Psyllid ID: psy9360

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230------
Protein Sequence
MDHLDDTPDQSFRNMFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSIL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHccccccccccccccHHHHHHccccHHHccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHccccccccccccccccccEccccHHHEHEcccccccccccccccccccHHHHHHHHHHcccccccEcccHHccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEcEcccccHHHHHHHHHHccccccccccccEccccccc
Coil and Loop (DISEMBL)
mdhlddtpdqsfrnmfggdevcwestnsgwsnngfnqntrtasNDIYAEHLQLSEEIMKKSLQEDEKIFEKEklhvctyedcnSVFQTQAEWEEHARMHavqrpfgcrycdkafktsgdlskhsaihngdrpykcnytscgrhfrthTQRQIherchldskpyschvcgrsfisnthknnhlrihyglkpyvchvegckrkfvdlsslkkhtkihtqqtfhcnlCNKTYKHQQSIL
Flexible Loop (DISEMBL)
mdhlddtpdqsfrnmFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGdlskhsaihngdrpykCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKihtqqtfhcnlCNKTYKHQQSIL
Low Complexity Region (SEG)
MDHLDDTPDQSFRNMFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSIL
Disordered region (IsUnstruct)
***************FGGDEVCWESTNSGWS**************IYAEHL***************KIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTY*******
Disordered Region (DISOPRED)
********************VCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSIL
Disordered Region (DISEMBL)
MDHLDDTPDQSFRNMFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSIL
Disordered Region (DISPRO)
*****DTPDQSFRNMFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYK******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDHLDDTPDQSFRNMFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	236	2.2.26 [Sep-21-2011]
P36508	570	Zinc finger protein 76 OS	yes	N/A	0.737	0.305	0.407	6e-36
Q8BMU0	568	Zinc finger protein 76 OS	yes	N/A	0.737	0.306	0.407	8e-36
B4F7E9	568	Zinc finger protein 76 OS	yes	N/A	0.737	0.306	0.407	1e-35
Q1LYE3	623	Zinc finger protein 143 O	yes	N/A	0.716	0.271	0.431	2e-35
P52747	638	Zinc finger protein 143 O	no	N/A	0.652	0.241	0.459	3e-35
A6QQW0	613	Zinc finger protein 143 O	no	N/A	0.716	0.275	0.431	3e-35
Q58DZ6	567	Zinc finger protein 143 O	yes	N/A	0.716	0.298	0.431	5e-35
Q91853	565	Zinc finger protein 143 O	N/A	N/A	0.716	0.299	0.431	5e-35
Q5XIU2	638	Zinc finger protein 143 O	no	N/A	0.716	0.264	0.431	2e-34
O70230	638	Zinc finger protein 143 O	no	N/A	0.716	0.264	0.431	2e-34

>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2

 Score =  150 bits (380), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 5/179 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct: 182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C    CGR F S T+
Sbjct: 242 LQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATN 301

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct: 302 YKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 360

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q8BMU0|ZNF76_MOUSE Zinc finger protein 76 OS=Mus musculus GN=Znf76 PE=2 SV=1

 Score =  150 bits (379), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 5/179 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct: 182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C    CGR F S T+
Sbjct: 242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATN 301

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct: 302 YKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTL 360

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1

 Score =  150 bits (378), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 5/179 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct: 182 LKVHERAHTGDRSYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C    CGR F S T+
Sbjct: 242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATN 301

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct: 302 YKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTL 360

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

>sp|Q1LYE3|ZN143_DANRE Zinc finger protein 143 OS=Danio rerio GN=znf143 PE=2 SV=2

 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 5/174 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD 119
           L+  E+    +K ++C +  C   F T    + H R H  ++P+ C+   C K+FKTSGD
Sbjct: 247 LKVHERSHTGDKPYICDHLGCGKKFATGYGLKSHVRTHTGEKPYRCQELNCLKSFKTSGD 306

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           L KH+  H G++P+KC +  CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 307 LQKHTRTHTGEKPFKCPFEGCGRSFTTSNIRKVHIRTHTGERPYYCAEPNCGRAFASATN 366

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK 230
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 367 YKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPCKPYNCNHCGKTYK 420

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Danio rerio (taxid: 7955)

>sp|P52747|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 5/159 (3%)

Query: 77  CTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYK 134
           C +  C   F T    + H R H  ++P+ C    C K+FKTSGDL KH   H G+RP+K
Sbjct: 269 CEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRTHTGERPFK 328

Query: 135 CNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVCGRSFISNTHKNNHLRIHYGLKPYV 192
           C +  CGR F T   R++H R H   +PY C    CGR+F S T+  NH+RIH G KPYV
Sbjct: 329 CPFEGCGRSFTTSNIRKVHVRTHTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYV 388

Query: 193 CHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYK 230
           C V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 389 CTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 427

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Homo sapiens (taxid: 9606)

>sp|A6QQW0|ZN143_BOVIN Zinc finger protein 143 OS=Bos taurus GN=ZNF143 PE=2 SV=1

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 103/174 (59%), Gaps = 5/174 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+FKTSGD
Sbjct: 229 LKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGD 288

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVCGRSFISNTH 177
           L KH   H G+RP+KC++  CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 289 LQKHIRTHTGERPFKCHFEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATN 348

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYK 230
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 349 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 402

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Bos taurus (taxid: 9913)

>sp|Q58DZ6|ZN143_XENTR Zinc finger protein 143 OS=Xenopus tropicalis GN=znf143 PE=2 SV=2

 Score =  147 bits (372), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 5/174 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+FKTSGD
Sbjct: 247 LKVHERSHTGDRPYQCDHGGCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGD 306

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTH 177
           L KH   H G+RP+KC +  CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 307 LQKHVRTHTGERPFKCPFEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPGCGRAFASATN 366

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYK 230
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 367 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 420

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus tropicalis (taxid: 8364)

>sp|Q91853|ZN143_XENLA Zinc finger protein 143 OS=Xenopus laevis GN=znf143 PE=1 SV=2

 Score =  147 bits (372), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 5/174 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+FKTSGD
Sbjct: 247 LKVHERSHTGDRPYQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGD 306

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTH 177
           L KH   H G+RP+KC +  CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 307 LQKHVRTHTGERPFKCPFEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPGCGRAFASATN 366

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYK 230
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 367 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 420

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus laevis (taxid: 8355)

>sp|Q5XIU2|ZN143_RAT Zinc finger protein 143 OS=Rattus norvegicus GN=Znf143 PE=2 SV=2

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 5/174 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+FKTSGD
Sbjct: 254 LKVHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGD 313

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVCGRSFISNTH 177
           L KH   H G+RP+KC    CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 314 LQKHIRTHTGERPFKCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATN 373

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYK 230
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 374 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 427

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Rattus norvegicus (taxid: 10116)

>sp|O70230|ZN143_MOUSE Zinc finger protein 143 OS=Mus musculus GN=Znf143 PE=1 SV=2

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 5/174 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+FKTSGD
Sbjct: 254 LKVHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGD 313

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVCGRSFISNTH 177
           L KH   H G+RP+KC    CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 314 LQKHIRTHTGERPFKCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATN 373

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYK 230
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 374 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 427

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	236
260826436	530	hypothetical protein BRAFLDRAFT_125869 [	0.796	0.354	0.409	5e-35
405954239	649	hypothetical protein CGI_10003391 [Crass	0.707	0.257	0.432	6e-35
348535946	627	PREDICTED: zinc finger protein 143-like	0.673	0.253	0.457	6e-35
156367412	265	predicted protein [Nematostella vectensi	0.741	0.660	0.438	1e-34
74095971	626	selenocysteine tRNA activating factor [T	0.673	0.253	0.457	1e-34
47220583	693	unnamed protein product [Tetraodon nigro	0.720	0.245	0.434	2e-34
335294214	613	PREDICTED: zinc finger protein 143 [Sus	0.754	0.290	0.420	2e-34
432109727	570	Zinc finger protein 76 [Myotis davidii]	0.737	0.305	0.407	2e-34
195995825	253	hypothetical protein TRIADDRAFT_13838 [T	0.737	0.687	0.430	2e-34
73972636	570	PREDICTED: zinc finger protein 76 isofor	0.737	0.305	0.407	2e-34

>gi|260826436|ref|XP_002608171.1| hypothetical protein BRAFLDRAFT_125869 [Branchiostoma floridae] gi|229293522|gb|EEN64181.1| hypothetical protein BRAFLDRAFT_125869 [Branchiostoma floridae]

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 110/193 (56%), Gaps = 5/193 (2%)

Query: 48  AEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC 107
           A HL+L  E      Q  E+    ++ + C ++ C+  F T    + H R H  ++P+ C
Sbjct: 64  AHHLKLIPEFAGFPPQVHERAHTGDRPYKCEHQGCDKAFATGYGLKSHTRTHTGEKPYKC 123

Query: 108 --RYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
               C KAFKTSGDL KH   H G+RP+KC +  C R F T   R++H R H   +PY C
Sbjct: 124 PEETCTKAFKTSGDLQKHVRTHTGERPFKCPFEGCDRSFTTSNIRKVHIRTHTGERPYIC 183

Query: 166 HV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHC 222
           ++  CGRSF S T+  NH RIH G KPYVC V+GC ++F + SSL KH  +HT  + + C
Sbjct: 184 NIEGCGRSFASATNFKNHSRIHTGEKPYVCTVQGCGKRFTEYSSLYKHHVVHTHSKPYIC 243

Query: 223 NLCNKTYKHQQSI 235
           N C K Y+   ++
Sbjct: 244 NHCGKNYRQTSTL 256

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405954239|gb|EKC21736.1| hypothetical protein CGI_10003391 [Crassostrea gigas]

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 102/178 (57%), Gaps = 11/178 (6%)

Query: 57  IMKKSLQEDEKIFEKEKLHV------CTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--R 108
           ++   L  DEK    E+ H       C YE C   F T    + H R+H  ++P+ C   
Sbjct: 271 VIAAGLTTDEKTMVHERSHTGVRPFKCDYEGCGKAFATGYGLKSHTRVHTGEKPYKCPEE 330

Query: 109 YCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH-- 166
            CDK FKTSGDL KH   H G+RP+KC +  C R F T   R++H R H   +PY C+  
Sbjct: 331 GCDKGFKTSGDLQKHVRTHTGERPFKCPFEGCERSFTTSNIRKVHIRTHTGERPYICNEE 390

Query: 167 VCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCN 223
            CGR+F S T+  NH+RIH G KPYVC V+GC ++F + SSL KH  +HT  + +HCN
Sbjct: 391 GCGRAFASATNYKNHIRIHTGEKPYVCTVQGCGKRFTEYSSLYKHHVVHTHSKPYHCN 448

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|348535946|ref|XP_003455458.1| PREDICTED: zinc finger protein 143-like [Oreochromis niloticus]

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 103/164 (62%), Gaps = 5/164 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNG 129
           +K ++C Y +C   F T    + H+R H  ++P+ C+   C K+FKTSGDL KH+  H G
Sbjct: 262 DKPYICDYPNCGKKFATGYGLKSHSRTHTGEKPYRCQELNCCKSFKTSGDLQKHTRTHTG 321

Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYG 187
           ++P+KC    CGR F T   R++H R H   +PY C    CGRSF S T+  NH+RIH G
Sbjct: 322 EKPFKCPVEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPSCGRSFASATNYKNHMRIHTG 381

Query: 188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK 230
            KPYVC V GC+++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 382 EKPYVCTVPGCEKRFTEYSSLYKHHVVHTPCKPYNCNHCGKTYK 425

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156367412|ref|XP_001627411.1| predicted protein [Nematostella vectensis] gi|156214320|gb|EDO35311.1| predicted protein [Nematostella vectensis]

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 5/180 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    EK   C++E C+  F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct: 77  LKVHERAHTGEKPFKCSFEQCDKAFATGYGLKSHMRTHTGEKPYKCPKETCAKAFKTSGD 136

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTH 177
           L KH   H G+RP+KC Y  CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct: 137 LQKHIRTHTGERPFKCPYEGCGRSFTTSNIRKVHMRTHTGERPYICEHPGCGRAFASATN 196

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSIL 236
             NH RIH G +PYVC V GC ++F + SSL KH  +HT  + + CN CNKTY+   ++ 
Sbjct: 197 YKNHSRIHTGERPYVCQVIGCNKRFTEYSSLYKHHVVHTHTKPYTCNACNKTYRQTSTLA 256

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|74095971|ref|NP_001027837.1| selenocysteine tRNA activating factor [Takifugu rubripes] gi|37595488|gb|AAQ94618.1| selenocysteine tRNA activating factor [Takifugu rubripes]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 102/164 (62%), Gaps = 5/164 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNG 129
           +K +VC +  C   F T    + H+R H  ++P+ C+   C K+FKTSGDL KH+  H G
Sbjct: 262 DKPYVCDFPGCGKKFATGYGLKSHSRTHTGEKPYRCQELNCCKSFKTSGDLQKHTRTHTG 321

Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYG 187
           ++P+KC    CGR F T   R++H R H   +PY C    CGRSF S T+  NH+RIH G
Sbjct: 322 EKPFKCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPSCGRSFASATNYKNHMRIHTG 381

Query: 188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK 230
            KPYVC V GC+++F + SSL KH  +HT  + ++CN C KTYK
Sbjct: 382 EKPYVCTVPGCQKRFTEYSSLYKHHVVHTPCKPYNCNHCGKTYK 425

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47220583|emb|CAG05609.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 106/175 (60%), Gaps = 5/175 (2%)

Query: 66  EKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKH 123
           E+    +K +VC +  C   F T    + H+R H  ++P+ C+   C K+FKTSGDL KH
Sbjct: 297 ERSHTGDKPYVCDFPGCGKKFATGYGLKSHSRTHTGEKPYRCQELNCCKSFKTSGDLQKH 356

Query: 124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKNNH 181
           +  H G++P+KC    CGR F T   R++H R H   +PY C    CGRSF S T+  NH
Sbjct: 357 TRTHTGEKPFKCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPSCGRSFASATNYKNH 416

Query: 182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
           +RIH G KPYVC V GC+++F + SSL KH  +HT  + ++CN C KTYK   ++
Sbjct: 417 MRIHTGEKPYVCTVPGCQKRFTEYSSLYKHHVVHTPCKPYNCNHCGKTYKQISTL 471

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|335294214|ref|XP_003357165.1| PREDICTED: zinc finger protein 143 [Sus scrofa]

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 5/183 (2%)

Query: 53  LSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--C 110
           + E   +K +Q  E+    ++ + C +  C   F T    + H R H  ++P+ C    C
Sbjct: 220 IGENEQEKKMQVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNC 279

Query: 111 DKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVC 168
            K+FKTSGDL KH   H G+RP+KC++  CGR F T   R++H R H   +PY C    C
Sbjct: 280 TKSFKTSGDLQKHIRTHTGERPFKCHFEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGC 339

Query: 169 GRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNK 227
           GR+F S T+  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C K
Sbjct: 340 GRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGK 399

Query: 228 TYK 230
           TYK
Sbjct: 400 TYK 402

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432109727|gb|ELK33786.1| Zinc finger protein 76 [Myotis davidii]

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 5/179 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct: 182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C    CGR F S T+
Sbjct: 242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATN 301

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct: 302 YKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 360

Source: Myotis davidii

Species: Myotis davidii

Genus: Myotis

Family: Vespertilionidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195995825|ref|XP_002107781.1| hypothetical protein TRIADDRAFT_13838 [Trichoplax adhaerens] gi|190588557|gb|EDV28579.1| hypothetical protein TRIADDRAFT_13838, partial [Trichoplax adhaerens]

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 5/179 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD 119
           L+  E+    +K + CTY  C+  F T    + H R H  ++P+ C +  C+KAFKTSGD
Sbjct: 70  LKVHERSHTGDKPYKCTYNGCHKAFATGYGLKSHIRTHTGEKPYKCTFKSCEKAFKTSGD 129

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           LSKH  IH+G+RP+KC +  CGR F T   R++H R H   +PY C V  C R+F S T+
Sbjct: 130 LSKHMRIHSGERPFKCPFEGCGRSFTTSNIRKVHMRTHTGERPYICQVQGCNRAFASATN 189

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYKHQQSI 235
             NH+RIH G +PY C   GC ++F + SSL KH  +HT  + + C  CNKTY+   ++
Sbjct: 190 FKNHMRIHTGERPYCCTYPGCCKRFTEYSSLYKHHVVHTHSKPYTCKFCNKTYRQTSTL 248

Source: Trichoplax adhaerens

Species: Trichoplax adhaerens

Genus: Trichoplax

Phylum: Placozoa

Superkingdom: Eukaryota

>gi|73972636|ref|XP_538875.2| PREDICTED: zinc finger protein 76 isoform 2 [Canis lupus familiaris]

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 5/179 (2%)

Query: 62  LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
           L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct: 182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
           L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C    CGR F S T+
Sbjct: 242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATN 301

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct: 302 YKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 360

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	236
UNIPROTKB|I3LDQ7	644	ZNF143 "Uncharacterized protei	0.724	0.265	0.427	6.7e-39
UNIPROTKB|E2RAQ6	570	ZNF76 "Uncharacterized protein	0.733	0.303	0.411	7e-38
UNIPROTKB|F1RZ10	546	ZNF76 "Uncharacterized protein	0.733	0.316	0.411	7e-38
RGD|1306239	568	Zfp523 "zinc finger protein 52	0.733	0.304	0.411	7e-38
UNIPROTKB|A6QQW0	613	ZNF143 "Zinc finger protein 14	0.716	0.275	0.431	7.6e-38
UNIPROTKB|P36508	570	ZNF76 "Zinc finger protein 76"	0.733	0.303	0.411	8.9e-38
UNIPROTKB|Q5R3B9	544	ZNF76 "Zinc finger protein 76"	0.733	0.318	0.411	8.9e-38
MGI|MGI:2687278	568	Zfp523 "zinc finger protein 52	0.733	0.304	0.411	8.9e-38
UNIPROTKB|F1LNL6	568	Zfp523 "Zinc finger protein 76	0.733	0.304	0.411	8.9e-38
UNIPROTKB|E1BND9	571	ZNF76 "Uncharacterized protein	0.733	0.302	0.411	8.9e-38

UNIPROTKB|I3LDQ7 ZNF143 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 419 (152.6 bits), Expect = 6.7e-39, P = 6.7e-39
 Identities = 77/180 (42%), Positives = 108/180 (60%)

Query:    60 KSLQEDEKIFEK----EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKA 113
             K+++ D K+ E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+
Sbjct:   254 KTIRHDSKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKS 313

Query:   114 FKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRS 171
             FKTSGDL KH   H G+RP+KC++  CGR F T   R++H R H   +PY C    CGR+
Sbjct:   314 FKTSGDLQKHIRTHTGERPFKCHFEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRA 373

Query:   172 FISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK 230
             F S T+  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct:   374 FASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 433

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E2RAQ6 ZNF76 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 300

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   301 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 360

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RZ10 ZNF76 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   158 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 217

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   218 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 276

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   277 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 336

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1306239 Zfp523 "zinc finger protein 523" [Rattus norvegicus (taxid:10116)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   182 LKVHERAHTGDRSYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 300

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   301 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTL 360

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A6QQW0 ZNF143 "Zinc finger protein 143" [Bos taurus (taxid:9913)]

 Score = 408 (148.7 bits), Expect = 7.6e-38, P = 7.6e-38
 Identities = 75/174 (43%), Positives = 103/174 (59%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C K+FKTSGD
Sbjct:   229 LKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGD 288

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTH 177
             L KH   H G+RP+KC++  CGR F T   R++H R H   +PY C    CGR+F S T+
Sbjct:   289 LQKHIRTHTGERPFKCHFEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATN 348

Query:   178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK 230
               NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + ++CN C KTYK
Sbjct:   349 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 402

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P36508 ZNF76 "Zinc finger protein 76" [Homo sapiens (taxid:9606)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   242 LQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 300

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   301 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 360

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0006359 "regulation of transcription from RNA polymerase III promoter" evidence=TAS

UNIPROTKB|Q5R3B9 ZNF76 "Zinc finger protein 76" [Homo sapiens (taxid:9606)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   156 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 215

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   216 LQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 274

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   275 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 334

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:2687278 Zfp523 "zinc finger protein 523" [Mus musculus (taxid:10090)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 300

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   301 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTL 360

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1LNL6 Zfp523 "Zinc finger protein 76" [Rattus norvegicus (taxid:10116)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   182 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGD 241

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   242 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 300

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   301 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTL 360

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BND9 ZNF76 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 74/180 (41%), Positives = 104/180 (57%)

Query:    62 LQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGD 119
             L+  E+    ++ + C +  C   F T    + H R H  ++P+ C    C KAFKTSGD
Sbjct:   183 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHMRTHTGEKPYKCPEELCSKAFKTSGD 242

Query:   120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC---HVCGRSFISNT 176
             L KH   H G+RP++C +  CGR F T   R++H R H   +PY+C   H CGR F S T
Sbjct:   243 LQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPH-CGRGFTSAT 301

Query:   177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI 235
             +  NH+RIH G KPYVC V GC ++F + SSL KH  +HT  + + C+ C KTY+   ++
Sbjct:   302 NYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTL 361

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	236
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.001

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 20/58 (34%), Positives = 25/58 (43%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           +P SC  C  SF    H   H+R H G KP  C   GC + F     L +H + H   
Sbjct: 32  RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNN 89

Length = 467

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	236
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.96
KOG3623|consensus	1007		99.9
KOG3608|consensus	467		99.87
KOG3608|consensus	467		99.85
KOG1074|consensus	958		99.84
KOG1074|consensus	958		99.82
KOG3623|consensus	1007		99.81
KOG3576|consensus	267		99.66
KOG3576|consensus	267		99.59
PLN03086	567	PRLI-interacting factor K; Provisional	99.31
PLN03086	567	PRLI-interacting factor K; Provisional	99.23
PHA00733	128	hypothetical protein	99.17
PHA02768	55	hypothetical protein; Provisional	99.16
PHA00733	128	hypothetical protein	99.07
PHA02768	55	hypothetical protein; Provisional	98.96
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.86
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.69
KOG3993|consensus	500		98.67
KOG3993|consensus	500		98.53
PHA00616	44	hypothetical protein	98.51
PHA00732	79	hypothetical protein	98.28
PHA00616	44	hypothetical protein	98.24
PHA00732	79	hypothetical protein	98.2
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.02
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.98
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.97
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.87
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.73
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.72
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.67
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.66
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.65
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.62
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.5
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.47
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.29
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.11
KOG4173|consensus	253		96.99
smart00355	26	ZnF_C2H2 zinc finger.	96.95
PRK04860	160	hypothetical protein; Provisional	96.77
smart00355	26	ZnF_C2H2 zinc finger.	96.68
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.58
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.57
COG5048	467	FOG: Zn-finger [General function prediction only]	96.55
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.32
PRK04860	160	hypothetical protein; Provisional	96.24
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.97
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.84
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.06
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.96
COG5048	467	FOG: Zn-finger [General function prediction only]	94.92
KOG2231|consensus	669		94.34
KOG2231|consensus	669		94.19
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.1
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.1
KOG1146|consensus	1406		93.32
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.31
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.8
KOG2893|consensus	341		91.41
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.26
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	90.71
KOG2785|consensus	390		90.66
KOG1146|consensus	1406		89.11
COG4049	65	Uncharacterized protein containing archaeal-type C	88.45
PF05290	140	Baculo_IE-1: Baculovirus immediate-early protein (	87.33
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	87.26
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	85.83
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	85.24
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	84.86
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.56
KOG2186|consensus	276		84.27
COG4049	65	Uncharacterized protein containing archaeal-type C	83.38
KOG2893|consensus	341		83.06
KOG2482|consensus	423		82.96
KOG2785|consensus	390		82.69
KOG4173|consensus	253		82.13
KOG2482|consensus	423		81.39
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.22
KOG2186|consensus	276		80.52
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	80.16

>KOG2462|consensus

Probab=99.97  E-value=6.2e-32  Score=198.72  Aligned_cols=123  Identities=30%  Similarity=0.751  Sum_probs=62.5

Q ss_pred             cccccCccccCCchhHHhhhhhhcC---CCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhH
Q psy9360         105 FGCRYCDKAFKTSGDLSKHSAIHNG---DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNH  181 (236)
Q Consensus       105 ~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  181 (236)
                      |.|..|++.+.+.++|.+|..+|..   .+.+.|+  .|++.|.+..+|..|+++|.  .+++|.+||+.|.....|..|
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~--~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCK--YCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCC--CCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            4455555555555555555444432   3344454  35555555555555555554  335555555555555555555


Q ss_pred             HHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCccccccCccC
Q psy9360         182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQ  233 (236)
Q Consensus       182 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~  233 (236)
                      +++|||||||.|+.  |++.|.++++|+.||++|.+ |+|+|..|+|.|...+
T Consensus       207 iRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~S  257 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKS  257 (279)
T ss_pred             cccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHH
Confidence            55555555555532  55555555555555555555 5555555555554443

>KOG2462|consensus

Probab=99.96  E-value=1.4e-29  Score=186.34  Aligned_cols=137  Identities=29%  Similarity=0.627  Sum_probs=127.1

Q ss_pred             cCCceeecCCCCCcccCChHHHHHHHhhcCC---CCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccch
Q psy9360          71 KEKLHVCTYEDCNSVFQTQAEWEEHARMHAV---QRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTH  147 (236)
Q Consensus        71 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  147 (236)
                      ....|.|  ..|++.+.+.++|.+|.++|-.   .+.+.|..|++.|.+...|..|+++|.  .+.+|.  .||+.|...
T Consensus       127 ~~~r~~c--~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~--iCGKaFSRP  200 (279)
T KOG2462|consen  127 KHPRYKC--PECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECG--ICGKAFSRP  200 (279)
T ss_pred             cCCceec--cccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccc--cccccccch
Confidence            3446888  9999999999999999998853   677999999999999999999999996  678899  599999999


Q ss_pred             hhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhh
Q psy9360         148 TQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       148 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      +.|+.|+++|+|+|||.|+.|++.|.+.++|+.|+.+|.+.|+|+|..  |+|.|...+.|.+|...-
T Consensus       201 WLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~--C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  201 WLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPR--CGKSFALKSYLNKHSESA  266 (279)
T ss_pred             HHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcc--hhhHHHHHHHHHHhhhhc
Confidence            999999999999999999999999999999999999999999999966  999999999999998753

>KOG3623|consensus

Probab=99.90  E-value=2.9e-24  Score=176.08  Aligned_cols=71  Identities=31%  Similarity=0.770  Sum_probs=68.0

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCccccccCccCC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQS  234 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~  234 (236)
                      .|.|..|.++|...++|.+|.-.|+|.+||+|.+  |.|.|..+-.|..|+|.|.| |||+|+.|+|+|+...+
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGS  965 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGS  965 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccc
Confidence            3999999999999999999999999999999977  99999999999999999999 99999999999998654

>KOG3608|consensus

Probab=99.87  E-value=9.1e-23  Score=154.68  Aligned_cols=212  Identities=21%  Similarity=0.382  Sum_probs=169.5

Q ss_pred             CCccccc--CCcCCCccCCCCCCCcccccch-h-------------hHH--hhhhhHHHHhhhhhhhhhhhccCCceeec
Q psy9360          17 GGDEVCW--ESTNSGWSNNGFNQNTRTASND-I-------------YAE--HLQLSEEIMKKSLQEDEKIFEKEKLHVCT   78 (236)
Q Consensus        17 ~~~~~C~--~c~~~~~~~~~~~~h~~~~~~~-~-------------~~~--~~~~~~~~~~~~~~~h~~~~~~~~~~~C~   78 (236)
                      ++-|.|.  .|+..|.+...+..|...+.-- .             ..|  ..|-..+..+..|.+|.+.|.+++...| 
T Consensus       132 g~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvAC-  210 (467)
T KOG3608|consen  132 GQNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVAC-  210 (467)
T ss_pred             hhhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEec-
Confidence            4455564  7888888877776666554321 0             111  1244557788888999999999999989 


Q ss_pred             CCCCCcccCChHHHHHHHhhc--CCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHh-
Q psy9360          79 YEDCNSVFQTQAEWEEHARMH--AVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHER-  155 (236)
Q Consensus        79 ~~~C~~~f~~~~~l~~H~~~h--~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-  155 (236)
                       +.||.-|.+...|..|++..  ....+|.|..|.+.|.++..|..|++.|  ...|.|++  |.......+.|..|++ 
T Consensus       211 -p~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH--vn~ykCpl--Cdmtc~~~ssL~~H~r~  285 (467)
T KOG3608|consen  211 -PHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH--VNCYKCPL--CDMTCSSASSLTTHIRY  285 (467)
T ss_pred             -chHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh--hhcccccc--cccCCCChHHHHHHHHh
Confidence             88999999999998887643  3466899999999999999999998888  45688994  9999999999999988 


Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhc-C---CcccCCccccccCc
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-Q---QTFHCNLCNKTYKH  231 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~---~~~~C~~C~~~f~~  231 (236)
                      .|...+|++|..|.+.|...+.|..|..+|. +-.|.|..+.|..+|.+..+|++|++.++ |   -+|.|..|++.|.+
T Consensus       286 rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  286 RHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             hhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence            4677899999999999999999999999887 67799977789999999999999998665 4   56999999999988


Q ss_pred             cCCC
Q psy9360         232 QQSI  235 (236)
Q Consensus       232 ~~~L  235 (236)
                      ..+|
T Consensus       365 G~~L  368 (467)
T KOG3608|consen  365 GKSL  368 (467)
T ss_pred             chhH
Confidence            7655

>KOG3608|consensus

Probab=99.85  E-value=3.3e-22  Score=151.66  Aligned_cols=190  Identities=23%  Similarity=0.370  Sum_probs=170.1

Q ss_pred             ccccc--CCcCCCccCCCCCCCcccccch-hhHHhhhhhHHHHhhhhhhhhhhhc--cCCceeecCCCCCcccCChHHHH
Q psy9360          19 DEVCW--ESTNSGWSNNGFNQNTRTASND-IYAEHLQLSEEIMKKSLQEDEKIFE--KEKLHVCTYEDCNSVFQTQAEWE   93 (236)
Q Consensus        19 ~~~C~--~c~~~~~~~~~~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~~~--~~~~~~C~~~~C~~~f~~~~~l~   93 (236)
                      -+.|.  .|.+.+.+...|..|.+.++++ ..+|..|+..|..+..+..|.+..+  ...+|.|  ..|.+.|.+...|.
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC--~~C~KrFaTeklL~  254 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQC--AQCFKRFATEKLLK  254 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHH--HHHHHHHhHHHHHH
Confidence            45554  7889999999999999999887 7889999999999999999977654  4578999  99999999999999


Q ss_pred             HHHhhcCCCCCcccccCccccCCchhHHhhhhh-hcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeeccc--ccc
Q psy9360          94 EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAI-HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGR  170 (236)
Q Consensus        94 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~  170 (236)
                      .|+..|.  ..|+|+.|+.+....+.|..|++. |...+||+|.  .|.+.+.....|.+|..+|. +-.|.|..  |..
T Consensus       255 ~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~  329 (467)
T KOG3608|consen  255 SHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHY  329 (467)
T ss_pred             HHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHHhcc-ccceecCCCCCcH
Confidence            9999886  459999999999999999999886 7789999999  79999999999999999998 56799999  999


Q ss_pred             cccCchHHHhHHHHhc-CC--CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         171 SFISNTHKNNHLRIHY-GL--KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       171 ~f~~~~~l~~H~~~h~-~~--~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +|.....+++|++.++ |.  -+|.|.+  |.+.|.+..+|.+|++..++
T Consensus       330 s~r~~~q~~~H~~evhEg~np~~Y~CH~--Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  330 SVRTYTQMRRHFLEVHEGNNPILYACHC--CDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCceeeec--chhhhccchhHHHHHHHhhc
Confidence            9999999999998776 44  4699998  99999999999999987654

>KOG1074|consensus

Probab=99.84  E-value=6.5e-22  Score=164.71  Aligned_cols=74  Identities=28%  Similarity=0.719  Sum_probs=67.1

Q ss_pred             CCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcCC-----cccCC---ccccccCcc
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ-----TFHCN---LCNKTYKHQ  232 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-----~~~C~---~C~~~f~~~  232 (236)
                      .|-.|.+|.++..=.++|+.|+++|+||+||+|.|  ||+.|..+.+|+.|+-+|..+     ++.|+   +|-+.|...
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhhhccccccc
Confidence            34789999999999999999999999999999988  999999999999999999753     48999   999999988


Q ss_pred             CCCC
Q psy9360         233 QSIL  236 (236)
Q Consensus       233 ~~L~  236 (236)
                      ..|+
T Consensus       682 V~lp  685 (958)
T KOG1074|consen  682 VTLP  685 (958)
T ss_pred             cccc
Confidence            7663

>KOG1074|consensus

Probab=99.82  E-value=5.3e-21  Score=159.37  Aligned_cols=179  Identities=26%  Similarity=0.482  Sum_probs=149.4

Q ss_pred             CCCCCCcccccchhhHHhhhhhHHHHhhhhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCCC----CCcccc
Q psy9360          33 NGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQ----RPFGCR  108 (236)
Q Consensus        33 ~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~  108 (236)
                      ..+.........+..+|.+|.....-+..|+.|.++|+++++|+|  ++||+.|.++.+|+.|+.+|...    .++.|+
T Consensus       592 ~slv~~~~~~~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkC--KiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP  669 (958)
T KOG1074|consen  592 TSLVENSENKRTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKC--KICGRAFTTKGNLKAHMSVHKAKPPARVQFSCP  669 (958)
T ss_pred             cccccccccccCCccceeeeeecccchhhhhhhhhcccCcCcccc--ccccchhccccchhhcccccccCccccccccCC
Confidence            345566666667788899999999999999999999999999999  99999999999999999888543    347899


Q ss_pred             ---cCccccCCchhHHhhhhhhcCC-CC------------cccccCcccccccchhhHHHhHhhcCC-------------
Q psy9360         109 ---YCDKAFKTSGDLSKHSAIHNGD-RP------------YKCNYTSCGRHFRTHTQRQIHERCHLD-------------  159 (236)
Q Consensus       109 ---~C~~~f~~~~~l~~H~~~h~~~-~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------  159 (236)
                         +|.+.|...-.|..|+++|.+. .+            -.|.  .|.+.|.....+..++..|.+             
T Consensus       670 ~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~--~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t  747 (958)
T KOG1074|consen  670 STFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCS--SCQKTFSDARSFSQQISEQPSPESEPDEQMDERT  747 (958)
T ss_pred             chhhhcccccccccccceEEeecCCCCCCCcccccccchhcccc--hhhhcccccccchhhhhccCCcccCCcccccccc
Confidence               9999999999999999998732 11            3466  477777666666666665522             


Q ss_pred             --------------------------------------------------------------------------------
Q psy9360         160 --------------------------------------------------------------------------------  159 (236)
Q Consensus       160 --------------------------------------------------------------------------------  159 (236)
                                                                                                      
T Consensus       748 ~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~p  827 (958)
T KOG1074|consen  748 ETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDP  827 (958)
T ss_pred             cccccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCc
Confidence                                                                                            


Q ss_pred             -------------------------------------------------CCCeecccccccccCchHHHhHHHHhcCCCC
Q psy9360         160 -------------------------------------------------SKPYSCHVCGRSFISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       160 -------------------------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  190 (236)
                                                                       .....|.+||+.|.+.++|..|+++|+++||
T Consensus       828 vl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KP  907 (958)
T KOG1074|consen  828 VLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKP  907 (958)
T ss_pred             hhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCC
Confidence                                                             0116799999999999999999999999999


Q ss_pred             eeccccccccccCChhhHHHHHHhhcC
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |.|.+  |++.|..+.+|+.||.+|..
T Consensus       908 F~C~f--C~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  908 FFCHF--CEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             ccchh--hhhhhhhhhhhhhhhccccc
Confidence            99998  99999999999999999986

>KOG3623|consensus

Probab=99.81  E-value=2e-21  Score=159.63  Aligned_cols=79  Identities=29%  Similarity=0.742  Sum_probs=75.6

Q ss_pred             cccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHH
Q psy9360         133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHT  212 (236)
Q Consensus       133 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~  212 (236)
                      |.|.  .|.+.|...+.|.+|.--|+|.+||.|.+|.+.|..+..|..|.+.|.|||||.|.  .|+|+|..+.++.+||
T Consensus       895 yaCD--qCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCd--KClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  895 YACD--QCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCD--KCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             chHH--HHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhh--hhhhhcccccchHhhh
Confidence            8899  79999999999999999999999999999999999999999999999999999995  5999999999999999


Q ss_pred             Hhh
Q psy9360         213 KIH  215 (236)
Q Consensus       213 ~~h  215 (236)
                      ...
T Consensus       971 NHR  973 (1007)
T KOG3623|consen  971 NHR  973 (1007)
T ss_pred             ccc
Confidence            854

>KOG3576|consensus

Probab=99.66  E-value=3.3e-17  Score=115.62  Aligned_cols=110  Identities=30%  Similarity=0.620  Sum_probs=62.0

Q ss_pred             CcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHH
Q psy9360         104 PFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       104 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      .|.|.+|++.|...--|.+|+.-|...+.+.|.+  ||+.|.+--.|.+|.++|+|-+||+|..|+++|++.-+|..|.+
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            3555555555555555555555555555555553  55555555555555555555555555555555555555555554


Q ss_pred             HhcC-----------CCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         184 IHYG-----------LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       184 ~h~~-----------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      .-++           .+.|.|  ++||..-.....+..|++.|+.
T Consensus       195 kvhgv~~~yaykerr~kl~vc--edcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVC--EDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHcCchHHHHHHHhhhheeee--cccCCCCCChhHHHHHHHhcCC
Confidence            3322           244666  4566666666666666665543

>KOG3576|consensus

Probab=99.59  E-value=6e-16  Score=109.32  Aligned_cols=116  Identities=27%  Similarity=0.536  Sum_probs=103.6

Q ss_pred             ccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhh
Q psy9360          70 EKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQ  149 (236)
Q Consensus        70 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  149 (236)
                      .....|.|  ..|++.|.-...|.+|++-|..-+.+-|..|++.|...-.|++|.++|+|.+||.|.  .|++.|.....
T Consensus       113 sd~d~ftC--rvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~--~c~kaftqrcs  188 (267)
T KOG3576|consen  113 SDQDSFTC--RVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCS--LCEKAFTQRCS  188 (267)
T ss_pred             CCCCeeee--ehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchh--hhhHHHHhhcc
Confidence            34567999  999999999999999999998888899999999999999999999999999999999  69999999999


Q ss_pred             HHHhHhhcCC-----------CCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         150 RQIHERCHLD-----------SKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       150 l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      |-.|++.-+|           .+-|.|+.||..-.....+..|++.|+..-
T Consensus       189 leshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  189 LESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            9999774333           456999999999999999999999887543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.31  E-value=6.6e-12  Score=104.21  Aligned_cols=136  Identities=18%  Similarity=0.465  Sum_probs=104.9

Q ss_pred             ceeecCCCCCcccCChHHHHHHHhhcCCCCCccccc--CccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHH
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQ  151 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~  151 (236)
                      .-.|  ..|..... ...|..|...- ....-.|+.  |+..|. ...+..|         +.|+  .|++.|. ...|.
T Consensus       407 ~V~C--~NC~~~i~-l~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~--~Cgk~f~-~s~Le  469 (567)
T PLN03086        407 TVEC--RNCKHYIP-SRSIALHEAYC-SRHNVVCPHDGCGIVLR-VEEAKNH---------VHCE--KCGQAFQ-QGEME  469 (567)
T ss_pred             eEEC--CCCCCccc-hhHHHHHHhhC-CCcceeCCcccccceee-ccccccC---------ccCC--CCCCccc-hHHHH
Confidence            3467  77887644 46666786433 234456874  999884 3334444         4798  6999995 67899


Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCC----------hhhHHHHHHhhcCCccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVD----------LSSLKKHTKIHTQQTFH  221 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~----------~~~l~~H~~~h~~~~~~  221 (236)
                      .|..+++  +++.|+ ||..+ ....|..|+.+|..++++.|.+  |++.|..          .+.|..|..+...+++.
T Consensus       470 kH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~  543 (567)
T PLN03086        470 KHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAP  543 (567)
T ss_pred             HHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhcCCcceE
Confidence            9999986  789999 99766 5589999999999999999987  9999952          35799999997669999


Q ss_pred             CCccccccCcc
Q psy9360         222 CNLCNKTYKHQ  232 (236)
Q Consensus       222 C~~C~~~f~~~  232 (236)
                      |..||+.|+.+
T Consensus       544 C~~Cgk~Vrlr  554 (567)
T PLN03086        544 CDSCGRSVMLK  554 (567)
T ss_pred             ccccCCeeeeh
Confidence            99999998764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.23  E-value=2e-11  Score=101.43  Aligned_cols=147  Identities=20%  Similarity=0.384  Sum_probs=103.6

Q ss_pred             hHHhhhhhHHHHhhhhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhh
Q psy9360          47 YAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAI  126 (236)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  126 (236)
                      ..|..|..... ...+..|.....- ..-.|+...|+..|. ...+.         +.+.|+.|++.|. ...|..|...
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C~r-~~V~Cp~~~Cg~v~~-r~el~---------~H~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYCSR-HNVVCPHDGCGIVLR-VEEAK---------NHVHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhCCC-cceeCCcccccceee-ccccc---------cCccCCCCCCccc-hHHHHHHHHh
Confidence            34555554433 3334456544332 234573225888772 22222         3358999999996 6779999998


Q ss_pred             hcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccC----------chHHHhHHHHhcCCCCeecccc
Q psy9360         127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFIS----------NTHKNNHLRIHYGLKPYVCHVE  196 (236)
Q Consensus       127 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~~  196 (236)
                      ++  +++.|+   |+..+ ....|..|+..|...+++.|..|+..|..          .+.|..|..+. +.+++.|.. 
T Consensus       475 ~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~-  546 (567)
T PLN03086        475 FH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDS-  546 (567)
T ss_pred             cC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccc-
Confidence            75  788997   98654 66899999999999999999999998852          35788998885 889999965 


Q ss_pred             ccccccCChhhHHHHHHhhc
Q psy9360         197 GCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       197 ~C~~~f~~~~~l~~H~~~h~  216 (236)
                       |++.|..+ .|..|+..-|
T Consensus       547 -Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        547 -CGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             -cCCeeeeh-hHHHHHHHhh
Confidence             99888765 4777887544

>PHA00733 hypothetical protein

Probab=99.17  E-value=2.7e-11  Score=82.53  Aligned_cols=82  Identities=18%  Similarity=0.268  Sum_probs=52.5

Q ss_pred             CCCcccccCcccccccchhhHHHh--H---hhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCC
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIH--E---RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVD  204 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H--~---~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  204 (236)
                      .+++.|.  .|.+.|.....|..+  +   ..+.+.+||.|+.||+.|.+...|..|++.|  +.+|.|.+  |++.|..
T Consensus        38 ~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~~  111 (128)
T PHA00733         38 QKRLIRA--VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFRN  111 (128)
T ss_pred             hhhHHHH--HHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccCC
Confidence            4445555  355555444443333  1   1223466788888888888888888887765  34678855  8888888


Q ss_pred             hhhHHHHHHhhcC
Q psy9360         205 LSSLKKHTKIHTQ  217 (236)
Q Consensus       205 ~~~l~~H~~~h~~  217 (236)
                      ...|.+|+...++
T Consensus       112 ~~sL~~H~~~~h~  124 (128)
T PHA00733        112 TDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHHhcC
Confidence            8888888876654

>PHA02768 hypothetical protein; Provisional

Probab=99.16  E-value=2e-11  Score=68.69  Aligned_cols=43  Identities=16%  Similarity=0.442  Sum_probs=32.7

Q ss_pred             CeeccccccccccCChhhHHHHHHhhcCCcccCCccccccCccCCC
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSI  235 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L  235 (236)
                      .|+|+.  ||+.|...++|..|+++|. ++|+|..|++.|.+.+.|
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            367754  8888888888888888877 677888888888777665

>PHA00733 hypothetical protein

Probab=99.07  E-value=1.7e-10  Score=78.59  Aligned_cols=95  Identities=17%  Similarity=0.255  Sum_probs=69.3

Q ss_pred             hHHHHHHHhhcCCCCCcccccCccccCCchhHHhh--h---hhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCe
Q psy9360          89 QAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKH--S---AIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPY  163 (236)
Q Consensus        89 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H--~---~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~  163 (236)
                      ...|.++-..-..++++.|.+|...|.....|..+  +   ..++++.+|.|+  .|++.|.....|..|++.+  ..++
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~--~Cgk~Fss~s~L~~H~r~h--~~~~  100 (128)
T PHA00733         25 LEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCP--LCLMPFSSSVSLKQHIRYT--EHSK  100 (128)
T ss_pred             HHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCC--CCCCcCCCHHHHHHHHhcC--CcCc
Confidence            34444433333346678888888777776665555  1   233457889998  6999999999999998876  3468


Q ss_pred             ecccccccccCchHHHhHHHHhcC
Q psy9360         164 SCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       164 ~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      .|.+|++.|.....|..|+...++
T Consensus       101 ~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        101 VCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCCCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999999887664

>PHA02768 hypothetical protein; Provisional

Probab=98.96  E-value=3.3e-10  Score=63.78  Aligned_cols=44  Identities=27%  Similarity=0.503  Sum_probs=36.7

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLK  209 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~  209 (236)
                      .|+|+.||+.|...++|..|+++|+  ++++|..  |++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCc--ccceecccceeE
Confidence            3789999999999999999999987  6888854  999988877664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.86  E-value=1.4e-09  Score=52.39  Aligned_cols=24  Identities=42%  Similarity=0.898  Sum_probs=12.1

Q ss_pred             HHhHHHHhcCCCCeeccccccccccC
Q psy9360         178 KNNHLRIHYGLKPYVCHVEGCKRKFV  203 (236)
Q Consensus       178 l~~H~~~h~~~~~~~C~~~~C~~~f~  203 (236)
                      |..|+++|++++||.|+.  |++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             HHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            445555555555555533  555543

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.69  E-value=1.9e-08  Score=48.44  Aligned_cols=25  Identities=28%  Similarity=0.882  Sum_probs=17.9

Q ss_pred             hHHHHHHhhcC-CcccCCccccccCc
Q psy9360         207 SLKKHTKIHTQ-QTFHCNLCNKTYKH  231 (236)
Q Consensus       207 ~l~~H~~~h~~-~~~~C~~C~~~f~~  231 (236)
                      +|.+|+++|.+ +||+|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            46777777777 77777777777753

...

>KOG3993|consensus

Probab=98.67  E-value=3e-09  Score=83.69  Aligned_cols=51  Identities=16%  Similarity=0.202  Sum_probs=33.8

Q ss_pred             ecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         164 SCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       164 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .++.+|..+.++..--.+.+.-..+..|.|.+  |.-.|.++..|.+|+..-|
T Consensus       432 ~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky--~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  432 LPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKY--CPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             CCCCCCCCcccCCCCCccccccchhhcccccc--chHhhhcCcchHhHhhhcC
Confidence            35556655555544444444444556688876  9999999999999887543

>KOG3993|consensus

Probab=98.53  E-value=4.8e-08  Score=77.10  Aligned_cols=135  Identities=20%  Similarity=0.260  Sum_probs=94.8

Q ss_pred             hhHHhhhhhHHHHhhhhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCC------------------------
Q psy9360          46 IYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAV------------------------  101 (236)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------------------  101 (236)
                      .+.|..|...+.+...|..|.-..-....|+|  ++|+++|+-..+|..|.+.|..                        
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrC--PEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRC--PECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecC--CcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            57899999999999999998766666667999  9999999999999999887731                        


Q ss_pred             ---------CCCcccccCccccCCchhHHhhhhhhcCCCC----------------------------------------
Q psy9360         102 ---------QRPFGCRYCDKAFKTSGDLSKHSAIHNGDRP----------------------------------------  132 (236)
Q Consensus       102 ---------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------------------  132 (236)
                               +..|.|..|++.|....-|+.|+..|+....                                        
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~  424 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYV  424 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeee
Confidence                     1237888888888888888888777643100                                        


Q ss_pred             ------cccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHH
Q psy9360         133 ------YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       133 ------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                            ..++  -++..+.+...--.+.+.-.-+..|.|..|.-.|.+...|.+|+..
T Consensus       425 a~sael~~pp--~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  425 AGSAELELPP--YDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             eccccccCCC--CCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence                  1122  1333333332222222222224458899999999999999998864

>PHA00616 hypothetical protein

Probab=98.51  E-value=5e-08  Score=52.25  Aligned_cols=33  Identities=21%  Similarity=0.295  Sum_probs=22.4

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      ||.|+.||+.|...+.|..|++.|++++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            466777777777777777777777766666654

>PHA00732 hypothetical protein

Probab=98.28  E-value=5.6e-07  Score=55.71  Aligned_cols=21  Identities=24%  Similarity=0.642  Sum_probs=9.9

Q ss_pred             eecccccccccCchHHHhHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |.|+.||+.|.+...|..|++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r   22 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHAR   22 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhh
Confidence            444444444444444444444

>PHA00616 hypothetical protein

Probab=98.24  E-value=5e-07  Score=48.46  Aligned_cols=33  Identities=15%  Similarity=0.267  Sum_probs=29.8

Q ss_pred             CeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      ||+|+  .||+.|...+.|.+|++.|++ +++.|+.
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            68995  599999999999999999999 8988865

>PHA00732 hypothetical protein

Probab=98.20  E-value=1e-06  Score=54.51  Aligned_cols=39  Identities=36%  Similarity=0.755  Sum_probs=33.5

Q ss_pred             CeeccccccccccCChhhHHHHHHh-hcCCcccCCccccccCcc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKI-HTQQTFHCNLCNKTYKHQ  232 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~C~~C~~~f~~~  232 (236)
                      ||.|..  |++.|.+..+|..|++. |.  ++.|+.||+.|.+.
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~~l   40 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHT--LTKCPVCNKSYRRL   40 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccC--CCccCCCCCEeCCh
Confidence            688965  99999999999999985 54  46899999999853

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.02  E-value=1e-05  Score=46.48  Aligned_cols=49  Identities=22%  Similarity=0.528  Sum_probs=30.2

Q ss_pred             eecccccccccCchHHHhHHHHhcC-C-CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHYG-L-KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~~-~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |.|+.|++. .+...|..|....+. + +.+.|++  |...+.  .+|.+|+..++
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            677777774 345667777654332 2 4577766  776544  37777777655

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.98  E-value=3.9e-06  Score=64.17  Aligned_cols=49  Identities=35%  Similarity=0.808  Sum_probs=42.3

Q ss_pred             CCCCeeccccccccccCChhhHHHHHHhhc-------------------C-CcccCCccccccCccCCC
Q psy9360         187 GLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-------------------Q-QTFHCNLCNKTYKHQQSI  235 (236)
Q Consensus       187 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------------~-~~~~C~~C~~~f~~~~~L  235 (236)
                      ++|||+|+|+.|.|.+.....|+-|+..-+                   + |||.|+.|+|.|..-.+|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccc
Confidence            358999999999999999999999987532                   2 789999999999988877

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.97  E-value=5.5e-06  Score=38.53  Aligned_cols=22  Identities=36%  Similarity=0.847  Sum_probs=12.7

Q ss_pred             eeccccccccccCChhhHHHHHHh
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      |+|+.  |++.|.....|.+|++.
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhH
Confidence            45543  66666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.87  E-value=1.3e-05  Score=37.29  Aligned_cols=23  Identities=43%  Similarity=1.034  Sum_probs=21.5

Q ss_pred             eecccccccccCchHHHhHHHHh
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.73  E-value=1.1e-05  Score=61.77  Aligned_cols=72  Identities=26%  Similarity=0.553  Sum_probs=42.1

Q ss_pred             CCCcccccCcccccccchhhHHHhHhh-cCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhH
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERC-HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSL  208 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l  208 (236)
                      ++||+|++..|.+.|.+...|..|+.- |...+-..=+          .-..|......+|||+|.|  |+|++.....|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCev--C~KRYKNlNGL  414 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEV--CDKRYKNLNGL  414 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccc--cchhhccCccc
Confidence            477777777777777777777777652 2221111111          0011111133467888866  88888888887


Q ss_pred             HHHHH
Q psy9360         209 KKHTK  213 (236)
Q Consensus       209 ~~H~~  213 (236)
                      +-|..
T Consensus       415 KYHr~  419 (423)
T COG5189         415 KYHRK  419 (423)
T ss_pred             eeccc
Confidence            77654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.72  E-value=7.8e-05  Score=42.77  Aligned_cols=50  Identities=24%  Similarity=0.462  Sum_probs=30.9

Q ss_pred             CcccccCcccccccchhhHHHhHhh-cCC-CCCeecccccccccCchHHHhHHHHhc
Q psy9360         132 PYKCNYTSCGRHFRTHTQRQIHERC-HLD-SKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       132 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      .|.|++  |++ ..+...|..|... |.. .+.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            366774  777 4556677777553 333 24577777776544  36777776654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.67  E-value=3.9e-05  Score=35.81  Aligned_cols=23  Identities=30%  Similarity=0.837  Sum_probs=11.7

Q ss_pred             eeccccccccccCChhhHHHHHHhh
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      |.|++  |++.|.+...|+.|+++|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            44544  666666666666665554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.66  E-value=3.5e-05  Score=37.31  Aligned_cols=25  Identities=36%  Similarity=0.909  Sum_probs=17.1

Q ss_pred             CeeccccccccccCChhhHHHHHHhhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      ||+|.+  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            466754  7777777777777776664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.65  E-value=2.5e-05  Score=37.83  Aligned_cols=25  Identities=36%  Similarity=0.822  Sum_probs=20.6

Q ss_pred             CeecccccccccCchHHHhHHHHhc
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5788888888888888888887764

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.62  E-value=5.6e-05  Score=35.28  Aligned_cols=24  Identities=38%  Similarity=0.928  Sum_probs=20.3

Q ss_pred             eecccccccccCchHHHhHHHHhc
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      |.|+.|+..|.+...|..|+.+|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999874

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.50  E-value=7.2e-05  Score=48.85  Aligned_cols=22  Identities=27%  Similarity=0.723  Sum_probs=11.0

Q ss_pred             eecccccccccCchHHHhHHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                      +.|..|++.|.+...|..|++.
T Consensus        51 ~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   51 FRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             EEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCccCCCCcCHHHHHHHHcC
Confidence            5555555555555555555543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.47  E-value=8.9e-05  Score=48.43  Aligned_cols=72  Identities=17%  Similarity=0.297  Sum_probs=21.6

Q ss_pred             cccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHh
Q psy9360         135 CNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       135 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      |.  -|+..|.+...|..|+...++-..-    ....+.....+..+.+.-. ...+.|.+  |++.|.+...|..|++.
T Consensus         2 C~--~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~--C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    2 CL--FCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPY--CNKTFRSREALQEHMRS   72 (100)
T ss_dssp             ------------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHHH
T ss_pred             cc--ccccccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCc--cCCCCcCHHHHHHHHcC
Confidence            66  4999999999999998765542211    1112223344444443321 23699987  99999999999999996


Q ss_pred             h
Q psy9360         215 H  215 (236)
Q Consensus       215 h  215 (236)
                      +
T Consensus        73 ~   73 (100)
T PF12756_consen   73 K   73 (100)
T ss_dssp             T
T ss_pred             c
Confidence            5

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.29  E-value=0.0003  Score=38.64  Aligned_cols=29  Identities=28%  Similarity=0.533  Sum_probs=12.4

Q ss_pred             CCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      .|-.|++|+..+.+..+|++|+.+.++.+
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            34455555555555555555555444444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.11  E-value=0.00056  Score=37.60  Aligned_cols=32  Identities=19%  Similarity=0.433  Sum_probs=22.8

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHhhcC-Cc
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QT  219 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~  219 (236)
                      ..+.|-+|++  |+..+.+..+|++|+.++|+ ||
T Consensus        20 ~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            3568999977  99999999999999998877 65

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG4173|consensus

Probab=96.99  E-value=0.00052  Score=49.50  Aligned_cols=84  Identities=26%  Similarity=0.471  Sum_probs=68.3

Q ss_pred             CCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHH-h---------cCCCCeeccccccc
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRI-H---------YGLKPYVCHVEGCK  199 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C~~~~C~  199 (236)
                      ...+.|++..|...|.....+-.|..+.++   -.|.+|.+.|++...|..|+.. |         .|.-.|+|-+++|+
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            345788877898999888888888776665   3899999999999999999752 2         34456999999999


Q ss_pred             cccCChhhHHHHHHhhc
Q psy9360         200 RKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       200 ~~f~~~~~l~~H~~~h~  216 (236)
                      ..|.....-..|+..-|
T Consensus       154 ~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhHHHHhc
Confidence            99999999999997544

>smart00355 ZnF_C2H2 zinc finger

Probab=96.95  E-value=0.00077  Score=31.80  Aligned_cols=18  Identities=39%  Similarity=0.746  Sum_probs=8.9

Q ss_pred             cccccCChhhHHHHHHhh
Q psy9360         198 CKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       198 C~~~f~~~~~l~~H~~~h  215 (236)
                      |++.|.....|..|++.|
T Consensus         6 C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        6 CGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CcchhCCHHHHHHHHHHh
Confidence            555555555555554433

>PRK04860 hypothetical protein; Provisional

Probab=96.77  E-value=0.001  Score=47.16  Aligned_cols=37  Identities=22%  Similarity=0.755  Sum_probs=21.4

Q ss_pred             CeeccccccccccCChhhHHHHHHhhcC-CcccCCccccccCcc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQ  232 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~  232 (236)
                      +|.|.   |+.   ....+++|.++|.+ ++|.|..|+..|...
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            46662   554   45555666666665 556666666665544

>smart00355 ZnF_C2H2 zinc finger

Probab=96.68  E-value=0.0015  Score=30.74  Aligned_cols=24  Identities=38%  Similarity=0.876  Sum_probs=21.6

Q ss_pred             eecccccccccCchHHHhHHHHhc
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.58  E-value=0.0013  Score=31.01  Aligned_cols=22  Identities=27%  Similarity=0.828  Sum_probs=11.8

Q ss_pred             eeccccccccccCChhhHHHHHHh
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      |.|.+  |++.|.+...|..|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            34544  55555555555555543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.57  E-value=0.0019  Score=30.40  Aligned_cols=22  Identities=36%  Similarity=0.839  Sum_probs=20.1

Q ss_pred             eecccccccccCchHHHhHHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                      |.|.+|+..|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6899999999999999999875

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.55  E-value=0.00072  Score=56.26  Aligned_cols=151  Identities=24%  Similarity=0.463  Sum_probs=104.4

Q ss_pred             ceeecCCCCCcccCChHHHHHHHh--hcCCC--CCcccc--cCccccCCchhHHhhhhhhcCCCCcccccCcccccccch
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHAR--MHAVQ--RPFGCR--YCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTH  147 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  147 (236)
                      .+.|  ..|...|.....|..|..  .|.++  +++.|.  .|++.|.....+..|...|.+..++.+.+..+...+...
T Consensus       289 ~~~~--~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         289 PIKS--KQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             CCCC--ccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccc
Confidence            5667  889999999999999988  78888  899999  799999999999999999888877777654555555443


Q ss_pred             hhHH-----HhHhhcCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-Cc
Q psy9360         148 TQRQ-----IHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QT  219 (236)
Q Consensus       148 ~~l~-----~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~  219 (236)
                      ..-.     .............+..  |-..+.....+..|...|....++.+....|.+.|.....+..|++.|.. .+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc
Confidence            3211     1111111222233322  55666667777777777776665555445688888888888888888877 45


Q ss_pred             ccCCccc
Q psy9360         220 FHCNLCN  226 (236)
Q Consensus       220 ~~C~~C~  226 (236)
                      +.|..++
T Consensus       447 ~~~~~~~  453 (467)
T COG5048         447 LLCSILK  453 (467)
T ss_pred             eeecccc
Confidence            4444444

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.32  E-value=0.0032  Score=29.26  Aligned_cols=17  Identities=41%  Similarity=0.571  Sum_probs=7.3

Q ss_pred             cccccCChhhHHHHHHhh
Q psy9360         198 CKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       198 C~~~f~~~~~l~~H~~~h  215 (236)
                      |+.... ...|.+|++.|
T Consensus         6 C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    6 CSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             SS-EES-HHHHHHHHHHH
T ss_pred             CCCcCC-HHHHHHHHHhh
Confidence            444444 44444444443

>PRK04860 hypothetical protein; Provisional

Probab=96.24  E-value=0.0032  Score=44.68  Aligned_cols=38  Identities=29%  Similarity=0.625  Sum_probs=27.6

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCCh
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDL  205 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  205 (236)
                      +|.|. |+.   ....+..|.++|+++++|.|.  .|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~--~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCR--RCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECC--CCCceeEEe
Confidence            57887 776   556677888888888888884  488777644

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.97  E-value=0.0018  Score=31.12  Aligned_cols=21  Identities=24%  Similarity=0.770  Sum_probs=12.3

Q ss_pred             eecccccccccCchHHHhHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666655554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.84  E-value=0.0082  Score=27.84  Aligned_cols=23  Identities=30%  Similarity=0.597  Sum_probs=18.8

Q ss_pred             eecccccccccCchHHHhHHHHhc
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      |+|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999999998 889999999875

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.06  E-value=0.042  Score=43.28  Aligned_cols=131  Identities=22%  Similarity=0.375  Sum_probs=87.7

Q ss_pred             ceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCc---cccC------CchhHHhhhhhhcCC----CCcccccCcc
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCD---KAFK------TSGDLSKHSAIHNGD----RPYKCNYTSC  140 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~----~~~~C~~~~C  140 (236)
                      .|.||-..|..+......|..|.+..++.  +-|.+|-   +.|.      ....|..|...-..+    ---.|.+  |
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F--C  226 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF--C  226 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh--c
Confidence            48897777888888888899998875542  4555553   2332      344567776553322    1236885  9


Q ss_pred             cccccchhhHHHhHhhcCCCCCeecccccc-------cccCchHHHhHHHHhcCCCCeeccccccc----cccCChhhHH
Q psy9360         141 GRHFRTHTQRQIHERCHLDSKPYSCHVCGR-------SFISNTHKNNHLRIHYGLKPYVCHVEGCK----RKFVDLSSLK  209 (236)
Q Consensus       141 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~~C~~~~C~----~~f~~~~~l~  209 (236)
                      ...|.+...|..|.+..+.    .|-+|.+       -|.+...|..|.+.-+    |.|.+--|.    ..|.+.-.|.
T Consensus       227 ~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el~  298 (493)
T COG5236         227 KIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTELL  298 (493)
T ss_pred             cceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHHH
Confidence            9999999999999986553    5666654       3777888888886432    555432222    3588889999


Q ss_pred             HHHHhhc
Q psy9360         210 KHTKIHT  216 (236)
Q Consensus       210 ~H~~~h~  216 (236)
                      .|+..-+
T Consensus       299 ~h~~~~h  305 (493)
T COG5236         299 EHLTRFH  305 (493)
T ss_pred             HHHHHHh
Confidence            9986543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.96  E-value=0.0061  Score=29.26  Aligned_cols=22  Identities=32%  Similarity=0.741  Sum_probs=19.5

Q ss_pred             eeccccccccccCChhhHHHHHHh
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      |.|.+  |++.|.+...|..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            67976  99999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.92  E-value=0.0071  Score=50.30  Aligned_cols=161  Identities=18%  Similarity=0.246  Sum_probs=112.5

Q ss_pred             hhHHhhhhhHHHHhhhhhhhhh--hhccC--CceeecCCCCCcccCChHHHHHHHhhcCCCCCccccc--CccccCCchh
Q psy9360          46 IYAEHLQLSEEIMKKSLQEDEK--IFEKE--KLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGD  119 (236)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~h~~--~~~~~--~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~  119 (236)
                      ...+..|...+.....+..|.+  .|..+  +++.|+...|++.|.....+..|...|.+..++.+..  +...+.....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            4566677778888888888888  78888  8999933389999999999999999998877766655  3444333333


Q ss_pred             HHhhhh-----hhcCCCCcccccCcccccccchhhHHHhHhhcCCCC--CeecccccccccCchHHHhHHHHhcCCCCee
Q psy9360         120 LSKHSA-----IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSK--PYSCHVCGRSFISNTHKNNHLRIHYGLKPYV  192 (236)
Q Consensus       120 l~~H~~-----~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  192 (236)
                      -..+..     .-.......+....|...+.....+..|...+....  .+.+..|...|.....+..|++.|....++.
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL  448 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCcee
Confidence            211111     112233444544457777777777888877776655  5778889999999999999999998888877


Q ss_pred             ccccccccccCChhhHH
Q psy9360         193 CHVEGCKRKFVDLSSLK  209 (236)
Q Consensus       193 C~~~~C~~~f~~~~~l~  209 (236)
                      |.   +-+.|.....+.
T Consensus       449 ~~---~~~~~~~~~~~~  462 (467)
T COG5048         449 CS---ILKSFRRDLDLS  462 (467)
T ss_pred             ec---cccccchhhhhh
Confidence            74   444444444443

>KOG2231|consensus

Probab=94.34  E-value=0.062  Score=46.60  Aligned_cols=125  Identities=25%  Similarity=0.466  Sum_probs=70.8

Q ss_pred             eeecCCCCCcccC---------------ChHHHHHHHhhcCCCCCcccccCc---ccc------CCchhHHhhhhhhcC-
Q psy9360          75 HVCTYEDCNSVFQ---------------TQAEWEEHARMHAVQRPFGCRYCD---KAF------KTSGDLSKHSAIHNG-  129 (236)
Q Consensus        75 ~~C~~~~C~~~f~---------------~~~~l~~H~~~h~~~~~~~C~~C~---~~f------~~~~~l~~H~~~h~~-  129 (236)
                      +.|  .+|+..|.               ....|+.|+...+  +.+.|.+|-   +.|      -+...|..|++.--. 
T Consensus       100 ~~C--~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H--~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d  175 (669)
T KOG2231|consen  100 HSC--HICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQH--KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPD  175 (669)
T ss_pred             hhc--CccccchhhhcccCCCccccchhHHHHHHHHHHHhh--hhhccccccccceeeeeeeehehHHHHHHHHhcCCCc
Confidence            567  77776662               6677888874332  334555543   222      233556666554211 


Q ss_pred             CCC----cccccCcccccccchhhHHHhHhhcCCCCCeecccc------cccccCchHHHhHHHHhcCCCCeeccccccc
Q psy9360         130 DRP----YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVC------GRSFISNTHKNNHLRIHYGLKPYVCHVEGCK  199 (236)
Q Consensus       130 ~~~----~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~  199 (236)
                      ++.    ..|.  .|...|.....|..|++.++    |.|..|      +..|.....|..|.+.++    |.|..+-|.
T Consensus       176 ~~s~rGhp~C~--~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~  245 (669)
T KOG2231|consen  176 DESCRGHPLCK--FCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCR  245 (669)
T ss_pred             cccccCCccch--hhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccc
Confidence            221    3576  48888888888888887654    455555      455677778888887665    444311232


Q ss_pred             -cccCChhhHHHHHH
Q psy9360         200 -RKFVDLSSLKKHTK  213 (236)
Q Consensus       200 -~~f~~~~~l~~H~~  213 (236)
                       +.|.....+..+++
T Consensus       246 ~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  246 TKKFYVAFELEIELK  260 (669)
T ss_pred             cceeeehhHHHHHHH
Confidence             23333334555555

>KOG2231|consensus

Probab=94.19  E-value=0.13  Score=44.60  Aligned_cols=22  Identities=27%  Similarity=0.700  Sum_probs=11.2

Q ss_pred             ecccccccccCchHHHhHHHHh
Q psy9360         164 SCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       164 ~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      .|..|...|.....|..|++.+
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~  205 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFD  205 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccc
Confidence            3555555555555555555443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.10  E-value=0.03  Score=44.02  Aligned_cols=90  Identities=19%  Similarity=0.424  Sum_probs=53.5

Q ss_pred             cccccCcccccccchhhHHHhHhhcCCCCCeeccccc---cccc------CchHHHhHHHHhcCCC----Ceeccccccc
Q psy9360         133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCG---RSFI------SNTHKNNHLRIHYGLK----PYVCHVEGCK  199 (236)
Q Consensus       133 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~~----~~~C~~~~C~  199 (236)
                      |.|+...|......+..|..|.++.++.  +.|.+|-   +.|.      ++..|+.|...-..+.    --.|.+  |.
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F--C~  227 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF--CK  227 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh--cc
Confidence            5676656666666677777777765543  4566652   3332      2345666655433221    135766  78


Q ss_pred             cccCChhhHHHHHHhhcCCcccCCccc
Q psy9360         200 RKFVDLSSLKKHTKIHTQQTFHCNLCN  226 (236)
Q Consensus       200 ~~f~~~~~l~~H~~~h~~~~~~C~~C~  226 (236)
                      ..|.+-..|.+|+|..+.+-|.|+.-+
T Consensus       228 ~~FYdDDEL~~HcR~~HE~ChICD~v~  254 (493)
T COG5236         228 IYFYDDDELRRHCRLRHEACHICDMVG  254 (493)
T ss_pred             ceecChHHHHHHHHhhhhhhhhhhccC
Confidence            888888888888877665555554433

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.10  E-value=0.045  Score=25.71  Aligned_cols=15  Identities=53%  Similarity=0.955  Sum_probs=7.3

Q ss_pred             cccccCChhhHHHHHH
Q psy9360         198 CKRKFVDLSSLKKHTK  213 (236)
Q Consensus       198 C~~~f~~~~~l~~H~~  213 (236)
                      ||+.| ....|.+|+.
T Consensus         8 CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    8 CGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CCCEE-CHHHHHHHHH
Confidence            55555 4444555543

>KOG1146|consensus

Probab=93.32  E-value=0.034  Score=51.29  Aligned_cols=73  Identities=23%  Similarity=0.323  Sum_probs=50.1

Q ss_pred             CCCeecccccccccCchHHHhHHHH--hcCC-----------------------------------------CCeecccc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRI--HYGL-----------------------------------------KPYVCHVE  196 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~-----------------------------------------~~~~C~~~  196 (236)
                      .++|.|..|...+....+|..|+..  |..+                                         -.+.|.+ 
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~v-  594 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEV-  594 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhh-
Confidence            4568888888888888888888753  2100                                         0388876 


Q ss_pred             ccccccCChhhHHHHHHh-hcCC-cccCCccccccCccCC
Q psy9360         197 GCKRKFVDLSSLKKHTKI-HTQQ-TFHCNLCNKTYKHQQS  234 (236)
Q Consensus       197 ~C~~~f~~~~~l~~H~~~-h~~~-~~~C~~C~~~f~~~~~  234 (236)
                       |++.-.-..+|+.|+.. ++-+ +.-|..++..+.....
T Consensus       595 -c~yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~  633 (1406)
T KOG1146|consen  595 -CSYETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASL  633 (1406)
T ss_pred             -hcchhhhhhccccccccCCCCCChHHHhhhcchhhcccc
Confidence             98888888888888874 3333 3667777766655443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.31  E-value=0.065  Score=27.27  Aligned_cols=22  Identities=23%  Similarity=0.690  Sum_probs=13.3

Q ss_pred             CeecccccccccCchHHHhHHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      +|.|..|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.80  E-value=0.14  Score=25.93  Aligned_cols=23  Identities=30%  Similarity=0.609  Sum_probs=20.4

Q ss_pred             CeeccccccccccCChhhHHHHHHh
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      +|.|.+  |++.|.+...+..|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            588977  99999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=91.41  E-value=0.059  Score=40.16  Aligned_cols=41  Identities=27%  Similarity=0.647  Sum_probs=19.5

Q ss_pred             cccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHH
Q psy9360         165 CHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKH  211 (236)
Q Consensus       165 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H  211 (236)
                      |.-|++.|.....|.+|++.-    -|+|.|  |.+..-+.-.|..|
T Consensus        13 cwycnrefddekiliqhqkak----hfkchi--chkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK----HFKCHI--CHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhc----cceeee--ehhhhccCCCceee
Confidence            445555555555555554421    255554  55554444444333

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.26  E-value=0.14  Score=25.84  Aligned_cols=11  Identities=45%  Similarity=1.102  Sum_probs=5.9

Q ss_pred             eeccccccccc
Q psy9360         163 YSCHVCGRSFI  173 (236)
Q Consensus       163 ~~C~~C~~~f~  173 (236)
                      |+|.+||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45555555544

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=90.71  E-value=0.65  Score=30.77  Aligned_cols=27  Identities=19%  Similarity=0.337  Sum_probs=22.4

Q ss_pred             eec--cccccccccCChhhHHHHHHhhcC
Q psy9360         191 YVC--HVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       191 ~~C--~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |.|  ..+.|+..+.+...+++|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            899  223499999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=90.66  E-value=0.83  Score=36.81  Aligned_cols=52  Identities=23%  Similarity=0.547  Sum_probs=42.0

Q ss_pred             CeecccccccccCchHHHhHHHHhcCC-----------------------CCeeccccccc---cccCChhhHHHHHHhh
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGL-----------------------KPYVCHVEGCK---RKFVDLSSLKKHTKIH  215 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~~~C~---~~f~~~~~l~~H~~~h  215 (236)
                      |-.|-.|+..+.+...-..||..+++-                       .-+.|-+  |.   +.|.+..+.++||+..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~--CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLF--CNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEE--eccccCcccccHHHHHHHhhc
Confidence            467888999999888888999887763                       2488877  88   8899999999999753

>KOG1146|consensus

Probab=89.11  E-value=0.096  Score=48.52  Aligned_cols=115  Identities=15%  Similarity=0.135  Sum_probs=59.9

Q ss_pred             CCCCcccCChHHHHHHHhhcC----CCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHh
Q psy9360          80 EDCNSVFQTQAEWEEHARMHA----VQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHER  155 (236)
Q Consensus        80 ~~C~~~f~~~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~  155 (236)
                      ..|-.-|........+-....    ....+.|..|+..+...-.+. |+-+   ..+|.|.  .|...|.....|..|++
T Consensus      1232 ~~~e~~f~~~~~~~~~a~~~~~~~~~sGe~~c~~~~~~~~~~~~~~-~l~~---~~~~~~~--~~~~~~~~~~~l~~~~~ 1305 (1406)
T KOG1146|consen 1232 NALEQPFPQEPEPTATAPPKPPELPASGEGECGAVDELLTPSFGIS-TLDV---THRYLCR--QCKMAFDGEAPLTAHQR 1305 (1406)
T ss_pred             HhhhcCccCcccccccCCCCCCcCcCCCcchhhhccccccCcccee-eccc---chhHHHH--HHHhhhcchhHHHHHHH
Confidence            455555555555544432110    112256777777766655554 4333   2346666  57777777766666662


Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHh
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      .           |-+.+.......-|...+-...+| |.+  |...|.....|.+|+++
T Consensus      1306 k-----------~~~~~~~~~~~~~~~l~~~d~~~~-c~~--c~~~~~~~~alqihm~~ 1350 (1406)
T KOG1146|consen 1306 K-----------FCFAGRGSGGSMPPPLRVPDCTYH-CLA--CEVLLSGREALQIHMRS 1350 (1406)
T ss_pred             H-----------HHhccCccccCCCCcccCcccccc-chH--HHhhcchhHHHHHHHHH
Confidence            1           112222222222233233333445 766  88888888888888774

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.45  E-value=0.23  Score=27.97  Aligned_cols=21  Identities=24%  Similarity=0.449  Sum_probs=9.3

Q ss_pred             CeecccccccccCchHHHhHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHL  182 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~  182 (236)
                      -++|+.||..|....++.+|.
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHV   37 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHV   37 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHh
Confidence            344444444444444444444

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0

Probab=87.33  E-value=0.36  Score=32.75  Aligned_cols=59  Identities=29%  Similarity=0.677  Sum_probs=37.2

Q ss_pred             CCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCC--hhhHHHHHHhhcCCcccCCccccccCccCC
Q psy9360         158 LDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVD--LSSLKKHTKIHTQQTFHCNLCNKTYKHQQS  234 (236)
Q Consensus       158 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~--~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~  234 (236)
                      .+.+.|+|.+|..+...+.-          -||-+|    ||.+--.  -..|++|-.+|.    .|+.|.-+|++.+.
T Consensus        76 ~d~~lYeCnIC~etS~ee~F----------LKPneC----CgY~iCn~Cya~LWK~~~~yp----vCPvCkTSFKss~~  136 (140)
T PF05290_consen   76 LDPKLYECNICKETSAEERF----------LKPNEC----CGYSICNACYANLWKFCNLYP----VCPVCKTSFKSSSS  136 (140)
T ss_pred             cCCCceeccCcccccchhhc----------CCcccc----cchHHHHHHHHHHHHHcccCC----CCCccccccccccc
Confidence            44567889888887766533          267777    6643222  344565555553    68888888876553

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=87.26  E-value=0.51  Score=24.47  Aligned_cols=33  Identities=24%  Similarity=0.659  Sum_probs=16.6

Q ss_pred             ccccCcccccccchhhHHHhHhhcCCCCCeeccccccccc
Q psy9360         134 KCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFI  173 (236)
Q Consensus       134 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  173 (236)
                      .|+  .|+..|.-...     ++..+....+|+.|+..|.
T Consensus         4 ~CP--~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    4 TCP--NCQTRFRVPDD-----KLPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             ECC--CCCceEEcCHH-----HcccCCcEEECCCCCcEee
Confidence            455  56666655443     2223333466666666553

>TIGR00622 ssl1 transcription factor ssl1

Probab=85.83  E-value=1.1  Score=29.65  Aligned_cols=20  Identities=25%  Similarity=0.544  Sum_probs=12.0

Q ss_pred             CCcccccCccccCCchhHHh
Q psy9360         103 RPFGCRYCDKAFKTSGDLSK  122 (236)
Q Consensus       103 ~~~~C~~C~~~f~~~~~l~~  122 (236)
                      -|..|++|+.+.-....|.+
T Consensus        14 LP~~CpiCgLtLVss~HLAR   33 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLAR   33 (112)
T ss_pred             CCCcCCcCCCEEeccchHHH
Confidence            45567777766665555544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=85.24  E-value=0.78  Score=23.61  Aligned_cols=29  Identities=17%  Similarity=0.605  Sum_probs=13.3

Q ss_pred             cccccccchhhHHHhHhhcCCCCCeecccccccc
Q psy9360         139 SCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSF  172 (236)
Q Consensus       139 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  172 (236)
                      .|+..|.-...     ++.......+|+.|+..|
T Consensus         7 ~C~~~y~i~d~-----~ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    7 NCQAKYEIDDE-----KIPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             CCCCEEeCCHH-----HCCCCCcEEECCCCCCEe
Confidence            45555544433     222223345566655554

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=84.86  E-value=0.6  Score=23.69  Aligned_cols=12  Identities=33%  Similarity=0.805  Sum_probs=7.0

Q ss_pred             eecccccccccC
Q psy9360         163 YSCHVCGRSFIS  174 (236)
Q Consensus       163 ~~C~~C~~~f~~  174 (236)
                      |+|.+||..+..
T Consensus         3 ~~C~~CG~i~~g   14 (34)
T cd00729           3 WVCPVCGYIHEG   14 (34)
T ss_pred             EECCCCCCEeEC
Confidence            566666655543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.56  E-value=1.8  Score=28.65  Aligned_cols=25  Identities=32%  Similarity=0.549  Sum_probs=23.0

Q ss_pred             eec----ccccccccCchHHHhHHHHhcC
Q psy9360         163 YSC----HVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       163 ~~C----~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      |.|    ..|+....+...+..|++.+++
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            899    9999999999999999998764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2186|consensus

Probab=84.27  E-value=0.58  Score=35.46  Aligned_cols=42  Identities=21%  Similarity=0.424  Sum_probs=20.3

Q ss_pred             CCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhh
Q psy9360          80 EDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHS  124 (236)
Q Consensus        80 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  124 (236)
                      ..||....- ..+.+|+..-++ ..|.|-.|+.+|.. ..+..|.
T Consensus         7 nvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    7 NVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             hhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhh
Confidence            555554332 334445544433 34555555555554 3344443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.38  E-value=0.59  Score=26.33  Aligned_cols=30  Identities=17%  Similarity=0.203  Sum_probs=24.6

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      -||.-+.|+-  |+..|..+.++.+|+..-++
T Consensus        13 DGE~~lrCPR--C~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPR--CGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCc--hhHHHHHhHHHHHHhhHHhh
Confidence            3567799965  99999999999999985443

>KOG2893|consensus

Probab=83.06  E-value=0.52  Score=35.34  Aligned_cols=47  Identities=28%  Similarity=0.556  Sum_probs=37.6

Q ss_pred             eeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhh-hhh
Q psy9360          75 HVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHS-AIH  127 (236)
Q Consensus        75 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h  127 (236)
                      -.|  .-|++.|-...-|..|++.    +-|+|.+|.+...+.-.|..|- .+|
T Consensus        11 pwc--wycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   11 PWC--WYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             cee--eecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            357  6799999999999888765    4489999999888888888883 344

>KOG2482|consensus

Probab=82.96  E-value=3.8  Score=32.73  Aligned_cols=51  Identities=20%  Similarity=0.298  Sum_probs=37.9

Q ss_pred             eecccccccccCchHHHhHHHHhcC---------------------------CCCeeccccccccccCChhhHHHHHHhh
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHYG---------------------------LKPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      .+|-.|....-+...|..||..-+.                           .+...|  ..|.-.|.....|..||..+
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c--~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRC--AECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhcccc--ccccccccCcchhhhhcccc
Confidence            5888898888888889999875422                           113556  45888899999999998644

>KOG2785|consensus

Probab=82.69  E-value=5  Score=32.55  Aligned_cols=52  Identities=21%  Similarity=0.417  Sum_probs=42.2

Q ss_pred             CCcccccCcccccccchhhHHHhHhhcCC-----------------------CCCeeccccc---ccccCchHHHhHHHH
Q psy9360         131 RPYKCNYTSCGRHFRTHTQRQIHERCHLD-----------------------SKPYSCHVCG---RSFISNTHKNNHLRI  184 (236)
Q Consensus       131 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~  184 (236)
                      .|-.|-+  |+..+.+...-..|+..+++                       ...+.|-.|+   +.|.+..+.+.||..
T Consensus       165 ~Pt~CLf--C~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLF--CDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceee--cCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            3456774  99999999999999998877                       2337788888   999999999999963

>KOG4173|consensus

Probab=82.13  E-value=0.43  Score=34.93  Aligned_cols=82  Identities=27%  Similarity=0.530  Sum_probs=61.2

Q ss_pred             ceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhhhc----------CCCCcccccCccccc
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHN----------GDRPYKCNYTSCGRH  143 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------~~~~~~C~~~~C~~~  143 (236)
                      .+.|+-..|...|.+...+..|-.+.++   -.|.+|.+.|.+..-|..|+...+          |...|.|-+..|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            4778667788888887777777544444   379999999999999999976432          455688887789999


Q ss_pred             ccchhhHHHhHh-hcC
Q psy9360         144 FRTHTQRQIHER-CHL  158 (236)
Q Consensus       144 f~~~~~l~~H~~-~h~  158 (236)
                      |.....-..|+- .|.
T Consensus       156 FkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhHHHHhcc
Confidence            988877777754 443

>KOG2482|consensus

Probab=81.39  E-value=1.5  Score=34.94  Aligned_cols=107  Identities=22%  Similarity=0.373  Sum_probs=74.5

Q ss_pred             eeecCCCCCccc-CChHHHHHHHhh-cC---C--C----------------CCcccccCccccCCchhHHhhhhh--hcC
Q psy9360          75 HVCTYEDCNSVF-QTQAEWEEHARM-HA---V--Q----------------RPFGCRYCDKAFKTSGDLSKHSAI--HNG  129 (236)
Q Consensus        75 ~~C~~~~C~~~f-~~~~~l~~H~~~-h~---~--~----------------~~~~C~~C~~~f~~~~~l~~H~~~--h~~  129 (236)
                      .+|  -.|...+ .+.+.+..|+-. |.   |  +                ..+.|--|.+.|..+..|+.||+.  |-.
T Consensus       145 lqC--lFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  145 LQC--LFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eEE--EEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            456  7787543 466667777642 32   1  0                136899999999999999999875  311


Q ss_pred             ----------------------------------------------------CCC--cccccCcccccccchhhHHHhHh
Q psy9360         130 ----------------------------------------------------DRP--YKCNYTSCGRHFRTHTQRQIHER  155 (236)
Q Consensus       130 ----------------------------------------------------~~~--~~C~~~~C~~~f~~~~~l~~H~~  155 (236)
                                                                          ..+  .+|-+  |....-+...|..|++
T Consensus       223 inPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLf--C~~~~en~~~l~eHmk  300 (423)
T KOG2482|consen  223 INPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLF--CTNFYENPVFLFEHMK  300 (423)
T ss_pred             cCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEe--eccchhhHHHHHHHHH
Confidence                                                                011  46774  8888888899999988


Q ss_pred             hcCC---------------------------CCCeecccccccccCchHHHhHHHHh
Q psy9360         156 CHLD---------------------------SKPYSCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       156 ~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      .-+.                           ...-.|..|.-.|-....|..|+..+
T Consensus       301 ~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  301 IVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            5332                           11246899999999999999999643

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.22  E-value=1.3  Score=29.33  Aligned_cols=14  Identities=36%  Similarity=0.904  Sum_probs=6.7

Q ss_pred             CCeecccccccccC
Q psy9360         161 KPYSCHVCGRSFIS  174 (236)
Q Consensus       161 ~~~~C~~C~~~f~~  174 (236)
                      .|..|+.||..|.-
T Consensus        25 ~PivCP~CG~~~~~   38 (108)
T PF09538_consen   25 DPIVCPKCGTEFPP   38 (108)
T ss_pred             CCccCCCCCCccCc
Confidence            34445555554443

The function of members of this family is unknown.

>KOG2186|consensus

Probab=80.52  E-value=1.5  Score=33.33  Aligned_cols=46  Identities=28%  Similarity=0.636  Sum_probs=24.9

Q ss_pred             cccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHH
Q psy9360         133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       133 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |.|.  .||....- ..+-+|+...++ .-|.|-.||..|.. ..+..|..
T Consensus         4 FtCn--vCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCN--VCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehh--hhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            4455  46655433 344456655555 44666666666665 44555554

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=80.16  E-value=1.3  Score=29.30  Aligned_cols=30  Identities=30%  Similarity=0.682  Sum_probs=20.8

Q ss_pred             eecccccccccCchHHHhHHHHhcCCCCeeccccccccccCCh
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDL  205 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  205 (236)
                      ..|+.||..|-..           +..|..|+.  ||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~--CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPK--CGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCC--CCCccCcc
Confidence            5777788777664           346777755  88777665

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	236
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-22
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-16
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		4e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-14
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-14
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-05
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-13
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-13
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-13
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-13
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-13
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-13
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-13
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-13
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-04
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		5e-11
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		8e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-10
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		9e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-07
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-07
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		3e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		4e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		4e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-04
2eoz_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		7e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 54  SEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKA 113
           S  + + +L+  EK +       C   +C   F       EH R H  ++P+ C  C K+
Sbjct: 7   SSSVAQAALEPGEKPY------ACP--ECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKS 58
Query: 114 FKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFI 173
           F    DL++H   H G++PYKC    CG+ F      + H+R H   KPY+C  CG+SF 
Sbjct: 59  FSDKKDLTRHQRTHTGEKPYKC--PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFS 116
Query: 174 SNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYKHQ 232
              H   H R H G KPY C    C + F    +L  H + HT ++ + C  C K++  +
Sbjct: 117 QLAHLRAHQRTHTGEKPYKC--PECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Query: 233 QSI 235
            ++
Sbjct: 175 DAL 177

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 102 QRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLD 159
           +RPF C Y  C+K +     L  HS  H G++PY+C++  C R F    Q + H+R H  
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIH 215
            KP+ C  C R F  + H   H R H G KP+ C    C++KF     L +H  +H
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 159 DSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           + +P+ C    C + +   +H   H R H G KPY C  + C+R+F     LK+H + HT
Sbjct: 3   EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT 62
Query: 217 Q-QTFHCNLCNKTY 229
             + F C  C + +
Sbjct: 63  GVKPFQCKTCQRKF 76

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F   T    H R H   KP+ C +C R+F  +T  N H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF  L +  +HTKIH +Q
Sbjct: 62  PFACDI--CGRKFATLHTRDRHTKIHLRQ 88

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F   T    H R H   KP+ C +C R+F      N H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF  L +  +HTKIH +Q
Sbjct: 62  PFACDI--CGRKFATLHTRTRHTKIHLRQ 88

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYKHQQSI 235
           +PY C VE C R+F   ++L  H +IHT Q+ F C +C + +  Q S+
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASL 50

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 101 VQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS 160
           +++P+ C  C K+F  S +L KH   H G++PYKC    CG+ F   +  Q H+R H   
Sbjct: 1   MEKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKC--PECGKSFSQSSDLQKHQRTHTGE 58
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           KPY C  CG+SF  + H + H R H   K
Sbjct: 59  KPYKCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQT 219
           KPY C  CG+SF  +++   H R H G KPY C    C + F   S L+KH + HT ++ 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKC--PECGKSFSQSSDLQKHQRTHTGEKP 60
Query: 220 FHCNLCNKTY 229
           + C  C K++
Sbjct: 61  YKCPECGKSF 70

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F    +   H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF      K+HTKIH +Q
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHLRQ 88

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F   +    H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF      K+HTKIH +Q
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHLRQ 88

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 77  CTYEDCNSVFQTQAEWEEHAR---MHAVQRPF-----GCRYCDKAFKTSGDLSKHSAIHN 128
           C ++ C+  F +Q +   H     +H  ++ F     GC    + FK    L  H   H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVCGRSFISNTHKNNHL-RIH 185
           G++P+KC +  C + +      + H R H   KPY C    C ++F + + +  H  R H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKI 214
              KPYVC + GC +++ D SSL+KH K 
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 135 CNYTSCGRHFRTHTQRQIH---ERCHLDSKPYSCHVCG-----RSFISNTHKNNHLRIHY 186
           C +  C + F +  Q   H   E  H + K + CH  G     R F +      H+R H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 187 GLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           G KP+ C  EGC++ +  L +LK H + HT +
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGE 95

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F    +   H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF      K+HTKIH +Q
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHLRQ 88

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F    +   H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF      K+HTKIH +Q
Sbjct: 61  PFACDI--CGRKFARSDERKRHTKIHLRQ 87

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F        H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF      K+HTKIH +Q
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHLRQ 88

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 73  KLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGD 130
           K ++C++ DC + +    + + H   H  ++PF C+   C+K F +   L++HS  H G+
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 131 RPYKCNYTSCGRHFRTHTQRQIH-ERCH-LDSKPYSCHV--CGRSFISNTHKNNHLRIHY 186
           + + C+   C   F T    + H  R H +    Y CH   CG++F  +     H   H 
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130
Query: 187 GLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
              PY C  EGC ++F   S LK+H K+H 
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F        H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           P+ C +  C RKF      K+HTKIH +Q
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHLRQ 88

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           +RPY C   SC R F    +   H R H   KP+ C +C R+F  + H   H+R H G K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQ 217
           P+ C +  C RKF      K+HTKIH +
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHLR 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTY 229
           +PY C VE C R+F     L +H +IHT Q+ F C +C + +
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 44

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 76  VCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
            C ++ C  +F+  +   +H   H   R   C  C KAF  S  L +H  +H G++P++C
Sbjct: 7   ACPHKGCTKMFRDNSAMRKHLHTHG-PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 136 NYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLK 189
            +  CG+ F      + H R H   +PY C    C + F  +T+  +H+  H   K
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 110 CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV-- 167
           C K F+ +  + KH   H G R + C    CG+ F   ++ + H+  H   KP+ C    
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69
Query: 168 CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ 217
           CG+ F  + +   H+RIH G +PYVC  +GC +KF   ++LK H   H +
Sbjct: 70  CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLR 183
           S+  +GD+ Y C    CG+ F   +QR  H   HL  +PY C VCG+ F    H   H++
Sbjct: 2   SSGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58
Query: 184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHT 212
           IH G+KPY C++  C ++F+   S  +H 
Sbjct: 59  IHTGIKPYECNI--CAKRFMWRDSFHRHV 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 105 FGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
           F C+ C K+FK S  LS H  IH+  RPY C Y  CG+ F   +  + H   H   KP+ 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 165 CHVCGRSFISNTHKNNHLRIHYG 187
           C VCG++F  +++   H R H G
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 163 YSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFH- 221
           + C +CG+SF  ++  + HL IH   +PY C  + C ++F   S +KKHT IHT +  H 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 222 CNLCNKTYKHQQSIL 236
           C +C K +    +++
Sbjct: 60  CQVCGKAFSQSSNLI 74

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 108 RYCDKAFKTSGDLSKHSAIHNGDRPYK----CNYTSC---GRHFRTHTQRQIHERCHLDS 160
           + CD+ F T  +L  H  + +   P +    C +  C   G+ F+   +   H R H   
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE 88
Query: 161 KPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           KP+ C    CG+ F  + +   H R H G KP+ C  EGC R+F + S  KKH  +HT
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 140 CGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCK 199
           CGRHF       IHER H D +PY+C +C ++F    H  +H  IH   KP+ C  + C 
Sbjct: 23  CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC--QECG 80
Query: 200 RKFVDLSSLKKHTKIHTQQT 219
           + F    +L  H  +H Q +
Sbjct: 81  KGFCQSRTLAVHKTLHMQTS 100

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIH 153
           E  R+H    P     C K +  S  L  H   H G++PYKC +  C   F    +   H
Sbjct: 11  EKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH 66
Query: 154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
            R H  +KP+ C VC RSF  + H   H++ H
Sbjct: 67  YRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 168 CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCN 226
           C + +  ++H   HLR H G KPY C  EGC  +F     L +H + HT  + F C +CN
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 227 KTY 229
           +++
Sbjct: 83  RSF 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 80  EDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTS 139
           E C   F  + + + H R H   +P+ C+ CD A   S  L+KH  IH+ +RP+KC    
Sbjct: 12  EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI-- 69
Query: 140 CGRHFRTHTQRQIHERCHL-DSKPYS 164
           C    R  +Q  +H R H  DS P S
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDSGPSS 95

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQ 218
           S P+ C VCG+ F        H+R H G+KPY C    C     D SSL KH +IH+ ++
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDER 63
Query: 219 TFHCNLC 225
            F C +C
Sbjct: 64  PFKCQIC 70

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 107 CRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS--KPYS 164
           C  C K F+    L++H   H+G++PY C    CG  F+   +   H R H  S  KPY 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 165 CHVCGRSFISNTHKNNHLR-IHYG 187
           C  CG+ F    H N H++ +H G
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 140 CGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL--KPYVCHVEG 197
           CG+ FR       H+  H   KPYSC VCG  F      + H+R H G   KPY+C  + 
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC--QS 70
Query: 198 CKRKFVDLSSLKKHTK-IHTQQT 219
           C + F     L  H K +H+  +
Sbjct: 71  CGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 110 CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCG 169
           C K +  S  L  H   H G++PY C++  CG  F    +   H R H   +P+ C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 170 RSFISNTHKNNHLRIHY 186
           R+F  + H   H++ H+
Sbjct: 73  RAFSRSDHLALHMKRHF 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 168 CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCN 226
           CG+++  ++H   HLR H G KPY C  +GC  KF     L +H + HT  + F C  C+
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 227 KTY 229
           + +
Sbjct: 73  RAF 75

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 110 CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCG 169
           C K +  S  L  H   H G++PY C++  CG  F    +   H R H   +P+ C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 170 RSFISNTHKNNHLRIHY 186
           R+F  + H   H++ H+
Sbjct: 74  RAFSRSDHLALHMKRHF 90

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 168 CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCN 226
           CG+++  ++H   HLR H G KPY C  +GC  KF     L +H + HT  + F C  C+
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 227 KTY 229
           + +
Sbjct: 74  RAF 76

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 73  KLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGD 130
           K ++C++ DC + +    + + H   H  ++PF C+   C+K F +   L++HS  H G+
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61
Query: 131 RPYKCNYTSCGRHFRTHTQRQIH 153
           + + C+   C   F T    + H
Sbjct: 62  KNFTCDSDGCDLRFTTKANMKKH 84

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC--HVCGRSFISNTHKNNHLRIHYGL 188
           + Y C++  CG  +  + + Q H   H   KP+ C    C + F S  H   H   H G 
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61
Query: 189 KPYVCHVEGCKRKFVDLSSLKKH 211
           K + C  +GC  +F   +++KKH
Sbjct: 62  KNFTCDSDGCDLRFTTKANMKKH 84

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKP 162
           +P+ C  C  +F+  G+L+ H  +H G++PY+CN   CG  F      + H R H   KP
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           KPY C  C  SF    +  +H  +H G KPY C++  C  +F   ++LK HT+IH+ +
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGE 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 91  EWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQR 150
           EW++  R     R + C  C K+F  S DLSKH   H G++PYKC+   CG+ F   +  
Sbjct: 10  EWQQRER-----RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHL 62
Query: 151 QIHERCHLDSKPYS 164
             H R H  S P S
Sbjct: 63  IGHHRVHTGSGPSS 76

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           R YKC+   CG+ F   +    H R H   KPY C  CG++FI  +H   H R+H G  P
Sbjct: 17  RRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 102 QRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSK 161
           ++P+GC  C KAF  S  L +H  +H G++PYKC    CG+ F  ++    H+R H  S 
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIH-TSG 68
Query: 162 PYS 164
           P S
Sbjct: 69  PSS 71

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           KPY C  CG++F  ++    H R+H G KPY C +E C + F   S L  H +IHT
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC-LE-CGKAFSQNSGLINHQRIHT 66

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI 214
           KP+ C +C R+F  + H   H+R H G KP+ C +  C RKF      K+H  I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDI 53

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 68  IFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
           +  K + + C  E C+  F    E   H R+H  Q+PF CR C + F  S  L+ H   H
Sbjct: 13  VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
           RPY C   SC R F    +   H R H   KP+ C +C R+F  + H   H+R H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTY 229
           ++PY C VE C R+F     L +H +IHT Q+ F C +C + +
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
           +RP+ CN+  CG+ +R  +    H R HL  +P SC  CG+ F   +  N HL++H
Sbjct: 2   ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI 214
           R H+ S P     CG+++  ++H   H R H G KP+ C  +GC+R+F     L +H + 
Sbjct: 16  RSHICSHP----GCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Query: 215 H 215
           H
Sbjct: 72  H 72

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 66  EKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSA 125
           E I +    ++C    C   +        H  +H+ ++ + CRYC+K F  +   +KH  
Sbjct: 14  ELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI 71
Query: 126 IHNGDRPYKCNYTSCGRHF 144
            H G+R Y+C   +CG+ F
Sbjct: 72  HHTGERRYQC--LACGKSF 88

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 105 FGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
           + C  C +++     L +H  IH+ ++ Y C Y  C + F     R  HE  H   + Y 
Sbjct: 23  YICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQ 80
Query: 165 CHVCGRSFISNTHKNNHLR 183
           C  CG+SFI+    ++H++
Sbjct: 81  CLACGKSFINYQFMSSHIK 99

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 82  CNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSA---IHNGDRPYKCNYT 138
           C+  F ++   + H R H  ++PF C  C K +    +L +H A   ++  ++ + C+  
Sbjct: 13  CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV- 71
Query: 139 SCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHL-RIHYG 187
            C   FR   + ++H   H    PY C  C + F+      +H+ ++H G
Sbjct: 72  -CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2EOZ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 809- 841) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIH 185
           KPYSC+VCG++F+ + H N HLR+H
Sbjct: 11  KPYSCNVCGKAFVLSAHLNQHLRVH 35

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           KPY C+ CG+ F  N+H  NH RIH G+KP
Sbjct: 11  KPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           KPY C+ CG+SFI  +H N H RIH G KP
Sbjct: 11  KPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 80  EDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKH 123
           E+C    +  +  ++H R H   RP+ C YC+ +FKT G+L+KH
Sbjct: 5   EECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           KPY C+ CG+ F  N+H  NH RIH G KP
Sbjct: 11  KPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	236
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-33
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-29
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-33
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-31
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-15
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-30
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-22
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-23
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-20
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-21
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-19
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-15
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-14
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	9e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	7e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-04

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  118 bits (298), Expect = 2e-33
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 14/178 (7%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNG 129
            K ++C++ DC + +    + + H   H  ++PF C+   C+K F +   L++HS  H G
Sbjct: 10  YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69

Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSK--PYSCHV--CGRSFISNTHKNNHLRIH 185
           ++ + C+   C   F T    + H     + K   Y CH   CG++F  +     H   H
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

Query: 186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT----QQTFHCNLCNKTY----KHQQSI 235
               PY C  EGC ++F   S LK+H K+H     ++   C+   KT+    KH    
Sbjct: 130 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  107 bits (270), Expect = 2e-29
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 95  HARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQI 152
              +  V + + C +  C  A+  +  L  H   H G++P+ C    C + F +      
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 153 HERCHLDSKPYSC--HVCGRSFISNTHKNNHLRIHYGLK--PYVCHVEGCKRKFVDLSSL 208
           H   H   K ++C    C   F +  +   H    + +K   YVCH E C + F   + L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 209 KKHTKIHT 216
           K H   HT
Sbjct: 123 KVHQFSHT 130

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 92.7 bits (231), Expect = 2e-23
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKN 179
              A+    + Y C++  CG  +  + + Q H   H   KP+ C    C + F S  H  
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT---QQTFHCNL--CNKTYKHQQS 234
            H   H G K + C  +GC  +F   +++KKH           + C+   C K +K    
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.4 bits (194), Expect = 4e-18
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAV--QRPFGCRY--CDKAFKTSGDLSKHSAIH 127
           EK   C  + C+  F T+A  ++H           + C +  C KAFK    L  H   H
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

Query: 128 NGDRPYKCNYTSCGRHFRTHTQRQIHERCH---LDSKPYSCHVCGRSFISNTHKNNHLRI 184
               PY+C +  C + F   ++ + HE+ H      K  SC   G+++    +  +    
Sbjct: 130 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW--TLYLKHVAEC 187

Query: 185 H 185
           H
Sbjct: 188 H 188

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  115 bits (291), Expect = 7e-33
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 11/151 (7%)

Query: 77  CTYEDCNSVFQTQAEWEEH---ARMHAVQRPFGCRYCD-----KAFKTSGDLSKHSAIHN 128
           C ++ C+  F +Q +   H     +H  ++ F C +       + FK    L  H   H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKNNH-LRIH 185
           G++P+KC +  C + +      + H R H   KPY C    C ++F + + +  H  R H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
              KPYVC + GC +++ D SSL+KH K   
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 80.3 bits (199), Expect = 3e-19
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 8/124 (6%)

Query: 72  EKLHVCTYEDCNSV---FQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAI 126
            K  VC +  C+     F+ Q     H R H  ++P  C +  C K++    +L  H   
Sbjct: 32  RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

Query: 127 HNGDRPYKCNYTSCGRHFRTHTQRQIH-ERCHLDSKPYSCHV--CGRSFISNTHKNNHLR 183
           H G++PY C +  C + F   + R  H  R H + KPY C +  C + +   +    H++
Sbjct: 92  HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

Query: 184 IHYG 187
             +G
Sbjct: 152 TVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.9 bits (185), Expect = 3e-17
 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 28/117 (23%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSA---IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLD 159
                  C + F +   L  H     IH   + + C++   G                  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHW--GG------------------ 41

Query: 160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                C    R F +      H+R H G KP+ C  EGC++ +  L +LK H + HT
Sbjct: 42  -----CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  109 bits (275), Expect = 6e-31
 Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 2/115 (1%)

Query: 103 RPFGC--RYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS 160
           RPF C    C+K +     L  HS  H G++PY+C++  C R F    Q + H+R H   
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIH 215
           KP+ C  C R F  + H   H R H G KP+ C    C++KF     L +H  +H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.4 bits (202), Expect = 4e-20
 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHY 186
             RP+ C Y  C + +   +  Q+H R H   KPY C    C R F  +     H R H 
Sbjct: 3   EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT 62

Query: 187 GLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           G+KP+ C  + C+RKF     LK HT+ HT
Sbjct: 63  GVKPFQC--KTCQRKFSRSDHLKTHTRTHT 90

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 67.9 bits (167), Expect = 6e-15
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           EK + C ++DC   F    + + H R H   +PF C+ C + F  S  L  H+  H G++
Sbjct: 34  EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCH 157
           P+ C + SC + F    +   H   H
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 161 KPYSC--HVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-Q 217
           +P+ C    C + +   +H   H R H G KPY C  + C+R+F     LK+H + HT  
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 218 QTFHCNLCNKT 228
           + F C  C + 
Sbjct: 65  KPFQCKTCQRK 75

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  108 bits (273), Expect = 3e-30
 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 81  DCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTS- 139
              S  Q   +      +   Q     + CD+ F T  +L  H  + +   P + N+   
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 140 ------CGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPY 191
                  G+ F+   +   H R H   KP+ C    CG+ F  + +   H R H G KP+
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 192 VCHVEGCKRKFVDLSSLKKHTKIHT 216
            C  EGC R+F + S  KKH  +HT
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 97.4 bits (243), Expect = 9e-26
 Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 13/137 (9%)

Query: 68  IFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPF---------GCRYCDKAFKTSG 118
           I E +       + C+  F T  E   H  M  V  P           C    K+FK   
Sbjct: 19  IDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 119 DLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNT 176
            L  H  +H G++P+ C +  CG+ F      +IH+R H   KP+ C    C R F +++
Sbjct: 77  KLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS 136

Query: 177 HKNNHLRIHYGLKPYVC 193
            +  H+ +H   K    
Sbjct: 137 DRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNG 129
           EK   C +  C  +F      + H R H  ++PF C +  CD+ F  S D  KH  +H  
Sbjct: 88  EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147

Query: 130 DRPYKCN 136
           D+    +
Sbjct: 148 DKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 12/94 (12%), Positives = 23/94 (24%), Gaps = 20/94 (21%)

Query: 139 SCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGC 198
           S G   +   Q    +             C R+F +      H+ + +   P   +    
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN---- 57

Query: 199 KRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQ 232
                           H      C    K++K +
Sbjct: 58  ----------------HVCYWEECPREGKSFKAK 75

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (263), Expect = 3e-28
 Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHE 154
           H R H  ++P+ C  C K+F    DL++H   H G++PYKC    CG+ F      + H+
Sbjct: 40  HQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQ 97

Query: 155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI 214
           R H   KPY+C  CG+SF    H   H R H G KPY C    C + F    +L  H + 
Sbjct: 98  RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRT 155

Query: 215 HT-QQTFHCNLCNKTYKH 231
           HT ++ + C  C K++  
Sbjct: 156 HTGEKPYKCPECGKSFSR 173

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  103 bits (260), Expect = 7e-28
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 5/138 (3%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHE 154
            A +   ++P+ C  C K+F  S  L++H   H G++PYKC    CG+ F        H+
Sbjct: 12  QAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP--ECGKSFSDKKDLTRHQ 69

Query: 155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI 214
           R H   KPY C  CG+SF    +   H R H G KPY C    C + F  L+ L+ H + 
Sbjct: 70  RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRT 127

Query: 215 HT-QQTFHCNLCNKTYKH 231
           HT ++ + C  C K++  
Sbjct: 128 HTGEKPYKCPECGKSFSR 145

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  103 bits (260), Expect = 9e-28
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 6/145 (4%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           EK + C   +C   F  + +   H R H  ++P+ C  C K+F    +L  H   H G++
Sbjct: 47  EKPYKCP--ECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEK 104

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY 191
           PY C    CG+ F      + H+R H   KPY C  CG+SF    + + H R H G KPY
Sbjct: 105 PYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162

Query: 192 VCHVEGCKRKFVDLSSLKKHTKIHT 216
            C    C + F    +L  H + HT
Sbjct: 163 KCPE--CGKSFSRRDALNVHQRTHT 185

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.4 bits (223), Expect = 2e-22
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 113 AFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSF 172
           +   S      +A+  G++PY C    CG+ F        H+R H   KPY C  CG+SF
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACP--ECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF 59

Query: 173 ISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYKH 231
                   H R H G KPY C    C + F   ++L+ H + HT ++ + C  C K++  
Sbjct: 60  SDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQ 117

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.8 bits (211), Expect = 1e-20
 Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           EK + C   +C   F  +A    H R H  ++P+ C  C K+F     L  H   H G++
Sbjct: 75  EKPYKCP--ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK 132

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           PYKC    CG+ F        H+R H   KPY C  CG+SF      N H R H G K 
Sbjct: 133 PYKCP--ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 99.5 bits (249), Expect = 6e-27
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 7/118 (5%)

Query: 103 RPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS 160
           R   C +  C K F+ +  + KH   H G R + C    CG+ F   ++ + H+  H   
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGE 60

Query: 161 KPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           KP+ C    CG+ F  + +   H+RIH G +PYVC  +GC +KF   ++LK H   H 
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 97.2 bits (243), Expect = 4e-26
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 71  KEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGD 130
           + +   C ++ C  +F+  +   +H   H   R   C  C KAF  S  L +H  +H G+
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHG-PRVHVCAECGKAFVESSKLKRHQLVHTGE 60

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGL 188
           +P++C +  CG+ F      + H R H   +PY C    C + F  +T+  +H+  H   
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

Query: 189 KPY 191
           K  
Sbjct: 121 KNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNG 129
           EK   CT+E C   F        H R+H   RP+ C +  C+K F  S +L  H   H  
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

Query: 130 DRPYK 134
            +  +
Sbjct: 120 AKNNQ 124

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 90.3 bits (225), Expect = 2e-23
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERC---HLD 159
               C  C K F +   L  H+  H G++P++C    CG+ +        HE     +  
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRS 63

Query: 160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKH-TKIHT 216
            + ++C VC  +F        H+  H G  PY C    C ++F+    L+ H  K+H+
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.9 bits (193), Expect = 1e-18
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKH---SAIHN 128
                C    C+  F ++   + H R H  ++PF C  C K +    +L +H   + ++ 
Sbjct: 5   SSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNH-LRIHYG 187
            ++ + C+   C   FR   + ++H   H    PY C  C + F+      +H +++H G
Sbjct: 63  SEQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

Query: 188 LK 189
             
Sbjct: 121 PS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.8 bits (185), Expect = 2e-17
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 15/120 (12%)

Query: 127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLR--- 183
            +G    +C   +C + F +    ++H R H   KP+ C  CG+ +    +   H     
Sbjct: 2   SSGSSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC 59

Query: 184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTY-------KHQQSI 235
           ++   + + C V  C+  F     L+ H   HT +  + C+ C++ +        H   +
Sbjct: 60  MNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL 117

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 88.3 bits (220), Expect = 6e-23
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 2/95 (2%)

Query: 99  HAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHL 158
                P  C  C K F     L  H   H G +PYKC   +C       +    H R H 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHS 60

Query: 159 DSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
           D +P+ C +C  +  +++    HLR H G      
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 80.5 bits (200), Expect = 5e-20
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHY 186
                P+KC    CG+ F    + + H RCH   KPY C  C  +   ++  N HLRIH 
Sbjct: 3   SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60

Query: 187 GLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
             +P+ C +  C     + S L  H + HT
Sbjct: 61  DERPFKCQI--CPYASRNSSQLTVHLRSHT 88

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.3 bits (163), Expect = 1e-14
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 4/94 (4%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
              H C  E C   F  + + + H R H   +P+ C+ CD A   S  L+KH  IH+ +R
Sbjct: 6   SGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
           P+KC    C    R  +Q  +H R H      S 
Sbjct: 64  PFKCQ--ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.9 bits (219), Expect = 9e-23
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIH 153
                   ++ F C++C + F  S +L  H   H  +RPY C+   C + FR     + H
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDH 64

Query: 154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
              H   KP+ C  CG+ F  +     H  +H        
Sbjct: 65  RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.1 bits (217), Expect = 2e-22
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 4/100 (4%)

Query: 117 SGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNT 176
           S   S         + + C    CGRHF       IHER H D +PY+C +C ++F    
Sbjct: 2   SSGSSGGRLPSKTKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59

Query: 177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           H  +H  IH   KP+ C  + C + F    +L  H  +H 
Sbjct: 60  HLRDHRYIHSKEKPFKC--QECGKGFCQSRTLAVHKTLHM 97

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 61.3 bits (150), Expect = 1e-12
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           +K  +C  + C   F        H R H  +RP+ C  C KAF+    L  H  IH+ ++
Sbjct: 15  KKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK 72

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
           P+KC    CG+ F       +H+  H+ +   + 
Sbjct: 73  PFKCQ--ECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 47.4 bits (114), Expect = 1e-07
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           E+ + C  + C+  F+ Q    +H  +H+ ++PF C+ C K F  S  L+ H  +H    
Sbjct: 43  ERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

Query: 132 PYKCN 136
                
Sbjct: 101 SPTAA 105

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 84.4 bits (210), Expect = 2e-21
 Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           RPY C   SC R F        H R H   KP+ C +C R+F  + H   H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 191 YVCHVEGCKRKFVDLSSLKKHTKIHT 216
           + C  + C RKF      K+HTKIH 
Sbjct: 63  FAC--DICGRKFARSDERKRHTKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 76.7 bits (190), Expect = 1e-18
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 101 VQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHL 158
           ++RP+ C    CD+ F  SG L++H  IH G +P++C    C R+F        H R H 
Sbjct: 1   MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT 58

Query: 159 DSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
             KP++C +CGR F  +  +  H +IH   K
Sbjct: 59  GEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.1 bits (152), Expect = 5e-13
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           E+ + C  E C+  F        H R+H  Q+PF CR C + F  S  L+ H   H G++
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCH 157
           P+ C+   CGR F    +R+ H + H
Sbjct: 62  PFACD--ICGRKFARSDERKRHTKIH 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 78.6 bits (195), Expect = 4e-19
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 8/107 (7%)

Query: 126 IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
             +GD+ Y C    CG+ F   +QR  H   HL  +PY C VCG+ F    H   H++IH
Sbjct: 4   GSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYKH 231
            G+KPY C++  C ++F+   S   H  + +  +++      +    
Sbjct: 61  TGIKPYECNI--CAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTE 103

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.8 bits (172), Expect = 1e-15
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           +KL+ C    C   F  +++ + H  MH   RP+GC  C K FK    L  H  IH G +
Sbjct: 8   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64

Query: 132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTH 177
           PY+CN   C + F        H      +K Y      ++    + 
Sbjct: 65  PYECN--ICAKRFMWRD--SFHRHVTSCTKSYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 59.4 bits (145), Expect = 7e-12
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTK 213
                  K Y C  CG+SF   + ++ H+ +H GL+PY C V  C +KF     L  H K
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMK 58

Query: 214 IHT-QQTFHCNLCNKTYKH 231
           IHT  + + CN+C K +  
Sbjct: 59  IHTGIKPYECNICAKRFMW 77

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 75.3 bits (186), Expect = 4e-18
 Identities = 24/88 (27%), Positives = 37/88 (42%)

Query: 99  HAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHL 158
                      C K +  S  L  H   H G++PY C++  CG  F    +   H R H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 159 DSKPYSCHVCGRSFISNTHKNNHLRIHY 186
             +P+ C  C R+F  + H   H++ H+
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 65.2 bits (160), Expect = 2e-14
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGL 188
             + C+Y  CG+ +   +  + H R H   KPY C    CG  F  +     H R H G 
Sbjct: 4   ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIH 215
           +P+ C    C R F     L  H K H
Sbjct: 64  RPFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
              +       CG+++  ++H   HLR H G KPY C  +GC  KF     L +H + HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 217 -QQTFHCNLCNKT 228
             + F C  C++ 
Sbjct: 62  GHRPFQCQKCDRA 74

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 21/56 (37%), Positives = 27/56 (48%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
           EK + C ++ C   F    E   H R H   RPF C+ CD+AF  S  L+ H   H
Sbjct: 33  EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 73.6 bits (182), Expect = 2e-17
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 105 FGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
           F C+ C K+FK S  LS H  IH+  RPY C Y  CG+ F   +  + H   H   KP+ 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 165 CHVCGRSFISNTHKNNHLRIHYG 187
           C VCG++F  +++   H R H G
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.1 bits (165), Expect = 5e-15
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYV 192
           + C    CG+ F+  +    H   H D++PY C  CG+ F   +    H  IH G KP+ 
Sbjct: 2   FDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 193 CHVEGCKRKFVDLSSLKKHTKIHT 216
           C V  C + F   S+L  H++ HT
Sbjct: 60  CQV--CGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 55.1 bits (134), Expect = 1e-10
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHE 154
           H  +H+  RP+ C+YC K F    D+ KH+ IH G++P+KC    CG+ F   +    H 
Sbjct: 20  HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ--VCGKAFSQSSNLITHS 77

Query: 155 RCH 157
           R H
Sbjct: 78  RKH 80

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 102 QRPFGCR--YCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLD 159
           +R   C    C K +  S  L  H   H G++PYKC +  C   F    +   H R H  
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG 72

Query: 160 SKPYSCHVCGRSFISNTHKNNHLRIH 185
           +KP+ C VC RSF  + H   H++ H
Sbjct: 73  AKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 73.4 bits (181), Expect = 3e-17
 Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 10/106 (9%)

Query: 113 AFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGR 170
           +  +SG   +        R + C+Y  C + +   +  + H R H   KPY C    C  
Sbjct: 2   SSGSSGPDLEK------RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55

Query: 171 SFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
            F  +     H R H G KP+ C V  C R F     L  H K H 
Sbjct: 56  RFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 63.4 bits (155), Expect = 1e-13
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 144 FRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFV 203
             +        R H    P     C + +  ++H   HLR H G KPY C  EGC  +F 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 204 DLSSLKKHTKIHT-QQTFHCNLCNKTY 229
               L +H + HT  + F C +CN+++
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSF 85

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 20/56 (35%), Positives = 28/56 (50%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
           EK + CT+E C+  F    E   H R H   +PF C  C+++F  S  L+ H   H
Sbjct: 43  EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 73.3 bits (181), Expect = 3e-17
 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHY 186
            +G     C    CG+ FR       H+  H   KPYSC VCG  F      + H+R H 
Sbjct: 2   SSGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 59

Query: 187 G--LKPYVCHVEGCKRKFVDLSSLKKHTK-IHT 216
           G   KPY+C    C + F     L  H K +H+
Sbjct: 60  GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.5 bits (179), Expect = 5e-17
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 104 PFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHL--DSK 161
              C  C K F+    L++H   H+G++PY C    CG  F+   +   H R H     K
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 162 PYSCHVCGRSFISNTHKNNHL-RIHYGLK 189
           PY C  CG+ F    H N H+ ++H G  
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 71.7 bits (177), Expect = 7e-17
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 117 SGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNT 176
           SG   +        R YKC+   CG+ F   +    H R H   KPY C  CG++FI  +
Sbjct: 3   SGSSGRSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 177 HKNNHLRIHYGLKPY 191
           H   H R+H G  P 
Sbjct: 61  HLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.3 bits (150), Expect = 6e-13
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIH 153
                   +R + C  C K+F  S DLSKH   H G++PYKC+   CG+ F   +    H
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGH 65

Query: 154 ERCHLDSKPY 163
            R H  S P 
Sbjct: 66  HRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHT 212
            E    + + Y C  CG+SF  ++  + H R H G KPY C  + C + F+  S L  H 
Sbjct: 9   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHH 66

Query: 213 KIHT 216
           ++HT
Sbjct: 67  RVHT 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.7 bits (94), Expect = 4e-05
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
            + + C  ++C   F   ++  +H R H  ++P+ C  C KAF     L  H  +H G  
Sbjct: 16  RRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73

Query: 132 PYK 134
           P  
Sbjct: 74  PSS 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 71.8 bits (177), Expect = 8e-17
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 3/73 (4%)

Query: 103 RPFGCRY--CDKAFKTSGDLSKHSAI-HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLD 159
               C +  C + F     L+ H    H   + + C   +CG+ F      + H + H D
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 160 SKPYSCHVCGRSF 172
           ++ Y C   G S 
Sbjct: 66  TRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 127 HNGDRPYKCNYTSCGRHFRTHTQRQIHER-CHLDSKPYSC--HVCGRSFISNTHKNNHLR 183
            +G     C++  CGR F        H++  H+  K +SC    CG+SF    H   H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 184 IHYGLKPYVCHVEGC 198
           +H   + Y+C   G 
Sbjct: 62  LHSDTRDYICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 60.3 bits (147), Expect = 1e-12
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 161 KPYSCHV--CGRSFISNTHKNNHLRI-HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT- 216
               C    CGR F +  + N+H +  H   K + C    C + F     LK+H K+H+ 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 217 QQTFHCNLCNKTY 229
            + + C     + 
Sbjct: 66  TRDYICEFSGPSS 78

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 120 LSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKN 179
            S  S IH+G++PY C    CG+ F   +    H+R H   KPY C  CG++F  N+   
Sbjct: 2   SSGSSGIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 180 NHLRIHYGLKPY 191
           NH RIH      
Sbjct: 60  NHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIH 153
             + +H+ ++P+GC  C KAF  S  L +H  +H G++PYKC    CG+ F  ++    H
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINH 61

Query: 154 ERCHLDSKPY 163
           +R H      
Sbjct: 62  QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHT 212
               H   KPY C  CG++F  ++    H R+H G KPY C    C + F   S L  H 
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQ 62

Query: 213 KIHT 216
           +IHT
Sbjct: 63  RIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           EK + C   +C   F   +   +H R+H  ++P+ C  C KAF  +  L  H  IH    
Sbjct: 12  EKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

Query: 132 PY 133
             
Sbjct: 70  SS 71

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 70.2 bits (173), Expect = 3e-16
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTF 220
           KP+ C +C R+F  + H   H+R H G KP+ C  + C RKF      K+H  I      
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHILPI 59

Query: 221 HCNLCNKT 228
             +   + 
Sbjct: 60  LEDKVEEL 67

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 69.8 bits (172), Expect = 5e-16
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKP 162
           +PF CR C + F  S  L+ H   H G++P+ C+   CGR F    +R+ H        P
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDIQHI-LP 58

Query: 163 YSCHVCGRSFISNTH---KNNHLRIHYGLK 189
                       N H   +   L+   G +
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 8/89 (8%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKP 190
           +P++C    C R+F        H R H   KP++C +CGR F  +  +  H  I   + P
Sbjct: 2   KPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILP 58

Query: 191 YVCHVEGCKRKFVDLSSLKKHT---KIHT 216
            +      +        L+      K   
Sbjct: 59  ILEDK--VEELLSKNYHLENEVARLKKLV 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 69.9 bits (172), Expect = 5e-16
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 118 GDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCH----LDSKPYSCHVCGRSFI 173
           G        H G++PY C++  C + FR      +H + +         + C  CG++F 
Sbjct: 1   GSSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT 58

Query: 174 SNTHKNNHLRIHYGLKPYVCH 194
                  H     G       
Sbjct: 59  RRNTMARHADNCAGPDGVEGE 79

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 6/82 (7%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNG----DRPYKCNYTSCGRHFRTHTQR 150
             R H  ++P+ C +CDK F+    L  H   ++        + C+   CG+ F      
Sbjct: 6   SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTM 63

Query: 151 QIHERCHLDSKPYSCHVCGRSF 172
             H               G S 
Sbjct: 64  ARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 7/84 (8%)

Query: 151 QIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG----LKPYVCHVEGCKRKFVDLS 206
               R H   KPY+C  C ++F      + H + ++        +VC    C + F   +
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRN 61

Query: 207 SLKKHTKIHT-QQTFHCNLCNKTY 229
           ++ +H                 + 
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMH----AVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
           EK + C+   C+  F+ +   + H + +     V   F C  C K F     +++H+   
Sbjct: 13  EKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC 70

Query: 128 NGDRPYKCNYTSCGRHF 144
            G    +    + G   
Sbjct: 71  AGPDGVEGE--NSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQT-----FHCNLCNKTYKH 231
              +  R H G KPY C    C + F     L  H K +         F C+ C KT+  
Sbjct: 2   SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR 59

Query: 232 QQS 234
           + +
Sbjct: 60  RNT 62

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 69.4 bits (171), Expect = 6e-16
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 117 SGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNT 176
                 HS + + D+PYKC+   C   FR       H+  H   KPY C++CG  F    
Sbjct: 2   GHHHHHHSHMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPA 59

Query: 177 HKNNHLRIHYGLKPY 191
           +   H RIH G KPY
Sbjct: 60  NLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 60.9 bits (149), Expect = 7e-13
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIH 153
            H+ M    +P+ C  C  +F+  G+L+ H  +H G++PY+CN   CG  F      + H
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTH 64

Query: 154 ERCHLDSKPY 163
            R H   KPY
Sbjct: 65  TRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 151 QIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKK 210
             H       KPY C  C  SF    +  +H  +H G KPY C    C  +F   ++LK 
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKT 63

Query: 211 HTKIHT 216
           HT+IH+
Sbjct: 64  HTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.5 bits (96), Expect = 2e-05
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNKTYKH 231
           H ++H  + +  KPY C  + C+  F    +L  H  +HT ++ + CN+C   +  
Sbjct: 4   HHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.1 bits (95), Expect = 3e-05
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           +K + C  + C + F+ +     H  +H  ++P+ C  C   F    +L  H+ IH+G++
Sbjct: 15  DKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

Query: 132 PY 133
           PY
Sbjct: 73  PY 74

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 66.9 bits (164), Expect = 6e-15
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 110 CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCG 169
           C KAFK    L  H   H    PY+C +  C + F   ++ + HE+ H          C 
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 170 RSFI-SNTHKNNHLRIH 185
                   +  +    H
Sbjct: 69  FVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 64.6 bits (158), Expect = 4e-14
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKP 190
           Y C++ +CG+ F+ H Q ++H+  H    PY C    C + F   +    H ++H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 191 YVCHVEGCKRKFVDLSSLKKHTK 213
                + C       +   KH  
Sbjct: 62  KKD--DSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 60.7 bits (148), Expect = 1e-12
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 163 YSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQT 219
           Y CH   CG++F  +     H   H    PY C  EGC ++F   S LK+H K+H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 220 FHCNLCNKTYKH 231
              + C+   K 
Sbjct: 62  KKDDSCSFVGKT 73

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 12/52 (23%), Positives = 20/52 (38%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKH 123
           +  + C +E C+  F   +  + H ++HA         C    KT     KH
Sbjct: 29  QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 80

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 118 GDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHL--DSKPYSCHVCGRSFISN 175
           G        H+G++PY+C    C   F      ++H       +   + C  C       
Sbjct: 1   GSSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58

Query: 176 THKNNHLR-IHYGLKPY 191
           +    HLR  H    P 
Sbjct: 59  SDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 151 QIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG--LKPYVCHVEGCKRKFVDLSSL 208
               R H   KPY C++C   F  +     H+   +   +  + C    C       S L
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHC--PHCDTVIARKSDL 61

Query: 209 KKHT-KIHT 216
             H  K H+
Sbjct: 62  GVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNG--DRPYKCNYTSCGRHFRTHTQRQI 152
             R H+ ++P+ C  C   F  SG +  H    +      + C +  C       +   +
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGV 63

Query: 153 HERC-HLDSKPYS 164
           H R  H  S P S
Sbjct: 64  HLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 5/57 (8%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT---QQTFHCNLCNKTYKHQQS 234
             R H G KPY C++  C  +F    ++K H           FHC  C+     +  
Sbjct: 6   SGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 59.3 bits (144), Expect = 3e-12
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 148 TQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDL 205
           +     +      + + C    CG+++  ++H   H R H G KP+ C  +GC+R+F   
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 206 SSLKKHTKIH 215
             L +H + H
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.8 bits (127), Expect = 7e-10
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 95  HARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQI 152
                +  R   C +  C K +  S  L  H+  H G++P+ C++  C R F    +   
Sbjct: 8   PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 153 HERCH 157
           H R H
Sbjct: 68  HRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 47.4 bits (113), Expect = 6e-08
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 59  KKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKT 116
                  +    + + H+C++  C   +   +  + H R H  ++PF C +  C++ F  
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 117 SGDLSKHSAIH 127
           S +LS+H   H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 176 THKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCN 223
           +  +        ++ ++C   GC + +   S LK HT+ HT ++ F C+
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS 51

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 126 IHNGDRPYKCNYTSCGRHFRTHTQRQIHER--CHLDSKPYSCHVCGRSFISNTHKNNHLR 183
              G+  Y+C    C R +   +    H       + K Y C  C + F    +   H++
Sbjct: 4   TKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 184 IHYGL 188
           I + +
Sbjct: 62  IIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRI--HYGLKPYVCHVEGCKRKFVDLSSLKKH 211
           E        Y C VC R +   ++   H        +K Y C    C ++F    ++  H
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAH 59

Query: 212 TKIHTQ 217
            KI  +
Sbjct: 60  VKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 5/50 (10%)

Query: 183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKH--TKIHT-QQTFHCNLCNKTY 229
               G   Y C V  C R +  +S+  +H  T      + + C  C K +
Sbjct: 3   FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 56.3 bits (137), Expect = 2e-11
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHT-KIHT 216
           + + C VC R+F    H   H R H   KPY C +  C R F     L +H  KIH+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.8 bits (120), Expect = 6e-09
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHL-RIHYG 187
           R + C    C R F      + H R H + KPY C +C R+F        H  +IH G
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 9/57 (15%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFR------THTQRQIH 153
           R F C  C +AF     L +H   H  ++PY C    C R F        H Q+ IH
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQK-IH 54

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.7 bits (138), Expect = 3e-11
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 125 AIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRI 184
           +  +   P KC+   C     +    +IHER H   +P+ C+ C       ++ + H++ 
Sbjct: 2   SSGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

Query: 185 HYGLKPY 191
            +G    
Sbjct: 60  FHGDMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI 214
                  P  C  C  S  S      H RIH   +P+ C+   C       S+L KH K 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKK 59

Query: 215 HT 216
             
Sbjct: 60  FH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 97  RMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERC 156
              +   P  C  C  +  +   L  H  IH  DRP+KCNY  C    +  +    H + 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKK 59

Query: 157 H 157
            
Sbjct: 60  F 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
           H R+H   RPF C YC    K   +LSKH    +GD     
Sbjct: 28  HERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 5/58 (8%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIH---YGLKPYVCHVEGCKRKFVDLSSLKKHTKIH 215
               C +CG +       N H R H        + C  E C ++F    S+  H    
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 4e-09
 Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 5/71 (7%)

Query: 127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS---KPYSCHVCGRSFISNTHKNNHLR 183
            +G    +C    CG   R       H+R H ++     + C  CG+ F        H  
Sbjct: 2   SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 184 IHYGLKPYVCH 194
             +        
Sbjct: 60  KSHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 13/74 (17%), Positives = 18/74 (24%), Gaps = 6/74 (8%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIH---NGDRPYKCNYTSCGRHFRTHTQRQIHER-CHL 158
               C  C    +    L+ H   H        + C +  CG+ F        H    H 
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHP 63

Query: 159 DSKPYSCHVCGRSF 172
                     G S 
Sbjct: 64  ALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 6/54 (11%)

Query: 185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQT----FHCNLCNKTYKHQQS 234
             G     C +  C       +SL  H + H +      F C  C K ++   S
Sbjct: 2   SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDS 53

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 5/68 (7%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQ---RPFGCRYCDKAFKTSGDLSKHSAIHN 128
                C  E C    + +A    H R HA       F C +C K F+    ++ H +  +
Sbjct: 5   SSGLQC--EICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 129 GDRPYKCN 136
                   
Sbjct: 63  PALLLAPQ 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 53.5 bits (129), Expect = 5e-10
 Identities = 21/63 (33%), Positives = 29/63 (46%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHL 182
            + +    RPY C   SC R F    +   H R H   KP+ C +C R+F  + H   H+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 183 RIH 185
           R H
Sbjct: 70  RTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 150 RQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSS 207
              +       +PY+C V  C R F  +     H+RIH G KP+ C +  C R F     
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDH 64

Query: 208 LKKHTKIHT 216
           L  H + HT
Sbjct: 65  LTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 71  KEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
           K + + C  E C+  F    E   H R+H  Q+PF CR C + F  S  L+ H   H
Sbjct: 16  KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 176 THKNNHLRIHY--GLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCNLCNK 227
            H  N+L  +    ++PY C VE C R+F     L +H +IHT Q+ F C +C +
Sbjct: 3   PHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 57

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 95  HARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGR---------- 142
              +    RP+ C    CD+ F  S +L++H  IH G +P++C    C R          
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTT 67

Query: 143 HFRTHT 148
           H RTHT
Sbjct: 68  HIRTHT 73

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPYSC+VCG++F+ + H N HLR+H        
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   ++P+ C  C KAF  S  L++H  +H  +     +
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY CN   CG+ F        H R H        
Sbjct: 2   SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 53.6 bits (128), Expect = 1e-09
 Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 5/102 (4%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAI--HNGDRPYKCNYT-SCGRHFRTHTQRQ 151
           +  +      F C+ C  A+ T  +L+ H     H  D  ++ +                
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHL--RIHYGLKPY 191
             E      K   C  CG SF S    + H+    HY     
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 11/87 (12%), Positives = 26/87 (29%), Gaps = 4/87 (4%)

Query: 151 QIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRI--HYGLKPYVCHVEG-CKRKFVDLSS 207
           +++      +  + C  C  ++ +      H+    HY    +        +       S
Sbjct: 8   KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRS 67

Query: 208 LKKHTKIHTQQT-FHCNLCNKTYKHQQ 233
           L +       Q    C  C  +++  Q
Sbjct: 68  LLEMEGKEDAQKVLKCMYCGHSFESLQ 94

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.2 bits (88), Expect = 4e-04
 Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 9/101 (8%)

Query: 116 TSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIH-----ERCHLDSKPYSCHVCGR 170
           +      + +I  G   ++C    C   + T  +  +H          + +  + +    
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 171 SFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKH 211
           S                 K   C    C   F  L  L  H
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVH 99

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                 +  K Y C VCG+ F  ++H   H R+H G KP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++ + C  C K F  S  L  H  +H G++P   +
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++ YKC+   CG+ F   +  Q H+R H   KP   
Sbjct: 3   SGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG+SFI  +H N H RIH G KP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K+F     L++H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY CN   CG+ F   +    H R H   KP   
Sbjct: 2   SSGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                   KP+ C  CG++F  N H  +HLRIH G KP    
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++PF C+ C KAF+ +  L+ H  IH G++P   +
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
              +  +G++P+KC    CG+ FR +     H R H   KP    
Sbjct: 2   SSGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 4e-09
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C +CG+SF   +  N H  +H   KP   
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 1e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++PF C  C K+F     L++HS +H  ++P   +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++P+KC+   CG+ F   ++   H   H   KP   
Sbjct: 3   SGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +      G KP+ C +  C + F   S L +H+ +HT
Sbjct: 2   SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHT 36

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 4e-09
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                   KP+ C  CG+ F  N+H ++H R+H G KP    
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                 + ++PF C  C K F  +  L  H  +H G++P   +
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
              +  +G++P++C    CG+ F  ++    H+R H   KP    
Sbjct: 2   SSGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C VCG++F  ++H   H  +H G +P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   ++P+ C+ C KAF+ S  L +H ++H+G+RP   +
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PYKC    CG+ FR  +    H   H   +P   
Sbjct: 2   SSGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                   KPY C+ CG+ F  N+H  NH RIH G+KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F  +  L+ H  IH G +P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
              +   G++PYKCN   CG+ F  ++    H+R H   KP    
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                   K Y C+ CG+ F  N+  + H +IH G KP    
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++ + C  C K F  +  LS+H  IH G++P   +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
              +   G++ YKCN   CG+ F  ++Q   H++ H   KP    
Sbjct: 2   SSGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 5e-09
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C VC ++F    H   H + H G KP   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C+ C KAF     L++H   H G++P   +
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+C    C + F        H++ H   KP   
Sbjct: 2   SSGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 6e-09
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                    KPY C  CG+ + S  + + H ++H G +P    
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K + +  +L  H  +H G+RP   +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
              +   G++PYKC    CG+ + +     +H++ H   +P    
Sbjct: 2   SSGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 6e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   +P+ C+ CG+SFI + H   H RIH G KP   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  +RP  C  C K+F  S  L +H  IH G++P   +
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G+RP+KCN   CG+ F        H+R H   KP   
Sbjct: 3   SGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 6e-09
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG+ F  N+H  NH RIH G KP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++P+ C  C K F  +  L+ H  IH G++P   +
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G++PYKCN   CG+ F  ++    H R H   KP   
Sbjct: 3   SGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 6e-09
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG+ F  N+  ++H R+H G KP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++PF C  C K F  +  L  H  +H G++P   +
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G++P+KC    CG+ F  ++Q   H+R H   KP   
Sbjct: 3   SGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 7e-09
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG+ F +N+   +H R H G KP   
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++PF C  C K F T+     H   H+G++P   +
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G++P+KC    CG+ F T++Q   H+R H   KP   
Sbjct: 3   SGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 7e-09
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                   KPY CH CG+ F  N+H   H  IH G KP    
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.5 bits (109), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F+ +  L++H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
              +   G++PYKC+   CG+ FR ++    H+  H   KP    
Sbjct: 2   SSGSSGTGEKPYKCH--ECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 8e-09
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F  +TH N H RIH G +P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 8e-08
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++P+ C  C KAF     L++H  IH G RP   +
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +G++PYKC+   CG+ F  HT    H R H   +P   
Sbjct: 2   SSGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 50.0 bits (119), Expect = 8e-09
 Identities = 20/76 (26%), Positives = 23/76 (30%), Gaps = 9/76 (11%)

Query: 116 TSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISN 175
           +SG   K   IH GDR  KC+   CG  F       I        K   C  C +     
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCS--KCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQE 52

Query: 176 THKNNHLRIHYGLKPY 191
              N       G K  
Sbjct: 53  AALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.9 bits (90), Expect = 9e-05
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 9/72 (12%)

Query: 148 TQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSS 207
                 ++ HL  +   C  CG  FI  +  +         K  +C  E C++     ++
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMC--EKCRKDSCQEAA 54

Query: 208 LKKHTKIHTQQT 219
           L K     + + 
Sbjct: 55  LNKDEGNESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 11/76 (14%), Positives = 18/76 (23%), Gaps = 9/76 (11%)

Query: 88  TQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTH 147
           +     +  ++H   R   C  C   F     LS+        +   C    C +     
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCE--KCRKDSCQE 52

Query: 148 TQRQIHERCHLDSKPY 163
                 E      K  
Sbjct: 53  AALNKDEGNESGKKTS 68

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 8e-09
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG+ F  N+H   H R+H G KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F  +  L++H  +H G +P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PYKCN   CG+ F  ++    H R H   KP   
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 9e-09
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG+ F  N+H   H  IH G KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F  +  L++H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PYKCN   CG+ F  ++    H   H   KP   
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 9e-09
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  C ++FI   H N H R+H G +    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++P+ C+ C K F   G L++H  +H G+R    +
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +G +PY+C    C + F        H+R H   +    
Sbjct: 2   SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG+SFI  +  + H RIH G  P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K+F     L  H  IH G+ P   +
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+C+   CG+ F   +Q  +H+R H    P   
Sbjct: 2   SSGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG++F  +   N H RIH G KP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++PF C  C KAF     L++H  IH G++P   +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++P+ C    CG+ F  H     H R H   KP   
Sbjct: 2   SSGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KPY C+ CG++F   +    H R+H G KP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   +P+ C  C KAF  +  L++H  +H G++P   +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G +PY+CN   CG+ F   ++   H+R H   KP   
Sbjct: 2   SSGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG+S+    H   H R+H G KP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++PF C  C K++     L++H  +H G++P   +
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++P+KC    CG+ +        H+R H   KP   
Sbjct: 2   SSGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG+ F  N+H   H  IH G KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F  +  L +H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PYKCN   CG+ F  ++    H   H   KP   
Sbjct: 3   SGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KPY C+ CG++F   +  + H R H G KP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++P+GC  C K F     LS H   H G++P   +
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G++PY CN   CG+ F   +    H+R H   KP   
Sbjct: 3   SGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH 194
                   KPY C+ CG+ F  N++ + H RIH G KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F+ +  LS+H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH 166
             +   G++PYKCN   CG+ FR ++    H+R H   KP    
Sbjct: 3   SGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY+C  CG++FI ++    H RIH G KP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF     L +H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY C    CG+ F   +Q Q H+R H   KP   
Sbjct: 2   SSGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KP+ C  CG+SF +  +   H RIH G K    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 47.2 bits (113), Expect = 5e-08
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  Q+PF C +C K+F+  G+L  H  IH G++    +
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G +P++C    CG+ FR       H+R H   K    
Sbjct: 3   SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG+ +      + H R+H G K    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++P+ C  C K +K   DL  H  +H G++    +
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +G++PYKC    CG+ ++       H+R H   K    
Sbjct: 2   SSGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG+ F  N+H   H  IH G KP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F  +  L++H  IH G++P   +
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G +PYKCN   CG+ F  ++    H   H   KP   
Sbjct: 3   SGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KPY C +CG+SF   +  + H +IH G KP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K+F     L  H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+C+   CG+ F   +Q  +H++ H   KP   
Sbjct: 2   SSGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C VC +SF   +    H RIH G KP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 8e-08
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K+F+    L+ H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PYKC+   C + FR  +   +H+R H   KP   
Sbjct: 3   SGSSGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F    +   H RIH G KP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF    +L++H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY+C    CG+ F        H+R H   KP   
Sbjct: 3   SGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG+ FI       H  +H G KP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K F    DL  H  +H G++P   +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PYKC    CG+ F        H   H   KP   
Sbjct: 3   SGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +      G KPY C  E C + F+    L  H  +HT
Sbjct: 2   SSGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHT 36

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++F   +    H RIH G KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF  +  L++H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PYKCN   CG+ F   ++   H+R H   KP   
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F   TH   H R+H G KP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C+ C KAF  +  L +H  +H G++P   +
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+C    CG+ F   T    H+R H   KP   
Sbjct: 2   SSGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG+ F   +  N H ++H G KP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++PF C  C K F     L+ H  +H G++P   +
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++P+KC    CG+ F   +   +H + H   KP   
Sbjct: 2   SSGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHS-AIHNGDRPYKCNYTSCGRHFRT 146
                +V +P+ C+ C K F     L+ H   +H  +RP+KC          +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHL-RIHYGLKPYVCHVEGCKRKF 202
                   KPY C  CG+ F    H N H+ ++H   +P+ C V       
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGP 51

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++F ++++   H  IH G KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 9e-08
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF+   +L+ H  IH G++P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PYKCN   CG+ FR H+    H+  H   KP   
Sbjct: 3   SGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                  +K + CH CGR F   +H N H RIH G KP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +  + ++C+   CGR F   +    H+R H   KP   
Sbjct: 2   SSGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                +  +   C  C + F     L++H  IH G++P   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KPY C VC ++F  +     H R+H G KP   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF     L++H  +H+G++P   +
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY+C+   C + F  H     H+R H   KP   
Sbjct: 3   SGSSGTGEKPYECD--VCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                 G KPY C V  C++ F   +SL +H ++H+
Sbjct: 3   SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHS 36

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG+SF  ++    H RIH G KP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                  ++PF C  C K+F  S  L+ H  IH G++P   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++P++C    CG+ F   +Q   H+R H   KP   
Sbjct: 2   SSGSSGTGEKPFECA--ECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   + Y C  CG++FI  +  + H RIH G KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   +R + C  C KAF     LS H  IH G++P   +
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G+R Y+C+   CG+ F   +   +H+R H   KP   
Sbjct: 2   SSGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   +P+ C+ CG+ F   +H   HLR+H   K    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + +RPF C  C K F     L+ H  +H+ ++    +
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +G+RP+KCN   CG+ F   +    H R H   K    
Sbjct: 2   SSGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F  N+    H R+H G +P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF  +   ++H  +H G RP   +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PYKC    CG+ F  ++    H+R H   +P   
Sbjct: 3   SGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +      G KPY C    C + F D SS  +H ++HT
Sbjct: 2   SSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHT 36

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F  +     H RIH G KP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++P+ C YC KAF  S +L +H  IH G++P   +
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +G++PY C+Y  CG+ F    +   H+R H   KP   
Sbjct: 2   SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                 G KPYVC    C + F   + L +H +IHT
Sbjct: 3   SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHT 36

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG+SF   +    H + H G +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K+F     L  H   H G+R    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PYKC+   CG+ F   ++ +IH++CH   +    
Sbjct: 3   SGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                +V++P+ C  C K +    +L  H  +H G++    +
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG+ +    + + H R+H G K    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  + ++PYKC    CG+ +       +H+R H+  K    
Sbjct: 3   SGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 8e-04
 Identities = 8/37 (21%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +        KPY C    C + +    +L  H ++H 
Sbjct: 2   SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHM 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 13/39 (33%), Positives = 15/39 (38%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY 191
                   KPY C  CG  F+   H   H+ IH G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
            S    G++PYKC   +CG  F      + H   H  S P S
Sbjct: 2   SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPY 133
            +     ++P+ C  C   F     L  H  IH G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                 G KPY C  E C  +FV ++ L+ H  IHT
Sbjct: 2   SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHT 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   +PY C VCG++F   ++   H +IH G KP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  +RP+ C  C KAF    +L KH  IH G++P   +
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G+RPY C    CG+ F   +    H++ H   KP   
Sbjct: 3   SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                 G +PY+C V  C + F D S+L KH KIHT
Sbjct: 3   SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHT 36

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++F   +    H  IH G KP   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   +P+ C  C KAF     L+ H  IH G++P   +
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G +PY CN   CG+ F  ++    H+  H   KP   
Sbjct: 2   SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   K + C  CG++F   +  + H +IH G KP   
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   + F C  C KAF     LS H  IH G++P   +
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 121 SKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
               +   G + ++C    CG+ F   +   +H++ H   KP   
Sbjct: 1   GSSGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F S ++   H+R H G KP   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                A ++P+GC  C KAF +   L  H   H+G++P   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY C+   CG+ F + +   IH R H   KP   
Sbjct: 3   SGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F   ++   H +IH G KP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                  ++P+ C  C KAF    +L  H  IH G++P   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY+C    CG+ F   +    H++ H   KP   
Sbjct: 3   SGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG+SF  N+    H RIH G  P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P  CR C K+F  +  L  H  IH G+ P   +
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++P++C    CG+ F  ++Q  +H+R H    P   
Sbjct: 2   SSGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++F   +    H  IH G KP   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF     L+ H AIH G +P   +
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+CN   CG+ F   +    H+  H   KP   
Sbjct: 2   SSGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   K Y+C  CG+SF        H R+H G KP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++ + C+ C K+F  +  L KH  +H+G++P   +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++ Y C    CG+ F        HER H   KP   
Sbjct: 3   SGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F   +  + H + H G +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF     L  H   H G+R    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PYKC+   CG+ F   +   IH++ H   +    
Sbjct: 2   SSGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    P+ C  CG+ F   T+   H +IH G +P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  + PF C  C K F    +L  H  IH G+RP   +
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 8e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G+ P+ C+   CG+ F   T   IH++ H   +P   
Sbjct: 3   SGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   K + C+ C ++F  ++    H RIH G KP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                A ++ F C  C K F  S  L+ H  IH G++P   +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G + +KCN   C + F   +   +H+R H   KP   
Sbjct: 3   SGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 4e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY+C  CG+SF   +    H R+H G KP   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 46.8 bits (112), Expect = 7e-08
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C+ C K+F+ +  L KH  +H+G++P   +
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY C    CG+ FR  +    H+R H   KP   
Sbjct: 3   SGSSGTGEKPYNCK--ECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 4e-08
 Identities = 12/41 (29%), Positives = 14/41 (34%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG+SF  +     H   H   KP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C K+F  S  L++H   H  ++P   +
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+C+   CG+ F    +   H   H   KP   
Sbjct: 2   SSGSSGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  CG++F   ++   H +IH   KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 9e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF    +L KH  IH   +P   +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY C    CG+ F   +    H++ H   KP   
Sbjct: 3   SGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +      G KPY+C    C + F   S+L KH KIHT
Sbjct: 2   SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHT 36

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++F S ++   H R H G      
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G +PY CN   CG+ FR+ +   IH R H      S 
Sbjct: 2   SSGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                   +P+ C  C KAF++   L  H+  H G+     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   +PY C+ CG++F  ++H   HL+ H+  K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + +RP+GC  C K F     L +H   H  ++    +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G+RPY CN   CG++F  H+    H + H   K    
Sbjct: 3   SGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KPY C VCG++F      + H RIH G KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF     LS H  IH+G +P   +
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PY+C+   CG+ F       +H+R H   KP   
Sbjct: 2   SSGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    KPY C+ C ++F + ++   H R H G      
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++PY+CN   C + F T +   +H+R H      S 
Sbjct: 3   SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                  ++P+ C  C KAF T  +L  H   H G+     
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 6e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   +PY C  CG++F + +    H R H G KP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  QRP+ C  C KAFKT   L  H   H G++P   +
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G RPY+C    CG+ F+T +    H R H   KP   
Sbjct: 2   SSGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.8 bits (112), Expect = 6e-08
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLR-IHYGLKPYVC 193
                   KPY C  CG++FI NT    H R  H G KP   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHS-AIHNGDRPYKCN 136
                  ++P+ C  C KAF  +  L +H    H G++P   +
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 7e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++F + +    H   H G KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P+ C  C KAF+    L+ H A H+G++P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G++PYKCN   CG+ FR  +   IH+  H   KP   
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   + Y C  CG++F   +    H RIH G KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   +R + C  C KAF     L  H  IH G++P   +
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 8e-06
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G+R Y+C+   CG+ F   +   +H+R H   KP   
Sbjct: 2   SSGSSGTGERHYECS--ECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.8 bits (112), Expect = 8e-08
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C  C ++F   +    H R H G+KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                   +P+GC  C K F     L  H   H G +P   +
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G +PY C+   C + F   +Q  +H+R H   KP   
Sbjct: 2   SSGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 8e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  C ++F + ++   H R H G KP   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 1e-06
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                  ++PF C  C KAF T  +L  H   H G++P   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++P++C+   C + F T +   +H+R H   KP   
Sbjct: 3   SGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 8e-08
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    PY CH CG++F       +H R H G KP   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  + P+ C  C KAF     L  H   H G++P   +
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G+ PY+C+   CG+ F    Q   H+R H   KP   
Sbjct: 3   SGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                A   P+ C  C+K+F     L  H  +H  ++P   +
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 11/41 (26%), Positives = 13/41 (31%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    PY C  C +SF        H R+H   KP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G  PYKC+   C + F    +  +H+R H   KP   
Sbjct: 3   SGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   + + C  CG+ F+  ++   H RIH G KP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  +R   C  C K F  + +  +H  IH G++P   +
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +  +G+R ++C+   CG+ F   +    H R H   KP   
Sbjct: 2   SSGSSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++ + CR CD  F  +  L  H  +H G++P   +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 9/41 (21%), Positives = 13/41 (31%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                +  K + C  C   F   +    H  +H G KP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++ +KC    C   F   +  ++H+  H+  KP   
Sbjct: 3   SGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/39 (35%), Positives = 16/39 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY 191
                   KPY C +CG  F       +HLRIH G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
            S    G++PY C    CG  FR     + H R H  S P S
Sbjct: 2   SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/39 (25%), Positives = 15/39 (38%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPY 133
            +     ++P+ C  C   F+    L  H  IH G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                 G KPY C +  C  +F  L +LK H +IHT
Sbjct: 2   SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHT 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 10/41 (24%), Positives = 13/41 (31%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP  C  CG++F   +    H R H   K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++P  C  C KAF     L  H   H  D+    +
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++P KC    CG+ F   +Q  +H+R H+D K    
Sbjct: 3   SGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY 191
                   KPY C  CG++F        H+R+H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
            S    G++PY+C+   CG+ F       +H R H  S P S
Sbjct: 2   SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPY 133
            +     ++P+ C  C KAF   G L  H  +H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT-QQTFHCN 223
           +      G KP+ C   GC  +F     L +H + H+  +    +
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 44.6 bits (106), Expect = 4e-07
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 95  HARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                  ++PF C +  C   F  S +LS+H   H+G +P   +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++P+ C +  CG  F    +   H R H   KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 41.1 bits (97), Expect = 8e-06
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 153 HERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP++C    CG  F  +   + H R H G+KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KPY C+ CG++FI  +    H R H G+     
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G++PY+CN   CG+ F   +   +HER H      S 
Sbjct: 3   SGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                + ++P+ C  C KAF     L  H   H G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
           KP+ C  C ++F S ++   H + H   KP   
Sbjct: 9   KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 99  HAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
            + ++PFGC  C+KAF +   L  H   H  ++P   +
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
           S+  +G++P+ C+   C + F + +   +H++ H + KP   
Sbjct: 2   SSGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 23/97 (23%)

Query: 98  MHAVQRPFGCRYCDKAFKTSGDLSKH-SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERC 156
           +   Q     + CD+ F T  +L  H +  H G      +                   C
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV------------------C 60

Query: 157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
           + +     C   G+SF +     NH+R+H G K    
Sbjct: 61  YWEE----CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 157 HLDSKPYSCHVCGRSFISNTHKNNHL-RIHYGLKP---YVCHVEGCKRK---FVDLSSLK 209
                      C R+F +      H+   H G      +VC+ E C R+   F     L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 210 KHTKIHT 216
            H ++HT
Sbjct: 80  NHIRVHT 86

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 10/40 (25%), Positives = 13/40 (32%)

Query: 154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   PY C  CG++F       +H R H G      
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 97  RMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
              + + P+ C  C KAF     L  H   H G+     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
           S+  +G+ PY+C+   CG+ F    Q   H+R H      S 
Sbjct: 2   SSGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 9/41 (21%), Positives = 12/41 (29%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                    PY C  CG+ F       +H + H G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 9/41 (21%), Positives = 12/41 (29%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                  + P+ C  C K F     L  H   H+G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
              +   G+ PY+C    CG+ F    Q   H++ H      S 
Sbjct: 2   SSGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                  ++PF C+ C   F  S  L KH   H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   KP+ C  CG +F  +     HLR H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +   G++P++C    CG +F        H R H  + P   
Sbjct: 3   SGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 41.9 bits (99), Expect = 4e-06
 Identities = 10/39 (25%), Positives = 11/39 (28%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY 191
                    PY C  CG+SF        H R      P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 9/40 (22%), Positives = 15/40 (37%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYK 134
            +     + P+ C  C K+F   G L+ H    +   P  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
            S    G+ PY C    CG+ F       +H+R    S P S
Sbjct: 2   SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 41.5 bits (97), Expect = 5e-06
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 96  ARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTS 139
                 ++   C  C K F+    L++H   H+G++PY    +S
Sbjct: 4   GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
           K  +C +CG+ F    H N H   H G KPY  
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPY 191
           + Y C  CG+SF        H RIH G  P 
Sbjct: 9   RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS 164
           S+  +G R Y+C    CG+ FR      +HER H  S P S
Sbjct: 2   SSGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 96  ARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPY 133
           +   + QR + C+ C K+F+  G L+ H  IH G  P 
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                   K ++C  CG++F   +    H R+H G K    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
             +  +G++ + C+   CG++F   +  +IH+R H+  K    
Sbjct: 3   SGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCN 136
                + ++   C  C K F     L  H  +H G++    +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
                 DSK Y+C+ CG++F    H   H +IH        
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 13/42 (30%)

Query: 94  EHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKC 135
                    + + C  C KAF     L++H  IH        
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 1e-05
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 163 YSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           Y C  CG      +    H+R H  ++PY C    C   F    +L KH K   
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           Y C    CG   +  +  + H R H D +PY C  C  SF +  +   H++     K
Sbjct: 2   YICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 107 CRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSK 161
           C  C    K    L KH   H   RPY C    C   F+T      H +    SK
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAHSK 56

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 93  EEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQI 152
              A     +  + CR C+    +  +   H  +        C Y  C   F +   +Q 
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQE 60

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNH 181
           HE    + K  +C  C R+F S+     H
Sbjct: 61  HES-KCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 159 DSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ 218
           + + Y C +C     S   + +H R+       VC    C  +F      ++H      +
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVC--PYCSLRFFSPELKQEHESKCEYK 68

Query: 219 TFHCNLCNKTYKHQQSI 235
              C  C +T+K   SI
Sbjct: 69  KLTCLECMRTFKSSFSI 85

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSF-ISNTHKNNHL 182
           S + +G + Y  N+     H      ++ H+      +     V           ++++L
Sbjct: 4   SDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63

Query: 183 RIHYGLK---PYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCNKTYKHQQSIL 236
                 K    +VC +  C   F    SLK+H +     T  C +C K +    S L
Sbjct: 64  YRLLASKAISQFVCPL--CLMPFSSSVSLKQHIRYTE-HTKVCPVCKKEFTSTDSAL 117

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.0 bits (87), Expect = 5e-04
 Identities = 16/94 (17%), Positives = 25/94 (26%), Gaps = 6/94 (6%)

Query: 120 LSKHSAIHNGDRPYKCNYTSCGR--HFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTH 177
              H       R  +    +          +              + C +C   F S+  
Sbjct: 30  KRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVS 89

Query: 178 KNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKH 211
              H+R        VC V  CK++F    S   H
Sbjct: 90  LKQHIRYT--EHTKVCPV--CKKEFTSTDSALDH 119

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
           KPYSC  C  +F  N     H ++H        
Sbjct: 9   KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
             R     KP+ C  C RSF  + H   H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.0 bits (81), Expect = 9e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
             R     +PF C  CD++F  S  L+ H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	236
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.73
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.7
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.66
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.65
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.63
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.59
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.56
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.53
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.53
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.51
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.48
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.46
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.44
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.43
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.43
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.42
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.41
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.4
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.37
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.37
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.33
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.32
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.3
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.28
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.28
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.28
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.26
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.2
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.19
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.19
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.19
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.17
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.17
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.17
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.14
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.14
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.1
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.07
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.03
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.03
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.01
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.01
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.0
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.96
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.88
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.87
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.86
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.86
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.79
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.78
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.78
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.76
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.75
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.75
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.74
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.73
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.63
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.63
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.59
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.54
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.51
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.48
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.47
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.44
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.43
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.42
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.42
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.41
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.4
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.39
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.37
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.35
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.32
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.29
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.28
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.59
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.26
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.52
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.21
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.2
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.2
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.17
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.12
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.1
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.37
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.04
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.28
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.25
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.21
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.94
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.84
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.37
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.33
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.3
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.26
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.18
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.39
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.33
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.8
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.64
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.08
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.01
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.16
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	81.15
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	81.04
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	80.34
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	80.33

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.7e-38  Score=232.89  Aligned_cols=181  Identities=29%  Similarity=0.598  Sum_probs=102.7

Q ss_pred             CCCCCcccccc-hhhHHhhhhhHHHHhhhhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCcc
Q psy9360          34 GFNQNTRTASN-DIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDK  112 (236)
Q Consensus        34 ~~~~h~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  112 (236)
                      .+..|...+.. ..+.|..|+..|.....|..|++.+.++++|.|  ..|++.|.....|..|++.|.++++|.|.+|++
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKC--PECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEEC--TTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccC--CCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            34444443332 356666666666666666666666666666666  666666666666666666666666666666666


Q ss_pred             ccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCee
Q psy9360         113 AFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYV  192 (236)
Q Consensus       113 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  192 (236)
                      .|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|++++||.
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  163 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK  163 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeE
Confidence            666666666666666666666666  466666666666666666666666666666666666666666666666666666


Q ss_pred             ccccccccccCChhhHHHHHHhhcC-Ccc
Q psy9360         193 CHVEGCKRKFVDLSSLKKHTKIHTQ-QTF  220 (236)
Q Consensus       193 C~~~~C~~~f~~~~~l~~H~~~h~~-~~~  220 (236)
                      |++  |++.|.....|.+|+++|++ +||
T Consensus       164 C~~--C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          164 CPE--CGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             CTT--TCCEESSHHHHHHHHTTC------
T ss_pred             CCC--CCCccCCHHHHHHHHHhcCCCCCC
Confidence            654  66666666666666666666 443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=8.3e-38  Score=230.31  Aligned_cols=171  Identities=33%  Similarity=0.750  Sum_probs=139.1

Q ss_pred             hhhhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccC
Q psy9360          59 KKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYT  138 (236)
Q Consensus        59 ~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~  138 (236)
                      ...+..|+..+.++++|.|  ..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|.++++|.|+  
T Consensus         6 ~~~l~~h~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--   81 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP--   81 (190)
T ss_dssp             ---------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT--
T ss_pred             hccchhhhhhcCCCCCCcC--CCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCc--
Confidence            4567778888999999999  999999999999999999999999999999999999999999999999999999999  


Q ss_pred             cccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-
Q psy9360         139 SCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-  217 (236)
Q Consensus       139 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-  217 (236)
                      .|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|+++|++++||.|++  |++.|.....|..|+++|++ 
T Consensus        82 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  159 (190)
T 2i13_A           82 ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGE  159 (190)
T ss_dssp             TTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCC
T ss_pred             ccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CCcccCCHHHHHHHHHhcCCC
Confidence            699999999999999999999999999999999999999999999999999999976  99999999999999999998 


Q ss_pred             CcccCCccccccCccCCC
Q psy9360         218 QTFHCNLCNKTYKHQQSI  235 (236)
Q Consensus       218 ~~~~C~~C~~~f~~~~~L  235 (236)
                      ++|.|+.||+.|.+...|
T Consensus       160 ~~~~C~~C~~~f~~~~~L  177 (190)
T 2i13_A          160 KPYKCPECGKSFSRRDAL  177 (190)
T ss_dssp             CCEECTTTCCEESSHHHH
T ss_pred             CCeECCCCCCccCCHHHH
Confidence            999999999999988765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=4.1e-34  Score=210.55  Aligned_cols=165  Identities=28%  Similarity=0.608  Sum_probs=145.6

Q ss_pred             hccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCccc--ccCccccCCchhHHhhhhhhcCCCCcccccCcccccccc
Q psy9360          69 FEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGC--RYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRT  146 (236)
Q Consensus        69 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  146 (236)
                      ....++|.|.|..|++.|.....|..|++.|.++++|.|  ..|++.|.....|..|+++|.++++|.|..+.|++.|..
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            445678999777899999999999999999999999999  889999999999999999999999999984349999999


Q ss_pred             hhhHHHhH-hhc-CCCCCeec--ccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcCCcccC
Q psy9360         147 HTQRQIHE-RCH-LDSKPYSC--HVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHC  222 (236)
Q Consensus       147 ~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C  222 (236)
                      ...|..|+ +.| .+.++|.|  +.|++.|.+...|..|+++|++++||.|+++.|++.|.....|.+|+++|++  |.|
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C  164 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPC  164 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCC
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcC
Confidence            99999998 566 46788999  8899999999999999999999999999433499999999999999999987  889


Q ss_pred             Cc---cccccCccCCC
Q psy9360         223 NL---CNKTYKHQQSI  235 (236)
Q Consensus       223 ~~---C~~~f~~~~~L  235 (236)
                      ..   |++.|.+...|
T Consensus       165 ~~~~~C~~~f~~~~~l  180 (190)
T 1tf6_A          165 KKDDSCSFVGKTWTLY  180 (190)
T ss_dssp             CSTTTCCCCCSCHHHH
T ss_pred             CCCCcCCCccccHHHH
Confidence            99   99999987655

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=3.2e-32  Score=200.37  Aligned_cols=154  Identities=27%  Similarity=0.513  Sum_probs=140.3

Q ss_pred             hhhhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccc--cCccccCCchhHHhhh-hhh-cCCCCcc
Q psy9360          59 KKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCR--YCDKAFKTSGDLSKHS-AIH-NGDRPYK  134 (236)
Q Consensus        59 ~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~  134 (236)
                      ...|..|++.|.++++|.|++..|++.|.....|..|+++|.++++|.|.  .|++.|.+...|..|+ ..| .++++|.
T Consensus        27 ~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  106 (190)
T 1tf6_A           27 NWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYV  106 (190)
T ss_dssp             HHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCE
T ss_pred             HHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceee
Confidence            45667788888889999997778999999999999999999999999999  8999999999999999 666 4678999


Q ss_pred             cccCcccccccchhhHHHhHhhcCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeeccccc---cccccCChhhHH
Q psy9360         135 CNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEG---CKRKFVDLSSLK  209 (236)
Q Consensus       135 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~---C~~~f~~~~~l~  209 (236)
                      |++..|++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++   |.|  ..   |++.|.....|.
T Consensus       107 C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C--~~~~~C~~~f~~~~~l~  181 (190)
T 1tf6_A          107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC--KKDDSCSFVGKTWTLYL  181 (190)
T ss_dssp             ECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCC--CSTTTCCCCCSCHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcC--CCCCcCCCccccHHHHH
Confidence            932279999999999999999999999999988  99999999999999999988   888  56   999999999999


Q ss_pred             HHHHhhcC
Q psy9360         210 KHTKIHTQ  217 (236)
Q Consensus       210 ~H~~~h~~  217 (236)
                      +|+++|++
T Consensus       182 ~H~~~h~~  189 (190)
T 1tf6_A          182 KHVAECHQ  189 (190)
T ss_dssp             HHHTTCC-
T ss_pred             HHHHhhcC
Confidence            99999975

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=1e-29  Score=180.98  Aligned_cols=142  Identities=30%  Similarity=0.656  Sum_probs=130.4

Q ss_pred             ceeecCCCCCcccCChHHHHHHHh---hcCCCCCcccccC-----ccccCCchhHHhhhhhhcCCCCcccccCccccccc
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHAR---MHAVQRPFGCRYC-----DKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFR  145 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  145 (236)
                      +|.|  ..|++.|.+...|..|++   +|.++++|.|..|     ++.|.....|..|++.|.++++|.|++..|++.|.
T Consensus         3 ~~~C--~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            3 DCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             BCCB--TTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             cCCc--CCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            4556  999999999999999998   6888899988753     49999999999999999999999998546999999


Q ss_pred             chhhHHHhHhhcCCCCCeeccc--ccccccCchHHHhHH-HHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         146 THTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHL-RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       146 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ....|..|+++|.++++|.|++  |++.|.+...|..|+ ++|+++++|.|+++.|++.|.....|.+|+++|+|
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999999999999999998  999999999999999 89999999999544499999999999999999975

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=8.4e-28  Score=171.03  Aligned_cols=134  Identities=30%  Similarity=0.641  Sum_probs=121.9

Q ss_pred             CCCcccccCccccCCchhHHhhhh---hhcCCCCcccccCc---ccccccchhhHHHhHhhcCCCCCeeccc--cccccc
Q psy9360         102 QRPFGCRYCDKAFKTSGDLSKHSA---IHNGDRPYKCNYTS---CGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFI  173 (236)
Q Consensus       102 ~~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~~~---C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~  173 (236)
                      +.++.|..|++.|.+...|..|++   +|.++++|.|++..   |++.|.....|..|++.|.++++|.|+.  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            357899999999999999999998   68889999997423   4599999999999999999999999985  999999


Q ss_pred             CchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHH-HhhcC-CcccCCc--cccccCccCCC
Q psy9360         174 SNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHT-KIHTQ-QTFHCNL--CNKTYKHQQSI  235 (236)
Q Consensus       174 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~-~~~~C~~--C~~~f~~~~~L  235 (236)
                      ....|..|+++|+++++|.|+++.|++.|.....|.+|+ ++|.+ ++|.|+.  ||+.|.+.+.|
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L  146 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL  146 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHH
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHH
Confidence            999999999999999999995335999999999999999 78988 9999998  99999988765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=1.7e-26  Score=157.01  Aligned_cols=114  Identities=37%  Similarity=0.851  Sum_probs=98.4

Q ss_pred             CCCCCccccc--CccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchH
Q psy9360         100 AVQRPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTH  177 (236)
Q Consensus       100 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  177 (236)
                      .++++|.|..  |++.|.....|..|++.|.++++|.|+++.|++.|.....|..|+++|.++++|.|++|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4567888886  88888888888888888888888888744589999888899999888888889999999999999999


Q ss_pred             HHhHHHHhcCCCCeec--cccccccccCChhhHHHHHHhh
Q psy9360         178 KNNHLRIHYGLKPYVC--HVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       178 l~~H~~~h~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      |..|+++|+++++|.|  ++  |++.|.....|.+|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPS--CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTT--CCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCC--CccccCCHHHHHHHHhcC
Confidence            9999999999999999  55  999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=7.9e-26  Score=154.80  Aligned_cols=117  Identities=28%  Similarity=0.675  Sum_probs=55.5

Q ss_pred             CceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHH
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQI  152 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~  152 (236)
                      ++|.|++..|++.|.+...|..|++.| ++++|.|.+|++.|.....|..|++.|.++++|.|.+..|++.|.....|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            345553225555555555555555555 4455555555555555555555555555555555542224444444444444


Q ss_pred             hHhhcCCCCCeecc--cccccccCchHHHhHHHHhcCCCC
Q psy9360         153 HERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       153 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  190 (236)
                      |+++|.++++|.|+  .|++.|.+...|..|+++|+++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            44444444444442  244444444444444444444443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=2.1e-26  Score=158.79  Aligned_cols=108  Identities=23%  Similarity=0.428  Sum_probs=91.1

Q ss_pred             HhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecccccccc
Q psy9360         121 SKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKR  200 (236)
Q Consensus       121 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  200 (236)
                      ..|..+|.|+++|.|+  .|++.|.....|..|+++|.+++||.|++|++.|.....|..|+++|++++||.|++  |++
T Consensus        11 ~h~~~~h~Gek~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k   86 (133)
T 2lt7_A           11 DHYELIVDGRVYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGK   86 (133)
T ss_dssp             SEEEEEETTEEEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS--SCC
T ss_pred             hhceeecCCCcCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCC--CCC
Confidence            3456678888888988  699999888889999888888888999999999999889999999998888999965  999


Q ss_pred             ccCChhhHHHHHHhhcC-------CcccCCccccccCcc
Q psy9360         201 KFVDLSSLKKHTKIHTQ-------QTFHCNLCNKTYKHQ  232 (236)
Q Consensus       201 ~f~~~~~l~~H~~~h~~-------~~~~C~~C~~~f~~~  232 (236)
                      .|...+.|..|+++|++       ++|+|..|++.|...
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999999888764       358899999888654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=1.5e-25  Score=153.35  Aligned_cols=117  Identities=33%  Similarity=0.741  Sum_probs=104.9

Q ss_pred             CCCCcccc--cCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeeccc--ccccccCch
Q psy9360         101 VQRPFGCR--YCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNT  176 (236)
Q Consensus       101 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~  176 (236)
                      .+++|.|+  .|++.|.+...|..|++.| ++++|.|.  .|++.|.....|..|+++|.++++|.|..  |++.|....
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECT--TTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            35689999  8999999999999999998 88999999  69999999999999999999999999986  999999999


Q ss_pred             HHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-Ccc
Q psy9360         177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTF  220 (236)
Q Consensus       177 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~  220 (236)
                      .|..|+++|+++++|.|+++.|++.|.....|.+|+++|++ +++
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            99999999999999999533599999999999999999998 664

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=1e-25  Score=160.24  Aligned_cols=89  Identities=34%  Similarity=0.686  Sum_probs=64.2

Q ss_pred             cccccCcccccccchhhHHHhHhhcCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHH
Q psy9360         133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKK  210 (236)
Q Consensus       133 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~  210 (236)
                      |.|.  .|++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|+++++|.|.+++|++.|.....|.+
T Consensus        63 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCT--TSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCC--CcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHH
Confidence            5666  57777777777777777777777777776  7777777777777777777777777743347777777777777


Q ss_pred             HHHhhcC-CcccCC
Q psy9360         211 HTKIHTQ-QTFHCN  223 (236)
Q Consensus       211 H~~~h~~-~~~~C~  223 (236)
                      |+++|++ ++|+|+
T Consensus       141 H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          141 HMHVHTSDKSGPSS  154 (155)
T ss_dssp             SSTTTTSCCCSCSC
T ss_pred             HHHHhcCCCCCCCC
Confidence            7777776 777765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=9.4e-25  Score=149.37  Aligned_cols=114  Identities=25%  Similarity=0.571  Sum_probs=92.8

Q ss_pred             CCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhh---cCCCCCeecccccccccCch
Q psy9360         100 AVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERC---HLDSKPYSCHVCGRSFISNT  176 (236)
Q Consensus       100 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~  176 (236)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+..   +.++++|.|++|++.|....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECC--CCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHH
Confidence            3566777888888888778888887777777788887  588888888888888774   46778899999999999999


Q ss_pred             HHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHh-hcC
Q psy9360         177 HKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI-HTQ  217 (236)
Q Consensus       177 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~  217 (236)
                      .|..|+++|++++||.|++  |++.|.....|.+|++. |.+
T Consensus        81 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           81 ELRLHMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHHSSSCSEECSS--SCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHcCCCCCccCCC--ccchhCCHHHHHHHHHHHCCC
Confidence            9999999999889999966  99999999999999874 543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=1.8e-25  Score=154.16  Aligned_cols=89  Identities=25%  Similarity=0.561  Sum_probs=44.0

Q ss_pred             hhhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccc
Q psy9360          67 KIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRT  146 (236)
Q Consensus        67 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  146 (236)
                      .++.|+++|.|  .+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|.++++|.|+  .|++.|..
T Consensus        15 ~~h~Gek~y~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~   90 (133)
T 2lt7_A           15 LIVDGRVYYIC--IVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL--ACGKSFIN   90 (133)
T ss_dssp             EEETTEEEEEE--TTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEES--SSCCEESS
T ss_pred             eecCCCcCeEC--CCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCC--CCCCCcCC
Confidence            34444455555  455555555555555555555555555555555555555555554444444444444  34444444


Q ss_pred             hhhHHHhHhhcCC
Q psy9360         147 HTQRQIHERCHLD  159 (236)
Q Consensus       147 ~~~l~~H~~~h~~  159 (236)
                      ...|..|+++|++
T Consensus        91 ~~~L~~H~~~hh~  103 (133)
T 2lt7_A           91 YQFMSSHIKSVHS  103 (133)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHhHHhcC
Confidence            4444444444443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=1.2e-24  Score=154.60  Aligned_cols=123  Identities=28%  Similarity=0.584  Sum_probs=113.2

Q ss_pred             ccCCceeecCCCCCcccCChHHHHHHHhh-cCCCCC--------cccccCccccCCchhHHhhhhhhcCCCCcccccCcc
Q psy9360          70 EKEKLHVCTYEDCNSVFQTQAEWEEHARM-HAVQRP--------FGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSC  140 (236)
Q Consensus        70 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  140 (236)
                      ..+..|.|  ..|++.|.....|..|++. |.++.+        |.|.+|++.|.....|..|++.|.++++|.|.++.|
T Consensus        21 ~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           21 EAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             TTCCSSSC--CCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             hhhccccc--ccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            34567888  9999999999999999997 666554        899999999999999999999999999999983349


Q ss_pred             cccccchhhHHHhHhhcCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         141 GRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       141 ~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      ++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999999997  999999999999999999999999983

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=2e-24  Score=146.65  Aligned_cols=114  Identities=28%  Similarity=0.727  Sum_probs=107.0

Q ss_pred             ccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccc--cCccccCCchhHHhhhhhhcCCCCcccccCcccccccch
Q psy9360          70 EKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCR--YCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTH  147 (236)
Q Consensus        70 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  147 (236)
                      .++++|.|..+.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|+++++|.|.  .|++.|...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCH
Confidence            456789993334999999999999999999999999999  7999999999999999999999999999  699999999


Q ss_pred             hhHHHhHhhcCCCCCeec--ccccccccCchHHHhHHHHh
Q psy9360         148 TQRQIHERCHLDSKPYSC--HVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       148 ~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  185 (236)
                      ..|..|+++|.++++|.|  +.|++.|.+...|..|+++|
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999  89999999999999999876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=1.3e-23  Score=143.60  Aligned_cols=115  Identities=24%  Similarity=0.572  Sum_probs=107.3

Q ss_pred             ccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhhhhh---hcCCCCcccccCcccccccc
Q psy9360          70 EKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAI---HNGDRPYKCNYTSCGRHFRT  146 (236)
Q Consensus        70 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~~~C~~~f~~  146 (236)
                      .++++|.|  ..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+..   +.++++|.|+  .|++.|..
T Consensus         3 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~   78 (124)
T 2dlq_A            3 SGSSGVEC--PTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRR   78 (124)
T ss_dssp             CCCSSCCC--TTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS--SSCCEESS
T ss_pred             CCCCCCCC--CCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC--CCCCccCC
Confidence            45678999  99999999999999999999999999999999999999999999985   5788999999  69999999


Q ss_pred             hhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHH-hcCC
Q psy9360         147 HTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRI-HYGL  188 (236)
Q Consensus       147 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~  188 (236)
                      ...|..|+++|.++++|.|++|++.|.....|..|++. |.++
T Consensus        79 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           79 RMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999999999999999999999985 5554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=6.2e-21  Score=122.82  Aligned_cols=87  Identities=40%  Similarity=0.832  Sum_probs=74.3

Q ss_pred             CCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhH
Q psy9360         129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSL  208 (236)
Q Consensus       129 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l  208 (236)
                      ++++|.|++..|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+  |++.|.....|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHHHH
Confidence            3577888744588999888889999888888888999999999999999999999999889999966  99999999999


Q ss_pred             HHHHHhhcC
Q psy9360         209 KKHTKIHTQ  217 (236)
Q Consensus       209 ~~H~~~h~~  217 (236)
                      .+|+++|++
T Consensus        79 ~~H~~~H~~   87 (90)
T 1a1h_A           79 KRHTKIHLR   87 (90)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhcc
Confidence            999998876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=2.1e-21  Score=130.93  Aligned_cols=104  Identities=14%  Similarity=0.212  Sum_probs=87.5

Q ss_pred             CchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhh--cCCCCCee-cccccccc--cCchHHHhHHHHhcCCCC
Q psy9360         116 TSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERC--HLDSKPYS-CHVCGRSF--ISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       116 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~  190 (236)
                      +...|..|+++|.++++|.|.  .|++.|.....|..|+++  |.+.+++. |++|++.|  .....|..|+++|++++|
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             cchhhhhheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc
Confidence            345688899899999999998  699999999999999988  76666554 99999988  888899999999999999


Q ss_pred             eeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      |.|.+  |++.|.....|.+|+++|+. .....+
T Consensus        81 ~~C~~--C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           81 LKCMY--CGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             eECCC--CCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            99966  99999999999999998876 554443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=4.2e-20  Score=122.65  Aligned_cols=89  Identities=34%  Similarity=0.745  Sum_probs=58.3

Q ss_pred             CCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhH
Q psy9360         129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSL  208 (236)
Q Consensus       129 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l  208 (236)
                      .+++|.|.  .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++++|.|.+  |++.|.....|
T Consensus        14 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L   89 (106)
T 2ee8_A           14 TKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSHHHH
T ss_pred             CCcCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCHHHH
Confidence            45566666  466666666666666666666666666666666666666666666666666666654  66666666666


Q ss_pred             HHHHHhhcC-Cccc
Q psy9360         209 KKHTKIHTQ-QTFH  221 (236)
Q Consensus       209 ~~H~~~h~~-~~~~  221 (236)
                      .+|+++|.+ ++|.
T Consensus        90 ~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           90 AVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHTTSCCCCC
T ss_pred             HHHHHHhCCCCCCc
Confidence            666666666 5554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=4.6e-20  Score=122.41  Aligned_cols=91  Identities=27%  Similarity=0.660  Sum_probs=62.1

Q ss_pred             CCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHh
Q psy9360         101 VQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNN  180 (236)
Q Consensus       101 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  180 (236)
                      .+++|.|.+|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            345566666666666666666666666666666676  477777777777777777777777777777777777777777


Q ss_pred             HHHHhcCCCCeec
Q psy9360         181 HLRIHYGLKPYVC  193 (236)
Q Consensus       181 H~~~h~~~~~~~C  193 (236)
                      |+++|++++||..
T Consensus        92 H~~~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCCcC
Confidence            7777777766654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=7.5e-20  Score=119.17  Aligned_cols=86  Identities=34%  Similarity=0.723  Sum_probs=67.8

Q ss_pred             cCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhh
Q psy9360         128 NGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSS  207 (236)
Q Consensus       128 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  207 (236)
                      .++++|.|.  .|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|.+  |++.|.....
T Consensus         4 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~   79 (96)
T 2dmd_A            4 GSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHH
T ss_pred             CCCcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHH
Confidence            456677777  588888777778888777777778888888888888888888888888888888865  8888888888


Q ss_pred             HHHHHHhhcC
Q psy9360         208 LKKHTKIHTQ  217 (236)
Q Consensus       208 l~~H~~~h~~  217 (236)
                      |..|+++|++
T Consensus        80 l~~H~~~h~~   89 (96)
T 2dmd_A           80 LTVHLRSHTG   89 (96)
T ss_dssp             HHHHHTTCCS
T ss_pred             HHHHHHHhcC
Confidence            8888888776

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.81  E-value=4.6e-20  Score=116.54  Aligned_cols=82  Identities=34%  Similarity=0.766  Sum_probs=71.9

Q ss_pred             CcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHH
Q psy9360         132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKH  211 (236)
Q Consensus       132 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H  211 (236)
                      ||.|.  .|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHH
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHH
Confidence            47788  689999888899999888888889999999999999999999999999999999966  99999999999999


Q ss_pred             HHhhcC
Q psy9360         212 TKIHTQ  217 (236)
Q Consensus       212 ~~~h~~  217 (236)
                      +++|+|
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            998874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=7.9e-20  Score=119.06  Aligned_cols=89  Identities=29%  Similarity=0.618  Sum_probs=70.7

Q ss_pred             CCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHH
Q psy9360         100 AVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKN  179 (236)
Q Consensus       100 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  179 (236)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|.
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            4567777888888888777788887777777788887  58888888888888888888888888888888888888888


Q ss_pred             hHHHHhcCCCC
Q psy9360         180 NHLRIHYGLKP  190 (236)
Q Consensus       180 ~H~~~h~~~~~  190 (236)
                      .|+++|+++++
T Consensus        82 ~H~~~h~~~~~   92 (96)
T 2dmd_A           82 VHLRSHTGDSG   92 (96)
T ss_dssp             HHHTTCCSCCC
T ss_pred             HHHHHhcCCCC
Confidence            88888877654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=4.4e-20  Score=122.76  Aligned_cols=95  Identities=22%  Similarity=0.396  Sum_probs=76.6

Q ss_pred             hhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccc
Q psy9360         122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRK  201 (236)
Q Consensus       122 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  201 (236)
                      .+++.|.++++|.|.  .|++.|.....|..|+++|.  ++|.|.+|++.|.....|..|++ |++++||.|.+  |++.
T Consensus         6 s~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~   78 (107)
T 1wjp_A            6 SGASPVENKEVYQCR--LCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE--CMRT   78 (107)
T ss_dssp             CCCCCCCCCCCCBCT--TTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEE
T ss_pred             ccCcccCCCcCeECC--CCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCcc--ccch
Confidence            355667788888888  58888888888888888873  67888888888888888888885 88888888866  8888


Q ss_pred             cCChhhHHHHHH-hhcC-CcccCC
Q psy9360         202 FVDLSSLKKHTK-IHTQ-QTFHCN  223 (236)
Q Consensus       202 f~~~~~l~~H~~-~h~~-~~~~C~  223 (236)
                      |.....|.+|++ +|.+ ++|.|.
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCCCC
Confidence            888888888887 7776 777765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=8.3e-20  Score=117.49  Aligned_cols=86  Identities=37%  Similarity=0.910  Sum_probs=58.7

Q ss_pred             CCCcccc--cCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHH
Q psy9360         102 QRPFGCR--YCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKN  179 (236)
Q Consensus       102 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  179 (236)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|+.|++.|.....|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            4566666  4666666666666666666666677776  47777777777777777777777777777777777777777


Q ss_pred             hHHHHhcCCC
Q psy9360         180 NHLRIHYGLK  189 (236)
Q Consensus       180 ~H~~~h~~~~  189 (236)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            7777776654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=8.1e-20  Score=107.35  Aligned_cols=58  Identities=29%  Similarity=0.757  Sum_probs=53.6

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcCCc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQT  219 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  219 (236)
                      ++||.|.+||+.|...+.|..|+++|++++||.|.+  |++.|...+.|.+|+++|+|+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            689999999999999999999999999999999966  9999999999999999999854

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=9.9e-20  Score=121.04  Aligned_cols=94  Identities=20%  Similarity=0.323  Sum_probs=69.7

Q ss_pred             HhhcCCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCc
Q psy9360          96 ARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISN  175 (236)
Q Consensus        96 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  175 (236)
                      ++.|.++++|.|.+|++.|.....|..|++.|  .++|.|.  .|++.|.....|..|+. |.++++|.|.+|++.|...
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~--~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCP--YCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCT--TTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCC--CCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            34566667777777777777777777777776  3567777  58888877777888875 7777788888888888888


Q ss_pred             hHHHhHHH-HhcCCCCeecc
Q psy9360         176 THKNNHLR-IHYGLKPYVCH  194 (236)
Q Consensus       176 ~~l~~H~~-~h~~~~~~~C~  194 (236)
                      ..|..|++ .|+++++|.+.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            88888886 77777777763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.1e-19  Score=113.48  Aligned_cols=82  Identities=39%  Similarity=0.829  Sum_probs=61.2

Q ss_pred             CcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHH
Q psy9360         104 PFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       104 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      ||.|.+|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCC--cCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            466777777777777777777777777777777  577777777777777777777777777777777777777777777


Q ss_pred             HhcC
Q psy9360         184 IHYG  187 (236)
Q Consensus       184 ~h~~  187 (236)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            7754

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.78  E-value=8e-19  Score=115.09  Aligned_cols=87  Identities=32%  Similarity=0.658  Sum_probs=76.5

Q ss_pred             CCCCcccccCcccccccchhhHHHhHhhcCCCCCeecc--cccccccCchHHHhHHHHhcCCCCeeccccccccccCChh
Q psy9360         129 GDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLS  206 (236)
Q Consensus       129 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~  206 (236)
                      ..++|.|.++.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|.+  |++.|....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   89 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSD   89 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCHH
Confidence            35678888666999999999999999999999999996  69999999999999999999999999966  999999999


Q ss_pred             hHHHHHHhhcC
Q psy9360         207 SLKKHTKIHTQ  217 (236)
Q Consensus       207 ~l~~H~~~h~~  217 (236)
                      .|..|+++|.+
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=6.7e-19  Score=114.37  Aligned_cols=86  Identities=36%  Similarity=0.745  Sum_probs=72.0

Q ss_pred             cCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCC--CCeeccccccccccCCh
Q psy9360         128 NGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL--KPYVCHVEGCKRKFVDL  205 (236)
Q Consensus       128 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~~~C~~~f~~~  205 (236)
                      .++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++  ++|.|.+  |++.|...
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~   78 (95)
T 2yt9_A            3 SGSSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRP   78 (95)
T ss_dssp             CCCSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCBSSH
T ss_pred             CCCCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchhCCH
Confidence            356788888  58888888888888888888888888888888888888888888888876  8888866  99999888


Q ss_pred             hhHHHHHH-hhcC
Q psy9360         206 SSLKKHTK-IHTQ  217 (236)
Q Consensus       206 ~~l~~H~~-~h~~  217 (236)
                      ..|..|++ +|.+
T Consensus        79 ~~L~~H~~~~H~~   91 (95)
T 2yt9_A           79 DHLNGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHHHHTSCC
T ss_pred             HHHHHHHHHhcCC
Confidence            88988886 6654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=6.1e-19  Score=117.76  Aligned_cols=87  Identities=38%  Similarity=0.858  Sum_probs=71.1

Q ss_pred             hhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCCh
Q psy9360         126 IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDL  205 (236)
Q Consensus       126 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  205 (236)
                      .|.++++|.| .  |++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|.+  |++.|...
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESCH
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcCH
Confidence            4667778888 3  88888888888888888888888888888888888888888888888888888865  88888888


Q ss_pred             hhHHHHHHhhcC
Q psy9360         206 SSLKKHTKIHTQ  217 (236)
Q Consensus       206 ~~l~~H~~~h~~  217 (236)
                      ..|.+|+++|++
T Consensus        79 ~~l~~H~~~~~~   90 (110)
T 2csh_A           79 DSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHccc
Confidence            888888888763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=1.1e-18  Score=111.91  Aligned_cols=85  Identities=32%  Similarity=0.715  Sum_probs=73.8

Q ss_pred             CCCcccccCcccccccchhhHHHhHhhcCCCCCeecc--cccccccCchHHHhHHHHhcCCCCeeccccccccccCChhh
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSS  207 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  207 (236)
                      ..+|.|.++.|++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|++  |++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHHH
Confidence            4568888545999999999999999999888899997  59999999999999999999999999966  9999999999


Q ss_pred             HHHHHHhhc
Q psy9360         208 LKKHTKIHT  216 (236)
Q Consensus       208 l~~H~~~h~  216 (236)
                      |..|+++|.
T Consensus        81 l~~H~~~H~   89 (89)
T 2wbs_A           81 LALHMKRHF   89 (89)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhhC
Confidence            999998873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.9e-18  Score=112.26  Aligned_cols=85  Identities=35%  Similarity=0.811  Sum_probs=55.6

Q ss_pred             CCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCC--CCeecccccccccCchHH
Q psy9360         101 VQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS--KPYSCHVCGRSFISNTHK  178 (236)
Q Consensus       101 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l  178 (236)
                      ++++|.|.+|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|.++  ++|.|++|++.|.....|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            455666666666666666666666666666666666  4666666666666666666665  667777777777777777


Q ss_pred             HhHHH-HhcC
Q psy9360         179 NNHLR-IHYG  187 (236)
Q Consensus       179 ~~H~~-~h~~  187 (236)
                      ..|++ .|.+
T Consensus        82 ~~H~~~~H~~   91 (95)
T 2yt9_A           82 NGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHTSCC
T ss_pred             HHHHHHhcCC
Confidence            77764 4544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.3e-18  Score=116.21  Aligned_cols=87  Identities=26%  Similarity=0.633  Sum_probs=78.4

Q ss_pred             hcCCCCCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchH
Q psy9360          98 MHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTH  177 (236)
Q Consensus        98 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  177 (236)
                      .|.++++|.| .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHH
Confidence            5778889999 8999999999999999999999999998  699999999999999999999999999999999999999


Q ss_pred             HHhHHHHhcC
Q psy9360         178 KNNHLRIHYG  187 (236)
Q Consensus       178 l~~H~~~h~~  187 (236)
                      |..|+++|+.
T Consensus        81 l~~H~~~~~~   90 (110)
T 2csh_A           81 FHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHccc
Confidence            9999988854

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.3e-18  Score=107.91  Aligned_cols=73  Identities=26%  Similarity=0.544  Sum_probs=59.1

Q ss_pred             CCCCCeeccc--ccccccCchHHHhHHH-HhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCccccccC
Q psy9360         158 LDSKPYSCHV--CGRSFISNTHKNNHLR-IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK  230 (236)
Q Consensus       158 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~  230 (236)
                      .++++|.|..  |++.|.....|..|++ .|+++++|.|.++.|++.|.....|.+|+++|++ ++|.|+.||+.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567788876  8888888888888888 6888888888433388888888888888888887 8888888888884

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.75  E-value=1.4e-18  Score=116.93  Aligned_cols=95  Identities=19%  Similarity=0.282  Sum_probs=48.0

Q ss_pred             hhhhhhhhhccCCceeecCCCCCcccCChHHHHHHHhh--cCCCCCc-ccccCcccc--CCchhHHhhhhhhcCCCCccc
Q psy9360          61 SLQEDEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARM--HAVQRPF-GCRYCDKAF--KTSGDLSKHSAIHNGDRPYKC  135 (236)
Q Consensus        61 ~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C  135 (236)
                      .|..|++.|.++++|.|  ..|++.|.....|..|++.  |.+.+++ .|.+|++.|  .....|..|+++|.++++|.|
T Consensus         6 ~l~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRC--KDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCSEEB--SSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             hhhhheeeeCCCCCEEC--CccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            34455555555555555  5555555555555555555  4333332 255555544  444555555555544444444


Q ss_pred             ccCcccccccchhhHHHhHhhcCC
Q psy9360         136 NYTSCGRHFRTHTQRQIHERCHLD  159 (236)
Q Consensus       136 ~~~~C~~~f~~~~~l~~H~~~h~~  159 (236)
                      .  .|++.|.....|..|++.|+.
T Consensus        84 ~--~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           84 M--YCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             S--SSCCBCSSHHHHHHHHHHTTT
T ss_pred             C--CCCCccCCHHHHHHHHHHhCC
Confidence            4  344444444444444444443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=3.9e-18  Score=111.76  Aligned_cols=84  Identities=36%  Similarity=0.766  Sum_probs=49.9

Q ss_pred             CCccccc--CccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHh
Q psy9360         103 RPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNN  180 (236)
Q Consensus       103 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  180 (236)
                      ++|.|..  |++.|.....|..|++.|.++++|.|++..|++.|.....|..|+++|.++++|.|++|++.|.....|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            3455553  55555555555555555555555555422466666666666666666666666666666666666666666


Q ss_pred             HHHHhc
Q psy9360         181 HLRIHY  186 (236)
Q Consensus       181 H~~~h~  186 (236)
                      |+++|+
T Consensus        94 H~~~H~   99 (100)
T 2ebt_A           94 HMKRHQ   99 (100)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            666664

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=2.7e-18  Score=110.10  Aligned_cols=83  Identities=31%  Similarity=0.786  Sum_probs=49.2

Q ss_pred             CCccccc--CccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHh
Q psy9360         103 RPFGCRY--CDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNN  180 (236)
Q Consensus       103 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  180 (236)
                      ++|.|..  |++.|.....|..|++.|.++++|.|++..|++.|.....|..|+++|.++++|.|++|++.|.....|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3455555  55555555555555555555555666422466666666666666666666666666666666666666666


Q ss_pred             HHHHh
Q psy9360         181 HLRIH  185 (236)
Q Consensus       181 H~~~h  185 (236)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            66655

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.8e-18  Score=108.67  Aligned_cols=78  Identities=18%  Similarity=0.406  Sum_probs=65.5

Q ss_pred             HHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCC----CCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         150 RQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL----KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       150 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      |..|+++|.++++|.|.+|++.|.....|..|++.|+++    ++|.|.+  |++.|.....|..|+++|++ +++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            456788888888888888888888888888888877665    6888965  99999999999999988888 8888888


Q ss_pred             ccccc
Q psy9360         225 CNKTY  229 (236)
Q Consensus       225 C~~~f  229 (236)
                      ||.+|
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            88775

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.70  E-value=6.2e-19  Score=112.91  Aligned_cols=83  Identities=23%  Similarity=0.501  Sum_probs=72.4

Q ss_pred             CCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHH
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLK  209 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~  209 (236)
                      +++|.|.  .|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|++ .+|.|..  |++.|.....|.
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~--C~~~f~~~~~L~   75 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDK--VEELLSKNYHLE   75 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHH--HHHHHHHHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHH--HHHHHHHHhhhH
Confidence            4688898  6999999999999999999999999999999999999999999998874 7899965  999999999999


Q ss_pred             HHHHhhcC
Q psy9360         210 KHTKIHTQ  217 (236)
Q Consensus       210 ~H~~~h~~  217 (236)
                      .|++.+++
T Consensus        76 ~H~~~~h~   83 (88)
T 1llm_C           76 NEVARLKK   83 (88)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99987653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=1.2e-17  Score=97.99  Aligned_cols=58  Identities=36%  Similarity=0.820  Sum_probs=45.4

Q ss_pred             CCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      |+||.|.  .|++.|.....|..|+++|.+++||.|++||+.|...+.|..|+++|+++.
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6778887  588888888888888888888888888888888888888888888887653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.4e-17  Score=102.51  Aligned_cols=74  Identities=27%  Similarity=0.672  Sum_probs=65.2

Q ss_pred             cCCCCcccccCcccccccchhhHHHhHh-hcCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeeccccccccccC
Q psy9360         128 NGDRPYKCNYTSCGRHFRTHTQRQIHER-CHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFV  203 (236)
Q Consensus       128 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  203 (236)
                      .++++|.|.++.|++.|.....|..|++ .|.++++|.|++  |++.|.....|..|+++|++++||.|.+  |++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF--SGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS--SSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC--CCCCCC
Confidence            4577888886679999999999999998 788899999998  9999999999999999999999999966  999884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=5.8e-17  Score=102.80  Aligned_cols=80  Identities=28%  Similarity=0.631  Sum_probs=65.9

Q ss_pred             CcccccCcccccccchhhHHHhHhhcCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeeccccc---cccccCChh
Q psy9360         132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEG---CKRKFVDLS  206 (236)
Q Consensus       132 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~---C~~~f~~~~  206 (236)
                      ||.|++..|++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++   |.|  ..   |++.|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C--~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC--KKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EEC--CSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCC--CCCCCCCCccCCHH
Confidence            467732268888888888888888888888888877  88888888888888888887   888  45   888888888


Q ss_pred             hHHHHHHhhc
Q psy9360         207 SLKKHTKIHT  216 (236)
Q Consensus       207 ~l~~H~~~h~  216 (236)
                      .|.+|+++|+
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            8888888774

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=5.4e-18  Score=108.47  Aligned_cols=80  Identities=29%  Similarity=0.596  Sum_probs=47.7

Q ss_pred             CCcccccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHH
Q psy9360         103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHL  182 (236)
Q Consensus       103 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  182 (236)
                      +||.|.+|++.|.....|..|+++|.++++|.|+  .|++.|.....|..|+++|++ .+|.|+.|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            4556666666666666666666666666666665  466666666666666655553 4556666666666666666665


Q ss_pred             HHh
Q psy9360         183 RIH  185 (236)
Q Consensus       183 ~~h  185 (236)
                      +.+
T Consensus        79 ~~~   81 (88)
T 1llm_C           79 ARL   81 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=8.7e-17  Score=100.11  Aligned_cols=65  Identities=32%  Similarity=0.663  Sum_probs=51.5

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      .+.++++|.|++|++.|.....|..|+++|++++||.|.+  |++.|.....|.+|+++|++ ++|+|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3556677888888888888888888888888888888865  88888888888888888877 77776

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=5.8e-17  Score=105.75  Aligned_cols=80  Identities=13%  Similarity=0.224  Sum_probs=64.9

Q ss_pred             cccchhhHHHhHhhcCCCCCeeccccccccc-CchHHHhHHHHhcC-CCCeeccccccccccCChhhHHHHHHhhcC-Cc
Q psy9360         143 HFRTHTQRQIHERCHLDSKPYSCHVCGRSFI-SNTHKNNHLRIHYG-LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QT  219 (236)
Q Consensus       143 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~  219 (236)
                      .+.....+..|+++|.++++|.|.+|++.|. ....|..|+++|++ +++|.|.+  |++.|.....|.+|+++|++ ++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            3445566777888888888899999999998 88889999988888 88899966  99999999999999988887 66


Q ss_pred             ccCCc
Q psy9360         220 FHCNL  224 (236)
Q Consensus       220 ~~C~~  224 (236)
                      +.-..
T Consensus        83 ~~~~~   87 (98)
T 2gqj_A           83 SDAEA   87 (98)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            54443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.7e-16  Score=102.85  Aligned_cols=77  Identities=16%  Similarity=0.240  Sum_probs=68.1

Q ss_pred             cccccchhhHHHhHhhcCCCCCeecccccccc-cCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHH-HHhhcCC
Q psy9360         141 GRHFRTHTQRQIHERCHLDSKPYSCHVCGRSF-ISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKH-TKIHTQQ  218 (236)
Q Consensus       141 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~  218 (236)
                      ...|.....|..|++.+.++++|.|+.|++.| .....|..|+++| +++||.|.+  |++.|.....|..| +++|.++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCC
Confidence            45667778888999999999999999999999 8999999999999 999999966  99999999999999 8889886


Q ss_pred             cc
Q psy9360         219 TF  220 (236)
Q Consensus       219 ~~  220 (236)
                      +|
T Consensus        90 p~   91 (96)
T 2ctd_A           90 PS   91 (96)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.9e-16  Score=100.64  Aligned_cols=80  Identities=20%  Similarity=0.436  Sum_probs=67.0

Q ss_pred             hHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCC----CCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         119 DLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDS----KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       119 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      .|..|+++|.++++|.|.  .|++.|.....|..|++.++..    ++|.|.+|++.|.....|..|+++|++++++.|.
T Consensus         2 s~~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TTTCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             CcccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            456788888888888888  5888888888888888876654    6899999999999999999999999998999986


Q ss_pred             cccccccc
Q psy9360         195 VEGCKRKF  202 (236)
Q Consensus       195 ~~~C~~~f  202 (236)
                      .  |+..|
T Consensus        80 ~--~~~~~   85 (86)
T 1x6h_A           80 N--SGPSS   85 (86)
T ss_dssp             C--CCCCC
T ss_pred             C--CCCCC
Confidence            5  88765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=2.7e-16  Score=99.64  Aligned_cols=80  Identities=28%  Similarity=0.514  Sum_probs=56.2

Q ss_pred             Cccc--ccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeeccc---ccccccCchHH
Q psy9360         104 PFGC--RYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHV---CGRSFISNTHK  178 (236)
Q Consensus       104 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  178 (236)
                      ||.|  ..|++.|.....|..|+++|.++++|.|+++.|++.|.....|..|+++|.+   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4666  6677777777777777777777777777621277777777777777777766   77777   77777777777


Q ss_pred             HhHHHHhc
Q psy9360         179 NNHLRIHY  186 (236)
Q Consensus       179 ~~H~~~h~  186 (236)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            77777663

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=6.5e-16  Score=95.35  Aligned_cols=63  Identities=35%  Similarity=0.735  Sum_probs=53.1

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-Ccc
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTF  220 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~  220 (236)
                      .+.++++|.|..|++.|.....|..|+++|+++++|+|.+  |++.|.....|.+|+++|++ ++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            4566788888888888888888888888888888888866  88888888888888888887 665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.63  E-value=4.1e-17  Score=111.99  Aligned_cols=80  Identities=18%  Similarity=0.252  Sum_probs=64.4

Q ss_pred             CCcccccCccccccc------chhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCC
Q psy9360         131 RPYKCNYTSCGRHFR------THTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVD  204 (236)
Q Consensus       131 ~~~~C~~~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  204 (236)
                      +.+.|.  .|+..|.      ....|..|+ .|++++||.|++||+.|.....|..|+++|  ++||.|.+  |++.|..
T Consensus        40 ~~~~c~--~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~  112 (129)
T 2wbt_A           40 KRLIRA--IVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTS  112 (129)
T ss_dssp             HHHHHH--HHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSS
T ss_pred             Ccccch--hhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCC
Confidence            445555  3555444      455666666 588889999999999999999999999998  88999966  9999999


Q ss_pred             hhhHHHHHHhhcC
Q psy9360         205 LSSLKKHTKIHTQ  217 (236)
Q Consensus       205 ~~~l~~H~~~h~~  217 (236)
                      ...|.+|+++|++
T Consensus       113 ~~~l~~H~~~h~~  125 (129)
T 2wbt_A          113 TDSALDHVCKKHN  125 (129)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHCC
Confidence            9999999999886

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.7e-16  Score=102.55  Aligned_cols=68  Identities=21%  Similarity=0.303  Sum_probs=44.4

Q ss_pred             cCCCCCeecccccccccCchHHHhHHH-Hh---cCCCCeeccccccccccCChhhHHHH-HHhhcC-CcccCCccc
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLR-IH---YGLKPYVCHVEGCKRKFVDLSSLKKH-TKIHTQ-QTFHCNLCN  226 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~-~~~~C~~C~  226 (236)
                      -.|++||.|..||+.|...+.|..|++ .|   ++++||.|.+  |++.|...+.|.+| +++|.+ +||.|..+.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            345666777777777777667777765 36   4466677744  77777777777777 566666 667766543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.2e-16  Score=96.18  Aligned_cols=63  Identities=38%  Similarity=0.738  Sum_probs=56.0

Q ss_pred             HhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcCC
Q psy9360         154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ  218 (236)
Q Consensus       154 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  218 (236)
                      .++|.++++|.|++|++.|.....|..|+++|++++||.|.+  |++.|.....|.+|+++|++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCC
Confidence            456888899999999999999999999999999999999966  999999999999999998874

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=8.2e-16  Score=95.65  Aligned_cols=68  Identities=35%  Similarity=0.744  Sum_probs=57.2

Q ss_pred             hhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       124 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      ...+.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        10 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455677888888  5888888888888888888888888888888888888888888888888888877

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.4e-15  Score=92.81  Aligned_cols=62  Identities=27%  Similarity=0.418  Sum_probs=53.6

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-Cc
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QT  219 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~  219 (236)
                      .|.++++|.|.+|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|++ ++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCC
Confidence            3667888999999999999999999999998889999966  99999999999999998887 55

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.59  E-value=1.3e-15  Score=88.97  Aligned_cols=57  Identities=39%  Similarity=0.654  Sum_probs=49.2

Q ss_pred             CCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         159 DSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       159 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++++|.|++|++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999976  99999999999999999874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.58  E-value=1.3e-16  Score=109.55  Aligned_cols=115  Identities=14%  Similarity=0.152  Sum_probs=86.7

Q ss_pred             hhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccC------CchhHHhhhhhhcCCCCcccccCccc
Q psy9360          68 IFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFK------TSGDLSKHSAIHNGDRPYKCNYTSCG  141 (236)
Q Consensus        68 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~~~C~  141 (236)
                      .+.+.++|.|....+...|.....+..+. ....++.+.|++|.+.|.      ....|..|+ .|+++++|.|.  .|+
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~--~C~   81 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQ-LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCP--LCL   81 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHHTT-SCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECT--TTC
T ss_pred             hcccccccccccCCeeeeecHHhhhcccc-CChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECC--CCC
Confidence            45567788884444444443333222232 222356678888877766      445566665 68889999999  699


Q ss_pred             ccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         142 RHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       142 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +.|.....|..|+++|  ++||.|++||+.|.....|..|+++|++.
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999999998  78999999999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.1e-15  Score=95.12  Aligned_cols=66  Identities=23%  Similarity=0.418  Sum_probs=54.3

Q ss_pred             HHHhHhhcCCCCCeecccccccccCchHHHhHHH-HhcCC-CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         150 RQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLR-IHYGL-KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       150 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |..|+++|.++++|.|++|++.|.....|..|++ .|.++ ++|.|++  |++.|.....|.+|++++++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCC
Confidence            4467788888888889889988888888888987 56654 7899966  99999999999999888765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.3e-15  Score=90.63  Aligned_cols=61  Identities=25%  Similarity=0.513  Sum_probs=54.0

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHH-h-cCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRI-H-YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++|.++++|.|+.|++.|.....|..|+++ | .+++||.|++  |++.|...+.|.+|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            467888999999999999999999999988 6 5889999976  99999999999999998875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.1e-15  Score=99.69  Aligned_cols=78  Identities=18%  Similarity=0.224  Sum_probs=59.3

Q ss_pred             cCCchhHHhhhhhhcCCCCcccccCccccccc-chhhHHHhHhhcCC-CCCeecccccccccCchHHHhHHHHhcCCCCe
Q psy9360         114 FKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFR-THTQRQIHERCHLD-SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       114 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      +.....+..|+++|.++++|.|.  .|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|+++|++++|.
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            44455666777777777888887  5888887 77788888887777 77888888888888888888888888887775


Q ss_pred             ec
Q psy9360         192 VC  193 (236)
Q Consensus       192 ~C  193 (236)
                      .-
T Consensus        84 ~~   85 (98)
T 2gqj_A           84 DA   85 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.6e-15  Score=96.68  Aligned_cols=67  Identities=18%  Similarity=0.302  Sum_probs=58.0

Q ss_pred             hcCCCCcccccCcccccccchhhHHHhHh-hc---CCCCCeecccccccccCchHHHhH-HHHhcCCCCeeccc
Q psy9360         127 HNGDRPYKCNYTSCGRHFRTHTQRQIHER-CH---LDSKPYSCHVCGRSFISNTHKNNH-LRIHYGLKPYVCHV  195 (236)
Q Consensus       127 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~  195 (236)
                      -.++++|.|.  .|++.|.....|..|++ .|   .+++||.|.+||+.|.....|..| +++|++++||.|.+
T Consensus        13 ~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            4578889998  69999999999999987 58   567889999999999999999999 78999999999976

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=7.8e-15  Score=90.42  Aligned_cols=64  Identities=39%  Similarity=0.868  Sum_probs=54.4

Q ss_pred             hhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCe
Q psy9360         126 IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       126 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      .+.++++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            45667888888  68888888888888888888888888888888888888888898888888875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=4.6e-15  Score=93.36  Aligned_cols=61  Identities=26%  Similarity=0.527  Sum_probs=50.0

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHH-hhcC
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTK-IHTQ  217 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~  217 (236)
                      .++...++|.|++||+.|.....|..|+++|++++||.|.+  |++.|.....|.+|++ +|.+
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence            34556678889999999999889999998898888999965  9999999999999975 5654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.3e-14  Score=94.00  Aligned_cols=74  Identities=16%  Similarity=0.257  Sum_probs=57.4

Q ss_pred             cccCCchhHHhhhhhhcCCCCcccccCcccccc-cchhhHHHhHhhcCCCCCeecccccccccCchHHHhH-HHHhcCC
Q psy9360         112 KAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHF-RTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNH-LRIHYGL  188 (236)
Q Consensus       112 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  188 (236)
                      .+|.....|..|++.+.++++|.|+  .|++.| .....|..|+++| ++++|.|.+||+.|.....|..| +++|+++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            4556667777777777777888887  588888 7888888888888 77888888888888888888888 7777654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.53  E-value=1.3e-14  Score=84.67  Aligned_cols=54  Identities=30%  Similarity=0.638  Sum_probs=48.3

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ||.|++|++.|.....|..|+++|++++||.|.+  |++.|.....|.+|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcc
Confidence            5889999999999999999999999999999966  99999999999999998876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=5e-17  Score=100.05  Aligned_cols=69  Identities=19%  Similarity=0.340  Sum_probs=45.9

Q ss_pred             hhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         148 TQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       148 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      ..|..|+++|.++++|.|++||+.|.....|..       +++|.|.+  |++.|.....|.+|+++|++ ++|.|+.|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345556666666666666666666666665554       56677754  77777777777777777766 67777665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.5e-14  Score=87.66  Aligned_cols=65  Identities=40%  Similarity=0.800  Sum_probs=55.5

Q ss_pred             hhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       123 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      +.++|.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45667888888888  599999888889999888888888999999999999999999999887753

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.9e-14  Score=86.80  Aligned_cols=64  Identities=22%  Similarity=0.473  Sum_probs=53.9

Q ss_pred             hhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCe
Q psy9360         126 IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       126 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      .|.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++++|.
T Consensus         3 s~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            35677888888  58888888888888888888888888888888888888888888888888764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.5e-14  Score=88.37  Aligned_cols=64  Identities=22%  Similarity=0.375  Sum_probs=54.2

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcC---CCCeeccccccccccCChhhHHHHHHh-hcC-Cccc
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG---LKPYVCHVEGCKRKFVDLSSLKKHTKI-HTQ-QTFH  221 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~  221 (236)
                      +|.++++|.|.+|++.|.....|..|+++|++   +++|.|.+  |++.|.....|.+|++. |.+ ++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            37788999999999999999999999999985   88999976  99999999999999965 444 4443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.1e-14  Score=87.41  Aligned_cols=65  Identities=32%  Similarity=0.678  Sum_probs=54.3

Q ss_pred             HHHhHh-hcCCCCCeecc--cccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         150 RQIHER-CHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       150 l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +..|.. ++.++++|.|+  .|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            344433 57788899997  59999999999999999999999999976  9999999999999998874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.5e-14  Score=83.18  Aligned_cols=55  Identities=38%  Similarity=0.812  Sum_probs=48.6

Q ss_pred             CCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHH-HhhcC
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHT-KIHTQ  217 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~  217 (236)
                      +||.|++|++.|.....|..|+++|++++||.|++  |++.|.....|.+|+ ++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999966  999999999999997 57765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.6e-14  Score=87.62  Aligned_cols=68  Identities=21%  Similarity=0.490  Sum_probs=57.1

Q ss_pred             hHHhhhhhhcCCCCcccccCcccccccchhhHHHhHh-hcCCC-CCeecccccccccCchHHHhHHHHhcCC
Q psy9360         119 DLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHER-CHLDS-KPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       119 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      .|..|+++|.++++|.|.  .|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++++++.
T Consensus         2 s~~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            356788889999999998  69999999999999987 56664 7899999999999999999999886653

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=8.6e-14  Score=87.51  Aligned_cols=64  Identities=19%  Similarity=0.410  Sum_probs=53.7

Q ss_pred             hhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHH-HHhcCCC
Q psy9360         124 SAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHL-RIHYGLK  189 (236)
Q Consensus       124 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  189 (236)
                      +..+.+.++|.|+  .|++.|.....|..|+++|++++||.|++|++.|.....|..|+ +.|.+|.
T Consensus        20 ~~~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCP--VCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4456677888998  69999999999999999999999999999999999999999996 4676653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.43  E-value=1.2e-13  Score=80.44  Aligned_cols=55  Identities=33%  Similarity=0.646  Sum_probs=41.7

Q ss_pred             CCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhc
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      +++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+
T Consensus         2 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            5677787  588888888888888888887788888888888888888888887775

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=9e-16  Score=94.33  Aligned_cols=70  Identities=27%  Similarity=0.367  Sum_probs=51.1

Q ss_pred             chhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         117 SGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       117 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      ...|..|+++|.++++|.|.  .|++.|.....|..       +++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECS--SSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCC--cccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            34566777777777777777  57777777666555       567788888888877777888877777777777754

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=2e-13  Score=88.17  Aligned_cols=60  Identities=20%  Similarity=0.299  Sum_probs=47.0

Q ss_pred             CeecccccccccCchHHHhHHHH-hcCCCC--------eeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRI-HYGLKP--------YVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      .+.|+.|++.|.....|..|+++ |.++++        |.|.+  |++.|.....|.+|+++|++ ++|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35688888888888888888877 777666        78855  88888888888888888887 788876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.41  E-value=2.6e-13  Score=78.97  Aligned_cols=56  Identities=29%  Similarity=0.612  Sum_probs=45.6

Q ss_pred             CcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         132 PYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       132 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      ||.|.  .|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|++++
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46777  588888888888888888888888888888888888888888888887664

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.4e-13  Score=84.43  Aligned_cols=68  Identities=31%  Similarity=0.638  Sum_probs=54.1

Q ss_pred             hHHhhh-hhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhc
Q psy9360         119 DLSKHS-AIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       119 ~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      .|..|. .++.++++|.|++..|++.|.....|..|+++|.++++|.|++||+.|.....|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344453 34677888999644699999999999999999999899999999999999999999988774

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2e-13  Score=81.95  Aligned_cols=61  Identities=23%  Similarity=0.507  Sum_probs=48.7

Q ss_pred             hhhcCCCCcccccCcccccccchhhHHHhHhh-c-CCCCCeecccccccccCchHHHhHHHHhcC
Q psy9360         125 AIHNGDRPYKCNYTSCGRHFRTHTQRQIHERC-H-LDSKPYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       125 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ++|.++++|.|+  .|++.|.....|..|++. | .++++|.|+.|++.|.....|..|+++|++
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456777888888  588888888888888876 6 477888888888888888888888888765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.37  E-value=5.3e-13  Score=81.57  Aligned_cols=59  Identities=31%  Similarity=0.755  Sum_probs=50.9

Q ss_pred             cCCCCCeeccc--ccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhh
Q psy9360         157 HLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       157 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      ....++|.|..  |++.|.....|..|+++|++++||.|.++.|++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45567899988  999999999999999999999999995445999999999999998876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.9e-13  Score=80.75  Aligned_cols=56  Identities=20%  Similarity=0.312  Sum_probs=49.2

Q ss_pred             CCCCCeecccccccccCchHHHhHHHHhcCCCCeecc-ccccccccCChhhHHHHHHhhcC
Q psy9360         158 LDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH-VEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       158 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      .+.+||.|..|++.|. ...|..|+++ ++++||.|. .  |++.|...+.|.+|+++|..
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcc
Confidence            4567899999999999 8999999988 889999996 5  99999999999999998865

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=1.8e-12  Score=83.65  Aligned_cols=60  Identities=28%  Similarity=0.394  Sum_probs=49.2

Q ss_pred             cccccCcccccccchhhHHHhHhh-cCCCCC--------eecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         133 YKCNYTSCGRHFRTHTQRQIHERC-HLDSKP--------YSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       133 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      +.|.  .|++.|.....|..|+++ |.++++        |.|.+|++.|.....|..|+++|++++||.|.
T Consensus        26 ~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             Cccc--ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566  577777777777777776 666666        89999999999999999999999999999884

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=9.3e-13  Score=81.82  Aligned_cols=64  Identities=23%  Similarity=0.469  Sum_probs=43.7

Q ss_pred             hcCCCCcccccCcccccccchhhHHHhHhhcCC---CCCeecccccccccCchHHHhHHH-HhcCCCCee
Q psy9360         127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLD---SKPYSCHVCGRSFISNTHKNNHLR-IHYGLKPYV  192 (236)
Q Consensus       127 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~  192 (236)
                      |.++++|.|.  .|++.|.....|..|+++|.+   +++|.|.+|++.|.....|..|++ .|.++++..
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5566777777  477777777777777777764   667777777777777777777773 454555443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.1e-13  Score=74.47  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=24.1

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.8e-12  Score=76.12  Aligned_cols=56  Identities=34%  Similarity=0.730  Sum_probs=41.3

Q ss_pred             CCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHH-HHhcCC
Q psy9360         131 RPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHL-RIHYGL  188 (236)
Q Consensus       131 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  188 (236)
                      ++|.|.  .|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            356777  57777777777777777777777777777777777777777776 566543

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.4e-13  Score=74.37  Aligned_cols=43  Identities=30%  Similarity=0.445  Sum_probs=23.4

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.31  E-value=4.6e-13  Score=74.31  Aligned_cols=43  Identities=26%  Similarity=0.421  Sum_probs=21.3

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444555555533  55555555555555555544 45555444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.8e-13  Score=74.20  Aligned_cols=43  Identities=23%  Similarity=0.352  Sum_probs=21.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            344455555555533  55555555555555555554 55555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.9e-13  Score=74.16  Aligned_cols=43  Identities=30%  Similarity=0.432  Sum_probs=23.7

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.7e-13  Score=73.61  Aligned_cols=43  Identities=35%  Similarity=0.471  Sum_probs=22.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.7e-13  Score=74.24  Aligned_cols=43  Identities=33%  Similarity=0.472  Sum_probs=22.2

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444455555555533  55555555555555555554 55555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.30  E-value=5.1e-13  Score=74.10  Aligned_cols=43  Identities=30%  Similarity=0.366  Sum_probs=23.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.7e-13  Score=73.59  Aligned_cols=43  Identities=30%  Similarity=0.424  Sum_probs=25.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455555666666644  66666666666666666655 56666555

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.4e-13  Score=73.99  Aligned_cols=43  Identities=30%  Similarity=0.350  Sum_probs=20.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            344444445555533  55555555555555555544 44555444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.30  E-value=6.1e-13  Score=73.79  Aligned_cols=41  Identities=29%  Similarity=0.544  Sum_probs=20.3

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            34444444555555555555555555555555555555544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.6e-13  Score=74.30  Aligned_cols=43  Identities=30%  Similarity=0.418  Sum_probs=25.0

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            445555556666644  66666666666666666555 55666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.1e-13  Score=73.03  Aligned_cols=41  Identities=24%  Similarity=0.384  Sum_probs=20.0

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      ++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444445555533  55555555555555555544 44555444

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.6e-13  Score=73.92  Aligned_cols=43  Identities=30%  Similarity=0.409  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            344455555555533  55555555555555555554 55555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.2e-13  Score=74.06  Aligned_cols=43  Identities=23%  Similarity=0.334  Sum_probs=21.6

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            344445555555533  55555555555555555554 45555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.1e-13  Score=74.11  Aligned_cols=43  Identities=37%  Similarity=0.558  Sum_probs=22.0

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            344455555555533  55555555555555555554 55555544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=2.1e-12  Score=74.19  Aligned_cols=45  Identities=27%  Similarity=0.526  Sum_probs=32.1

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHH-hhcC-CcccCCccccccCc
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTK-IHTQ-QTFHCNLCNKTYKH  231 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~C~~C~~~f~~  231 (236)
                      |.+++||.|.+  |++.|.....|.+|++ +|.+ ++|.|+.|++.|++
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            45667777754  7777777777777775 6766 77777777777764

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.30  E-value=1.3e-12  Score=72.47  Aligned_cols=44  Identities=27%  Similarity=0.371  Sum_probs=37.2

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888888899965  99999999999999888888 88888887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.6e-13  Score=73.63  Aligned_cols=43  Identities=28%  Similarity=0.420  Sum_probs=21.7

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            344445555555533  55555555555555555554 45555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.5e-13  Score=73.65  Aligned_cols=43  Identities=30%  Similarity=0.458  Sum_probs=22.6

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444455555555543  55555555555555555554 55555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.1e-13  Score=74.09  Aligned_cols=43  Identities=26%  Similarity=0.337  Sum_probs=21.7

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            444455555555533  55555555555555555544 45555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=5.1e-13  Score=74.11  Aligned_cols=43  Identities=28%  Similarity=0.305  Sum_probs=24.4

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555555555543  55555555555555555555 55555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6e-13  Score=73.81  Aligned_cols=43  Identities=28%  Similarity=0.330  Sum_probs=24.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555556666643  66666666666666666555 55666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.2e-12  Score=71.88  Aligned_cols=43  Identities=23%  Similarity=0.340  Sum_probs=37.7

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888899999999999999999999999999999999865

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.8e-13  Score=73.86  Aligned_cols=43  Identities=33%  Similarity=0.422  Sum_probs=23.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=72.61  Aligned_cols=44  Identities=27%  Similarity=0.452  Sum_probs=37.5

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778888888888888888888888888888888888888865

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.7e-13  Score=72.95  Aligned_cols=44  Identities=30%  Similarity=0.509  Sum_probs=38.0

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            46778888889999999999999999999999999889998865

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.2e-13  Score=73.03  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=38.6

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999865

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.29  E-value=5.2e-13  Score=74.06  Aligned_cols=43  Identities=23%  Similarity=0.309  Sum_probs=21.6

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            344445555555533  55555555555555555554 45555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.2e-13  Score=73.76  Aligned_cols=41  Identities=29%  Similarity=0.576  Sum_probs=19.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.1e-12  Score=72.77  Aligned_cols=44  Identities=34%  Similarity=0.557  Sum_probs=37.8

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778888888999999999999999999999998889998864

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.8e-13  Score=72.93  Aligned_cols=44  Identities=39%  Similarity=0.656  Sum_probs=37.8

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            36778888888999999999999889999999998888998865

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9e-13  Score=73.07  Aligned_cols=44  Identities=30%  Similarity=0.558  Sum_probs=38.6

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46778888899999999999999999999999999999999865

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.29  E-value=1.1e-12  Score=72.67  Aligned_cols=44  Identities=34%  Similarity=0.585  Sum_probs=37.2

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777888888888888888888888888888888888888854

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.2e-13  Score=74.05  Aligned_cols=41  Identities=37%  Similarity=0.640  Sum_probs=19.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.4e-13  Score=73.42  Aligned_cols=43  Identities=26%  Similarity=0.437  Sum_probs=25.3

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555566666644  66666666666666666655 56666554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=5.2e-13  Score=74.04  Aligned_cols=43  Identities=28%  Similarity=0.354  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444455555555533  55555555555555555554 55555544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.9e-13  Score=73.81  Aligned_cols=43  Identities=28%  Similarity=0.277  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444455555555543  55555555555555555554 55555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1e-12  Score=72.83  Aligned_cols=44  Identities=30%  Similarity=0.430  Sum_probs=36.7

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            46777888888888888888888888888888888888888864

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1e-12  Score=72.84  Aligned_cols=44  Identities=34%  Similarity=0.567  Sum_probs=37.0

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            46777888888888888888888888888888888888888854

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.5e-13  Score=73.19  Aligned_cols=44  Identities=30%  Similarity=0.418  Sum_probs=34.7

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3666778888888865  88888888888888888877 78888776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.1e-13  Score=73.50  Aligned_cols=43  Identities=28%  Similarity=0.379  Sum_probs=23.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.6e-13  Score=72.96  Aligned_cols=44  Identities=39%  Similarity=0.684  Sum_probs=36.7

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888865

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=72.31  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=37.2

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46777888888888888888888888888888888888888854

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.28  E-value=9.9e-13  Score=72.91  Aligned_cols=44  Identities=30%  Similarity=0.507  Sum_probs=37.2

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36777888888888888888888888888888888888888865

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=72.43  Aligned_cols=44  Identities=36%  Similarity=0.643  Sum_probs=37.7

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            36778888888999999999999889999999998888998865

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=6.7e-13  Score=73.60  Aligned_cols=43  Identities=28%  Similarity=0.382  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.1e-13  Score=73.48  Aligned_cols=41  Identities=24%  Similarity=0.330  Sum_probs=19.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++||+.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=7e-13  Score=73.54  Aligned_cols=43  Identities=26%  Similarity=0.356  Sum_probs=24.6

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555566643  66666666666666655555 55665554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=72.77  Aligned_cols=44  Identities=25%  Similarity=0.483  Sum_probs=38.4

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|...+.|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            46778888899999999999999999999999999999999865

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.7e-13  Score=73.89  Aligned_cols=43  Identities=30%  Similarity=0.464  Sum_probs=22.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444455555555543  55555555555555555554 55555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.7e-13  Score=73.35  Aligned_cols=43  Identities=28%  Similarity=0.395  Sum_probs=23.1

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.28  E-value=8.7e-13  Score=73.14  Aligned_cols=44  Identities=20%  Similarity=0.349  Sum_probs=35.6

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            36677888888888888888888888888888888888888854

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.28  E-value=8.4e-13  Score=73.18  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=35.8

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888865

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=72.39  Aligned_cols=44  Identities=25%  Similarity=0.457  Sum_probs=36.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|...+.|.+|+++|++ ++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4677788888888865  88888888888888888887 88888877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=7.1e-13  Score=73.48  Aligned_cols=43  Identities=21%  Similarity=0.318  Sum_probs=23.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555543  55555555555555555555 55555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=72.41  Aligned_cols=44  Identities=32%  Similarity=0.583  Sum_probs=37.1

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777888888888888888888888888888888888888854

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.3e-13  Score=73.02  Aligned_cols=43  Identities=26%  Similarity=0.316  Sum_probs=23.1

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344555555555543  55555555555555555555 55555554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=72.85  Aligned_cols=44  Identities=36%  Similarity=0.590  Sum_probs=36.4

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888865

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=8e-13  Score=73.30  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=22.3

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            344455555555533  55555555555555555554 55555544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.2e-12  Score=72.63  Aligned_cols=43  Identities=19%  Similarity=0.160  Sum_probs=21.7

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344445555555533  55555555555555555554 55555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=72.84  Aligned_cols=42  Identities=36%  Similarity=0.649  Sum_probs=20.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444455555555555555555555555555555555543

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.5e-12  Score=72.13  Aligned_cols=44  Identities=23%  Similarity=0.257  Sum_probs=37.4

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4677888888999965  99999999999999988888 88988887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.6e-13  Score=73.92  Aligned_cols=44  Identities=27%  Similarity=0.435  Sum_probs=41.0

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 99999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.27  E-value=1.1e-12  Score=72.65  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=24.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344555555566643  66666666666666665555 55665554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.2e-12  Score=72.53  Aligned_cols=43  Identities=21%  Similarity=0.284  Sum_probs=23.0

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344455555555543  55555555555555555555 55555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=72.67  Aligned_cols=44  Identities=25%  Similarity=0.445  Sum_probs=35.9

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888854

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.6e-12  Score=72.04  Aligned_cols=44  Identities=32%  Similarity=0.492  Sum_probs=36.3

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888854

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.2e-12  Score=72.57  Aligned_cols=44  Identities=32%  Similarity=0.443  Sum_probs=35.9

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888854

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.6e-13  Score=73.38  Aligned_cols=43  Identities=26%  Similarity=0.361  Sum_probs=25.7

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            445555666666644  66666666666666666655 56666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.1e-12  Score=72.71  Aligned_cols=44  Identities=36%  Similarity=0.556  Sum_probs=36.5

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36777888888888888888888888888888888888888854

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=71.89  Aligned_cols=40  Identities=33%  Similarity=0.626  Sum_probs=19.5

Q ss_pred             HhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       154 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3444444444444444444444444444444444444444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.26  E-value=2e-13  Score=80.92  Aligned_cols=51  Identities=24%  Similarity=0.511  Sum_probs=31.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCccccccCccCCC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYKHQQSI  235 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L  235 (236)
                      .|+++|++++||.|+.  |++.|.....|.   ++|.+ ++|.|+.||+.|....++
T Consensus         4 ~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            4555666666666644  666666666554   55665 666666666666665544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=72.19  Aligned_cols=44  Identities=34%  Similarity=0.553  Sum_probs=36.4

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888854

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=71.95  Aligned_cols=43  Identities=33%  Similarity=0.534  Sum_probs=35.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.1e-13  Score=74.11  Aligned_cols=42  Identities=31%  Similarity=0.588  Sum_probs=21.2

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344445555555555555555555555555555555555553

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=72.01  Aligned_cols=43  Identities=33%  Similarity=0.545  Sum_probs=35.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||+|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888854

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=72.85  Aligned_cols=44  Identities=30%  Similarity=0.400  Sum_probs=40.8

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677899999999976  99999999999999999998 99999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.4e-12  Score=71.32  Aligned_cols=44  Identities=20%  Similarity=0.255  Sum_probs=38.0

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888889999999999999999999999999999999864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=72.66  Aligned_cols=42  Identities=36%  Similarity=0.471  Sum_probs=20.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            344445555555533  55555555555555555544 4555544

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.6e-12  Score=72.00  Aligned_cols=43  Identities=30%  Similarity=0.541  Sum_probs=35.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888854

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=72.03  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=37.6

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            36678888888999999999999889999999998888998865

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=71.80  Aligned_cols=43  Identities=26%  Similarity=0.446  Sum_probs=34.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667788888888888888888888888888888888888854

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.3e-12  Score=71.38  Aligned_cols=43  Identities=30%  Similarity=0.546  Sum_probs=36.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888865

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=72.24  Aligned_cols=44  Identities=32%  Similarity=0.563  Sum_probs=35.2

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677788888888888888888888888888888888888854

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=72.01  Aligned_cols=44  Identities=30%  Similarity=0.569  Sum_probs=36.1

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777888888888888888888888888888888888888854

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.25  E-value=1.6e-12  Score=71.99  Aligned_cols=44  Identities=32%  Similarity=0.498  Sum_probs=35.9

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888854

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=71.99  Aligned_cols=44  Identities=30%  Similarity=0.526  Sum_probs=37.0

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778888888888888888888888888888888888888864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=72.50  Aligned_cols=44  Identities=20%  Similarity=0.356  Sum_probs=35.1

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      +|+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4667778888888865  88888888888888888887 78888876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.6e-12  Score=72.08  Aligned_cols=44  Identities=23%  Similarity=0.291  Sum_probs=36.5

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888854

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=72.24  Aligned_cols=42  Identities=24%  Similarity=0.320  Sum_probs=21.1

Q ss_pred             HHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       182 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      +++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34444555555533  55555555555555555544 45555544

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.4e-12  Score=70.70  Aligned_cols=42  Identities=38%  Similarity=0.676  Sum_probs=20.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444445555555555555555555555555555555443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.8e-12  Score=71.80  Aligned_cols=43  Identities=26%  Similarity=0.526  Sum_probs=35.5

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888854

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=2.9e-12  Score=70.98  Aligned_cols=42  Identities=33%  Similarity=0.578  Sum_probs=24.7

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555666666666666666666666666655665554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.3e-12  Score=70.77  Aligned_cols=42  Identities=29%  Similarity=0.499  Sum_probs=25.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455556666666666666666666666666666666666654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-12  Score=70.86  Aligned_cols=43  Identities=26%  Similarity=0.419  Sum_probs=37.7

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            5677888899999999999999999999999999999999865

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.23  E-value=3.4e-12  Score=70.69  Aligned_cols=43  Identities=26%  Similarity=0.379  Sum_probs=36.2

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888854

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.4e-12  Score=71.34  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=40.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 99999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=72.29  Aligned_cols=43  Identities=28%  Similarity=0.395  Sum_probs=23.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHH-hhcC-CcccCCcc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTK-IHTQ-QTFHCNLC  225 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~C~~C  225 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|++ +|.+ ++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            444555555555543  5555555555555555 5555 55555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=70.75  Aligned_cols=42  Identities=29%  Similarity=0.504  Sum_probs=25.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            445556666666666666666666666666666666666654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=70.61  Aligned_cols=42  Identities=31%  Similarity=0.600  Sum_probs=25.7

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455556666666666666666666666666666666666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.22  E-value=4.6e-12  Score=68.67  Aligned_cols=39  Identities=26%  Similarity=0.480  Sum_probs=19.8

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      ++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344445555555555555555555555555555555544

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.4e-12  Score=70.21  Aligned_cols=42  Identities=36%  Similarity=0.686  Sum_probs=25.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=70.14  Aligned_cols=42  Identities=26%  Similarity=0.448  Sum_probs=26.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4e-12  Score=70.39  Aligned_cols=42  Identities=36%  Similarity=0.628  Sum_probs=24.1

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555553

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=70.67  Aligned_cols=42  Identities=36%  Similarity=0.609  Sum_probs=24.4

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            445555555566666666666655566666555555555553

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4e-12  Score=70.39  Aligned_cols=42  Identities=36%  Similarity=0.640  Sum_probs=23.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555553

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=9.6e-12  Score=71.37  Aligned_cols=47  Identities=30%  Similarity=0.614  Sum_probs=38.4

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHH-HhcCCCCeeccccccccccCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLR-IHYGLKPYVCHVEGCKRKFVD  204 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~  204 (236)
                      .|.++++|.|++|++.|.....|..|++ +|++++||+|.+  |++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            3567788888888888888888888886 788888888865  8888865

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=70.50  Aligned_cols=43  Identities=37%  Similarity=0.587  Sum_probs=35.0

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHH-HhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLR-IHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  195 (236)
                      |+++|.++++|.|++|++.|.....|..|++ +|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            6677888888888888888888888888888 888888888854

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=70.16  Aligned_cols=42  Identities=26%  Similarity=0.487  Sum_probs=24.3

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555556666666665555566665555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=70.43  Aligned_cols=42  Identities=31%  Similarity=0.608  Sum_probs=24.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555666666666666666666666666666666553

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=9.9e-12  Score=74.48  Aligned_cols=60  Identities=22%  Similarity=0.412  Sum_probs=51.3

Q ss_pred             hcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecc-cccccccCchHHHhHHHHhcCCCC
Q psy9360         127 HNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCH-VCGRSFISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       127 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  190 (236)
                      ..++++|.|.  .|++.|. ...|..|+++ .+++||.|+ .||+.|...+.|..|+++|...++
T Consensus         5 ~C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3467788998  6999999 8999999888 888999999 999999999999999998876554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.7e-12  Score=70.09  Aligned_cols=42  Identities=29%  Similarity=0.490  Sum_probs=22.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.9e-12  Score=67.94  Aligned_cols=40  Identities=25%  Similarity=0.399  Sum_probs=22.5

Q ss_pred             HhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       154 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3445555555555555555555555555555555555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.4e-12  Score=70.21  Aligned_cols=42  Identities=26%  Similarity=0.454  Sum_probs=23.2

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=70.52  Aligned_cols=42  Identities=36%  Similarity=0.624  Sum_probs=24.7

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            445555555666666666666666666666666666666554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.1e-12  Score=69.62  Aligned_cols=42  Identities=31%  Similarity=0.561  Sum_probs=22.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.3e-12  Score=70.23  Aligned_cols=42  Identities=43%  Similarity=0.725  Sum_probs=23.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            444555555555555555555555555555555555555553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.19  E-value=5.1e-12  Score=72.53  Aligned_cols=49  Identities=10%  Similarity=0.175  Sum_probs=27.2

Q ss_pred             ccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-Ccc
Q psy9360         170 RSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTF  220 (236)
Q Consensus       170 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~  220 (236)
                      +.|.....|..|+++|++++||.|.+  |++.|...+.|..|+++|++ ++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCC
Confidence            34455555555555555555555543  55555555555555555555 444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.8e-12  Score=70.06  Aligned_cols=42  Identities=33%  Similarity=0.607  Sum_probs=23.3

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5e-12  Score=70.00  Aligned_cols=42  Identities=33%  Similarity=0.657  Sum_probs=23.5

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.3e-12  Score=69.90  Aligned_cols=42  Identities=33%  Similarity=0.637  Sum_probs=24.3

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555566666666666555566665555555555553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.8e-12  Score=68.47  Aligned_cols=41  Identities=20%  Similarity=0.320  Sum_probs=22.8

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44455555555555555555555555555555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.3e-11  Score=67.98  Aligned_cols=40  Identities=25%  Similarity=0.412  Sum_probs=22.6

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCccc
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCN  226 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~  226 (236)
                      |++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.||
T Consensus         5 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45555555543  55555555555555555555 555555554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.18  E-value=4.9e-12  Score=70.02  Aligned_cols=43  Identities=28%  Similarity=0.391  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.3e-12  Score=68.56  Aligned_cols=41  Identities=24%  Similarity=0.440  Sum_probs=19.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            33444444445555555555544445555444444444444

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.9e-12  Score=70.02  Aligned_cols=42  Identities=31%  Similarity=0.622  Sum_probs=23.4

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344555555555555555555555555555555555555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5e-12  Score=69.98  Aligned_cols=42  Identities=31%  Similarity=0.580  Sum_probs=23.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.3e-11  Score=69.00  Aligned_cols=41  Identities=20%  Similarity=0.421  Sum_probs=26.7

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcccc
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNK  227 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~  227 (236)
                      |.++++|.|.+  |++.|.....|.+|+++|.+ ++|.|++|||
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            44556666644  66666666666666666666 6666666664

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.5e-12  Score=69.04  Aligned_cols=42  Identities=31%  Similarity=0.550  Sum_probs=24.9

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555556666666666666666666666666666666553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.7e-12  Score=69.46  Aligned_cols=41  Identities=24%  Similarity=0.442  Sum_probs=21.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            44445555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6e-12  Score=69.67  Aligned_cols=43  Identities=28%  Similarity=0.360  Sum_probs=39.7

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999999 9999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=69.63  Aligned_cols=43  Identities=30%  Similarity=0.481  Sum_probs=39.7

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=1e-11  Score=67.25  Aligned_cols=40  Identities=25%  Similarity=0.365  Sum_probs=22.4

Q ss_pred             HhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       154 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      +++|.++++|.|++||+.|.....|..|+++|++++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4445555555555555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.17  E-value=7.5e-12  Score=67.80  Aligned_cols=41  Identities=22%  Similarity=0.361  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567899999999976  99999999999999999998 999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=69.63  Aligned_cols=42  Identities=26%  Similarity=0.510  Sum_probs=26.3

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.4e-12  Score=68.72  Aligned_cols=41  Identities=29%  Similarity=0.571  Sum_probs=23.0

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++||+.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.8e-12  Score=69.73  Aligned_cols=43  Identities=26%  Similarity=0.362  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.17  E-value=8.7e-12  Score=71.55  Aligned_cols=52  Identities=15%  Similarity=0.255  Sum_probs=48.2

Q ss_pred             cccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCee
Q psy9360         141 GRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYV  192 (236)
Q Consensus       141 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  192 (236)
                      ++.|.....|..|+++|.++++|.|.+||+.|...+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4567888899999999999999999999999999999999999999999874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.9e-12  Score=69.38  Aligned_cols=43  Identities=28%  Similarity=0.375  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999999 9999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.7e-12  Score=68.72  Aligned_cols=41  Identities=29%  Similarity=0.453  Sum_probs=20.1

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            33444444445555555555555555555555544444444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.4e-12  Score=69.28  Aligned_cols=41  Identities=37%  Similarity=0.501  Sum_probs=23.4

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      ++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         5 ~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455555566643  66666666666666655555 55665554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.7e-12  Score=67.76  Aligned_cols=41  Identities=32%  Similarity=0.611  Sum_probs=22.0

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.+++||.|+.|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            33445555555555555555555555555555555555544

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.7e-12  Score=69.22  Aligned_cols=43  Identities=23%  Similarity=0.391  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.1e-12  Score=68.41  Aligned_cols=40  Identities=25%  Similarity=0.375  Sum_probs=19.8

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |+++|++++||.|.+  |++.|.....|..|+++|.+ ++|+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            344444555555533  55555555555555555544 44544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.6e-12  Score=69.47  Aligned_cols=43  Identities=30%  Similarity=0.428  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.1e-12  Score=69.12  Aligned_cols=43  Identities=33%  Similarity=0.502  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      +|+++|++++||.|.+  |++.|.....|.+|+++|++ ++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.2e-12  Score=69.08  Aligned_cols=43  Identities=30%  Similarity=0.488  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.6e-12  Score=69.23  Aligned_cols=43  Identities=30%  Similarity=0.461  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.2e-12  Score=69.11  Aligned_cols=43  Identities=28%  Similarity=0.376  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      +|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999973

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.1e-12  Score=69.10  Aligned_cols=43  Identities=26%  Similarity=0.375  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|..|+++|.+ ++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.6e-12  Score=69.01  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=25.2

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            45555666666666666666666666666666666666665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=2.6e-11  Score=66.72  Aligned_cols=42  Identities=31%  Similarity=0.457  Sum_probs=36.5

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccc
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCK  199 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~  199 (236)
                      +|.++++|.|++|++.|.....|..|+++|+++++|.|++  ||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            5778889999999999999999999999999999999966  75

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.6e-12  Score=69.49  Aligned_cols=43  Identities=28%  Similarity=0.469  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=67.93  Aligned_cols=42  Identities=29%  Similarity=0.441  Sum_probs=38.9

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      .|+++|++++||.|.+  |++.|.....|..|+++|.+ ++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.5e-12  Score=69.24  Aligned_cols=43  Identities=30%  Similarity=0.559  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=68.33  Aligned_cols=42  Identities=36%  Similarity=0.545  Sum_probs=35.5

Q ss_pred             HhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       154 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456788888888889888888888888888888888888865

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.6e-12  Score=68.12  Aligned_cols=41  Identities=29%  Similarity=0.493  Sum_probs=25.4

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45556666666666666666666666666666666666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.7e-12  Score=69.22  Aligned_cols=43  Identities=26%  Similarity=0.458  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.4e-12  Score=69.04  Aligned_cols=43  Identities=28%  Similarity=0.459  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.9e-11  Score=66.90  Aligned_cols=41  Identities=17%  Similarity=0.278  Sum_probs=23.4

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34455555555555555555555555555555555555555

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.2e-11  Score=68.37  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=26.7

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcC-CCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG-LKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  194 (236)
                      |+++|.+++||.|++|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45556666666666666666666666666666666 6666663

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=66.94  Aligned_cols=41  Identities=34%  Similarity=0.502  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567899999999976  99999999999999999998 999984

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.4e-12  Score=69.07  Aligned_cols=43  Identities=28%  Similarity=0.444  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.5e-12  Score=68.53  Aligned_cols=43  Identities=21%  Similarity=0.400  Sum_probs=40.4

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999983

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=8.3e-12  Score=67.63  Aligned_cols=39  Identities=36%  Similarity=0.651  Sum_probs=18.2

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      ++|.++++|.|++|++.|.....|..|+++|++++||+|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444444444444444444444444444444443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1e-11  Score=68.01  Aligned_cols=42  Identities=21%  Similarity=0.407  Sum_probs=38.8

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      +|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.8e-12  Score=68.07  Aligned_cols=40  Identities=23%  Similarity=0.242  Sum_probs=19.2

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |+++|++++||.|.+  |++.|.....|..|+++|.+ ++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            344444444555533  55555555555555555444 44444

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.7e-12  Score=68.98  Aligned_cols=43  Identities=26%  Similarity=0.416  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.4e-12  Score=69.28  Aligned_cols=43  Identities=30%  Similarity=0.438  Sum_probs=39.4

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-11  Score=68.60  Aligned_cols=43  Identities=30%  Similarity=0.417  Sum_probs=39.4

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4678899999999976  99999999999999999998 9999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8e-12  Score=69.13  Aligned_cols=43  Identities=30%  Similarity=0.421  Sum_probs=39.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.6e-12  Score=68.82  Aligned_cols=43  Identities=26%  Similarity=0.571  Sum_probs=39.3

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.5e-11  Score=67.98  Aligned_cols=42  Identities=31%  Similarity=0.580  Sum_probs=25.0

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555566666666666666666666666666666666653

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-11  Score=68.60  Aligned_cols=41  Identities=32%  Similarity=0.586  Sum_probs=21.0

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444555555555555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.3e-12  Score=68.14  Aligned_cols=42  Identities=33%  Similarity=0.502  Sum_probs=38.8

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      .|+++|++++||.|.+  |++.|.....|..|+++|.+ ++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 999995

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-11  Score=68.75  Aligned_cols=38  Identities=32%  Similarity=0.499  Sum_probs=18.5

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      +|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.12  E-value=1.9e-12  Score=76.60  Aligned_cols=52  Identities=17%  Similarity=0.373  Sum_probs=32.4

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhH
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSL  208 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l  208 (236)
                      .|+++|.+++||.|+.||+.|.....|.   ++|++++||.|.+  |++.|....++
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCC--CCCccccCccc
Confidence            4556666666666666666666655554   5666666666644  66666655443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=67.92  Aligned_cols=42  Identities=26%  Similarity=0.330  Sum_probs=35.6

Q ss_pred             HHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       182 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      +++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35678888999965  99999999999999998887 88999887

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-11  Score=68.55  Aligned_cols=42  Identities=29%  Similarity=0.429  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            678899999999976  99999999999999999998 9999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.3e-11  Score=67.50  Aligned_cols=43  Identities=19%  Similarity=0.242  Sum_probs=40.4

Q ss_pred             HhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         152 IHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       152 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4778899999999999999999999999999999999999983

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=3.1e-11  Score=67.36  Aligned_cols=43  Identities=30%  Similarity=0.495  Sum_probs=35.0

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecccccccc
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKR  200 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  200 (236)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|.+  |++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            3566778888888888888888888888888888888866  874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.1e-11  Score=66.74  Aligned_cols=40  Identities=28%  Similarity=0.432  Sum_probs=25.4

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      ++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3455666666666666666666666666666666666664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.4e-11  Score=68.18  Aligned_cols=43  Identities=33%  Similarity=0.428  Sum_probs=39.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.1e-11  Score=68.57  Aligned_cols=43  Identities=21%  Similarity=0.394  Sum_probs=39.4

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .|+++|++++||.|.+  |++.|.....|..|+++|.+ ++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 9999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2e-11  Score=68.08  Aligned_cols=44  Identities=23%  Similarity=0.393  Sum_probs=26.1

Q ss_pred             HHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCcc
Q psy9360         182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLC  225 (236)
Q Consensus       182 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C  225 (236)
                      .++|++++||.|.++.|++.|.....|.+|+++|.+ ++|+|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345556666666411366666666666666666665 66666655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=7.5e-11  Score=71.83  Aligned_cols=60  Identities=27%  Similarity=0.703  Sum_probs=45.8

Q ss_pred             hhccCCceeecCCCCCcccCChHHHHHHHhhcCCCCCccccc--CccccCCchhHHhhhhhh
Q psy9360          68 IFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRY--CDKAFKTSGDLSKHSAIH  127 (236)
Q Consensus        68 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  127 (236)
                      .....++|.|....|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344556788822238888888888888888888888888864  888888888888887664

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.6e-11  Score=65.76  Aligned_cols=41  Identities=29%  Similarity=0.506  Sum_probs=20.1

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            34444444555555555555555555555555554444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.09  E-value=6.3e-11  Score=64.44  Aligned_cols=37  Identities=14%  Similarity=0.167  Sum_probs=20.0

Q ss_pred             cCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            4445555555555555555555555555555555555

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.09  E-value=2.4e-11  Score=65.69  Aligned_cols=40  Identities=25%  Similarity=0.399  Sum_probs=37.0

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            567899999999976  99999999999999999998 99988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.4e-11  Score=68.19  Aligned_cols=42  Identities=26%  Similarity=0.330  Sum_probs=38.9

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 999996

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.8e-11  Score=66.58  Aligned_cols=38  Identities=34%  Similarity=0.594  Sum_probs=18.5

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      +|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.9e-12  Score=67.29  Aligned_cols=40  Identities=30%  Similarity=0.456  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999976  99999999999999999998 99988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=67.42  Aligned_cols=42  Identities=29%  Similarity=0.534  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999976  99999999999999999998 9999973

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=66.34  Aligned_cols=40  Identities=33%  Similarity=0.547  Sum_probs=37.1

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            667899999999976  99999999999999999998 99987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.8e-11  Score=66.29  Aligned_cols=40  Identities=35%  Similarity=0.589  Sum_probs=37.1

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |+++|++++||.|.+  |++.|...+.|.+|+++|.+ ++|+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            567899999999976  99999999999999999998 99988

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.3e-11  Score=65.94  Aligned_cols=41  Identities=17%  Similarity=0.185  Sum_probs=37.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      |+++|++++||.|.+  |++.|.....|..|+++|.+ ++|+|+
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            667899999999976  99999999999999999998 999995

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.9e-11  Score=66.89  Aligned_cols=42  Identities=26%  Similarity=0.428  Sum_probs=38.5

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      .|+++|++++||.|.+  |++.|.....|.+|+++|.+ ++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999976  99999999999999999998 999983

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.5e-11  Score=63.37  Aligned_cols=37  Identities=32%  Similarity=0.564  Sum_probs=17.5

Q ss_pred             cCCCCCeecccccccccCchHHHhHHHHhcCCCCeec
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVC  193 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  193 (236)
                      |.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3444444444444444444444444444444444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.4e-11  Score=65.06  Aligned_cols=41  Identities=27%  Similarity=0.382  Sum_probs=37.8

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      .|+++|++++||.|.+  |++.|...+.|..|+++|.+ ++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4778899999999976  99999999999999999998 89887

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.03  E-value=1.3e-10  Score=63.12  Aligned_cols=40  Identities=23%  Similarity=0.343  Sum_probs=36.5

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      ++|++++||.|..  |++.|.....|.+|+++|.+ ++|+|++
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            3578999999966  99999999999999999998 9999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.4e-11  Score=65.30  Aligned_cols=43  Identities=28%  Similarity=0.494  Sum_probs=34.8

Q ss_pred             hHhhcCCCCCeecc--cccccccCchHHHhHHHHhcCCCCeeccc
Q psy9360         153 HERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLKPYVCHV  195 (236)
Q Consensus       153 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  195 (236)
                      |.++|.++++|.|.  .|++.|.....|..|+++|++++||+|.+
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34567788888887  78888888888888888888888888854

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.2e-11  Score=65.14  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=37.3

Q ss_pred             HHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       182 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      .++|++++||+|.+  |++.|.....|.+|+++|.+ ++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45788999999976  99999999999999999998 9999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.2e-10  Score=64.27  Aligned_cols=41  Identities=22%  Similarity=0.286  Sum_probs=37.3

Q ss_pred             HHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCc
Q psy9360         182 LRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNL  224 (236)
Q Consensus       182 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~  224 (236)
                      +++|++++||.|.+  |++.|.....|..|+++|.+ ++|+|+.
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            45788999999976  99999999999999999998 9999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.7e-11  Score=74.36  Aligned_cols=64  Identities=19%  Similarity=0.328  Sum_probs=45.5

Q ss_pred             hHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         149 QRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       149 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      .|..|+.++.+.+++.|..|++.|. ...|..|+ .|.+++|+.|+.  |++.|. +..|..|+++|.+
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccC
Confidence            4556666677777777777777774 66777777 777777777754  777766 4777777777765

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.4e-10  Score=61.34  Aligned_cols=38  Identities=29%  Similarity=0.454  Sum_probs=35.0

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      ++|++++||.|.+  |++.|.....|..|+++|.+ ++|.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3678999999976  99999999999999999998 99988

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.88  E-value=9.1e-10  Score=58.30  Aligned_cols=34  Identities=24%  Similarity=0.565  Sum_probs=16.1

Q ss_pred             CCCCeecccccccccCchHHHhHHHHhcCCCCee
Q psy9360         159 DSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYV  192 (236)
Q Consensus       159 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  192 (236)
                      ++++|.|.+||+.|...+.|..|+++|++++||.
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            3444444444444444444444444444444443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.7e-10  Score=69.87  Aligned_cols=67  Identities=18%  Similarity=0.235  Sum_probs=56.4

Q ss_pred             hhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         118 GDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       118 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      ..|..|+..+.+.+++.|.  .|+..|. ...|..|. .+.+++++.|+.|++.|.. ..|..|+++|.++.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            4677888888999999998  5999884 78889998 8888899999999998874 78899998887653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.9e-09  Score=63.40  Aligned_cols=37  Identities=22%  Similarity=0.327  Sum_probs=24.8

Q ss_pred             cCCCCCeeccc--ccccccCchHHHhHH-HHhcCCCCeec
Q psy9360         157 HLDSKPYSCHV--CGRSFISNTHKNNHL-RIHYGLKPYVC  193 (236)
Q Consensus       157 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C  193 (236)
                      ..+++||.|..  |++.|...+.|..|+ ++|++++||.|
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            45666777754  777777777777775 46777777666

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=5.1e-11  Score=75.42  Aligned_cols=58  Identities=19%  Similarity=0.248  Sum_probs=44.3

Q ss_pred             HhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         154 ERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       154 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      .++|.++++|.|++|++.|.....|..|+++|++++||+|..  |.    ....|..|+++|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR--QE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC--CS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch--hh----hHHHHHhhhccccc
Confidence            456778888888888888888888888888888888888843  44    45666777777765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.7e-09  Score=59.45  Aligned_cols=42  Identities=21%  Similarity=0.349  Sum_probs=21.1

Q ss_pred             hhhhhccCCceeecCCCCCcccCChHHHHHHHhhcCC-CCCcccc
Q psy9360          65 DEKIFEKEKLHVCTYEDCNSVFQTQAEWEEHARMHAV-QRPFGCR  108 (236)
Q Consensus        65 h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  108 (236)
                      |++.|.++++|.|  ..|++.|.....|..|+++|.+ +++|.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKC--NKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEEC--SSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEEC--cCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444455555  4555555555555555555554 4555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.7e-09  Score=56.46  Aligned_cols=33  Identities=24%  Similarity=0.494  Sum_probs=16.0

Q ss_pred             cCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      |.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            444444555555555554444555544444443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.79  E-value=4.3e-09  Score=54.06  Aligned_cols=31  Identities=29%  Similarity=0.562  Sum_probs=14.6

Q ss_pred             CCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         158 LDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       158 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      .++++|.|.+|++.|...+.|..|+++|+++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            3444444444444444444444444444444

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.79  E-value=4.5e-09  Score=55.54  Aligned_cols=36  Identities=25%  Similarity=0.566  Sum_probs=32.4

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHC  222 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C  222 (236)
                      |++++||.|.+  |++.|...+.|..|+++|.+ ++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            57889999976  99999999999999999998 88876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=4.2e-09  Score=61.93  Aligned_cols=39  Identities=23%  Similarity=0.380  Sum_probs=27.6

Q ss_pred             cCCCCeeccccccccccCChhhHHHHH-HhhcC-CcccCCc
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHT-KIHTQ-QTFHCNL  224 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~-~~~~C~~  224 (236)
                      ++++||+|..+.|+++|...+.|.+|+ ++|++ +||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            567777775334777777777777776 57777 7777754

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.78  E-value=2.6e-09  Score=55.70  Aligned_cols=34  Identities=35%  Similarity=0.609  Sum_probs=17.9

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |+++|++++||+|++  |++.|.....|..|+++|.
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhc
Confidence            344455555555533  5555555555555555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=6.2e-09  Score=54.52  Aligned_cols=33  Identities=27%  Similarity=0.383  Sum_probs=17.9

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +++++||+|+++.|++.|...+.|.+|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            345556666322366666666666666665554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.76  E-value=5.5e-09  Score=53.69  Aligned_cols=31  Identities=32%  Similarity=0.788  Sum_probs=14.6

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |++++||.|.+  |++.|...+.|.+|+++|++
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCC
Confidence            34444444433  55555554455555444443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.75  E-value=2e-09  Score=56.17  Aligned_cols=36  Identities=31%  Similarity=0.511  Sum_probs=33.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      |+++|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            678899999999999999999999999999999864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.75  E-value=6.8e-09  Score=52.64  Aligned_cols=30  Identities=23%  Similarity=0.582  Sum_probs=18.6

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCe
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      ||.|++||+.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            556666666666666666666666666555

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=6.8e-09  Score=54.42  Aligned_cols=32  Identities=28%  Similarity=0.646  Sum_probs=15.5

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++++||.|.++.|++.|...+.|.+|+++|.+
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            34455555311355555555555555555544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=7.3e-10  Score=70.05  Aligned_cols=48  Identities=17%  Similarity=0.261  Sum_probs=42.0

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC-CcccCCccccccC
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCNLCNKTYK  230 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~  230 (236)
                      |.++|++++||.|.+  |++.|.....|..|+++|.+ ++|+|..|.+...
T Consensus        16 ~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~~   64 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQ   64 (88)
T ss_dssp             CCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCCC
T ss_pred             cccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchhhhHHH
Confidence            345789999999976  99999999999999999998 9999998875443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=5.4e-09  Score=54.45  Aligned_cols=33  Identities=24%  Similarity=0.477  Sum_probs=30.5

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++|++++||.|.+  |++.|.....|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcC
Confidence            4688999999976  99999999999999999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.66  E-value=1.6e-08  Score=51.85  Aligned_cols=32  Identities=31%  Similarity=0.533  Sum_probs=29.4

Q ss_pred             HhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       184 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +|++++||.|.+  |++.|...+.|..|+++|++
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcC
Confidence            367899999976  99999999999999999987

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=2e-08  Score=52.58  Aligned_cols=35  Identities=29%  Similarity=0.532  Sum_probs=31.1

Q ss_pred             cCCCCCeecc--cccccccCchHHHhHHHHhcCCCCe
Q psy9360         157 HLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       157 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      |.++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678899999  5999999999999999999998886

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.9e-08  Score=51.89  Aligned_cols=33  Identities=21%  Similarity=0.340  Sum_probs=28.3

Q ss_pred             hcCCCCCeeccc--ccccccCchHHHhHHHHhcCC
Q psy9360         156 CHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       156 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      .+.+++||.|+.  |++.|...+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            357788999986  999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.1e-08  Score=52.15  Aligned_cols=31  Identities=23%  Similarity=0.502  Sum_probs=15.4

Q ss_pred             cCCCCCeecccccccccCc-hHHHhHHHHhcC
Q psy9360         157 HLDSKPYSCHVCGRSFISN-THKNNHLRIHYG  187 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~  187 (236)
                      |.++++|.|+.|++.|... ..|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            4444455555555555554 455555555444

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.63  E-value=2e-08  Score=51.48  Aligned_cols=35  Identities=20%  Similarity=0.555  Sum_probs=32.3

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  190 (236)
                      +|.++++|.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            37789999999999999999999999999998875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.8e-08  Score=51.23  Aligned_cols=30  Identities=30%  Similarity=0.425  Sum_probs=14.6

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |++++||.|.+  |++.|.....|..|+++|.
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            4 GSSGKPYKCPQ--CSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             SCCCCSEECSS--SSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCC--CCcccCCHHHHHHHHHHcc
Confidence            34444555533  5555555555555555444

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.7e-08  Score=51.35  Aligned_cols=31  Identities=29%  Similarity=0.494  Sum_probs=15.9

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |++++||+|.+  |++.|.....|..|+++|.+
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSL--CEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSS--SSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCC--CCchhCCHHHHHHHHHHhcc
Confidence            44455555533  55555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=5.3e-09  Score=57.80  Aligned_cols=35  Identities=20%  Similarity=0.451  Sum_probs=17.8

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ..|++++||.|.++.|++.|...+.|.+|+++|.+
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            34555555555311355555555555555555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=4e-08  Score=50.64  Aligned_cols=32  Identities=25%  Similarity=0.438  Sum_probs=15.6

Q ss_pred             cCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      |.++++|.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34444455555555555555555555554443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.1e-08  Score=51.11  Aligned_cols=31  Identities=29%  Similarity=0.546  Sum_probs=16.6

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |++++||.|.+  |++.|...+.|..|+++|.+
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHI--CERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSS--SCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCC--CCCccCCHHHHHHHHHHhcC
Confidence            44455555543  55555555555555555543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=6.5e-08  Score=49.85  Aligned_cols=29  Identities=34%  Similarity=0.571  Sum_probs=14.6

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .+++||.|.+  |++.|.....|..|+++|.
T Consensus         5 ~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            5 SSGKIFTCEY--CNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             SCCCCEECTT--TCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCEECCC--CCceeCCHHHHHHHHHHhC
Confidence            3445555533  5555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=2.6e-08  Score=51.86  Aligned_cols=31  Identities=23%  Similarity=0.404  Sum_probs=15.6

Q ss_pred             HhcCCCCeeccccccccccCChhhHHHH-HHhhc
Q psy9360         184 IHYGLKPYVCHVEGCKRKFVDLSSLKKH-TKIHT  216 (236)
Q Consensus       184 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~  216 (236)
                      +|++++||.|..  |++.|...+.|..| +++|.
T Consensus         3 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSS--SSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCC--CCcccCCHHHHHHHHHHHcc
Confidence            344455555533  55555555555555 44444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.54  E-value=5.6e-08  Score=49.13  Aligned_cols=31  Identities=23%  Similarity=0.531  Sum_probs=28.2

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC-Cccc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFH  221 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~  221 (236)
                      +||.|.+  |++.|...+.|..|+++|.+ ++|.
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5899966  99999999999999999998 8875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=7.4e-08  Score=50.05  Aligned_cols=32  Identities=31%  Similarity=0.619  Sum_probs=15.5

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++++||.|.++.|++.|...+.|.+|+++|.+
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44455555311355555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.51  E-value=5e-08  Score=50.22  Aligned_cols=25  Identities=24%  Similarity=0.482  Sum_probs=15.7

Q ss_pred             cCCCCeeccccccccccCChhhHHHHH
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHT  212 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~  212 (236)
                      .+++||+|..  |+++|...+.|.+|+
T Consensus         4 ~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCccCeECCC--CCCccCCHhHccCcC
Confidence            4566666643  666666666666666

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=3.2e-08  Score=51.51  Aligned_cols=34  Identities=21%  Similarity=0.383  Sum_probs=31.2

Q ss_pred             hhcCCCCCeecccccccccCchHHHhH-HHHhcCC
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNH-LRIHYGL  188 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  188 (236)
                      ++|.+++||.|+.|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            468899999999999999999999999 8999864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=8.6e-08  Score=49.33  Aligned_cols=34  Identities=35%  Similarity=0.556  Sum_probs=31.4

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      +|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5788999999999999999999999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.48  E-value=6.2e-08  Score=53.64  Aligned_cols=31  Identities=26%  Similarity=0.589  Sum_probs=15.9

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHH-hhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTK-IHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~  217 (236)
                      |++++||.|.+  |++.|.....|.+|++ +|.+
T Consensus         2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence            44455555543  5555555555555555 4544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.47  E-value=2.6e-08  Score=54.92  Aligned_cols=39  Identities=15%  Similarity=0.317  Sum_probs=29.9

Q ss_pred             HHhHhhcCCCCCeecc--cccccccCchHHHhHHHHhcCCC
Q psy9360         151 QIHERCHLDSKPYSCH--VCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       151 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      ..|...|.+++||.|.  .||+.|...+.|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445567888888885  68888888888888888887763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1e-07  Score=49.07  Aligned_cols=34  Identities=24%  Similarity=0.454  Sum_probs=31.3

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      .|.+++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5788999999999999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=2.1e-07  Score=54.96  Aligned_cols=39  Identities=18%  Similarity=0.387  Sum_probs=19.6

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHhhcCCcccCCccc
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTFHCNLCN  226 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~  226 (236)
                      .+++||+|..  |++.|.....|.+|+++|++....+..++
T Consensus         9 ~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A            9 REAGILPCGL--CGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CCccCcCCCC--CCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            3445555533  55555555555555555555333444433

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=6.5e-08  Score=50.20  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=29.8

Q ss_pred             HHhcCCCCeeccccccccccCCh-hhHHHHHHhhcC
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDL-SSLKKHTKIHTQ  217 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~h~~  217 (236)
                      ++|++++||.|.+  |++.|... +.|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCC
Confidence            3578899999976  99999999 999999999976

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.44  E-value=5.6e-08  Score=50.03  Aligned_cols=31  Identities=29%  Similarity=0.634  Sum_probs=26.0

Q ss_pred             cCCCCCeecccccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      +.+++||.|++||++|...+.|..|+       ||.|.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCS   33 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTST
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECc
Confidence            46788999999999999999999998       67663

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.4e-07  Score=48.60  Aligned_cols=34  Identities=24%  Similarity=0.537  Sum_probs=31.1

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      .|.++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4778899999999999999999999999998764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.43  E-value=1.6e-07  Score=48.73  Aligned_cols=33  Identities=33%  Similarity=0.653  Sum_probs=28.3

Q ss_pred             cCCCCCeeccc--ccccccCchHHHhHHHHhcCCC
Q psy9360         157 HLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       157 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      |.++++|.|.+  ||+.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67788999984  9999999999999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.42  E-value=1.2e-07  Score=52.50  Aligned_cols=35  Identities=23%  Similarity=0.555  Sum_probs=29.8

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHH-HhcCCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLR-IHYGLKP  190 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  190 (236)
                      +|.++++|.|.+||+.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4789999999999999999999999999 9988754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.42  E-value=7e-09  Score=52.19  Aligned_cols=30  Identities=13%  Similarity=0.551  Sum_probs=17.1

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCCe
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      ||.|++||+.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555555555555555555555555554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.1e-07  Score=47.87  Aligned_cols=34  Identities=29%  Similarity=0.524  Sum_probs=31.0

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      .|.++++|.|+.|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678899999999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.41  E-value=1.7e-07  Score=45.52  Aligned_cols=26  Identities=23%  Similarity=0.657  Sum_probs=12.7

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|+.||+.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            34455555555544445555444443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.6e-07  Score=48.31  Aligned_cols=32  Identities=31%  Similarity=0.538  Sum_probs=29.2

Q ss_pred             HhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       184 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +|+++++|.|.+  |++.|.....|..|+++|.+
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcC
Confidence            467899999976  99999999999999999986

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.40  E-value=1.9e-07  Score=45.67  Aligned_cols=26  Identities=42%  Similarity=0.842  Sum_probs=12.5

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +||.|..  |++.|.....|..|+++|.
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHTTC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHHhc
Confidence            3445533  5555555555555554444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.39  E-value=2.6e-07  Score=44.80  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=13.5

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|++||+.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            44555555555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.37  E-value=3.3e-07  Score=44.72  Aligned_cols=27  Identities=15%  Similarity=0.424  Sum_probs=14.9

Q ss_pred             CeecccccccccCchHHHhHHHHhcCC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +|.|..||+.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            455555555555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=2.9e-07  Score=44.55  Aligned_cols=27  Identities=26%  Similarity=0.487  Sum_probs=15.0

Q ss_pred             CeecccccccccCchHHHhHHHHhcCC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=2.7e-07  Score=44.68  Aligned_cols=26  Identities=42%  Similarity=0.976  Sum_probs=13.0

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|.+|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            34555555555555555555555444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.32  E-value=4.7e-07  Score=45.07  Aligned_cols=26  Identities=35%  Similarity=0.758  Sum_probs=12.2

Q ss_pred             Ceecc--cccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCH--VCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|.  .||+.|.....|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44444  444444444444444444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=4.2e-07  Score=43.31  Aligned_cols=25  Identities=36%  Similarity=0.895  Sum_probs=14.8

Q ss_pred             CCeeccccccccccCChhhHHHHHHhh
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      +||.|..  |++.|...+.|..|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHc
Confidence            4566643  666666666666666555

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.29  E-value=4.1e-07  Score=44.97  Aligned_cols=19  Identities=32%  Similarity=0.807  Sum_probs=9.5

Q ss_pred             cccccCChhhHHHHHHhhc
Q psy9360         198 CKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       198 C~~~f~~~~~l~~H~~~h~  216 (236)
                      |++.|...+.|..|+++|+
T Consensus        10 C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A           10 CGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTS
T ss_pred             CCcccCCHhHHHHHHHHhc
Confidence            5555555555555554444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=4.5e-07  Score=43.58  Aligned_cols=26  Identities=35%  Similarity=0.897  Sum_probs=17.4

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +||.|.+  |++.|...+.|..|+++|+
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            5667744  7777777777777776665

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=5.8e-07  Score=53.07  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=28.0

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      .+.+++||.|.+|++.|.....|..|+++|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3566788888888888888888888888888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=1.1e-07  Score=46.26  Aligned_cols=26  Identities=35%  Similarity=0.820  Sum_probs=12.7

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|+.||+.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            34455555555554455555544443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=6.1e-07  Score=42.71  Aligned_cols=27  Identities=33%  Similarity=0.636  Sum_probs=24.9

Q ss_pred             CCCeecccccccccCchHHHhHHHHhc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      ++||.|+.||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999884

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4.6e-07  Score=43.23  Aligned_cols=25  Identities=32%  Similarity=0.752  Sum_probs=17.2

Q ss_pred             CCeeccccccccccCChhhHHHHHHhh
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      +||.|..  |++.|...+.|.+|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            5677754  777777777777777665

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4.2e-07  Score=43.67  Aligned_cols=28  Identities=43%  Similarity=0.993  Sum_probs=22.9

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcC
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      +++|.|++|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3678888888888888888888888753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=3.4e-07  Score=43.72  Aligned_cols=27  Identities=30%  Similarity=0.577  Sum_probs=22.3

Q ss_pred             CCCeecccccccccCchHHHhHHHHhc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      ++||.|+.||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            367888889988988888888888763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=45.89  Aligned_cols=26  Identities=42%  Similarity=0.860  Sum_probs=11.8

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|..||+.|.....|..|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            34444444444444444444444433

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=1.1e-06  Score=42.79  Aligned_cols=30  Identities=50%  Similarity=0.808  Sum_probs=27.4

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcCCC
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      ++||.|..||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.20  E-value=5.8e-07  Score=42.70  Aligned_cols=19  Identities=42%  Similarity=0.990  Sum_probs=9.7

Q ss_pred             cccccCChhhHHHHHHhhc
Q psy9360         198 CKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       198 C~~~f~~~~~l~~H~~~h~  216 (236)
                      |++.|...+.|.+|+++|.
T Consensus         7 C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            7 CERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             SCCBCSSHHHHHHHGGGTC
T ss_pred             CCCcCCCHHHHHHHHHHcC
Confidence            5555555555555555443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.20  E-value=1.7e-07  Score=46.93  Aligned_cols=30  Identities=33%  Similarity=0.408  Sum_probs=17.9

Q ss_pred             CcccccCccccCCchhHHhhhhhhcCCCCc
Q psy9360         104 PFGCRYCDKAFKTSGDLSKHSAIHNGDRPY  133 (236)
Q Consensus       104 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  133 (236)
                      ||.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            456666666666666666666666555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=7.7e-07  Score=43.43  Aligned_cols=26  Identities=35%  Similarity=0.777  Sum_probs=13.1

Q ss_pred             CeecccccccccCchHHHhH-HHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNH-LRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  187 (236)
                      ||.|+.||+.|...+.|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            44555555555555555555 344444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.17  E-value=3.5e-06  Score=49.42  Aligned_cols=27  Identities=26%  Similarity=0.433  Sum_probs=22.0

Q ss_pred             CeeccccccccccCChhhHHHHHHhhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +|.|.+.+|++.+.....|..|+++.+
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccccC
Confidence            688887788888888888888888653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.16  E-value=1.4e-06  Score=43.28  Aligned_cols=30  Identities=37%  Similarity=0.784  Sum_probs=25.9

Q ss_pred             CCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       188 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++||.|.++.|++.|...+.|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            478999612499999999999999999986

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.15  E-value=1.4e-06  Score=42.11  Aligned_cols=27  Identities=22%  Similarity=0.599  Sum_probs=24.8

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|..  |++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcC
Confidence            5899965  99999999999999999986

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.14  E-value=1.3e-06  Score=43.04  Aligned_cols=29  Identities=34%  Similarity=0.807  Sum_probs=26.5

Q ss_pred             CCeecc--cccccccCchHHHhHHHHhcCCC
Q psy9360         161 KPYSCH--VCGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       161 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      +||.|+  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            579998  99999999999999999998864

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=1.8e-06  Score=41.62  Aligned_cols=27  Identities=41%  Similarity=0.890  Sum_probs=24.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|.+  |++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcC
Confidence            4799966  99999999999999999986

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.12  E-value=5.8e-06  Score=48.47  Aligned_cols=53  Identities=21%  Similarity=0.390  Sum_probs=33.5

Q ss_pred             cccccCcccccccchhhHHHhH-hhcCCCC------Ceecc--cccccccCchHHHhHHHHh
Q psy9360         133 YKCNYTSCGRHFRTHTQRQIHE-RCHLDSK------PYSCH--VCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       133 ~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  185 (236)
                      +.|.|..|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4566666777777777777775 3565544      56665  5766666666677776653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.10  E-value=2.2e-06  Score=41.60  Aligned_cols=27  Identities=37%  Similarity=0.645  Sum_probs=24.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|..  |++.|...+.|..|+++|++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHcc
Confidence            4799965  99999999999999999986

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.1e-07  Score=42.91  Aligned_cols=24  Identities=46%  Similarity=1.005  Sum_probs=13.2

Q ss_pred             CeeccccccccccCChhhHHHHHHhh
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      ||.|..  |++.|...+.|..|+++|
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            455533  555555555555555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=2.2e-06  Score=41.25  Aligned_cols=27  Identities=33%  Similarity=0.785  Sum_probs=24.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|..  |++.|.....|..|+++|.+
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcC
Confidence            5799966  99999999999999999976

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.04  E-value=3.2e-06  Score=40.69  Aligned_cols=27  Identities=56%  Similarity=1.020  Sum_probs=17.1

Q ss_pred             CeeccccccccccCChhhHHHHHHhhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      ||.|.++.|++.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            566641137777777777777777665

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.04  E-value=2.2e-06  Score=40.59  Aligned_cols=26  Identities=35%  Similarity=0.844  Sum_probs=23.3

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ||.|..||+.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            58999999999999999999999864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=6.9e-07  Score=42.08  Aligned_cols=26  Identities=42%  Similarity=0.998  Sum_probs=23.5

Q ss_pred             CCeecccccccccCchHHHhHHHHhc
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      +||.|++||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999998874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=2.7e-06  Score=40.87  Aligned_cols=27  Identities=41%  Similarity=0.714  Sum_probs=24.6

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|..  |++.|.....|..|+++|++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhcc
Confidence            5899966  99999999999999999976

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=8.1e-07  Score=43.02  Aligned_cols=27  Identities=41%  Similarity=0.735  Sum_probs=24.5

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|.+  |++.|...+.|..|+++|++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            4799966  99999999999999999976

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.21  E-value=1e-06  Score=42.92  Aligned_cols=28  Identities=50%  Similarity=1.079  Sum_probs=25.3

Q ss_pred             CCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       188 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++||.|..  |++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIH--CQRQFADPGALQRHVRIHTG   28 (30)
Confidence            46899966  99999999999999999976

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.94  E-value=4.4e-06  Score=40.14  Aligned_cols=27  Identities=48%  Similarity=0.896  Sum_probs=22.8

Q ss_pred             CCeecc--cccccccCchHHHhHHHHhcC
Q psy9360         161 KPYSCH--VCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       161 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ++|.|.  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468888  999999999999999988863

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.84  E-value=1e-05  Score=39.19  Aligned_cols=19  Identities=32%  Similarity=0.852  Sum_probs=8.1

Q ss_pred             cccccCccccCCchhHHhh
Q psy9360         105 FGCRYCDKAFKTSGDLSKH  123 (236)
Q Consensus       105 ~~C~~C~~~f~~~~~l~~H  123 (236)
                      |.|..|++.|.....|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            3444444444444444444

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.37  E-value=0.00071  Score=44.66  Aligned_cols=29  Identities=31%  Similarity=0.418  Sum_probs=17.8

Q ss_pred             HhcCCCCeeccccccccccCChhhHHHHHHh
Q psy9360         184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       184 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      .|+|++||.|..  |++.|.+.+.|..|+++
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            455566666644  66666666666666653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.33  E-value=0.0005  Score=46.13  Aligned_cols=21  Identities=19%  Similarity=0.390  Sum_probs=14.6

Q ss_pred             ceeecCCCCCcccCChHHHHHHH
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHA   96 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~   96 (236)
                      ++.|  ..|...|.+.+.+..|.
T Consensus        32 ~~~C--~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           32 DTQC--KVCSAVLISESQKLAHY   52 (127)
T ss_dssp             SSEE--TTTTEECCSHHHHHHHH
T ss_pred             CCcC--cCCCCEeCCHHHHHHHH
Confidence            4667  77777777777777776

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.30  E-value=0.00063  Score=44.94  Aligned_cols=29  Identities=28%  Similarity=0.438  Sum_probs=23.6

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHH
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                      .|+|.++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            46777888888888888888888888763

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.26  E-value=0.0053  Score=41.06  Aligned_cols=75  Identities=17%  Similarity=0.275  Sum_probs=45.5

Q ss_pred             CCcccccCcccccccchhhHHHhH--hhcCCC-CCeeccc------ccccccCchHHHhHHHHhcCCCCeeccccccccc
Q psy9360         131 RPYKCNYTSCGRHFRTHTQRQIHE--RCHLDS-KPYSCHV------CGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRK  201 (236)
Q Consensus       131 ~~~~C~~~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  201 (236)
                      +++.|.  .|...|.+...+..|.  +.|... +.+.+..      =+..+....    +...+.+...|.|.+  |.+.
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~--C~~~  102 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV--CNMT  102 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT--TTEE
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC--CCCE
Confidence            567788  4888888888888887  344221 1122210      011222111    112344566789977  9999


Q ss_pred             cCChhhHHHHHH
Q psy9360         202 FVDLSSLKKHTK  213 (236)
Q Consensus       202 f~~~~~l~~H~~  213 (236)
                      |.+...|..|..
T Consensus       103 f~s~~~~~~H~~  114 (127)
T 1zu1_A          103 FSSPVVAESHYI  114 (127)
T ss_dssp             CSSHHHHHHHHT
T ss_pred             eCCHHHHHHHHC
Confidence            999999999985

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.18  E-value=0.0085  Score=42.24  Aligned_cols=73  Identities=18%  Similarity=0.332  Sum_probs=38.5

Q ss_pred             cccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         139 SCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       139 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      .|+.... ...+..|.. .-.-++..|+.|+..+. ...|..|....-..++-.|+.  |+..+. ...|..|..++.|
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~~-r~~l~~H~~~~C~~r~~~C~~--C~~~~~-~~~l~~H~~~~~~  161 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPFQ-KFHINIHILKDCPRRQVSCDN--CAASMA-FEDKEIHDQNCPL  161 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEEE-GGGHHHHHHHTCTTCEEECTT--TCCEEE-GGGHHHHHTTCCC
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHHH-HHHHHHHhhhhCCCCCeECCC--CCCccC-HHHHHhHHHhCcC
Confidence            3544432 334555543 22234456666666553 345666666555556666654  666553 3456666666554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.39  E-value=0.0097  Score=31.52  Aligned_cols=23  Identities=17%  Similarity=0.326  Sum_probs=18.2

Q ss_pred             CCeecccccccccCchHHHhHHH
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      -+|.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            35788888888888888888887

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.33  E-value=0.026  Score=29.90  Aligned_cols=25  Identities=20%  Similarity=0.387  Sum_probs=21.8

Q ss_pred             CCeeccccccccccCChhhHHHHHHhh
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      .+|.|+-  |+..|.....|+.||+--
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhhhc
Confidence            5699965  999999999999999843

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.80  E-value=0.074  Score=37.35  Aligned_cols=148  Identities=17%  Similarity=0.132  Sum_probs=90.5

Q ss_pred             ccccCCCcccccCCcCCCccCCCCCCCcccccchhhHHhhhhhHHHHhhhhhhhhhhhccCCceeecCCCCCcccCChH-
Q psy9360          12 FRNMFGGDEVCWESTNSGWSNNGFNQNTRTASNDIYAEHLQLSEEIMKKSLQEDEKIFEKEKLHVCTYEDCNSVFQTQA-   90 (236)
Q Consensus        12 ~~~~~~~~~~C~~c~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~~~C~~~f~~~~-   90 (236)
                      +....+..+.|..|...+.....      ....-. -|..|........             ...|  +.|...+.... 
T Consensus        11 ~~~~~~~~~~C~IC~~~~~~pv~------~~CgH~-fC~~Ci~~~~~~~-------------~~~C--P~Cr~~~~~~~~   68 (170)
T 3hcs_A           11 FDPPLESKYECPICLMALREAVQ------TPCGHR-FCKACIIKSIRDA-------------GHKC--PVDNEILLENQL   68 (170)
T ss_dssp             ESSCCCGGGBCTTTCSBCSSEEE------CTTSCE-EEHHHHHHHHHHH-------------CSBC--TTTCCBCCGGGC
T ss_pred             hccCCCCCCCCCCCChhhcCcEE------CCCCCH-HHHHHHHHHHHhC-------------CCCC--CCCccCcchhhh
Confidence            44556778999999988764211      111111 1333333322111             1268  88987765532 


Q ss_pred             ----HHHHHHhhcCCCCCccc--ccCccccCCchhHHhhhhhhcCCCCcccccCcccccccchhhHHHhHhhcCCCCCee
Q psy9360          91 ----EWEEHARMHAVQRPFGC--RYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYS  164 (236)
Q Consensus        91 ----~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  164 (236)
                          .+..-+.    +....|  .-|+..+. ...|..|.. .-.-.+..|+  .|+..+ ....|..|....-..+...
T Consensus        69 ~~~~~~~~~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~--~C~~~~-~r~~l~~H~~~~C~~r~~~  139 (170)
T 3hcs_A           69 FPDNFAKREIL----SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCP--QCQRPF-QKFHINIHILKDCPRRQVS  139 (170)
T ss_dssp             EECHHHHHHHH----TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECT--TTCCEE-EGGGHHHHHHHTCTTCEEE
T ss_pred             hhhHHHHHHHh----hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECC--CCChHH-HHHHHHHHhhhhCCCCCeE
Confidence                1222221    234567  45776654 456778863 3344567888  799888 6678999998777778899


Q ss_pred             cccccccccCchHHHhHHHHhcCCCCe
Q psy9360         165 CHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       165 C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      |+.|+..+.. ..|..|..++.|+.++
T Consensus       140 C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          140 CDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             CTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             CCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            9999998876 5789999988887654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.64  E-value=0.16  Score=25.02  Aligned_cols=24  Identities=21%  Similarity=0.314  Sum_probs=16.8

Q ss_pred             CeecccccccccCchHHHhHHHHh
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      .|.|++|.+.|.+...|..|....
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            467777777777777777776543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.08  E-value=0.15  Score=30.46  Aligned_cols=38  Identities=21%  Similarity=0.557  Sum_probs=17.2

Q ss_pred             eecccccccccCchHHHhHHHHhcCCCCeeccccccccccC
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFV  203 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  203 (236)
                      |.|..||.++.- ..+..|...-.+-..|.|  -+|++.|.
T Consensus        11 F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SC--IDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVKK-IQVEKHVSNCRNCECLSC--IDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEET-THHHHHHHHCTTCCEEEE--TTTTEEEE
T ss_pred             EEcCCCCCeeec-ccchhHHhhCCCCCcEEe--cccCCeeC
Confidence            445555544442 344555443333234555  34555554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.01  E-value=0.35  Score=23.80  Aligned_cols=25  Identities=20%  Similarity=0.444  Sum_probs=22.1

Q ss_pred             CeeccccccccccCChhhHHHHHHhhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .|.|++  |-+.|.+...|..|-...|
T Consensus         5 GFiCP~--C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQ--CMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTT--TCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcH--HHHHcCCHHHHHHHHHhcc
Confidence            499977  9999999999999998654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.16  E-value=1  Score=22.31  Aligned_cols=23  Identities=17%  Similarity=0.417  Sum_probs=12.2

Q ss_pred             CeeccccccccccCChhhHHHHHHh
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      ++.|..  |.-+|....++..|++.
T Consensus         8 ~~~C~~--C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            8 KKYCST--CDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CSEETT--TTEECSSHHHHHHHHHH
T ss_pred             cCeecc--ccceehhhHHHhhhhee
Confidence            355533  55555555555555543

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=81.15  E-value=1  Score=26.79  Aligned_cols=13  Identities=23%  Similarity=0.524  Sum_probs=8.2

Q ss_pred             cccccCccccCCc
Q psy9360         105 FGCRYCDKAFKTS  117 (236)
Q Consensus       105 ~~C~~C~~~f~~~  117 (236)
                      -+|++||......
T Consensus         9 ~~~PlCG~~L~W~   21 (95)
T 2k5c_A            9 AKCPICGSPLKWE   21 (95)
T ss_dssp             EECSSSCCEECHH
T ss_pred             ccCCcCCCccCHH
Confidence            4677777776543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=81.04  E-value=0.9  Score=27.71  Aligned_cols=26  Identities=38%  Similarity=0.695  Sum_probs=16.7

Q ss_pred             CeecccccccccCchHHHhHHHHhcCCCC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  190 (236)
                      ...|-+||+.|..   |..|+.++++..|
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             ceEecccchhhHH---HHHHHHHccCCCH
Confidence            3567777777663   5677777656554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=80.34  E-value=1.5  Score=26.13  Aligned_cols=46  Identities=22%  Similarity=0.443  Sum_probs=23.1

Q ss_pred             ceeecCCCCCcccCChHHHHHHHhhcCCCCCcccccCccccCCchhHHhh
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKH  123 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  123 (236)
                      .|.|  ..|+.++.. ..+..|...-.+...|.|..|++.|.. ..++.|
T Consensus        10 ~F~C--~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTC--NACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEE--SSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEc--CCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            3555  666655433 455555443333334566666666653 334444

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=80.33  E-value=2.7  Score=20.81  Aligned_cols=26  Identities=19%  Similarity=0.186  Sum_probs=22.2

Q ss_pred             CCCeecccccccccCchHHHhHHHHh
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      ...+.|..|+..|.+...+..|.+--
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            34689999999999999999998743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	236
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d2glia5	29	g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo	3e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	5e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	6e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.004
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 1e-06
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 101 VQRPFGCRYCDKAFKTSGDLSKHS-AIHNGDRPYKCN 136
           V +P+ C+ C K F     L+ H   +H  +RP+KC 
Sbjct: 2   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 1e-06
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLR-IHYGLKPYVCHV 195
           KPY C  CG+ F    H N H++ +H   +P+ C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)

Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERC-HLDSKPYSCHV 167
            +PY C    CG+ F        H +  H   +P+ C V
Sbjct: 3   GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 3e-06
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
           D+ Y C    CG+ F   +QR  H   HL  +PY C VCG+ F    H   H++IH
Sbjct: 1   DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIH 215
           K Y C  CG+SF   + ++ H+ +H GL+PY C V  C +KF     L  H KIH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.002
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCH 157
           + + C+ C K+F       +H ++H G RPY C    CG+ F+       H + H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.003
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 72  EKLHVCTYEDCNSVFQTQAEWEEHARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
           +KL+ C    C   F  +++ + H  MH   RP+GC  C K FK    L  H  IH
Sbjct: 1   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQQT 219
           +PY C   GC + FV    L +H K H ++ 
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 130 DRPYKCNYTSCGRHFRTHTQRQIHERCH 157
           DRPY C++  C + F  +     H++ H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 4e-05
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 107 CRYCDKAFKTSGDLSKHSAIHNGDRPYKCNY 137
              C K+F     L +H  +H+  R Y C +
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 133 YKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSC 165
           + C   +CG+ F      + H + H D++ Y C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 4e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 164 SCHVCGRSFISNTHKNNHLRIHYGLKPYVC 193
               CG+SF    H   H+++H   + Y+C
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +PYVC  +GC +KF   ++LK H   H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYG 187
           KP+ C +C R+F  + H   H+R H G
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.004
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 102 QRPFGCRYCDKAFKTSGDLSKHSAIHNG 129
           Q+PF CR C + F  S  L+ H   H G
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYG 187
           H   KPY C  CG++F  ++    H R+H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 6e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           IH G KPY C    C + F   S L +H ++HT
Sbjct: 1   IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 7e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 126 IHNGDRPYKCNYTSCGRHFRTHTQRQIHERCH 157
           IH+G++PY C    CG+ F   +    H+R H
Sbjct: 1   IHSGEKPYGCVE--CGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 98  MHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNG 129
           +H+ ++P+GC  C KAF  S  L +H  +H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           + + C VC R+F    H   H R H   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 103 RPFGCRYCDKAFKTSGDLSKHSAIHNGDR 131
           R F C  C +AF     L +H   H  ++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 3e-04
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +P++C    C ++F     L++H + HT
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHT 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCH 157
           RP+ C ++ CG+ F    + Q H+R H
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 3e-04
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIH 215
           KPYVC + GC +++ D SSL+KH K  
Sbjct: 1   KPYVCKLPGCTKRYTDPSSLRKHVKTV 27

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 5e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH 185
             R     KP+ C  C RSF  + H   H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
             R   G+KP+ C    C R F     L  H K H 
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.002
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 95  HARMHAVQRPFGCRYCDKAFKTSGDLSKHSAIH 127
             R     +PF C  CD++F  S  L+ H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 123 HSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCHL 158
            +    G +P++C    C R F       +H + H+
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM 35

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 5e-04
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           KP+ C  EGC++ +  L +LK H + HT
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCH 157
           +P+KC +  C + +      + H R H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 6e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG 187
           R H   KPY+C  C ++F      + H + ++ 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 6e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 97  RMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNG 129
           R H  ++P+ C +CDK F+    L  H   ++ 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 9e-04
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)

Query: 183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQTF 220
           R H G KPY C    C + F     L  H K +    F
Sbjct: 1   RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNF 36

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.2 bits (79), Expect = 6e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +PY C VE C R+F   + L +H +IHT
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 11/27 (40%), Positives = 11/27 (40%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCH 157
           RPY C   SC R F        H R H
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIHYGLK 189
           K ++C  C + F+ + H + H++ H   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 10/36 (27%), Positives = 12/36 (33%), Gaps = 2/36 (5%)

Query: 181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
                   + Y C   G    F   S L KH + HT
Sbjct: 3   SEWQQRERRRYKCDECGK--SFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.002
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 10/47 (21%)

Query: 141 GRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG 187
           GR      +R          + Y C  CG+SF  ++  + H R H G
Sbjct: 1   GRSEWQQRER----------RRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.002
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 161 KPYSCHVCGRSFISNTHKNNHLRIH 185
           KPY C  CG++F  N+   NH RIH
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           KP+ C  EGC ++F    +L+ H +IHT
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.004
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 131 RPYKCNYTSCGRHFRTHTQRQIHERCH 157
           +P++C +  CG+ F      + H R H
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.6 bits (74), Expect = 0.003
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT 216
           +        K + C   GC + F    +++ H + H 
Sbjct: 8   DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL 44

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.6 bits (74), Expect = 0.003
 Identities = 6/36 (16%), Positives = 14/36 (38%)

Query: 122 KHSAIHNGDRPYKCNYTSCGRHFRTHTQRQIHERCH 157
                   D+ ++C +  C + F+     + H + H
Sbjct: 8   DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 97  RMHAVQRPFGCRYCDKAFKTSGDLSKHSAIHNGD 130
           R H+ ++P+ C  C   F  SG +  H    + +
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	236
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.71
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.28
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.23
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.21
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.19
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.15
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.14
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.12
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.11
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.1
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.08
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.03
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.99
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.99
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.98
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.96
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.96
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.93
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.92
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.88
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.82
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.57
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.17
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.12
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.97
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.95
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.93
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.83
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.72
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.71
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.71
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.71
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.7
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.69
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.62
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.62
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.54
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.47
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.38
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.3
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.28
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.26
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.18
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.17
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.12
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.08
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.84
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.82
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.82
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.79
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.73
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.7
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.59
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.54
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.53
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.41
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.41
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.36
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.35
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.22
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.2
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.19
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.17
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.07
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.85
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.41
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.21
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.2
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.18
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.0
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.87
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.78
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.78
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.66
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.55
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.17
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.13
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.79
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.68
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.52
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.48
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.16
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.65
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.14
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.4
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.44
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	88.38
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.32
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.04
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	85.94
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.02
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.21
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.24

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.6e-18  Score=95.87  Aligned_cols=53  Identities=43%  Similarity=0.956  Sum_probs=49.7

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcCCCCeeccccccccccCChhhHHHHHHhh
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      ++||.|+ ||+.|.....|..|+++|++++||.|..  |++.|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            5899994 9999999999999999999999999965  999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.4e-16  Score=87.22  Aligned_cols=53  Identities=42%  Similarity=0.949  Sum_probs=41.2

Q ss_pred             CCCcccccCcccccccchhhHHHhHhhcCCCCCeecccccccccCchHHHhHHHHh
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHERCHLDSKPYSCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      |++|.|.   ||+.|.....|..|+++|.+++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C~---Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT---TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC---CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4677774   7888888888888877888888888888888888888888887765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.4e-13  Score=69.57  Aligned_cols=35  Identities=37%  Similarity=0.930  Sum_probs=19.0

Q ss_pred             CCCeecccccccccCchHHHhHHH-HhcCCCCeecc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLR-IHYGLKPYVCH  194 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  194 (236)
                      ++||.|.+||+.|...+.|..|++ +|++++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345555555555555555555543 45555555553

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.9e-13  Score=70.17  Aligned_cols=35  Identities=31%  Similarity=0.663  Sum_probs=16.6

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcC
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      |+++|.+++||.|++||++|...++|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            34444444444444444444444444444444444

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.1e-12  Score=64.46  Aligned_cols=31  Identities=42%  Similarity=0.759  Sum_probs=17.6

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |++++||+|..  |+++|...+.|.+|+++|+|
T Consensus         2 HTgekpy~C~~--Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSS--SCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCC--CCCEeCchHHhHhhccccCC
Confidence            55555555533  55555555555555555553

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-12  Score=65.65  Aligned_cols=35  Identities=34%  Similarity=0.601  Sum_probs=24.5

Q ss_pred             HHhcCCCCeeccccccccccCChhhHHHHHHhhcCCc
Q psy9360         183 RIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQT  219 (236)
Q Consensus       183 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  219 (236)
                      ++|++++||+|..  |+++|...+.|.+|+++|++..
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCCC
Confidence            3577777777754  7777777777777777776543

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=3.5e-12  Score=65.19  Aligned_cols=36  Identities=33%  Similarity=0.755  Sum_probs=32.5

Q ss_pred             CCCCeeccccccccccCChhhHHHHHH-hhcC-CcccCCc
Q psy9360         187 GLKPYVCHVEGCKRKFVDLSSLKKHTK-IHTQ-QTFHCNL  224 (236)
Q Consensus       187 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~C~~  224 (236)
                      .++||+|..  ||+.|...+.|.+|++ +|++ +||+|++
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            479999965  9999999999999986 7999 9999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=6.6e-13  Score=68.09  Aligned_cols=36  Identities=28%  Similarity=0.473  Sum_probs=33.6

Q ss_pred             hHHHHhcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         180 NHLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       180 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +|+++|++++||+|..  ||+.|...++|.+|+++|+|
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCC
Confidence            5788999999999965  99999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.1e-12  Score=62.35  Aligned_cols=33  Identities=36%  Similarity=0.740  Sum_probs=31.6

Q ss_pred             hcCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         156 CHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       156 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +|++++||.|.+||++|...+.|..|+++|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=1.6e-12  Score=66.14  Aligned_cols=34  Identities=35%  Similarity=0.609  Sum_probs=23.2

Q ss_pred             HHHHhcCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         181 HLRIHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       181 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |.++|++++||+|..  |+++|...+.|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCc
Confidence            456677777777744  7777777777777777664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.2e-12  Score=63.43  Aligned_cols=34  Identities=26%  Similarity=0.562  Sum_probs=30.8

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      ++|+|++||.|.+||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4789999999999999999999999999999865

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=6e-12  Score=63.95  Aligned_cols=35  Identities=31%  Similarity=0.508  Sum_probs=29.3

Q ss_pred             hHhhcCCCCCeecccccccccCchHHHhHHHHhcC
Q psy9360         153 HERCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       153 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      |.++|++++||.|++|++.|...+.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56788888888888888888888888888888854

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.4e-11  Score=61.31  Aligned_cols=31  Identities=32%  Similarity=0.788  Sum_probs=20.1

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |+|++||+|.+  |++.|..++.|.+|+++|.+
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCC
Confidence            45666666654  66666666666666666654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.7e-11  Score=61.48  Aligned_cols=33  Identities=27%  Similarity=0.696  Sum_probs=18.4

Q ss_pred             eeccccccccccCChhhHHHHHHhhcC-CcccCC
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHTQ-QTFHCN  223 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~C~  223 (236)
                      |.|+++.|++.|..++.|++|+++|+| +||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            455544555555555555555555555 555554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=2.1e-11  Score=60.57  Aligned_cols=32  Identities=22%  Similarity=0.645  Sum_probs=29.2

Q ss_pred             cCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         157 HLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       157 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      |+|++||.|.+|++.|...++|..|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68899999999999999999999999999865

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.10  E-value=2.2e-11  Score=57.97  Aligned_cols=27  Identities=33%  Similarity=0.719  Sum_probs=15.2

Q ss_pred             CeecccccccccCchHHHhHHHHhcCC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      ||.|++||+.|...+.|..|+++|+||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.5e-11  Score=57.12  Aligned_cols=28  Identities=25%  Similarity=0.702  Sum_probs=16.2

Q ss_pred             CCeecccccccccCchHHHhHHHHhcCC
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +||.|++||+.|...+.|..|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3555555555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.08  E-value=5.3e-12  Score=67.60  Aligned_cols=33  Identities=21%  Similarity=0.520  Sum_probs=18.3

Q ss_pred             hcCCCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         185 HYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       185 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |++++||.|.++.|++.|...+.|.+|+++|+|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            555555555444455555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=3.3e-11  Score=56.63  Aligned_cols=28  Identities=36%  Similarity=0.794  Sum_probs=18.2

Q ss_pred             CCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       188 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |+||+|.+  |++.|..++.|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            46666644  66666666666666666654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=3.2e-11  Score=56.65  Aligned_cols=28  Identities=39%  Similarity=0.946  Sum_probs=25.9

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcC
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ++||.|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5899999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.2e-11  Score=60.62  Aligned_cols=31  Identities=32%  Similarity=0.695  Sum_probs=20.7

Q ss_pred             HhcCCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         184 IHYGLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       184 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +|+|++||+|++  |++.|..+++|.+|++.++
T Consensus         2 ~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYI--CHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCC--CcccccchHHHHHHccccc
Confidence            566777777754  7777777777777765443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6.9e-11  Score=59.39  Aligned_cols=34  Identities=26%  Similarity=0.505  Sum_probs=28.9

Q ss_pred             hhcCCCCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         155 RCHLDSKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       155 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      ++|+|++||.|+.|++.|...++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4689999999999999999999999998765543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6.3e-11  Score=59.36  Aligned_cols=32  Identities=34%  Similarity=0.923  Sum_probs=25.7

Q ss_pred             eeccc--ccccccCchHHHhHHHHhcCCCCeecc
Q psy9360         163 YSCHV--CGRSFISNTHKNNHLRIHYGLKPYVCH  194 (236)
Q Consensus       163 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  194 (236)
                      |.|+.  ||++|.....|..|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56765  888888888888888888888888874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-10  Score=55.68  Aligned_cols=29  Identities=41%  Similarity=0.859  Sum_probs=24.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||+|+++.|+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            58888877888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-10  Score=56.18  Aligned_cols=29  Identities=28%  Similarity=0.768  Sum_probs=21.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|+++.|+++|...+.|.+|+++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            46777766777777777777777777776

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.1e-10  Score=53.35  Aligned_cols=25  Identities=44%  Similarity=0.883  Sum_probs=14.5

Q ss_pred             CCeeccccccccccCChhhHHHHHHhh
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      |||+|.  +||+.|..++.|.+|+++|
T Consensus         1 KPy~C~--eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCL--ECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHH
T ss_pred             CCccCC--CCcCeeccCcccccCccCC
Confidence            456663  3666666666666666655

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=3.9e-11  Score=64.14  Aligned_cols=41  Identities=15%  Similarity=0.383  Sum_probs=31.2

Q ss_pred             hhHHHhHhhcCCCCCeeccc--ccccccCchHHHhHHHHhcCCC
Q psy9360         148 TQRQIHERCHLDSKPYSCHV--CGRSFISNTHKNNHLRIHYGLK  189 (236)
Q Consensus       148 ~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  189 (236)
                      ..|..|++ |.+++||.|..  |++.|...+.|..|+++|++++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34555664 78888888866  8888888888888888888774

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=2.5e-10  Score=55.32  Aligned_cols=31  Identities=35%  Similarity=0.775  Sum_probs=25.6

Q ss_pred             CCCeeccccccccccCChhhHHHHHHhhcCC
Q psy9360         188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQQ  218 (236)
Q Consensus       188 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  218 (236)
                      |+||.|.++.|+++|...+.|.+|+++|.++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            5788888888888888888888888888753

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.9e-10  Score=54.89  Aligned_cols=29  Identities=41%  Similarity=0.858  Sum_probs=23.4

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|+++.|+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            57888777788888888888888888875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.8e-10  Score=54.41  Aligned_cols=29  Identities=45%  Similarity=0.999  Sum_probs=24.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|+++.|+++|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            58888888888889888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.93  E-value=2.8e-10  Score=54.02  Aligned_cols=27  Identities=41%  Similarity=0.890  Sum_probs=25.5

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|++  |+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccC
Confidence            6899976  99999999999999999997

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.8e-10  Score=51.96  Aligned_cols=26  Identities=50%  Similarity=0.944  Sum_probs=24.8

Q ss_pred             CCeecccccccccCchHHHhHHHHhc
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      +||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=3.4e-10  Score=53.63  Aligned_cols=27  Identities=33%  Similarity=0.754  Sum_probs=25.5

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|++  |+++|..++.|.+|+++|+|
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCC
Confidence            6899976  99999999999999999997

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.5e-10  Score=52.79  Aligned_cols=28  Identities=43%  Similarity=1.004  Sum_probs=24.0

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +||.|+++.|+++|...+.|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888888889999999999999988884

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.2e-09  Score=52.02  Aligned_cols=28  Identities=36%  Similarity=0.674  Sum_probs=22.3

Q ss_pred             CCeeccc--ccccccCchHHHhHHHHhcCC
Q psy9360         161 KPYSCHV--CGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       161 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +||.|+.  ||+.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-09  Score=52.21  Aligned_cols=28  Identities=39%  Similarity=0.883  Sum_probs=23.2

Q ss_pred             CCeeccc--ccccccCchHHHhHHHHhcCC
Q psy9360         161 KPYSCHV--CGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       161 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +||.|+.  ||++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788877  888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.2e-09  Score=51.07  Aligned_cols=31  Identities=26%  Similarity=0.608  Sum_probs=25.8

Q ss_pred             CceeecCCCCCcccCChHHHHHHHhhcCCCC
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHARMHAVQR  103 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  103 (236)
                      +||.|+++.|++.|...+.|.+|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            4788877888888888888888888888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=8e-09  Score=46.89  Aligned_cols=29  Identities=48%  Similarity=0.989  Sum_probs=26.4

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|.++.|++++.+.++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999999999999999999999998765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=2.4e-08  Score=48.14  Aligned_cols=28  Identities=32%  Similarity=0.757  Sum_probs=20.5

Q ss_pred             CCCeeccc--ccccccCchHHHhHHHHhcC
Q psy9360         160 SKPYSCHV--CGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       160 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  187 (236)
                      ++||.|..  ||+.|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  77777777777777777764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=1.4e-08  Score=47.79  Aligned_cols=27  Identities=44%  Similarity=1.022  Sum_probs=19.0

Q ss_pred             CCeeccc--ccccccCchHHHhHHHHhcC
Q psy9360         161 KPYSCHV--CGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       161 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  187 (236)
                      +||.|+.  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677766  77777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.8e-08  Score=46.16  Aligned_cols=26  Identities=31%  Similarity=0.804  Sum_probs=17.6

Q ss_pred             CCeeccc--ccccccCchHHHhHHHHhc
Q psy9360         161 KPYSCHV--CGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       161 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  186 (236)
                      +||.|+.  ||+.|...++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4666666  7777777777777777664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=2.5e-07  Score=41.25  Aligned_cols=27  Identities=48%  Similarity=0.938  Sum_probs=19.4

Q ss_pred             CCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       188 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |+||.|.+  ||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            46777766  7777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.7e-07  Score=40.36  Aligned_cols=24  Identities=38%  Similarity=0.677  Sum_probs=12.6

Q ss_pred             eeccccccccccCChhhHHHHHHhhc
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .+|.+  |++.|..+..|..|+|.|+
T Consensus         2 hkc~~--c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEV--CGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTT--TTBCCCCHHHHHHHGGGCC
T ss_pred             Cccch--hhhHhcchhHHHHHhhccC
Confidence            34544  5555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.7e-07  Score=42.77  Aligned_cols=31  Identities=42%  Similarity=0.778  Sum_probs=20.4

Q ss_pred             CCeecccccccccCchHHHhHHHHhcCCCCe
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHYGLKPY  191 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  191 (236)
                      +...|+.||+.|.....|.+|.-.|.+++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3456666666666666666666666666665

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=6.1e-07  Score=40.56  Aligned_cols=28  Identities=32%  Similarity=0.660  Sum_probs=19.0

Q ss_pred             CCCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         188 LKPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       188 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      ++||.|++  |+..|..+.-+.-|.+.|.|
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccC
Confidence            46677766  77777777777777776665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=5.7e-07  Score=40.08  Aligned_cols=27  Identities=37%  Similarity=1.031  Sum_probs=23.1

Q ss_pred             CCCeecccccccccCchHHHhHHHHhc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      ++||.|.+||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578899999999998888888888874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=4.5e-07  Score=39.02  Aligned_cols=26  Identities=38%  Similarity=0.902  Sum_probs=24.2

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      |++|++|++-|+.+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999975

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=7e-07  Score=39.24  Aligned_cols=25  Identities=28%  Similarity=0.744  Sum_probs=14.2

Q ss_pred             eecccccccccCchHHHhHHHHhcC
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      +.|.+||+.|...+.|++|+-+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4555555555555555555555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.6e-06  Score=39.13  Aligned_cols=29  Identities=45%  Similarity=0.840  Sum_probs=23.3

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      ++||.|++|+..|..+..+..|.++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47888888888888888888888888653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.1e-06  Score=37.89  Aligned_cols=26  Identities=31%  Similarity=0.672  Sum_probs=12.6

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +||+|.+  |...-.+++.|..|+|.|+
T Consensus         2 rpfkcql--csy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQI--CPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHTTCC
T ss_pred             Ccceeee--cccccCCchheEEeeeccc
Confidence            4445544  5444444455555554444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.97  E-value=3e-06  Score=37.50  Aligned_cols=28  Identities=46%  Similarity=0.926  Sum_probs=24.8

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .||+|+-+.|++.|...+-|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899988899999999999999999873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.9e-06  Score=37.40  Aligned_cols=29  Identities=28%  Similarity=0.642  Sum_probs=26.9

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      ++||+|..|...-.+.+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.3e-06  Score=39.02  Aligned_cols=28  Identities=43%  Similarity=0.953  Sum_probs=24.7

Q ss_pred             CCeeccccccccccCChhhHHHHH-Hhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHT-KIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~  216 (236)
                      +||.|.++.|.+.|...+.-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            589998889999999999999997 7885

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=8.1e-06  Score=36.20  Aligned_cols=26  Identities=27%  Similarity=0.576  Sum_probs=15.1

Q ss_pred             eecccccccccCchHHHhHHHHhcCC
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      |.|+.||......+.|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555566666655554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.72  E-value=9.4e-06  Score=34.43  Aligned_cols=24  Identities=42%  Similarity=1.034  Sum_probs=18.6

Q ss_pred             eeccccccccccCChhhHHHHHHhhc
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |+|.+  |.++|..++.|.+|+++|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            56755  8888888888888888774

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.7e-05  Score=38.31  Aligned_cols=30  Identities=30%  Similarity=0.721  Sum_probs=24.4

Q ss_pred             CCCCeeccccccccccCChhhHHHHHHhhc
Q psy9360         187 GLKPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       187 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .++||.|.++.|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            468888888888888888888888887764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=2e-05  Score=36.38  Aligned_cols=26  Identities=23%  Similarity=0.560  Sum_probs=14.3

Q ss_pred             CCCCcccCChHHHHHHHhhcCCCCCc
Q psy9360          80 EDCNSVFQTQAEWEEHARMHAVQRPF  105 (236)
Q Consensus        80 ~~C~~~f~~~~~l~~H~~~h~~~~~~  105 (236)
                      ..||+.|.....|.+|...|.+++||
T Consensus         9 e~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           9 EICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             TTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             HHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            55555555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1.7e-05  Score=34.99  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=24.5

Q ss_pred             CceeecCCCCCcccCChHHHHHHHhhc
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHARMH   99 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   99 (236)
                      .+|.|+...|++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            579999999999999999999998876

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.7e-05  Score=34.63  Aligned_cols=26  Identities=50%  Similarity=0.903  Sum_probs=18.1

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhc
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      +||+|..  |...-.++++|.+|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            5677754  7777777777777777764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=2.1e-05  Score=35.46  Aligned_cols=29  Identities=17%  Similarity=0.376  Sum_probs=24.0

Q ss_pred             CceeecCCCCCcccCChHHHHHHHhhcCC
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHARMHAV  101 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  101 (236)
                      +||.|.-..|++.+...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            47888777799999999999999987654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=2.7e-05  Score=33.57  Aligned_cols=25  Identities=32%  Similarity=0.563  Sum_probs=14.8

Q ss_pred             ecccccccccCchHHHhHHHHhcCC
Q psy9360         164 SCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       164 ~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      .|+.|.+.|.++.-|..|-+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4556666666666666666666554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=2.1e-05  Score=38.45  Aligned_cols=27  Identities=33%  Similarity=0.864  Sum_probs=23.3

Q ss_pred             cCCCCeeccccccccccCChhhHHHHHHh
Q psy9360         186 YGLKPYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       186 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      +|-+||+|.+  |++.|-.+.++.+|...
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhhh
Confidence            4679999977  99999999999999753

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.54  E-value=3e-05  Score=37.73  Aligned_cols=26  Identities=31%  Similarity=0.721  Sum_probs=13.7

Q ss_pred             CeecccccccccCchHHHhHHHHhcC
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHYG  187 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~~  187 (236)
                      .|+|..|++.|.+..+|-.|++.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            35555555555555555555555543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=4.4e-05  Score=33.28  Aligned_cols=26  Identities=42%  Similarity=0.853  Sum_probs=22.6

Q ss_pred             CCeecccccccccCchHHHhHHHHhc
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68899999988888889999998884

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=6e-05  Score=32.96  Aligned_cols=22  Identities=18%  Similarity=0.487  Sum_probs=14.6

Q ss_pred             CCCCcccCChHHHHHHHhhcCC
Q psy9360          80 EDCNSVFQTQAEWEEHARMHAV  101 (236)
Q Consensus        80 ~~C~~~f~~~~~l~~H~~~h~~  101 (236)
                      .+||+.|...+.|.+|...|++
T Consensus         6 ~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           6 AECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TTTCCEESSHHHHHHHGGGTSC
T ss_pred             HHHhHHHHHHHHHHHHhhcccC
Confidence            6666666666666666666655

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=7.9e-05  Score=33.11  Aligned_cols=27  Identities=37%  Similarity=0.645  Sum_probs=21.7

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||.|..  |...-.++++|+.|+++.++
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccc--cccccccchhhhhhhhcccc
Confidence            5788876  88888888888888887665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.30  E-value=6.4e-05  Score=31.80  Aligned_cols=24  Identities=38%  Similarity=0.894  Sum_probs=16.2

Q ss_pred             eecccccccccCchHHHhHHHHhc
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            466677777777777777776663

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.28  E-value=9.9e-05  Score=31.89  Aligned_cols=26  Identities=46%  Similarity=0.838  Sum_probs=23.4

Q ss_pred             eeccccccccccCChhhHHHHHHhhc
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |.|.++.|++.|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            78888899999999999999998885

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00015  Score=31.91  Aligned_cols=25  Identities=32%  Similarity=0.638  Sum_probs=12.3

Q ss_pred             CeeccccccccccCChhhHHHHHHhhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      .|.|.+  |...|..+-.|+.||-.|+
T Consensus         4 vftcs~--cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           4 VFTCSV--CQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred             eEEeHH--HHHHHHHHHhheeeeeccc
Confidence            344544  5555555555555554444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00013  Score=32.27  Aligned_cols=25  Identities=40%  Similarity=0.719  Sum_probs=23.2

Q ss_pred             eeccccccccccCChhhHHHHHHhhcC
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      |.|+.  |+......+-|++|+|+|++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcC
Confidence            78965  99999999999999999986

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=0.00018  Score=31.85  Aligned_cols=29  Identities=41%  Similarity=0.907  Sum_probs=24.3

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +||-|..+.|.+.|...-.|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            57888888899999998888888888865

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.17  E-value=0.00012  Score=33.19  Aligned_cols=25  Identities=40%  Similarity=0.922  Sum_probs=19.1

Q ss_pred             CeeccccccccccCChhhHHHHHH-hhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTK-IHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~-~h~  216 (236)
                      ||.|.+  |++.|..+.-|.+|++ .|.
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhc
Confidence            678866  8888888888888876 454

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.0003  Score=30.97  Aligned_cols=29  Identities=24%  Similarity=0.532  Sum_probs=26.6

Q ss_pred             CCCeecccccccccCchHHHhHHHHhcCC
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHYGL  188 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  188 (236)
                      +..|.|..|...|...-.|+.|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45799999999999999999999999985

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00012  Score=33.29  Aligned_cols=21  Identities=29%  Similarity=0.871  Sum_probs=9.7

Q ss_pred             Ceeccc--ccccccCchHHHhHH
Q psy9360         162 PYSCHV--CGRSFISNTHKNNHL  182 (236)
Q Consensus       162 ~~~C~~--C~~~f~~~~~l~~H~  182 (236)
                      ||.|+.  |.+.|++.+.-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444444  444444444444443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.0004  Score=30.64  Aligned_cols=21  Identities=29%  Similarity=0.740  Sum_probs=9.6

Q ss_pred             eecccccccccCchHHHhHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |.|..|..+|....+|..|++
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            444444444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00045  Score=33.22  Aligned_cols=26  Identities=27%  Similarity=0.844  Sum_probs=11.3

Q ss_pred             CCCcccccCcccccccchhhHHHhHh
Q psy9360         130 DRPYKCNYTSCGRHFRTHTQRQIHER  155 (236)
Q Consensus       130 ~~~~~C~~~~C~~~f~~~~~l~~H~~  155 (236)
                      ++||.|..+.|+..|.+...|..|..
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~   29 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhh
Confidence            34444443344444444444444443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00053  Score=33.39  Aligned_cols=25  Identities=28%  Similarity=0.793  Sum_probs=21.4

Q ss_pred             CCCCeecccccccccCchHHHhHHH
Q psy9360         159 DSKPYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       159 ~~~~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |-+||.|.+|++.|.-..+|.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            5688999999999998888888875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.79  E-value=0.00077  Score=32.64  Aligned_cols=28  Identities=18%  Similarity=0.413  Sum_probs=19.0

Q ss_pred             CceeecCCCCCcccCChHHHHHHHhhcCCC
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHARMHAVQ  102 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  102 (236)
                      +.|.|  ..|++.|.+...|--|++.|..+
T Consensus         4 r~~~C--~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTC--SFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEEC--TTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCC--CCCCCccCCcccccchHhhhcch
Confidence            45667  77777777777777777766543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00038  Score=32.75  Aligned_cols=29  Identities=28%  Similarity=0.483  Sum_probs=23.1

Q ss_pred             ceeecCCCCCc---ccCChHHHHHHHhhcCCC
Q psy9360          74 LHVCTYEDCNS---VFQTQAEWEEHARMHAVQ  102 (236)
Q Consensus        74 ~~~C~~~~C~~---~f~~~~~l~~H~~~h~~~  102 (236)
                      .|.|.|..|.+   .|.....|..|++.|+++
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            47788888874   488888899999988774

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.73  E-value=0.00082  Score=28.79  Aligned_cols=23  Identities=22%  Similarity=0.388  Sum_probs=15.4

Q ss_pred             CCCCcccCChHHHHHHHhhcCCC
Q psy9360          80 EDCNSVFQTQAEWEEHARMHAVQ  102 (236)
Q Consensus        80 ~~C~~~f~~~~~l~~H~~~h~~~  102 (236)
                      +.|.+.|.++.-|..|-+.|+|+
T Consensus         4 p~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           4 PTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             TTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cchHHHHHHhHhhhhccccccCC
Confidence            66666666666666666666655

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.70  E-value=0.0006  Score=30.09  Aligned_cols=28  Identities=21%  Similarity=0.374  Sum_probs=19.2

Q ss_pred             ceeecCCCCCcccCChHHHHHHHhhcCC
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHARMHAV  101 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  101 (236)
                      ||.|....|.+.|.+-..|.+|..+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            5666666677777777777777766655

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.59  E-value=0.001  Score=29.83  Aligned_cols=29  Identities=28%  Similarity=0.536  Sum_probs=23.3

Q ss_pred             CCeeccccccccccCChhhHHHHHHhhcC
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      +.|.|.+++|+..|.....|..|+-.|+|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            46888888888888888888888877765

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.54  E-value=0.00078  Score=28.37  Aligned_cols=22  Identities=27%  Similarity=0.853  Sum_probs=13.6

Q ss_pred             CeecccccccccCchHHHhHHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      ||+|..|...|.++..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5666666666666666666653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.53  E-value=0.00073  Score=30.35  Aligned_cols=28  Identities=25%  Similarity=0.590  Sum_probs=18.2

Q ss_pred             CcccccCcccccccchhhHHHhHhhcCC
Q psy9360         132 PYKCNYTSCGRHFRTHTQRQIHERCHLD  159 (236)
Q Consensus       132 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  159 (236)
                      .|.|.+++|+..|.....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4666666677666666666666666655

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00088  Score=31.47  Aligned_cols=27  Identities=26%  Similarity=0.671  Sum_probs=13.2

Q ss_pred             cccccCcccc---cccchhhHHHhHhhcCC
Q psy9360         133 YKCNYTSCGR---HFRTHTQRQIHERCHLD  159 (236)
Q Consensus       133 ~~C~~~~C~~---~f~~~~~l~~H~~~h~~  159 (236)
                      |.|.|..|..   .|.....|..|+++|+|
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCC
Confidence            4555545543   24444555555555544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0014  Score=28.49  Aligned_cols=22  Identities=36%  Similarity=0.536  Sum_probs=10.8

Q ss_pred             ecccccccccCchHHHhHHHHh
Q psy9360         164 SCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       164 ~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      +|+.|.++..++..|+.|.++|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4444555544544555554444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0025  Score=28.17  Aligned_cols=26  Identities=19%  Similarity=0.503  Sum_probs=19.9

Q ss_pred             CCeecccccccccCchHHHhHHHHhc
Q psy9360         161 KPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       161 ~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      +||.|..|.......++|.-|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            47888888888888888888887544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0012  Score=29.03  Aligned_cols=24  Identities=38%  Similarity=0.721  Sum_probs=21.5

Q ss_pred             CeeccccccccccCChhhHHHHHHhh
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIH  215 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h  215 (236)
                      ||.|..  |.-+|....+|.+||+..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            799965  999999999999999853

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.002  Score=28.09  Aligned_cols=24  Identities=38%  Similarity=0.797  Sum_probs=19.3

Q ss_pred             ccccccccccCChhhHHHHHHhhc
Q psy9360         193 CHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       193 C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |+-..|++.|.+.+++++|+-+|.
T Consensus         4 CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             CCcccHHHHhhchHHHHHHhhccC
Confidence            444578999999999999988875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.0012  Score=29.17  Aligned_cols=23  Identities=43%  Similarity=0.826  Sum_probs=12.3

Q ss_pred             CcccccCccccCCchhHHhhhhh
Q psy9360         104 PFGCRYCDKAFKTSGDLSKHSAI  126 (236)
Q Consensus       104 ~~~C~~C~~~f~~~~~l~~H~~~  126 (236)
                      ||+|+.|.....+.++|..|+..
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            45555555555555555555444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0022  Score=28.29  Aligned_cols=22  Identities=18%  Similarity=0.643  Sum_probs=9.9

Q ss_pred             CeecccccccccCchHHHhHHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      ||+|..|.....+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            3444444444444444444443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.17  E-value=0.0016  Score=29.46  Aligned_cols=23  Identities=30%  Similarity=0.719  Sum_probs=17.9

Q ss_pred             CeecccccccccCchHHHhHHHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                      ||.|.+|++.|.....|.+|+..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            57888888888888888888754

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0018  Score=32.64  Aligned_cols=25  Identities=24%  Similarity=0.518  Sum_probs=20.9

Q ss_pred             CeecccccccccCchHHHhHHHHhc
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      .|.|..||++|+....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4788889999998888888888874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.004  Score=27.01  Aligned_cols=25  Identities=28%  Similarity=0.607  Sum_probs=22.2

Q ss_pred             CeeccccccccccCChhhHHHHHHhhc
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHT  216 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  216 (236)
                      |-+|  ++|.++..+...|+.|.|+|-
T Consensus         2 pekc--~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKC--SECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEEC--SSSSCEESSHHHHHHHHGGGC
T ss_pred             CccC--cccccccCcHHHHHHhhcccc
Confidence            5688  569999999999999999984

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.41  E-value=0.0059  Score=25.59  Aligned_cols=22  Identities=32%  Similarity=0.840  Sum_probs=19.9

Q ss_pred             CeeccccccccccCChhhHHHHHH
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTK  213 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~  213 (236)
                      ||+|..  |...|-.+..|..|+.
T Consensus         2 pykcss--csqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHHH
Confidence            799965  9999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.21  E-value=0.0077  Score=25.90  Aligned_cols=21  Identities=24%  Similarity=0.782  Sum_probs=11.3

Q ss_pred             CeecccccccccCchHHHhHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHL  182 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~  182 (236)
                      ||+|..||+-+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            345555555555555555554

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0095  Score=25.88  Aligned_cols=24  Identities=21%  Similarity=0.642  Sum_probs=21.0

Q ss_pred             eecCCCCCcccCChHHHHHHHhhc
Q psy9360          76 VCTYEDCNSVFQTQAEWEEHARMH   99 (236)
Q Consensus        76 ~C~~~~C~~~f~~~~~l~~H~~~h   99 (236)
                      .|+...|.+.|...+.++.|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            577788999999999999998877

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.18  E-value=0.011  Score=24.87  Aligned_cols=22  Identities=32%  Similarity=0.762  Sum_probs=14.9

Q ss_pred             eeccccccccccCChhhHHHHHHh
Q psy9360         191 YVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       191 ~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      |-|++  |-+.|..+.++..|.++
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            56665  77777777777777664

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.00  E-value=0.013  Score=25.09  Aligned_cols=26  Identities=27%  Similarity=0.680  Sum_probs=21.8

Q ss_pred             eeecCCCCCcccCChHHHHHHHhhcC
Q psy9360          75 HVCTYEDCNSVFQTQAEWEEHARMHA  100 (236)
Q Consensus        75 ~~C~~~~C~~~f~~~~~l~~H~~~h~  100 (236)
                      |.|....|++.|.....|..|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67777899999999999999987663

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.012  Score=29.59  Aligned_cols=26  Identities=23%  Similarity=0.505  Sum_probs=21.3

Q ss_pred             CceeecCCCCCcccCChHHHHHHHhhcC
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHARMHA  100 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  100 (236)
                      ..|.|  ..|++.|.....|+.|...|.
T Consensus         5 ~l~pC--G~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPC--GLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCC--TTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeec--cccccccCCHHHHhHhHHhcC
Confidence            35667  899999999999999988774

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.025  Score=24.75  Aligned_cols=22  Identities=23%  Similarity=0.597  Sum_probs=10.8

Q ss_pred             cccccCccccCCchhHHhhhhh
Q psy9360         105 FGCRYCDKAFKTSGDLSKHSAI  126 (236)
Q Consensus       105 ~~C~~C~~~f~~~~~l~~H~~~  126 (236)
                      |.|..|++...+...++.|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            4455555555555555555443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.022  Score=24.87  Aligned_cols=23  Identities=35%  Similarity=0.690  Sum_probs=19.5

Q ss_pred             eccccccccccCChhhHHHHHHh
Q psy9360         192 VCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       192 ~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      .|.++.|++-|.++..|..|.+-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            46678899999999999988873

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.66  E-value=0.026  Score=23.63  Aligned_cols=22  Identities=27%  Similarity=0.748  Sum_probs=19.2

Q ss_pred             eecccccccccCchHHHhHHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999988875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.035  Score=23.88  Aligned_cols=22  Identities=23%  Similarity=0.532  Sum_probs=14.3

Q ss_pred             eecccccccccCchHHHhHHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRI  184 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~  184 (236)
                      |.|+.|+-....++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5666666666666666666653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.17  E-value=0.043  Score=23.50  Aligned_cols=22  Identities=18%  Similarity=0.447  Sum_probs=15.4

Q ss_pred             ceeecCCCCCcccCChHHHHHHHh
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHAR   97 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~   97 (236)
                      ||.|  ..||+.|..+.+|..|..
T Consensus         1 pf~c--~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFEC--PKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBC--TTTCCBCSSHHHHHHHHH
T ss_pred             CCcc--ccchhhhhhHhHHHHHHH
Confidence            4566  777777777777777754

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.13  E-value=0.062  Score=23.46  Aligned_cols=23  Identities=26%  Similarity=0.661  Sum_probs=12.4

Q ss_pred             eecccccccccCchHHHhHHHHh
Q psy9360         163 YSCHVCGRSFISNTHKNNHLRIH  185 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~~h  185 (236)
                      |.|..||+...+...++.|.-.-
T Consensus         3 ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEeec
Confidence            45555555555555555555433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.045  Score=25.11  Aligned_cols=21  Identities=24%  Similarity=0.727  Sum_probs=10.1

Q ss_pred             eecccccccccCchHHHhHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |.|..||+.|.....+.+|..
T Consensus         5 fvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhh
Confidence            445555555554444444443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.68  E-value=0.076  Score=22.79  Aligned_cols=23  Identities=22%  Similarity=0.528  Sum_probs=17.6

Q ss_pred             ceeecCCCCCcccCChHHHHHHHhh
Q psy9360          74 LHVCTYEDCNSVFQTQAEWEEHARM   98 (236)
Q Consensus        74 ~~~C~~~~C~~~f~~~~~l~~H~~~   98 (236)
                      .|+|  +.|+.....++.|+.|++.
T Consensus         2 k~qc--phc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHC--PHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEEC--SSSSCEESSHHHHHHHHHH
T ss_pred             CccC--CcchhheeehhhhhHHhhh
Confidence            4677  7788888888888888764

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.52  E-value=0.05  Score=25.05  Aligned_cols=27  Identities=22%  Similarity=0.495  Sum_probs=18.4

Q ss_pred             CCCeecccccccccCchHHHhHHHHhc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      +..|+|.+|.+.+...+++-+|.-+.+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            345777777777777777777765443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.48  E-value=0.08  Score=26.40  Aligned_cols=23  Identities=22%  Similarity=0.599  Sum_probs=10.5

Q ss_pred             CCeeccccccccccCChhhHHHHHH
Q psy9360         189 KPYVCHVEGCKRKFVDLSSLKKHTK  213 (236)
Q Consensus       189 ~~~~C~~~~C~~~f~~~~~l~~H~~  213 (236)
                      .|..|++  |+....++.+|++|+.
T Consensus        23 qpatcpi--c~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCPI--CYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECTT--TCCEESSHHHHHHHHH
T ss_pred             CCCCCch--HHHHHHHHHHHHHHHH
Confidence            3444443  4444444444444444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.16  E-value=0.033  Score=25.34  Aligned_cols=22  Identities=27%  Similarity=0.567  Sum_probs=16.7

Q ss_pred             CeecccccccccCchHHHhHHH
Q psy9360         162 PYSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       162 ~~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      .|.|.-||..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888877777764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.65  E-value=0.11  Score=25.82  Aligned_cols=32  Identities=22%  Similarity=0.456  Sum_probs=26.3

Q ss_pred             CCCCeecccccccccCchHHHhHHHHhcCCCC
Q psy9360         159 DSKPYSCHVCGRSFISNTHKNNHLRIHYGLKP  190 (236)
Q Consensus       159 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  190 (236)
                      .+.|-.|++|+.+..+..+|++|...-+-.+|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            45688999999999999999999986554443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.14  E-value=0.033  Score=30.91  Aligned_cols=21  Identities=38%  Similarity=0.795  Sum_probs=18.0

Q ss_pred             eecccccccccCchHHHhHHH
Q psy9360         163 YSCHVCGRSFISNTHKNNHLR  183 (236)
Q Consensus       163 ~~C~~C~~~f~~~~~l~~H~~  183 (236)
                      |.|..|++.|.+...|..|.+
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            788889999988888888875

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.19  Score=22.72  Aligned_cols=23  Identities=22%  Similarity=0.605  Sum_probs=20.5

Q ss_pred             eecCCCCCcccCChHHHHHHHhh
Q psy9360          76 VCTYEDCNSVFQTQAEWEEHARM   98 (236)
Q Consensus        76 ~C~~~~C~~~f~~~~~l~~H~~~   98 (236)
                      .|.|..|+..|.+...|..|+..
T Consensus         3 nChW~~C~~eFdtQd~LV~Hinn   25 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINS   25 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred             cccccccccccCCHHHHHHHccc
Confidence            47889999999999999999864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.44  E-value=0.32  Score=22.28  Aligned_cols=27  Identities=19%  Similarity=0.370  Sum_probs=19.0

Q ss_pred             cCCceeecCCCCCcccCChHHHHHHHhhc
Q psy9360          71 KEKLHVCTYEDCNSVFQTQAEWEEHARMH   99 (236)
Q Consensus        71 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   99 (236)
                      ++..|.|  ..|.+.+...+++-+|-.+-
T Consensus         5 g~~~yRC--~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           5 GEHTYRC--KVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             ETTEEEC--TTTCCEESSHHHHHHHHHHH
T ss_pred             cCcEEEe--ehhhHHHHHHHHHHHHHHhh
Confidence            3446777  77888888888887776543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.38  E-value=0.22  Score=22.74  Aligned_cols=26  Identities=19%  Similarity=0.600  Sum_probs=21.4

Q ss_pred             CeeccccccccccCChhhHHHHHHhhcC
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKIHTQ  217 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  217 (236)
                      .|.|.  .|++.|..+..+.+|...-.|
T Consensus         4 afvcs--kcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCS--KCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECS--SSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeec--ccccchhcchHHHHHhhhcCC
Confidence            48895  499999999999999875443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.32  E-value=0.21  Score=22.56  Aligned_cols=22  Identities=23%  Similarity=0.536  Sum_probs=14.6

Q ss_pred             CceeecCCCCCcccCChHHHHHHH
Q psy9360          73 KLHVCTYEDCNSVFQTQAEWEEHA   96 (236)
Q Consensus        73 ~~~~C~~~~C~~~f~~~~~l~~H~   96 (236)
                      ..|.|  ..||-.|.+.+.|..|+
T Consensus         7 arf~c--~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMC--LPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBC--TTTCCBCSCHHHHHHHT
T ss_pred             cceec--cccceeecChhHHHhhh
Confidence            34666  66777777777776664

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.04  E-value=0.13  Score=27.97  Aligned_cols=13  Identities=31%  Similarity=1.012  Sum_probs=6.6

Q ss_pred             CeecccccccccC
Q psy9360         162 PYSCHVCGRSFIS  174 (236)
Q Consensus       162 ~~~C~~C~~~f~~  174 (236)
                      .|.|+.|++.|+.
T Consensus        14 ~y~Cp~C~~~ys~   26 (62)
T d1vd4a_          14 SFKCPVCSSTFTD   26 (62)
T ss_dssp             EEECSSSCCEEEH
T ss_pred             ceECCCCCCCcch
Confidence            4555555555543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.94  E-value=0.18  Score=24.19  Aligned_cols=12  Identities=42%  Similarity=1.010  Sum_probs=7.4

Q ss_pred             CCeecccccccc
Q psy9360         161 KPYSCHVCGRSF  172 (236)
Q Consensus       161 ~~~~C~~C~~~f  172 (236)
                      +.|.|.+||..+
T Consensus         4 ~~~~C~vCG~i~   15 (37)
T d1nnqa2           4 KVYICPICGYTA   15 (37)
T ss_dssp             CEEECTTTCCEE
T ss_pred             cEEECCCCCCEe
Confidence            346677777654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.02  E-value=0.24  Score=27.28  Aligned_cols=25  Identities=28%  Similarity=0.515  Sum_probs=20.7

Q ss_pred             CCceeecCCCCCcccCChHHHHHHHhh
Q psy9360          72 EKLHVCTYEDCNSVFQTQAEWEEHARM   98 (236)
Q Consensus        72 ~~~~~C~~~~C~~~f~~~~~l~~H~~~   98 (236)
                      ...|.|  ..|++.|.+...|..|.++
T Consensus        13 ~gqfYC--v~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRC--LACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEE--TTTTEECSSHHHHHHHTTC
T ss_pred             CCEEec--ccccCccCCHHHHHHHHcc
Confidence            345889  8999999999999999753

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.21  E-value=0.91  Score=19.58  Aligned_cols=25  Identities=28%  Similarity=0.736  Sum_probs=18.9

Q ss_pred             CeeccccccccccCChhhHHHHHHh
Q psy9360         190 PYVCHVEGCKRKFVDLSSLKKHTKI  214 (236)
Q Consensus       190 ~~~C~~~~C~~~f~~~~~l~~H~~~  214 (236)
                      .|+|....|...|..+..+++|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            4677667788888888888888753

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.24  E-value=0.79  Score=24.50  Aligned_cols=27  Identities=30%  Similarity=0.651  Sum_probs=21.1

Q ss_pred             CCCeecccccccccCchHHHhHHHHhc
Q psy9360         160 SKPYSCHVCGRSFISNTHKNNHLRIHY  186 (236)
Q Consensus       160 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  186 (236)
                      ...|.|..|...|.+...|..|+..|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            345888888888888888888888774