Psyllid ID: psy9215

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRHIRDQEETALT
Secondary Structure (PSIPRED)
cEEEEEEccccEEEEccccccEEEEccEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
EEEEEEEccccccEcccccEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
VVINCVILKSLkynqatstfhqwrdnkqvyglnfsskedADSFARAMLYAVECnspklkwtrHIRDQEETALT
Flexible Loop (DISEMBL)
vvincvilkslkynqatstfhqwrdnkQVYGLNFSSKEDADSFARAMLYAVEcnspklkwtrhirdqeetalt
Low Complexity Region (SEG)
VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRHIRDQEETALT
Disordered region (IsUnstruct)
*VINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRH**********
Disordered Region (DISOPRED)
VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV**********************
Disordered Region (DISEMBL)
VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRHIRDQEETALT
Disordered Region (DISPRO)
VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRHIRDQEETALT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
Q03173	802	Protein enabled homolog O	yes	N/A	0.986	0.089	0.602	2e-18
Q8T4F7	980	Protein enabled OS=Drosop	no	N/A	0.794	0.059	0.706	4e-18
Q8N8S7	591	Protein enabled homolog O	yes	N/A	0.712	0.087	0.75	5e-17
Q64GL0	692	Ena/VASP-like protein OS=	N/A	N/A	0.698	0.073	0.686	7e-15
P70429	414	Ena/VASP-like protein OS=	no	N/A	0.698	0.123	0.705	1e-14
Q9UI08	416	Ena/VASP-like protein OS=	no	N/A	0.698	0.122	0.705	1e-14
Q5R896	422	Ena/VASP-like protein OS=	no	N/A	0.698	0.120	0.705	1e-14
P70460	375	Vasodilator-stimulated ph	no	N/A	0.712	0.138	0.653	6e-14
P50552	380	Vasodilator-stimulated ph	no	N/A	0.712	0.136	0.653	7e-14
O08719	393	Ena/VASP-like protein OS=	no	N/A	0.698	0.129	0.686	7e-14

>sp|Q03173|ENAH_MOUSE Protein enabled homolog OS=Mus musculus GN=Enah PE=1 SV=2

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC-NSPKLK 59
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E  NS +  
Sbjct: 58  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAA 117

Query: 60  WTRHIRDQEETAL 72
            ++    Q+ T L
Sbjct: 118 QSKVTATQDSTNL 130

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. ENAH induces the formation of F-actin rich outgrowths in fibroblasts. Acts synergistically with BAIAP2-alpha and downstream of NTN1 to promote filipodia formation. Required for actin-based mobility of Listeria monocytogenes.
Mus musculus (taxid: 10090)

>sp|Q8T4F7|ENA_DROME Protein enabled OS=Drosophila melanogaster GN=ena PE=1 SV=4

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/58 (70%), Positives = 51/58 (87%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKL 58
           VVINC ILK LKYNQAT+TFHQWRD+K VYGLNFSS+ DA++FARAM++A+E  S ++
Sbjct: 354 VVINCSILKGLKYNQATATFHQWRDSKFVYGLNFSSQNDAENFARAMMHALEVLSGRV 411

Functions, together with Abl, trio and fra, in a complex signaling network that regulates axon guidance at the CNS midline. Required in part for robo-mediated repulsive axon guidance. May be involved in lamellipodial dynamics.

Drosophila melanogaster (taxid: 7227)

>sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens GN=ENAH PE=1 SV=2

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct: 58  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. ENAH induces the formation of F-actin rich outgrowths in fibroblasts. Acts synergistically with BAIAP2-alpha and downstream of NTN1 to promote filipodia formation. Required for the actin-based mobility of Listeria monocytogenes.

Homo sapiens (taxid: 9606)

>sp|Q64GL0|EVL_XENLA Ena/VASP-like protein OS=Xenopus laevis GN=evl PE=2 SV=1

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/51 (68%), Positives = 44/51 (86%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV 51
           VVIN  ++K LKYNQAT TFHQWRD +QVYGLNF+SKE+A +F+ AML+A+
Sbjct: 59  VVINYSLVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFAL 109

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. Evl enhances actin nucleation and polymerization.

Xenopus laevis (taxid: 8355)

>sp|P70429|EVL_MOUSE Ena/VASP-like protein OS=Mus musculus GN=Evl PE=1 SV=2

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/51 (70%), Positives = 44/51 (86%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV 51
           VVIN  I+K LKYNQAT TFHQWRD +QVYGLNF+SKE+A +F+ AML+A+
Sbjct: 59  VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFAL 109

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. EVL enhances actin nucleation and polymerization. Required to transform actin polymerization into active movement for the propulsive force of Listeria monocytogenes.

Mus musculus (taxid: 10090)

>sp|Q9UI08|EVL_HUMAN Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/51 (70%), Positives = 44/51 (86%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV 51
           VVIN  I+K LKYNQAT TFHQWRD +QVYGLNF+SKE+A +F+ AML+A+
Sbjct: 59  VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFAL 109

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. EVL enhances actin nucleation and polymerization. Required to transform actin polymerization into active movement for the propulsive force of Listeria monocytogenes.

Homo sapiens (taxid: 9606)

>sp|Q5R896|EVL_PONAB Ena/VASP-like protein OS=Pongo abelii GN=EVL PE=2 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/51 (70%), Positives = 44/51 (86%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV 51
           VVIN  I+K LKYNQAT TFHQWRD +QVYGLNF+SKE+A +F+ AML+A+
Sbjct: 65  VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFAL 115

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. EVL enhances actin nucleation and polymerization. Required to transform actin polymerization into active movement for the propulsive force of Listeria monocytogenes.

Pongo abelii (taxid: 9601)

>sp|P70460|VASP_MOUSE Vasodilator-stimulated phosphoprotein OS=Mus musculus GN=Vasp PE=1 SV=4

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 40/52 (76%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I++ +KYNQAT  FHQWRD +QV+GLNF SKEDA  FA  M  A+E
Sbjct: 60  VVINCAIIRGVKYNQATPIFHQWRDARQVWGLNFGSKEDAIQFATGMANALE 111

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. VASP promotes actin filament elongation. It protects the barbed end of growing actin filaments against capping and increases the rate of actin polymerization in the presence of capping protein. VASP stimulates actin filament elongation by promoting the transfer of profilin-bound actin monomers onto the barbed end of growing actin filaments. Plays a role in actin-based mobility of Listeria monocytogenes in host cells. Regulates actin dynamics in platelets and plays an important role in regulating platelet aggregation.

Mus musculus (taxid: 10090)

>sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein OS=Homo sapiens GN=VASP PE=1 SV=3

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 40/52 (76%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I++ +KYNQAT  FHQWRD +QV+GLNF SKEDA  FA  M  A+E
Sbjct: 60  VVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALE 111

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. VASP promotes actin filament elongation. It protects the barbed end of growing actin filaments against capping and increases the rate of actin polymerization in the presence of capping protein. VASP stimulates actin filament elongation by promoting the transfer of profilin-bound actin monomers onto the barbed end of growing actin filaments. Plays a role in actin-based mobility of Listeria monocytogenes in host cells. Regulates actin dynamics in platelets and plays an important role in regulating platelet aggregation.

Homo sapiens (taxid: 9606)

>sp|O08719|EVL_RAT Ena/VASP-like protein OS=Rattus norvegicus GN=Evl PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/51 (68%), Positives = 43/51 (84%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV 51
           VVIN  I+K LKYNQAT TFHQWRD +QVYGLNF+SK +A +F+ AML+A+
Sbjct: 59  VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKGEATTFSNAMLFAL 109

Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. EVL enhances actin nucleation and polymerization. Required to transform actin polymerization into active movement for the propulsive force of Listeria monocytogenes.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
328723663	418	PREDICTED: hypothetical protein LOC10016	0.726	0.126	0.886	1e-21
328723661	430	PREDICTED: hypothetical protein LOC10016	0.712	0.120	0.903	2e-21
91079832	454	PREDICTED: similar to vasodilator-stimul	0.726	0.116	0.830	8e-20
443703689	111	hypothetical protein CAPTEDRAFT_87716, p	0.712	0.468	0.846	7e-19
307194686	599	Protein enabled [Harpegnathos saltator]	0.712	0.086	0.826	1e-18
307167949	797	Protein enabled [Camponotus floridanus]	0.712	0.065	0.826	4e-18
332021875	777	Protein enabled [Acromyrmex echinatior]	0.712	0.066	0.826	6e-18
340724011	769	PREDICTED: hypothetical protein LOC10064	0.712	0.067	0.826	9e-18
383854802	785	PREDICTED: uncharacterized protein LOC10	0.712	0.066	0.826	1e-17
241651020	334	vasodilator-stimulated phosphoprotein, p	0.712	0.155	0.788	1e-17

>gi|328723663|ref|XP_003247911.1| PREDICTED: hypothetical protein LOC100164896 isoform 2 [Acyrthosiphon pisum]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 51/53 (96%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC 53
           VVINCVILK+LKYNQAT+TFHQWRDNK VYGLNFSSKEDADSFARAM+YA+E 
Sbjct: 58  VVINCVILKTLKYNQATTTFHQWRDNKHVYGLNFSSKEDADSFARAMVYALEV 110

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723661|ref|XP_001943648.2| PREDICTED: hypothetical protein LOC100164896 isoform 1 [Acyrthosiphon pisum]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/52 (90%), Positives = 51/52 (98%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINCVILK+LKYNQAT+TFHQWRDNK VYGLNFSSKEDADSFARAM+YA+E
Sbjct: 58  VVINCVILKTLKYNQATTTFHQWRDNKHVYGLNFSSKEDADSFARAMVYALE 109

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079832|ref|XP_970236.1| PREDICTED: similar to vasodilator-stimulated phosphoprotein [Tribolium castaneum] gi|270003288|gb|EEZ99735.1| hypothetical protein TcasGA2_TC002504 [Tribolium castaneum]

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/53 (83%), Positives = 48/53 (90%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC 53
           VVINC ILK LKYNQAT+TFHQWRDNKQVYGLNFSSKEDAD FARAM +++E 
Sbjct: 90  VVINCAILKGLKYNQATATFHQWRDNKQVYGLNFSSKEDADLFARAMFHSLEV 142

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443703689|gb|ELU01124.1| hypothetical protein CAPTEDRAFT_87716, partial [Capitella teleta]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 47/52 (90%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC ILK LKYNQAT TFHQWRDN+QVYGLNFSSKEDAD FA+AML A+E
Sbjct: 57  VVINCAILKGLKYNQATPTFHQWRDNRQVYGLNFSSKEDADGFAQAMLTALE 108

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|307194686|gb|EFN76945.1| Protein enabled [Harpegnathos saltator]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           +VINC ILK LKYNQAT TFHQWRDNKQVYGLNFSSK+DAD+FARAML A++
Sbjct: 67  IVINCAILKGLKYNQATVTFHQWRDNKQVYGLNFSSKDDADAFARAMLQALD 118

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167949|gb|EFN61315.1| Protein enabled [Camponotus floridanus]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 1  VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
          +VINC ILK LKYNQAT TFHQWRDNKQVYGLNFSSK+DAD+FARAML A++
Sbjct: 45 IVINCAILKGLKYNQATVTFHQWRDNKQVYGLNFSSKDDADAFARAMLQALD 96

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021875|gb|EGI62211.1| Protein enabled [Acromyrmex echinatior]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 1  VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
          +VINC ILK LKYNQAT TFHQWRDNKQVYGLNFSSK+DAD+FARAML A++
Sbjct: 45 IVINCAILKGLKYNQATVTFHQWRDNKQVYGLNFSSKDDADAFARAMLQALD 96

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724011|ref|XP_003400379.1| PREDICTED: hypothetical protein LOC100647911 [Bombus terrestris]

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           +VINC ILK LKYNQAT TFHQWRDNKQVYGLNFSSK+DAD+FARAML A++
Sbjct: 58  IVINCAILKGLKYNQATVTFHQWRDNKQVYGLNFSSKDDADAFARAMLQALD 109

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854802|ref|XP_003702909.1| PREDICTED: uncharacterized protein LOC100875902 [Megachile rotundata]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           +VINC ILK LKYNQAT TFHQWRDNKQVYGLNFSSK+DAD+FARAML A++
Sbjct: 58  IVINCAILKGLKYNQATVTFHQWRDNKQVYGLNFSSKDDADAFARAMLQALD 109

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241651020|ref|XP_002411260.1| vasodilator-stimulated phosphoprotein, putative [Ixodes scapularis] gi|215503890|gb|EEC13384.1| vasodilator-stimulated phosphoprotein, putative [Ixodes scapularis]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/52 (78%), Positives = 48/52 (92%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC ILK+LKYNQAT+TFHQWRDN+ VYGLNFSSK+DA++FA AML A+E
Sbjct: 80  VVINCAILKTLKYNQATATFHQWRDNRTVYGLNFSSKDDAEAFAVAMLRAIE 131

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
ZFIN|ZDB-GENE-050320-93	115	zgc:103638 "zgc:103638" [Danio	0.712	0.452	0.75	8.6e-17
FB|FBgn0000578	980	ena "enabled" [Drosophila mela	0.794	0.059	0.706	1.2e-16
UNIPROTKB|F1N214	798	F1N214 "Uncharacterized protei	0.986	0.090	0.602	1.8e-16
MGI|MGI:108360	802	Enah "enabled homolog (Drosoph	0.986	0.089	0.602	1.9e-16
UNIPROTKB|Q9DEG2	513	avenaII "Uncharacterized prote	0.712	0.101	0.75	4.6e-16
UNIPROTKB|E1BYW0	515	ENAH "Uncharacterized protein"	0.712	0.100	0.75	4.7e-16
RGD|1307666	526	Enah "enabled homolog (Drosoph	0.712	0.098	0.75	4.9e-16
UNIPROTKB|O93263	550	ENAH "Avena" [Gallus gallus (t	0.712	0.094	0.75	5.4e-16
UNIPROTKB|E1BYV9	552	ENAH "Uncharacterized protein"	0.712	0.094	0.75	5.4e-16
UNIPROTKB|Q8N8S7	591	ENAH "Protein enabled homolog"	0.712	0.087	0.75	6.2e-16

ZFIN|ZDB-GENE-050320-93 zgc:103638 "zgc:103638" [Danio rerio (taxid:7955)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 39/52 (75%), Positives = 43/52 (82%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA  FA AM++A+E
Sbjct:    45 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDASVFASAMMHALE 96

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0000578 ena "enabled" [Drosophila melanogaster (taxid:7227)]

 Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 41/58 (70%), Positives = 51/58 (87%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKL 58
             VVINC ILK LKYNQAT+TFHQWRD+K VYGLNFSS+ DA++FARAM++A+E  S ++
Sbjct:   354 VVINCSILKGLKYNQATATFHQWRDSKFVYGLNFSSQNDAENFARAMMHALEVLSGRV 411

GO:0017124 "SH3 domain binding" evidence=IDA;IPI

GO:0007411 "axon guidance" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0007409 "axonogenesis" evidence=IMP

GO:0003779 "actin binding" evidence=ISS

GO:0003382 "epithelial cell morphogenesis" evidence=IGI

GO:0030424 "axon" evidence=IDA

GO:0007391 "dorsal closure" evidence=IGI;TAS

GO:0005912 "adherens junction" evidence=IDA

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0008064 "regulation of actin polymerization or depolymerization" evidence=TAS

GO:0005911 "cell-cell junction" evidence=IDA

GO:0007015 "actin filament organization" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0030027 "lamellipodium" evidence=IDA

GO:0007390 "germ-band shortening" evidence=IMP

GO:0008258 "head involution" evidence=IMP

GO:0051491 "positive regulation of filopodium assembly" evidence=IMP

GO:0032433 "filopodium tip" evidence=IDA

GO:0031252 "cell leading edge" evidence=IDA

GO:0007396 "suture of dorsal opening" evidence=IMP

GO:0007303 "cytoplasmic transport, nurse cell to oocyte" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0048749 "compound eye development" evidence=IGI

GO:0051489 "regulation of filopodium assembly" evidence=IMP

GO:0010591 "regulation of lamellipodium assembly" evidence=IMP

GO:0060288 "formation of a compartment boundary" evidence=IMP

GO:0035262 "gonad morphogenesis" evidence=IMP

UNIPROTKB|F1N214 F1N214 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 215 (80.7 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 44/73 (60%), Positives = 53/73 (72%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC-NSPKLK 59
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E  NS +  
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQETA 117

Query:    60 WTRHIRDQEETAL 72
              ++    Q+ T L
Sbjct:   118 QSKVTATQDSTNL 130

GO:0050699 "WW domain binding" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0008154 "actin polymerization or depolymerization" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0001725 "stress fiber" evidence=IEA

GO:0046907 "intracellular transport" evidence=IEA

MGI|MGI:108360 Enah "enabled homolog (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 215 (80.7 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 44/73 (60%), Positives = 53/73 (72%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC-NSPKLK 59
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E  NS +  
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAA 117

Query:    60 WTRHIRDQEETAL 72
              ++    Q+ T L
Sbjct:   118 QSKVTATQDSTNL 130

GO:0001725 "stress fiber" evidence=IDA

GO:0001843 "neural tube closure" evidence=IGI

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005522 "profilin binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005925 "focal adhesion" evidence=IDA

GO:0006928 "cellular component movement" evidence=IDA

GO:0007015 "actin filament organization" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0007411 "axon guidance" evidence=IGI;IMP

GO:0008154 "actin polymerization or depolymerization" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=TAS

GO:0017124 "SH3 domain binding" evidence=IDA

GO:0030027 "lamellipodium" evidence=IDA

GO:0030036 "actin cytoskeleton organization" evidence=IGI

GO:0030054 "cell junction" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0030175 "filopodium" evidence=IDA

GO:0042995 "cell projection" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0046907 "intracellular transport" evidence=IEA

GO:0050699 "WW domain binding" evidence=ISO

UNIPROTKB|Q9DEG2 avenaII "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 4.6e-16, P = 4.6e-16
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

GO:0046907 "intracellular transport" evidence=IEA

UNIPROTKB|E1BYW0 ENAH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

GO:0046907 "intracellular transport" evidence=IEA

RGD|1307666 Enah "enabled homolog (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 208 (78.3 bits), Expect = 4.9e-16, P = 4.9e-16
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct:    78 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 129

GO:0001725 "stress fiber" evidence=IEA;ISO

GO:0001843 "neural tube closure" evidence=IEA;ISO

GO:0005522 "profilin binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0005925 "focal adhesion" evidence=IEA;ISO

GO:0006928 "cellular component movement" evidence=ISO

GO:0007015 "actin filament organization" evidence=ISO

GO:0007411 "axon guidance" evidence=IEA;ISO

GO:0008154 "actin polymerization or depolymerization" evidence=IEA;ISO

GO:0017124 "SH3 domain binding" evidence=IEA;ISO

GO:0030027 "lamellipodium" evidence=IEA;ISO

GO:0030036 "actin cytoskeleton organization" evidence=ISO

GO:0030054 "cell junction" evidence=ISO

GO:0030175 "filopodium" evidence=IEA;ISO

GO:0046907 "intracellular transport" evidence=IEA

GO:0050699 "WW domain binding" evidence=IEA;ISO

UNIPROTKB|O93263 ENAH "Avena" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 5.4e-16, P = 5.4e-16
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

GO:0046907 "intracellular transport" evidence=IEA

UNIPROTKB|E1BYV9 ENAH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 5.4e-16, P = 5.4e-16
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

GO:0046907 "intracellular transport" evidence=IEA

UNIPROTKB|Q8N8S7 ENAH "Protein enabled homolog" [Homo sapiens (taxid:9606)]

 Score = 208 (78.3 bits), Expect = 6.2e-16, P = 6.2e-16
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:     1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
             VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct:    58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

GO:0046907 "intracellular transport" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0001725 "stress fiber" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0008154 "actin polymerization or depolymerization" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0050699 "WW domain binding" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0050852 "T cell receptor signaling pathway" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005925 "focal adhesion" evidence=IDA

GO:0030054 "cell junction" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q03173	ENAH_MOUSE	No assigned EC number	0.6027	0.9863	0.0897	yes	N/A
Q8N8S7	ENAH_HUMAN	No assigned EC number	0.75	0.7123	0.0879	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	73
cd01207	108	cd01207, EVH1_Ena_VASP-like, Enabled/VASP family E	4e-31
cd00837	102	cd00837, EVH1_family, EVH1 (Drosophila Enabled (En	2e-20
smart00461	106	smart00461, WH1, WASP homology region 1	6e-19
pfam00568	111	pfam00568, WH1, WH1 domain	4e-17
cd10574	113	cd10574, EVH1_SPRED-like, Sprouty-related EVH1 dom	4e-14
cd01206	109	cd01206, EVH1_Homer_Vesl, Homer/Vesl family protei	2e-05

>gnl|CDD|241243 cd01207, EVH1_Ena_VASP-like, Enabled/VASP family EVH1 domain

 Score =  103 bits (260), Expect = 4e-31
 Identities = 42/52 (80%), Positives = 48/52 (92%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I+K LKYNQAT TFHQWRD++QVYGLNFSSKEDAD+FA+AML A+E
Sbjct: 54  VVINCAIVKGLKYNQATPTFHQWRDSRQVYGLNFSSKEDADTFAQAMLLALE 105

Ena/VASP family includes proteins such as: Vasodilator-stimulated phosphoprotein (VASP), enabled gene product from Drosophila (Ena), mammalian enabled (Mena) and Ena/VASP-Like protein (EVL) localize to focal adhesions and to sites of actin filament dynamics. These proteins share a common modular organization with a highly conserved N- and C-terminal domains, termed Ena/VASP homology domains 1 and 2 (EVH1 and EVH2), that are separated by a central proline-rich domain. The EVH1 domain binds to other proteins at proline rich sequences. The majority of Ena-VASP type EVH1 domains recognize FPPPP motifs such as in the focal adhesion proteins zyxin and vinculin, and the ActA surface protein of Listeria monocytogenes, however the LIM3 domain of Tes lacks the FPPPP motif but still binds the EVH1 domain of Mena. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains. EVH2 mediates oligomerization within the family. The proline-rich region binds SH3 and WW domains as well as profilin, a protein that regulates actin filament dynamics. The EVH1 domains are part of the PH domain superamily. There are 5 EVH1 subfamilies: Enables/VASP, Homer/Vesl, WASP, Dcp1, and Spred. Ligands are known for three of the EVH1 subfamilies, all of which bind proline-rich sequences: the Enabled/VASP family binds to FPPPP peptides, the Homer/Vesl family binds PPxxF peptides, and the WASP family binds LPPPEP peptides. EVH1 has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains. Length = 108

>gnl|CDD|241234 cd00837, EVH1_family, EVH1 (Drosophila Enabled (Ena)/Vasodilator-stimulated phosphoprotein (VASP) homology 1) domain

 Score = 76.7 bits (189), Expect = 2e-20
 Identities = 32/50 (64%), Positives = 40/50 (80%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYA 50
           VVINC I K+L YN+AT TFHQW D++ V+GLNF+S+EDA  FARA+  A
Sbjct: 52  VVINCTIRKNLVYNKATQTFHQWADDRTVFGLNFASEEDARKFARAVREA 101

The EVH1 domains are part of the PH domain superfamily. EVH1 subfamilies include Enables/VASP, Homer/Vesl, WASP, and Spred. Ligands are known for three of the EVH1 subfamilies, all of which bind proline-rich sequences: the Enabled/VASP family binds to FPPPP peptides, the Homer/Vesl family binds PPxxF peptides, and the WASP family binds LPPPEP peptides. EVH1 has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains. Length = 102

>gnl|CDD|214674 smart00461, WH1, WASP homology region 1

 Score = 73.2 bits (180), Expect = 6e-19
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYA 50
           V+ N  + K+ KYNQAT TFHQW D+K VYGLNF+S+E+A  F + +L A
Sbjct: 56  VIWNQELYKNFKYNQATPTFHQWADDKCVYGLNFASEEEAKKFRKKVLKA 105

Region of the Wiskott-Aldrich syndrome protein (WASp) that contains point mutations in the majority of patients with WAS. Unknown function. Ena-like WH1 domains bind polyproline-containing peptides, and that Homer contains a WH1 domain. Length = 106

>gnl|CDD|144235 pfam00568, WH1, WH1 domain

 Score = 68.6 bits (168), Expect = 4e-17
 Identities = 22/47 (46%), Positives = 34/47 (72%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAM 47
           V+ N  I  +++YNQA   FH + D++ VYGLNF+S+E+A  FA+A+
Sbjct: 61  VIWNQEIYPNMEYNQARPFFHTFADSRCVYGLNFASEEEATKFAKAV 107

WASp Homology domain 1 (WH1) domain. WASP is the protein that is defective in Wiskott-Aldrich syndrome (WAS). The majority of point mutations occur within the amino- terminal WH1 domain. The metabotropic glutamate receptors mGluR1alpha and mGluR5 bind a protein called homer, which is a WH1 domain homologue. A subset of WH1 domains has been termed a "EVH1" domain and appear to bind a polyproline motif. Length = 111

>gnl|CDD|241310 cd10574, EVH1_SPRED-like, Sprouty-related EVH1 domain-containing-like proteins EVH1 domain

 Score = 61.2 bits (149), Expect = 4e-14
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ C + K L YN+   TFH WR  ++ +GL F S  DA +F R +  A+E
Sbjct: 58  VVLECTLRKDLVYNKVMPTFHHWRIGEKKFGLTFQSPADARAFDRGVRRALE 109

The Spred family has the following domains: an N-terminal EVH1 domain, a unique KBD (c-Kit kinase binding) domain which that is phosphorylated by the stem cell factor receptor c-Kit, and a C-terminal cysteine-rich SPR (Sprouty-related) domain which is involved in membrane localization. There are 3 Spred proteins: Spred1 which interacts with both Ras and Raf through its SPR domain; Spred2 which is the most abundant isoform; and Spred3 which has a non-functional KBD and maintains the inhibitory action on Raf. Legius syndrome is caused by heterozygous mutations in Spred1. Both EVH1 and SPR domains are involved in the inhibition of the MAP kinase pathway by Spred proteins. The specific function of the Spred2 EVH1 domain is unknown and there are no known interacting proteins to date. It is thought that its EVH1 domain will have a fourth distinct peptide binding mechanism within the EVH1 family. The EVH1 domains are part of the PH domain superamily. There are 5 EVH1 subfamilies: Enables/VASP, Homer/Vesl, WASP, Dcp1, and Spred. Ligands are known for three of the EVH1 subfamilies, all of which bind proline-rich sequences: the Enabled/VASP family binds to FPPPP peptides, the Homer/Vesl family binds PPxxF peptides, and the WASP family binds LPPPEP peptides. EVH1 has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains. Length = 113

>gnl|CDD|241242 cd01206, EVH1_Homer_Vesl, Homer/Vesl family proteins EVH1 domain

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 1  VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFA 44
           +IN  I  ++ + + +  F QW D++   VYGL F+S+++   FA
Sbjct: 53 AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEQELTKFA 98

Homer/Vesl proteins are synaptic scaffolding proteins, required for long-term potentiation, a form of synaptic plasticity thought to underlie memory formation. They contains an N-terminal EVH1 domain and bind to both neurotransmitter receptors, such as the metabotropic group 1 glutamate receptor (mGluR) and to other scaffolding proteins via PPXXF motifs, in order to target them to the synaptic junction. These mGluRs possess a long C-terminal intracellular tail that may be important for subcellular localization of the receptor. The C-terminus is also the site of binding by the immediate early gene (IEG), Homer 1a. In contrast to Homer 1a, other Homer members additionally encode a C-terminal coiled-coil (CC) domain and form multivalent complexes that bind group 1 mGluRs. Homer 1a competes with constitutively expressed CC-Homers to modify the association of group 1 mGluRs with CC-Homer complexes. Since Homer proteins are strikingly enriched at the postsynaptic density (PSD), these observations suggest a role for the Homer family in regulating synaptic metabotropic receptor function. PSD-Zip45 (also named Homer 1c/Vesl-1L) has an EVH1 domain with a longer alpha-helix and its linking part included in the conserved region of Homer 1 (CRH1) interacts with the EVH1 domain of the neighbour CRH1 molecule in the crystal, suggesting that the EVH1 domain recognizes the PPXXF motif found in the binding partners, and the SPLTP sequence (P-motif) in the linking region of the CRH1. The two types of binding are partly overlapped in the EVH1 domain, implying a mechanism to regulate multimerization of Homer 1 family proteins. Homer 2 and Homer 3 are negative regulators of T cell activation. They bind the nuclear factor of activated T cells (NFAT) and compete with calcineurin binding. NFAT plays a critical role in calcium-dependent signaling in other cell types, including muscle and neurons. Homer-NFAT binding is also antagonized by active serine-threonine kinase AKT, enhancing TCR signaling via calcineurin-dependent dephosphorylation of NFAT resulting in changes in cytokine expression and an increase in effector-memory T cell populations in Homer-deficient mice. The EVH1 domains are part of the PH domain superamily. There are 5 EVH1 subfamilies: Enables/VASP, Homer/Vesl, WASP, Dcp1, and Spred. Ligands are known for three of the EVH1 subfamilies, all of which bind proline-rich sequences: the Enabled/VASP family binds to FPPPP peptides, the Homer/Vesl family binds PPxxF peptides, and the WASP family binds LPPPEP peptides. EVH1 has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains. Length = 109

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
KOG4590|consensus	409		99.94
cd01206	111	Homer Homer type EVH1 domain. Homer type EVH1 doma	99.93
cd01207	111	Ena-Vasp Enabled-VASP-type homology (EVH1) domain.	99.92
smart00461	106	WH1 WASP homology region 1. Region of the Wiskott-	99.83
cd00837	104	EVH1 EVH1 (Enabled, Vasp-Homology) or WASP Homolog	99.8
PF00568	111	WH1: WH1 domain; InterPro: IPR000697 The EVH1 (WH1	99.75
cd01205	105	WASP WASP-type EVH1 domain. WASP-type EVH1 domain.	98.18
smart00160	130	RanBD Ran-binding domain. Domain of apporximately	97.85
cd00835	122	RanBD Ran-binding domain. Ran-binding domain; This	97.84
PF00638	122	Ran_BP1: RanBP1 domain; InterPro: IPR000156 Ran is	96.68
KOG3671|consensus	569		96.57

>KOG4590|consensus

Probab=99.94  E-value=5e-28  Score=188.02  Aligned_cols=65  Identities=54%  Similarity=0.827  Sum_probs=60.9

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCCCccchhhh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRHIR   65 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~~~~~~~~~   65 (73)
                      |||||.|.+||+||||||+||||||.++||||||+|++||+.|+++|+.|||.|.++.+-|.-++
T Consensus        47 vVlnC~I~kGlkYnkatptFHqWR~arqvyGLnFqs~~DA~~Fa~~~~~A~e~l~~g~~~p~~~~  111 (409)
T KOG4590|consen   47 VVLNCLILKGLKYNKATPTFHQWRDARQVYGLTFQSEQDARAFARGVPVAIEALSGGTPEPPPQP  111 (409)
T ss_pred             cccccccccCcceeecccchhhhhhhhhhhcccccChhhhhhhhhhhhhhhhhhccCCCCCCCcC
Confidence            79999999999999999999999999999999999999999999999999999998887664443

>cd01206 Homer Homer type EVH1 domain

Probab=99.93  E-value=6.5e-27  Score=156.20  Aligned_cols=53  Identities=32%  Similarity=0.643  Sum_probs=51.5

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCC--eEEeeecCCHHHHHHHHHHHHHHhHh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFARAMLYAVEC   53 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~--~vyGL~F~s~~da~~F~~~~~~Ale~   53 (73)
                      |||||+|.+||+|||+||+||||||.|  +||||||+|++||..|+.+|.+|+|.
T Consensus        55 ~iINc~i~~~~~y~kas~~FhQWrD~R~~tVyGLnF~Sk~ea~~F~~~f~~~~~~  109 (111)
T cd01206          55 AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEQQLTKFAEKFQEVKEA  109 (111)
T ss_pred             EEEeccccCCcceeecccccccccccccceeeecccCCHHHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999  99999999999999999999999985

Homer type EVH1 domain. Homer is a synaptic scaffolding protein, involved in neuronal signaling. It contains an EVH1 domain, which binds to both neurotransmitter receptors, such as the metabotropic glutamate receptor (mGluR) and to other scaffolding proteins via PPXXF motifs, in order to target them to the synaptic junction. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.

>cd01207 Ena-Vasp Enabled-VASP-type homology (EVH1) domain

Probab=99.92  E-value=1.4e-25  Score=149.23  Aligned_cols=55  Identities=73%  Similarity=1.094  Sum_probs=53.5

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNS   55 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~   55 (73)
                      |||||.|.++|+||+++|+||||||++++|||||+|++||++|.++|..||+.|+
T Consensus        57 ~v~e~~l~~~l~y~k~~p~Fh~w~~~~~v~GLnF~Se~eA~~F~~~v~~Al~~L~  111 (111)
T cd01207          57 VVINCAIVKGLKYNQATPTFHQWRDARQVYGLNFGSKEDATMFASAMLSALEVLN  111 (111)
T ss_pred             EEEEEEecCCceeeecCCcceeeecCCeEEeeccCCHHHHHHHHHHHHHHHHhhC
Confidence            5899999999999999999999999999999999999999999999999999984

Enabled-VASP-type homology (EVH1) domain. The EVH1 domain binds to other proteins at proline rich sequences. It is found in proteins involved in cytoskeletal reorganization such as Enabled and VASP. Ena-VASP type EVH1 domains specifically recognize FPPPP motifs in the focal adhesion proteins zyxin and vinculin, and the ActA surface protein of Listeria monocytogenes. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.

>smart00461 WH1 WASP homology region 1

Probab=99.83  E-value=7.8e-21  Score=123.30  Aligned_cols=51  Identities=55%  Similarity=0.903  Sum_probs=49.0

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV   51 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Al   51 (73)
                      |++||.|.+||+||+++|+||||++++.+|||||+|++||+.|.++|..|+
T Consensus        56 vv~e~ely~~~~y~~~~~~Fh~f~~~~~~~GLnF~se~EA~~F~~~v~~~~  106 (106)
T smart00461       56 VIWNQELYKNFKYNQATPTFHQWADDKCVYGLNFASEEEAKKFRKKVLKAL  106 (106)
T ss_pred             EEEEEeccCCCEEeecCCceEEEEeCCeEEEeecCCHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999999999999999999998874

Region of the Wiskott-Aldrich syndrome protein (WASp) that contains point mutations in the majority of patients with WAS. Unknown function. Ena-like WH1 domains bind polyproline-containing peptides, and that Homer contains a WH1 domain.

>cd00837 EVH1 EVH1 (Enabled, Vasp-Homology) or WASP Homology (WH1) domain

Probab=99.80  E-value=5.8e-20  Score=118.53  Aligned_cols=51  Identities=53%  Similarity=0.859  Sum_probs=48.9

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV   51 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Al   51 (73)
                      |++||.|.+||+|++++|+||+|++.+.+|||||.|++||+.|.++|..++
T Consensus        54 vv~~~~l~~~~~y~~~~~~Fh~w~~~~~~~GL~F~se~eA~~F~~~v~~~~  104 (104)
T cd00837          54 VIWNQEIYKGLKYTQATPFFHQWEDDNCVYGLNFASEEEAAQFRKKVLEAI  104 (104)
T ss_pred             EEEEEEecCCcEEeecCCeEEEEEcCCcEEEEeeCCHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999999999999999999998764

EVH1 (Enabled, Vasp-Homology) or WASP Homology (WH1) domain. The EVH1 domain binds to other proteins at proline rich sequences in either FPPPP or PPXXF motifs. It is found in the cytoskeletal reorganization proteins Enabled VASP, and WASP, and in the synaptic scaffolding protein Homer. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.

>PF00568 WH1: WH1 domain; InterPro: IPR000697 The EVH1 (WH1, RanBP1-WASP) domain is found in multi-domain proteins implicated in a diverse range of signalling, nuclear transport and cytoskeletal events

Probab=99.75  E-value=2.5e-18  Score=111.43  Aligned_cols=50  Identities=40%  Similarity=0.646  Sum_probs=47.2

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHH
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYA   50 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~A   50 (73)
                      +++||.|.++|.|++++|+||||++.+.+|||||.|++||+.|.+.|++|
T Consensus        61 ~v~e~~l~~~~~Y~~~~~~Fh~f~~~~~~~GLnF~se~eA~~F~~~v~~~  110 (111)
T PF00568_consen   61 VVWEQELYPGFVYTKARPFFHQFEDDDCVYGLNFASEEEADQFYKKVQEA  110 (111)
T ss_dssp             EEEEEEESTT-EEEEESSSEEEEEETTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEeEecCCCEEEeCCCcEEEEEeCCeEEEEecCCHHHHHHHHHHHhcc
Confidence            57999999999999999999999999999999999999999999999886

This domain of around 115 amino acids is present in species ranging from yeast to mammals. Many EVH1-containing proteins associate with actin-based structures and play a role in cytoskeletal organisation. EVH1 domains recognise and bind the proline-rich motif FPPPP with low-affinity, further interactions then form between flanking residues [][]. WASP family proteins contain a EVH1 (WH1) in their N-terminals which bind proline-rich sequences in the WASP interacting protein. Proteins of the RanBP1 family contain a WH1 domain in their N-terminal region, which seems to bind a different sequence motif present in the C-terminal part of RanGTP protein [,]. Tertiary structure of the WH1 domain of the Mena protein revealed structure similarities with the pleckstrin homology (PH) domain. The overall fold consists of a compact parallel beta-sandwich, closed along one edge by a long alpha-helix. A highly conserved cluster of three surface-exposed aromatic side-chains forms the recognition site for the molecules target ligands. [].; GO: 0005515 protein binding; PDB: 1I2H_A 1DDV_A 1DDW_A 1EGX_A 3SYX_A 1TJ6_B 1XOD_B 1EVH_A 1I7A_B 2JP2_A ....

>cd01205 WASP WASP-type EVH1 domain

Probab=98.18  E-value=5.2e-06  Score=54.91  Aligned_cols=49  Identities=24%  Similarity=0.533  Sum_probs=44.2

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHH
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLY   49 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~   49 (73)
                      |+-+--|..|+.|++..|.||-+.-.+-..||+|.+++||..|.+.+..
T Consensus        55 v~weqElY~~f~y~~~r~fFhtFe~d~c~~GL~Fade~EA~~F~k~v~~  103 (105)
T cd01205          55 IIWEQELYDNFEYQQPRPFFHTFEGDDCVVGLNFADETEAAEFRKKVLD  103 (105)
T ss_pred             EEEEEEcccCcEEccCCCcEEEEeccCcEEEEEECCHHHHHHHHHHHHh
Confidence            3556778899999999999999999999999999999999999987753

WASP-type EVH1 domain. Wiskott-Aldrich syndrome (WAS) is an X-linked recessive disease, characterized by eczema, immunodeficiency, and thrombocytopenia. The majority of patients with WAS, or a milder version of the disorder, X-linked thrombocytopenia (XLT), have point mutations in the EVH1 domain of WASP (Wiskott-Aldrich syndrome protein). WASP is an actin regulatory protein consisting of an N-terminal EVH1 domain, a basic region, a GTP binding domain, a proline rich region and a WH2 acidic region. Yeast members lack the GTP binding domain. WASP binds a 25 residue proline rich motif from the WASP Interacting Protein (WIP) via its N-terminal EVH1 domain.

>smart00160 RanBD Ran-binding domain

Probab=97.85  E-value=4.3e-05  Score=51.04  Aligned_cols=50  Identities=28%  Similarity=0.377  Sum_probs=40.8

Q ss_pred             CeEeeeeecCceeeeccCcceeeee-------C---CeEEeeecCCHHHHHHHHHHHHHH
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRD-------N---KQVYGLNFSSKEDADSFARAMLYA   50 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd-------~---~~vyGL~F~s~~da~~F~~~~~~A   50 (73)
                      |+|||.|.++|+|..+.+...-|..       .   ...|.+.|.++++|..|..+|..|
T Consensus        71 v~lN~~i~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~irfk~~e~a~~f~~~~~ea  130 (130)
T smart00160       71 VCANHPIFKSMTLKPLAGSNRALKWTPEDFADDIPKLVLYAVRFKTKEEADSFKNIFEEA  130 (130)
T ss_pred             EEeccEecCCcEEeecCCCcceEEEeeeecCCCCCceEEEEEEeCCHHHHHHHHHHHHhC
Confidence            5799999999999988765554432       1   267999999999999999998765

Domain of apporximately 150 residues that stabilises the GTP-bound form of Ran (the Ras-like nuclear small GTPase).

>cd00835 RanBD Ran-binding domain

Probab=97.84  E-value=5.6e-05  Score=49.39  Aligned_cols=51  Identities=22%  Similarity=0.378  Sum_probs=44.2

Q ss_pred             CeEeeeeecCceeeecc--Ccceeee--eC------CeEEeeecCCHHHHHHHHHHHHHHh
Q psy9215           1 VVINCVILKSLKYNQAT--STFHQWR--DN------KQVYGLNFSSKEDADSFARAMLYAV   51 (73)
Q Consensus         1 VviNc~I~~gl~Ynkat--p~FHqWr--d~------~~vyGL~F~s~~da~~F~~~~~~Al   51 (73)
                      |++|+.|.++|+|.++.  .++..|-  |.      ...|.|.|.++++|..|...|..|.
T Consensus        61 v~lN~~i~~~~~~~~~~~~~k~~~~~~~d~~~~~~~~~~~~lrfk~~~~a~~f~~~~~~~~  121 (122)
T cd00835          61 LCLNHKLVPGMKLQPMGNSDKSIVWAAMDFSDDEPKPETFAIRFKTEEIADEFKEAIEEAK  121 (122)
T ss_pred             EEEeeEecCCcEEeecCCCCcEEEEEeeecCCCCCcEEEEEEEECCHHHHHHHHHHHHHhh
Confidence            57999999999999998  7999995  21      2579999999999999999988764

Ran-binding domain; This domain of approximately 150 residues shares structural similarity to the PH domain, but lacks detectable sequence similarity. Ran is a Ras-like nuclear small GTPase, which regulates receptor-mediated transport between the nucleus and the cytoplasm. RanGTP hydrolysis is stimulated by RanGAP together with the Ran-binding domain containing acessory proteins RanBP1 and RanBP2. These accessory proteins stabilize the active GTP-bound form of Ran . The Ran-binding domain is found in multiple copies in Nuclear pore complex proteins.

>PF00638 Ran_BP1: RanBP1 domain; InterPro: IPR000156 Ran is an evolutionary conserved member of the Ras superfamily that regulates all receptor-mediated transport between the nucleus and the cytoplasm

Probab=96.68  E-value=0.011  Score=38.06  Aligned_cols=52  Identities=33%  Similarity=0.510  Sum_probs=37.6

Q ss_pred             CeEeeeeecCceeeec--cCcceee--ee---C---CeEEeeecCCHHHHHHHHHHHHHHhH
Q psy9215           1 VVINCVILKSLKYNQA--TSTFHQW--RD---N---KQVYGLNFSSKEDADSFARAMLYAVE   52 (73)
Q Consensus         1 VviNc~I~~gl~Ynka--tp~FHqW--rd---~---~~vyGL~F~s~~da~~F~~~~~~Ale   52 (73)
                      |+||+.|.++|+|...  +...-=|  .|   .   -..|-+.|.++++|..|...|..|.+
T Consensus        60 v~lN~~i~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~irf~~~e~a~~f~~~i~e~~~  121 (122)
T PF00638_consen   60 VLLNHPIFKGMKLKPMKGSEKSLVWTAIDYADEEGKPETYLIRFKSAEDADEFKKKIEEAKE  121 (122)
T ss_dssp             EEEEEE--TTC-EEESTTTTTEEEEEEEECTTSSSEEEEEEEE-SSHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEecCCceecccccCCcEEEEEeccccCCCCceEEEEEEECCHHHHHHHHHHHHHHhc
Confidence            5799999999999643  4556666  33   1   15799999999999999999998865

Ran Binding Protein 1 (RanBP1) has guanine nucleotide dissociation inhibitory activity, specific for the GTP form of Ran and also functions to stimulate Ran GTPase activating protein(GAP)-mediated GTP hydrolysis by Ran. RanBP1 contributes to maintaining the gradient of RanGTP across the nuclear envelope high (GDI activity) or the cytoplasmic levels of RanGTP low (GAP cofactor) []. All RanBP1 proteins contain an approx 150 amino acid residue Ran binding domain. Ran BP1 binds directly to RanGTP with high affinity. There are four sites of contact between Ran and the Ran binding domain. One of these involves binding of the C-terminal segment of Ran to a groove on the Ran binding domain that is analogous to the surface utilised in the EVH1-peptide interaction []. Nup358 contains four Ran binding domains. The structure of the first of these is known [].; GO: 0046907 intracellular transport; PDB: 2Y8F_A 2Y8G_B 2CRF_A 1XKE_A 1RRP_D 2EC1_A 3M1I_B 1K5D_E 3OAN_A 3N7C_A ....

>KOG3671|consensus

Probab=96.57  E-value=0.0025  Score=52.24  Aligned_cols=50  Identities=24%  Similarity=0.504  Sum_probs=43.4

Q ss_pred             eEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHh
Q psy9215           2 VINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV   51 (73)
Q Consensus         2 viNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Al   51 (73)
                      |-+.-|..+|.|++-..-||-+.-++.+-||||-+++||..|.+.+..-+
T Consensus        90 iWdqELY~nf~y~q~r~ffhtFegddc~aGLnF~~E~EA~~F~k~V~~r~  139 (569)
T KOG3671|consen   90 IWDQELYQNFEYRQPRTFFHTFEGDDCQAGLNFASEEEAQKFRKKVQDRI  139 (569)
T ss_pred             eehHHhhhhceeccCccceeeeccccceeeecccCHHHHHHHHHHHHHHh
Confidence            34556788999999999999999999999999999999999988766554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	73
2xqn_M	119	Complex Of The 2nd And 3rd Lim Domains Of Tes With		1e-18
2iyb_A	114	Structure Of Complex Between The 3rd Lim Domain Of		1e-18
1evh_A	112	Evh1 Domain From Murine Enabled In Complex With Act		1e-18
1qc6_A	130	Evh1 Domain From EnaVASP-Like Protein In Complex Wi		5e-16
1egx_A	115	Solution Structure Of The Ena-Vasp Homology 1 (Evh1		6e-16
1xod_A	118	Crystal Structure Of X. Tropicalis Spred1 Evh-1 Dom		8e-09
1tj6_A	118	Crystal Structure Of The Xenopus Tropicalis Spred1		1e-08
3syx_A	130	Crystal Structure Of The Wh1 Domain From Human Spro		4e-08
2jp2_A	126	Solution Structure And Resonance Assignment Of The		4e-07

>pdb|2XQN|M Chain M, Complex Of The 2nd And 3rd Lim Domains Of Tes With The Evh1 Domain Of Mena And The N-Terminal Domain Of Actin-Like Protein Arp7a Length = 119

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct: 61  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 112

>pdb|2IYB|A Chain A, Structure Of Complex Between The 3rd Lim Domain Of Tes And The Evh1 Domain Of Mena Length = 114

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct: 59  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 110

>pdb|1EVH|A Chain A, Evh1 Domain From Murine Enabled In Complex With Acta Peptide Length = 112

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct: 58  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

>pdb|1QC6|A Chain A, Evh1 Domain From EnaVASP-Like Protein In Complex With Acta Peptide Length = 130

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAV 51
           VVIN  I+K LKYNQAT TFHQWRD +QVYGLNF+SKE+A +F+ A L+A+
Sbjct: 59  VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAXLFAL 109

>pdb|1EGX|A Chain A, Solution Structure Of The Ena-Vasp Homology 1 (Evh1) Domain Of Human Vasodilator-Stimulated Phosphoprotein (Vasp) Length = 115

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 40/53 (75%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC 53
           VVINC I++ +KYNQAT  FHQWRD +QV+GLNF SKEDA  FA  M  A+E 
Sbjct: 60  VVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALEA 112

>pdb|1XOD|A Chain A, Crystal Structure Of X. Tropicalis Spred1 Evh-1 Domain Length = 118

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ CV+ + L YN+ T TFH WR   + +GL F S  DA +F R +  A+E
Sbjct: 62  VVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIE 113

>pdb|1TJ6|A Chain A, Crystal Structure Of The Xenopus Tropicalis Spred1 Evh-1 Domain Length = 118

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           V++ CV+ + L YN+ T TFH WR   + +GL F S  DA +F R +  A+E
Sbjct: 62  VILECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIE 113

>pdb|3SYX|A Chain A, Crystal Structure Of The Wh1 Domain From Human Sprouty-Related, Evh1 Domain-Containing Protein. Northeast Structural Genomics Consortium Target Hr5538b Length = 130

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ C++ K L YN+ T TFH W+ + + +GL F S  DA +F R +  A+E
Sbjct: 69  VVLECMLKKDLIYNKVTPTFHHWKIDDKKFGLTFQSPADARAFDRGIRRAIE 120

>pdb|2JP2|A Chain A, Solution Structure And Resonance Assignment Of The N- Terminal Evh1 Domain From The Human Spred2 Protein (Sprouty-Related Protein With Evh1 Domain Isoform 2) Length = 126

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ C + K L Y +A  TFH W+ + + +GL F S  DA +F R +  A+E
Sbjct: 71  VVLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIE 122

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	73
3syx_A	130	Sprouty-related, EVH1 domain-containing protein 1;	1e-23
2jp2_A	126	Spred-2, sprouty-related, EVH1 domain-containing p	1e-23
1egx_A	115	VAsp, vasodilator-stimulated phosphoprotein; EVH1,	3e-23
1xod_A	118	Spred1; sprouty, EVH1, peptide-binding, signaling	4e-23
1qc6_A	130	EVH1 domain from ENA/VAsp-like protein; AN incompl	3e-21
1evh_A	112	WH1 domain, protein (MENA EVH1 domain); molecular	3e-19
1i2h_A	168	PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology	6e-19
1ddw_A	120	GLGF-domain protein homer; pleckstrin homology dom	2e-18
2ifs_A	169	N-WAsp, wiskott-aldrich syndrome protien ineractin	5e-10
1mke_A	152	WIP - N-WAsp, fusion protein consisting of wiskott	7e-10
3n7c_A	130	ABR034WP; nuclear pore complex, NUP2, RAN-binding	6e-05

>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens} Length = 130

 Score = 85.5 bits (211), Expect = 1e-23
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ C++ K L YN+ T TFH W+ + + +GL F S  DA +F R +  A+E
Sbjct: 69  VVLECMLKKDLIYNKVTPTFHHWKIDDKKFGLTFQSPADARAFDRGIRRAIE 120

>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} Length = 126

 Score = 85.0 bits (210), Expect = 1e-23
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ C + K L Y +A  TFH W+ + + +GL F S  DA +F R +  A+E
Sbjct: 71  VVLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIE 122

>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4 Length = 115

 Score = 83.9 bits (207), Expect = 3e-23
 Identities = 34/52 (65%), Positives = 40/52 (76%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I++ +KYNQAT  FHQWRD +QV+GLNF SKEDA  FA  M  A+E
Sbjct: 60  VVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALE 111

>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A Length = 118

 Score = 83.9 bits (207), Expect = 4e-23
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ CV+ + L YN+ T TFH WR   + +GL F S  DA +F R +  A+E
Sbjct: 62  VVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIE 113

>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4 Length = 130

 Score = 79.4 bits (195), Expect = 3e-21
 Identities = 36/52 (69%), Positives = 44/52 (84%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVIN  I+K LKYNQAT TFHQWRD +QVYGLNF+SKE+A +F+ AML+A+ 
Sbjct: 59  VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALN 110

>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A Length = 112

 Score = 73.9 bits (181), Expect = 3e-19
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct: 58  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 109

>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4 Length = 168

 Score = 74.5 bits (182), Expect = 6e-19
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFARAMLYAVEC 53
            +IN  I  ++ + + +  F QW D++   VYGL FSS+     FA       E 
Sbjct: 60  AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEA 114

>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A* Length = 120

 Score = 71.7 bits (175), Expect = 2e-18
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFARAMLYAVEC 53
            +IN  I  ++ + + +  F QW D++   VYGL FSS+     FA       E 
Sbjct: 55  AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEA 109

>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens} Length = 169

 Score = 51.3 bits (122), Expect = 5e-10
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK 57
           ++    +  +  YN     FH +  +     LNF+++E+A  F +A+   +     K
Sbjct: 107 LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGRRQRK 163

>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4 Length = 152

 Score = 50.8 bits (121), Expect = 7e-10
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK 57
           ++    +  +  YN     FH +  +     LNF+++E+A  F +A+   +     K
Sbjct: 90  LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGRRQRK 146

>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A Length = 130

 Score = 37.2 bits (86), Expect = 6e-05
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 7/66 (10%)

Query: 1   VVINCVILKSLKY------NQATSTFHQWRDNK-QVYGLNFSSKEDADSFARAMLYAVEC 53
           V++N  ++KS KY      N+    +    D K + + +    K D      A+  A + 
Sbjct: 62  VLLNTSVVKSFKYQPIDADNENLIKWPIITDGKLETFIIKVKQKADGRRLVGAVADAQQA 121

Query: 54  NSPKLK 59
                 
Sbjct: 122 MEGHHH 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
3syx_A	130	Sprouty-related, EVH1 domain-containing protein 1;	99.97
1egx_A	115	VAsp, vasodilator-stimulated phosphoprotein; EVH1,	99.92
1xod_A	118	Spred1; sprouty, EVH1, peptide-binding, signaling	99.92
1ddw_A	120	GLGF-domain protein homer; pleckstrin homology dom	99.92
1evh_A	112	WH1 domain, protein (MENA EVH1 domain); molecular	99.91
2jp2_A	126	Spred-2, sprouty-related, EVH1 domain-containing p	99.91
1i2h_A	168	PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology	99.89
1qc6_A	130	EVH1 domain from ENA/VAsp-like protein; AN incompl	99.85
2ifs_A	169	N-WAsp, wiskott-aldrich syndrome protien ineractin	99.34
1mke_A	152	WIP - N-WAsp, fusion protein consisting of wiskott	99.29
3n7c_A	130	ABR034WP; nuclear pore complex, NUP2, RAN-binding	98.37
2crf_A	150	RAN binding protein 3; RAN_BP1 domain, ranbp3, str	98.32
1xke_A	130	RAN-binding protein 2; beta barrel, pleckstrin-hom	98.26
2y8g_A	138	Ranbp3-B, RAN-binding protein 3; protein transport	98.05
1rrp_B	134	Nuclear pore complex protein NUP358; complex (smal	97.86
1k5d_B	201	RAN-specific GTPase-activating protein; ranbp1, ra	96.7
4hat_B	140	RAN-specific GTPase-activating protein 1; heat rep	96.05
2ec1_A	125	Nucleoporin 50 kDa; ranbp domain, nuclear pore-ass	95.46
3m1i_B	191	RAN-specific GTPase-activating protein 1; heat rep	95.41
2qkl_A	127	DCP1 protein, SPBC3B9.21 protein; protein-protein	80.63

>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}

Probab=99.97  E-value=8.4e-31  Score=177.30  Aligned_cols=61  Identities=38%  Similarity=0.660  Sum_probs=56.8

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCCCccc
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWT   61 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~~~~~   61 (73)
                      |+|||+|.+||+||||||+||||||+++||||||+|++||++|+++|+.||+.|.++++-+
T Consensus        69 vvinc~I~~~l~Ynkatp~FHqWrd~~~~yGL~F~S~~dA~~F~~~~~~Al~~L~~g~~~~  129 (130)
T 3syx_A           69 VVLECMLKKDLIYNKVTPTFHHWKIDDKKFGLTFQSPADARAFDRGIRRAIEDISQGCPES  129 (130)
T ss_dssp             EEEEEECCTTCEEEEEETTEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHHGGGSCC---
T ss_pred             EEEeeeecCCceEEecccccccccccCeEeecccCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            5899999999999999999999999999999999999999999999999999999987644

>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4

Probab=99.92  E-value=1.1e-25  Score=147.75  Aligned_cols=56  Identities=61%  Similarity=0.977  Sum_probs=54.1

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |+|||.|.+||+||+++|+||||||++++|||||+|++||++|.++|.+||+.|++
T Consensus        60 vv~~~~l~~~l~y~~~~p~FH~w~~~~~~~GLnF~se~eA~~F~~~v~~al~~l~~  115 (115)
T 1egx_A           60 VVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALEALEG  115 (115)
T ss_dssp             EEEEEEECSSCCCCCSSTTEEEEESSSCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeeEEcCCceEEecCccceEEecCCEEEEEecCCHHHHHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999999999999999999999999864

>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A

Probab=99.92  E-value=3.1e-25  Score=146.34  Aligned_cols=57  Identities=42%  Similarity=0.744  Sum_probs=55.1

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK   57 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~   57 (73)
                      |+|||.|.+||+|||++|+||||||++++|||||+|++||.+|.++|..||+.|.++
T Consensus        62 vv~~~~l~~~~~y~~~~p~Fh~w~~~~~~~GL~F~se~eA~~F~~~v~~al~~l~~g  118 (118)
T 1xod_A           62 VVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIEDLSQG  118 (118)
T ss_dssp             EEEEEECCTTCEEEEEETTEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEEEEeCCcEEEecCCcceEEEeCCEEEEEecCCHHHHHHHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999999999999999999999999999864

>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*

Probab=99.92  E-value=2.9e-25  Score=147.16  Aligned_cols=59  Identities=29%  Similarity=0.534  Sum_probs=53.9

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCC--eEEeeecCCHHHHHHHHHHHHHHhHhcCCCCc
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFARAMLYAVECNSPKLK   59 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~--~vyGL~F~s~~da~~F~~~~~~Ale~L~~~~~   59 (73)
                      |||||.|.+||+||+++|+||||||.+  ++|||||+|++||+.|..+|.+|++.|.....
T Consensus        55 vv~n~~i~~~l~y~~a~p~FhqW~d~~~~~~~GLnF~s~~eA~~F~~~~~~~~~~l~~~~~  115 (120)
T 1ddw_A           55 AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKE  115 (120)
T ss_dssp             EEEEEECCTTCCCEECSSSEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHC----
T ss_pred             EEEeCEecCCcEEeeCCccccEEEcCCCcEEEEeccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999  99999999999999999999999999985443

>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A

Probab=99.91  E-value=3e-25  Score=144.95  Aligned_cols=55  Identities=71%  Similarity=1.075  Sum_probs=53.3

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNS   55 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~   55 (73)
                      |+|||.|.+||+||+++|+||||||++++|||||+|++||++|.++|..||+.|.
T Consensus        58 vv~~~~l~~~~~y~~~~p~Fh~w~~~~~~~GLnF~se~eA~~F~~~v~~al~~l~  112 (112)
T 1evh_A           58 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLN  112 (112)
T ss_dssp             EEEEEEECTTCCCBCCSSSEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeeEecCCceEEecCccceeEecCCEEEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999999999999999999999999874

>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}

Probab=99.91  E-value=5.5e-25  Score=146.94  Aligned_cols=55  Identities=38%  Similarity=0.713  Sum_probs=53.5

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNS   55 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~   55 (73)
                      |+|||.|.+||+|||++|+||||||++++|||||+|++||.+|.++|..||+.|.
T Consensus        71 vv~~~~l~~~l~Y~~~~p~FH~w~~~~~~~GLnF~se~eA~~F~~~v~~al~~l~  125 (126)
T 2jp2_A           71 VVLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLI  125 (126)
T ss_dssp             EEEEEEESSCCCEEEEETTEEEEECSSSEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEeCCceEEecCCcceEEEcCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence            5899999999999999999999999999999999999999999999999999985

>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4

Probab=99.89  E-value=1.4e-23  Score=146.61  Aligned_cols=56  Identities=30%  Similarity=0.570  Sum_probs=53.6

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCC--eEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~--~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |||||.|.+||+||+++|+||||||.+  +||||||+|++||++|.++|.+|++.|..
T Consensus        60 vvinc~I~~~l~Y~kasp~FHqW~d~~~~~v~GLnF~Se~eA~~F~~~~~~ale~l~~  117 (168)
T 1i2h_A           60 AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARL  117 (168)
T ss_dssp             EEEEEECCTTCCEEEEETTEEEEEETTTTEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecEecCCcEEeeCCcccceeecCCCcEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999  99999999999999999999999988763

>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4

Probab=99.85  E-value=7.2e-22  Score=131.01  Aligned_cols=63  Identities=57%  Similarity=0.878  Sum_probs=54.0

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCCCccchh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPKLKWTRH   63 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~~~~~~~   63 (73)
                      |++||.|.++|+||+++|.||||+|.+.+|||||+|++||..|..+|..||+.+.++.+.|.-
T Consensus        59 vi~n~~i~~~~~y~~~~~~Fh~w~~~~~~~GL~F~se~eA~~F~~~~~~al~~~~~~~~~~~~  121 (130)
T 1qc6_A           59 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGGPST  121 (130)
T ss_dssp             EEEEEECCTTCEEEEEETTEEEEECSSCEEEEEESCHHHHHHHHHHHHHHHHHTC--------
T ss_pred             EEEeeEEeCCcEEeccCCeeEEEEcCCEEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            589999999999999999999999999999999999999999999999999999887755543

>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}

Probab=99.34  E-value=2.3e-12  Score=89.69  Aligned_cols=57  Identities=21%  Similarity=0.377  Sum_probs=54.2

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK   57 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~   57 (73)
                      |++|+-|..|++|++.+|.||+|+..+.++||||.+++||..|...|..+|+.....
T Consensus       107 vvweqELY~~f~Y~~~r~~FHtFe~d~c~~GLnFade~EA~~F~~~V~~~l~~~~~~  163 (169)
T 2ifs_A          107 LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGRRQRK  163 (169)
T ss_dssp             CCEEEECCSSCCCBCCCSSEEEEECSSSEEEEECSCHHHHHHHHHHHHHHHHHCSCC
T ss_pred             EEEEeecccceeeccCCCeEEEeecCCcEEEEeeCCHHHHHHHHHHHHHHHHHHHhh
Confidence            689999999999999999999999999999999999999999999999999988654

>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4

Probab=99.29  E-value=4.4e-12  Score=87.11  Aligned_cols=57  Identities=21%  Similarity=0.377  Sum_probs=52.7

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK   57 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~   57 (73)
                      |+.|+-|..|+.|++.+|.||+|+..+.++||||.+++||..|...|..+++.....
T Consensus        90 viweqELY~~f~Y~~~r~~FHtFe~d~c~~GLnFade~EA~~F~~~V~~~l~~~~~~  146 (152)
T 1mke_A           90 LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGRRQRK  146 (152)
T ss_dssp             EEEEEECCSSCCCBCSSSSEEEEECSSSEEEEEESSHHHHHHHHHHHHHHHHHCC--
T ss_pred             EEEEeecccceeeccCCCeEEEEecCCcEEEEeeCCHHHHHHHHHHHHHHHHHHHhh
Confidence            578999999999999999999999999999999999999999999999999887654

>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A

Probab=98.37  E-value=7e-07  Score=59.14  Aligned_cols=56  Identities=21%  Similarity=0.378  Sum_probs=48.3

Q ss_pred             CeEeeeeecCceeeecc---Ccceeeee---CC-eEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQAT---STFHQWRD---NK-QVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkat---p~FHqWrd---~~-~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |++|+.|.++|+|.+..   ..|..|.+   +. ..|.|.|.|+++|..|..+|..+...+.+
T Consensus        62 v~lN~~i~~~m~~~~~~~~~~~~v~~~~~~dgk~~~~~lrfks~e~A~~f~~~iee~~~~~~~  124 (130)
T 3n7c_A           62 VLLNTSVVKSFKYQPIDADNENLIKWPIITDGKLETFIIKVKQKADGRRLVGAVADAQQAMEG  124 (130)
T ss_dssp             EEEEEECCTTBCCEESCTTCTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHC--
T ss_pred             EEeeccccCCcEEeEcCCCCccEEEEEecCCCceEEEEEEECCHHHHHHHHHHHHHHHhhhcc
Confidence            57999999999999986   69999984   22 67999999999999999999999988765

>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3

Probab=98.32  E-value=1e-06  Score=59.49  Aligned_cols=53  Identities=15%  Similarity=0.251  Sum_probs=44.8

Q ss_pred             CeEeeeeecCceeeeccCcceeee--e----CCeEEeeecCCHHHHHHHHHHHHHHhHhc
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWR--D----NKQVYGLNFSSKEDADSFARAMLYAVECN   54 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWr--d----~~~vyGL~F~s~~da~~F~~~~~~Ale~L   54 (73)
                      |++|+.|.++|+|+++++++.+|.  |    ..+.|.|.|.++++|..|.. +...+..|
T Consensus        81 v~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~~~~~~lirfk~~e~a~lf~~-~~e~i~~l  139 (150)
T 2crf_A           81 LILNTKLWAQMQIDKASEKSIHITAMDTEDQGVKVFLISASSKDTGQLYAA-LHHRILAL  139 (150)
T ss_dssp             EEEEEECCTTCCEECCSSSEEEEEEEBSSSCCEEEEEEECCHHHHHHHHHH-HHHHHHHH
T ss_pred             EEeeeeccCCceeecCCCCEEEEEeecCCCCceEEEEEEECCHHHHHHHHH-HHHHHHHH
Confidence            589999999999999999999999  3    23789999999999999975 45555444

>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3

Probab=98.26  E-value=3.2e-06  Score=55.50  Aligned_cols=58  Identities=16%  Similarity=0.182  Sum_probs=47.7

Q ss_pred             CeEeeeeecCceeeeccCccee--ee-----eCC---eEEeeecCCHHHHHHHHHHHHHHhHhcCCCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQ--WR-----DNK---QVYGLNFSSKEDADSFARAMLYAVECNSPKL   58 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHq--Wr-----d~~---~vyGL~F~s~~da~~F~~~~~~Ale~L~~~~   58 (73)
                      |++|+.|.++|+|++.......  |.     |.+   ..|.|.|.++++|..|..+|..|.+.+..-.
T Consensus        58 v~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~~~~~~~irfks~e~a~~f~~~~ee~k~~~~~~~  125 (130)
T 1xke_A           58 VCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIP  125 (130)
T ss_dssp             EEEEEECCTTSCEEECTTCSSCEEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             EEEecEeCCCcEEeecCCCCeEEEEEecccCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHhhccC
Confidence            5899999999999887655554  44     322   6799999999999999999999999887643

>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A

Probab=98.05  E-value=7.7e-06  Score=54.39  Aligned_cols=51  Identities=14%  Similarity=0.223  Sum_probs=43.5

Q ss_pred             CeEeeeeecCceeeeccCcceeeee------CCeEEeeecCCHHHHHHHHHHHHHHh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRD------NKQVYGLNFSSKEDADSFARAMLYAV   51 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd------~~~vyGL~F~s~~da~~F~~~~~~Al   51 (73)
                      |++|+.|.++|+|+++++++..|.-      .-+.|.|.|.++++|..|...+.++.
T Consensus        69 v~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~~~~~~lirfk~~e~a~lf~~~~~~i~  125 (138)
T 2y8g_A           69 LILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRIL  125 (138)
T ss_dssp             EEEEEECCTTCCEEEEETTEEEEECCC--CCCCCEEEEECCHHHHHHHHHHHHHHHH
T ss_pred             EEEeeEecCCceeecCCCCEEEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHH
Confidence            5799999999999999999999983      23789999999999999986554443

>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3

Probab=97.86  E-value=1.5e-05  Score=52.50  Aligned_cols=51  Identities=18%  Similarity=0.237  Sum_probs=42.3

Q ss_pred             CeEeeeeecCceeeeccCcceeee-------eC---CeEEeeecCCHHHHHHHHHHHHHHh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWR-------DN---KQVYGLNFSSKEDADSFARAMLYAV   51 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWr-------d~---~~vyGL~F~s~~da~~F~~~~~~Al   51 (73)
                      |++|+.|.++|+|++....-..|+       |.   ...|.|.|.++++|..|..+|.+|.
T Consensus        72 v~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~k~~~~~irfk~~e~A~~f~~~~~e~~  132 (134)
T 1rrp_B           72 ICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQ  132 (134)
T ss_dssp             EEECCBCCSSCCCBCSTTCTTEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred             EEEEeEecCCceEeecCCCCeEEEEEcccccCCCCceEEEEEEECCHHHHHHHHHHHHHHh
Confidence            579999999999988765555665       22   2679999999999999999998875

>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*

Probab=96.70  E-value=0.0029  Score=44.59  Aligned_cols=56  Identities=14%  Similarity=0.238  Sum_probs=46.5

Q ss_pred             CeEeeeeecCceeeec--cCcceee---ee---CC---eEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQA--TSTFHQW---RD---NK---QVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynka--tp~FHqW---rd---~~---~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |++|+.|.++|+|...  +...-.|   .|   ..   ..|-+.|.++++|..|...|..|.+.+..
T Consensus        98 V~LN~~I~~~m~~~~~~~s~ks~v~~~~~d~ad~~~k~e~~~iRfks~e~A~~f~~~~ee~k~~~~~  164 (201)
T 1k5d_B           98 ICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEE  164 (201)
T ss_dssp             EEEEEECCSSCCCCBCSSCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeEecCCceeeecCCCCceEEEEeccccCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHHh
Confidence            5799999999999865  5677788   33   12   45999999999999999999999987654

>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*

Probab=96.05  E-value=0.015  Score=38.70  Aligned_cols=54  Identities=24%  Similarity=0.372  Sum_probs=43.0

Q ss_pred             CeEeeeeecCceeeec--cCcceeee---e---CC---eEEeeecCCHHHHHHHHHHHHHHhHhc
Q psy9215           1 VVINCVILKSLKYNQA--TSTFHQWR---D---NK---QVYGLNFSSKEDADSFARAMLYAVECN   54 (73)
Q Consensus         1 VviNc~I~~gl~Ynka--tp~FHqWr---d---~~---~vyGL~F~s~~da~~F~~~~~~Ale~L   54 (73)
                      |++|..|.++|+|...  ++.---|-   |   ..   ..|-+.|.++++|..|...|..|.+.+
T Consensus        73 v~lN~~i~~~m~~~~~~~s~k~~v~~~~~D~sdg~~~~~~~~iRfk~~e~A~~f~~~~ee~~~~n  137 (140)
T 4hat_B           73 ICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEIN  137 (140)
T ss_dssp             EEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSCEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeEecCCeEEeEcCCCCceEEEEccccCCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHh
Confidence            5799999999999875  33444563   3   22   469999999999999999999998764

>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.46  E-value=0.032  Score=36.21  Aligned_cols=52  Identities=13%  Similarity=0.208  Sum_probs=41.2

Q ss_pred             CeEeeeeecCceeeec-cCcceeeee------C-----CeEEeeecCCHHHHHHHHHHHHHHhH
Q psy9215           1 VVINCVILKSLKYNQA-TSTFHQWRD------N-----KQVYGLNFSSKEDADSFARAMLYAVE   52 (73)
Q Consensus         1 VviNc~I~~gl~Ynka-tp~FHqWrd------~-----~~vyGL~F~s~~da~~F~~~~~~Ale   52 (73)
                      |++|..|.++|+|... ....--|..      .     -..|=|.|.++++|..|...|..+.+
T Consensus        61 v~lN~~i~~~m~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~lrfk~~e~a~~f~~~~~e~k~  124 (125)
T 2ec1_A           61 ILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKKD  124 (125)
T ss_dssp             BSCCEECCSSCCEECCTTTEEEEEECCSSCSCSSSSSSCEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEeeEEcCCCeEEecCCCcEEEEEccCCcccCCCCCceEEEEEEECCHHHHHHHHHHHHHhhc
Confidence            5799999999999886 344555653      1     24699999999999999999988754

>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}

Probab=95.41  E-value=0.036  Score=38.91  Aligned_cols=54  Identities=24%  Similarity=0.372  Sum_probs=43.3

Q ss_pred             CeEeeeeecCceeeec--cCcceeee---e---CC---eEEeeecCCHHHHHHHHHHHHHHhHhc
Q psy9215           1 VVINCVILKSLKYNQA--TSTFHQWR---D---NK---QVYGLNFSSKEDADSFARAMLYAVECN   54 (73)
Q Consensus         1 VviNc~I~~gl~Ynka--tp~FHqWr---d---~~---~vyGL~F~s~~da~~F~~~~~~Ale~L   54 (73)
                      |++|+.|.++|+|...  +..---|.   |   ..   ..|-|.|.++++|..|...|..|.+.+
T Consensus       124 V~LN~~I~~~m~~~~~~~sdks~v~~~~~D~sdge~k~e~~aIRFk~~E~A~eF~~~~eeaq~~n  188 (191)
T 3m1i_B          124 ICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEIN  188 (191)
T ss_dssp             EEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeecCCCcEEeECCCCCceEEEEecCcCCCCCcceEEEEEEECCHHHHHHHHHHHHHHHHHh
Confidence            5799999999999876  33444554   2   22   469999999999999999999998764

>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*

Probab=80.63  E-value=2.7  Score=27.33  Aligned_cols=46  Identities=13%  Similarity=0.126  Sum_probs=37.7

Q ss_pred             eeecCceeeeccCcceeeeeC-CeEEeeecCCHHHHHHHHHHHHHHhH
Q psy9215           6 VILKSLKYNQATSTFHQWRDN-KQVYGLNFSSKEDADSFARAMLYAVE   52 (73)
Q Consensus         6 ~I~~gl~Ynkatp~FHqWrd~-~~vyGL~F~s~~da~~F~~~~~~Ale   52 (73)
                      .|.+++.+ ...+.|--+|.. ..+||+=|-+++|.......|++-++
T Consensus        80 ~i~~~~~~-e~~~~~l~~r~~~~~i~GiWf~~~~d~~~i~~~l~~ll~  126 (127)
T 2qkl_A           80 FINHPSNV-HLVDRYLIHRTENQHVVGLWMFDPNDMSRIFNIVKESLL  126 (127)
T ss_dssp             EECSGGGE-EEETTEEEEEETTTEEEEEEESSTHHHHHHHHHHHHHTC
T ss_pred             ecCCCceE-EEeCCEEEEEcCCCcEEEEEEEchHHHHHHHHHHHHHHh
Confidence            47788888 577778899984 58999999999999988887776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	73
d1i2ha_	145	b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxI	5e-21
d1xoda1	114	b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-c	5e-20
d1egxa_	115	b.55.1.4 (A:) Vasodilator-stimulated phosphoprotei	4e-14
d1evha_	111	b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId	1e-13
d1mkea1	114	b.55.1.4 (A:31-144) Actin regulatory protein WASP	2e-12
d1k5db_	146	b.55.1.3 (B:) Ran-binding protein 1, Ranbp1 {Human	6e-04
d1xkea1	118	b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (H	0.004

>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Homer
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.0 bits (192), Expect = 5e-21
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDN--KQVYGLNFSSKEDADSFARAMLYAVEC 53
            +IN  I  ++ + + +  F QW D+    VYGL FSS+     FA       E 
Sbjct: 57  AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEA 111

>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]} Length = 114

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Sprouty-related, EVH1 domain-containing protein 1, Spred-1
species: Western clawed frog (Xenopus tropicalis) [TaxId: 8364]

 Score = 74.5 bits (183), Expect = 5e-20
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VV+ CV+ + L YN+ T TFH WR   + +GL F S  DA +F R +  A+E
Sbjct: 58  VVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIE 109

>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP) {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Vasodilator-stimulated phosphoprotein (VASP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 4e-14
 Identities = 34/52 (65%), Positives = 40/52 (76%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I++ +KYNQAT  FHQWRD +QV+GLNF SKEDA  FA  M  A+E
Sbjct: 60  VVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALE 111

>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Enabled
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.4 bits (141), Expect = 1e-13
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVE 52
           VVINC I K LKYNQAT TFHQWRD +QVYGLNF SKEDA+ FA AM++A+E
Sbjct: 57  VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALE 108

>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Actin regulatory protein WASP
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.6 bits (134), Expect = 2e-12
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 1   VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAM 47
           ++    +  +  YN     FH +  +     LNF+++E+A  F +A+
Sbjct: 60  LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAV 106

>d1k5db_ b.55.1.3 (B:) Ran-binding protein 1, Ranbp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 146

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Ran-binding protein 1, Ranbp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (77), Expect = 6e-04
 Identities = 8/70 (11%), Positives = 19/70 (27%), Gaps = 11/70 (15%)

Query: 1   VVINCVILKSLKYNQATSTFHQWR-----------DNKQVYGLNFSSKEDADSFARAMLY 49
           +  N  I   ++      +   W               ++  + F + E+A  F      
Sbjct: 77  ICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEE 136

Query: 50  AVECNSPKLK 59
             +    + K
Sbjct: 137 CRKEIEEREK 146

>d1xkea1 b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Ran-binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.1 bits (70), Expect = 0.004
 Identities = 8/57 (14%), Positives = 16/57 (28%), Gaps = 10/57 (17%)

Query: 1   VVINCVILKSLKYNQATSTFHQWR----------DNKQVYGLNFSSKEDADSFARAM 47
           V  N  I  ++     + +   W              +     F + E A+ F +  
Sbjct: 52  VCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKF 108

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	73
d1i2ha_	145	Homer {Rat (Rattus norvegicus) [TaxId: 10116]}	99.94
d1xoda1	114	Sprouty-related, EVH1 domain-containing protein 1,	99.91
d1egxa_	115	Vasodilator-stimulated phosphoprotein (VASP) {Huma	99.73
d1evha_	111	Enabled {Mouse (Mus musculus) [TaxId: 10090]}	99.71
d1mkea1	114	Actin regulatory protein WASP {Rat (Rattus norvegi	99.64
d1xkea1	118	Ran-binding protein 2 {Human (Homo sapiens) [TaxId	98.26
d1rrpb_	134	Nuclear pore complex protein Nup358 {Human (Homo s	97.75
d1k5db_	146	Ran-binding protein 1, Ranbp1 {Human (Homo sapiens	97.52
d2crfa1	137	Ran binding protein 3 {Human (Homo sapiens) [TaxId	97.15

>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Homer
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.9e-28  Score=166.81  Aligned_cols=56  Identities=30%  Similarity=0.570  Sum_probs=53.6

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCC--eEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNK--QVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~--~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |+|||+|.+||+||||||+||||||+|  +||||||+|++||++|+++|+.|+|.|..
T Consensus        57 vvin~~i~~~l~y~kas~~FhqWrd~r~~~V~GL~F~s~~da~~F~~~~~~ale~~~~  114 (145)
T d1i2ha_          57 AIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARL  114 (145)
T ss_dssp             EEEEEECCTTCCEEEEETTEEEEEETTTTEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeccCCceeeecccceeEeeeccccceeecccCCHHHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999999998  89999999999999999999999998853

>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Sprouty-related, EVH1 domain-containing protein 1, Spred-1
species: Western clawed frog (Xenopus tropicalis) [TaxId: 8364]

Probab=99.91  E-value=2.3e-25  Score=146.30  Aligned_cols=57  Identities=42%  Similarity=0.744  Sum_probs=55.3

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSPK   57 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~~   57 (73)
                      |+|||.|.+||+||+++|+||||++++++|||||+|++||++|.++|+.|||.|.++
T Consensus        58 vvi~~~l~~~~~Y~~~~~~FH~w~~~~~~~GL~F~se~eA~~F~~~v~~ale~l~~g  114 (114)
T d1xoda1          58 VVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIEDLSQG  114 (114)
T ss_dssp             EEEEEECCTTCEEEEEETTEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEEEecCCCEEecCCCceEEEEeCCEEEEEecCCHHHHHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999999999999999999999864

>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Vasodilator-stimulated phosphoprotein (VASP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.7e-18  Score=110.70  Aligned_cols=56  Identities=61%  Similarity=0.977  Sum_probs=54.0

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |++||.|.++|+|++.+|.||+|++.+.+|||+|.++++|..|..+|..|++.|++
T Consensus        60 v~lN~~I~~~~~~~~~~~~f~~w~~~~~~f~lrF~~~e~A~~F~~~~~~a~~~l~~  115 (115)
T d1egxa_          60 VVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALEALEG  115 (115)
T ss_dssp             EEEEEEECSSCCCCCSSTTEEEEESSSCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEeEECCCcceEEcCCcceeecccceEEEEEeCCHHHHHHHHHHHHHHHHhhcC
Confidence            57999999999999999999999999999999999999999999999999999864

>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Enabled
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=4.7e-18  Score=108.04  Aligned_cols=55  Identities=71%  Similarity=1.075  Sum_probs=53.1

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHhcC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVECNS   55 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~L~   55 (73)
                      |++||.|.++|+|++.+|+||+|++.+.+|||+|.++++|..|..+|..|++.|.
T Consensus        57 v~~N~~i~~~~~y~~~~~~~~~w~~~~~~fglrF~~~e~A~~F~~~v~~a~e~l~  111 (111)
T d1evha_          57 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLN  111 (111)
T ss_dssp             EEEEEEECTTCCCBCCSSSEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEeccCccceecCCCceEEEecCceEEEEEcCCHHHHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999999999999999999999999999999874

>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Actin regulatory protein WASP
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=1e-16  Score=102.90  Aligned_cols=53  Identities=21%  Similarity=0.387  Sum_probs=50.8

Q ss_pred             CeEeeeeecCceeeeccCcceeeeeCCeEEeeecCCHHHHHHHHHHHHHHhHh
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRDNKQVYGLNFSSKEDADSFARAMLYAVEC   53 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd~~~vyGL~F~s~~da~~F~~~~~~Ale~   53 (73)
                      |++||.|.++|.|++.+|+||+|++.+.++||+|++++||..|.+.|.+++..
T Consensus        60 vi~e~eI~~~~~Y~k~~~~Fh~~~~~~~~~GL~F~~~~eA~~f~~~i~~~~~~  112 (114)
T d1mkea1          60 LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGR  112 (114)
T ss_dssp             EEEEEECCSSCCCBCSSSSEEEEECSSSEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEccCCcEEeccCCeEEEEEcCCceEEEeeCCHHHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999999875

>d1xkea1 b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Ran-binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.1e-06  Score=54.84  Aligned_cols=56  Identities=16%  Similarity=0.198  Sum_probs=46.9

Q ss_pred             CeEeeeeecCceeeeccCcceeee---------eC-CeEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWR---------DN-KQVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWr---------d~-~~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |++|+.|.++|+|+........|.         +. ...|.|.|.++++|..|..+|..|.+.|.+
T Consensus        52 v~lN~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~lrfk~~e~a~~f~~~~~eak~~l~~  117 (118)
T d1xkea1          52 VCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLD  117 (118)
T ss_dssp             EEEEEECCTTSCEEECTTCSSCEEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEeEEcCCCccccccCCceEEEEeccccCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHhc
Confidence            579999999999987776655554         11 267999999999999999999999998864

>d1rrpb_ b.55.1.3 (B:) Nuclear pore complex protein Nup358 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Nuclear pore complex protein Nup358
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.2e-05  Score=50.94  Aligned_cols=52  Identities=15%  Similarity=0.146  Sum_probs=43.8

Q ss_pred             CeEeeeeecCceeeeccCcceeeee--------C--CeEEeeecCCHHHHHHHHHHHHHHhH
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRD--------N--KQVYGLNFSSKEDADSFARAMLYAVE   52 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd--------~--~~vyGL~F~s~~da~~F~~~~~~Ale   52 (73)
                      |++|+.|.++|+|....+....|.-        .  ...|.|.|.++++|..|...|..|.+
T Consensus        72 v~lN~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~k~~~~~lrfk~~e~a~~f~~~~~eak~  133 (134)
T d1rrpb_          72 ICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQS  133 (134)
T ss_dssp             EEECCBCCSSCCCBCSTTCTTEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEECCCcEEeecCCCceEEEEEeeccCCCCCcEEEEEEEECCHHHHHHHHHHHHHhhc
Confidence            5799999999999988777777762        1  24699999999999999999988754

>d1k5db_ b.55.1.3 (B:) Ran-binding protein 1, Ranbp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Ran-binding protein 1, Ranbp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=3.4e-05  Score=49.57  Aligned_cols=56  Identities=14%  Similarity=0.250  Sum_probs=47.0

Q ss_pred             CeEeeeeecCceeeeccCcceeee-----e---C---CeEEeeecCCHHHHHHHHHHHHHHhHhcCC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWR-----D---N---KQVYGLNFSSKEDADSFARAMLYAVECNSP   56 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWr-----d---~---~~vyGL~F~s~~da~~F~~~~~~Ale~L~~   56 (73)
                      |++|+.|.++|++......-..|.     |   .   ...|.+.|.++++|..|...|..|.+.+++
T Consensus        77 v~lN~~i~~~m~~~~~~~~~~~~~~~~~~d~~~~~~k~~~~~irfk~~e~a~~f~~~~~e~k~~~~~  143 (146)
T d1k5db_          77 ICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEE  143 (146)
T ss_dssp             EEEEEECCSSCCCCBCSSCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeEecCCceecccCCCceeEEEEecCCCccCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHHh
Confidence            579999999999998877766665     2   1   257999999999999999999999887754

>d2crfa1 b.55.1.3 (A:8-144) Ran binding protein 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Ran binding protein 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00046  Score=43.62  Aligned_cols=54  Identities=15%  Similarity=0.244  Sum_probs=42.5

Q ss_pred             CeEeeeeecCceeeeccCcceeeee----C--CeEEeeecCCHHHHHHHHHHHHHHhHhcC
Q psy9215           1 VVINCVILKSLKYNQATSTFHQWRD----N--KQVYGLNFSSKEDADSFARAMLYAVECNS   55 (73)
Q Consensus         1 VviNc~I~~gl~Ynkatp~FHqWrd----~--~~vyGL~F~s~~da~~F~~~~~~Ale~L~   55 (73)
                      |+||+.|.++|.|.++++++..|.-    +  -+.|-+.|.+++.+..|. .+.+.+..|.
T Consensus        74 v~lN~~i~~~m~~~~~~~k~v~~~~~d~~~~~~~~~li~~~~~~~~~l~~-~i~e~i~~l~  133 (137)
T d2crfa1          74 LILNTKLWAQMQIDKASEKSIHITAMDTEDQGVKVFLISASSKDTGQLYA-ALHHRILALR  133 (137)
T ss_dssp             EEEEEECCTTCCEECCSSSEEEEEEEBSSSCCEEEEEEECCHHHHHHHHH-HHHHHHHHHH
T ss_pred             EEEeCEECCCCccccCCCCEEEEEeecCCCCceEEEEEEECCHHHHHHHH-HHHHHHHHHH
Confidence            5799999999999999999999973    1  167999999877666665 4666665553