Psyllid ID: psy9353
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | 2.2.26 [Sep-21-2011] | |||||||
| O55236 | 597 | mRNA-capping enzyme OS=Mu | yes | N/A | 0.887 | 0.807 | 0.488 | 1e-136 | |
| O60942 | 597 | mRNA-capping enzyme OS=Ho | yes | N/A | 0.889 | 0.809 | 0.492 | 1e-134 | |
| Q6NY98 | 598 | mRNA-capping enzyme OS=Da | yes | N/A | 0.893 | 0.811 | 0.491 | 1e-128 | |
| Q17607 | 623 | mRNA-capping enzyme OS=Ca | yes | N/A | 0.869 | 0.757 | 0.409 | 4e-95 | |
| P40997 | 402 | mRNA-capping enzyme subun | yes | N/A | 0.550 | 0.743 | 0.304 | 2e-26 | |
| Q6BT58 | 458 | mRNA-capping enzyme subun | yes | N/A | 0.554 | 0.657 | 0.270 | 8e-25 | |
| Q6C783 | 391 | mRNA-capping enzyme subun | yes | N/A | 0.559 | 0.777 | 0.278 | 5e-23 | |
| P78587 | 449 | mRNA-capping enzyme subun | N/A | N/A | 0.556 | 0.672 | 0.265 | 2e-22 | |
| Q7SB53 | 402 | mRNA-capping enzyme subun | N/A | N/A | 0.418 | 0.564 | 0.298 | 3e-21 | |
| Q755D0 | 463 | mRNA-capping enzyme subun | yes | N/A | 0.495 | 0.580 | 0.289 | 1e-18 |
| >sp|O55236|MCE1_MOUSE mRNA-capping enzyme OS=Mus musculus GN=Rngtt PE=1 SV=1 | Back alignment and function desciption |
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Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/500 (48%), Positives = 323/500 (64%), Gaps = 18/500 (3%)
Query: 56 KQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFI 115
K ++K+ L +DLT TSRFYD++++E+ I YIK+QC+GH E P + T FI LC +F
Sbjct: 55 KSLKVKMSLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFN 114
Query: 116 SKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELF 175
+SP E IGVHCTHGFNRTGFL+ ++LVE+M++ + AA+ F+ ARPPGIYK DYL ELF
Sbjct: 115 ERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELF 174
Query: 176 RRYDDVPCNLPAPPSYDD--------SEASSSSKSHHSNNSSHSNSRNRNNKSRIAKNPT 227
RRY D+ P PP D + K SS S S+ R K R+
Sbjct: 175 RRYGDIE-EAPPPPVLPDWCFEDEDEEDEDEDGKKDSEPGSSASFSKRR--KERLKLGAI 231
Query: 228 FMPGVS--GVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIGYLAEKKYMV 285
F+ G++ GV + + K+ ++Q + C +E GFPG+QPVSMD+ NI L +K Y V
Sbjct: 232 FLEGITVKGVTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKV 291
Query: 286 SWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDRV 345
SWKADGTRYMM I +E++ DRD S++ +S L FP RKD L+NTLLDGEM+ID+V
Sbjct: 292 SWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLRMHLSNTLLDGEMIIDKV 351
Query: 346 QGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVR 405
GQ +PRYL+YDII+F+ V F R+Q I+ EII PRH M+ I+K EPFSVR
Sbjct: 352 NGQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMKTGLIDKTQEPFSVR 411
Query: 406 VKDFWSVDKAGYLLSDKFT--LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMNSIDFL 463
K F+ ++ + LL F + HE DGLIFQP+ + Y G+ D LKWKP ++NS+DF
Sbjct: 412 PKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIGK-YKPGRCDDILKWKPPSLNSVDFR 470
Query: 464 MKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENNQWVFMR 523
+KI G G+LP VG LY G ++ FA++K+TK K D KI+ECK+ENN WVFMR
Sbjct: 471 LKITRMGGEGLLPQNVGLLYVGG--YERPFAQIKVTKELKQYDNKIIECKFENNSWVFMR 528
Query: 524 ERTDKSFPNAVETAMGEWNN 543
+R DKSFPNA TAM N+
Sbjct: 529 QRIDKSFPNAYNTAMAVCNS 548
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Bifunctional mRNA-capping enzyme exhibiting RNA 5'-triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. Mus musculus (taxid: 10090) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 5EC: 0 |
| >sp|O60942|MCE1_HUMAN mRNA-capping enzyme OS=Homo sapiens GN=RNGTT PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6NY98|MCE1_DANRE mRNA-capping enzyme OS=Danio rerio GN=rngtt PE=2 SV=1 | Back alignment and function description |
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| >sp|Q17607|MCE1_CAEEL mRNA-capping enzyme OS=Caenorhabditis elegans GN=cel-1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P40997|MCE1_SCHPO mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ceg1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6BT58|MCE1_DEBHA mRNA-capping enzyme subunit alpha OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CEG1 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q6C783|MCE1_YARLI mRNA-capping enzyme subunit alpha OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CEG1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P78587|MCE1_CANAX mRNA-capping enzyme subunit alpha OS=Candida albicans GN=CGT1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q7SB53|MCE1_NEUCR mRNA-capping enzyme subunit alpha OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06260 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q755D0|MCE1_ASHGO mRNA-capping enzyme subunit alpha OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CEG1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | ||||||
| 350407940 | 924 | PREDICTED: mRNA-capping enzyme-like [Bom | 0.882 | 0.518 | 0.542 | 1e-151 | |
| 110767814 | 924 | PREDICTED: mRNA-capping enzyme [Apis mel | 0.880 | 0.517 | 0.537 | 1e-150 | |
| 340721848 | 924 | PREDICTED: mRNA-capping enzyme-like [Bom | 0.883 | 0.519 | 0.535 | 1e-150 | |
| 380016125 | 923 | PREDICTED: mRNA-capping enzyme-like [Api | 0.883 | 0.520 | 0.532 | 1e-149 | |
| 383864425 | 916 | PREDICTED: LOW QUALITY PROTEIN: mRNA-cap | 0.869 | 0.515 | 0.536 | 1e-148 | |
| 193613216 | 595 | PREDICTED: mRNA-capping enzyme-like [Acy | 0.882 | 0.805 | 0.510 | 1e-146 | |
| 91083171 | 583 | PREDICTED: similar to mRNA capping enzym | 0.887 | 0.826 | 0.549 | 1e-146 | |
| 332024766 | 926 | mRNA-capping enzyme [Acromyrmex echinati | 0.885 | 0.519 | 0.522 | 1e-144 | |
| 156542955 | 588 | PREDICTED: mRNA-capping enzyme-like [Nas | 0.887 | 0.819 | 0.519 | 1e-143 | |
| 322790485 | 891 | hypothetical protein SINV_09767 [Solenop | 0.882 | 0.537 | 0.506 | 1e-142 |
| >gi|350407940|ref|XP_003488251.1| PREDICTED: mRNA-capping enzyme-like [Bombus impatiens] | Back alignment and taxonomy information |
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Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/494 (54%), Positives = 341/494 (69%), Gaps = 15/494 (3%)
Query: 56 KQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFI 115
K ++K+GLWIDLT T+RFYDK +E Y+K+QC GH E P+E+QTR+F+ +C FI
Sbjct: 61 KSQKIKLGLWIDLTNTTRFYDKESLEAYGCKYLKLQCRGHGETPSEEQTRIFVQICRNFI 120
Query: 116 SKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELF 175
S +PLE IGVHCTHGFNRTGFL+ISYLVE V A + F+ ARPPGIYK DY+ ELF
Sbjct: 121 SFNPLEVIGVHCTHGFNRTGFLIISYLVETDGTSVDAGLAEFATARPPGIYKADYIQELF 180
Query: 176 RRYDDV---PCNLPAPP---SYDDSEASSSSKSHHSNNSSHSNSRNRNNKSRIA---KNP 226
RRYDDV P P P YDDS + + ++N ++ N N K R KNP
Sbjct: 181 RRYDDVEDAPDPAPRPAWCLEYDDSNVEDTDEGTSADNDNY-NQDVPNKKRRREFNNKNP 239
Query: 227 TFMPGVSGVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIGYLAEKKYMVS 286
FM GV GV + ++ K+ +Q ++ +C+++ GFPGSQPVSMD +NI L EK Y VS
Sbjct: 240 IFMAGVPGVTPILEDRKLSGIQRRVQGICSWKSTGFPGSQPVSMDEDNIRLLHEKPYRVS 299
Query: 287 WKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDRVQ 346
WKADGTRYMM I+ EIYF DRD S+++++G+TFPH KD ++ L +TLLDGEMVID+
Sbjct: 300 WKADGTRYMMMIQADGEIYFVDRDNSVFQVNGMTFPHPKDISRTLKDTLLDGEMVIDKAN 359
Query: 347 GQNIPRYLVYDIIRFDNNDVTRQKF-TTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVR 405
G+ PRYLVYD++ +D D+++ F R II+ EII RHRAM+ ++ K EPFSVR
Sbjct: 360 GKEYPRYLVYDVVMYDGKDISKLPFHPERSCIIEREIIGGRHRAMKEGKLRKEMEPFSVR 419
Query: 406 VKDFWSVDKAGYLLSDKFT--LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMNSIDFL 463
+K FW V +A LLS+KF L HEPDGLIFQP EPY G + D LKWKP + NS+DF
Sbjct: 420 LKHFWDVTQAANLLSEKFAKQLGHEPDGLIFQPAKEPYCPGLSPDVLKWKPLSQNSVDFR 479
Query: 464 MKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENNQWVFMR 523
+KI T SG GILP K+G LY G + + F +MK+TK KDL+ I+ECK+EN QWVFMR
Sbjct: 480 LKIITESGEGILPKKIGYLYVGGMK--EPFDKMKVTKQIKDLNNAIIECKFENGQWVFMR 537
Query: 524 ERTDKSFPNAVETA 537
ERTDKSFPN+ TA
Sbjct: 538 ERTDKSFPNSYNTA 551
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Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|110767814|ref|XP_397436.3| PREDICTED: mRNA-capping enzyme [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|340721848|ref|XP_003399326.1| PREDICTED: mRNA-capping enzyme-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|380016125|ref|XP_003692039.1| PREDICTED: mRNA-capping enzyme-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|383864425|ref|XP_003707679.1| PREDICTED: LOW QUALITY PROTEIN: mRNA-capping enzyme-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|193613216|ref|XP_001945261.1| PREDICTED: mRNA-capping enzyme-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|91083171|ref|XP_972171.1| PREDICTED: similar to mRNA capping enzyme [Tribolium castaneum] gi|270006979|gb|EFA03427.1| hypothetical protein TcasGA2_TC013414 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|332024766|gb|EGI64955.1| mRNA-capping enzyme [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|156542955|ref|XP_001602117.1| PREDICTED: mRNA-capping enzyme-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|322790485|gb|EFZ15363.1| hypothetical protein SINV_09767 [Solenopsis invicta] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | ||||||
| UNIPROTKB|E1C254 | 600 | RNGTT "Uncharacterized protein | 0.891 | 0.806 | 0.467 | 6.2e-129 | |
| UNIPROTKB|J9NTU7 | 568 | RNGTT "Uncharacterized protein | 0.893 | 0.853 | 0.486 | 3e-124 | |
| UNIPROTKB|E2R9G2 | 597 | RNGTT "Uncharacterized protein | 0.893 | 0.812 | 0.486 | 3e-124 | |
| UNIPROTKB|Q2KHX7 | 595 | RNGTT "RNA guanylyltransferase | 0.893 | 0.815 | 0.480 | 1.3e-123 | |
| RGD|1311410 | 597 | Rngtt "RNA guanylyltransferase | 0.893 | 0.812 | 0.478 | 1.3e-123 | |
| UNIPROTKB|O60942 | 597 | RNGTT "mRNA-capping enzyme" [H | 0.893 | 0.812 | 0.482 | 1.7e-123 | |
| FB|FBgn0030556 | 649 | mRNA-cap "mRNA-capping-enzyme" | 0.576 | 0.482 | 0.490 | 1.9e-123 | |
| MGI|MGI:1329041 | 597 | Rngtt "RNA guanylyltransferase | 0.893 | 0.812 | 0.476 | 4.4e-123 | |
| ZFIN|ZDB-GENE-040426-2087 | 598 | rngtt "RNA guanylyltransferase | 0.893 | 0.811 | 0.481 | 1.7e-121 | |
| UNIPROTKB|B4DSJ8 | 514 | RNGTT "mRNA-capping enzyme" [H | 0.646 | 0.682 | 0.474 | 2.3e-116 |
| UNIPROTKB|E1C254 RNGTT "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Score = 1176 (419.0 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 234/501 (46%), Positives = 312/501 (62%)
Query: 56 KQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFI 115
K ++K+GL +DLT T+RFYD++++++ I YIK+QC+GH E P + T FI +C F
Sbjct: 55 KSLKVKMGLLVDLTNTNRFYDRNDIQKEGIKYIKLQCKGHGECPTPENTETFIRVCEHFS 114
Query: 116 SKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELF 175
K+P E IGVHCTHGFNRTGFL+ ++LVE++++ + AA+ F+ ARPPGIYK DYL ELF
Sbjct: 115 EKNPTELIGVHCTHGFNRTGFLICAFLVEKLDWSIEAAVATFAQARPPGIYKGDYLKELF 174
Query: 176 RRYDDVPCNLPAPPSY------DDSEAXXXXXXXXXXXX---XXXXXXXXXXXXXIAKNP 226
RRY D + P+PP DD E +
Sbjct: 175 RRYGDED-DAPSPPELPEWCFEDDEEEDDDNGKMGGQESEPGSSSSSFGKRRKEHLKLGA 233
Query: 227 TFMPGVSG--VKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIGYLAEKKYM 284
F+ GV+ V + + K+ +Q + + C +E GFPG+QPVSMD+ NI +L +K Y
Sbjct: 234 VFLEGVTVKYVTQVTTQPKLGGIQQKCQQFCGWEGSGFPGAQPVSMDKQNIKFLEQKPYK 293
Query: 285 VSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDR 344
VSWKADGTRYMM I +E+Y DRD S++ +S L FP RKD LTNTLLDGEM++D+
Sbjct: 294 VSWKADGTRYMMLIDGKNEVYMIDRDNSIFHVSNLEFPFRKDLRMHLTNTLLDGEMIVDK 353
Query: 345 VQGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSV 404
V GQ +PRYL+YDII+F+ V F R+ I+ EII PRH M+ I+K EPFSV
Sbjct: 354 VNGQVVPRYLIYDIIKFNGQPVGDCDFNVRLSCIEKEIIFPRHEKMKTGHIDKAQEPFSV 413
Query: 405 RVKDFWSVDKAGYLLSDKFT--LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMNSIDF 462
R K F+ + + LL F + HE DGLIFQP + Y G+ D LKWKP ++NS+DF
Sbjct: 414 RNKPFFDIYASRKLLEGSFAREVSHEVDGLIFQPTGK-YKPGRCDDILKWKPPSLNSVDF 472
Query: 463 LMKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENNQWVFM 522
+KI G G+L VG LY G+ + FA++K+TK K D KI+ECK+ENN WVFM
Sbjct: 473 RLKITRIGGEGLLTQNVGLLYVGN--FDRPFAQIKVTKELKQYDNKIIECKFENNSWVFM 530
Query: 523 RERTDKSFPNAVETAMGEWNN 543
R+R DKSFPNA TAM N+
Sbjct: 531 RQRIDKSFPNAYSTAMAVCNS 551
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| UNIPROTKB|J9NTU7 RNGTT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R9G2 RNGTT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2KHX7 RNGTT "RNA guanylyltransferase and 5'-phosphatase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|1311410 Rngtt "RNA guanylyltransferase and 5'-phosphatase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O60942 RNGTT "mRNA-capping enzyme" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| FB|FBgn0030556 mRNA-cap "mRNA-capping-enzyme" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| MGI|MGI:1329041 Rngtt "RNA guanylyltransferase and 5'-phosphatase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2087 rngtt "RNA guanylyltransferase and 5'-phosphatase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4DSJ8 RNGTT "mRNA-capping enzyme" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6NY98 | MCE1_DANRE | 2, ., 7, ., 7, ., 5, 0 | 0.4910 | 0.8931 | 0.8110 | yes | N/A |
| O55236 | MCE1_MOUSE | 2, ., 7, ., 7, ., 5, 0 | 0.488 | 0.8876 | 0.8073 | yes | N/A |
| O60942 | MCE1_HUMAN | 2, ., 7, ., 7, ., 5, 0 | 0.4929 | 0.8895 | 0.8090 | yes | N/A |
| Q17607 | MCE1_CAEEL | 2, ., 7, ., 7, ., 5, 0 | 0.4095 | 0.8692 | 0.7576 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.921 |
| 4th Layer | 2.7.7.50 | 0.914 |
| 3rd Layer | 3.1.3.33 | 0.914 |
| 3rd Layer | 2.7.7 | 0.921 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 543 | |||
| cd07895 | 215 | cd07895, Adenylation_mRNA_capping, Adenylation dom | 6e-86 | |
| pfam01331 | 193 | pfam01331, mRNA_cap_enzyme, mRNA capping enzyme, c | 1e-61 | |
| COG5226 | 404 | COG5226, CEG1, mRNA capping enzyme, guanylyltransf | 3e-36 | |
| pfam03919 | 105 | pfam03919, mRNA_cap_C, mRNA capping enzyme, C-term | 3e-21 | |
| cd06846 | 182 | cd06846, Adenylation_DNA_ligase_like, Adenylation | 2e-12 | |
| pfam00782 | 131 | pfam00782, DSPc, Dual specificity phosphatase, cat | 5e-08 | |
| smart00195 | 138 | smart00195, DSPc, Dual specificity phosphatase, ca | 3e-07 | |
| pfam01068 | 195 | pfam01068, DNA_ligase_A_M, ATP dependent DNA ligas | 1e-04 | |
| COG2453 | 180 | COG2453, CDC14, Predicted protein-tyrosine phospha | 0.003 |
| >gnl|CDD|185706 cd07895, Adenylation_mRNA_capping, Adenylation domain of GTP-dependent mRNA capping enzymes | Back alignment and domain information |
|---|
Score = 264 bits (678), Expect = 6e-86
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 242 DKIVQLQNEIKDLC-NYERVGFPGSQPVSMDRNNIGYLAEKKYMVSWKADGTRYMMYIKN 300
+K+ +L+ ++ +LC +ER GFPGSQPVS R N+ L + Y V K+DG RY++ I
Sbjct: 1 EKLSELRRKVAELCPGWERGGFPGSQPVSFSRKNLELLKQNDYFVCEKSDGVRYLLLITG 60
Query: 301 ADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDRVQGQNIPRYLVYDIIR 360
E+Y DR ++K+ GL FP RK+ TLLDGE+VID+V G+ PRYL++DI+
Sbjct: 61 RGEVYLIDRKNDVFKVPGLFFPRRKNLEPHHQGTLLDGELVIDKVPGKKRPRYLIFDILA 120
Query: 361 FDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLS 420
F+ VT + + R++ IK E+IEPR+ ++ I+K EPFSVR+KDF+ + K L
Sbjct: 121 FNGQSVTEKPLSERLKYIKKEVIEPRNELLKKGPIDKAKEPFSVRLKDFFPLYKIEKLFE 180
Query: 421 DKF-TLCHEPDGLIFQPVDEPYVMGKAVDTLKWKP 454
L HE DGLIF P DEPYV G + LKWKP
Sbjct: 181 KIIPKLPHENDGLIFTPNDEPYVPGTDKNLLKWKP 215
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RNA capping enzymes transfer GMP from GTP to the 5'-diphosphate end of nascent mRNAs to form a G(5')ppp(5')RNA cap structure. The RNA cap is found only in eukarya. RNA capping is chemically analogous to the first two steps of polynucleotide ligation. ATP-dependent polynucleotide ligases catalyze phosphodiester bond formation of nicked nucleic acid substrates using the high energy nucleotide of ATP as a cofactor in a three step reaction mechanism. Structural studies reveal a shared structure for DNA ligases and capping enzymes, with a common catalytic core composed of an adenylation or nucleotidyltransferase domain and a C-terminal OB-fold domain containing conserved sequence motifs. The adenylation domain binds ATP and contains many active site residues. Length = 215 |
| >gnl|CDD|216438 pfam01331, mRNA_cap_enzyme, mRNA capping enzyme, catalytic domain | Back alignment and domain information |
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| >gnl|CDD|227551 COG5226, CEG1, mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >gnl|CDD|217793 pfam03919, mRNA_cap_C, mRNA capping enzyme, C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|185704 cd06846, Adenylation_DNA_ligase_like, Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases | Back alignment and domain information |
|---|
| >gnl|CDD|216117 pfam00782, DSPc, Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|216280 pfam01068, DNA_ligase_A_M, ATP dependent DNA ligase domain | Back alignment and domain information |
|---|
| >gnl|CDD|225297 COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| COG5226 | 404 | CEG1 mRNA capping enzyme, guanylyltransferase (alp | 100.0 | |
| KOG2386|consensus | 393 | 100.0 | ||
| PF01331 | 192 | mRNA_cap_enzyme: mRNA capping enzyme, catalytic do | 100.0 | |
| cd07895 | 215 | Adenylation_mRNA_capping Adenylation domain of GTP | 100.0 | |
| cd06846 | 182 | Adenylation_DNA_ligase_like Adenylation domain of | 99.96 | |
| TIGR02779 | 298 | NHEJ_ligase_lig DNA polymerase LigD, ligase domain | 99.93 | |
| PRK09247 | 539 | ATP-dependent DNA ligase; Validated | 99.92 | |
| cd07898 | 201 | Adenylation_DNA_ligase Adenylation domain of ATP-d | 99.92 | |
| PRK03180 | 508 | ligB ATP-dependent DNA ligase; Reviewed | 99.91 | |
| PHA02587 | 488 | 30 DNA ligase; Provisional | 99.91 | |
| cd07903 | 225 | Adenylation_DNA_ligase_IV Adenylation domain of DN | 99.9 | |
| TIGR00574 | 514 | dnl1 DNA ligase I, ATP-dependent (dnl1). All prote | 99.9 | |
| cd07897 | 207 | Adenylation_DNA_ligase_Bac1 Adenylation domain of | 99.9 | |
| PRK09632 | 764 | ATP-dependent DNA ligase; Reviewed | 99.9 | |
| PLN03113 | 744 | DNA ligase 1; Provisional | 99.9 | |
| cd07900 | 219 | Adenylation_DNA_ligase_I_Euk Adenylation domain of | 99.89 | |
| PRK08224 | 350 | ligC ATP-dependent DNA ligase; Reviewed | 99.89 | |
| cd08039 | 235 | Adenylation_DNA_ligase_Fungal Adenylation domain o | 99.89 | |
| PRK05972 | 860 | ligD ATP-dependent DNA ligase; Reviewed | 99.89 | |
| PHA00454 | 315 | ATP-dependent DNA ligase | 99.88 | |
| PRK01109 | 590 | ATP-dependent DNA ligase; Provisional | 99.88 | |
| cd07906 | 190 | Adenylation_DNA_ligase_LigD_LigC Adenylation domai | 99.88 | |
| cd09232 | 186 | Snurportin-1_C C-terminal m3G cap-binding domain o | 99.88 | |
| cd07901 | 207 | Adenylation_DNA_ligase_Arch_LigB Adenylation domai | 99.88 | |
| PRK09125 | 282 | DNA ligase; Provisional | 99.88 | |
| cd07905 | 194 | Adenylation_DNA_ligase_LigC Adenylation domain of | 99.88 | |
| PRK07636 | 275 | ligB ATP-dependent DNA ligase; Reviewed | 99.87 | |
| PRK09633 | 610 | ligD ATP-dependent DNA ligase; Reviewed | 99.87 | |
| cd07902 | 213 | Adenylation_DNA_ligase_III Adenylation domain of D | 99.87 | |
| PTZ00393 | 241 | protein tyrosine phosphatase; Provisional | 99.85 | |
| KOG1720|consensus | 225 | 99.85 | ||
| COG1793 | 444 | CDC9 ATP-dependent DNA ligase [DNA replication, re | 99.85 | |
| PTZ00242 | 166 | protein tyrosine phosphatase; Provisional | 99.85 | |
| PF01068 | 202 | DNA_ligase_A_M: ATP dependent DNA ligase domain; I | 99.82 | |
| PF03919 | 105 | mRNA_cap_C: mRNA capping enzyme, C-terminal domain | 99.8 | |
| smart00195 | 138 | DSPc Dual specificity phosphatase, catalytic domai | 99.77 | |
| PF00782 | 133 | DSPc: Dual specificity phosphatase, catalytic doma | 99.77 | |
| KOG2283|consensus | 434 | 99.77 | ||
| KOG1719|consensus | 183 | 99.75 | ||
| cd07896 | 174 | Adenylation_kDNA_ligase_like Adenylation domain of | 99.74 | |
| cd00127 | 139 | DSPc Dual specificity phosphatases (DSP); Ser/Thr | 99.72 | |
| TIGR02776 | 552 | NHEJ_ligase_prk DNA ligase D. Members of this prot | 99.7 | |
| KOG0966|consensus | 881 | 99.68 | ||
| KOG2836|consensus | 173 | 99.65 | ||
| PRK12361 | 547 | hypothetical protein; Provisional | 99.6 | |
| KOG2386|consensus | 393 | 99.58 | ||
| KOG1718|consensus | 198 | 99.5 | ||
| COG2453 | 180 | CDC14 Predicted protein-tyrosine phosphatase [Sign | 99.49 | |
| KOG1716|consensus | 285 | 99.39 | ||
| PF05706 | 168 | CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3) | 99.35 | |
| KOG1717|consensus | 343 | 99.35 | ||
| KOG0967|consensus | 714 | 99.33 | ||
| smart00404 | 105 | PTPc_motif Protein tyrosine phosphatase, catalytic | 99.2 | |
| smart00012 | 105 | PTPc_DSPc Protein tyrosine phosphatase, catalytic | 99.2 | |
| cd07894 | 342 | Adenylation_RNA_ligase Adenylation domain of RNA c | 99.15 | |
| PF03162 | 164 | Y_phosphatase2: Tyrosine phosphatase family; Inter | 99.08 | |
| PRK15375 | 535 | pathogenicity island 1 effector protein StpP; Prov | 99.01 | |
| cd00047 | 231 | PTPc Protein tyrosine phosphatases (PTP) catalyze | 98.97 | |
| TIGR01244 | 135 | conserved hypothetical protein TIGR01244. No membe | 98.86 | |
| smart00194 | 258 | PTPc Protein tyrosine phosphatase, catalytic domai | 98.81 | |
| PLN02727 | 986 | NAD kinase | 98.71 | |
| PF14566 | 149 | PTPlike_phytase: Inositol hexakisphosphate; PDB: 1 | 98.62 | |
| PHA02740 | 298 | protein tyrosine phosphatase; Provisional | 98.57 | |
| PF13350 | 164 | Y_phosphatase3: Tyrosine phosphatase family; PDB: | 98.52 | |
| PHA02742 | 303 | protein tyrosine phosphatase; Provisional | 98.51 | |
| PF00102 | 235 | Y_phosphatase: Protein-tyrosine phosphatase; Inter | 98.5 | |
| PHA02747 | 312 | protein tyrosine phosphatase; Provisional | 98.49 | |
| PHA02746 | 323 | protein tyrosine phosphatase; Provisional | 98.49 | |
| PHA02738 | 320 | hypothetical protein; Provisional | 98.37 | |
| KOG0790|consensus | 600 | 98.2 | ||
| PF04273 | 110 | DUF442: Putative phosphatase (DUF442); InterPro: I | 98.09 | |
| KOG0792|consensus | 1144 | 98.02 | ||
| COG2365 | 249 | Protein tyrosine/serine phosphatase [Signal transd | 97.87 | |
| KOG0791|consensus | 374 | 97.86 | ||
| COG5599 | 302 | PTP2 Protein tyrosine phosphatase [Signal transduc | 97.85 | |
| KOG1572|consensus | 249 | 97.81 | ||
| TIGR01209 | 374 | RNA ligase, Pab1020 family. Members of this family | 97.68 | |
| KOG3132|consensus | 325 | 97.67 | ||
| KOG0789|consensus | 415 | 97.51 | ||
| COG3453 | 130 | Uncharacterized protein conserved in bacteria [Fun | 97.04 | |
| COG1423 | 382 | ATP-dependent DNA ligase, homolog of eukaryotic li | 97.04 | |
| PF14671 | 141 | DSPn: Dual specificity protein phosphatase, N-term | 96.73 | |
| KOG4228|consensus | 1087 | 96.57 | ||
| COG5350 | 172 | Predicted protein tyrosine phosphatase [General fu | 96.51 | |
| KOG0793|consensus | 1004 | 96.33 | ||
| KOG4228|consensus | 1087 | 95.47 | ||
| PF09414 | 186 | RNA_ligase: RNA ligase; InterPro: IPR021122 This e | 95.21 | |
| PF01653 | 315 | DNA_ligase_aden: NAD-dependent DNA ligase adenylat | 95.09 | |
| smart00532 | 441 | LIGANc Ligase N family. | 94.43 | |
| cd00114 | 307 | LIGANc NAD+ dependent DNA ligase adenylation domai | 93.86 | |
| PF05098 | 450 | LEF-4: Late expression factor 4 (LEF-4); InterPro: | 93.65 | |
| TIGR00575 | 652 | dnlj DNA ligase, NAD-dependent. The member of this | 93.33 | |
| PRK07956 | 665 | ligA NAD-dependent DNA ligase LigA; Validated | 92.86 | |
| PRK14351 | 689 | ligA NAD-dependent DNA ligase LigA; Provisional | 92.74 | |
| KOG3673|consensus | 845 | 92.06 | ||
| PRK14350 | 669 | ligA NAD-dependent DNA ligase LigA; Provisional | 91.87 | |
| PHA02142 | 366 | putative RNA ligase | 91.62 | |
| PRK08097 | 562 | ligB NAD-dependent DNA ligase LigB; Reviewed | 90.38 | |
| PF14743 | 66 | DNA_ligase_OB_2: DNA ligase OB-like domain; PDB: 2 | 88.45 | |
| TIGR02307 | 325 | RNA_lig_RNL2 RNA ligase, Rnl2 family. Members of t | 87.72 | |
| cd01518 | 101 | RHOD_YceA Member of the Rhodanese Homology Domain | 86.96 | |
| TIGR02306 | 341 | RNA_lig_DRB0094 RNA ligase, DRB0094 family. The me | 83.06 | |
| PF04179 | 451 | Init_tRNA_PT: Initiator tRNA phosphoribosyl transf | 82.68 |
| >COG5226 CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-59 Score=454.01 Aligned_cols=306 Identities=32% Similarity=0.476 Sum_probs=260.4
Q ss_pred CCcceeccChHHHHHHHHHHHHHhCCC--CCCCCCCeeeccccccccccccCCcEEEEcCCceEEEEEEEe-----CCeE
Q psy9353 232 VSGVKALYDEDKIVQLQNEIKDLCNYE--RVGFPGSQPVSMDRNNIGYLAEKKYMVSWKADGTRYMMYIKN-----ADEI 304 (543)
Q Consensus 232 v~g~~~~~d~~~~~~l~~~v~~~~~~~--~~~FPG~qPVsl~r~~l~~l~~~~y~v~~K~DG~R~ll~i~~-----~~~v 304 (543)
+||+.++.| .++.|+.+|.++++.. ...|||||||||+.+|++.|..++|+||||+||+|+||+++. .-++
T Consensus 13 ~pG~~~P~d--i~~~Lkt~i~klL~~~~P~~tFpGsqPVsf~~~~i~~Ll~~dy~VCEKsDGvR~Ll~vte~p~tg~~~~ 90 (404)
T COG5226 13 RPGNKVPPD--IAEALKTKIYKLLCITEPRETFPGSQPVSFTLDNIGLLLNNDYLVCEKSDGVRALLLVTEEPVTGAFRG 90 (404)
T ss_pred cCCCcCCch--HHHHHHHHHHHHhCCCCCcccCCCCcceeeehhhHHHHHhCCeEEEEccCCeEEEEEEEecccCCCcce
Confidence 578766655 7899999999999975 388999999999999999999999999999999999999873 3469
Q ss_pred EEEECCCCeeEecCccCCCCCC---CCcCCCCeEEEEEEEEeccC--CccccEEEEEEEEEECCccccCCCHHHHHHHHH
Q psy9353 305 YFTDRDFSMYKISGLTFPHRKD---PNKRLTNTLLDGEMVIDRVQ--GQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIK 379 (543)
Q Consensus 305 yLidR~~~~~~v~~~~fP~~~~---~~~~~~~tlLDGElV~d~~~--~~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~ 379 (543)
||+||.|++|.+.+..||.... ....+.+|+||||+|.|... +-+++||++||||+++|.-++.++..+|++.|+
T Consensus 91 y~~DR~nnfY~v~~~f~p~~~~~k~ge~l~~dtlldgelV~d~~p~~k~~qlryl~fdcLa~~g~~~~~~~~s~Rl~~l~ 170 (404)
T COG5226 91 YFYDRRNNFYEVHTSFPPCSTVLKDGEVLLEDTLLDGELVFDCLPYEKVPQLRYLLFDCLAYAGMFVERMEKSERLKTLQ 170 (404)
T ss_pred EEEeccCceEEeccccCCcccccccCcEEeccceecceEEEEeccccchHHHHHHHHHHhhhcceeEeecchhhHHHHhh
Confidence 9999999999998887775533 22346899999999998653 335789999999999999999999999999999
Q ss_pred HhhhhhhHHHhhhhccccCCCCeEEEeccccchhhHhhhhccccc-cccCCceEEEeeCCCCcccCCCcceEEecCCcce
Q psy9353 380 VEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLSDKFT-LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMN 458 (543)
Q Consensus 380 ~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~-~~h~~DGLIf~~~~spY~~G~~~~~lKWKp~~~n 458 (543)
+++.+|+.......+++...-||.+.+|.+...++.-++++ +++ ++|++|||||||.+.||..|++..+|||||.++|
T Consensus 171 Ke~~kp~~~~r~s~~~~~~~fpf~~s~K~M~~syg~~ki~k-~ip~L~HgnDGLIFTp~~~PY~~Gkd~~lLKWKP~~~N 249 (404)
T COG5226 171 KEDEKPRERKRVSIEIDSGSFPFHFSVKQMLKSYGFWKIYK-KIPELKHGNDGLIFTPADEPYSVGKDGALLKWKPASLN 249 (404)
T ss_pred hhhcccHhhhhheeeccccccceeeeHHHHHhhhhHHHHHh-hcccccCCCCceEeccCCCCcccCccceeeecCccccC
Confidence 99999998877777778888999999999999999888887 677 9999999999999999999999999999999999
Q ss_pred eEEEEEEEEee-cCCC-----ccccceeeEeec-cCCcccccceeEEccc----c----cccCCcEEEEEEe-CCeeEEE
Q psy9353 459 SIDFLMKIETR-SGLG-----ILPTKVGKLYAG-SNRSQQQFAEMKITKA----T----KDLDGKIVECKWE-NNQWVFM 522 (543)
Q Consensus 459 tvDF~l~~~~~-~~~g-----~~~~~~~~L~v~-~~~~~~~f~~~~~t~e----~----~~~~g~IvEc~~~-~g~W~f~ 522 (543)
||||++.+... ...| ..|. ..|+|. |.+.+..|+.+++.++ + .++.++||||..+ .|.|+++
T Consensus 250 TiDF~lvl~~~~~e~~Dyny~~~p~--f~l~Vw~gRk~yrfFa~~~v~d~ew~~lk~~~~pl~~rivEc~l~~e~~W~~l 327 (404)
T COG5226 250 TIDFRLVLHKKWSEVDDYNYVCSPK--FGLDVWFGRKTYRFFASGEVIDGEWCELKYDCDPLYWRIVECVLKKEGAWKLL 327 (404)
T ss_pred ceeeeeeeccccccccCcceeeccc--ccccEEecccceeeeeeeEechHHHHHHhhhcccchhhHHHHHhccCCceEEE
Confidence 99999988643 1111 2232 345553 3344667888877653 2 5899999999999 4569999
Q ss_pred EeeCCCCCCChHHHHHHhhc
Q psy9353 523 RERTDKSFPNAVETAMGEWN 542 (543)
Q Consensus 523 R~R~DK~~pN~~~t~~~v~~ 542 (543)
|+|+||.+|||++||.+|++
T Consensus 328 rfRdDK~~~NhisvV~~VLe 347 (404)
T COG5226 328 RFRDDKDTPNHISVVCNVLE 347 (404)
T ss_pred EeecCCCCCchhhHHHHHHH
Confidence 99999999999999999986
|
|
| >KOG2386|consensus | Back alignment and domain information |
|---|
| >PF01331 mRNA_cap_enzyme: mRNA capping enzyme, catalytic domain; InterPro: IPR001339 The mRNA capping enzyme in yeasts is composed of two separate chains, alpha a mRNA guanyltransferase and beta an RNA 5'-triphosphate | Back alignment and domain information |
|---|
| >cd07895 Adenylation_mRNA_capping Adenylation domain of GTP-dependent mRNA capping enzymes | Back alignment and domain information |
|---|
| >cd06846 Adenylation_DNA_ligase_like Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases | Back alignment and domain information |
|---|
| >TIGR02779 NHEJ_ligase_lig DNA polymerase LigD, ligase domain | Back alignment and domain information |
|---|
| >PRK09247 ATP-dependent DNA ligase; Validated | Back alignment and domain information |
|---|
| >cd07898 Adenylation_DNA_ligase Adenylation domain of ATP-dependent DNA Ligases | Back alignment and domain information |
|---|
| >PRK03180 ligB ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PHA02587 30 DNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd07903 Adenylation_DNA_ligase_IV Adenylation domain of DNA Ligase IV | Back alignment and domain information |
|---|
| >TIGR00574 dnl1 DNA ligase I, ATP-dependent (dnl1) | Back alignment and domain information |
|---|
| >cd07897 Adenylation_DNA_ligase_Bac1 Adenylation domain of putative bacterial ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >PRK09632 ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PLN03113 DNA ligase 1; Provisional | Back alignment and domain information |
|---|
| >cd07900 Adenylation_DNA_ligase_I_Euk Adenylation domain of eukaryotic DNA Ligase I | Back alignment and domain information |
|---|
| >PRK08224 ligC ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >cd08039 Adenylation_DNA_ligase_Fungal Adenylation domain of uncharacterized fungal ATP-dependent DNA ligase-like proteins | Back alignment and domain information |
|---|
| >PRK05972 ligD ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PHA00454 ATP-dependent DNA ligase | Back alignment and domain information |
|---|
| >PRK01109 ATP-dependent DNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd07906 Adenylation_DNA_ligase_LigD_LigC Adenylation domain of Mycobacterium tuberculosis LigD and LigC-like ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >cd09232 Snurportin-1_C C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1 | Back alignment and domain information |
|---|
| >cd07901 Adenylation_DNA_ligase_Arch_LigB Adenylation domain of archaeal and bacterial LigB-like DNA ligases | Back alignment and domain information |
|---|
| >PRK09125 DNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd07905 Adenylation_DNA_ligase_LigC Adenylation domain of Mycobacterium tuberculosis LigC-like ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >PRK07636 ligB ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PRK09633 ligD ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >cd07902 Adenylation_DNA_ligase_III Adenylation domain of DNA Ligase III | Back alignment and domain information |
|---|
| >PTZ00393 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG1720|consensus | Back alignment and domain information |
|---|
| >COG1793 CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PTZ00242 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF01068 DNA_ligase_A_M: ATP dependent DNA ligase domain; InterPro: IPR012310 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalysing the formation of an internucleotide ester bond between phosphate and deoxyribose | Back alignment and domain information |
|---|
| >PF03919 mRNA_cap_C: mRNA capping enzyme, C-terminal domain; InterPro: IPR013846 This domain is found at the C terminus of the mRNA capping enzyme | Back alignment and domain information |
|---|
| >smart00195 DSPc Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >KOG2283|consensus | Back alignment and domain information |
|---|
| >KOG1719|consensus | Back alignment and domain information |
|---|
| >cd07896 Adenylation_kDNA_ligase_like Adenylation domain of kDNA ligases and similar proteins | Back alignment and domain information |
|---|
| >cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >TIGR02776 NHEJ_ligase_prk DNA ligase D | Back alignment and domain information |
|---|
| >KOG0966|consensus | Back alignment and domain information |
|---|
| >KOG2836|consensus | Back alignment and domain information |
|---|
| >PRK12361 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG2386|consensus | Back alignment and domain information |
|---|
| >KOG1718|consensus | Back alignment and domain information |
|---|
| >COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1716|consensus | Back alignment and domain information |
|---|
| >PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species | Back alignment and domain information |
|---|
| >KOG1717|consensus | Back alignment and domain information |
|---|
| >KOG0967|consensus | Back alignment and domain information |
|---|
| >smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif | Back alignment and domain information |
|---|
| >smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity | Back alignment and domain information |
|---|
| >cd07894 Adenylation_RNA_ligase Adenylation domain of RNA circularization proteins | Back alignment and domain information |
|---|
| >PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PRK15375 pathogenicity island 1 effector protein StpP; Provisional | Back alignment and domain information |
|---|
| >cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways | Back alignment and domain information |
|---|
| >TIGR01244 conserved hypothetical protein TIGR01244 | Back alignment and domain information |
|---|
| >smart00194 PTPc Protein tyrosine phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
| >PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B | Back alignment and domain information |
|---|
| >PHA02740 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B | Back alignment and domain information |
|---|
| >PHA02742 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PHA02747 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02746 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02738 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0790|consensus | Back alignment and domain information |
|---|
| >PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function | Back alignment and domain information |
|---|
| >KOG0792|consensus | Back alignment and domain information |
|---|
| >COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0791|consensus | Back alignment and domain information |
|---|
| >COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1572|consensus | Back alignment and domain information |
|---|
| >TIGR01209 RNA ligase, Pab1020 family | Back alignment and domain information |
|---|
| >KOG3132|consensus | Back alignment and domain information |
|---|
| >KOG0789|consensus | Back alignment and domain information |
|---|
| >COG3453 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG1423 ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF14671 DSPn: Dual specificity protein phosphatase, N-terminal half; PDB: 1OHD_A 1OHE_A 1OHC_A | Back alignment and domain information |
|---|
| >KOG4228|consensus | Back alignment and domain information |
|---|
| >COG5350 Predicted protein tyrosine phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0793|consensus | Back alignment and domain information |
|---|
| >KOG4228|consensus | Back alignment and domain information |
|---|
| >PF09414 RNA_ligase: RNA ligase; InterPro: IPR021122 This entry represents the RNA ligase domain | Back alignment and domain information |
|---|
| >PF01653 DNA_ligase_aden: NAD-dependent DNA ligase adenylation domain; InterPro: IPR013839 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose | Back alignment and domain information |
|---|
| >smart00532 LIGANc Ligase N family | Back alignment and domain information |
|---|
| >cd00114 LIGANc NAD+ dependent DNA ligase adenylation domain | Back alignment and domain information |
|---|
| >PF05098 LEF-4: Late expression factor 4 (LEF-4); InterPro: IPR007790 The baculovirus Autographa californica nuclear polyhedrosis virus (AcMNPV) virus encodes a DNA-dependent RNA polymerase that is required for transcription of viral late genes | Back alignment and domain information |
|---|
| >TIGR00575 dnlj DNA ligase, NAD-dependent | Back alignment and domain information |
|---|
| >PRK07956 ligA NAD-dependent DNA ligase LigA; Validated | Back alignment and domain information |
|---|
| >PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >KOG3673|consensus | Back alignment and domain information |
|---|
| >PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >PHA02142 putative RNA ligase | Back alignment and domain information |
|---|
| >PRK08097 ligB NAD-dependent DNA ligase LigB; Reviewed | Back alignment and domain information |
|---|
| >PF14743 DNA_ligase_OB_2: DNA ligase OB-like domain; PDB: 2Q2U_D 2Q2T_A 1FVI_A 1P8L_A | Back alignment and domain information |
|---|
| >TIGR02307 RNA_lig_RNL2 RNA ligase, Rnl2 family | Back alignment and domain information |
|---|
| >cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
| >TIGR02306 RNA_lig_DRB0094 RNA ligase, DRB0094 family | Back alignment and domain information |
|---|
| >PF04179 Init_tRNA_PT: Initiator tRNA phosphoribosyl transferase ; InterPro: IPR007306 This enzyme (2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 543 | ||||
| 3s24_A | 347 | Crystal Structure Of Human Mrna Guanylyltransferase | 9e-88 | ||
| 3rtx_A | 343 | Crystal Structure Of Mammalian Capping Enzyme (Mce1 | 1e-87 | ||
| 1i9s_A | 210 | Crystal Structure Of The Rna Triphosphatase Domain | 3e-42 | ||
| 2c46_A | 241 | Crystal Structure Of The Human Rna Guanylyltransfer | 5e-42 | ||
| 1i9t_A | 210 | Crystal Structure Of The Oxidized Rna Triphosphatas | 6e-41 | ||
| 1p16_A | 395 | Structure Of An Mrna Capping Enzyme Bound To The Ph | 3e-23 | ||
| 1ckm_A | 330 | Structure Of Two Different Conformations Of Mrna Ca | 2e-17 | ||
| 3kyh_C | 461 | Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatu | 6e-17 | ||
| 1ckn_B | 330 | Structure Of Guanylylated Mrna Capping Enzyme Compl | 9e-17 | ||
| 1yn9_A | 169 | Crystal Structure Of Baculovirus Rna 5'-Phosphatase | 8e-16 | ||
| 4erc_A | 150 | Structure Of Vhz Bound To Metavanadate Length = 150 | 4e-04 |
| >pdb|3S24|A Chain A, Crystal Structure Of Human Mrna Guanylyltransferase Length = 347 | Back alignment and structure |
|
| >pdb|3RTX|A Chain A, Crystal Structure Of Mammalian Capping Enzyme (Mce1) And Pol Ii Ctd Complex Length = 343 | Back alignment and structure |
| >pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of Mouse Mrna Capping Enzyme Length = 210 | Back alignment and structure |
| >pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And 5'-Phosphatase Length = 241 | Back alignment and structure |
| >pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase Domain Of Mouse Mrna Capping Enzyme Length = 210 | Back alignment and structure |
| >pdb|1P16|A Chain A, Structure Of An Mrna Capping Enzyme Bound To The Phosphorylated Carboxyl-Terminal Domain Of Rna Polymerase Ii Length = 395 | Back alignment and structure |
| >pdb|1CKM|A Chain A, Structure Of Two Different Conformations Of Mrna Capping Enzyme In Complex With Gtp Length = 330 | Back alignment and structure |
| >pdb|3KYH|C Chain C, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus Length = 461 | Back alignment and structure |
| >pdb|1CKN|B Chain B, Structure Of Guanylylated Mrna Capping Enzyme Complexed With Gtp Length = 330 | Back alignment and structure |
| >pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase Complexed With Phosphate Length = 169 | Back alignment and structure |
| >pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate Length = 150 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A Length = 343 | Back alignment and structure |
|---|
Score = 239 bits (611), Expect = 9e-75
Identities = 161/326 (49%), Positives = 209/326 (64%), Gaps = 7/326 (2%)
Query: 222 IAKNPTFMPG--VSGVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIGYLA 279
+ F+ G V GV + + K+ ++Q + C +E GFPG+QPVSMD+ NI L
Sbjct: 2 LKLGAIFLEGITVKGVTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIRLLE 61
Query: 280 EKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGE 339
+K Y VSWKADGTRYMM I +E++ DRD S++ +S L FP RKD L+NTLLDGE
Sbjct: 62 QKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLRMHLSNTLLDGE 121
Query: 340 MVIDRVQGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLA 399
M+ID+V GQ +PRYL+YDII+F+ V F R+Q I+ EII PRH M+ I+K
Sbjct: 122 MIIDKVNGQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMKTGLIDKTQ 181
Query: 400 EPFSVRVKDFWSVDKAGYLLSDKFT--LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTM 457
EPFSVR K F+ ++ + LL F + HE DGLIFQP Y G+ D LKWKP ++
Sbjct: 182 EPFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQP-IGKYKPGRCDDILKWKPPSL 240
Query: 458 NSIDFLMKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENN 517
NS+DF +KI G G+LP VG LY G + FA++K+TK K D KI+ECK+ENN
Sbjct: 241 NSVDFRLKITRMGGEGLLPQNVGLLYVGGYE--RPFAQIKVTKELKQYDNKIIECKFENN 298
Query: 518 QWVFMRERTDKSFPNAVETAMGEWNN 543
WVFMR+R DKSFPNA TAM N+
Sbjct: 299 SWVFMRQRIDKSFPNAYNTAMAVCNS 324
|
| >1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3 Length = 395 | Back alignment and structure |
|---|
| >1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B* Length = 330 | Back alignment and structure |
|---|
| >3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae} Length = 461 | Back alignment and structure |
|---|
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A Length = 241 | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} Length = 169 | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} Length = 167 | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Length = 348 | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Length = 159 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A Length = 189 | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* Length = 161 | Back alignment and structure |
|---|
| >3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens} Length = 579 | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Length = 212 | Back alignment and structure |
|---|
| >1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Length = 157 | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Length = 324 | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A Length = 339 | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} Length = 361 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| 3rtx_A | 343 | MRNA-capping enzyme; guanylyltransferase, RNA poly | 100.0 | |
| 3kyh_C | 461 | MRNA-capping enzyme subunit alpha; 5' modification | 100.0 | |
| 1p16_A | 395 | GTP--RNA, mRNA capping enzyme alpha subunit; guany | 100.0 | |
| 1ckm_A | 330 | MRNA capping enzyme; nucleotidyltransferase; HET: | 100.0 | |
| 1vs0_A | 310 | Putative DNA ligase-like protein RV0938/MT0965; OB | 99.96 | |
| 2cfm_A | 561 | Thermostable DNA ligase; protein-nucleotide comple | 99.95 | |
| 2c46_A | 241 | MRNA capping enzyme; phosphatase, transferase, hyd | 99.95 | |
| 1fvi_A | 297 | Chlorella virus DNA ligase-adenylate; adenylated D | 99.94 | |
| 1x9n_A | 688 | DNA ligase I; 5'-adenylated nicked DNA, protein-DN | 99.94 | |
| 2hiv_A | 621 | Thermostable DNA ligase; ATP-dependent, open confo | 99.94 | |
| 3gde_A | 558 | DNA ligase; DNA-binding domain, adenylation domain | 99.93 | |
| 1yn9_A | 169 | BVP, polynucleotide 5'-phosphatase; RNA triphospha | 99.92 | |
| 3l2p_A | 579 | DNA ligase 3; DNA ligase, DNA repair, ATP-binding, | 99.92 | |
| 1a0i_A | 348 | DNA ligase; DNA replication; HET: DNA ATP; 2.60A { | 99.91 | |
| 3v0d_A | 339 | Voltage-sensor containing phosphatase; PTP, hydrol | 99.87 | |
| 3n0a_A | 361 | Tyrosine-protein phosphatase auxilin; phosphatase- | 99.85 | |
| 3s4o_A | 167 | Protein tyrosine phosphatase-like protein; structu | 99.81 | |
| 3rgo_A | 157 | Protein-tyrosine phosphatase mitochondrial 1; phos | 99.8 | |
| 3rz2_A | 189 | Protein tyrosine phosphatase type IVA 1; tyrosine | 99.8 | |
| 1d5r_A | 324 | Phosphoinositide phosphotase PTEN; C2 domain, phos | 99.79 | |
| 1zzw_A | 149 | Dual specificity protein phosphatase 10; MKP, PTP, | 99.78 | |
| 3ezz_A | 144 | Dual specificity protein phosphatase 4; alpha/beta | 99.77 | |
| 1rxd_A | 159 | Protein tyrosine phosphatase type IVA, member 1; p | 99.77 | |
| 4erc_A | 150 | Dual specificity protein phosphatase 23; alpha bet | 99.77 | |
| 2img_A | 151 | Dual specificity protein phosphatase 23; DUSP23, V | 99.77 | |
| 3s4e_A | 144 | Dual specificity protein phosphatase 19; PTP, prot | 99.75 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 99.75 | |
| 2oud_A | 177 | Dual specificity protein phosphatase 10; A central | 99.75 | |
| 2e0t_A | 151 | Dual specificity phosphatase 26; conserved hypothe | 99.75 | |
| 2nt2_A | 145 | Protein phosphatase slingshot homolog 2; alpha/bet | 99.74 | |
| 3vnn_A | 139 | DNA ligase 4; non-homologous END joining, DNA repa | 99.74 | |
| 3f81_A | 183 | Dual specificity protein phosphatase 3; hydrolase, | 99.74 | |
| 2hcm_A | 164 | Dual specificity protein phosphatase; structural g | 99.74 | |
| 2hxp_A | 155 | Dual specificity protein phosphatase 9; human phos | 99.73 | |
| 3emu_A | 161 | Leucine rich repeat and phosphatase domain contain | 99.72 | |
| 1fpz_A | 212 | Cyclin-dependent kinase inhibitor 3; alpha-beta sa | 99.72 | |
| 3cm3_A | 176 | Late protein H1, dual specificity protein phosphat | 99.71 | |
| 2j16_A | 182 | SDP-1, tyrosine-protein phosphatase YIL113W; hydro | 99.71 | |
| 2g6z_A | 211 | Dual specificity protein phosphatase 5; alpha/beta | 99.71 | |
| 2r0b_A | 154 | Serine/threonine/tyrosine-interacting protein; str | 99.71 | |
| 1wrm_A | 165 | Dual specificity phosphatase 22; DSP, JNK, hydrola | 99.71 | |
| 1yz4_A | 160 | DUSP15, dual specificity phosphatase-like 15 isofo | 99.71 | |
| 2esb_A | 188 | Dual specificity protein phosphatase 18; alpha/bet | 99.7 | |
| 2wgp_A | 190 | Dual specificity protein phosphatase 14; MKP6, DUS | 99.69 | |
| 2y96_A | 219 | Dual specificity phosphatase DUPD1; hydrolase; 2.3 | 99.69 | |
| 2i6j_A | 161 | Ssoptp, sulfolobus solfataricus protein tyrosine p | 99.68 | |
| 2q05_A | 195 | Late protein H1, dual specificity protein phosphat | 99.68 | |
| 2pq5_A | 205 | Dual specificity protein phosphatase 13; hydrolase | 99.66 | |
| 3nme_A | 294 | Ptpkis1 protein, SEX4 glucan phosphatase; dual spe | 99.56 | |
| 1xri_A | 151 | AT1G05000; structural genomics, protein structure | 99.53 | |
| 3mmj_A | 314 | MYO-inositol hexaphosphate phosphohydrolase; phyta | 99.26 | |
| 2f46_A | 156 | Hypothetical protein; structural genomics, joint c | 99.15 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 99.1 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 99.04 | |
| 1fpr_A | 284 | Protein-tyrosine phosphatase 1C; protein tyrosine | 99.04 | |
| 1p15_A | 253 | Protein-tyrosine phosphatase alpha; transmembrane, | 99.03 | |
| 2hc1_A | 291 | Receptor-type tyrosine-protein phosphatase beta; p | 99.01 | |
| 1g4w_R | 383 | Protein tyrosine phosphatase SPTP; virulence facto | 98.99 | |
| 3b7o_A | 316 | Tyrosine-protein phosphatase non-receptor type 11; | 98.98 | |
| 2cm2_A | 304 | Tyrosine-protein phosphatase non-receptor type 1; | 98.96 | |
| 1jln_A | 297 | STEP-like ptpase, protein tyrosine phosphatase, re | 98.95 | |
| 2b49_A | 287 | Protein tyrosine phosphatase, non-receptor type 3; | 98.94 | |
| 4grz_A | 288 | Tyrosine-protein phosphatase non-receptor type 6; | 98.93 | |
| 2bzl_A | 325 | Tyrosine-protein phosphatase, non-receptor type 14 | 98.93 | |
| 4az1_A | 302 | Tyrosine specific protein phosphatase; hydrolase, | 98.91 | |
| 2oc3_A | 303 | Tyrosine-protein phosphatase non-receptor type 18; | 98.91 | |
| 3qwu_A | 370 | DNA ligase; structural genomics, PSI-2, midwest ce | 98.9 | |
| 2ooq_A | 286 | Receptor-type tyrosine-protein phosphatase T; prot | 98.89 | |
| 1wch_A | 315 | Protein tyrosine phosphatase, non-receptor type 13 | 98.88 | |
| 2cjz_A | 305 | Human protein tyrosine phosphatase PTPN5; protein | 98.88 | |
| 2i75_A | 320 | Tyrosine-protein phosphatase non-receptor type 4; | 98.88 | |
| 1zc0_A | 309 | Tyrosine-protein phosphatase, non-receptor type 7; | 98.88 | |
| 2p6x_A | 309 | Tyrosine-protein phosphatase non-receptor type 22; | 98.87 | |
| 1l8k_A | 314 | T-cell protein-tyrosine phosphatase; hydrolase; 2. | 98.87 | |
| 1yfo_A | 302 | D1, receptor protein tyrosine phosphatase alpha; h | 98.84 | |
| 2gjt_A | 295 | Receptor-type tyrosine-protein phosphatase PTPro; | 98.84 | |
| 3m4u_A | 306 | Tyrosine specific protein phosphatase, putative; p | 98.83 | |
| 3i36_A | 342 | Vascular protein tyrosine phosphatase 1; PTP, hydr | 98.83 | |
| 2i1y_A | 301 | Receptor-type tyrosine-protein phosphatase; recept | 98.83 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.81 | |
| 2h4v_A | 320 | Receptor-type tyrosine-protein phosphatase gamma; | 98.78 | |
| 2b3o_A | 532 | Tyrosine-protein phosphatase, non-receptor type 6; | 98.72 | |
| 3s3e_A | 307 | Tyrosine-protein phosphatase 10D; differentiation, | 98.71 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 98.7 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 98.69 | |
| 4i8n_A | 354 | Tyrosine-protein phosphatase non-receptor type 1; | 98.69 | |
| 4ge6_A | 314 | Tyrosine-protein phosphatase non-receptor type 9; | 98.68 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 98.66 | |
| 1lyv_A | 306 | Protein-tyrosine phosphatase YOPH; toxin, hydrolas | 98.66 | |
| 1xk5_A | 204 | Snurportin-1; protein-RNA-complex, transport prote | 98.65 | |
| 2shp_A | 525 | SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin | 98.65 | |
| 2vug_A | 389 | PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transfe | 98.64 | |
| 3ps5_A | 595 | Tyrosine-protein phosphatase non-receptor type 6; | 98.6 | |
| 1ywf_A | 296 | Phosphotyrosine protein phosphatase PTPB; four str | 98.6 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 98.58 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 98.58 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 98.51 | |
| 3gjx_B | 365 | Snurportin-1; transport, cytoplasm, nucleus, RNA-b | 98.44 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 98.39 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 98.34 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 97.2 | |
| 1ta8_A | 332 | DNA ligase, NAD-dependent; nucleotidyl transferase | 96.51 | |
| 1s68_A | 249 | RNA ligase 2; ribonucleic acid ligase, RNA repair; | 96.38 | |
| 1b04_A | 318 | Protein (DNA ligase); DNA replication; 2.80A {Geob | 96.37 | |
| 2hvq_A | 335 | ORF1, hypothetical 37.6 kDa protein in GP24-HOC in | 95.92 | |
| 4glx_A | 586 | DNA ligase; inhibitor, ligase-ligase inhibitor-DNA | 94.23 | |
| 4glw_A | 305 | DNA ligase; inhibitor, ligase-ligase inhibitor com | 93.61 | |
| 1zau_A | 328 | DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacteriu | 92.93 | |
| 2c46_A | 241 | MRNA capping enzyme; phosphatase, transferase, hyd | 91.6 | |
| 2owo_A | 671 | DNA ligase; protein-DNA complex, ligase-DNA comple | 89.17 | |
| 3sgi_A | 615 | DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tub | 89.08 | |
| 3jsl_A | 318 | DNA ligase; NAD+-dependent, DNA damage, DNA repair | 88.97 | |
| 3uq8_A | 322 | DNA ligase; adenylated protein, ATP-grAsp, rossman | 88.64 | |
| 1xdn_A | 277 | RNA editing ligase MP52; HET: MSE ATP; 1.20A {Tryp | 88.11 | |
| 1dgs_A | 667 | DNA ligase; AMP complex, NAD+-dependent; HET: DNA | 85.79 |
| >3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-81 Score=646.20 Aligned_cols=317 Identities=50% Similarity=0.905 Sum_probs=223.1
Q ss_pred CCCCCccCCCC--cceeccChHHHHHHHHHHHHHhCCCCCCCCCCeeeccccccccccccCCcEEEEcCCceEEEEEEEe
Q psy9353 223 AKNPTFMPGVS--GVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIGYLAEKKYMVSWKADGTRYMMYIKN 300 (543)
Q Consensus 223 ~~~~~~~~~v~--g~~~~~d~~~~~~l~~~v~~~~~~~~~~FPG~qPVsl~r~~l~~l~~~~y~v~~K~DG~R~ll~i~~ 300 (543)
..+++||||+| ||++++|++.+.+||++|++||||+..+|||||||||+|+||+.|.+++|+|||||||+|+||++.+
T Consensus 3 ~~~~~f~~~~~v~gv~~v~~~~~~~~l~~~v~~~~~~~~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~~ 82 (343)
T 3rtx_A 3 KLGAIFLEGITVKGVTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDG 82 (343)
T ss_dssp CTTCCSSSSSCCTTEEECCCTTHHHHHHHHHHHHTTCCSSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEECS
T ss_pred ccCCeecCCcccCCeEEeCChHHHHHHHHHHHHHhCCCCCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEEc
Confidence 34799999987 9999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCeEEEEECCCCeeEecCccCCCCCCCCcCCCCeEEEEEEEEeccCCccccEEEEEEEEEECCccccCCCHHHHHHHHHH
Q psy9353 301 ADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDRVQGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKV 380 (543)
Q Consensus 301 ~~~vyLidR~~~~~~v~~~~fP~~~~~~~~~~~tlLDGElV~d~~~~~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~ 380 (543)
++++||+||+|+++.+++.+||+..++..+..+||||||||+++.+|...++|+|||+|+++|++++++||.+|+++|++
T Consensus 83 ~~~v~L~sR~~~~~~~~~~~FP~~~~~~~~~~~tvLDGElV~~~~~g~~~~~~~~FDlL~~~G~dl~~~pl~eR~~~L~~ 162 (343)
T 3rtx_A 83 TNEVFMIDRDNSVFHVSNLEFPFRKDLRMHLSNTLLDGEMIIDKVNGQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIER 162 (343)
T ss_dssp TTCEEEECTTCCEEEETTCCCEETTEEEEECCSEEEEEEEEEEESSSSEEEEEEEEEEEEBTTBCGGGSCHHHHHHHHHH
T ss_pred CCEEEEEeCCCCeEEeccccCCcchhhhccCCCeEEEEEEEEecCCCcEeeEEEEEEEEeECCcCcccCCHHHHHHHHHH
Confidence 57999999999999887789998766544568999999999987677777899999999999999999999999999999
Q ss_pred hhhhhhHHHhhhhccccCCCCeEEEeccccchhhHhhhhccccc--cccCCceEEEeeCCCCcccCCCcceEEecCCcce
Q psy9353 381 EIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLSDKFT--LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMN 458 (543)
Q Consensus 381 ~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~--~~h~~DGLIf~~~~spY~~G~~~~~lKWKp~~~n 458 (543)
+|+.|+.++++++++....+||.|+.|+||++++++++|++.+. +.|++|||||||.+ ||.+||+++||||||+++|
T Consensus 163 ~i~~p~~~~~~~~~~~~~~~pf~vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~~~~~lKwKp~~~~ 241 (343)
T 3rtx_A 163 EIISPRHEKMKTGLIDKTQEPFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGRCDDILKWKPPSLN 241 (343)
T ss_dssp HTHHHHHHHHHHSSCCTTTSSSEEEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEEEEEEEEECCSTTC
T ss_pred HhhhHHHHHhhcccccccCCCcEEEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCCCcceEEEecCcce
Confidence 99999999999999888999999999999999999999953455 89999999999998 9999999999999999999
Q ss_pred eEEEEEEEEeecCCCccccceeeEeeccCCcccccceeEEcccccccCCcEEEEEEeCCeeEEEEeeCCCCCCChHHHHH
Q psy9353 459 SIDFLMKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENNQWVFMRERTDKSFPNAVETAM 538 (543)
Q Consensus 459 tvDF~l~~~~~~~~g~~~~~~~~L~v~~~~~~~~f~~~~~t~e~~~~~g~IvEc~~~~g~W~f~R~R~DK~~pN~~~t~~ 538 (543)
||||+|++....+.|++|..++.|||++. ++||+.|++|++++++||+||||+|++|+|+|||+|+||++||+++||.
T Consensus 242 tvDF~l~~~~~~~~g~~~~~~~~l~~~g~--~~~f~~~~~t~~l~~ld~~IvEC~~~~~~W~~~R~R~DK~~pN~~~tv~ 319 (343)
T 3rtx_A 242 SVDFRLKITRMGGEGLLPQNVGLLYVGGY--ERPFAQIKVTKELKQYDNKIIECKFENNSWVFMRQRIDKSFPNAYNTAM 319 (343)
T ss_dssp C-------------------------------------------------------------------------CHHHHH
T ss_pred EEEEEEEecccCCCCccccccceEEECCe--eeecceeeccccchhcCCEEEEEEEECCEEEEEEEcCCCCCCchHHHHH
Confidence 99999999887788899999999999876 7899999999999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy9353 539 GEWN 542 (543)
Q Consensus 539 ~v~~ 542 (543)
+||+
T Consensus 320 ~v~~ 323 (343)
T 3rtx_A 320 AVCN 323 (343)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
|
| >3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3 | Back alignment and structure |
|---|
| >1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B* | Back alignment and structure |
|---|
| >1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A* | Back alignment and structure |
|---|
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A | Back alignment and structure |
|---|
| >1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A* | Back alignment and structure |
|---|
| >1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1 | Back alignment and structure |
|---|
| >2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A* | Back alignment and structure |
|---|
| >3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} | Back alignment and structure |
|---|
| >3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1 | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 | Back alignment and structure |
|---|
| >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A | Back alignment and structure |
|---|
| >4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} | Back alignment and structure |
|---|
| >3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A* | Back alignment and structure |
|---|
| >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A | Back alignment and structure |
|---|
| >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* | Back alignment and structure |
|---|
| >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A | Back alignment and structure |
|---|
| >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} | Back alignment and structure |
|---|
| >2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens} | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* | Back alignment and structure |
|---|
| >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} | Back alignment and structure |
|---|
| >2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A | Back alignment and structure |
|---|
| >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A | Back alignment and structure |
|---|
| >3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A | Back alignment and structure |
|---|
| >2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A | Back alignment and structure |
|---|
| >1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A | Back alignment and structure |
|---|
| >1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S | Back alignment and structure |
|---|
| >3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A* | Back alignment and structure |
|---|
| >2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ... | Back alignment and structure |
|---|
| >1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A | Back alignment and structure |
|---|
| >2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens} | Back alignment and structure |
|---|
| >4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A* | Back alignment and structure |
|---|
| >2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi} | Back alignment and structure |
|---|
| >2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A | Back alignment and structure |
|---|
| >1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A* | Back alignment and structure |
|---|
| >2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
| >1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A | Back alignment and structure |
|---|
| >2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A* | Back alignment and structure |
|---|
| >1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A | Back alignment and structure |
|---|
| >3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A | Back alignment and structure |
|---|
| >2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A | Back alignment and structure |
|---|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
| >2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A | Back alignment and structure |
|---|
| >2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* | Back alignment and structure |
|---|
| >3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A* | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A* | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A | Back alignment and structure |
|---|
| >1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 | Back alignment and structure |
|---|
| >2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5} | Back alignment and structure |
|---|
| >3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A* | Back alignment and structure |
|---|
| >1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4 | Back alignment and structure |
|---|
| >1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2 | Back alignment and structure |
|---|
| >2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A* | Back alignment and structure |
|---|
| >4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A | Back alignment and structure |
|---|
| >2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A* | Back alignment and structure |
|---|
| >3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A* | Back alignment and structure |
|---|
| >1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4 | Back alignment and structure |
|---|
| >1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 543 | ||||
| d1p16a2 | 245 | d.142.2.3 (A:1-245) mRNA capping enzyme alpha subu | 2e-43 | |
| d1ckma2 | 228 | d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA | 2e-35 | |
| d1i9sa_ | 194 | c.45.1.1 (A:) mRNA capping enzyme, triphosphatase | 1e-29 | |
| d1ckma1 | 89 | b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA | 9e-14 | |
| d1p16a1 | 145 | b.40.4.6 (A:246-390) mRNA capping enzyme alpha sub | 8e-12 | |
| d1ohea2 | 182 | c.45.1.1 (A:199-380) Proline directed phosphatase | 3e-10 | |
| d1rxda_ | 152 | c.45.1.1 (A:) Protein tyrosine phosphatase type IV | 7e-10 | |
| d1d5ra2 | 174 | c.45.1.1 (A:14-187) Phoshphoinositide phosphatase | 1e-06 | |
| d2pt0a1 | 313 | c.45.1.4 (A:34-346) Myo-inositol hexaphosphate pho | 2e-05 | |
| d1x9na3 | 220 | d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human ( | 3e-05 | |
| d1m3ga_ | 145 | c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien | 4e-05 | |
| d1fpza_ | 176 | c.45.1.1 (A:) Kinase associated phosphatase (kap) | 5e-05 | |
| d1vhra_ | 178 | c.45.1.1 (A:) VH1-related dual-specificity phospha | 1e-04 |
| >d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: DNA ligase/mRNA capping enzyme, catalytic domain family: mRNA capping enzyme domain: mRNA capping enzyme alpha subunit species: Yeast (Candida albicans) [TaxId: 5476]
Score = 152 bits (385), Expect = 2e-43
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 14/238 (5%)
Query: 229 MPGVSGVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIG-YLAEKKYMVSW 287
+P + G K DE++ +L+ + +L GFPGSQPVS +R ++ L +K Y V
Sbjct: 9 IPVIPGNKL--DEEETKELRLMVAELLGRRNTGFPGSQPVSFERRHLEETLMQKDYFVCE 66
Query: 288 KADGTRYMMYIKNAD----EIYFTDRDFSMYKISGLTFPHRKDPNKR----LTNTLLDGE 339
K DG R ++++ N ++ R+ Y I + FP + + TLLDGE
Sbjct: 67 KTDGLRCLLFLINDPDKGEGVFLVTRENDYYFIPNIHFPLSVNETREKPTYHHGTLLDGE 126
Query: 340 MVIDR-VQGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENS--RIN 396
+V++ + + RY+++D + + + R+ I +++P +++ +N
Sbjct: 127 LVLENRNVSEPVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPFDNFKKHNPDIVN 186
Query: 397 KLAEPFSVRVKDFWSVDKAGYLLSDKFTLCHEPDGLIFQPVDEPYVMGKAVDTLKWKP 454
PF V K + A +LS L H DGLI+ + PYV G LKWKP
Sbjct: 187 SPEFPFKVGFKTMLTSYHADDVLSKMDKLFHASDGLIYTCAETPYVFGTDQTLLKWKP 244
|
| >d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} Length = 228 | Back information, alignment and structure |
|---|
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 194 | Back information, alignment and structure |
|---|
| >d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]} Length = 89 | Back information, alignment and structure |
|---|
| >d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} Length = 145 | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} Length = 182 | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} Length = 152 | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} Length = 313 | Back information, alignment and structure |
|---|
| >d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]} Length = 220 | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} Length = 178 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| d1p16a2 | 245 | mRNA capping enzyme alpha subunit {Yeast (Candida | 100.0 | |
| d1ckma2 | 228 | RNA guanylyltransferase (mRNA capping enzyme), N-t | 100.0 | |
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 99.97 | |
| d1x9na3 | 220 | DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: | 99.89 | |
| d1d5ra2 | 174 | Phoshphoinositide phosphatase Pten (Pten tumor sup | 99.85 | |
| d1ohea2 | 182 | Proline directed phosphatase CDC14b2 {Human (Homo | 99.84 | |
| d1rxda_ | 152 | Protein tyrosine phosphatase type IVa {Human (Homo | 99.83 | |
| d1fpza_ | 176 | Kinase associated phosphatase (kap) {Human (Homo s | 99.83 | |
| d1a0ia2 | 239 | ATP-dependent DNA ligase, N-terminal domain {Bacte | 99.73 | |
| d1vhra_ | 178 | VH1-related dual-specificity phosphatase, VHR {Hum | 99.72 | |
| d1mkpa_ | 144 | Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp | 99.71 | |
| d1m3ga_ | 145 | Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax | 99.66 | |
| d1p16a1 | 145 | mRNA capping enzyme alpha subunit {Yeast (Candida | 99.57 | |
| d1ckma1 | 89 | RNA guanylyltransferase (mRNA capping enzyme) {Chl | 99.53 | |
| d1fvia2 | 188 | ATP-dependent DNA ligase, N-terminal domain {Chlor | 99.53 | |
| d1xria_ | 151 | Putative phosphatase At1g05000 {Thale cress (Arabi | 99.34 | |
| d2pt0a1 | 313 | Myo-inositol hexaphosphate phosphohydrolase (phyta | 99.02 | |
| d1g4us2 | 243 | SptP tyrosine phosphatase, catalytic domain {Salmo | 98.83 | |
| d2shpa1 | 307 | Tyrosine phosphatase {Human (Homo sapiens), shp-2 | 98.66 | |
| d1wcha_ | 308 | Tyrosine-protein phosphatase, non-receptor type 13 | 98.64 | |
| d1l8ka_ | 273 | Tyrosine phosphatase {Human (Homo sapiens), T-cell | 98.6 | |
| d1p15a_ | 245 | Protein-tyrosine phosphatase alpha {Mouse (Mus mus | 98.59 | |
| d1jlna_ | 297 | Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl | 98.58 | |
| d1lara2 | 249 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 98.56 | |
| d1fpra_ | 284 | Tyrosine phosphatase {Human (Homo sapiens), shp-1 | 98.56 | |
| d2f71a1 | 297 | Tyrosine phosphatase {Human (Homo sapiens), 1B [Ta | 98.54 | |
| d1lyva_ | 283 | Protein-tyrosine phosphatase YopH, catalytic domai | 98.5 | |
| d1lara1 | 317 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 98.5 | |
| d1yfoa_ | 288 | Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: | 98.5 | |
| d1rpma_ | 278 | Tyrosine phosphatase {Human (Homo sapiens), mu [Ta | 98.48 | |
| d1s68a_ | 233 | RNA ligase 2, N-terminal domain {Bacteriophage T4 | 98.4 | |
| d1ywfa1 | 272 | Phosphotyrosine protein phosphatase PtpB {Mycobact | 97.96 | |
| d1ohea1 | 157 | Proline directed phosphatase CDC14b2 {Human (Homo | 97.31 | |
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 96.7 | |
| d1b04a_ | 312 | Adenylation domain of NAD+-dependent DNA ligase {B | 94.42 | |
| d1ta8a_ | 313 | Adenylation domain of NAD+-dependent DNA ligase {E | 92.95 | |
| d1dgsa3 | 314 | Adenylation domain of NAD+-dependent DNA ligase {T | 91.2 | |
| d1xdna_ | 265 | RNA editing ligase MP52 {Trypanosoma brucei [TaxId | 86.09 |
| >d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: DNA ligase/mRNA capping enzyme, catalytic domain family: mRNA capping enzyme domain: mRNA capping enzyme alpha subunit species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=1e-45 Score=364.51 Aligned_cols=228 Identities=30% Similarity=0.564 Sum_probs=195.1
Q ss_pred CCCccCCCCcceeccChHHHHHHHHHHHHHhCCCCCCCCCCeeecccccccc-ccccCCcEEEEcCCceEEEEEEEe---
Q psy9353 225 NPTFMPGVSGVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIG-YLAEKKYMVSWKADGTRYMMYIKN--- 300 (543)
Q Consensus 225 ~~~~~~~v~g~~~~~d~~~~~~l~~~v~~~~~~~~~~FPG~qPVsl~r~~l~-~l~~~~y~v~~K~DG~R~ll~i~~--- 300 (543)
...-|++|||+.+ +++.+.+||..|+++|||+..+|||||||||+|+|+. .|.+++|+||||+||+||||++..
T Consensus 5 ~~~~~~~~pg~~~--~~~~~~~~~~~v~~~~~~~~~~FpG~qPvs~~~~~~~~~L~~~~Y~v~eK~DG~R~lL~i~~~~~ 82 (245)
T d1p16a2 5 EEREIPVIPGNKL--DEEETKELRLMVAELLGRRNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPD 82 (245)
T ss_dssp SCCCCCCCSSEEC--CHHHHHHHHHHHHHHHTCSCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEETT
T ss_pred ccCCCCCCCCCcC--CHHHHHHHHHHHHHHHCCCCCCCCCCCcccccHHHHHhhhCcCCEEEEECcCCeEEEEEEEEcCC
Confidence 3456788999854 7789999999999999999999999999999999996 488889999999999999999853
Q ss_pred -CCeEEEEECCCCeeEecCccCCCCCCC----CcCCCCeEEEEEEEEecc-CCccccEEEEEEEEEECCccccCCCHHHH
Q psy9353 301 -ADEIYFTDRDFSMYKISGLTFPHRKDP----NKRLTNTLLDGEMVIDRV-QGQNIPRYLVYDIIRFDNNDVTRQKFTTR 374 (543)
Q Consensus 301 -~~~vyLidR~~~~~~v~~~~fP~~~~~----~~~~~~tlLDGElV~d~~-~~~~~~~ylifDil~~~G~~v~~~p~~eR 374 (543)
.+.+||+||+++++.+++..||..... ...+.+|+||||++.++. .++..++|+|||+++++|+++++.||.+|
T Consensus 83 ~~~~~~li~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~tilDGElv~~~~~~~~~~~~~~ifDil~~~g~~l~~~~l~~R 162 (245)
T d1p16a2 83 KGEGVFLVTRENDYYFIPNIHFPLSVNETREKPTYHHGTLLDGELVLENRNVSEPVLRYVIFDALAIHGKCIIDRPLPKR 162 (245)
T ss_dssp TEEEEEEEETTCCEEECCSCCCCSCTTCCSSSCCCCSSEEEEEEEEEECCSSSCCEEEEEEEEEEEETTEECTTSCHHHH
T ss_pred CceEEEEEeCCCCeEEccccccccccccccccccccCCeeEEEEEEeecccCCcceEEEEEeeehhhCCceeeeccHHHH
Confidence 246899999999999888888866432 234578999999999764 34556799999999999999999999999
Q ss_pred HHHHHHhhhhhhHHHhhhh--ccccCCCCeEEEeccccchhhHhhhhccccc-cccCCceEEEeeCCCCcccCCCcceEE
Q psy9353 375 IQIIKVEIIEPRHRAMENS--RINKLAEPFSVRVKDFWSVDKAGYLLSDKFT-LCHEPDGLIFQPVDEPYVMGKAVDTLK 451 (543)
Q Consensus 375 ~~~L~~~i~~p~~~~~~~~--~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~-~~h~~DGLIf~~~~spY~~G~~~~~lK 451 (543)
+++|++.+..++....... .......+|.+..|+|+.++.+.++++ .+. +.|++|||||||.++||++||+..|||
T Consensus 163 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~-~~~~~~~~~DGLIf~p~~~pY~~Gr~~~~lK 241 (245)
T d1p16a2 163 LGYITENVMKPFDNFKKHNPDIVNSPEFPFKVGFKTMLTSYHADDVLS-KMDKLFHASDGLIYTCAETPYVFGTDQTLLK 241 (245)
T ss_dssp HHHHHHHTHHHHHHHHHHCHHHHSCTTSCCEEEECCCEEGGGTHHHHT-TGGGCSSCEEEEEEEESSSCCCSEEEEEEEE
T ss_pred HHHHHHHHHHhhhhhhhcccccccchhhhhhhhhhhhhhHHHHHHHHH-HhhhcCCCCCeEEEEcCCCCEeCCCCCCeEE
Confidence 9999999988776544322 223456789999999999999999987 455 899999999999999999999999999
Q ss_pred ecCC
Q psy9353 452 WKPH 455 (543)
Q Consensus 452 WKp~ 455 (543)
|||.
T Consensus 242 WKP~ 245 (245)
T d1p16a2 242 WKPA 245 (245)
T ss_dssp ECCG
T ss_pred eCCC
Confidence 9983
|
| >d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a0ia2 d.142.2.1 (A:2-240) ATP-dependent DNA ligase, N-terminal domain {Bacteriophage T7 [TaxId: 10760]} | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} | Back information, alignment and structure |
|---|
| >d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]} | Back information, alignment and structure |
|---|
| >d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1s68a_ d.142.2.4 (A:) RNA ligase 2, N-terminal domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ta8a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]} | Back information, alignment and structure |
|---|
| >d1xdna_ d.142.2.4 (A:) RNA editing ligase MP52 {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|