ss_dssp             HHHHHHHHTTS-CCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred             HHHHHHHHHHh-CCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            46788888888 4444578999999999999999887766666666666667799999999988753

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=91.59  E-value=0.45  Score=35.19  Aligned_cols=66  Identities=12%  Similarity=0.108  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+.. .-|.|+.++|+.-|..
T Consensus        74 ~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~  139 (140)
T 1ggw_A           74 DPEEFVKGFQVF-DKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA  139 (140)
T ss_dssp             CHHHHHHHHHTT-CSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred             cHHHHHHHHHHh-CCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence            347888999988 44445789999999999999988777666666667777 7799999999987753

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=91.56  E-value=0.35  Score=34.06  Aligned_cols=67  Identities=13%  Similarity=0.163  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD-~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|-..+..+ .|+.+-+..++..     +|..+.+..+-.+...+....-|.|+.++|+..|..
T Consensus         8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~   80 (93)
T 1k2h_A            8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            457888999994122336 8999999999998     998887766666666666667799999999988754

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=91.49  E-value=1.1  Score=33.79  Aligned_cols=65  Identities=12%  Similarity=0.156  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+...|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.++|+.-|.
T Consensus        82 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A           82 EEELIEAFKVF-DRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHHHHHHHHHH-STTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            35677788777 444457899999999999999887766666666667767779999999998775

>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2

Probab=91.38  E-value=0.14  Score=38.05  Aligned_cols=37  Identities=14%  Similarity=-0.015  Sum_probs=33.6

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      .+.|.+.++.||++-..|...|..++||++.|+.--=
T Consensus        10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~Lr   46 (64)
T 2cp9_A           10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLH   46 (64)
T ss_dssp             CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            3679999999999999999999999999999997543

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=91.32  E-value=0.47  Score=38.18  Aligned_cols=64  Identities=9%  Similarity=0.081  Sum_probs=40.8

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+.++|..|- .+..+.|+.+-+..++..+|..+.+..+-.+...+....-|.|+.+||+..+.
T Consensus        10 ~~l~~~F~~~D-~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~   73 (188)
T 1s6i_A           10 GGLKELFKMID-TDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATV   73 (188)
T ss_dssp             CSHHHHHHTTS-SSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHHHC-CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHH
Confidence            45666676663 22335677777777777777777665555555566666667777777776653

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=91.31  E-value=0.45  Score=34.00  Aligned_cols=67  Identities=13%  Similarity=0.222  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHh-hcC----CCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPD-KILVEGIMKFLD-DLS----LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD-~IgiDGiirlcE-DLG----VdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|-+.+..+ .|+.+-+..++. .+|    ..+....+-.+...+....-|.|+.+||+.-|..
T Consensus        12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~   84 (99)
T 1qls_A           12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG   84 (99)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            357889999996454456 899999999998 453    5555555555555666677799999999987753

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=91.17  E-value=0.63  Score=34.92  Aligned_cols=65  Identities=14%  Similarity=0.262  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHH----HhhcCCCCCcHHHHHH-----------HHhhCccccccccHHHHHHhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKF----LDDLSLSPESKLVLII-----------AWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirl----cEDLGVdPEDvv~LVL-----------AwkL~A~sMGeFTReEFv~Gw  276 (279)
                      .+++..+|..| |.+..+.|+.+-+...    +..+|..|.+..+-.+           -..+....-|.|+.+||+..+
T Consensus         3 ~~~l~~~F~~~-D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            3 ERRIAARFTTF-DQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHhHH-cCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            46788999998 4444578999888885    5677999877655433           255666677999999999876


Q ss_pred             h
Q psy9057         277 L  277 (279)
Q Consensus       277 k  277 (279)
                      .
T Consensus        82 ~   82 (166)
T 3akb_A           82 V   82 (166)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=91.08  E-value=0.28  Score=34.19  Aligned_cols=66  Identities=8%  Similarity=0.137  Sum_probs=50.8

Q ss_pred             HHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh---cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASEPD-KILVEGIMKFLDD---LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD-~IgiDGiirlcED---LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..+..+|..|-..+..+ .|+.+-+...+..   +|..+.+..+-.+...+....-|.|+.+||+..|..
T Consensus        10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   79 (90)
T 1k8u_A           10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   79 (90)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            57888999996223346 8999999999997   998777666655556666667799999999987753

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=91.07  E-value=0.45  Score=36.41  Aligned_cols=67  Identities=10%  Similarity=0.062  Sum_probs=51.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcC----CCCCcHHHHHH-----------HHhhCccccccccHHHHHHh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS----LSPESKLVLII-----------AWRFKAAAQCEFSRDEFMNG  275 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLG----VdPEDvv~LVL-----------AwkL~A~sMGeFTReEFv~G  275 (279)
                      ..+++..+|+.|.|.+..+.|+.+-+..++..++    ..|....+-.+           ...+....-|.|+.+||+..
T Consensus         6 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~   85 (185)
T 2sas_A            6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAM   85 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHH
Confidence            4578999999994444457899999999999888    77766554433           44556667799999999988


Q ss_pred             hh
Q psy9057         276 ML  277 (279)
Q Consensus       276 wk  277 (279)
                      |.
T Consensus        86 ~~   87 (185)
T 2sas_A           86 WE   87 (185)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=91.02  E-value=0.33  Score=35.98  Aligned_cols=60  Identities=12%  Similarity=0.173  Sum_probs=41.1

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+.++|..| |.+..+.|+.+-+..++..+|+.|....+-.+   +.. .-|.|+.++|+..|.
T Consensus         7 ~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~---~~~-~~g~i~~~eF~~~~~   66 (143)
T 3j04_B            7 QEFKEAFNMI-DQNRDGFIDKEDLHDMLASMGKNPTDEYLEGM---MSE-APGPINFTMFLTMFG   66 (143)
T ss_dssp             HHHHHHHTTT-CSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTT---TTT-SSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHh-CCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHH---HHh-CCCCcCHHHHHHHHH
Confidence            4666777776 33334689999999999889988865443322   222 568888888887765

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=90.98  E-value=0.64  Score=37.38  Aligned_cols=62  Identities=16%  Similarity=0.128  Sum_probs=33.8

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ..+.++|..|- .+..+.|+.+-+..++..+|+.+. ..+-.+...+....-|.|+.+||+..|
T Consensus        52 ~~l~~~F~~~D-~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~  113 (191)
T 3k21_A           52 EKLKSTFLVLD-EDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAA  113 (191)
T ss_dssp             HHHHHHHHHHC-TTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHC-CCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            45555666652 222346666666666666666655 333334444445555666666666554

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=90.96  E-value=0.16  Score=37.89  Aligned_cols=63  Identities=11%  Similarity=0.177  Sum_probs=47.9

Q ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhh-CccccccccHHHHHHhhhc
Q psy9057         215 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRF-KAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       215 LeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL-~A~sMGeFTReEFv~Gwk~  278 (279)
                      +.++|..|- .+..+.|+.+-+..++..+|+.|....+-.+...+ ....-|.|+.++|+..+..
T Consensus         6 l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~   69 (148)
T 1m45_A            6 NKDIFTLFD-KKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEV   69 (148)
T ss_dssp             CTTCHHHHC-TTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHC-CCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHH
Confidence            455677774 33447899999999999999999887777777777 7777899999999987753

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=90.96  E-value=0.71  Score=35.58  Aligned_cols=65  Identities=11%  Similarity=0.157  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|.
T Consensus        83 ~~~~~~~F~~~-D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  147 (179)
T 2f2o_A           83 EEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  147 (179)
T ss_dssp             HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSC
T ss_pred             HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence            35678889888 333447899999999999999887766666666677777789999999998764

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=90.85  E-value=0.85  Score=36.68  Aligned_cols=62  Identities=8%  Similarity=-0.006  Sum_probs=49.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....|..+|..|- .+..+.|+.+-+..++..||+.+.+..+-.+...+    -|.|+.++|+..|.
T Consensus        55 ~~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~  116 (196)
T 3dtp_E           55 QVQEFKEAFQLID-QDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFG  116 (196)
T ss_dssp             THHHHHHHHHHHC-CSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC-CCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHH
Confidence            4568899999884 33347899999999999999999876665555444    78999999998875

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=90.76  E-value=0.84  Score=34.46  Aligned_cols=66  Identities=12%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+... -|.|+.++|+.-|..
T Consensus        85 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~  150 (156)
T 1wdc_B           85 SEETIRNAFAMF-DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  150 (156)
T ss_dssp             CHHHHHHHHHTT-CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             hHHHHHHHHHHH-CcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence            356788999988 444457899999999999999887766666666677777 899999999987753

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=90.66  E-value=0.71  Score=35.73  Aligned_cols=63  Identities=11%  Similarity=0.082  Sum_probs=49.8

Q ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         215 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       215 LeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      +..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|..
T Consensus       111 ~~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~  173 (191)
T 1uhk_A          111 GDALFDIV-DKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG  173 (191)
T ss_dssp             HHHHHHHH-CTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHh-cCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            34788887 3344578999999999999998887766666666677677799999999988753

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=90.60  E-value=0.88  Score=36.21  Aligned_cols=67  Identities=19%  Similarity=0.204  Sum_probs=51.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc-CCCCCcHHHHHHHHh----hCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-SLSPESKLVLIIAWR----FKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL-GVdPEDvv~LVLAwk----L~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|- .+..+.|+.+-+.+++..+ |..+.+-.+-.+...    +....-|.|+.+||+..|..
T Consensus       112 ~~~~l~~~F~~~D-~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  183 (202)
T 2bec_A          112 RRNKLHYAFQLYD-LDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK  183 (202)
T ss_dssp             HHHHHHHHHHHHC-TTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHHhC-CCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            4567888999884 3445789999999999999 977765554444444    66677799999999987754

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=90.53  E-value=0.53  Score=36.41  Aligned_cols=66  Identities=14%  Similarity=0.089  Sum_probs=45.7

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcC-CCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS-LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLG-VdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+++.++|..|-. +..+.|+.+-+..++..+| ..+....+-.+...+....-|.++.+||+..|.
T Consensus         5 ~~~~l~~~F~~~D~-d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~   71 (172)
T 2znd_A            5 DQSFLWNVFQRVDK-DRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK   71 (172)
T ss_dssp             -CHHHHHHHHHHCT-TCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHH
T ss_pred             chhHHHHHHHHhCC-CCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            45678888888832 2236788888888888888 555555555555566666778888888887664

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=90.51  E-value=0.3  Score=36.88  Aligned_cols=65  Identities=9%  Similarity=0.129  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHhcC-CCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKD-ASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkD-pddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|..|-. ++..+.|+.+-+...+..+|+.|....+-.+ ..+....-|.|+.++|+..+.
T Consensus         8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~   73 (156)
T 1wdc_C            8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYE   73 (156)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHH
Confidence            3456677777642 0223578888888888888887776655555 555555667888888877654

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=90.49  E-value=0.17  Score=37.87  Aligned_cols=65  Identities=14%  Similarity=0.172  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCcc--ccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAA--AQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~--sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|..|-. +..+.|+.+-+...+..+|+.|....+-.+...+...  .-|.|+.++|+..|.
T Consensus         9 ~~~l~~~F~~~D~-d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~   75 (151)
T 1w7j_B            9 LEEFKEAFELFDR-VGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQ   75 (151)
T ss_dssp             --CHHHHHHHHCC-SSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHH
Confidence            3567788888843 3346899999999999999999876665555555555  568999999998765

>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A

Probab=90.45  E-value=0.17  Score=43.42  Aligned_cols=38  Identities=16%  Similarity=0.343  Sum_probs=34.0

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         158 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       158 ~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      .-.++|++|+++ |-++..|+..|.+++||++.|++.-|
T Consensus       162 ~~eekV~~l~~M-Gf~~~~a~~AL~~~~wd~~~A~e~L~  199 (201)
T 3k9o_A          162 EYTKKIENLCAM-GFDRNAVIVALSSKSWDVETATELLL  199 (201)
T ss_dssp             HHHHHHHHHHTT-TCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             hhHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHh
Confidence            346889999998 99999999999999999999998654

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=90.17  E-value=1  Score=34.44  Aligned_cols=66  Identities=8%  Similarity=0.045  Sum_probs=54.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....|...|..| |.+..+.|+.+-+.+.+..+|..+.+..+-.+...+-...=|.|+.+||+.=|+
T Consensus        81 ~~~~l~~aF~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A           81 TEEEMREAFKIF-DRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             THHHHHHHHHHH-HSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHH-CCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            456788899988 334457999999999999999999887777777777777779999999998664

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=90.12  E-value=0.78  Score=35.74  Aligned_cols=64  Identities=11%  Similarity=0.114  Sum_probs=48.8

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      .+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|..
T Consensus       114 ~~~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  177 (195)
T 1qv0_A          114 WGDAVFDIF-DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  177 (195)
T ss_dssp             HHHHHHHHT-C----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHh-cCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            344788887 4344578999999999999998887766666666777777799999999988753

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=90.05  E-value=1  Score=33.65  Aligned_cols=64  Identities=9%  Similarity=0.164  Sum_probs=48.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+  ..=|.|+.++|+.-|.
T Consensus        82 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           82 NVEELIKMFAHF-DNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             CHHHHHHHHHTT-CTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             hHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            356788999988 444457899999999999999776554444444444  5669999999998775

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=89.80  E-value=0.78  Score=34.41  Aligned_cols=63  Identities=17%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|+.| |.+..+.|+.+-+..++..+|++.+  .+--+-..+....-|.|+++||+..|+
T Consensus        10 ~~~~~~~F~~~-D~d~dG~Is~~el~~~l~~~~l~~~--~l~~i~~~~D~d~dG~i~~~EF~~~~~   72 (99)
T 1qjt_A           10 NPVYEKYYRQV-EAGNTGRVLALDAAAFLKKSGLPDL--ILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             CTHHHHHHHHH-CCTTSSCCCSHHHHHHHHTSSSCHH--HHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHcCCCHH--HHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            45788899998 4444578999999999999997533  333333345566779999999999875

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=89.59  E-value=1.1  Score=35.75  Aligned_cols=63  Identities=8%  Similarity=0.123  Sum_probs=40.0

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..|- .+..+.|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+..|.
T Consensus        94 ~~~~~F~~~D-~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  156 (191)
T 1y1x_A           94 SMREGFRKRD-SSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI  156 (191)
T ss_dssp             HHHHHHHHHC-TTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHhC-CCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4556666653 23335677777777777777766655555555555555667777777776654

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=89.53  E-value=0.71  Score=38.34  Aligned_cols=62  Identities=10%  Similarity=0.084  Sum_probs=35.6

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||++.|.
T Consensus       118 ~l~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~  179 (220)
T 3sjs_A          118 LAYNLFVMN-ARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICA  179 (220)
T ss_dssp             HHHHHHHHH-CCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHH
T ss_pred             HHHHHHHHH-CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH
Confidence            355566665 3333456777777777777776665544444445555 5557777777766553

>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=89.46  E-value=0.24  Score=35.81  Aligned_cols=39  Identities=8%  Similarity=0.098  Sum_probs=32.4

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         160 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       160 kelVrQF~sITGA-Sek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      .+.|++.+++ |- ++..+++.|++++||++.|++-.|..|
T Consensus        18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~   57 (58)
T 1wr1_B           18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD   57 (58)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            3578888888 76 456679999999999999999888664

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=89.44  E-value=0.35  Score=36.18  Aligned_cols=63  Identities=11%  Similarity=0.150  Sum_probs=49.2

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.++|+.-|.
T Consensus        87 ~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  149 (151)
T 1w7j_B           87 EDYLEGFRVF-DKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL  149 (151)
T ss_dssp             -CCHHHHHTT-CTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred             HHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence            4566788887 4444578999999999999998877666666666666 6779999999998765

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=89.32  E-value=1  Score=33.05  Aligned_cols=64  Identities=11%  Similarity=0.078  Sum_probs=47.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+.++|+.|-. +..+.|+.+-+..++..+|++.+++.-  +-..+....-|.|+.+||+..|.
T Consensus         8 ~~~~~~~~F~~~D~-d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~   71 (95)
T 1c07_A            8 EKAKYDEIFLKTDK-DMDGFVSGLEVREIFLKTGLPSTLLAH--IWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHHHHHCT-TCSSEECHHHHHHHHHTTTCCHHHHHH--HHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CCCCcEeHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCcCCHHHHHHHHH
Confidence            35678889999843 334789999999999999976443332  23344556679999999998875

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=89.31  E-value=1.2  Score=34.04  Aligned_cols=61  Identities=3%  Similarity=-0.002  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCC-CCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-SPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGV-dPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..|- .+..+.|+.+-+..++..+|+ .|....+-.+....    -|.|+.++|+..|.
T Consensus        24 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~   85 (166)
T 2mys_B           24 IEDFKEAFTVID-QNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFG   85 (166)
T ss_pred             HHHHHHHHHHHC-CCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHH
Confidence            456777777773 333467888888888888888 77654433333221    47888888877664

>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.24  E-value=0.31  Score=32.97  Aligned_cols=39  Identities=10%  Similarity=0.334  Sum_probs=33.7

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ..+.|++.+++ |-++..|++.|.+.+ |++.|++-.+.+|
T Consensus         9 ~~~~v~~L~~M-GF~~~~a~~AL~~~~-n~e~A~~~L~~h~   47 (47)
T 2ekk_A            9 NQQQLQQLMDM-GFTREHAMEALLNTS-TMEQATEYLLTHP   47 (47)
T ss_dssp             CHHHHHHHHHH-HCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence            35779999996 999999999999998 9999998777653

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=89.23  E-value=1.3  Score=33.12  Aligned_cols=63  Identities=10%  Similarity=0.097  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+|++.+.  +-.+...+....-|.|+.+||+.-|..
T Consensus        98 ~~~~~~F~~~-D~d~~G~i~~~E~~~~l~~~~~~~~~--~~~~~~~~D~d~dg~i~~~ef~~~~~~  160 (166)
T 3akb_A           98 PFLHAALGVA-DTDGDGAVTVADTARALTAFGVPEDL--ARQAAAALDTDGDGKVGETEIVPAFAR  160 (166)
T ss_dssp             HHHHHHHHHH-CSSSSSCCBHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHh-CCCCCCcCCHHHHHHHHHHhCCCHHH--HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4578889777 44445789999999999999944333  334444566677799999999988754

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=89.20  E-value=1.1  Score=34.15  Aligned_cols=64  Identities=16%  Similarity=0.127  Sum_probs=45.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+.++|+.|- .+..+.|+.+-+..++...+++.+  .+--+-..+....-|.|+.+||+..|.
T Consensus        12 ~~~~l~~~F~~~D-~d~dG~I~~~El~~~l~~~~~~~~--~~~~i~~~~D~d~dG~I~~~EF~~~~~   75 (111)
T 2kgr_A           12 SRLKYRQLFNSHD-KTMSGHLTGPQARTILMQSSLPQA--QLASIWNLSDIDQDGKLTAEEFILAMH   75 (111)
T ss_dssp             HHHHHHHHHHTTS-CSSCCEEEHHHHHHHHHTTCCCHH--HHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC-CCCCCcCcHHHHHHHHHhCCCCHH--HHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            3567888999984 334578999999999985444433  333333455666779999999998875

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=89.20  E-value=0.67  Score=36.00  Aligned_cols=64  Identities=8%  Similarity=0.115  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc-C-------CCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL-S-------LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL-G-------VdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+++..+|..|-  +..+.|+.+-+..++..+ |       ..+....+-.+...+....-|.++.+||+..|.
T Consensus         3 ~~~l~~~F~~~D--d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~   74 (173)
T 1alv_A            3 VRQFRRLFAQLA--GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN   74 (173)
T ss_dssp             HHHHHHHHHHHH--GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             hhHHHHHHHHHh--CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            357888999985  334789999999999887 7       555555555566667777789999999998765

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=89.15  E-value=0.88  Score=36.28  Aligned_cols=68  Identities=7%  Similarity=0.052  Sum_probs=47.2

Q ss_pred             ccCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         209 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       209 s~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ......+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+.
T Consensus        55 ~~~~~~~~~~f~~~D~-d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~  122 (204)
T 1jba_A           55 EEATQYVEAMFRAFDT-NGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVE  122 (204)
T ss_dssp             STTHHHHHHHHHHHCC-SSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHcC-CCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3456677888888743 3346788888888888887766554444444556666778888888887665

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=89.06  E-value=1.1  Score=33.52  Aligned_cols=67  Identities=16%  Similarity=0.216  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD-~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|.++|..|-+.++.+ .|+.+-+..++..     ||..+.+..+--+-..+....-|.|+-+||+..|..
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   81 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA   81 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            457888999995333334 8999999999976     777776655555666677777899999999987753

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=88.88  E-value=0.64  Score=35.63  Aligned_cols=64  Identities=11%  Similarity=0.181  Sum_probs=50.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +.|..+|+.|=. +..+.|+.+-+..++..+|.+|.+..+-.+...+....-|.++..+|+..+.
T Consensus        10 ~el~~~F~~~D~-d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~   73 (148)
T 2lmt_A           10 AEFKDAFVQFDK-EGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMA   73 (148)
T ss_dssp             HHHHHHHHHHHC-SSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcC-CCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHH
Confidence            567778888732 2346899999999999999999888777777777778889999999987664

>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}

Probab=88.85  E-value=0.17  Score=32.68  Aligned_cols=16  Identities=63%  Similarity=0.852  Sum_probs=14.2

Q ss_pred             ChhHHHHHHHhhhhhh
Q psy9057         114 NIDEEVKELENNYRKT  129 (279)
Q Consensus       114 ~~~~~~~~~~~~~~~~  129 (279)
                      .-|.|+||||||.||.
T Consensus        10 pcdqeikelennirka   25 (31)
T 2wh0_Q           10 PCDQEIKELENNIRKA   25 (31)
T ss_pred             chHHHHHHHHHHHHHH
Confidence            4689999999999985

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=88.79  E-value=1.1  Score=35.26  Aligned_cols=63  Identities=5%  Similarity=0.026  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      +..+..+|..+- .+..+.|+.+-...++..+.-..++ .+-.+-..+-...-|.||++||...+
T Consensus        72 ~~~~~~~~~~~D-~d~~g~i~~~Ef~~~~~~~~~~~~~-~~~~~F~~~D~d~~G~I~~~El~~~l  134 (180)
T 3mse_B           72 KWDINRILQALD-INDRGNITYTEFMAGCYRWKNIEST-FLKAAFNKIDKDEDGYISKSDIVSLV  134 (180)
T ss_dssp             HHHHHHHHHHHC-TTCCSEECHHHHHHHHSCCTTC--C-HHHHHHHHHCTTCSSCBCHHHHHHHT
T ss_pred             HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHhcccCCHH-HHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            344555555542 1222455555555555433222211 11111122333344556665555543

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=88.73  E-value=0.92  Score=33.02  Aligned_cols=63  Identities=13%  Similarity=0.019  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|+.|- .+..+.|+.+-+..++..+|++.+++.-  +-..+....-|.|+.+||+..|.
T Consensus         8 ~~~~~~~F~~~D-~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~   70 (92)
T 1fi6_A            8 RQYYVNQFKTIQ-PDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHHTTTC-CSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCCCCHHHHHHHHH
Confidence            456778888874 3345789999999999999976544333  22345556679999999999875

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=88.69  E-value=1.5  Score=33.52  Aligned_cols=62  Identities=5%  Similarity=0.098  Sum_probs=41.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..|- .+..+.|+.+-+..++..+|..+.+-.+-.+...+  ..-|.|+.++|+..+.
T Consensus        70 ~~~~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~  131 (165)
T 1k94_A           70 NAWKENFMTVD-QDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCV  131 (165)
T ss_dssp             HHHHHHHHHHC-TTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH
Confidence            45667777763 33346888888888888888776544433333333  5568888888887664

>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=88.66  E-value=0.2  Score=37.50  Aligned_cols=47  Identities=11%  Similarity=0.209  Sum_probs=42.1

Q ss_pred             ccCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         153 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       153 ~kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      ..|++++.+.|...+++ |-++..|++.|++.+-|+|.|+|=-|.++.
T Consensus        13 ~~ls~se~e~V~~LvsM-GFs~~qA~kALKat~~NvErAaDWLFSH~D   59 (63)
T 1wgn_A           13 QMLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHSG   59 (63)
T ss_dssp             HTCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred             HhhCcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            35899999999999865 799999999999999999999999997764

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=88.58  E-value=1.1  Score=34.72  Aligned_cols=65  Identities=15%  Similarity=0.247  Sum_probs=51.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++.  |..+.+-.+-.+...+....=|.|+.+||+.-|..
T Consensus       121 ~~~~~~~~F~~~-D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  185 (191)
T 3khe_A          121 SRERLLAAFQQF-DSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK  185 (191)
T ss_dssp             CHHHHHHHHHHH-CTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH-CCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            456789999998 434457999999999999  66666666666666777777799999999998764

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=88.54  E-value=0.72  Score=31.02  Aligned_cols=68  Identities=13%  Similarity=0.173  Sum_probs=47.5

Q ss_pred             CHHHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh-cCCCC-CcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPD-KILVEGIMKFLDD-LSLSP-ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD-~IgiDGiirlcED-LGVdP-EDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|-..+..+ .|+.+-+..++.. +|... .+..+-.+...+....-|.|+.++|+.-|..
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   75 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            3568899999995412346 8999999999985 88543 2222223334556667799999999998764

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=88.47  E-value=0.81  Score=37.06  Aligned_cols=63  Identities=10%  Similarity=0.203  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ..|.++|..| |.+..+.|+.+-+...+..+|..+....+-.+...+....-|.|+.+||+..+
T Consensus        57 ~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~  119 (197)
T 3pm8_A           57 NNLRNIFIAL-DVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT  119 (197)
T ss_dssp             HHHHHHHHHH-CTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTT
T ss_pred             HHHHHHHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            4555666665 22233567777777777766666655555555555555555667777776654

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=88.34  E-value=0.6  Score=37.38  Aligned_cols=65  Identities=8%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCC--CCCcHHHHHHH-------HhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL--SPESKLVLIIA-------WRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGV--dPEDvv~LVLA-------wkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+++.++|+.|- .+..+.|+.+-+..++..+|.  .|.+..+-.+.       ..+....-|.|+.+||+..|.
T Consensus        35 ~~~l~~~F~~~D-~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~  108 (208)
T 2hpk_A           35 LSRLYKRFDTFD-LDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR  108 (208)
T ss_dssp             -CHHHHHHHHHC-TTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            357888999884 344578999999999999998  77665555555       667777789999999999874

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=88.29  E-value=1.3  Score=35.28  Aligned_cols=66  Identities=14%  Similarity=0.112  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+++.++|+.|-. +..+.|+.+-+..++..+|..+..-.+-.+...+....-|.|+.+||+..|.
T Consensus        25 ~~~~l~~~F~~~D~-d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~   90 (191)
T 1y1x_A           25 DNQELMEWFRAVDT-DGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHH   90 (191)
T ss_dssp             TTSCHHHHHHHHCT-TCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            45689999999832 2346899999999998888888776666677777777889999999998764

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=88.28  E-value=1  Score=37.35  Aligned_cols=65  Identities=11%  Similarity=0.043  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|+.+-. +..+.|+.+-+...+..+|..+.+..+-.+...+....-|.++.+||+..|.
T Consensus        50 ~~~l~~~F~~~D~-d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~  114 (220)
T 3sjs_A           50 YTRIYQWFMGVDR-DRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYK  114 (220)
T ss_dssp             HHHHHHHHHHHCT-TCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            3566677777632 3346888888888888888888777776677777777778888888887764

>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A

Probab=88.22  E-value=0.38  Score=33.00  Aligned_cols=37  Identities=8%  Similarity=0.058  Sum_probs=30.5

Q ss_pred             HHHHHHHHhhhCCC-HHHHHHHHHhCCCchhhhcccccc
Q psy9057         160 KDKVKRFISFTQTG-ELTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       160 kelVrQF~sITGAS-ek~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      .+.|++.+++ |-+ ...+++.|.+++||++.|++-.|.
T Consensus         8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~   45 (46)
T 2bwb_A            8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN   45 (46)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            3678888888 765 556799999999999999987764

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=88.13  E-value=3.2  Score=32.21  Aligned_cols=65  Identities=11%  Similarity=0.052  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+.
T Consensus        62 ~~~~~~~f~~~D~-d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~  126 (193)
T 1bjf_A           62 SKFAEHVFRTFDA-NGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQ  126 (193)
T ss_dssp             HHHHHHHHHHHCS-SCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHH
Confidence            4568889998843 3347899999999999888766544444444566677789999999998764

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=88.13  E-value=2.3  Score=33.01  Aligned_cols=66  Identities=11%  Similarity=0.077  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..+-. +..+.|+.+....++..++..+..-.+-.+-..+....-|.|+.+||+..+..
T Consensus        62 ~~~~~~~f~~~D~-d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~  127 (190)
T 1fpw_A           62 EDFANHLFTVFDK-DNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS  127 (190)
T ss_dssp             SHHHHHHHHTCCS-SCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCC-CCCCcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            3568888988743 34478999999999999988776555545555666777799999999987753

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=88.13  E-value=1.1  Score=36.11  Aligned_cols=66  Identities=5%  Similarity=-0.081  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++ .+|..+.+-.+-.+...+....=|.|+.++|+.-|..
T Consensus       124 ~~~~l~~~F~~~-D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~  189 (196)
T 3dtp_E          124 EEDVIVNAFNLF-DEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK  189 (196)
T ss_dssp             CHHHHHHHHHTT-CSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred             cHHHHHHHHHHH-CCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence            457888999998 44445799999999999 9998887766666666666667799999999988753

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=88.09  E-value=0.52  Score=33.91  Aligned_cols=65  Identities=11%  Similarity=0.117  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHhcCCCCCC-ccCHHHHHHHH-hhcCCCC--CcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPD-KILVEGIMKFL-DDLSLSP--ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD-~IgiDGiirlc-EDLGVdP--EDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|..+|..|-..+..+ .|+.+-+..++ ..+|..+  +++  -.+...+....-|.|+.+||+..|..
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~--~~l~~~~D~d~dG~I~~~EF~~~~~~   77 (93)
T 1xk4_A            9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGA--DVWFKELDINTDGAVNFQEFLILVIK   77 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCH--HHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHH--HHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            357888999986523346 89999999999 7888443  444  33334555666799999999988753

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=87.93  E-value=1.5  Score=33.96  Aligned_cols=62  Identities=13%  Similarity=0.294  Sum_probs=37.4

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..|- .+..+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.++|+..|.
T Consensus        78 ~~~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~  139 (173)
T 1alv_A           78 KWQAIYKQFD-VDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLV  139 (173)
T ss_dssp             HHHHHHHHHC-TTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH
Confidence            4556666663 223356777777777777777665544433434444 4557777777776553

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=87.86  E-value=2.6  Score=32.75  Aligned_cols=65  Identities=11%  Similarity=0.025  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+....-|.|+.+||...+.
T Consensus        62 ~~~~~~~f~~~D~-d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~  126 (190)
T 2l2e_A           62 SAFAEYVFNVFDA-DKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD  126 (190)
T ss_dssp             HHHHHHHHHHHCS-SSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHH
T ss_pred             cHHHHHHHHHhcC-CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHH
Confidence            4578889988843 3346899999999999998776554444444566667779999999998764

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=87.80  E-value=2.1  Score=32.24  Aligned_cols=61  Identities=15%  Similarity=0.196  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+..+|..|- .+..+.|+.+-+..++..+|+.|....+-.+.   . ..-|.|+.++|+..|.
T Consensus        17 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~   77 (156)
T 1wdc_B           17 IQEMKEAFSMID-VDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFS   77 (156)
T ss_dssp             HHHHHHHHHHHC-TTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---H-hCCCcCcHHHHHHHHH
Confidence            456777888874 33346899999999999999888755433332   1 2348888888887764

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=87.71  E-value=1.5  Score=33.79  Aligned_cols=62  Identities=13%  Similarity=0.259  Sum_probs=38.4

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+  ..-|.|+.+||+.-+.
T Consensus        72 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~  133 (167)
T 1gjy_A           72 NGWRQHFISF-DSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCV  133 (167)
T ss_dssp             HHHHHHHHHH-CTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHH
T ss_pred             HHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHH
Confidence            3566667766 333346788888888888777766544433333333  4557788888876553

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=87.68  E-value=2.6  Score=32.99  Aligned_cols=68  Identities=12%  Similarity=0.114  Sum_probs=51.2

Q ss_pred             CHHHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD-~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....|..+|..|-+.+..+ .|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..
T Consensus        20 ~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           20 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            3467888999996333333 8999999999976     777776655555666677777899999999987653

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=87.53  E-value=1.8  Score=32.83  Aligned_cols=64  Identities=13%  Similarity=0.181  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|- .+..+.|+.+-+.+++..+|++.+.  +-.+-..+....-|.|+.++|+.-|..
T Consensus       101 ~~~~~~~F~~~D-~d~~G~I~~~e~~~~l~~~g~~~~~--~~~~~~~~D~d~dg~i~~~ef~~~~~~  164 (176)
T 1nya_A          101 GPVVKGIVGMCD-KNADGQINADEFAAWLTALGMSKAE--AAEAFNQVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHHHHHHHHHTC-SSCCSEEEHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHhCCCHHH--HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            356788898874 3345789999999999999944333  333344556667799999999988764

>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=87.24  E-value=0.58  Score=35.45  Aligned_cols=40  Identities=8%  Similarity=0.144  Sum_probs=33.7

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         160 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       160 kelVrQF~sITGA-Sek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      .+.|++.+++ |- ++..+++.|.+++||++.|++-.|..+.
T Consensus        30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~   70 (74)
T 1vej_A           30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG   70 (74)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            4678999988 76 5666799999999999999999997653

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=87.02  E-value=2  Score=34.49  Aligned_cols=67  Identities=16%  Similarity=0.214  Sum_probs=50.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc-CCCCCcHHHHHH----HHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-SLSPESKLVLII----AWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL-GVdPEDvv~LVL----AwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|- .+..+.|+.+-+.+++..+ |..+.+-.+-.+    ...+....=|.|+.+||+..+..
T Consensus       111 ~~~~l~~~F~~~D-~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~  182 (208)
T 2ct9_A          111 RSNKLHFAFRLYD-LDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK  182 (208)
T ss_dssp             HHHHHHHHHHHHC-TTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHC-CCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            3568888999884 3445799999999999986 977765544333    44556667799999999987754

>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A

Probab=86.90  E-value=0.41  Score=38.69  Aligned_cols=41  Identities=7%  Similarity=0.155  Sum_probs=34.4

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      .+.|++.+++=-.++..+++.|.+++||++.||+..|..|.
T Consensus        67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~  107 (108)
T 2cwb_A           67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGA  107 (108)
T ss_dssp             HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence            56788888865556789999999999999999999997764

>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.88  E-value=0.44  Score=36.55  Aligned_cols=40  Identities=13%  Similarity=0.160  Sum_probs=35.6

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ..+.|++.+++ |-++..|++.|...+|+++.|++-.|.++
T Consensus        29 ~e~~i~~L~~M-GF~~~~a~~AL~~t~~nve~A~ewL~~~~   68 (83)
T 2dai_A           29 DEAALRQLTEM-GFPENRATKALQLNHMSVPQAMEWLIEHA   68 (83)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            45789999996 99999999999999999999999888654

>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*

Probab=86.80  E-value=0.4  Score=43.20  Aligned_cols=39  Identities=15%  Similarity=0.303  Sum_probs=34.5

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccccc
Q psy9057         158 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       158 ~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      .-+++|++|+++ |.++..|+..|.++|||++.|++.-|.
T Consensus       214 ~~~~~v~~l~~m-gf~~~~~~~al~~~nWd~~~A~e~L~~  252 (253)
T 3e46_A          214 EYTKKIENLCAA-GFDRNAVIVALSSKSWDVETATELLLS  252 (253)
T ss_dssp             HHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHhc
Confidence            446889999998 999999999999999999999986553

>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=86.80  E-value=0.57  Score=34.04  Aligned_cols=38  Identities=16%  Similarity=0.184  Sum_probs=34.3

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCC-chhhhccccccCC
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDW-KLDLASDNYFQNP  199 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanW-dLE~AvdaFF~nP  199 (279)
                      +.|++.+++ |-++..|++.|...+| |++.|++-.|..+
T Consensus        21 ~~i~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewL~~~~   59 (64)
T 2cpw_A           21 SALDVLLSM-GFPRARAQKALASTGGRSVQTACDWLFSHS   59 (64)
T ss_dssp             CHHHHHHHH-TCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred             HHHHHHHHc-CCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence            568999986 9999999999999999 9999999888765

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=86.68  E-value=0.74  Score=37.51  Aligned_cols=68  Identities=3%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             ccCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCc------HHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         209 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPES------KLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       209 s~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPED------vv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+.|..+|..|-. +..+.|+.+-+..++..||+.|..      ..+--+...+....-|.++.+||+..|.
T Consensus        12 ~~~~~~l~~~F~~~D~-d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~   85 (263)
T 2f33_A           12 LITASQFFEIWLHFDA-DGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLP   85 (263)
T ss_dssp             CCCHHHHHHHHHHHCT-TCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTT
T ss_pred             cccHHHHHHHHHHhCC-CCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            3456889999999953 334789999999999999877653      3444455567777889999999998874

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=86.68  E-value=0.86  Score=34.70  Aligned_cols=63  Identities=11%  Similarity=0.203  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcC----CCCCcHH-HH--------HHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS----LSPESKL-VL--------IIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLG----VdPEDvv-~L--------VLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+++.++|+.| |.+..+.|+.+-+...+..+|    ++|.+.. +-        .+...+.  .-|.|+.+||+..|.
T Consensus         5 ~~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~   80 (174)
T 1q80_A            5 VQKMKTYFNRI-DFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMK   80 (174)
T ss_dssp             HHHHHHHHHHH-CTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHhc-CCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHH
Confidence            46788999999 444457899999999999888    9998755 21        1222333  569999999998775

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=86.57  E-value=1.6  Score=33.48  Aligned_cols=64  Identities=13%  Similarity=0.045  Sum_probs=49.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+.++|+.|- .+..+.|+.+-+..++..+|++.+++.-+  -..+....-|.|+.+||+..|.
T Consensus        20 ~~~~~~~~F~~~D-~d~dG~Is~~el~~~l~~~gl~~~el~~i--~~~~D~d~dG~I~~~EF~~~m~   83 (110)
T 1iq3_A           20 QREYYVNQFRSLQ-PDPSSFISGSVAKNFFTKSKLSIPELSYI--WELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SHHHHHHHHHHHC-CSSSSEEEHHHHHHHCCSSSCSSCCHHHH--HHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC-CCCCCeEcHHHHHHHHHHcCCCHHHHHHH--HHHHcCCCCCcCcHHHHHHHHH
Confidence            5678999999984 33447899999999999999877665443  2345566679999999998875

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=86.49  E-value=1.4  Score=35.39  Aligned_cols=64  Identities=16%  Similarity=0.241  Sum_probs=51.4

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +.|.+.|+.| |.+..+.|+.+-+...+..||++|.+..+--+...+....-|.++-.+|+..+.
T Consensus        11 ~elk~~F~~~-D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~   74 (176)
T 2lhi_A           11 AEFKEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   74 (176)
T ss_dssp             GHHHHHHHTT-CSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHT
T ss_pred             HHHHHHHHHH-CCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHH
Confidence            5677888887 333447899999999999999999888877777777777888888888887653

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=86.49  E-value=1  Score=36.42  Aligned_cols=67  Identities=16%  Similarity=0.115  Sum_probs=50.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc--CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL--SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL--GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..| |.++.+.|+.+-+.+++..+  |..+.+-.+-.+...+....=|.|+.+||+.-|++
T Consensus       127 ~~~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          127 KKEVCLIPFKFF-DIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             SHHHHHHHHHHH-CTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             hHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            456888999988 44445799999999999998  66655555555566667777899999999998764

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=86.44  E-value=1.3  Score=34.28  Aligned_cols=107  Identities=10%  Similarity=0.063  Sum_probs=69.9

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCcccccc----------cCCccCHHHHHHHHHHhcCCCCCCc
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYKE----------QKSSVDRKKLESLYSKYKDASEPDK  230 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~~~~~s----------s~~s~~~kkLeaLFDkYkDpddpD~  230 (279)
                      +.+++++..|+.+++....+.+..+        .+  ++.|..+.          .........+..+|..|-. +..+.
T Consensus         4 ~el~~l~~~~~~s~~~i~~l~~~fd--------~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~-d~~g~   72 (183)
T 1s6c_A            4 EGLEQLEAQTNFTKRELQVLYRGFK--------NE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDT-TQTGS   72 (183)
T ss_dssp             --CHHHHHHSSCCHHHHHHHHHHHH--------HH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCT-TCSSC
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHH--------Hh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCC-CCCCc
Confidence            3467778889998888777666533        11  23333211          1122467788889988753 33468


Q ss_pred             cCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         231 ILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       231 IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      |+.+-...++..++..+..-.+-.+-..+-...-|.|+.+||...+..
T Consensus        73 i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  120 (183)
T 1s6c_A           73 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  120 (183)
T ss_dssp             EEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             EeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            999999999988876654444444444566677799999999987753

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=86.34  E-value=0.96  Score=34.27  Aligned_cols=63  Identities=11%  Similarity=0.179  Sum_probs=41.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+|++++.+..++  ..+....-|.|+.++|+.-+..
T Consensus        99 ~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~--~~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A           99 DHLFAAFTYF-DKDGSGYITPDELQQACEEFGVEDVRIEELM--RDVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             HHHHHHHHHH-CTTCSSSBCHHHHHHHTCC--------CCHH--HHHCTTCSSSBCHHHHHHHHC-
T ss_pred             HHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCHHHHHHHH--HHhCCCCCCcEeHHHHHHHHHh
Confidence            5788889988 4444578999999999999998876544332  3455566799999999987753

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=86.24  E-value=1.2  Score=35.96  Aligned_cols=66  Identities=9%  Similarity=0.201  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHh-hcCCC-C------CcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLD-DLSLS-P------ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcE-DLGVd-P------EDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|..+|..| |.+..+.|+.+-+...+. .+|.+ |      .+-.+-.+-..+....-|.|+.+||+..|..
T Consensus        97 ~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  170 (179)
T 3a8r_A           97 DNRLRTFFDMV-DKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ  170 (179)
T ss_dssp             HHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred             HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            46788899998 555557899999999998 89876 4      3333333444455666799999999998764

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=86.18  E-value=2.5  Score=30.87  Aligned_cols=64  Identities=6%  Similarity=0.079  Sum_probs=44.8

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhh-----cCCCCCcH-----------HHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDD-----LSLSPESK-----------LVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcED-----LGVdPEDv-----------v~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..| |.+..+.|+.+-+..++..     +|..+.+.           .+--+...+....=|.||.+||+..+.
T Consensus        21 ~~~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           21 NPKTFFILH-DINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             CHHHHHHHH-CSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHH-cCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            466778887 4444578999999999885     68776542           122233445566679999999999875


Q ss_pred             c
Q psy9057         278 E  278 (279)
Q Consensus       278 ~  278 (279)
                      .
T Consensus       100 ~  100 (103)
T 1snl_A          100 R  100 (103)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=86.03  E-value=1.5  Score=31.81  Aligned_cols=66  Identities=8%  Similarity=0.093  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh---cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD---LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD-~IgiDGiirlcED---LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|...|..|-+.+..+ .|+.+-+..++..   +|. +.+..+-.+...+....-|.|+-+||+..|..
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~   78 (92)
T 2kax_A            9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM   78 (92)
T ss_dssp             HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            357888999997455456 8999999999976   442 33333333444566677799999999987653

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=86.01  E-value=1.8  Score=31.91  Aligned_cols=67  Identities=10%  Similarity=0.176  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHhcCCCC-CCccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASE-PDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpdd-pD~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|..+|..|-+.++ .+.|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            3578889999962232 358999999999976     676665544444555667777899999999987753

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=85.66  E-value=3.7  Score=32.56  Aligned_cols=66  Identities=5%  Similarity=0.078  Sum_probs=49.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+-...-|.|++++|...+.
T Consensus        69 ~~~~~~~~f~~~D~-d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~  134 (207)
T 2d8n_A           69 PKAYAQHVFRSFDS-NLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVM  134 (207)
T ss_dssp             CHHHHHHHHHHHCT-TCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcC-CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            45788999998853 3347899999999999888655443444444566677789999999998765

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=85.42  E-value=1.1  Score=35.56  Aligned_cols=62  Identities=10%  Similarity=0.071  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      .+.|.++|+.|- .+..+.|+.+-+..+ ..||++|.   +-.+...+....-|.|+.+||+..|..
T Consensus        28 ~~~l~~~F~~~D-~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~   89 (202)
T 2bec_A           28 LLRLHHRFRALD-RNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAH   89 (202)
T ss_dssp             HHHHHHHHHHHC-SSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGG
T ss_pred             HHHHHHHHHHHC-CCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            356777788873 333478999999999 89999887   334445666667799999999998753

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=85.19  E-value=3  Score=31.59  Aligned_cols=64  Identities=14%  Similarity=0.098  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|- .+..+.|+.+-+.+++..+|++++.+..+  -..+....-|.|+.+||+..|..
T Consensus        93 ~~~~~~~F~~~D-~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A           93 EGPLPLFFRAVD-TNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HTHHHHHHHHHC-TTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHH
Confidence            357888898884 33347899999999999999876654433  33456667799999999998753

>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4

Probab=85.07  E-value=1.1  Score=31.50  Aligned_cols=39  Identities=15%  Similarity=0.197  Sum_probs=33.2

Q ss_pred             HHHHHHHHhh-hCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         160 KDKVKRFISF-TQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       160 kelVrQF~sI-TGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      .+.++..+++ ..++..+++.+|+++++|++.|++...+.
T Consensus         5 e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~   44 (49)
T 1otr_A            5 ESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE   44 (49)
T ss_dssp             HHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            4667777777 78899999999999999999999876644

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=85.04  E-value=2.3  Score=31.47  Aligned_cols=63  Identities=10%  Similarity=0.195  Sum_probs=36.7

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHh-hCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWR-FKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwk-L~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..+-. +..+.|+.+....++..+.........+..++. +-...-|.|++++|...+.
T Consensus        39 ~~~~~~~~~D~-~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~  102 (155)
T 3ll8_B           39 LVQRVIDIFDT-DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK  102 (155)
T ss_dssp             THHHHHHHHCT-TCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHCC-CCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            55666666532 223567777777777766655544444444443 3344557777777776654

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=84.94  E-value=0.84  Score=35.43  Aligned_cols=63  Identities=13%  Similarity=0.083  Sum_probs=33.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhc-----------CCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDL-----------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDL-----------GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ..+.++|..|- .+..+.|+.+-+..++..+           |..+.+..+-.+...+....-|.|+.+||+..|
T Consensus        40 ~~l~~~F~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~  113 (191)
T 3khe_A           40 KELTQIFRQLD-NNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVC  113 (191)
T ss_dssp             HHHHHHHHHHC-TTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            45666666652 2223456666666666555           444444444444444445555666666666554

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=84.93  E-value=0.27  Score=35.53  Aligned_cols=64  Identities=11%  Similarity=0.135  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.++|+..|+
T Consensus        41 ~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           41 SQLKEIFRIL-DNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             SSHHHHCSSS-CSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHHHHh-CCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            4577788877 44445789999999999888   6666544444444455666679999999998775

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=84.78  E-value=0.92  Score=36.20  Aligned_cols=64  Identities=11%  Similarity=0.089  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCC-----CCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-----SPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGV-----dPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .++|.+ |..+ |.+..+.|+.+-+..++..||+     .+..-.+-.+...+....-|.++.+||+..|.
T Consensus        32 ~~~l~~-F~~~-D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~  100 (198)
T 1juo_A           32 QDPLYG-YFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA  100 (198)
T ss_dssp             CCTTHH-HHHH-HHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             cHHHHH-HHHH-hCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHH
Confidence            356777 7776 3334478999999999999998     34555555666667777789999999998765

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=84.29  E-value=3.3  Score=32.96  Aligned_cols=61  Identities=10%  Similarity=0.184  Sum_probs=46.5

Q ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         215 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       215 LeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      +..+|..|- .+..+.|+.+-+.+++..+|++++++..+  ...+....=|.|+.+||+.-|..
T Consensus       130 ~~~~F~~~D-~d~~G~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~I~~~EF~~~~~~  190 (208)
T 2hpk_A          130 SNSYYDVLD-DDGDGTVDVDELKTMMKAFDVPQEAAYTF--FEKADTDKSGKLERTELVHLFRK  190 (208)
T ss_dssp             HHHHHHHHC-TTCSSSBCHHHHHHHHHHTTSCTTHHHHH--HHHHCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhC-CCCCCcCCHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHH
Confidence            788998884 33457899999999999999766655433  33455666799999999987753

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=84.02  E-value=2.4  Score=33.72  Aligned_cols=62  Identities=13%  Similarity=0.256  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.++|+..+.
T Consensus       103 ~~~~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~  164 (198)
T 1juo_A          103 NGWRQHFISF-DTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCV  164 (198)
T ss_dssp             HHHHHHHHTT-CTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHh-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH
Confidence            3455566655 333335677777777777777665444333333333  4457777777776553

>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1

Probab=83.96  E-value=0.49  Score=34.35  Aligned_cols=39  Identities=13%  Similarity=0.112  Sum_probs=34.2

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhC-CCchhhhccccccCC
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQN-DWKLDLASDNYFQNP  199 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaa-nWdLE~AvdaFF~nP  199 (279)
                      .+.|++++++ |-+...|++.|.+. +|+++.|++-.|..+
T Consensus        10 ~~~v~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewLl~~~   49 (64)
T 1whc_A           10 LTALESLIEM-GFPRGRAEKALALTGNQGIEAAMDWLMEHE   49 (64)
T ss_dssp             CCHHHHHHTT-TCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence            3578999996 99999999999999 799999999888654

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=83.86  E-value=4.5  Score=31.42  Aligned_cols=64  Identities=9%  Similarity=0.008  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|-. +..+.|+.+-+..++..+|++++.+.  .+-..+-...=|.|+.+||+..+..
T Consensus       108 ~~~~~~~F~~~D~-d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~  171 (191)
T 2ccm_A          108 TKYMNFMFDVNDT-SGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTE  171 (191)
T ss_dssp             HHHHHHHHHHHCT-TCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            4578889988743 33478999999999999996555433  3334555566799999999998753

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=83.62  E-value=0.83  Score=36.23  Aligned_cols=65  Identities=11%  Similarity=0.063  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+-...-|.|++++|...+..
T Consensus        52 ~~~~~~f~~~D~-d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~  116 (198)
T 2r2i_A           52 KYVEQMFETFDF-NKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKA  116 (198)
T ss_dssp             HHHHHHHHHHCT-TCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHCC-CCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            457888888743 33467888888888888887665444444444556667788999998887654

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=83.46  E-value=2.5  Score=35.52  Aligned_cols=66  Identities=11%  Similarity=0.048  Sum_probs=47.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+.
T Consensus       127 ~~~~~~~~f~~~D~-d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~  192 (256)
T 2jul_A          127 ATTYAHFLFNAFDA-DGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK  192 (256)
T ss_dssp             CHHHHHHHHHHSSC-SCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcc-CCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            45678888988743 3346899999999998887665443333334455566779999999998764

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=83.30  E-value=3.5  Score=33.44  Aligned_cols=66  Identities=17%  Similarity=0.236  Sum_probs=50.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc----CCCCCcHHHHH----HHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL----SLSPESKLVLI----IAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL----GVdPEDvv~LV----LAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+..+|..| |.+..+.|+.+-+..++..+    |..+.+..+--    +...+....-|.|+.++|+..|.
T Consensus       101 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~  174 (263)
T 2f33_A          101 SCEEFMKTWRKY-DTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLP  174 (263)
T ss_dssp             CHHHHHHHHTTS-STTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSC
T ss_pred             HHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence            457789999888 43445789999999999988    88886654432    44556666779999999998764

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=83.16  E-value=3.4  Score=31.73  Aligned_cols=58  Identities=10%  Similarity=0.082  Sum_probs=37.7

Q ss_pred             HHHhcCCCCCCccCHHHHHHHHhhcCC-----CCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         219 YSKYKDASEPDKILVEGIMKFLDDLSL-----SPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       219 FDkYkDpddpD~IgiDGiirlcEDLGV-----dPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      |..+ |.+..+.|+.+-+..++..||+     .+....+-.+...+....-|.++.+||+..|.
T Consensus         7 F~~~-D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~   69 (167)
T 1gjy_A            7 YFAS-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA   69 (167)
T ss_dssp             HHHH-HCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHH
T ss_pred             HHHH-HcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            4444 3333467888888888888887     34444455555566666678888888877654

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=83.11  E-value=1.3  Score=32.71  Aligned_cols=67  Identities=9%  Similarity=0.100  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHhh-----cCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD-~IgiDGiirlcED-----LGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|.++|..|-+.++.+ .|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..
T Consensus        11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~   83 (95)
T 2wcb_A           11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   83 (95)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            457888999996333334 8999999999876     676666555444555555666799999999987753

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=83.10  E-value=16  Score=29.07  Aligned_cols=123  Identities=13%  Similarity=0.140  Sum_probs=76.6

Q ss_pred             cCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCchhhhccccc----cCCccccc--------ccCCccCHHHH
Q psy9057         154 KLKSSQKDKVK-RFISF----TQ-TGELTAINCLSQNDWKLDLASDNYF----QNPSAYYK--------EQKSSVDRKKL  215 (279)
Q Consensus       154 kLss~QkelVr-QF~sI----TG-ASek~A~qyLkaanWdLE~AvdaFF----~nP~~~~~--------ss~~s~~~kkL  215 (279)
                      .++..+...++ .|..+    .| .+..+-..+|...+..+...+...|    .+..+..+        ..........+
T Consensus        45 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l  124 (191)
T 3k21_A           45 QSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLI  124 (191)
T ss_dssp             HCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCTTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHH
T ss_pred             HCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHH
Confidence            35666655554 45444    22 2777788888887776554444443    23333211        11223456788


Q ss_pred             HHHHHHhcCCCCCCccCHHHHHHHHhh--cCCCCCc--H-HHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         216 ESLYSKYKDASEPDKILVEGIMKFLDD--LSLSPES--K-LVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       216 eaLFDkYkDpddpD~IgiDGiirlcED--LGVdPED--v-v~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+|..| |.+..+.|+.+-+.+++..  .|..+.+  . .+-.+...+....=|.|+.+||+.-|+
T Consensus       125 ~~~F~~~-D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          125 YCAFRVF-DVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             HHHHHHH-STTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             HHHHHHh-CCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence            9999988 3334578999999999988  4444432  1 244455556667779999999998765

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=83.05  E-value=2.6  Score=34.93  Aligned_cols=107  Identities=9%  Similarity=0.053  Sum_probs=70.2

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCccccc---------cc-CCccCHHHHHHHHHHhcCCCCCCc
Q psy9057         161 DKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSAYYK---------EQ-KSSVDRKKLESLYSKYKDASEPDK  230 (279)
Q Consensus       161 elVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~~~~~---------ss-~~s~~~kkLeaLFDkYkDpddpD~  230 (279)
                      +.+++++..|+.++++-..+.+..+        ..  ++.+..+         .- ........+..+|..+-. +..+.
T Consensus        37 ~~l~~l~~~~~~s~~ei~~l~~~Fd--------~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~-d~~G~  105 (224)
T 1s1e_A           37 EGLEQLEAQTNFTKRELQVLYRGFK--------NE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDT-TQTGS  105 (224)
T ss_dssp             -CHHHHHHHSSCCHHHHHHHHHHHH--------HH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCT-TCSSC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHH--------hh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcC-CCCCc
Confidence            3477888889999988777666543        11  2333321         11 122466788889988743 33468


Q ss_pred             cCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         231 ILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       231 IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      |+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..
T Consensus       106 I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~  153 (224)
T 1s1e_A          106 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  153 (224)
T ss_dssp             BCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHH
T ss_pred             EeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHH
Confidence            999999999988875554333333334555667799999999987754

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=83.01  E-value=15  Score=28.68  Aligned_cols=66  Identities=20%  Similarity=0.190  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCcc------ccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAA------AQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~------sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+..++...+++++++.-++-..-....      .-|.|+.+||+.-|..
T Consensus       107 ~~~~~~~F~~~-D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          107 STFLKAAFNKI-DKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             -CHHHHHHHHH-CTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHH-CCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            36788999998 444457899999999999666666655443332222111      2299999999987753

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=82.95  E-value=2.8  Score=34.67  Aligned_cols=62  Identities=11%  Similarity=0.104  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..| |.+..+.|+.+-+.+++..+   |+.++++..  +-..+....-|.|+.+||+.-|.
T Consensus       133 ~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~--~~~~~D~d~dG~Is~~EF~~~~~  197 (226)
T 2lvv_A          133 FELTVMFDTM-DKDGSLLLELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEFSCWAV  197 (226)
T ss_dssp             HHHHHHHHHH-SCSSCCEECHHHHHHHHHHHHHHTCCCCSCHH--HHHHHCCSCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHH-cCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHH
Confidence            4788889888 33345789999999999888   999987433  33445566779999999998764

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=82.74  E-value=4.4  Score=33.37  Aligned_cols=66  Identities=15%  Similarity=0.158  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcC-------CCCCcHHHHH--HHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS-------LSPESKLVLI--IAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLG-------VdPEDvv~LV--LAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..++..+|..|- .+..+.|+.+-+.+++..+|       ++++++.-++  +...+....=|.|+.+||+..+..
T Consensus       128 ~~~l~~~F~~~D-~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  202 (214)
T 2l4h_A          128 DIKSHYAFRIFD-FDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  202 (214)
T ss_dssp             HHHHHHHHHHHC-TTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred             HHHHHHHHHHhC-CCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            458889999884 33457899999999998885       4455554332  444455666799999999998764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=82.66  E-value=2.6  Score=34.91  Aligned_cols=32  Identities=19%  Similarity=0.292  Sum_probs=23.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL  243 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL  243 (279)
                      ....+..+|..|- .+..+.|+.+-+.+++..+
T Consensus       123 ~~~~l~~~F~~~D-~d~dG~Is~~E~~~~l~~~  154 (224)
T 1s1e_A          123 VHEKLRWTFNLYD-INKDGYINKEEMMDIVKAI  154 (224)
T ss_dssp             HHHHHHHHHHHHC-TTCCSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc-CCCCCeECHHHHHHHHHHH
Confidence            4567888898874 3344789999998888765

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=82.44  E-value=4.2  Score=33.65  Aligned_cols=66  Identities=14%  Similarity=0.225  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc------------CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL------------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL------------GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|- .+..+.|+.+-+..++..+            |....+-.+-.+-..+....=|.||.+||+..++.
T Consensus       137 ~~~l~~~F~~~D-~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  214 (229)
T 3dd4_A          137 QEKLNWAFNLYD-INKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK  214 (229)
T ss_dssp             HHHHHHHHHHHC-TTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhC-CCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            467888998883 3344789999999999877            44443344444455666777899999999998764

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=82.36  E-value=2.3  Score=34.45  Aligned_cols=30  Identities=20%  Similarity=0.348  Sum_probs=14.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDD  242 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcED  242 (279)
                      .+..+..++..|-+  ..+.|+.+..++++..
T Consensus       113 ~~~~~~~l~~~~dd--~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A          113 SRELLHLVTLRYSD--SVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             CHHHHHHHHHHHSC--TTSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcC--CCCeEcHHHHHHHHHH
Confidence            34455555555441  1234555555555543

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=82.06  E-value=4.4  Score=31.33  Aligned_cols=67  Identities=9%  Similarity=0.083  Sum_probs=48.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..+-. +..+.|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..
T Consensus        61 ~~~~~~~~f~~~D~-d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~  127 (190)
T 1g8i_A           61 PTKFATFVFNVFDE-NKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA  127 (190)
T ss_dssp             THHHHHHHHHHHCT-TCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhc-CCCCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence            34678889998853 33468999999999988876664444444445566677799999999987653

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=81.93  E-value=3.3  Score=40.02  Aligned_cols=66  Identities=12%  Similarity=0.165  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+.++|..+- .+....|+.+-+..++..+|..+..-.+-.+...+....-|.++.+||+..|..
T Consensus       311 i~el~~~F~~fD-~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~  376 (450)
T 3sg6_A          311 IAEFKEAFSLFD-KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR  376 (450)
T ss_dssp             HHHHHHHHHHHC-TTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Confidence            367888888883 223468999999999999999988777777777777777799999999988864

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=81.28  E-value=3.4  Score=31.42  Aligned_cols=64  Identities=8%  Similarity=0.139  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|-. +..+.|+.+-+.+++..+|++.+++.-+.  ..+-...=|.|+.+||+..+..
T Consensus       104 ~~~~~~~F~~~D~-d~dG~Is~~E~~~~l~~~g~~~~~~~~~~--~~~D~d~dG~i~~~ef~~~~~~  167 (185)
T 2sas_A          104 QNRIPFLFKGMDV-SGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             HHHHHHHHHHHCT-TSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcC-CCCCeEcHHHHHHHHHHhCCCHHHHHHHH--HHhcCCCCCcCcHHHHHHHHHH
Confidence            4678889998843 33478999999999999998776654433  3345556799999999988753

>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.21  E-value=0.83  Score=34.10  Aligned_cols=40  Identities=3%  Similarity=-0.053  Sum_probs=34.4

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCC-CchhhhccccccCC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQND-WKLDLASDNYFQNP  199 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaan-WdLE~AvdaFF~nP  199 (279)
                      ..+.|++.+++ |-++..|++.|...+ |+++.|++-.|...
T Consensus         9 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~   49 (74)
T 2dag_A            9 DESVIIQLVEM-GFPMDACRKAVYYTGNSGAEAAMNWVMSHM   49 (74)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence            35779999996 999999999999998 58999999888643

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=81.14  E-value=18  Score=28.30  Aligned_cols=65  Identities=9%  Similarity=0.083  Sum_probs=48.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....|...|..| |.+..+.|+.+-+.+.+..+|..+.+-.+=-+-..+... =|.|+-++|++=|+
T Consensus        83 ~~~~l~~aF~~f-D~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~  147 (153)
T 3i5g_B           83 PEDALRNAFSMF-DEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKG  147 (153)
T ss_dssp             CHHHHHHHHHTT-CSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHH
T ss_pred             cHHHHHHHHhcc-ccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhc
Confidence            457899999888 444557999999999999999887665544443334333 59999999998665

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=80.81  E-value=2.5  Score=33.56  Aligned_cols=68  Identities=9%  Similarity=0.133  Sum_probs=50.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCC-CCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS-PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVd-PEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|...+..+.|+.+-+..++..++.. +....+--+-..+....-|.|+.+||+..|..
T Consensus        31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~   99 (207)
T 2d8n_A           31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHM   99 (207)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHH
Confidence            567888888887532123689999999999999876 44444555555667777899999999988753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=80.56  E-value=2.1  Score=39.31  Aligned_cols=67  Identities=16%  Similarity=0.263  Sum_probs=36.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|+.| |.+..+.|+.+-+..++..+|..+.+-.+--+-..+....=|.|+.+||+.-|..
T Consensus       415 ~~~~~~~~F~~~-D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  481 (486)
T 3mwu_A          415 SRERMERAFKMF-DKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN  481 (486)
T ss_dssp             CHHHHHHHHHHH-CSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            567899999998 4444578999999999999997665544444444445556699999999998764

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=80.35  E-value=2.8  Score=32.33  Aligned_cols=55  Identities=15%  Similarity=0.199  Sum_probs=39.6

Q ss_pred             CCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         224 DASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       224 DpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      |.+..+.|+.+-+.+++..+|....+-.+-.+-..+-...=|.|+.++|+..+..
T Consensus       112 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~  166 (186)
T 2hps_A          112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND  166 (186)
T ss_dssp             CTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            5555578999999999988886555544444555556666789999999887653

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=80.20  E-value=3.1  Score=30.92  Aligned_cols=58  Identities=12%  Similarity=0.153  Sum_probs=29.6

Q ss_pred             HHHHHHHHhcCCCC-CCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         214 KLESLYSKYKDASE-PDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       214 kLeaLFDkYkDpdd-pD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      .+..+|..|-. +. .+.|+.+-+...+..+|+.|.+..+-.+...+...    |+.++|+..|
T Consensus        15 ~l~~~F~~~D~-d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~   73 (146)
T 2qac_A           15 DESDVRIYFNE-KSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYL   73 (146)
T ss_dssp             CHHHHHHHHHH-HCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHH
T ss_pred             HHHHHHHHhCc-cCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHH
Confidence            34555555532 12 24666666666666666666554444433333332    5555554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	279
d1v92a_	46	a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-	9e-07

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 46

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (101), Expect = 9e-07
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 155 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 198
           +   ++D ++ F++ T   E  A   L    W L +A  +++++
Sbjct: 1   MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	279
d1v92a_	46	NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {	99.38
d1oaia_	59	FG-binding, C-terminal domain of TAP {Human (Homo	97.77
d2g3qa1	43	Endocytic protein Ede1, YBL047C {Saccharomyces cer	96.23
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	96.1
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.8
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	95.3
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	94.65
d1xb2b1	56	Elongation factor Ts (EF-Ts), N-terminal domain {C	94.38
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	94.36
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	94.27
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	93.9
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	93.23
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	93.07
d1oqya1	41	DNA repair protein Hhr23a {Human (Homo sapiens) [T	92.9
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	92.73
d1aipc1	52	Elongation factor Ts (EF-Ts), N-terminal domain {T	92.53
d1wj7a1	91	Ubiquitin-associated protein 2-like Ubap2l {Mouse	92.42
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	92.24
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	92.02
d1efub3	54	Elongation factor Ts (EF-Ts), N-terminal domain {E	91.74
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	91.55
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	91.06
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	91.03
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	90.73
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	90.35
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	90.27
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	90.15
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	90.14
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	89.83
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	89.73
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	89.22
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	89.14
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	89.0
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	88.9
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	88.58
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	88.29
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	88.28
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	88.24
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	88.0
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	87.91
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	87.78
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	87.49
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	87.42
d1wgna_	63	Ubiquitin-associated protein 1, UBAP1 {Human (Homo	87.1
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	86.85
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	86.81
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	86.23
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	86.02
d1vg5a_	73	Rhomboid family protein At3g58460 {Thale cress (Ar	85.67
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	85.37
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	84.86
d1wiva_	73	Ubiquitin isopeptidase T {Thale cress (Arabidopsis	84.7
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	84.49
d2jdia1	131	F1 ATP synthase alpha subunit, domain 3 {Cow (Bos	84.28
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	83.4
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	83.23
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	82.49
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	82.06
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	81.93
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	81.44
d1fx0a1	129	F1 ATP synthase alpha subunit, domain 3 {Spinach (	80.94
d1wjia_	63	Tudor domain containing protein 3, TDRD3 {Human (H	80.91
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	80.88
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	80.13

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=9.2e-14  Score=95.71  Aligned_cols=45  Identities=20%  Similarity=0.468  Sum_probs=42.0

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         155 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       155 Lss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ++++++++|.|||+|||+++++|++||++++|||+.||+.||++.
T Consensus         1 ma~~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~g   45 (46)
T d1v92a_           1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             CTTHHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             CCccHHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence            456789999999999999999999999999999999999999763

>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: FG-binding, C-terminal domain of TAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=8.1e-06  Score=58.14  Aligned_cols=42  Identities=17%  Similarity=0.390  Sum_probs=40.3

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         155 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       155 Lss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      |++.|.++|.+|+..||.+.+=+.+||+.++||++.|+..|-
T Consensus         3 ls~~Qq~mv~~~s~~T~mn~e~s~~cLe~~~Wd~~~A~~~F~   44 (59)
T d1oaia_           3 LSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFT   44 (59)
T ss_dssp             CCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            678899999999999999999999999999999999999995

>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Endocytic protein Ede1, YBL047C
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=96.23  E-value=0.0015  Score=44.02  Aligned_cols=37  Identities=22%  Similarity=0.326  Sum_probs=30.9

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccccc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ  197 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~  197 (279)
                      ...|++.+++ |-++++|++.|++++||++.|++.-.+
T Consensus         5 ~~ai~eL~~M-GF~e~~A~~AL~k~~wnleaAtN~LLd   41 (43)
T d2g3qa1           5 SLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLD   41 (43)
T ss_dssp             HHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred             HHHHHHHHhc-CCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            3567777775 889999999999999999999986543

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.10  E-value=0.0098  Score=40.38  Aligned_cols=64  Identities=13%  Similarity=0.202  Sum_probs=54.4

Q ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         215 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       215 LeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      +.++|+.| |.+..+.|+.+-+...+..+|..+.+-.+-.+-..+-...-|.|+.+||+..|+++
T Consensus         3 ~r~~F~~~-D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~   66 (67)
T d1tiza_           3 AKRVFEKF-DKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM   66 (67)
T ss_dssp             HHHHHHHH-CTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred             HHHHHHHH-CCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            45678888 33445799999999999999999998888888888888888999999999998764

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.80  E-value=0.022  Score=39.59  Aligned_cols=68  Identities=12%  Similarity=0.093  Sum_probs=59.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ....|..+|..|= .+..+.|+.+-+..++..||+.+.+-.+--+-..+....-|.|+-++|++-|+.+
T Consensus         7 ~eeel~~~F~~fD-~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_           7 SEEELANCFRIFD-KNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             CHHHHHHHHHHHC-CSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHc-CCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            5678999999994 3345799999999999999999998888888888888888999999999988764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=95.30  E-value=0.041  Score=38.61  Aligned_cols=67  Identities=13%  Similarity=0.130  Sum_probs=56.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....|.++|+.|=. +..+.|+.+-+...+..+|..+.+-.+-.+-..+....=|.|+-++|+.-|+.
T Consensus        13 ~ee~l~~~F~~~D~-d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          13 TEEELSDLFRMFDK-NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             CHHHHHHHHHHHCS-SCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHcC-CCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            46789999999843 44589999999999999999998777766767777777899999999998865

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.65  E-value=0.055  Score=36.32  Aligned_cols=61  Identities=10%  Similarity=0.168  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHH
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMN  274 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~  274 (279)
                      ..|..+|..| |++..+.|+.+-+.+.+..||..+.+..+-.+-..+....=|.|+-++|++
T Consensus         3 eel~~aF~~f-D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~   63 (65)
T d1fw4a_           3 EEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ   63 (65)
T ss_dssp             HHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHH
T ss_pred             HHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHH
Confidence            5688889988 445568999999999999999999988888888888888889999999986

>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Cow (Bos taurus), mitochondrial [TaxId: 9913]

Probab=94.38  E-value=0.018  Score=40.25  Aligned_cols=39  Identities=15%  Similarity=0.062  Sum_probs=35.1

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccc
Q psy9057         157 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNY  195 (279)
Q Consensus       157 s~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaF  195 (279)
                      +...++|.+....||++-..+...|..+|||++.|++-.
T Consensus         2 a~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~L   40 (56)
T d1xb2b1           2 ASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWL   40 (56)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             cccHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            445689999999999999999999999999999998743

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=94.36  E-value=0.076  Score=36.45  Aligned_cols=66  Identities=14%  Similarity=0.241  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...|.++|..|-. +....|+.+-+.+.+..+|..+.+..+-.+-..+-...-|.|+.++|++-|++
T Consensus         8 ~e~l~~~F~~~D~-d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           8 REEILKAFRLFDD-DNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             HHHHHHHHHHHCT-TCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcC-CCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            4578999999843 34579999999999999999998877777777777888899999999988764

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.27  E-value=0.034  Score=38.42  Aligned_cols=68  Identities=15%  Similarity=0.193  Sum_probs=51.8

Q ss_pred             CHHHHHHHHHHhcC-CCCCCccCHHHHHHHHhhcCCCCC--cHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKD-ASEPDKILVEGIMKFLDDLSLSPE--SKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkD-pddpD~IgiDGiirlcEDLGVdPE--Dvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ++..|.++|+.|.. .++.+.|+.+-+.+.+..||..+.  +..+--+-..+....-|.|+-+||+.-|.+
T Consensus         3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            46789999999953 333578999999999999987653  333444556677777899999999987654

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=93.90  E-value=0.086  Score=36.88  Aligned_cols=65  Identities=17%  Similarity=0.138  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      .+.+.++|+.|=. ++.+.|+.+-+...+..|| .|.+-.+--+-..+....-|.|+.+||+.-|..
T Consensus         5 ~~e~~~~F~~~D~-d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~   69 (81)
T d2opoa1           5 IADRERIFKRFDT-NGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   69 (81)
T ss_dssp             HHHHHHHHHHHCT-TCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCC-CCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4578889999854 3457999999999999999 576666667777788888899999999987653

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.049  Score=39.37  Aligned_cols=64  Identities=13%  Similarity=0.094  Sum_probs=49.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..++..++|+.+ |.+..+.|+.+-+..++..+|++.+.+.  .+-..+-...-|.++++||+..|+
T Consensus         8 e~~~~~~~F~~~-D~d~~G~is~~e~~~~l~~~~l~~~~l~--~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_           8 EKAKYDEIFLKT-DKDMDGFVSGLEVREIFLKTGLPSTLLA--HIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHTTTCCHHHHH--HHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHHHHH-CCCCCCCCcHHHHHHHHHhcCCCHHHHH--HHHHHhCCCCCCeEcHHHHHHHHH
Confidence            457888999996 5555679999999999999998655433  333455556779999999998774

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.07  E-value=0.18  Score=34.50  Aligned_cols=64  Identities=14%  Similarity=0.220  Sum_probs=53.7

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+..+|..|= .+..+.|+++.+...+..+|+.|.+-.+--+-..+....-|.|+.++|+.-|.
T Consensus        10 ~el~~~F~~~D-~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_          10 AEFKEAFALFD-KDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             HHHHHHHHHTC-TTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHc-CCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            45667788874 33457999999999999999999988887788888888889999999998774

>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DNA repair protein Hhr23a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.90  E-value=0.054  Score=35.21  Aligned_cols=37  Identities=8%  Similarity=0.021  Sum_probs=32.2

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccc
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF  196 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF  196 (279)
                      -.+.|++.++ .|-++..|++.|.+++||++.|++--|
T Consensus         4 ~e~~i~~L~~-MGF~~~~a~~AL~~~~~N~e~A~~~Ll   40 (41)
T d1oqya1           4 YETMLTEIMS-MGYERERVVAALRASYNNPHRAVEYLL   40 (41)
T ss_dssp             HHHHHHHHHT-TTCCSHHHHHHHHHSCSSTTHHHHTTT
T ss_pred             HHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            4577888888 589999999999999999999998544

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=92.73  E-value=0.28  Score=35.69  Aligned_cols=65  Identities=12%  Similarity=0.156  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|+.| |.+..+.|+.+-+..++..+|..+.+..+--+...+....=|.|+.++|++-+.
T Consensus        81 ~~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          81 EEELIEAFKVF-DRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHH-STTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            35788899988 333457899999999999999999888888888899888889999999998764

>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=92.53  E-value=0.064  Score=36.85  Aligned_cols=36  Identities=17%  Similarity=0.286  Sum_probs=33.1

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNY  195 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaF  195 (279)
                      -++|.+....||++-..+.+.|..+|||++.|++-.
T Consensus         3 ~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~L   38 (52)
T d1aipc1           3 MELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLL   38 (52)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            478999999999999999999999999999998643

>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.42  E-value=0.043  Score=41.76  Aligned_cols=45  Identities=16%  Similarity=0.229  Sum_probs=40.4

Q ss_pred             CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         156 KSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       156 ss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      .+.-+.+|.|.|++||+|+.+|.-.|-.++.|++.||+.-+...+
T Consensus        29 D~~i~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~~   73 (91)
T d1wj7a1          29 DADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNP   73 (91)
T ss_dssp             CHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCSS
T ss_pred             cHHHHHHHHHHHHHhCCCHHHHHHHHhcCCccHHHHHHHHHhcCC
Confidence            445578899999999999999999999999999999999997653

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.24  E-value=0.23  Score=32.80  Aligned_cols=60  Identities=12%  Similarity=0.158  Sum_probs=50.4

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHH
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMN  274 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~  274 (279)
                      .+.+.|..|=. +..+.|+.+-+.+.+..+|..+.+..+-.+...+....=|.|+-++|++
T Consensus         2 el~~aF~~fD~-~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDK-ESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCT-TCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCC-CCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            45667877743 3457999999999999999999998888888888888889999999985

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.18  Score=36.32  Aligned_cols=64  Identities=13%  Similarity=0.254  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..|.++|+.| |.+..+.|.++-+..++..+|..+....+.-+...+.....|.++.++|+..+.
T Consensus         6 ~elk~~F~~~-D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~   69 (141)
T d2obha1           6 QEIREAFDLF-DADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT   69 (141)
T ss_dssp             HHHHHHHHTT-CTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHH-cCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHH
Confidence            5788899998 444457999999999999999999998888888888888889999999998764

>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.74  E-value=0.078  Score=36.67  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=32.8

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccc
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNY  195 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaF  195 (279)
                      .++|.+....||++-..+...|..++||++.|++-.
T Consensus         5 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~L   40 (54)
T d1efub3           5 ASLVKELRERTGAGMMDCKKALTEANGDIELAIENM   40 (54)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            367999999999999999999999999999998643

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=91.55  E-value=0.5  Score=34.61  Aligned_cols=67  Identities=12%  Similarity=0.071  Sum_probs=49.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHH---HHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKL---VLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv---~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+|..+|..|- .+..+.|+.+-+..++..|+.+.+.+.   +=-+-..+-...-|.|+.+||+.-|++
T Consensus        38 ~~~~l~~~F~~~D-~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~a  107 (107)
T d2pvba_          38 SLDDVKKAFYVID-QDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA  107 (107)
T ss_dssp             CHHHHHHHHHHHC-TTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             CHHHHHHHHHhhc-cCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcC
Confidence            5678999999984 444689999999999999976544333   222233444566799999999987764

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=91.06  E-value=0.1  Score=37.07  Aligned_cols=63  Identities=10%  Similarity=0.070  Sum_probs=52.5

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      +.|..+|+.|=. +..+.|+++.+.+.+..||+.|.+-.+--+-..+....-|.|+.+||+..|
T Consensus        23 ~~l~~~F~~~D~-d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          23 GGLKELFKMIDT-DNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTHHHHHCT-TCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHcC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            346778888732 334799999999999999999998888888888888888999999999754

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=91.03  E-value=0.24  Score=33.49  Aligned_cols=65  Identities=9%  Similarity=0.082  Sum_probs=52.4

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCC-CcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSP-ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdP-EDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..|.++|..|-.. ..+.|+.+-+.+.+..+|..| .+-.+--+-..+-...-|.|+-+||+.=|++
T Consensus         2 eel~~~F~~~D~d-~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           2 EEILRAFKVFDAN-GDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHHSCS-GGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCC-CcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            4678899999543 357999999999999999986 5555556667788888899999999987653

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=90.73  E-value=0.33  Score=32.91  Aligned_cols=64  Identities=13%  Similarity=0.181  Sum_probs=53.3

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+.+.|+.|=.. ..+.|+.+.+...+..+|+.+.+-.+--+...+....-|.|+-++|+.-|.
T Consensus         8 ~el~~~F~~~D~d-~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           8 AEFKEAFSLFDKD-GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHHHTCTT-SSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            4566778887543 357999999999999999999887777777788888889999999998664

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.35  E-value=0.53  Score=32.56  Aligned_cols=63  Identities=11%  Similarity=0.179  Sum_probs=51.7

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+...|..|=. ++.+.|+++-+.+.+..+|+.+.+..+--+-..+....-|.|+-++|+.-|.
T Consensus        15 el~~~F~~~D~-d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~   77 (81)
T d1avsa_          15 EFKAAFDMFDA-DGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   77 (81)
T ss_dssp             HHHHHHHHHCT-TCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHcC-CCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            45566877743 3457999999999999999999988777777777777789999999998775

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.56  Score=32.06  Aligned_cols=64  Identities=6%  Similarity=0.073  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ...+.+.|..|= .+..+.|+.+-+.+.|..+|+.+.+..+-.|...+....-|.|+-.+|+.-+
T Consensus        19 ~~~l~~~F~~~D-~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFD-TMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHC-TTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            356777787773 3345799999999999999999999999999999999999999999999754

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.15  E-value=0.31  Score=37.54  Aligned_cols=68  Identities=12%  Similarity=0.247  Sum_probs=35.8

Q ss_pred             cCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         210 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       210 ~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ++.++|.+||.+|+.....+.|+.+-..+++..+|....+..+=.|-..+-...-|.|+-.||+.++.
T Consensus        18 ~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~   85 (189)
T d1jbaa_          18 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALN   85 (189)
T ss_dssp             HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHH
Confidence            34555666666654321124566666666665555555444444444555555556666666665553

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.14  E-value=0.24  Score=36.24  Aligned_cols=64  Identities=14%  Similarity=0.204  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..| |.+..+.|+.+-+.++|..+|++++.+..  +...+-...=|.++.+||+..|+.
T Consensus       101 ~~~~~~~F~~~-D~d~dG~Is~~E~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~i~~~Ef~~~~~~  164 (176)
T d1nyaa_         101 GPVVKGIVGMC-DKNADGQINADEFAAWLTALGMSKAEAAE--AFNQVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHHHHHHHHHT-CSSCCSEEEHHHHHHHHHHTTCCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHH-ccCCChhhhHHHHHHHHHhcCCcHHHHHH--HHHHHCCCCCCcEeHHHHHHHHHH
Confidence            45678889888 33345799999999999999998766543  344566667799999999998864

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.83  E-value=0.34  Score=35.93  Aligned_cols=64  Identities=13%  Similarity=0.042  Sum_probs=49.7

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..+.+.++|+.+ |++..+.|+.+-+..++...|++.+.+..+  -..+-...-|.++++||+-+|+
T Consensus        20 e~~~y~~lF~~~-D~d~~G~Is~~e~~~~l~~s~L~~~~L~~I--w~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          20 QREYYVNQFRSL-QPDPSSFISGSVAKNFFTKSKLSIPELSYI--WELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SHHHHHHHHHHH-CCSSSSEEEHHHHHHHCCSSSCSSCCHHHH--HHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-CCCcccchhHHHHHHHHHhhccchHHHHHH--HHHhccCCCCeECHHHHHHHHH
Confidence            567899999997 444457899999999999999988775542  2335566779999999998764

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=89.73  E-value=2.7  Score=30.61  Aligned_cols=66  Identities=12%  Similarity=0.193  Sum_probs=50.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....|...|..| |.+..+.|+.+-+.+.|..+|..+.+-.+--+...+.... |.|+-++|++-|+.
T Consensus        74 ~~~~l~~aF~~~-D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~~-G~I~y~eF~~~l~~  139 (142)
T d1wdcb_          74 SEETIRNAFAMF-DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMIKG  139 (142)
T ss_dssp             CHHHHHHHHHTT-CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEET-TEECHHHHHHHHHT
T ss_pred             hhhhHHHhhhhh-cccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCCC-CEEcHHHHHHHHhc
Confidence            357888899988 4344579999999999999998887665555555555443 99999999987753

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=89.22  E-value=0.3  Score=37.79  Aligned_cols=66  Identities=15%  Similarity=0.136  Sum_probs=56.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..++|.++|..+ |.+..+.|+.+-+...+..+|+.+.+..+-.|...+....-|.++.++|+..|.
T Consensus        16 ~~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~   81 (182)
T d1y1xa_          16 DNQELMEWFRAV-DTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHH   81 (182)
T ss_dssp             TTSCHHHHHHHH-CTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHH-cCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccc
Confidence            346899999998 444457999999999999999999988888888889888889999999998774

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=89.14  E-value=0.64  Score=33.68  Aligned_cols=64  Identities=11%  Similarity=0.172  Sum_probs=53.5

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +.|.++|+.|-.. ..+.|+.+.+..++..+|..+.+..+-.+-..+.+..-|.++-++|+..+.
T Consensus         9 ~~l~~~F~~~D~~-~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~   72 (146)
T d1exra_           9 AEFKEAFALFDKD-GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA   72 (146)
T ss_dssp             HHHHHHHHHHCTT-CSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHH
Confidence            4677778888543 347899999999999999999988888888888888899999999998764

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.00  E-value=0.87  Score=35.01  Aligned_cols=70  Identities=16%  Similarity=0.136  Sum_probs=53.9

Q ss_pred             CCccCHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcH-HHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         207 KSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESK-LVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       207 ~~s~~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDv-v~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ..-+++..|..+|+.+ |.+..+.|+.+-+.+.+..++..+.+. .+-.+-..+....-|.++.+||+.-|.
T Consensus        13 ~~~~~~~~L~~iF~~~-D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~   83 (181)
T d1hqva_          13 AALPDQSFLWNVFQRV-DKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK   83 (181)
T ss_dssp             CCCSCHHHHHHHHHHH-CTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHH-cCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhh
Confidence            4556889999999998 444457999999999999999876443 333444456677789999999998765

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.90  E-value=0.29  Score=34.12  Aligned_cols=68  Identities=18%  Similarity=0.268  Sum_probs=50.2

Q ss_pred             CHHHHHHHHHHhcCCC-CCCccCHHHHHHHHhhc--CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDAS-EPDKILVEGIMKFLDDL--SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpd-dpD~IgiDGiirlcEDL--GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....|..+|.+|.+.+ +.+.|+.+.+.+++..+  +..+..-.+=.+...+..-.=|.|.=+||+.-|.+
T Consensus         5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~   75 (78)
T d1cb1a_           5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            4689999999997654 34789999999999887  44333222334455666667799999999987764

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=88.58  E-value=0.59  Score=34.69  Aligned_cols=64  Identities=8%  Similarity=0.155  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ...+..+|..|= .+..+.|+.+-+..+|..+|++.+++..+.  ..+-...-|.|+.+||++-|+.
T Consensus       104 ~~~~~~~F~~~D-~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f--~~~D~d~dG~i~~~EF~~~~~~  167 (185)
T d2sasa_         104 QNRIPFLFKGMD-VSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             HHHHHHHHHHHC-TTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-cCCCccCCHHHHHHHHHHcCCCHHHHHHHH--HHcCCCCCCCCcHHHHHHHHHH
Confidence            456788888874 444579999999999999999988876543  3455556799999999987753

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=88.29  E-value=0.75  Score=34.37  Aligned_cols=65  Identities=11%  Similarity=0.039  Sum_probs=52.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ....+..+|..| |.+..+.|+.+-+.+++..+|+.+.+-.+-.+-..+-...=|.|+.+||++-+
T Consensus       103 ~~~~~~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~  167 (187)
T d1uhka1         103 IRIWGDALFDIV-DKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQH  167 (187)
T ss_dssp             HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHH-ccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            345677788877 33345799999999999999998877777777777878888999999998754

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=88.28  E-value=0.6  Score=33.66  Aligned_cols=66  Identities=11%  Similarity=0.089  Sum_probs=49.2

Q ss_pred             HHHHHHHHHhcCCC-CCCccCHHHHHHHHhhc-----CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDAS-EPDKILVEGIMKFLDDL-----SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpd-dpD~IgiDGiirlcEDL-----GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..|..+|.+|.+.+ +.+.|+.+.+.+++.++     +-.+.+-.+=-+-..+-.-.=|.|+-+||+.-|.+
T Consensus         9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~   80 (93)
T d3c1va1           9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   80 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence            46778999998765 34679999999999874     43444444455666677777899999999986654

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=88.24  E-value=1.2  Score=30.93  Aligned_cols=65  Identities=14%  Similarity=0.188  Sum_probs=51.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +.+.+.|+.|-..+..+.|++.-+.+.+..||+.|.+-.+--+-..+....-|.|+-++|+.=|.
T Consensus        15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~   79 (82)
T d1wrka1          15 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV   79 (82)
T ss_dssp             HHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            56677888885332235899999999999999999887777776777776779999999997553

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=88.00  E-value=1.3  Score=32.63  Aligned_cols=66  Identities=14%  Similarity=0.125  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhhcC
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL  279 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~L  279 (279)
                      ..+...|..| |.+..+.|..+-+.+++...|..+.+..+--|-..+....=|.|+-+||++=|+.|
T Consensus        96 ~~~~~aF~~~-D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  161 (162)
T d1topa_          96 EELANCFRIF-DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHH-CTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             HHHHHHHHHH-CCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence            4556678777 55556789999999999999999988877777777877778999999999877654

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.91  E-value=0.29  Score=34.82  Aligned_cols=63  Identities=13%  Similarity=0.016  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+...++|+.+ |.+..+.|+.+-+..++...|++.+.+.-  +-..+-...-|.++++||+-+|+
T Consensus         8 ~~~y~~~F~~~-D~d~~G~i~~~e~~~~l~~~~l~~~~l~~--i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           8 RQYYVNQFKTI-QPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHHTTT-CCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHh-CCCcccchhHHHHHHHHHHccCCHHHHHH--HHHHhCCCCCCeecHHHHHHHHH
Confidence            45677888887 33345789999999999999986543222  23344556669999999997764

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=87.78  E-value=0.87  Score=33.40  Aligned_cols=67  Identities=9%  Similarity=0.089  Sum_probs=50.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....|..+|..|= .++.+.|+.+-+..++..|   |..+.+-.+=.+-..+-...-|.|+.+||++-|++
T Consensus        39 ~~~~l~~~F~~~D-~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          39 TDAQVKEVFEILD-KDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CHHHHHHHHHHHC-TTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CHHHHHHHHhhhc-CCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            4568999999994 3445799999999988777   55666655555555666677799999999987753

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.49  E-value=0.34  Score=35.20  Aligned_cols=60  Identities=20%  Similarity=0.309  Sum_probs=44.2

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHH-hhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAw-kL~A~sMGeFTReEFv~Gwk  277 (279)
                      .-.++|+.+ |.++.+.|+.+-+.+++...|++.+.   |--.| ..-...-|.++++||+.+|+
T Consensus        12 ~y~~~F~~~-D~d~~G~i~~~e~~~~l~~s~L~~~~---L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          12 VYEKYYRQV-EAGNTGRVLALDAAAFLKKSGLPDLI---LGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             HHHHHHHHH-CCTTSSCCCSHHHHHHHHTSSSCHHH---HHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHH-CCCCCCcccHHHHHHHHHHcCCcHHH---HHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            455778876 54555789999999999999986443   33344 34455669999999998875

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.42  E-value=0.61  Score=34.08  Aligned_cols=65  Identities=12%  Similarity=0.161  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCcc--ccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAA--AQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~--sMGeFTReEFv~Gwk  277 (279)
                      ...+.+.|..| |.+..+.|+.+-+...+..||++|....+--+.......  ..|.++-++|+.-+.
T Consensus         3 ~eelke~F~~~-D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (145)
T d2mysc_           3 ADDFKEAFLLF-DRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQ   69 (145)
T ss_pred             HHHHHHHHHHH-cCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHh
Confidence            45778888888 334457899999999999999998765554444444333  358899999987653

>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 1, UBAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.10  E-value=0.2  Score=35.02  Aligned_cols=44  Identities=11%  Similarity=0.208  Sum_probs=38.6

Q ss_pred             cCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccC
Q psy9057         154 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN  198 (279)
Q Consensus       154 kLss~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~n  198 (279)
                      .+++...+.|.+.+++ |-++..|++.|..++||++.|++-.|.+
T Consensus        14 ~~~~~de~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~   57 (63)
T d1wgna_          14 MLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAH   57 (63)
T ss_dssp             TCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             cCCchhHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence            4666677889999987 8899999999999999999999988865

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=86.85  E-value=0.58  Score=33.26  Aligned_cols=66  Identities=14%  Similarity=0.101  Sum_probs=50.4

Q ss_pred             HHHHHHHHHhcCCCC-CCccCHHHHHHHHhhcCCC-----CCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         213 KKLESLYSKYKDASE-PDKILVEGIMKFLDDLSLS-----PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       213 kkLeaLFDkYkDpdd-pD~IgiDGiirlcEDLGVd-----PEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ..|.++|.+|.|.++ .+.|+.+-+.+.+..++..     +.+..+-.+...+-.-.=|.|+-+||+.-|..
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~   80 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            578889999987653 4789999999999887643     23344555666777778899999999876643

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.81  E-value=0.35  Score=34.86  Aligned_cols=63  Identities=14%  Similarity=0.129  Sum_probs=47.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ......++|+.+-+ . .+.|+.+-+..++...|++.+++.  -+-..+-...-|.++++||+-.++
T Consensus         8 e~~~y~~~F~~~D~-~-~G~i~~~el~~~l~~~gl~~~~L~--~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1           8 DKAKYDAIFDSLSP-V-NGFLSGDKVKPVLLNSKLPVDILG--RVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             HHHHHHHHHHHTCC-B-TTEEEHHHHHHHHTTSSCCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-C-CCceeHHHHHHHHHHcCCCHHHHH--HHHHHhcCCCCCeEcHHHHHHHHH
Confidence            45678899999863 3 378999999999999999765432  333455566779999999987654

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.23  E-value=0.93  Score=33.05  Aligned_cols=63  Identities=16%  Similarity=0.256  Sum_probs=42.6

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ..+.++|.+| |++..+.|+++-+...+..+|..|....+.-+.+.......+.++.++|+..+
T Consensus        10 ~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (146)
T d1lkja_          10 AEFKEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM   72 (146)
T ss_dssp             HHHHHHHHHH-CCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHH
T ss_pred             HHHHHHHHHH-CCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHH
Confidence            3455667776 44444677777777777777777777666666666666777777777776654

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=86.02  E-value=1.7  Score=31.81  Aligned_cols=67  Identities=10%  Similarity=0.060  Sum_probs=50.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhc---CCCCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDL---GVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|..|=. +..+.|+.+-+..++..|   |..+.+-.+=.+-..+-...=|.|+.+||+.-|.+
T Consensus        39 ~~~~~~~~F~~~D~-d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          39 SANDVKKVFKAIDA-DASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             CHHHHHHHHHHHCT-TCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             CHHHHHHHhhCccC-CCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            45678889999843 334799999999999888   55666655555555666667799999999987754

>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Rhomboid family protein At3g58460
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.67  E-value=0.29  Score=34.86  Aligned_cols=42  Identities=10%  Similarity=0.234  Sum_probs=36.2

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         157 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       157 s~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ....+.|++.+++ |-+...|++.|.+++||++.|++--|.++
T Consensus        27 ~~~ee~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Ll~~~   68 (73)
T d1vg5a_          27 AASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS   68 (73)
T ss_dssp             CCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             CcCHHHHHHHHHh-CCCHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            3446789998886 78999999999999999999999988764

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=85.37  E-value=0.87  Score=32.01  Aligned_cols=46  Identities=17%  Similarity=0.235  Sum_probs=18.2

Q ss_pred             ccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHh
Q psy9057         230 KILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNG  275 (279)
Q Consensus       230 ~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~G  275 (279)
                      .|+.+-+..++..+|..+.+-.+-.+-..+....-|.++.+||+..
T Consensus        16 ~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~   61 (134)
T d1jfja_          16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF   61 (134)
T ss_dssp             EEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHH
T ss_pred             CCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccc
Confidence            4444444444444444443333222223333333344444444443

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=84.86  E-value=1.5  Score=31.71  Aligned_cols=67  Identities=10%  Similarity=0.094  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCC---CCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS---PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVd---PEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|+.|-. ++.+.|+.+.+..++..|+..   +.+..+-.+-..+....=|.|+.+||+.-|++
T Consensus        39 ~~~~~~~~F~~~D~-d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          39 SADDVKKVFHILDK-DKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             CHHHHHHHHHHHST-TCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             CHHHHHHHhhcccC-CCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            45678889999853 345799999999999998764   34444555555666777899999999987753

>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin isopeptidase T
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.70  E-value=0.4  Score=34.13  Aligned_cols=42  Identities=21%  Similarity=0.231  Sum_probs=36.6

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCCc
Q psy9057         158 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS  200 (279)
Q Consensus       158 ~QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP~  200 (279)
                      ...+.|++.++ -|-+.+.|++.|..++||++.|++--|.++.
T Consensus        28 ~d~~~i~~L~~-MGF~~~~a~~AL~~~~~n~e~Av~~Lls~~~   69 (73)
T d1wiva_          28 IDQSSVDTLLS-FGFAEDVARKALKASGGDIEKATDWVFNNSG   69 (73)
T ss_dssp             SCHHHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence            34567899998 5899999999999999999999999998763

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.49  E-value=1  Score=32.87  Aligned_cols=66  Identities=12%  Similarity=0.180  Sum_probs=53.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ....+...|..|-. +..+.|+++-+.+++..+|..+.+-.+-.+...+....=|.|+-++|++-+.
T Consensus        79 ~~~~l~~~F~~~D~-~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          79 KTEDFVKAFQVFDK-ESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             CTHHHHHHHHTTCS-SSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             hHHHHHHHHHhhcc-ccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            34678888988843 3457899999999999999999877777777777777779999999998764

>d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Left-handed superhelix
superfamily: C-terminal domain of alpha and beta subunits of F1 ATP synthase
family: C-terminal domain of alpha and beta subunits of F1 ATP synthase
domain: F1 ATP synthase alpha subunit, domain 3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.28  E-value=0.78  Score=35.25  Aligned_cols=49  Identities=22%  Similarity=0.352  Sum_probs=42.4

Q ss_pred             hhhHHHHHHHHHhhhhHHHHHHHHHHhhh-hhHhhhHHHHHHHHhHHHhh
Q psy9057          24 VQQDFERKLISLLNSNIKALQKKLSEKCK-TDQHKQNLEKCMQKFKDTFQ   72 (279)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   72 (279)
                      --++||..|+..+++|-+.+-+++.+..+ +|..+..|.+.+..|+.+|+
T Consensus        81 ~I~~fe~~ll~~l~~~~~~~l~~I~~~~~l~de~~~~L~~ai~~f~~~F~  130 (131)
T d2jdia1          81 KITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGFE  130 (131)
T ss_dssp             GHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcc
Confidence            34689999999999999988888876544 88899999999999999986

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.40  E-value=2.7  Score=29.75  Aligned_cols=61  Identities=15%  Similarity=0.232  Sum_probs=51.8

Q ss_pred             HHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHH
Q psy9057         213 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMN  274 (279)
Q Consensus       213 kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~  274 (279)
                      ..+..+|..|-.. ..+.|+.+.+...|..+|+...+-.+-.+...+-...=|.|+.+||++
T Consensus        79 ~~l~~~f~~~d~~-~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~  139 (141)
T d2obha1          79 EEILKAFKLFDDD-ETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLR  139 (141)
T ss_dssp             HHHHHHHHHHCTT-CSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred             HHHHHHHHHhccc-CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHH
Confidence            5677778887543 347899999999999999999998888888888888889999999986

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.23  E-value=1.4  Score=33.11  Aligned_cols=35  Identities=14%  Similarity=0.297  Sum_probs=14.7

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCC
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL  245 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGV  245 (279)
                      +++.+..||.+|.+-+..+.|+.+-..+++..++.
T Consensus        11 t~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~   45 (178)
T d1s6ca_          11 TKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFP   45 (178)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHST
T ss_pred             CHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCC
Confidence            34444444444432111124444444444444443

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.49  E-value=1.3  Score=33.84  Aligned_cols=60  Identities=8%  Similarity=0.120  Sum_probs=26.2

Q ss_pred             HHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhh
Q psy9057         216 ESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM  276 (279)
Q Consensus       216 eaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gw  276 (279)
                      ..+|+.+-.. ..+.|+.+-....+..+.-.+.+-.+-.+-..+-...-|.|+++|+...+
T Consensus        63 ~~if~~~d~~-~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~  122 (187)
T d1g8ia_          63 TFVFNVFDEN-KDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV  122 (187)
T ss_dssp             HHHHHHHCTT-CSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHhCcC-CCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHH
Confidence            4455555322 22456555555555444333322222222223334445666666655443

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.06  E-value=2.1  Score=33.11  Aligned_cols=61  Identities=5%  Similarity=0.096  Sum_probs=35.6

Q ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         214 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       214 kLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      .+..+|..|-. +..+.|+.+-+...+.++|+++.+..+=.|.....  .=|.++-++|+..+.
T Consensus        71 ~~~~~F~~fD~-d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d--~~g~i~~~eFi~~~~  131 (165)
T d1k94a_          71 AWKENFMTVDQ-DGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCV  131 (165)
T ss_dssp             HHHHHHHHHCT-TCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC--BTTBCBHHHHHHHHH
T ss_pred             hhHHHHHHhCC-CCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC--CCCcCcHHHHHHHHH
Confidence            44555666532 23467777777777777777765544444433332  237777777776543

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.93  E-value=2  Score=31.15  Aligned_cols=67  Identities=7%  Similarity=0.095  Sum_probs=52.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCC---CCCcHHHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         211 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL---SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       211 ~~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGV---dPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      ....+..+|+.|-.. ..+.|+.+-+.+++..|+.   .+.+-.+-.+-..+-.-.=|.|+.+||+.-|++
T Consensus        39 ~~~~l~~~F~~~D~d-~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~s  108 (108)
T d1rroa_          39 SASQVKDIFRFIDND-QSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS  108 (108)
T ss_dssp             CHHHHHHHHHHHCTT-CSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHTC
T ss_pred             CHHHHHHHHhhhcCC-CCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            557889999999653 3479999999999998854   355555666666677777799999999998763

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=81.44  E-value=1.9  Score=32.24  Aligned_cols=65  Identities=11%  Similarity=0.125  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         212 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       212 ~kkLeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      ...+.++|..|= .+..+.|+.+-+.++|..+|+.+.+-.+-.+-..+-...=|.|+.+||++-|.
T Consensus       106 ~~~~~~~F~~~D-~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~  170 (189)
T d1qv0a_         106 REWGDAVFDIFD-KDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL  170 (189)
T ss_dssp             HHHHHHHHHHTC-----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-cCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            346677888874 33447999999999999999999887777777788888889999999987553

>d1fx0a1 a.69.1.1 (A:373-501) F1 ATP synthase alpha subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}

class: All alpha proteins
fold: Left-handed superhelix
superfamily: C-terminal domain of alpha and beta subunits of F1 ATP synthase
family: C-terminal domain of alpha and beta subunits of F1 ATP synthase
domain: F1 ATP synthase alpha subunit, domain 3
species: Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]

Probab=80.94  E-value=0.86  Score=35.01  Aligned_cols=47  Identities=17%  Similarity=0.258  Sum_probs=41.5

Q ss_pred             hhHHHHHHHHHhhhhHHHHHHHHHHhh-hhhHhhhHHHHHHHHhHHHh
Q psy9057          25 QQDFERKLISLLNSNIKALQKKLSEKC-KTDQHKQNLEKCMQKFKDTF   71 (279)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   71 (279)
                      -.+||..+++.++++...+-+++.+.+ -+|....-|.+++++|+.+|
T Consensus        82 I~~fe~~ll~~l~~~~~~il~~I~~~~~ltde~~~~L~~~i~~f~~~F  129 (129)
T d1fx0a1          82 VRKYLVELRTYVKTNKPEFQEIISSTKTFTEEAEALLKEAIQEQMERF  129 (129)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcC
Confidence            468999999999999999888888765 57788999999999999887

>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Tudor domain containing protein 3, TDRD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.91  E-value=0.55  Score=32.34  Aligned_cols=40  Identities=13%  Similarity=0.156  Sum_probs=35.8

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhccccccCC
Q psy9057         159 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP  199 (279)
Q Consensus       159 QkelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~nP  199 (279)
                      ..+.|++.+++ |-++..|++.|..++++++.|++--|.++
T Consensus         9 d~~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~~wL~~~~   48 (63)
T d1wjia_           9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            35778999988 99999999999999999999999888764

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.88  E-value=1.1  Score=34.41  Aligned_cols=106  Identities=11%  Similarity=0.054  Sum_probs=69.8

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCchhhhcccccc-CCcccccc---------cC-CccCHHHHHHHHHHhcCCCCC
Q psy9057         160 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ-NPSAYYKE---------QK-SSVDRKKLESLYSKYKDASEP  228 (279)
Q Consensus       160 kelVrQF~sITGASek~A~qyLkaanWdLE~AvdaFF~-nP~~~~~s---------s~-~s~~~kkLeaLFDkYkDpddp  228 (279)
                      ++.+++.+.-|+-++.+-..+.++           |.. .|.+..+.         -. ......-++.+|+.+-. +..
T Consensus        10 ~e~l~~l~~~t~fs~~Ei~~l~~~-----------F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~-~~~   77 (190)
T d1fpwa_          10 KDDLTCLKQSTYFDRREIQQWHKG-----------FLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDK-DNN   77 (190)
T ss_dssp             THHHHHHTTTCCSTHHHHHHHHHH-----------HHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCS-SCS
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHH-----------HHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCc-CCC
Confidence            456889999999998886655543           322 23332210         01 12223345788887743 334


Q ss_pred             CccCHHHHHHHHhhcCCCCCcHHHHHHHHhhCccccccccHHHHHHhhh
Q psy9057         229 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML  277 (279)
Q Consensus       229 D~IgiDGiirlcEDLGVdPEDvv~LVLAwkL~A~sMGeFTReEFv~Gwk  277 (279)
                      +.|+.+..+..+..++..+.+-.+-.+-..+-...-|.|+++|+..-++
T Consensus        78 G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~  126 (190)
T d1fpwa_          78 GFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA  126 (190)
T ss_dssp             SEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            6899999999999888877665555555666777889999999887654

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.13  E-value=1.5  Score=33.98  Aligned_cols=62  Identities=8%  Similarity=0.069  Sum_probs=45.1

Q ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHhhcCCCCCc----H-HHHHHHHhhCccccccccHHHHHHhhhc
Q psy9057         215 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPES----K-LVLIIAWRFKAAAQCEFSRDEFMNGMLE  278 (279)
Q Consensus       215 LeaLFDkYkDpddpD~IgiDGiirlcEDLGVdPED----v-v~LVLAwkL~A~sMGeFTReEFv~Gwk~  278 (279)
                      +-.+|+++++++  +.|+.+-+.+.+..+|+++..    + .+--+...+-...-|.++-+||+.-|..
T Consensus         2 ~~~~F~~~a~~d--G~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~   68 (165)
T d1k94a_           2 VYTYFSAVAGQD--GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA   68 (165)
T ss_dssp             HHHHHHHHHGGG--TSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHhcCCC--CCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhc
Confidence            346899998754  589999999999999998732    1 1223333456677799999999987753