Psyllid ID: psy9424

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-----
Protein Sequence
MCREQVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNESTGGS
Secondary Structure (PSIPRED)
cccccccccccccEEEcccccccccccccccccccccccccccccEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccEEEcccccEEEEcccccEEcccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccEEEccccccEEEEcccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEcccccccccccccccccccccccccccccEccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccEEccccccEEEEcccccccccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccccccEEccccccEEEEcccccccccccccc
Coil and Loop (DISEMBL)
MCREQVQWQQISQHLqqvpglasaacvdgrcrnpceadevcgrnaecavvnhtprctcvagtvgdpkyqsgvgtsctssrdcigeqqcisglcqptcrsnttcpaqhycnsglcvlemqctthdqcsateqcrsndmgqmqcrpacegilcgrnalctasdhhatcsckpgyvghpgpsmgtgpsshsghaggkhgpglspgatshsshsggpvgchrvecnshadcsgdkvcedhrckisclannpcgpnalcsaekhkqicycqpgytgdayfgchlidfcaakpcgpgarcdnsrgsykclcplglvgdpygagcvsasqctrddqcppgahcvktdgvpkckascqsdeecglgekclqgqcnnpcerqgacgvnslcnvlthrkvcfcprgftgdpetecvritclshadcypgggslclanlctrgcsadtdcpaalscrsaecvdpcspapcgpnaqcsvanhrplcscpaglmglpsantacvrtpaleceenrqckgegevcadgrcrplcssdggclsnestggs
Flexible Loop (DISEMBL)
MCREQVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALEceenrqckgegevcadgrcrplcssdggclsnestggs
Low Complexity Region (SEG)
MCREQVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMgtgpsshsghaggkhgpgLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNESTGGS
Disordered region (IsUnstruct)
*********QISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYV*****************************************GCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLC***************
Disordered Region (DISOPRED)
MCRE***WQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE*****
Disordered Region (DISEMBL)
**********************SAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY**********SRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPS**********************************VGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDG**************GLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNESTGGS
Disordered Region (DISPRO)
MCREQVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSN******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCREQVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNESTGGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	535	2.2.26 [Sep-21-2011]
Q8UWJ4	717	Delta-like protein D OS=D	no	N/A	0.390	0.291	0.271	8e-07
Q9NR61	685	Delta-like protein 4 OS=H	yes	N/A	0.403	0.315	0.285	4e-06
Q9JI71	686	Delta-like protein 4 OS=M	no	N/A	0.405	0.316	0.302	4e-06
Q9QW30	2471	Neurogenic locus notch ho	no	N/A	0.407	0.088	0.272	7e-06
P35555	2871	Fibrillin-1 OS=Homo sapie	no	N/A	0.220	0.041	0.298	2e-05
O35806	1764	Latent-transforming growt	no	N/A	0.289	0.087	0.294	2e-05
O35516	2470	Neurogenic locus notch ho	no	N/A	0.413	0.089	0.278	2e-05
Q61549	931	EGF-like module-containin	no	N/A	0.452	0.259	0.276	3e-05
Q07008	2531	Neurogenic locus notch ho	no	N/A	0.394	0.083	0.28	4e-05
Q61555	2907	Fibrillin-2 OS=Mus muscul	no	N/A	0.218	0.040	0.302	4e-05

>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2

 Score = 55.8 bits (133), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 99/254 (38%), Gaps = 45/254 (17%)

Query: 242 CLANNPCGPNALCSAE-KHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRG 299
           C  + PC   A C+   +    C C+PG+TGD+   C + ++ C+  PC  G  C +   
Sbjct: 290 CTHHKPCQNGATCTNTGQGSYTCSCRPGFTGDS---CEIEVNECSGSPCRNGGSCTDLEN 346

Query: 300 SYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGE 359
           +Y C CP G     YG  C  ++    D  C  G HC      P+    CQ         
Sbjct: 347 TYSCTCPPGF----YGRNCELSAMTCADGPCFNGGHCADN---PEGGYFCQ--------- 390

Query: 360 KCLQGQCNNPCERQ------GACGVNSLCNVLTHRKVCFCPRGFTG----DPETECVRIT 409
            C  G     CE++        C  ++ C  L    +C CP GFTG    D   EC    
Sbjct: 391 -CPMGYAGFNCEKKIDHCSSNPCSNDAQCLDLVDSYLCQCPEGFTGTHCEDNIDECATYP 449

Query: 410 CLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRS-AECVDPCSPAPCGPNAQCSVA 468
           C +        G  C   L    C+    CP   + ++    V+ C   PC   A C   
Sbjct: 450 CQN--------GGTCQDGLSDYTCT----CPPGYTGKNCTSAVNKCLHNPCHNGATCHEM 497

Query: 469 NHRPLCSCPAGLMG 482
           ++R +C+C  G  G
Sbjct: 498 DNRYVCACIPGYGG 511

Acts as a ligand for Notch receptors and is involved in primary neurogenesis and somitogenesis. Can activate Notch receptors, thereby playing a key role in lateral inhibition, a process that prevents the immediate neighbors of each nascent neural cell from simultaneously embarking on neural differentiation. Required in somite segmentation to keep the oscillations of neighboring presomitic mesoderm cells synchronized.
Danio rerio (taxid: 7955)

>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 101/252 (40%), Gaps = 36/252 (14%)

Query: 242 CLANNPCGPNALCSAEKHKQI-CYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRG 299
           C  ++PC   A CS    +   C C+PGYTG     C L +  C + PC  G  C +   
Sbjct: 288 CTHHSPCKNGATCSNSGQRSYTCTCRPGYTG---VDCELELSECDSNPCRNGGSCKDQED 344

Query: 300 SYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGE 359
            Y CLCP G     YG  C  ++    D  C  G  C + +        C  +      E
Sbjct: 345 GYHCLCPPGY----YGLHCEHSTLSCADSPCFNGGSCRERNQGANYACECPPNFTGSNCE 400

Query: 360 KCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDP----ETECVRITCLSHAD 415
           K +    +NPC   G C +N         ++C C  GFTG       ++C R  C     
Sbjct: 401 KKVDRCTSNPCANGGQC-LNR-----GPSRMCRCRPGFTGTYCELHVSDCARNPCAHGGT 454

Query: 416 CYPGGGSLCLANLCTRGCSADTDCPAALSCRSAEC---VDPCSPAPCGPNAQC--SVANH 470
           C+     L    +CT        CPA  S R  E    +D C+ +PC   A C   ++  
Sbjct: 455 CHDLENGL----MCT--------CPAGFSGRRCEVRTSIDACASSPCFNRATCYTDLSTD 502

Query: 471 RPLCSCPAGLMG 482
             +C+CP G +G
Sbjct: 503 TFVCNCPYGFVG 514

Plays a role in the Notch signaling pathway. Activates Notch-1 and Notch-4.

Homo sapiens (taxid: 9606)

>sp|Q9JI71|DLL4_MOUSE Delta-like protein 4 OS=Mus musculus GN=Dll4 PE=2 SV=2

 Score = 53.5 bits (127), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 103/251 (41%), Gaps = 34/251 (13%)

Query: 242 CLANNPCGPNALCSAEKHK-QICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRG 299
           C  ++PC   + CS    K   C C PGYTG+    C L +  CA+ PC  G  C +   
Sbjct: 289 CTHHSPCKNGSTCSNSGPKGYTCTCLPGYTGEH---CELGLSKCASNPCRNGGSCKDQEN 345

Query: 300 SYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGE 359
           SY CLCP G     YG  C  ++    D  C  G  C + +        C  +      E
Sbjct: 346 SYHCLCPPGY----YGQHCEHSTLTCADSPCFNGGSCRERNQGSSYACECPPNFTGSNCE 401

Query: 360 KCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETEC-VRITCLSHADCYP 418
           K +    +NPC   G C            + C C  GFTG   T C + I+  + + C  
Sbjct: 402 KKVDRCTSNPCANGGQCQNRG------PSRTCRCRPGFTG---THCELHISDCARSPCAH 452

Query: 419 GGGSLCLAN--LCTRGCSADTDCPAALSCRSAECV---DPCSPAPCGPNAQCS--VANHR 471
           GG    L N  +CT        CPA  S R  E     D C+  PC   A C   ++ + 
Sbjct: 453 GGTCHDLENGPVCT--------CPAGFSGRRCEVRITHDACASGPCFNGATCYTGLSPNN 504

Query: 472 PLCSCPAGLMG 482
            +C+CP G +G
Sbjct: 505 FVCNCPYGFVG 515

Plays a role in the Notch signaling pathway. Activates Notch-1 and Notch-4.

Mus musculus (taxid: 10090)

>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus GN=Notch2 PE=1 SV=1

 Score = 52.8 bits (125), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 99/275 (36%), Gaps = 57/275 (20%)

Query: 246  NPCGPNALCSAEKHKQ--ICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYK 302
            NPC   A+C    + +   C C PG+ G     C + +D C +KPC     C N++GSY 
Sbjct: 840  NPCENAAVCKEAPNFESFTCLCAPGWQGQR---CTVDVDECVSKPCMNNGICHNTQGSYM 896

Query: 303  CLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCK-------ASCQSDEEC 355
            C CP G      G  C         + C  G  CV       C          CQ+D   
Sbjct: 897  CECPPGFS----GMDCEEDINDCLANPCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDMNE 952

Query: 356  GLGEKCLQG---------------------QCNNPCER--QGACGVNSLCNVLTHRKVCF 392
             L E C  G                      C N  +   + +C     C    +   C 
Sbjct: 953  CLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSFSCL 1012

Query: 393  CPRGFTG----DPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSA 448
            CP GFTG        EC    CL+   C  G G+      CT        CP   + ++ 
Sbjct: 1013 CPVGFTGPFCLHDINECSSNPCLNSGTCVDGLGTY----RCT--------CPLGYTGKNC 1060

Query: 449  E-CVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMG 482
            +  V+ CSP+PC     C+    RP C CP G  G
Sbjct: 1061 QTLVNLCSPSPCKNKGTCAQEKARPRCLCPPGWDG 1095

Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation.

Rattus norvegicus (taxid: 10116)

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 16/134 (11%)

Query: 248  CGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCA--AKPCGPGARCDNSRGSYKCLC 305
            CG +A+C+       C C PG+ GD    C  +D C+     C   A C N+ GSY+CLC
Sbjct: 1333 CGKHAVCTNTAGSFKCSCSPGWIGDG-IKCTDLDECSNGTHMCSQHADCKNTMGSYRCLC 1391

Query: 306  PLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCK-----------ASCQSDEE 354
              G  GD  G  C    +C+ +        C+   G  +C+            +C+  +E
Sbjct: 1392 KEGYTGD--GFTCTDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPSADGKACEDIDE 1449

Query: 355  CGLGEKCLQGQCNN 368
            C L   C+ G C+N
Sbjct: 1450 CSLPNICVFGTCHN 1463

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|O35806|LTBP2_RAT Latent-transforming growth factor beta-binding protein 2 OS=Rattus norvegicus GN=Ltbp2 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 64/163 (39%), Gaps = 8/163 (4%)

Query: 232  VCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGY-TGDAYFGCHLIDFCAAKPCGP 290
            VCED      C+    C P+  C        C C PG+ + +    C  +D CA      
Sbjct: 1163 VCED---VDECVGEEHCAPHGECLNSPGSFFCLCAPGFASAEGGTRCQDVDECATTEPCL 1219

Query: 291  GARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQ 350
            G  C N+ GS+ CLC  G    P    CV   +C  D  C     C  TDG  +C    Q
Sbjct: 1220 GGHCVNTEGSFNCLCETGFQPAPDSGECVDIDECANDTVCGNHGFCDNTDGSFRCLCD-Q 1278

Query: 351  SDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFC 393
              E    G +C+     N CE   A   ++LC  +    +C C
Sbjct: 1279 GFETSPSGWECVD---VNECELMLAVCGDALCENVEGSFLCLC 1318

May play an integral structural role in elastic-fiber architectural organization and/or assembly. May be involved in the assembly, secretion and targeting of TGF- beta to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGF-beta. May have a structural role in the extra cellular matrix (ECM).

Rattus norvegicus (taxid: 10116)

>sp|O35516|NOTC2_MOUSE Neurogenic locus notch homolog protein 2 OS=Mus musculus GN=Notch2 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 108/276 (39%), Gaps = 55/276 (19%)

Query: 244 ANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYK 302
           A+NPC  + +C    ++  C C PG+TG     C++ ID CA+ PC  GA C N    ++
Sbjct: 648 ASNPCM-HGVCVDGINRYSCVCSPGFTGQR---CNIDIDECASNPCRKGATCINDVNGFR 703

Query: 303 CLCPLGLVGDPYGAGCVS-ASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKC 361
           C+CP G    P+   C S  ++C  +    P  H   T G+   K  C +    G+  + 
Sbjct: 704 CICPEG----PHHPSCYSQVNECLSN----PCIHGNCTGGLSGYKCLCDAG-WVGVNCEV 754

Query: 362 LQGQC-NNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGD----PETECVRITCLSHADC 416
            + +C +NPC+  G       CN L +   C C +GF G        EC    CL+   C
Sbjct: 755 DKNECLSNPCQNGGT------CNNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTC 808

Query: 417 Y------------PGGGSLC---LANLCTRGCSADTDCPAALSCRSAEC----------- 450
           +            P  G  C   LA      C     C  A +  S  C           
Sbjct: 809 FDDVSGYTCHCMLPYTGKNCQTVLAPCSPNPCENAAVCKEAPNFESFSCLCAPGWQGKRC 868

Query: 451 ---VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGL 483
              VD C   PC  N  C       +C CP G  G+
Sbjct: 869 TVDVDECISKPCMNNGVCHNTQGSYVCECPPGFSGM 904

Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation. In collaboration with RELA/p65 enhances NFATc1 promoter activity and positively regulates RANKL-induced osteoclast differentiation.

Mus musculus (taxid: 10090)

>sp|Q61549|EMR1_MOUSE EGF-like module-containing mucin-like hormone receptor-like 1 OS=Mus musculus GN=Emr1 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 104/275 (37%), Gaps = 33/275 (12%)

Query: 151 CGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHS 210
           CG N++CT     A CSC  G+    G     G  S            L+ G     S+ 
Sbjct: 92  CGPNSVCTNILGRAKCSCLRGFSSSTGKDWILG--SLDNFLCADVDECLTIGICPKYSNC 149

Query: 211 GGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYT 270
              VG +   C      +G  +CED      C+  + C  +A C        C C  G  
Sbjct: 150 SNSVGSYSCTCQPGFVLNG-SICEDED---ECVTRDVCPEHATCHNTLGSYYCTCNSGLE 205

Query: 271 ----GDAYFG----CHLIDFCA--AKPCGPGARCDNSRGSYKCLCPLG-------LVGDP 313
               G  + G    C  +D C+  +  CGP   C N+ GSY C CP G       ++G P
Sbjct: 206 SSGGGPMFQGLDESCEDVDECSRNSTLCGPTFICINTLGSYSCSCPAGFSLPTFQILGHP 265

Query: 314 YGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQ---SDEECGLGEKCLQGQCNNPC 370
               C    +C  DD CP  + C  T G   C  +C    +     L  K L+  C +  
Sbjct: 266 ADGNCTDIDEC--DDTCPLNSSCTNTIGSYFC--TCHPGFASSNGQLNFKDLEVTCEDID 321

Query: 371 E---RQGACGVNSLCNVLTHRKVCFCPRGFTGDPE 402
           E       CG+NS+C  +    +C C   F  DPE
Sbjct: 322 ECTQDPLQCGLNSVCTNVPGSYICGCLPDFQMDPE 356

Could be involved in cell-cell interactions.

Mus musculus (taxid: 10090)

>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus GN=Notch1 PE=2 SV=2

 Score = 50.4 bits (119), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 91/250 (36%), Gaps = 39/250 (15%)

Query: 244  ANNPCGPNALC--SAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGS 300
            A +PC  + +C  S +     C C  G+ G     C + I+ C   PC  GA C N+ GS
Sbjct: 834  ATSPCKNSGVCKESEDYESFSCVCPTGWQGQT---CEIDINECVKSPCRHGASCQNTNGS 890

Query: 301  YKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEK 360
            Y+CLC  G      G  C S     R + C  G  C  TDGV      C    +    E+
Sbjct: 891  YRCLCQAGYT----GRNCESDIDDCRPNPCHNGGSC--TDGVNAAFCDCLPGFQGAFCEE 944

Query: 361  CLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTG----DPETECVRITCLSHADC 416
             +     NPC+     G N  C        C CP GF G    +   +C   +C +   C
Sbjct: 945  DINECATNPCQN----GAN--CTDCVDSYTCTCPTGFNGIHCENNTPDCTESSCFNGGTC 998

Query: 417  YPGGGS---LCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPL 473
              G  S   LC        C  D              V+ C   PC     C  +     
Sbjct: 999  VDGINSFTCLCPPGFTGSYCQYD--------------VNECDSRPCLHGGTCQDSYGTYK 1044

Query: 474  CSCPAGLMGL 483
            C+CP G  GL
Sbjct: 1045 CTCPQGYTGL 1054

Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May be important for follicular differentiation and possibly cell fate selection within the follicle. During cerebellar development, may function as a receptor for neuronal DNER and may be involved in the differentiation of Bergmann glia. Represses neuronal and myogenic differentiation. May enhance HIF1A function by sequestering HIF1AN away from HIF1A (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.

Rattus norvegicus (taxid: 10116)

>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2

 Score = 50.4 bits (119), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 49/129 (37%), Gaps = 12/129 (9%)

Query: 251 NALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLV 310
           N  C        C C  GY  DA   C  +D C + PC  G  C N+ GSY C C  G  
Sbjct: 500 NGRCIPTVSSYRCECNMGYKQDANGDCIDVDECTSNPCSNG-DCVNTPGSYYCKCHAGFQ 558

Query: 311 GDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCK-----------ASCQSDEECGLGE 359
             P    C+   +C ++        CV TDG  +C             +C   +EC    
Sbjct: 559 RTPTKQACIDIDECIQNGVLCKNGRCVNTDGSFQCICNAGFELTTDGKNCVDHDECTTTN 618

Query: 360 KCLQGQCNN 368
            CL G C N
Sbjct: 619 MCLNGMCIN 627

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	535
328714521	16577	PREDICTED: hypothetical protein LOC10016	0.876	0.028	0.410	1e-122
270013391	21117	hypothetical protein TcasGA2_TC011986 [T	0.882	0.022	0.406	1e-112
332028268	11402	Neurogenic locus Notch protein [Acromyrm	0.895	0.042	0.379	1e-103
307204120	12783	Neurogenic locus notch-like protein prot	0.882	0.036	0.374	1e-100
195117710	7357	GI17886 [Drosophila mojavensis] gi|19391	0.882	0.064	0.374	6e-99
195386886	3915	GJ17387 [Drosophila virilis] gi|19414859	0.882	0.120	0.375	9e-99
195052558	7303	GH13743 [Drosophila grimshawi] gi|193900	0.882	0.064	0.375	1e-98
198475573	17011	GA26108 [Drosophila pseudoobscura pseudo	0.876	0.027	0.379	1e-98
442625922	14825	dumpy, isoform X [Drosophila melanogaste	0.876	0.031	0.372	8e-98
386769086	15638	dumpy, isoform I [Drosophila melanogaste	0.876	0.029	0.372	8e-98

>gi|328714521|ref|XP_003245382.1| PREDICTED: hypothetical protein LOC100166039 [Acyrthosiphon pisum]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/634 (41%), Positives = 332/634 (52%), Gaps = 165/634 (26%)

Query: 25   ACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDP------------------ 66
            ACV+ +C NPC   +VCG N +C++ N    C C AG  GDP                  
Sbjct: 2459 ACVNSKCVNPCSVPKVCGDNTDCSIQNDAAMCNCKAGYTGDPHLGCTSILYCASNSQCPT 2518

Query: 67   --KYQSGVGT-SCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTH 123
              K  +G+ T  C  +RDC+G + CI  +CQPTC  NT+CP   YC + +CV E++C T+
Sbjct: 2519 TTKCNNGICTVECNLARDCVGNELCIGNICQPTCHGNTSCPEFQYCQNNICVQELRCFTN 2578

Query: 124  DQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTG 183
            + C  T+ C++N +GQ QC   CE ++CGR+A C+A DH   C+C+PGY G+P       
Sbjct: 2579 NNCEDTQICKTNTIGQTQCIDVCEEVICGRHAECSAVDHQPVCNCEPGYHGNPH------ 2632

Query: 184  PSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCL 243
                                          +GCH++EC  + DC+ DK+CEDH CKISCL
Sbjct: 2633 ------------------------------IGCHKIECYENEDCTNDKICEDHMCKISCL 2662

Query: 244  ANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKC 303
            ANNPCGPNALCSAE H+Q+CYCQPGYTGD YFGC ++D C A PCGPGARCDNSRGS+KC
Sbjct: 2663 ANNPCGPNALCSAENHQQVCYCQPGYTGDPYFGCDVLDLCEADPCGPGARCDNSRGSFKC 2722

Query: 304  LCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQ------------- 350
            LCPLG VGDPY  GC S  +C  D+ CPP AHCV+T+G+PKC+ +C+             
Sbjct: 2723 LCPLGTVGDPYKNGCHSPVECQIDEDCPPAAHCVQTNGIPKCQDNCEKVKCGPNAECGTS 2782

Query: 351  -------------------------------SDEECGLGEKCLQGQC------------- 366
                                           S+++C     C  G C             
Sbjct: 2783 AHYGSCICHPGYQGDPNDLNVGCRPRAVACTSNQQCPSNTYCYNGACKSSCQSDAECGLS 2842

Query: 367  --------NNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRI--TCLSHADC 416
                    NNPCERQG+CG+NS CNV+ H K C CP GFTG  E ECVRI   C  + +C
Sbjct: 2843 EQCLQGQCNNPCERQGSCGLNSNCNVINHVKHCSCPAGFTGGSEIECVRIPVACEINENC 2902

Query: 417  YPGG----------------------------------------GSLCLANLCTRGCSAD 436
            YP                                          G +CL N+C  GC ++
Sbjct: 2903 YPNSTCHQSVCQPDCQADNHCALNEKCFKNHCALTCRVDNDCFLGHICLNNMCLFGCKSN 2962

Query: 437  TDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPAL 496
             DC +  SCR   C +PC   PCGPNA C+VAN R +CSC  G +  P+A  AC+RTPA 
Sbjct: 2963 EDCASVESCRDNVCTNPCVAMPCGPNAICTVANQRAMCSCRIGFVPNPTAKVACIRTPAE 3022

Query: 497  ECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
             C EN++C   G  C D  C+P+CSSD  C  NE
Sbjct: 3023 PCNENQECPA-GYSCNDNSCQPVCSSDASCHGNE 3055

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum]

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 258/634 (40%), Positives = 319/634 (50%), Gaps = 162/634 (25%)

Query: 25   ACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY---------------- 68
            AC+D RC NPC     CG+ AEC   NH   C+C AGT GDP                  
Sbjct: 2507 ACIDSRCINPCSLVNACGQKAECRPSNHVGVCSCQAGTTGDPHLGCVPVQYCAVDTQCPA 2566

Query: 69   ----QSGVGTS-CTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTH 123
                 +G+ TS CTSSR+CI +Q CI G+CQPTC+SN++CP   +C + +C  E +C  +
Sbjct: 2567 GSQCYNGICTSICTSSRECISDQLCIQGICQPTCKSNSSCPDFQFCQNNICTQEFKCRAN 2626

Query: 124  DQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTG 183
            D CS TE+C +N +GQ +C   CEG+LCGRNA C + +H ATC CK GY G+P       
Sbjct: 2627 DDCSFTEKCLANTVGQNECIDVCEGVLCGRNAECVSQNHEATCICKIGYKGNP------- 2679

Query: 184  PSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCL 243
                                      +   +GC RVEC S+  CS DK+C+ + CKI+CL
Sbjct: 2680 --------------------------NDDKLGCQRVECESNDQCSNDKLCDQYMCKIACL 2713

Query: 244  ANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKC 303
             NNPCG NALCSAE H+Q+CYCQPGYTGD + GC LIDFCA  PCGP ARC NSRGS+KC
Sbjct: 2714 VNNPCGRNALCSAEHHRQVCYCQPGYTGDPHAGCRLIDFCADNPCGPKARCHNSRGSFKC 2773

Query: 304  LCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAHCVKT 339
             CP GLVGDPY  GC    +C  D  CP                        P A C+  
Sbjct: 2774 QCPQGLVGDPYNEGCRPPVECNSDKDCPSVAKCDKTNGLHKCRDVCERTACGPNAECIAV 2833

Query: 340  DG---------------------VPK--------------------CKASCQSDEECGLG 358
            D                       PK                    C+  CQ+ EEC   
Sbjct: 2834 DHKGHCSCRNGYQGNPSDLSLGCTPKPVSCRHTSDCPANTYCYGDVCRPPCQTSEECIPS 2893

Query: 359  EKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVR--ITCLSHADC 416
            E+CLQGQC NPC+ + ACG+N+ C V  H K C CP GFTG+ + EC R  I+C S+ +C
Sbjct: 2894 EQCLQGQCLNPCDLRSACGMNAECRVSNHVKQCSCPPGFTGNQDVECFRLPISCSSNHNC 2953

Query: 417  YPGG----------------------------------------GSLCLANLCTRGCSAD 436
              G                                         G +C  N+C  GC  D
Sbjct: 2954 ASGYVCKKNLCHPECKVDNDCAFNEKCLKGNCILTCRVDNDCFLGHICHHNMCIFGCHND 3013

Query: 437  TDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPAL 496
             DC    SCR+ +CV+PC   PCGPNAQC+V+NHR  CSC    +  P+    CVR PA 
Sbjct: 3014 DDCTGTESCRNNKCVNPCLENPCGPNAQCTVSNHRATCSCGNNFVPNPTPKIGCVRAPAQ 3073

Query: 497  ECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
             C +NR C   G VC +  CR LCSSD GC +NE
Sbjct: 3074 PCTQNRDCD-PGNVCIEQSCRTLCSSDAGCFNNE 3106

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028268|gb|EGI68315.1| Neurogenic locus Notch protein [Acromyrmex echinatior]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 243/641 (37%), Positives = 316/641 (49%), Gaps = 162/641 (25%)

Query: 23   SAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY------------QS 70
            S AC D +C +PC    VCG  A+C+ +NH+  CTC  G  GDP              Q 
Sbjct: 417  SDACFDHKCVDPCSLSNVCGHGADCSSLNHSAVCTCQPGGTGDPNLGCTPLQYCKSDSQC 476

Query: 71   GVGTSCT---------SSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCT 121
              G+ C          S+RDCIG+Q CI+GLCQPTCRSN++CP   YC++ +CV E++CT
Sbjct: 477  ATGSVCNGGICTALCGSTRDCIGDQLCINGLCQPTCRSNSSCPEYQYCHNNICVQELRCT 536

Query: 122  THDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMG 181
            + + CS  E+C  N++GQ +CR AC+ ILCGRNA C A DH ATCSCK G+ G+      
Sbjct: 537  SDNDCSYDEKCIKNNIGQAECRRACDVILCGRNAECKADDHAATCSCKHGFFGN------ 590

Query: 182  TGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKIS 241
                                            +GC  +EC  + DC+ +K+C+ HRC+I+
Sbjct: 591  ---------------------------AKDDKIGCQPIECEVNDDCTQEKICDSHRCRIA 623

Query: 242  CLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSY 301
            CLA+NPCG NA+C+ EKH Q+C CQPGYTG+    C LID+CA  PC PGA C+N+RG +
Sbjct: 624  CLAHNPCGVNAICTTEKHVQVCTCQPGYTGEPTHACKLIDYCANAPCAPGALCENTRGHF 683

Query: 302  KCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKC---------------- 345
            KC C  G VGD Y +GC    +C +D  CP  A CV  + VPKC                
Sbjct: 684  KCHCQPGTVGDAYNSGCQPPVECLQDVDCPLTAKCVNINNVPKCFDTCARIRCGPNADCV 743

Query: 346  ----KASCQ------------------------SDEECGLGEKCLQGQCN---------- 367
                 ASCQ                        S  +C +   C +G C           
Sbjct: 744  ASNHAASCQCRADYEGDPNNLSVGCRPRPVVCSSQIDCLVNTYCYEGICRPSCQSDEECN 803

Query: 368  -----------NPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVR--ITCLSHA 414
                       +PC+ +G CG+N+ C V +H K C CP GFTG+ E ECVR  ++CL   
Sbjct: 804  LSDICLNGQCLDPCDVRGTCGINAECKVRSHIKQCSCPSGFTGNSEVECVRLPVSCLGSG 863

Query: 415  DCYPGG----------------------------------------GSLCLANLCTRGCS 434
            DC                                            G +CL N+C+ GC 
Sbjct: 864  DCNGDNTCRENVCLPICTVDNDCALNEKCIRGNCLLTCRLDNDCFLGHVCLNNMCSFGCR 923

Query: 435  ADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTP 494
            AD DC A  +C   +CV+PC   PCGPNA+C+V N R  CSC  G +  P+A  AC+RTP
Sbjct: 924  ADEDCNANEACLENKCVNPCEATPCGPNAKCTVFNQRATCSCSTGFIPNPTAKVACLRTP 983

Query: 495  ALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNESTGGS 535
               C+ NR C   G  C  G C P+CSS   CLSNE    S
Sbjct: 984  GPICQANRDCV-VGTACIAGVCTPVCSSSANCLSNERCDNS 1023

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204120|gb|EFN82989.1| Neurogenic locus notch-like protein protein 1 [Harpegnathos saltator]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 238/636 (37%), Positives = 318/636 (50%), Gaps = 164/636 (25%)

Query: 23   SAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY------------QS 70
            S AC D +C +PC    VCG  A+C+ +NH+  CTC  G  GDP              Q 
Sbjct: 421  SDACFDHKCVDPCSVSNVCGHGADCSSLNHSAVCTCQPGGTGDPNLGCTPVQYCKSDSQC 480

Query: 71   GVGTSCT---------SSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCT 121
              G++C          S+RDCIG+Q CI+GLCQPTCRSN++CP   YC++ +CV E++C 
Sbjct: 481  ATGSACNGGICTALCGSTRDCIGDQLCINGLCQPTCRSNSSCPEYQYCHNNICVQELRCI 540

Query: 122  THDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMG 181
            + + CS  E+C +N++GQ  C  AC+ ILCGRNA C A +H ATCSCK G+ G+      
Sbjct: 541  SDNDCSYDEKCINNNIGQAGCHKACDLILCGRNAECKADNHAATCSCKSGFFGN------ 594

Query: 182  TGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKIS 241
                                            +GC  +EC  + DC+ +K+C+ HRC+I+
Sbjct: 595  ---------------------------AKDDKIGCQPIECEVNDDCTQEKICDLHRCRIA 627

Query: 242  CLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSY 301
            CLA+NPCG NA+C+ EKH  +C CQPGYTG+    C LID+CA  PC PGA C+NSRG +
Sbjct: 628  CLAHNPCGTNAICTTEKH--VCTCQPGYTGEPTRACELIDYCANAPCAPGALCENSRGYF 685

Query: 302  KCLCPLGLVGD------------------PYGAGCVSASQCTR------DDQCPPGAHCV 337
            KC C  G VGD                  P  A CV+ +   +        +C P A C+
Sbjct: 686  KCHCQPGTVGDAYNSGCQPPVECLQDTDCPLTAKCVNVNNVPKCFDACARIKCGPNADCI 745

Query: 338  KTDGV---------------------PK--------------------CKASCQSDEECG 356
             ++                       PK                    C+ SCQSDEEC 
Sbjct: 746  ASNHAANCQCRADYEGDPSSLSIGCRPKPVVCTSHVDCSVNTYCYEGICRPSCQSDEECN 805

Query: 357  LGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVR--ITCLSHA 414
            L + CL GQC +PC+ + +CG+N+ C V +H K C CP GFTG+ E ECVR  ++CL   
Sbjct: 806  LTDVCLNGQCLDPCDVRVSCGINAECKVRSHIKQCSCPPGFTGNSEVECVRLPVSCLGSK 865

Query: 415  DCYPGG----------------------------------------GSLCLANLCTRGCS 434
            DC  G                                         G +CL N+C+ GC 
Sbjct: 866  DCSDGNTCRDNVCLPICTVDNECALNEKCIRGNCLLTCRLDNDCFLGHICLHNMCSFGCR 925

Query: 435  ADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTP 494
            AD DC A  +C   +C +PC   PCGPNA+C+V N R  CSCP G +  P+A  AC+R+P
Sbjct: 926  ADEDCNANEACLDNKCANPCEATPCGPNAKCTVFNQRATCSCPIGFIPNPTAKVACLRSP 985

Query: 495  ALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
               C+ NR C   G  C  G C  +CS++  CLSNE
Sbjct: 986  GPICQANRDC-AVGTACISGVCTAVCSTNANCLSNE 1020

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195117710|ref|XP_002003390.1| GI17886 [Drosophila mojavensis] gi|193913965|gb|EDW12832.1| GI17886 [Drosophila mojavensis]

 Score =  367 bits (943), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 238/636 (37%), Positives = 301/636 (47%), Gaps = 164/636 (25%)

Query: 22   ASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY------------- 68
            A  AC+D +C +PC     CG  A C+V NH   C C +G+ GD K              
Sbjct: 2505 ADKACLDAKCIDPCSLPNACGALARCSVQNHIGLCACESGSTGDAKQGCVQLQYCQQDAQ 2564

Query: 69   --QSGV------GTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQC 120
              Q  +         C+S+RDCI EQ C+ G+CQ TC+SN+TCP   +C + +C  E++C
Sbjct: 2565 CPQGSICAHGICSPLCSSNRDCIAEQLCLQGVCQSTCKSNSTCPQFQFCQNNICAKELEC 2624

Query: 121  TTHDQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPS 179
            +T+  C   E C  +  G+ +C P C G   CGRNA C A  H   C CK G++G     
Sbjct: 2625 STNGDCGEDETCLVDAYGRARCEPVCLGRAACGRNAECIARSHAPDCVCKEGFIGD---- 2680

Query: 180  MGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCK 239
                                               GC ++EC +  DCS DK C+++ CK
Sbjct: 2681 --------------------------------ARSGCRKIECTTDDDCSNDKSCDNNMCK 2708

Query: 240  ISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRG 299
            I+CL   PCG NALC+ E H+Q+C+CQPG++GD    C +IDFC   PCGPGARC NSRG
Sbjct: 2709 IACLIGQPCGENALCTTENHRQVCHCQPGFSGDPRVRCDVIDFCKDAPCGPGARCRNSRG 2768

Query: 300  SYKCLCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAH 335
            SYKC CPLGL+GDPY  GC S+ +C   D CP                        P A 
Sbjct: 2769 SYKCTCPLGLIGDPYNEGCRSSVECDSHDDCPPHAACVKTNGVPKCQDVCAQLQCGPNAE 2828

Query: 336  CVKT------------DGVPK-----------------------------CKASCQSDEE 354
            CV              DG P                              CK +C  D E
Sbjct: 2829 CVPKGHVAHCACRNGYDGQPADRVAGCKPLPMPCQITSDCPTNTYCSDSVCKPACLLDTE 2888

Query: 355  CGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHA 414
            C   E C  GQC +PC +  ACG N+ C +L+H K C CP GFTGD   ECVR+      
Sbjct: 2889 CTSSEVCQGGQCFDPCLQPLACGQNAQCQMLSHVKQCHCPEGFTGDATKECVRVPVACDG 2948

Query: 415  DCYPGG----------------------------------------GSLCLANLCTRGCS 434
            DC PG                                         G +CL N C  GC 
Sbjct: 2949 DCAPGYTCRDSMCLPVCHSDLECASNEKCLRGNCMLTCRVDNDCFLGHVCLHNKCVFGCH 3008

Query: 435  ADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTP 494
             D DC A+ SCR+ +CV+PC  +PCGPNA CSV+NHR  CSC   ++  P+A   CVR+P
Sbjct: 3009 VDDDCSASESCRNDKCVNPCLESPCGPNAACSVSNHRASCSCLDNMVPNPTAQVGCVRSP 3068

Query: 495  ALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
             LEC ENR C   G  C +  CRPLC+ D GCL+NE
Sbjct: 3069 PLECHENRDCS-NGLACFESVCRPLCADDAGCLTNE 3103

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195386886|ref|XP_002052135.1| GJ17387 [Drosophila virilis] gi|194148592|gb|EDW64290.1| GJ17387 [Drosophila virilis]

 Score =  367 bits (942), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 239/636 (37%), Positives = 298/636 (46%), Gaps = 164/636 (25%)

Query: 22   ASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY------------- 68
            A  AC+D +C +PC     CG  A C+V NH   C C +G+ GD K              
Sbjct: 2508 ADKACLDAKCIDPCSLPNACGALARCSVQNHIGVCACESGSTGDAKQGCVPLQYCQQDTQ 2567

Query: 69   --QSGV------GTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQC 120
              Q  +         C+S+RDCI EQ C+ G+C+ TC++NTTCP   +C + +CV EM+C
Sbjct: 2568 CPQGSICAHGICSPLCSSNRDCISEQLCLQGVCKSTCKTNTTCPQFQFCQNNICVKEMEC 2627

Query: 121  TTHDQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPS 179
            + +  C   E C  +  G+ +C   C G   CGRNA C A  H   C CK G+ G     
Sbjct: 2628 SVNSDCGEDETCLVDAYGRARCESVCLGRSACGRNAECIARSHEPDCICKEGFFGD---- 2683

Query: 180  MGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCK 239
                                               GC ++EC++ ADCS DK C++H CK
Sbjct: 2684 --------------------------------ARSGCRKIECSTDADCSNDKSCDNHMCK 2711

Query: 240  ISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRG 299
            I+CL   PCG NALC+ E H Q+C+CQPG++GD    C +IDFC   PCGPGARC NSRG
Sbjct: 2712 IACLIGQPCGENALCTTENHHQVCHCQPGFSGDPRIRCDIIDFCKDAPCGPGARCRNSRG 2771

Query: 300  SYKCLCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAH 335
            SYKC CP GLVGDPY  GC S+ +C   D CP                        P A 
Sbjct: 2772 SYKCTCPPGLVGDPYNEGCRSSVECETHDDCPPHAACTKTNGVPKCQDVCAQLQCGPNAE 2831

Query: 336  CVKT------------DGVPK-----------------------------CKASCQSDEE 354
            CV              DG P                              CK +C  D E
Sbjct: 2832 CVPKGHVAHCACRNGYDGQPADRLAGCKPLPMPCQITSDCPTNTYCSESVCKPACLLDTE 2891

Query: 355  CGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHA 414
            C   E C  GQC +PC++  ACG N+ C +L+H K C CP GFTGD   ECVR+      
Sbjct: 2892 CAPSEVCQGGQCFDPCQQPQACGQNAECLMLSHVKQCHCPEGFTGDAAKECVRVPVACDG 2951

Query: 415  DCYPGG----------------------------------------GSLCLANLCTRGCS 434
            DC PG                                         G +CL N C  GC 
Sbjct: 2952 DCAPGYTCRDSMCLPICHNDLECASNEKCLRGNCMLTCRVDNDCFLGHVCLHNKCVYGCH 3011

Query: 435  ADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTP 494
             D DC A+ SCR+ +CV+PC   PCGPNA CSV+NHR  CSC   ++  P+    CVRTP
Sbjct: 3012 VDDDCSASESCRNDKCVNPCVENPCGPNAVCSVSNHRASCSCLDNMVPNPTPQVGCVRTP 3071

Query: 495  ALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
             LEC ENR C   G  C +  CRPLC+ D GCL+NE
Sbjct: 3072 PLECHENRDCN-NGLACFESVCRPLCADDAGCLTNE 3106

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195052558|ref|XP_001993322.1| GH13743 [Drosophila grimshawi] gi|193900381|gb|EDV99247.1| GH13743 [Drosophila grimshawi]

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 239/636 (37%), Positives = 296/636 (46%), Gaps = 164/636 (25%)

Query: 22   ASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY------------- 68
            A  AC+D +C +PC     CG  A C+V NH   C C +G+ GD K              
Sbjct: 2532 ADKACLDAKCIDPCSLPNACGALAHCSVQNHIGLCACESGSTGDAKQGCVSLQYCQKDAQ 2591

Query: 69   --QSGV------GTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQC 120
              Q  +         C+S+RDCI EQ C+ G+CQPTC+SN+TCP   +C + +C  E++C
Sbjct: 2592 CPQGSICAHGICSPLCSSNRDCISEQLCLQGVCQPTCKSNSTCPQFQFCQNNICAKELEC 2651

Query: 121  TTHDQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPS 179
            T    C   E C  +  G+  C   C G   CGRNA C A  H   C CK G+ G     
Sbjct: 2652 TIDSDCGEDETCLVDAYGRAHCESVCLGRAACGRNAECVARSHAPDCVCKEGFFGD---- 2707

Query: 180  MGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCK 239
                                               GC ++ECNS  DCS DK C++H CK
Sbjct: 2708 --------------------------------ARSGCRKIECNSDEDCSNDKSCDNHMCK 2735

Query: 240  ISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRG 299
            I+CL   PCG NALC+ E H+Q+C+CQPG++GD    C +IDFC   PCGPGARC NSRG
Sbjct: 2736 IACLIGQPCGENALCTTENHRQVCHCQPGFSGDPRVHCDVIDFCKDAPCGPGARCRNSRG 2795

Query: 300  SYKCLCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAH 335
            SYKC CP  LVGDPY  GC S+ +C   D CP                        P A 
Sbjct: 2796 SYKCTCPPALVGDPYNEGCRSSVECETHDDCPPHAACTKTNGVPKCQDVCAHLQCGPNAE 2855

Query: 336  CVKT------------DGVPK-----------------------------CKASCQSDEE 354
            CV              DG P                              CK +C  D E
Sbjct: 2856 CVPKGHVAHCACRNGYDGQPADRVAGCKPLPVPCQITSDCPTNTYCSDSVCKPACFLDTE 2915

Query: 355  CGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHA 414
            CG  E C  GQC +PC++  ACG N+ C + +H K C CP GFTGD   ECVR+      
Sbjct: 2916 CGPSEVCQGGQCFDPCQQPQACGQNAECQMHSHVKQCHCPEGFTGDAGKECVRVPVACDG 2975

Query: 415  DCYPGG----------------------------------------GSLCLANLCTRGCS 434
            DC PG                                         G +CL N C  GC 
Sbjct: 2976 DCSPGYTCRDSMCLPVCHNDLECASNEKCLRGNCMLTCRVDNDCFLGHVCLHNKCVYGCH 3035

Query: 435  ADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTP 494
             D DC A+ SCR+ +C++PC   PCGPNA CSV+NHR  CSC   ++  P+    CVRTP
Sbjct: 3036 VDDDCSASESCRNDKCINPCLENPCGPNAACSVSNHRASCSCLDNMVPNPTPQVGCVRTP 3095

Query: 495  ALECEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
             LEC ENR C  +G  C +  CRPLC+ D GCL+NE
Sbjct: 3096 PLECHENRDCS-KGLACFESVCRPLCADDAGCLTNE 3130

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198475573|ref|XP_002132955.1| GA26108 [Drosophila pseudoobscura pseudoobscura] gi|198138883|gb|EDY70357.1| GA26108 [Drosophila pseudoobscura pseudoobscura]

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 240/633 (37%), Positives = 301/633 (47%), Gaps = 164/633 (25%)

Query: 25   ACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY------------QSGV 72
            AC+D +C +PC     CG  A C+V NH   C C +G+ GD K             Q   
Sbjct: 2510 ACLDAKCIDPCSLPNACGAQALCSVQNHIGVCACESGSTGDAKQGCVPLQYCQQDAQCAQ 2569

Query: 73   GTSCT---------SSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTH 123
            G+ C+         ++RDCI EQ C+ G+CQ TC+SNTTCP   +C++ +C  E++C  +
Sbjct: 2570 GSICSHGICSPLCSTNRDCISEQLCLQGVCQGTCKSNTTCPQFQFCSNNICTKELECGAN 2629

Query: 124  DQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGT 182
              C   E C+ +  G+ +C P C G   CGRNA C A  H   C CK G+ G        
Sbjct: 2630 TDCGEDETCQMDAYGRARCEPVCLGRAACGRNAECVARSHSPDCICKDGFFGD------- 2682

Query: 183  GPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISC 242
                                            GC ++EC+S  DCS DK C+++ CKI+C
Sbjct: 2683 -----------------------------AKSGCRKIECSSDEDCSNDKSCDNNMCKIAC 2713

Query: 243  LANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYK 302
            L   PCG NALC+ E H+Q+C+CQPG++GD    C +IDFC   PCGPGARC NSRGSYK
Sbjct: 2714 LIGQPCGDNALCTTEHHQQVCHCQPGFSGDPRVRCDVIDFCRDAPCGPGARCRNSRGSYK 2773

Query: 303  CLCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAHCVK 338
            C CP GLVGDPY  GC S+ +C  ++ CP                        P A CV 
Sbjct: 2774 CSCPPGLVGDPYNEGCRSSVECETNEDCPPHAACTKTNGVAKCHDVCAQLQCGPNAECVP 2833

Query: 339  T------------DGVPK-----------------------------CKASCQSDEECGL 357
                         DG P                              CK +C  D ECG 
Sbjct: 2834 KGHIAHCACRMGYDGQPADRVAGCKPLPVPCQVTGDCPTNTYCSDSVCKPACVLDTECGP 2893

Query: 358  GEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCY 417
             E C  GQC NPC +  ACG N+ C +L H K C CP GFTGD   ECVR+      DC 
Sbjct: 2894 SEVCQGGQCFNPCVQPQACGQNAECVMLNHLKQCHCPEGFTGDSSKECVRVPVACDGDCS 2953

Query: 418  PGG----------------------------------------GSLCLANLCTRGCSADT 437
            PG                                         G +CL N C  GC  D 
Sbjct: 2954 PGYTCRDSMCLPVCHNDLECASNEKCLRGNCMLTCRVDNDCFLGHVCLHNKCVYGCHVDD 3013

Query: 438  DCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALE 497
            DC A+ SCR+ +CV+PC  +PCGPNA CSV+NHR  CSC   ++  P+    CVRTP LE
Sbjct: 3014 DCSASESCRNDKCVNPCVESPCGPNAACSVSNHRATCSCLESMVPNPTPQVGCVRTPPLE 3073

Query: 498  CEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
            C ENR C G G  C +  CRPLC+ D GCL+NE
Sbjct: 3074 CRENRDC-GNGLACFESVCRPLCADDAGCLTNE 3105

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625922|ref|NP_001260039.1| dumpy, isoform X [Drosophila melanogaster] gi|440213324|gb|AGB92575.1| dumpy, isoform X [Drosophila melanogaster]

 Score =  364 bits (934), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 236/633 (37%), Positives = 298/633 (47%), Gaps = 164/633 (25%)

Query: 25   ACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY---------QSGV--- 72
            AC+D +C +PC     CG  A C+V NH   C+C AG+ GD K          Q G    
Sbjct: 2510 ACLDSKCIDPCSLPNACGALARCSVQNHIGVCSCEAGSTGDAKLGCVQLQYCQQDGQCAQ 2569

Query: 73   ---------GTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTH 123
                        C+++RDCI EQ C+ G+CQ TC+SN++CP   +C++ +C  E++C + 
Sbjct: 2570 GSICSHGICSPLCSTNRDCISEQLCLQGVCQGTCKSNSSCPQFQFCSNNICTKELECRSD 2629

Query: 124  DQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGT 182
             +C   E C S+  G+ +C   C G   CGRNA C A  H   C CK G+ G        
Sbjct: 2630 SECGEDETCLSDAYGRAKCESVCLGRAACGRNAECVARSHAPDCLCKEGFFGD------- 2682

Query: 183  GPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISC 242
                                            GC ++EC S  DCS DK C++H CKI+C
Sbjct: 2683 -----------------------------AKSGCRKIECTSDDDCSNDKSCDNHMCKIAC 2713

Query: 243  LANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYK 302
            L   PCG NALC+ E H+Q+C+CQPG++GD    C +IDFC   PCGPGARC N+RGSYK
Sbjct: 2714 LIGQPCGENALCTTEHHQQVCHCQPGFSGDPRVRCDVIDFCRDAPCGPGARCRNARGSYK 2773

Query: 303  CLCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAHCVK 338
            C CP GLVGDPY  GC S+ +C  ++ CP                        P A CV 
Sbjct: 2774 CTCPPGLVGDPYNEGCRSSVECETNEDCPPHAACTKTNGVAKCRDVCAQLQCGPNAECVP 2833

Query: 339  T------------DGVPK-----------------------------CKASCQSDEECGL 357
                         DG P                              CK +C  D ECG 
Sbjct: 2834 KGHVAQCACRSGYDGQPADRVAGCKPLPSPCQVTGDCPTNTYCSDSVCKPACVLDTECGA 2893

Query: 358  GEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCY 417
             E C  GQC NPC +  ACG N+ C +  H K C CP GFTGD   ECVR+      +C 
Sbjct: 2894 FEVCQGGQCFNPCLQPQACGQNAECVMQNHLKQCHCPEGFTGDSAKECVRVPVACDGECG 2953

Query: 418  PGG----------------------------------------GSLCLANLCTRGCSADT 437
            PG                                         G +CL N C  GC  D 
Sbjct: 2954 PGYTCRDSMCLPVCHNDLECASNEKCLKGSCMLTCRVDNDCFLGHVCLHNKCVYGCHVDD 3013

Query: 438  DCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALE 497
            DC A+ SCR+ +CV+PC   PCGPNA CSV+NHR  CSC   ++  P+    CVR+P LE
Sbjct: 3014 DCSASESCRNDKCVNPCLENPCGPNAACSVSNHRASCSCLESMVPNPTPQVGCVRSPPLE 3073

Query: 498  CEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
            C ENR C G G  C +  CRPLC+ D GCL+NE
Sbjct: 3074 CRENRDC-GNGLACFESVCRPLCADDAGCLTNE 3105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769086|ref|NP_001245875.1| dumpy, isoform I [Drosophila melanogaster] gi|383291323|gb|AFH03551.1| dumpy, isoform I [Drosophila melanogaster]

 Score =  363 bits (933), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 236/633 (37%), Positives = 298/633 (47%), Gaps = 164/633 (25%)

Query: 25   ACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY---------QSGV--- 72
            AC+D +C +PC     CG  A C+V NH   C+C AG+ GD K          Q G    
Sbjct: 2510 ACLDSKCIDPCSLPNACGALARCSVQNHIGVCSCEAGSTGDAKLGCVQLQYCQQDGQCAQ 2569

Query: 73   ---------GTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTH 123
                        C+++RDCI EQ C+ G+CQ TC+SN++CP   +C++ +C  E++C + 
Sbjct: 2570 GSICSHGICSPLCSTNRDCISEQLCLQGVCQGTCKSNSSCPQFQFCSNNICTKELECRSD 2629

Query: 124  DQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGT 182
             +C   E C S+  G+ +C   C G   CGRNA C A  H   C CK G+ G        
Sbjct: 2630 SECGEDETCLSDAYGRAKCESVCLGRAACGRNAECVARSHAPDCLCKEGFFGD------- 2682

Query: 183  GPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISC 242
                                            GC ++EC S  DCS DK C++H CKI+C
Sbjct: 2683 -----------------------------AKSGCRKIECTSDDDCSNDKSCDNHMCKIAC 2713

Query: 243  LANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYK 302
            L   PCG NALC+ E H+Q+C+CQPG++GD    C +IDFC   PCGPGARC N+RGSYK
Sbjct: 2714 LIGQPCGENALCTTEHHQQVCHCQPGFSGDPRVRCDVIDFCRDAPCGPGARCRNARGSYK 2773

Query: 303  CLCPLGLVGDPYGAGCVSASQCTRDDQCP------------------------PGAHCVK 338
            C CP GLVGDPY  GC S+ +C  ++ CP                        P A CV 
Sbjct: 2774 CTCPPGLVGDPYNEGCRSSVECETNEDCPPHAACTKTNGVAKCRDVCAQLQCGPNAECVP 2833

Query: 339  T------------DGVPK-----------------------------CKASCQSDEECGL 357
                         DG P                              CK +C  D ECG 
Sbjct: 2834 KGHVAQCACRSGYDGQPADRVAGCKPLPSPCQVTGDCPTNTYCSDSVCKPACVLDTECGA 2893

Query: 358  GEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCY 417
             E C  GQC NPC +  ACG N+ C +  H K C CP GFTGD   ECVR+      +C 
Sbjct: 2894 FEVCQGGQCFNPCLQPQACGQNAECVMQNHLKQCHCPEGFTGDSAKECVRVPVACDGECG 2953

Query: 418  PGG----------------------------------------GSLCLANLCTRGCSADT 437
            PG                                         G +CL N C  GC  D 
Sbjct: 2954 PGYTCRDSMCLPVCHNDLECASNEKCLKGSCMLTCRVDNDCFLGHVCLHNKCVYGCHVDD 3013

Query: 438  DCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALE 497
            DC A+ SCR+ +CV+PC   PCGPNA CSV+NHR  CSC   ++  P+    CVR+P LE
Sbjct: 3014 DCSASESCRNDKCVNPCLENPCGPNAACSVSNHRASCSCLESMVPNPTPQVGCVRSPPLE 3073

Query: 498  CEENRQCKGEGEVCADGRCRPLCSSDGGCLSNE 530
            C ENR C G G  C +  CRPLC+ D GCL+NE
Sbjct: 3074 CRENRDC-GNGLACFESVCRPLCADDAGCLTNE 3105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	535
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.876	21.31	0.328	5.5e-71
UNIPROTKB|P21783	2524	notch1 "Neurogenic locus notch	0.409	0.086	0.322	4.4e-25
WB|WBGene00013416	1714	Y64G10A.7 [Caenorhabditis eleg	0.828	0.258	0.266	3e-24
UNIPROTKB|G3X812	1994	NOTCH4 "Uncharacterized protei	0.867	0.232	0.270	2.9e-23
ZFIN|ZDB-GENE-081107-41	1315	si:ch73-105b23.1 "si:ch73-105b	0.702	0.285	0.285	7.8e-23
ZFIN|ZDB-GENE-090312-12	1513	megf6a "multiple EGF-like-doma	0.869	0.307	0.263	1.6e-22
MGI|MGI:97363	2531	Notch1 "notch 1" [Mus musculus	0.463	0.097	0.304	4.9e-22
UNIPROTKB|I3LVI7	504	NOTCH2 "Uncharacterized protei	0.484	0.513	0.278	7e-22
UNIPROTKB|A5A8X3	1994	NOTCH4 "Uncharacterized protei	0.867	0.232	0.263	1.4e-21
UNIPROTKB|J9PA37	1672	NOTCH4 "Uncharacterized protei	0.871	0.278	0.257	1.4e-21

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 745 (267.3 bits), Expect = 5.5e-71, P = 5.5e-71
 Identities = 170/518 (32%), Positives = 234/518 (45%)

Query:    25 ACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIG 84
             AC+D +C +PC     CG  A C+V NH   C+C AG+ GD K        C     C  
Sbjct:  2510 ACLDSKCIDPCSLPNACGALARCSVQNHIGVCSCEAGSTGDAKLGCVQLQYCQQDGQCAQ 2569

Query:    85 EQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMG-QMQCR 143
                C  G+C P C +N  C ++  C  G+C  +  C ++  C   + C +N    +++CR
Sbjct:  2570 GSICSHGICSPLCSTNRDCISEQLCLQGVC--QGTCKSNSSCPQFQFCSNNICTKELECR 2627

Query:   144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMXXXXXXXXXXXXXXXXXXLSPGA 203
                E   CG +  C  SD +    C+   +G                         +P  
Sbjct:  2628 SDSE---CGEDETCL-SDAYGRAKCESVCLGRAACGRNAECVARSH----------APDC 2673

Query:   204 TSHSSHSG-GPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQI 262
                    G    GC ++EC S  DCS DK C++H CKI+CL   PCG NALC+ E H+Q+
Sbjct:  2674 LCKEGFFGDAKSGCRKIECTSDDDCSNDKSCDNHMCKIACLIGQPCGENALCTTEHHQQV 2733

Query:   263 CYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSAS 322
             C+CQPG++GD    C +IDFC   PCGPGARC N+RGSYKC CP GLVGDPY  GC S+ 
Sbjct:  2734 CHCQPGFSGDPRVRCDVIDFCRDAPCGPGARCRNARGSYKCTCPPGLVGDPYNEGCRSSV 2793

Query:   323 QCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCL-QG---QC-------NNPCE 371
             +C  ++ CPP A C KT+GV KC+  C +  +CG   +C+ +G   QC         P +
Sbjct:  2794 ECETNEDCPPHAACTKTNGVAKCRDVC-AQLQCGPNAECVPKGHVAQCACRSGYDGQPAD 2852

Query:   372 RQGACG-VNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCT 430
             R   C  + S C V        CP   T   ++ C +  C+   +C  G   +C    C 
Sbjct:  2853 RVAGCKPLPSPCQVTGD-----CPTN-TYCSDSVC-KPACVLDTEC--GAFEVCQGGQCF 2903

Query:   431 RGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHR-PL-CSCPAGLMGLPSANT 488
               C     C     C     +  C   P G     +    R P+ C    G  G    ++
Sbjct:  2904 NPCLQPQACGQNAECVMQNHLKQCH-CPEGFTGDSAKECVRVPVACDGECG-PGYTCRDS 2961

Query:   489 ACVRTPALECEENRQCKGEGEVCADGRCRPLCSSDGGC 526
              C+  P   C  + +C    E C  G C   C  D  C
Sbjct:  2962 MCL--PV--CHNDLEC-ASNEKCLKGSCMLTCRVDNDC 2994

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|P21783 notch1 "Neurogenic locus notch protein homolog" [Xenopus laevis (taxid:8355)]

 Score = 241 (89.9 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
 Identities = 86/267 (32%), Positives = 115/267 (43%)

Query:   216 CHRVECNSHADCSGDKV----CE-DH-RCKISC-LAN----NPCGPNALCSAE--KHKQI 262
             C    C+S A C  D+V    CE  H R  + C L N    NPC   + C       K I
Sbjct:   338 CANAACHSGATCH-DRVASFYCECPHGRTGLLCHLDNACISNPCNEGSNCDTNPVNGKAI 396

Query:   263 CYCQPGYTGDAYFGCHL-IDFCA--AKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC- 318
             C C PGYTG A   C+  +D C+  A PC  G RC N+ GS++C CP G  G P    C 
Sbjct:   397 CTCPPGYTGPA---CNNDVDECSLGANPCEHGGRCTNTLGSFQCNCPQGYAG-PR---CE 449

Query:   319 VSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQC-NNPCERQGACG 377
             +  ++C   + C   + C+   G  +C   C    E GL  +    +C +NPC   G C 
Sbjct:   450 IDVNECL-SNPCQNDSTCLDQIGEFQC--ICMPGYE-GLYCETNIDECASNPCLHNGKC- 504

Query:   378 VNSLCNVLTHRKVCFCPRGFTGD----PETECVRITCLSHADCYPGGGSLCLANLCTRGC 433
                +  +   R  C CP GF+G+       EC    C + A C  G  S      CT G 
Sbjct:   505 ---IDKINEFR--CDCPTGFSGNLCQHDFDECTSTPCKNGAKCLDGPNSYTCQ--CTEGF 557

Query:   434 SADTDCPAALSCRSAECV-DPCSPAPC 459
             +    C   ++    EC+ DPC    C
Sbjct:   558 TG-RHCEQDIN----ECIPDPCHYGTC 579

GO:0005654 "nucleoplasm" evidence=TAS

WB|WBGene00013416 Y64G10A.7 [Caenorhabditis elegans (taxid:6239)]

 Score = 311 (114.5 bits), Expect = 3.0e-24, P = 3.0e-24
 Identities = 148/555 (26%), Positives = 209/555 (37%)

Query:    31 CRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVG---DPKYQSGV-GTSCTSSRDCI--- 83
             CR+ C+    C   A C  V  T  C C +G +G   + +   G+ G++C     C+   
Sbjct:  1144 CRHSCQ----CSNGASCDRV--TGFCDCPSGFMGKNCESECPEGLWGSNCMKHCLCMHGG 1197

Query:    84 ------GEQQCISGLCQPTC-------RSNTTCPAQHYCNSGL-CVLEM---QCT---TH 123
                   G+ +CI G   P+C       +    C  +  C +G  C  +    +C    + 
Sbjct:  1198 ECNKENGDCECIDGWTGPSCEFLCPFGQFGRNCAQRCNCKNGASCDRKTGRCECLPGWSG 1257

Query:   124 DQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHP--GPSMX 181
             + C   + C S   G  +C   CE   C   ALC     H  CSC+PG+ G     P + 
Sbjct:  1258 EHCE--KSCVSGHYGA-KCEETCE---CENGALCDPISGH--CSCQPGWRGKKCNRPCLK 1309

Query:   182 XXXXXXXXXXXXXXXXXLSPGATSHS-SHSGGPVGCHRVECNSHADCSGDKVCEDHRCKI 240
                                  A S S  H  G   C +     +A  S  ++C D     
Sbjct:  1310 GYFGRHCSQSCRC--------ANSKSCDHISGRCQCPK----GYAGHSCTELCPDGTFGE 1357

Query:   241 SCLANNPCGPNALCSAEKHKQICYCQPGYTG-DAYFGCHLIDF---CAAK-PCGPGARCD 295
             SC     CG N++C A   K  C+C+PG++G D   GC    F   C     C  G  CD
Sbjct:  1358 SCSQKCDCGENSMCDAISGK--CFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCD 1415

Query:   296 NSRGSYKCLCPLGLVGDPYGAGCVS---ASQCTRDDQCPPGAHCVKTDGVPKCKASCQSD 352
             +S GS  C+CP G +G      C S      C +   C  G  C +  G  +C     + 
Sbjct:  1416 SSTGS--CVCPPGYIGTKCEIACQSDRFGPTCEKICNCENGGTCDRLTGQCRCLPGF-TG 1472

Query:   353 EECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDP-ETECVR---- 407
               C   + C +G+    C+ +  C  N  CN  +    C C  GFTG   E  C      
Sbjct:  1473 MTCN--QVCPEGRFGAGCKEKCRCA-NGHCNASSGE--CKCNLGFTGPSCEQSCPSGKYG 1527

Query:   408 ITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAA-------LSCRSA----ECVDPCSP 456
             + C    +CY  G + C      +GC    DCP          SC +      C   CS 
Sbjct:  1528 LNCTLDCECY--GQARCDP---VQGCC---DCPPGRYGSRCQFSCPNGFYGWYCSQSCS- 1578

Query:   457 APCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRT---PAL--ECEENR-QCKG-EGE 509
               C   A C  A+ R  C CPAG  G       C      PA   +C   + +C   +G+
Sbjct:  1579 --CQNGAHCDGADGR--CLCPAGFQG-DKCEQKCSEGSFGPACSQQCNCGKYKCDATDGK 1633

Query:   510 -VCADGRCRPLCSSD 523
              +C  GR  PLC  +
Sbjct:  1634 CICPVGRHGPLCEEE 1648

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|G3X812 NOTCH4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 303 (111.7 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 148/547 (27%), Positives = 200/547 (36%)

Query:    20 GLASAACVDGRCRNPCEADEVCGRNAECAVVNH-TPRCTCVAGTVGDPKYQSGVGTSCTS 78
             G     C   + R+PC +   C +   C + +   PRC+C+ G  G+      +   C S
Sbjct:   106 GFTGDRC-QAQIRDPCSS--FCSKMGRCHLQDSGRPRCSCMPGWTGE---HCQLRDFC-S 158

Query:    79 SRDCIGEQQCISGLCQPTCRSNTTCPAQ---HYCNSGL--CVLEMQCTTHDQCSATEQCR 133
             +  C+    C++   Q  CR    CP     H C   +  C L+        C     C 
Sbjct:   159 ANPCVNGGVCLATYPQIQCR----CPPGFEGHACEHDVNECYLDP-----GPCPKGTTCH 209

Query:   134 SNDMGQMQCR-PAC-EGILCG-RNALCTASD--HHATCSCKPGYVGHPGPSMXXXXXXXX 188
              N +G  QC  PA  EG  CG R   CT     +  TC   PG                 
Sbjct:   210 -NTLGSCQCLCPAGREGPRCGLRPGPCTPRGCLNGGTCQLVPG-------RDSTFHLCLC 261

Query:   189 XXXXXXXXXXLSPG-ATSHSSHSGGPV--GCHRVECNSHADCSGDKVCED-HRCKISCLA 244
                       ++P     H   +GG    G     C      +G    ED   C++    
Sbjct:   262 PPGFTGPSCEVNPDDCAGHQCQNGGTCQDGLGTYTCLCPEAWTGWDCSEDVDECEVQ--- 318

Query:   245 NNP-CGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYK 302
               P C     C        C C  G+ G    GC   +D C A  C PG+ C +  GS+ 
Sbjct:   319 GPPRCRNGGTCQNSAGDFYCVCVSGWGGA---GCEENLDDCVAATCAPGSTCIDRVGSFS 375

Query:   303 CLCPLGLVGDPYGAGCVSASQ-CTRDDQCP--P--GAH-CVKTDGVPKCKASCQSD-EEC 355
             CLCP G  G       +  SQ C  + QC   P  G+  CV   G      +C  D +EC
Sbjct:   376 CLCPPGRTGLLCHMEDMCLSQPCHEEAQCSTNPLSGSTLCVCQPGYTG--PTCHQDLDEC 433

Query:   356 GLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHAD 415
              + +   QG   +PCE  G+C +N+  +       C CP G+TG    E     CLS   
Sbjct:   434 QMAQ---QGP--SPCEHGGSC-LNTPGSF-----ECLCPPGYTGS-RCEADHNECLSQP- 480

Query:   416 CYPGGGSLCLANLCTRGCSADTDCPAALSCRSAEC-VDPCSPAPCGPNAQCSVANHRPLC 474
             C+ GG   CL  L T  C     CP  L  +  E  +D C+ APC   A C    +   C
Sbjct:   481 CHRGG--TCLDLLATFQCL----CPPGLEGQLCEVEIDECASAPCLNQADCHDLLNGFQC 534

Query:   475 SCPAGLMGLPSANTACVRTPALECEENRQCKGE-GEV---CADGRCRPLCSSD-GGCLSN 529
              C  G  G P          +  C    +C+ + G     C  G   P C  +   CLS 
Sbjct:   535 ICQPGFTG-PRCEEDINECQSSPCANGGECQDQPGSFHCKCPPGFEGPRCQEEVDECLSG 593

Query:   530 ES-TGGS 535
                TG S
Sbjct:   594 PCPTGAS 600

GO:0030879 "mammary gland development" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-081107-41 si:ch73-105b23.1 "si:ch73-105b23.1" [Danio rerio (taxid:7955)]

 Score = 297 (109.6 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 128/448 (28%), Positives = 168/448 (37%)

Query:   110 NSGLCVLEMQCTTHD---QCSATEQCRSNDMGQ-MQCRPACE----GILCGRNALCTASD 161
             N+G C     CT  D    CS    CRS   G   QC    E    GI C  NA CT + 
Sbjct:    35 NNGDCHANALCTNKDGGRDCS----CRSGFSGNGFQCTDDNECARPGI-CHWNATCTNNP 89

Query:   162 HHATCSCKPGYVGHPGPSMXXXXXXXXXXXXXXXXXXLSPGATSHS-SHSG--GPVGCHR 218
                 C+C  GY G+ G  +                   +PG  S    + G     G + 
Sbjct:    90 GSYVCTCNSGYKGN-GNYLCLDVDECSE----------TPGVCSALLGYKGCKNLQGTYT 138

Query:   219 VECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCH 278
               CNS    +G    + + C+I     N C P A C+       C C  G+ G+    C 
Sbjct:   139 CLCNSGYQSNGQTCVDINECQI-----NFCSPFADCTNLPGSYRCTCPEGFNGNG-LACV 192

Query:   279 LIDFCAAK-PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCV 337
              I+ C  K  C P A C N  GSYKC C  G +G   G  C   ++C  D+ CP  A CV
Sbjct:   193 DINECDRKNSCDPNALCTNLLGSYKCSCRSGFLG--IGTKCTDINECATDNICPAVAACV 250

Query:   338 KTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQ-GACGVNSLCNVLTHRKVCFCPRG 396
              T G   C        +CG G    Q QC +  E   G C   + C  +     C C  G
Sbjct:   251 NTAGSFFC--------DCGQGYNFTQNQCVDLDECAIGLCSPYASCENMPGSYKCSCIAG 302

Query:   397 FTGDPETECVRIT-CLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRS-AECVD-- 452
             F GD    C  +  C++   C+    +LC+ +     CS    C    +    ++C D  
Sbjct:   303 FKGDGLV-CEDVDECVTEKRCHVN--ALCINSPGKYNCS----CMVGYTGNGVSQCTDIN 355

Query:   453 PC--SPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTAC-----VRTPALECEENRQCK 505
              C      C   A CS +     C CP+G   L + +T C      + P   C  N QC 
Sbjct:   356 ECLVDNGGCKNRATCSNSKGSYSCICPSGFR-LVN-HTTCQDIDECQLPEKVCGTNEQCT 413

Query:   506 G-EGEV---CADGRCRPL---CSSDGGC 526
               EG     C  G  R +   CS    C
Sbjct:   414 NLEGSYSCQCKAGFSRIIDDFCSDINEC 441

GO:0005509 "calcium ion binding" evidence=IEA

ZFIN|ZDB-GENE-090312-12 megf6a "multiple EGF-like-domains 6a" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 144/547 (26%), Positives = 189/547 (34%)

Query:    21 LASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVG---DPKYQSGV-GTSC 76
             + +A C  G     C     C  N  C   +   RC C AG  G   + +  +G+ G  C
Sbjct:   935 VCNATCEAGTFGPACSQTCRCHNNGTCDPADG--RCECGAGWTGSSCEQECSAGLYGVGC 992

Query:    77 TSSRDCIGEQQC--ISGLCQPTCRSNTT-------CPAQHYCNSGL-CVLEMQCTTHDQC 126
                  C     C  ISG C  TC S  T       C A H+   G+ C  + +C     C
Sbjct:   993 NQHCLCQNGGSCDRISGHC--TCVSGWTGVACELECAAGHF---GMDCQHKCECVNGGVC 1047

Query:   127 ---SATEQCRSNDMGQMQCRPAC-EGIL---CGRNALC--TASDHH--ATCSCKPGYVGH 175
                S    C +   G   C  AC +G     C     C   A+ HH   TC C  G+ G 
Sbjct:  1048 DRHSGRCLCPAGWTGT-HCETACTQGFYGPGCKERCRCDHNAACHHITGTCLCPAGWRGT 1106

Query:   176 PGPSMXXXXXXXXXXXXXXXXXXLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCED 235
                 +                    P  TS  +H  G  GC      S   C  +++C+ 
Sbjct:  1107 HCEKVCLPGSYGKRCAHRCQ----CPHGTS-CNHVTGQCGCPAGLTGS--GC--ERMCQS 1157

Query:   236 HRCKISCLANNPCGP-NALCSAEKHKQICYCQPGYTGD-AYFGCHLIDF---CAAK-PCG 289
                 ++C     C   N LC       +CYC PGY G      C    +   C  +  C 
Sbjct:  1158 GTFGVNCNQVCQCSELNQLCHPVTG--VCYCAPGYYGSKCETECEAGRYGPNCEQECQCL 1215

Query:   290 PGARCDNSRGSYKCLCPLGLVGDPYGAGCVSA---SQCTRDDQCPPGAHCVKTDGVPKCK 346
                 C +S G+  C CP G +G      C        C     C  GA      G   C+
Sbjct:  1216 NNGVCKSSTGT--CSCPPGFIGPNCNITCPLGRYGQDCAGVSLCGEGARSDPLTGRCVCR 1273

Query:   347 ASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDP-ETEC 405
             A  Q   +CG G  C +G     C+++  C    +C+ LT    C C  G+TGD  E  C
Sbjct:  1274 AG-QRGRDCGKG--CAEGWFGENCDQRCNCSNGGVCDALTGH--CSCTLGWTGDTCEEVC 1328

Query:   406 VR----ITCLSHADCYPGGG-----SLCLANLCTRGCSADTDCPAALSCRSAECVDPCSP 456
              R      C    DC           +CL +    G      CP         C   C  
Sbjct:  1329 PRGRYGSDCSEVCDCKNNSTCDRVTGVCLCSPGFYGHLCQHACPVGF--HGHRCQLLCD- 1385

Query:   457 APCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVC--ADG 514
               CG NA C     R  C CPAG  GL       + T   +C     C G+   C   +G
Sbjct:  1386 --CGANAPCDPETGR--CLCPAGYQGLRCERECELGTFGADCVHRCDCDGDTP-CDPING 1440

Query:   515 RCRPLCS 521
             RC  LC+
Sbjct:  1441 RC--LCA 1445

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:97363 Notch1 "notch 1" [Mus musculus (taxid:10090)]

 Score = 259 (96.2 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
 Identities = 86/282 (30%), Positives = 113/282 (40%)

Query:   248 CGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAAKPCGPGARCDNSRGSYKCLCP 306
             C    LC  E  K  C+CQ GYTG +Y  C   +D C+  PC  GA C +  G + C C 
Sbjct:  1116 CQHGGLCVDEGDKHYCHCQAGYTG-SY--CEDEVDECSPNPCQNGATCTDYLGGFSCKCV 1172

Query:   307 LGLVGDPYGAGCVSA-SQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQ 365
              G     +G+ C    ++C     C  G  C+      KC  SC    + G+  +     
Sbjct:  1173 AGY----HGSNCSEEINECL-SQPCQNGGTCIDLTNSYKC--SCPRGTQ-GVHCEINVDD 1224

Query:   366 CN---NPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGS 422
             C+   +P  R   C  N  C        C CP GF G+     V   CLS+  C P G  
Sbjct:  1225 CHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFVGERCEGDVN-ECLSNP-CDPRGTQ 1282

Query:   423 LCLANLCTRGCSADTDCPAALSCRSAECV-DPCSPAPCGPNAQCSVANHRP---LCSCPA 478
              C+  +    C    +C A  + R  E V + C   PC     C+VA++     +C CPA
Sbjct:  1283 NCVQRVNDFHC----ECRAGHTGRRCESVINGCRGKPCKNGGVCAVASNTARGFICRCPA 1338

Query:   479 GLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLC 520
             G  G    N A  RT    C   R C   G  C  G   P C
Sbjct:  1339 GFEGATCENDA--RT----CGSLR-CLNGG-TCISGPRSPTC 1372

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA;IMP

GO:0001047 "core promoter binding" evidence=IDA

GO:0001190 "RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription" evidence=IDA

GO:0001669 "acrosomal vesicle" evidence=ISO

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001708 "cell fate specification" evidence=IMP

GO:0001837 "epithelial to mesenchymal transition" evidence=IMP

GO:0001889 "liver development" evidence=IMP

GO:0001947 "heart looping" evidence=IGI

GO:0002040 "sprouting angiogenesis" evidence=IMP

GO:0002051 "osteoblast fate commitment" evidence=NAS

GO:0002052 "positive regulation of neuroblast proliferation" evidence=ISO

GO:0002193 "MAML1-RBP-Jkappa- ICN1 complex" evidence=ISO

GO:0002437 "inflammatory response to antigenic stimulus" evidence=IGI

GO:0003157 "endocardium development" evidence=IMP

GO:0003160 "endocardium morphogenesis" evidence=IMP

GO:0003162 "atrioventricular node development" evidence=IMP

GO:0003169 "coronary vein morphogenesis" evidence=IMP

GO:0003180 "aortic valve morphogenesis" evidence=ISO

GO:0003181 "atrioventricular valve morphogenesis" evidence=IMP

GO:0003184 "pulmonary valve morphogenesis" evidence=ISO

GO:0003192 "mitral valve formation" evidence=ISO

GO:0003198 "epithelial to mesenchymal transition involved in endocardial cushion formation" evidence=IMP

GO:0003203 "endocardial cushion morphogenesis" evidence=IMP

GO:0003207 "cardiac chamber formation" evidence=IMP

GO:0003208 "cardiac ventricle morphogenesis" evidence=IMP

GO:0003209 "cardiac atrium morphogenesis" evidence=IMP

GO:0003213 "cardiac right atrium morphogenesis" evidence=IMP

GO:0003214 "cardiac left ventricle morphogenesis" evidence=IMP

GO:0003219 "cardiac right ventricle formation" evidence=IMP

GO:0003222 "ventricular trabecula myocardium morphogenesis" evidence=IMP

GO:0003241 "growth involved in heart morphogenesis" evidence=IMP

GO:0003256 "regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation" evidence=IMP

GO:0003264 "regulation of cardioblast proliferation" evidence=ISO

GO:0003270 "Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation" evidence=IMP

GO:0003273 "cell migration involved in endocardial cushion formation" evidence=IMP

GO:0003344 "pericardium morphogenesis" evidence=IMP

GO:0003682 "chromatin binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0004857 "enzyme inhibitor activity" evidence=IDA

GO:0004872 "receptor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IMP;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=IC

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0006959 "humoral immune response" evidence=IGI

GO:0007219 "Notch signaling pathway" evidence=ISO;IC;IDA;IMP

GO:0007221 "positive regulation of transcription of Notch receptor target" evidence=ISO;IGI

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=ISO

GO:0007368 "determination of left/right symmetry" evidence=IMP

GO:0007386 "compartment pattern specification" evidence=IMP

GO:0007409 "axonogenesis" evidence=IMP;IDA

GO:0007440 "foregut morphogenesis" evidence=IMP

GO:0007492 "endoderm development" evidence=IMP

GO:0007507 "heart development" evidence=ISO;IMP

GO:0008284 "positive regulation of cell proliferation" evidence=ISO;IGI

GO:0008544 "epidermis development" evidence=IGI

GO:0009790 "embryo development" evidence=ISO

GO:0009912 "auditory receptor cell fate commitment" evidence=IMP

GO:0009986 "cell surface" evidence=IDA

GO:0010001 "glial cell differentiation" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0010718 "positive regulation of epithelial to mesenchymal transition" evidence=ISO;IMP

GO:0010812 "negative regulation of cell-substrate adhesion" evidence=ISO

GO:0010832 "negative regulation of myotube differentiation" evidence=IDA

GO:0014031 "mesenchymal cell development" evidence=IMP

GO:0014807 "regulation of somitogenesis" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019899 "enzyme binding" evidence=IPI

GO:0021915 "neural tube development" evidence=IMP

GO:0030154 "cell differentiation" evidence=IMP

GO:0030182 "neuron differentiation" evidence=IMP

GO:0030216 "keratinocyte differentiation" evidence=IMP

GO:0030279 "negative regulation of ossification" evidence=IMP

GO:0030324 "lung development" evidence=IMP

GO:0030326 "embryonic limb morphogenesis" evidence=IGI

GO:0030334 "regulation of cell migration" evidence=IMP

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IDA

GO:0030514 "negative regulation of BMP signaling pathway" evidence=IMP

GO:0030900 "forebrain development" evidence=IGI;IMP

GO:0031069 "hair follicle morphogenesis" evidence=IMP

GO:0031490 "chromatin DNA binding" evidence=IDA

GO:0032495 "response to muramyl dipeptide" evidence=IDA

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IMP

GO:0035914 "skeletal muscle cell differentiation" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=ISO

GO:0042640 "anagen" evidence=IMP

GO:0043065 "positive regulation of apoptotic process" evidence=IGI;IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0043086 "negative regulation of catalytic activity" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045165 "cell fate commitment" evidence=IMP

GO:0045596 "negative regulation of cell differentiation" evidence=IMP

GO:0045603 "positive regulation of endothelial cell differentiation" evidence=ISO

GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IGI;IDA

GO:0045662 "negative regulation of myoblast differentiation" evidence=ISO

GO:0045665 "negative regulation of neuron differentiation" evidence=ISO;IGI;IMP

GO:0045668 "negative regulation of osteoblast differentiation" evidence=IMP

GO:0045687 "positive regulation of glial cell differentiation" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IGI;IMP;IDA

GO:0045955 "negative regulation of calcium ion-dependent exocytosis" evidence=IMP

GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IDA

GO:0046533 "negative regulation of photoreceptor cell differentiation" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048103 "somatic stem cell division" evidence=IGI;IDA

GO:0048663 "neuron fate commitment" evidence=IGI

GO:0048708 "astrocyte differentiation" evidence=ISO

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IDA

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=IDA

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=IMP

GO:0050678 "regulation of epithelial cell proliferation" evidence=IMP

GO:0050679 "positive regulation of epithelial cell proliferation" evidence=IGI

GO:0050767 "regulation of neurogenesis" evidence=IMP

GO:0050768 "negative regulation of neurogenesis" evidence=IDA

GO:0050793 "regulation of developmental process" evidence=IEA

GO:0055008 "cardiac muscle tissue morphogenesis" evidence=IMP

GO:0060038 "cardiac muscle cell proliferation" evidence=IMP

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IMP

GO:0060253 "negative regulation of glial cell proliferation" evidence=IDA

GO:0060317 "cardiac epithelial to mesenchymal transition" evidence=IMP

GO:0060411 "cardiac septum morphogenesis" evidence=IMP

GO:0060412 "ventricular septum morphogenesis" evidence=ISO

GO:0060528 "secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development" evidence=IMP

GO:0060548 "negative regulation of cell death" evidence=IMP

GO:0060740 "prostate gland epithelium morphogenesis" evidence=IMP

GO:0060768 "regulation of epithelial cell proliferation involved in prostate gland development" evidence=IMP

GO:0060842 "arterial endothelial cell differentiation" evidence=IMP

GO:0060843 "venous endothelial cell differentiation" evidence=IMP

GO:0060948 "cardiac vascular smooth muscle cell development" evidence=IMP

GO:0060956 "endocardial cell differentiation" evidence=IMP

GO:0060979 "vasculogenesis involved in coronary vascular morphogenesis" evidence=IMP

GO:0060982 "coronary artery morphogenesis" evidence=IMP

GO:0061314 "Notch signaling involved in heart development" evidence=IGI;ISO;IMP

GO:0061344 "regulation of cell adhesion involved in heart morphogenesis" evidence=IC

GO:0061384 "heart trabecula morphogenesis" evidence=IMP

GO:0061419 "positive regulation of transcription from RNA polymerase II promoter in response to hypoxia" evidence=IDA

GO:0070986 "left/right axis specification" evidence=IGI

GO:0071372 "cellular response to follicle-stimulating hormone stimulus" evidence=ISO

GO:0072602 "interleukin-4 secretion" evidence=IGI

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IMP

GO:1901189 "positive regulation of ephrin receptor signaling pathway" evidence=IC

GO:1901201 "regulation of extracellular matrix assembly" evidence=IMP

GO:2000737 "negative regulation of stem cell differentiation" evidence=ISO

GO:2000811 "negative regulation of anoikis" evidence=ISO

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=IMP

UNIPROTKB|I3LVI7 NOTCH2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 224 (83.9 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
 Identities = 85/305 (27%), Positives = 127/305 (41%)

Query:   220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL 279
             +CN     SG   CE         A+NPC  + +C    ++  C C PG+TG     C++
Sbjct:   210 QCNCQPGTSGVN-CE---INFDDCASNPC-VHGVCVDGVNRYSCVCSPGFTGQR---CNI 261

Query:   280 -IDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS-ASQCTRDDQCPPGAHCV 337
              ID CA+ PC  GA C N    ++C+CP G    P+   C S  ++C   + C  G +C 
Sbjct:   262 DIDECASNPCRKGATCINDVNGFRCMCPEG----PHHPSCYSQVNECL-SNPCIHG-NC- 314

Query:   338 KTDGVPKCKASCQSDEECGLGEKCLQGQC-NNPCERQGACGVNSLCNVLTHRKVCFCPRG 396
              T G+   K  C +    G+  +  + +C ++PC+  G C  ++L N   +R  C C +G
Sbjct:   315 -TGGLSGYKCLCDAGW-VGINCEVDKNECLSDPCQNGGTC--DNLVN--GYR--CTCKKG 366

Query:   397 FTGDP----ETECVRITCLSHADCYPG-GGSLCLANLCTRGCSADT--------DCPAAL 443
             F G        EC    CL+   C+    G  C   L   G +  T         C  A 
Sbjct:   367 FKGHNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAA 426

Query:   444 SCRSAECVDP--CSPAPCGPNAQCSVANHRPLCS-CPA-GLMGLPSANTACVRTPA---L 496
              C+ A   +   C  AP     +CSV     +   C   GL      +  C   P    +
Sbjct:   427 VCKEAPNFESYTCLCAPGWQGQRCSVDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGM 486

Query:   497 ECEEN 501
             +CEE+
Sbjct:   487 DCEED 491

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|A5A8X3 NOTCH4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 288 (106.4 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 144/546 (26%), Positives = 201/546 (36%)

Query:    20 GLASAACVDGRCRNPCEADEVCGRNAECAV-VNHTPRCTCVAGTVGDP-KYQSGVGTS-C 76
             G     C   + ++PC +   C +   C +  +  PRCTC+ G  G+  +++     + C
Sbjct:   107 GFTGERC-QAQVKDPCSS--FCSKMGRCHIEASGRPRCTCMPGWTGEQCQHRDFCSANPC 163

Query:    77 TSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSND 136
              +   C+     I   C P    +T C  +H  N   C L         C     C  N 
Sbjct:   164 VNGGVCLATYPQIQCHCPPGFEGHT-C--EHDVNE--CFLNP-----GPCPKGTSCY-NT 212

Query:   137 MGQMQCR-PAC-EGILCG-RNALCTASD--HHATCSCKPGYVGHPGPSMXXXXXXXXXXX 191
             +G  QC  P   +G  C  +   C      +  TC   PG                    
Sbjct:   213 LGSFQCLCPVGRDGPRCELQPGPCPPRGCLNGGTCQLVPG-------RDSTFHLCLCPPG 265

Query:   192 XXXXXXXLSPG-ATSHSSHSGG----PVGCHRVECN---SHADCSGDKVCEDHRCKISCL 243
                    ++P     H   +GG     +G H   C    +  DCS D V E   C+   +
Sbjct:   266 FTGASCEVNPDDCVGHQCQNGGICQDGLGTHTCLCPEAWTGWDCSED-VDE---CEAQGV 321

Query:   244 ANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYK 302
                 C     C        C C  G+ G     C   +D CAA  C PG+ C +  GS+ 
Sbjct:   322 PR--CRNGGTCQNSAGSFHCVCVSGWGGT---DCEENLDDCAAATCAPGSTCIDRVGSFS 376

Query:   303 CLCPLGLVGDPYGAGCVSASQ-CTRDDQCP--P--GAH-CVKTDGVPKCKASCQSD-EEC 355
             CLCP G  G       +  SQ C  + QC   P  G+  C+   G      +C  D +EC
Sbjct:   377 CLCPPGRTGLLCHMEDMCLSQPCHGEAQCSTNPLTGSTLCLCQPGYTG--PTCHQDLDEC 434

Query:   356 GLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHAD 415
              + +   QG   +PCE  G+C +N+  +       C CP G+TG    E     CLS   
Sbjct:   435 QMAQ---QGP--SPCEHGGSC-LNTPGSF-----ECLCPPGYTGS-RCEADHNECLSQP- 481

Query:   416 CYPGGGSLCLANLCTRGCSADTDCPAALSCRSAEC-VDPCSPAPCGPNAQCSVANHRPLC 474
             C+PG  S CL  L T  C     CP  L  R  E   D C+ APC   A C    +   C
Sbjct:   482 CHPG--STCLDLLATFHCL----CPPGLEGRLCEVETDECASAPCLNQADCHDLPNGFRC 535

Query:   475 SCPAGLMGLPSANTACVRTPALECEENRQCKGE-GEV---CADGRCRPLCSSD-GGCLSN 529
              C  G  G P          +  C    QC+ + G     C  G   P C ++   CLS+
Sbjct:   536 VCQPGFTG-PRCEEDINECRSSPCANGGQCQDQPGSFHCECLPGFEGPRCQTEVDECLSS 594

Query:   530 ESTGGS 535
                 G+
Sbjct:   595 PCPSGA 600

GO:0030879 "mammary gland development" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|J9PA37 NOTCH4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 287 (106.1 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 140/544 (25%), Positives = 180/544 (33%)

Query:    16 QQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTS 75
             Q   G     CV G     CE +       +CA     P  TC+   VG           
Sbjct:   204 QNSAGSFHCVCVSGWGGTGCEENL-----DDCAAATCAPGSTCI-DRVGS------FSCL 251

Query:    76 CTSSRD---CIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQC 132
             C   R    C  E  C+S   QP C     C       S LC+ +   +        ++C
Sbjct:   252 CPPGRTGLLCHMEDMCLS---QP-CHGEAQCSTNPLTGSTLCLCQPGYSGPTCHQDLDEC 307

Query:   133 RSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVG------HPGPSMXXXXXX 186
             +   M Q    P CE    G + L T    +  C C PGY G      H           
Sbjct:   308 Q---MAQQGPSP-CEH---GGSCLNTPGSFN--CLCPPGYTGSRCEADHNECLSQPCHPG 358

Query:   187 XXXXXXXXXXXXLSPGATSHSSHSGGPVGCHRVECNSHADCSGDK-----VC----EDHR 237
                         L P              C    C + ADC         VC       +
Sbjct:   359 STCLDLLATFHCLCPPGLEGQFCEVETDECASAPCLNQADCHDGLNSFLCVCLPGFTGSQ 418

Query:   238 CK--ISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARC 294
             C+  I+  A++PC     C  +     C C PG+ G     C   +D C + PC  GA C
Sbjct:   419 CEEDINECASSPCANGGQCQDQPGSFHCECLPGFEGPH---CQAEVDECLSGPCPTGASC 475

Query:   295 DNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEE 354
              +  G++ CLCP G  G        + S C    +C   AHC+  DG P C A  + +  
Sbjct:   476 LDLPGAFSCLCPSGFTGHLCEVPLCAPSLCQPKQKCQDKAHCLCPDGSPGC-APIEDNCT 534

Query:   355 CGLGEKCLQGQC------NNP-CERQ-GAC-GV----NSLCNVLTHRKVCFCPRGFTGDP 401
             C  G  C +  C        P CE + G C  V       C+       C CP G TG  
Sbjct:   535 CHHGH-CQRSSCVCDVGWTGPACEAELGGCISVPCAHGGTCHPQPSGYNCTCPPGHTGPT 593

Query:   402 ETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGP 461
              +E   +T      C  GG   C  +   RG S  T  P+    R     D C+ APC  
Sbjct:   594 CSE--EVTACHSGPCLNGGS--CSPS--PRGYSC-TCPPSHTGPRCQTSTDHCASAPCLN 646

Query:   462 NAQCSVANHRPLCSCPAGLMGLPSANTACVRTPALECEENRQCKGEGEVCADGRCRPLCS 521
                C        C C AG  G P     C       C +N  C+     C DG   P C 
Sbjct:   647 GGACVNRPGTSSCLCAAGFQG-PH----CEERTRPSCADN-PCRNRA-TCQDGPQGPHCL 699

Query:   522 SDGG 525
                G
Sbjct:   700 CSPG 703

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	535
KOG1217|consensus	487		99.44
KOG4289|consensus	2531		99.39
KOG1214|consensus	1289		99.38
KOG1214|consensus	1289		99.32
KOG4289|consensus	2531		99.28
KOG1217|consensus	487		99.25
KOG1219|consensus	4289		99.1
KOG1219|consensus	4289		99.09
KOG1225|consensus	525		98.98
KOG1225|consensus	525		98.91
KOG4260|consensus	350		98.59
KOG4260|consensus	350		98.39
KOG0994|consensus	1758		98.32
KOG0994|consensus	1758		97.95
KOG1226|consensus	783		97.75
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.71
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.7
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.57
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.56
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.47
KOG1226|consensus	783		97.39
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.26
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.19
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.02
KOG1836|consensus	1705		97.0
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.97
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.85
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.75
smart00181	35	EGF Epidermal growth factor-like domain.	96.69
PF12662	24	cEGF: Complement Clr-like EGF-like	96.61
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.34
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.2
PF12662	24	cEGF: Complement Clr-like EGF-like	96.2
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.12
smart00181	35	EGF Epidermal growth factor-like domain.	96.07
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	95.9
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	95.77
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	94.08
smart00051	63	DSL delta serrate ligand.	94.07
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	92.2
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	92.12
KOG1836|consensus	1705		90.78
smart00051	63	DSL delta serrate ligand.	82.08
PHA02887	126	EGF-like protein; Provisional	81.97

>KOG1217|consensus

Probab=99.44  E-value=1.7e-11  Score=131.20  Aligned_cols=275  Identities=28%  Similarity=0.602  Sum_probs=177.9

Q ss_pred             CCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCccCCCCCCCCcc
Q psy9424          41 CGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQC  120 (535)
Q Consensus        41 C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~~~~C~~g~~C  120 (535)
                      ...++.++.....+.|.|++||.|..+..   .      ..|+....        .+.....|.....            
T Consensus        97 ~~~~~~~~~~~~~~~c~c~~g~~~~~~~~---~------~~C~~~~~--------~~~~~~~c~~~~~------------  147 (487)
T KOG1217|consen   97 LLLCGECVDCVGSYECTCPPGYQGTPCEG---E------CECVTGPG--------VCCIDGSCSNGPG------------  147 (487)
T ss_pred             ccCCccccCCCCCceeeCCCccccCcCCc---c------eeecCCCC--------CeeCchhhcCCCC------------
Confidence            34456667777889999999999985541   0      01222111        0001111111110            


Q ss_pred             ccCCCCCCCCccCCCCCCCCccc--CCCCC--CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         121 TTHDQCSATEQCRSNDMGQMQCR--PACEG--ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHG  196 (535)
Q Consensus       121 ~~~~~c~~~~~C~~~~~G~~~c~--~~C~~--~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~  196 (535)
                         ........|..+|.+.....  ++|..  .+|.+.+.|.+..++|.|.|++||.+..++.                 
T Consensus       148 ---~~~~~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~-----------------  207 (487)
T KOG1217|consen  148 ---SVGPFRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCET-----------------  207 (487)
T ss_pred             ---CCCceeeeeCCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcC-----------------
Confidence               00123346666777665443  58873  5699999999999889999999999988431                 


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCC
Q psy9424         197 PGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFG  276 (535)
Q Consensus       197 ~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~  276 (535)
                                                                       .  .+++.|++.   +.|.+.++|.+..+. 
T Consensus       208 -------------------------------------------------~--~~~~~c~~~---~~~~~~~g~~~~~c~-  232 (487)
T KOG1217|consen  208 -------------------------------------------------T--GNGGTCVDS---VACSCPPGARGPECE-  232 (487)
T ss_pred             -------------------------------------------------C--CCCceEecc---eeccCCCCCCCCCcc-
Confidence                                                             0  122344333   568888998876432 


Q ss_pred             CeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccC
Q psy9424         277 CHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECG  356 (535)
Q Consensus       277 C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~  356 (535)
                       ..+.++...   . ++|.+..++|+|.+++||++... ..+.++++|...                             
T Consensus       233 -~~~~~~~~~---~-~~c~~~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~-----------------------------  277 (487)
T KOG1217|consen  233 -VSIVECASG---D-GTCVNTVGSYTCRCPEGYTGDAC-VTCVDVDSCALI-----------------------------  277 (487)
T ss_pred             -cccccccCC---C-CcccccCCceeeeCCCCcccccc-ceeeeccccCCC-----------------------------
Confidence             334444333   4 78999999999999999988762 112233333221                             


Q ss_pred             CCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCC------CCCC----ccCCCCCCcccCCC---CCc
Q psy9424         357 LGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPE------TECV----RITCLSHADCYPGG---GSL  423 (535)
Q Consensus       357 ~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~------~~C~----~~~C~~~~~C~~~~---g~~  423 (535)
                                      . .|.++++|+++.+.|.|.|++||+|..+      .+|.    ..+|.++++|....   .+.
T Consensus       278 ----------------~-~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~  340 (487)
T KOG1217|consen  278 ----------------A-SCPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFR  340 (487)
T ss_pred             ----------------C-ccCCCCeeecCCCcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccCCCCCCCC
Confidence                            1 1455667777777799999999999986      2453    22577777883322   245


Q ss_pred             cCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeee-CCCCceeeCCCCCcCC
Q psy9424         424 CLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSV-ANHRPLCSCPAGLMGL  483 (535)
Q Consensus       424 C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~G~  483 (535)
                      |.   +..++       .|..|+..  .++|...++.+++.|++ ..++|.|.|+.+|.+.
T Consensus       341 C~---c~~~~-------~g~~C~~~--~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~~  389 (487)
T KOG1217|consen  341 CA---CGPGF-------TGRRCEDS--NDECASSPCCPGGTCVNETPGSYRCACPAGFAGK  389 (487)
T ss_pred             cC---CCCCC-------CCCccccC--CccccCCccccCCEeccCCCCCeEecCCCccccC
Confidence            76   66665       78888873  25898778999999999 6899999999999985

>KOG4289|consensus

Probab=99.39  E-value=8.6e-12  Score=137.13  Aligned_cols=110  Identities=28%  Similarity=0.709  Sum_probs=83.1

Q ss_pred             CCCCCCCCCCCCeec----------------------cCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCT----------------------ASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSP  201 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~----------------------~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~  201 (535)
                      +.|+..||.+..+|+                      +..+++.|.|++||+|+.|++.                     
T Consensus      1180 niClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTe--------------------- 1238 (2531)
T KOG4289|consen 1180 NICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETE--------------------- 1238 (2531)
T ss_pred             chhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccch---------------------
Confidence            566667777766663                      3346788999999999997632                     


Q ss_pred             CCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee--
Q psy9424         202 GATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL--  279 (535)
Q Consensus       202 ~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~--  279 (535)
                                            ++.|.                +.+|.++++|....|.|+|.|.+||+|+   .|+.  
T Consensus      1239 ----------------------iDlCY----------------s~pC~nng~C~srEggYtCeCrpg~tGe---hCEvs~ 1277 (2531)
T KOG4289|consen 1239 ----------------------IDLCY----------------SGPCGNNGRCRSREGGYTCECRPGFTGE---HCEVSA 1277 (2531)
T ss_pred             ----------------------hHhhh----------------cCCCCCCCceEEecCceeEEecCCcccc---ceeeec
Confidence                                  34443                5789999999999999999999999999   4543  


Q ss_pred             -CCcCCCCCCCCCCeeecCC-CCeeeeCCCC-CccCCCC
Q psy9424         280 -IDFCAAKPCGPGARCDNSR-GSYKCLCPLG-LVGDPYG  315 (535)
Q Consensus       280 -~~~C~~~~C~~~~~C~~~~-g~~~C~C~~G-y~g~~c~  315 (535)
                       .-.|.+..|.++++|++.. +.+.|.|+.| |++..|+
T Consensus      1278 ~agrCvpGvC~nggtC~~~~nggf~c~Cp~ge~e~prC~ 1316 (2531)
T KOG4289|consen 1278 RAGRCVPGVCKNGGTCVNLLNGGFCCHCPYGEFEDPRCE 1316 (2531)
T ss_pred             ccCccccceecCCCEEeecCCCceeccCCCcccCCCceE
Confidence             3457777899999998875 7888999887 4444443

>KOG1214|consensus

Probab=99.38  E-value=6.2e-12  Score=132.48  Aligned_cols=123  Identities=28%  Similarity=0.682  Sum_probs=88.4

Q ss_pred             cCCCCC--CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424         143 RPACEG--ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE  220 (535)
Q Consensus       143 ~~~C~~--~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~  220 (535)
                      +++|+.  +.|+.+++|++.+++|+|.|..||.-..                           .+        .+|..+.
T Consensus       734 ~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~d---------------------------d~--------~tCV~i~  778 (1289)
T KOG1214|consen  734 ENECATGFHRCGPNSVCINLPGSYRCECRSGYEFAD---------------------------DR--------HTCVLIT  778 (1289)
T ss_pred             hhhhccCCCCCCCCceeecCCCceeEEEeecceecc---------------------------CC--------cceEEec
Confidence            455654  6789999999999999999999875433                           00        1222221


Q ss_pred             C-CCCCCCCCCCcccCCCcccCCCCCCCCCCC--CccccCC-CCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeec
Q psy9424         221 C-NSHADCSGDKVCEDHRCKISCLANNPCGPN--ALCSAEK-HKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDN  296 (535)
Q Consensus       221 C-~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~--~~C~~~~-g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~  296 (535)
                      = .....|..+              +..|...  ++|+... ++|.|.|.|||.|++.. |.++|+|.++.|...++|.+
T Consensus       779 ~pap~n~Ce~g--------------~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~-c~dvDeC~psrChp~A~Cyn  843 (1289)
T KOG1214|consen  779 PPAPANPCEDG--------------SHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQ-CTDVDECSPSRCHPAATCYN  843 (1289)
T ss_pred             CCCCCCccccC--------------ccccCcCCceEEEecCCceEEEeecCCccCCccc-cccccccCccccCCCceEec
Confidence            0 011122111              2445444  3555544 56999999999999875 88899999999999999999


Q ss_pred             CCCCeeeeCCCCCccCCCC
Q psy9424         297 SRGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       297 ~~g~~~C~C~~Gy~g~~c~  315 (535)
                      +++++.|+|.+||.|+...
T Consensus       844 tpgsfsC~C~pGy~GDGf~  862 (1289)
T KOG1214|consen  844 TPGSFSCRCQPGYYGDGFQ  862 (1289)
T ss_pred             CCCcceeecccCccCCCce
Confidence            9999999999999998765

>KOG1214|consensus

Probab=99.32  E-value=1.1e-11  Score=130.76  Aligned_cols=136  Identities=24%  Similarity=0.503  Sum_probs=102.4

Q ss_pred             ccCCCccCCCCCC--CcccCcCCcCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCC---
Q psy9424          10 QISQHLQQVPGLA--SAACVDGRCRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCI---   83 (535)
Q Consensus        10 ~~~~~c~c~~g~~--g~~C~~~~~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~---   83 (535)
                      .++..|+|..||.  |++|++   +++|+. ...|..+.+|++..++|+|.|..||.-.+           +...|+   
T Consensus       713 ~~~~tcecs~g~~gdgr~c~d---~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~d-----------d~~tCV~i~  778 (1289)
T KOG1214|consen  713 GVDYTCECSSGYQGDGRNCVD---ENECATGFHRCGPNSVCINLPGSYRCECRSGYEFAD-----------DRHTCVLIT  778 (1289)
T ss_pred             CcceEEEEeeccCCCCCCCCC---hhhhccCCCCCCCCceeecCCCceeEEEeecceecc-----------CCcceEEec
Confidence            3556799999997  788998   899997 77899999999999999999999986432           112343   


Q ss_pred             ---CCCccccCccCCCCCCCCCC--CC-CCCccCCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCee
Q psy9424          84 ---GEQQCISGLCQPTCRSNTTC--PA-QHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALC  157 (535)
Q Consensus        84 ---~~~~C~~~~c~~~C~~~~~C--~~-~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C  157 (535)
                         .++.|..+.  |.|...+.+  +. +..-|.+.|.+||.       +++..|.        ++|+|+.+.|..++.|
T Consensus       779 ~pap~n~Ce~g~--h~C~i~g~a~c~~hGgs~y~C~CLPGfs-------GDG~~c~--------dvDeC~psrChp~A~C  841 (1289)
T KOG1214|consen  779 PPAPANPCEDGS--HTCAIAGQARCVHHGGSTYSCACLPGFS-------GDGHQCT--------DVDECSPSRCHPAATC  841 (1289)
T ss_pred             CCCCCCccccCc--cccCcCCceEEEecCCceEEEeecCCcc-------CCccccc--------cccccCccccCCCceE
Confidence               344566666  677765544  22 23344555555555       4444443        4899999999999999


Q ss_pred             ccCCCCceecCCCCCCCCC
Q psy9424         158 TASDHHATCSCKPGYVGHP  176 (535)
Q Consensus       158 ~~~~~~~~C~C~~Gf~g~~  176 (535)
                      ++++++|.|+|.+||.|++
T Consensus       842 yntpgsfsC~C~pGy~GDG  860 (1289)
T KOG1214|consen  842 YNTPGSFSCRCQPGYYGDG  860 (1289)
T ss_pred             ecCCCcceeecccCccCCC
Confidence            9999999999999999998

>KOG4289|consensus

Probab=99.28  E-value=2.8e-11  Score=133.21  Aligned_cols=85  Identities=34%  Similarity=0.802  Sum_probs=69.1

Q ss_pred             CCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEE
Q psy9424         257 EKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHC  336 (535)
Q Consensus       257 ~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C  336 (535)
                      +.+.++|.|+|||+|+.++  +.+|.|.+.||.++++|...+|+|+|.|++||+|..|+..- ..-.|. +..|.++++|
T Consensus      1218 pvnglrCrCPpGFTgd~Ce--TeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~-~agrCv-pGvC~nggtC 1293 (2531)
T KOG4289|consen 1218 PVNGLRCRCPPGFTGDYCE--TEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSA-RAGRCV-PGVCKNGGTC 1293 (2531)
T ss_pred             ccCceeEeCCCCCCccccc--chhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeec-ccCccc-cceecCCCEE
Confidence            3467899999999999554  45999999999999999999999999999999999988421 123454 3689999999


Q ss_pred             ec-CCCCCcc
Q psy9424         337 VK-TDGVPKC  345 (535)
Q Consensus       337 ~~-~~g~~~C  345 (535)
                      ++ ..|.|.|
T Consensus      1294 ~~~~nggf~c 1303 (2531)
T KOG4289|consen 1294 VNLLNGGFCC 1303 (2531)
T ss_pred             eecCCCceec
Confidence            98 4555555

>KOG1217|consensus

Probab=99.25  E-value=2.5e-10  Score=122.22  Aligned_cols=246  Identities=28%  Similarity=0.644  Sum_probs=160.1

Q ss_pred             CCCccCCCCCCCcccCcCCcCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCC--cc
Q psy9424          12 SQHLQQVPGLASAACVDGRCRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQ--QC   88 (535)
Q Consensus        12 ~~~c~c~~g~~g~~C~~~~~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~--~C   88 (535)
                      ...++|..||.+..+...  .++|.. ..+|.+++.|.+..++|.|.|++||++..+..   .   .....|++..  .+
T Consensus       151 ~~~c~C~~g~~~~~~~~~--~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~---~---~~~~~c~~~~~~~~  222 (487)
T KOG1217|consen  151 PFRCSCTEGYEGEPCETD--LDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCET---T---GNGGTCVDSVACSC  222 (487)
T ss_pred             ceeeeeCCCccccccccc--ccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcC---C---CCCceEecceeccC
Confidence            445999999999999862  379984 66799999999999999999999999985541   1   0111222210  00


Q ss_pred             ccCccCCCCC-------CC-CCCCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCCCC----cccCCCCCCC-CCCCC
Q psy9424          89 ISGLCQPTCR-------SN-TTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQM----QCRPACEGIL-CGRNA  155 (535)
Q Consensus        89 ~~~~c~~~C~-------~~-~~C~~~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~----~c~~~C~~~~-C~~~g  155 (535)
                      ..+.-...|.       .+ ..|.+..+.+                  .+.|.++|.+..    ..+++|+... |.+++
T Consensus       223 ~~g~~~~~c~~~~~~~~~~~~~c~~~~~~~------------------~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~  284 (487)
T KOG1217|consen  223 PPGARGPECEVSIVECASGDGTCVNTVGSY------------------TCRCPEGYTGDACVTCVDVDSCALIASCPNGG  284 (487)
T ss_pred             CCCCCCCCcccccccccCCCCcccccCCce------------------eeeCCCCccccccceeeeccccCCCCccCCCC
Confidence            0000000111       11 2222222222                  234455666654    2478898753 99999


Q ss_pred             eeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccC
Q psy9424         156 LCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCED  235 (535)
Q Consensus       156 ~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~  235 (535)
                      +|++..+.|.|.|++||.|..+                                         ..+.+..+|....    
T Consensus       285 ~C~~~~~~~~C~C~~g~~g~~~-----------------------------------------~~~~~~~~C~~~~----  319 (487)
T KOG1217|consen  285 TCVNVPGSYRCTCPPGFTGRLC-----------------------------------------TECVDVDECSPRN----  319 (487)
T ss_pred             eeecCCCcceeeCCCCCCCCCC-----------------------------------------ccccccccccccc----
Confidence            9999988899999999999983                                         1122223332100    


Q ss_pred             CCcccCCCCCCCCCCCCcc--ccCCCCeeeeCCCCCccCCCCCCeeC-CcCCCCCCCCCCeeec-CCCCeeeeCCCCCcc
Q psy9424         236 HRCKISCLANNPCGPNALC--SAEKHKQICYCQPGYTGDAYFGCHLI-DFCAAKPCGPGARCDN-SRGSYKCLCPLGLVG  311 (535)
Q Consensus       236 ~~c~~~c~~~~~C~~~~~C--~~~~g~~~C~C~~G~~G~~~~~C~~~-~~C~~~~C~~~~~C~~-~~g~~~C~C~~Gy~g  311 (535)
                              ...+|.+++.|  ......+.|.|.++|.|.   .|+.. ++|...++..++.|++ ..+.|.|.++.+|.+
T Consensus       320 --------~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~---~C~~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~  388 (487)
T KOG1217|consen  320 --------AGGPCANGGTCNTLGSFGGFRCACGPGFTGR---RCEDSNDECASSPCCPGGTCVNETPGSYRCACPAGFAG  388 (487)
T ss_pred             --------cCCcCCCCcccccCCCCCCCCcCCCCCCCCC---ccccCCccccCCccccCCEeccCCCCCeEecCCCcccc
Confidence                    13557777777  233456789999999999   67776 4898888999999999 689999999999997


Q ss_pred             C--CCCCCCCCCCCCCCCCCCCCCCEEecCCCCCcc
Q psy9424         312 D--PYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKC  345 (535)
Q Consensus       312 ~--~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C  345 (535)
                      .  .....+.++++|..      .+.|++..+++.|
T Consensus       389 ~~~~~~~~~~~~~~c~~------~~~c~~~~~~~~c  418 (487)
T KOG1217|consen  389 KANGDGVGCEDIDECSG------CGDCVNGPGGGAC  418 (487)
T ss_pred             CCccccccccccccccC------CcceeccCCCCcc
Confidence            4  33344555666642      4456666666554

>KOG1219|consensus

Probab=99.10  E-value=1.4e-10  Score=132.22  Aligned_cols=107  Identities=27%  Similarity=0.642  Sum_probs=85.5

Q ss_pred             CCCCCCCCccccCC-CCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCC
Q psy9424         245 NNPCGPNALCSAEK-HKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQ  323 (535)
Q Consensus       245 ~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~  323 (535)
                      .+||+++|+|...+ +.|.|.|++.|+|..|+  .++++|.++||..+++|+...++|.|.|+.||+|..|+..  .+++
T Consensus      3869 ~npCqhgG~C~~~~~ggy~CkCpsqysG~~CE--i~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~--Gi~e 3944 (4289)
T KOG1219|consen 3869 DNPCQHGGTCISQPKGGYKCKCPSQYSGNHCE--IDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEAR--GISE 3944 (4289)
T ss_pred             cCcccCCCEecCCCCCceEEeCcccccCcccc--cccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeecc--cccc
Confidence            58999999998876 67999999999999555  4689999999999999999999999999999999988731  2444


Q ss_pred             CCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCC
Q psy9424         324 CTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPE  402 (535)
Q Consensus       324 C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  402 (535)
                      |+.                                               ..|..+|+|++..|+|.|.|-+||.|..+
T Consensus      3945 Cs~-----------------------------------------------n~C~~gg~C~n~~gsf~CncT~g~~gr~c 3976 (4289)
T KOG1219|consen 3945 CSK-----------------------------------------------NVCGTGGQCINIPGSFHCNCTPGILGRTC 3976 (4289)
T ss_pred             ccc-----------------------------------------------ccccCCceeeccCCceEeccChhHhcccC
Confidence            432                                               34555666677777777777777776653

>KOG1219|consensus

Probab=99.09  E-value=1.6e-10  Score=131.84  Aligned_cols=110  Identities=29%  Similarity=0.712  Sum_probs=96.7

Q ss_pred             CCCCCCCCCCCCeeccCC-CCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q psy9424         144 PACEGILCGRNALCTASD-HHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECN  222 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~-~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~  222 (535)
                      +.|..+||+++|+|.... ++|.|.|++-|+|..||+.                                          
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~------------------------------------------ 3902 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEID------------------------------------------ 3902 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccccc------------------------------------------
Confidence            789999999999999876 6799999999999997632                                          


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee--CCcCCCCCCCCCCeeecCCCC
Q psy9424         223 SHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL--IDFCAAKPCGPGARCDNSRGS  300 (535)
Q Consensus       223 ~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~--~~~C~~~~C~~~~~C~~~~g~  300 (535)
                       ...|.                ++||..+++|+...+.|.|.|+.||+|.   +|+.  +++|..++|.++|.|++..|+
T Consensus      3903 -~epC~----------------snPC~~GgtCip~~n~f~CnC~~gyTG~---~Ce~~Gi~eCs~n~C~~gg~C~n~~gs 3962 (4289)
T KOG1219|consen 3903 -LEPCA----------------SNPCLTGGTCIPFYNGFLCNCPNGYTGK---RCEARGISECSKNVCGTGGQCINIPGS 3962 (4289)
T ss_pred             -ccccc----------------CCCCCCCCEEEecCCCeeEeCCCCccCc---eeecccccccccccccCCceeeccCCc
Confidence             22333                5899999999999999999999999999   5553  899999999999999999999


Q ss_pred             eeeeCCCCCccCCCC
Q psy9424         301 YKCLCPLGLVGDPYG  315 (535)
Q Consensus       301 ~~C~C~~Gy~g~~c~  315 (535)
                      |+|.|.+||.|..|.
T Consensus      3963 f~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3963 FHCNCTPGILGRTCC 3977 (4289)
T ss_pred             eEeccChhHhcccCc
Confidence            999999999988764

>KOG1225|consensus

Probab=98.98  E-value=3.4e-09  Score=111.00  Aligned_cols=105  Identities=25%  Similarity=0.522  Sum_probs=74.2

Q ss_pred             CccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCC--CCCCCCCCCCCCCCCCCccccC
Q psy9424          14 HLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQ--SGVGTSCTSSRDCIGEQQCISG   91 (535)
Q Consensus        14 ~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~--C~~~~~C~~~~~C~~~~~C~~~   91 (535)
                      .|+++.+|+|..|+..    .|+  +.|..++.|++.    +|+|++||+|.+|++  |+      .  .|.....+.++
T Consensus       235 ic~c~~~~~g~~c~~~----~C~--~~c~~~g~c~~G----~CIC~~Gf~G~dC~e~~Cp------~--~cs~~g~~~~g  296 (525)
T KOG1225|consen  235 ICECPEGYFGPLCSTI----YCP--GGCTGRGQCVEG----RCICPPGFTGDDCDELVCP------V--DCSGGGVCVDG  296 (525)
T ss_pred             eeecCCceeCCccccc----cCC--CCCcccceEeCC----eEeCCCCCcCCCCCcccCC------c--ccCCCceecCC
Confidence            6999999999999964    554  556666888865    799999999997662  21      0  01111111111


Q ss_pred             ccCCCCCCCCCCCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCC
Q psy9424          92 LCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPG  171 (535)
Q Consensus        92 ~c~~~C~~~~~C~~~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~G  171 (535)
                                                           .+.|.++|+|+.+.+..|. .+|..+|.|++    ..|.|.+|
T Consensus       297 -------------------------------------~CiC~~g~~G~dCs~~~cp-adC~g~G~Ci~----G~C~C~~G  334 (525)
T KOG1225|consen  297 -------------------------------------ECICNPGYSGKDCSIRRCP-ADCSGHGKCID----GECLCDEG  334 (525)
T ss_pred             -------------------------------------EeecCCCccccccccccCC-ccCCCCCcccC----CceEeCCC
Confidence                                                 1367788888887777776 68888999984    37999999


Q ss_pred             CCCCCCC
Q psy9424         172 YVGHPGP  178 (535)
Q Consensus       172 f~g~~c~  178 (535)
                      |+|..|+
T Consensus       335 y~G~~C~  341 (525)
T KOG1225|consen  335 YTGELCI  341 (525)
T ss_pred             CcCCccc
Confidence            9998853

>KOG1225|consensus

Probab=98.91  E-value=1.7e-08  Score=105.89  Aligned_cols=121  Identities=26%  Similarity=0.620  Sum_probs=86.4

Q ss_pred             CccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         130 EQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSH  209 (535)
Q Consensus       130 ~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~  209 (535)
                      +.|+++|+|.++.+-.|... |+.++.+++.    .|+|++||+|..|+                               
T Consensus       267 CIC~~Gf~G~dC~e~~Cp~~-cs~~g~~~~g----~CiC~~g~~G~dCs-------------------------------  310 (525)
T KOG1225|consen  267 CICPPGFTGDDCDELVCPVD-CSGGGVCVDG----ECICNPGYSGKDCS-------------------------------  310 (525)
T ss_pred             EeCCCCCcCCCCCcccCCcc-cCCCceecCC----EeecCCCccccccc-------------------------------
Confidence            47788999998888778755 8888888874    89999999999853                               


Q ss_pred             CCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCC
Q psy9424         210 SGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCG  289 (535)
Q Consensus       210 ~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~  289 (535)
                              ...|                       +..|.+++.|+..    +|.|.+||+|.   .|...      .|.
T Consensus       311 --------~~~c-----------------------padC~g~G~Ci~G----~C~C~~Gy~G~---~C~~~------~C~  346 (525)
T KOG1225|consen  311 --------IRRC-----------------------PADCSGHGKCIDG----ECLCDEGYTGE---LCIQR------ACS  346 (525)
T ss_pred             --------cccC-----------------------CccCCCCCcccCC----ceEeCCCCcCC---ccccc------ccC
Confidence                    1222                       3668889999833    59999999999   44432      388


Q ss_pred             CCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCC
Q psy9424         290 PGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTD  340 (535)
Q Consensus       290 ~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~  340 (535)
                      +++.|++.     |+|..||.|.. .    .-+.+.....|.....++...
T Consensus       347 ~~g~cv~g-----C~C~~Gw~G~d-~----~~~~~~~~~~cs~~~~~~~~~  387 (525)
T KOG1225|consen  347 GGGQCVNG-----CKCKKGWRGPD-V----ADPSLLLITECSPPSLCIAGV  387 (525)
T ss_pred             CCceeccC-----ceeccCccCCC-c----CCchhhcccccCCCceeeccc
Confidence            88888763     99999999987 1    222333233455555555443

>KOG4260|consensus

Probab=98.59  E-value=5.7e-08  Score=90.98  Aligned_cols=71  Identities=25%  Similarity=0.651  Sum_probs=55.5

Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC--CC-CCCCCeee
Q psy9424         219 VECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA--KP-CGPGARCD  295 (535)
Q Consensus       219 ~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~--~~-C~~~~~C~  295 (535)
                      ..|.++++|...              +.+|..+..|+|+.|+|.|...+||.+.       +++|..  .. -..+..|+
T Consensus       231 ~gCvDvnEC~~e--------------p~~c~~~qfCvNteGSf~C~dk~Gy~~g-------~d~C~~~~d~~~~kn~~c~  289 (350)
T KOG4260|consen  231 EGCVDVNECQNE--------------PAPCKAHQFCVNTEGSFKCEDKEGYKKG-------VDECQFCADVCASKNRPCM  289 (350)
T ss_pred             cccccHHHHhcC--------------CCCCChhheeecCCCceEecccccccCC-------hHHhhhhhhhcccCCCCcc
Confidence            347888888754              5889999999999999999999999863       344432  22 23456889


Q ss_pred             cCCCCeeeeCCCCCc
Q psy9424         296 NSRGSYKCLCPLGLV  310 (535)
Q Consensus       296 ~~~g~~~C~C~~Gy~  310 (535)
                      ++++.|+|.|..|+.
T Consensus       290 ni~~~~r~v~f~~~~  304 (350)
T KOG4260|consen  290 NIDGQYRCVCFSGLI  304 (350)
T ss_pred             cCCccEEEEecccce
Confidence            999999999999975

>KOG4260|consensus

Probab=98.39  E-value=4.4e-07  Score=85.12  Aligned_cols=137  Identities=28%  Similarity=0.669  Sum_probs=88.4

Q ss_pred             CCCCCCCccccC---CCCeeeeCCCCCccCCCCCCeeC------Cc----CCC--CCCCCCCeeecCCCCeee-eCCCCC
Q psy9424         246 NPCGPNALCSAE---KHKQICYCQPGYTGDAYFGCHLI------DF----CAA--KPCGPGARCDNSRGSYKC-LCPLGL  309 (535)
Q Consensus       246 ~~C~~~~~C~~~---~g~~~C~C~~G~~G~~~~~C~~~------~~----C~~--~~C~~~~~C~~~~g~~~C-~C~~Gy  309 (535)
                      .+|..++.|...   .|+-+|.|.+||+|+.+..|.+-      ++    |..  .+|.  +.|..... -.| +|+.||
T Consensus       150 r~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~--~~Csg~~~-k~C~kCkkGW  226 (350)
T KOG4260|consen  150 RPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCL--GVCSGESS-KGCSKCKKGW  226 (350)
T ss_pred             CCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhh--cccCCCCC-CChhhhcccc
Confidence            567777777532   35678999999999976555420      00    100  1222  24543322 234 799999


Q ss_pred             ccCCCCCCCCCCCCCCCC-CCCCCCCEEecCCCCCccCC--CCc-cCcccCCCCcccCCCcCCCCCCCCCCCCCceeeec
Q psy9424         310 VGDPYGAGCVSASQCTRD-DQCPPGAHCVKTDGVPKCKA--SCQ-SDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVL  385 (535)
Q Consensus       310 ~g~~c~~~C~~~~~C~~~-~~C~~~~~C~~~~g~~~C~~--~C~-~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~  385 (535)
                      ..+.  ..|+|+++|... .+|.....|+|+.|+|.|..  ++. .+++|+.        |.+.|.     ..+..|+++
T Consensus       227 ~lde--~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g~d~C~~--------~~d~~~-----~kn~~c~ni  291 (350)
T KOG4260|consen  227 KLDE--EGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKGVDECQF--------CADVCA-----SKNRPCMNI  291 (350)
T ss_pred             eecc--cccccHHHHhcCCCCCChhheeecCCCceEecccccccCChHHhhh--------hhhhcc-----cCCCCcccC
Confidence            9884  459999999876 68999999999999999852  121 1233321        011111     235678899


Q ss_pred             CCCeeeeCCCCCcCC
Q psy9424         386 THRKVCFCPRGFTGD  400 (535)
Q Consensus       386 ~g~~~C~C~~G~~g~  400 (535)
                      +++|+|+|..|+.-.
T Consensus       292 ~~~~r~v~f~~~~~~  306 (350)
T KOG4260|consen  292 DGQYRCVCFSGLIII  306 (350)
T ss_pred             CccEEEEecccceee
Confidence            999999999887644

>KOG0994|consensus

Probab=98.32  E-value=2.8e-05  Score=85.76  Aligned_cols=106  Identities=27%  Similarity=0.603  Sum_probs=65.7

Q ss_pred             eecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC-CCCCCCCcccCCCcccCCC
Q psy9424         165 TCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSH-ADCSGDKVCEDHRCKISCL  243 (535)
Q Consensus       165 ~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~-~~C~~~~~C~~~~c~~~c~  243 (535)
                      .|+|.+|-+|..|.                   -|+|||+|..       .|+.-.|..+ ++|...             
T Consensus       831 QC~C~~g~ygrqCn-------------------qCqpG~WgFP-------eCr~CqCNgHA~~Cd~~-------------  871 (1758)
T KOG0994|consen  831 QCQCRPGTYGRQCN-------------------QCQPGYWGFP-------ECRPCQCNGHADTCDPI-------------  871 (1758)
T ss_pred             ceeeccccchhhcc-------------------ccCCCccCCC-------cCccccccCcccccCcc-------------
Confidence            78898998888864                   4788888853       4665566544 344322             


Q ss_pred             CCCCCCCCCccccCCCCeee-eCCCCCccCCCCCCeeCCcCCCCCCCCCC--------eeecC--CCCeeeeCCCCCccC
Q psy9424         244 ANNPCGPNALCSAEKHKQIC-YCQPGYTGDAYFGCHLIDFCAAKPCGPGA--------RCDNS--RGSYKCLCPLGLVGD  312 (535)
Q Consensus       244 ~~~~C~~~~~C~~~~g~~~C-~C~~G~~G~~~~~C~~~~~C~~~~C~~~~--------~C~~~--~g~~~C~C~~Gy~g~  312 (535)
                       ...|.   .|.+....+.| +|..||.|++..  -.-..|.+-||..+-        .|...  .....|.|.+||+|.
T Consensus       872 -tGaCi---~CqD~T~G~~CdrCl~GyyGdP~l--g~g~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~  945 (1758)
T KOG0994|consen  872 -TGACI---DCQDSTTGHSCDRCLDGYYGDPRL--GSGIGCRPCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGS  945 (1758)
T ss_pred             -ccccc---cccccccccchhhhhccccCCccc--CCCCCCCCCCCCCCCccchhccccccccccccceeeecccCcccc
Confidence             12222   24455567788 899999998754  122345444443321        23222  234579999999999


Q ss_pred             CCC
Q psy9424         313 PYG  315 (535)
Q Consensus       313 ~c~  315 (535)
                      .|+
T Consensus       946 RCe  948 (1758)
T KOG0994|consen  946 RCE  948 (1758)
T ss_pred             chh
Confidence            877

>KOG0994|consensus

Probab=97.95  E-value=0.00018  Score=79.68  Aligned_cols=26  Identities=35%  Similarity=0.828  Sum_probs=18.5

Q ss_pred             eeeecCCCeeeeCCCCCcCCCCCCCCcc
Q psy9424         381 LCNVLTHRKVCFCPRGFTGDPETECVRI  408 (535)
Q Consensus       381 ~C~~~~g~~~C~C~~G~~g~~~~~C~~~  408 (535)
                      +|..-.|  +|+|.+||-|..+++|...
T Consensus      1078 qCN~ftG--QCqCkpGfGGR~C~qCqel 1103 (1758)
T KOG0994|consen 1078 QCNEFTG--QCQCKPGFGGRTCSQCQEL 1103 (1758)
T ss_pred             ccccccc--ceeccCCCCCcchhHHHHh
Confidence            3443344  8999999999988777643

>KOG1226|consensus

Probab=97.75  E-value=0.00025  Score=76.41  Aligned_cols=62  Identities=29%  Similarity=0.717  Sum_probs=45.3

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCCC---CCCCCCeeecCCCCeeeeCCCC-CccCCCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAAK---PCGPGARCDNSRGSYKCLCPLG-LVGDPYGA  316 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~G-y~g~~c~~  316 (535)
                      ..|..+|+|.=.    +|+|.+||+|..+. |. +.+.|.+.   .|...|+|.=.    +|+|... |+|..|++
T Consensus       555 ~lC~g~G~C~CG----~CvC~~GwtG~~C~-C~~std~C~~~~G~iCSGrG~C~Cg----~C~C~~~~~sG~~CE~  621 (783)
T KOG1226|consen  555 VLCGGHGRCECG----RCVCNPGWTGSACN-CPLSTDTCESSDGQICSGRGTCECG----RCKCTDPPYSGEFCEK  621 (783)
T ss_pred             cccCCCCeEeCC----cEEcCCCCccCCCC-CCCCCccccCCCCceeCCCceeeCC----ceEcCCCCcCcchhhc
Confidence            568888887543    49999999999774 54 35667542   37777777654    6888776 99998874

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.71  E-value=2e-05  Score=54.14  Aligned_cols=33  Identities=21%  Similarity=0.519  Sum_probs=30.6

Q ss_pred             CCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcC
Q psy9424          32 RNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVG   64 (535)
Q Consensus        32 ~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G   64 (535)
                      ||||.. .+.|..++.|+++.|+|+|+|++||..
T Consensus         2 idEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~   35 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTCVNTEGSYSCSCPPGYEL   35 (42)
T ss_dssp             SSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEE
T ss_pred             ccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEE
Confidence            899997 678999999999999999999999983

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.70  E-value=1.4e-05  Score=51.22  Aligned_cols=30  Identities=33%  Similarity=0.793  Sum_probs=27.0

Q ss_pred             CCCCCCCCCCeeeeCC-CCceeeCCCCCcCC
Q psy9424         454 CSPAPCGPNAQCSVAN-HRPLCSCPAGLMGL  483 (535)
Q Consensus       454 C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~  483 (535)
                      |.+++|.++|+|++.. ++|+|+|++||+|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            3467999999999998 99999999999996

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.57  E-value=9.6e-05  Score=49.57  Aligned_cols=35  Identities=29%  Similarity=0.748  Sum_probs=31.2

Q ss_pred             cCCCCC-CCCCCCCeeeeCCCCceeeCCCCCc-CCCC
Q psy9424         451 VDPCSP-APCGPNAQCSVANHRPLCSCPAGLM-GLPS  485 (535)
Q Consensus       451 ~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~-G~~c  485 (535)
                      +|+|.. .+|.++++|+++.++|.|.|++||+ |..|
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C   38 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNC   38 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcC
Confidence            678876 7899999999999999999999999 7765

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.56  E-value=3.7e-05  Score=52.76  Aligned_cols=31  Identities=35%  Similarity=0.862  Sum_probs=29.0

Q ss_pred             cCCCC--CCCCCCCCeeeeCCCCceeeCCCCCc
Q psy9424         451 VDPCS--PAPCGPNAQCSVANHRPLCSCPAGLM  481 (535)
Q Consensus       451 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~  481 (535)
                      ||||+  +++|..++.|+|+.|+|+|.|++||.
T Consensus         2 idEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             ccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            78998  56899999999999999999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.47  E-value=5e-05  Score=48.72  Aligned_cols=28  Identities=21%  Similarity=0.564  Sum_probs=25.9

Q ss_pred             CCCCCCCCeeeecC-CCceeeCCCCCcCC
Q psy9424          38 DEVCGRNAECAVVN-HTPRCTCVAGTVGD   65 (535)
Q Consensus        38 ~~~C~~~g~C~~~~-~~~~C~C~~Gf~G~   65 (535)
                      .++|.++|+|++.. ++|+|+|++||+|.
T Consensus         3 ~~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    3 SNPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CCcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            46899999999998 89999999999996

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG1226|consensus

Probab=97.39  E-value=0.0015  Score=70.52  Aligned_cols=60  Identities=25%  Similarity=0.616  Sum_probs=42.5

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCCcCCC---CCCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLIDFCAA---KPCGPGARCDNSRGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~  315 (535)
                      .+|+..|.|+=.    +|+|.+...    |..++ |.+ -.|..   ..|..+|+|.=.    +|+|.+||+|..|+
T Consensus       514 ~vCSgrG~C~CG----qC~C~~~~~~~i~G~fCE-CDn-fsC~r~~g~lC~g~G~C~CG----~CvC~~GwtG~~C~  580 (783)
T KOG1226|consen  514 PVCSGRGDCVCG----QCVCHKPDNGKIYGKFCE-CDN-FSCERHKGVLCGGHGRCECG----RCVCNPGWTGSACN  580 (783)
T ss_pred             CCcCCCCcEeCC----ceEecCCCCCceeeeeee-ccC-cccccccCcccCCCCeEeCC----cEEcCCCCccCCCC
Confidence            478888888644    488887766    66443 322 23433   348889998765    79999999999987

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.26  E-value=0.00037  Score=46.66  Aligned_cols=35  Identities=26%  Similarity=0.656  Sum_probs=30.4

Q ss_pred             cCCCCC-CCCCCCCeeccCCCCceecCCCCCC-CCCC
Q psy9424         143 RPACEG-ILCGRNALCTASDHHATCSCKPGYV-GHPG  177 (535)
Q Consensus       143 ~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~-g~~c  177 (535)
                      +++|.. .+|.++++|+++.++|.|.|++||+ |..|
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C   38 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNC   38 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcC
Confidence            567776 7899899999999999999999999 7664

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.19  E-value=0.0005  Score=45.51  Aligned_cols=35  Identities=31%  Similarity=0.767  Sum_probs=30.9

Q ss_pred             cCCCCC-CCCCCCCeeeeCCCCceeeCCCCCcCCCC
Q psy9424         451 VDPCSP-APCGPNAQCSVANHRPLCSCPAGLMGLPS  485 (535)
Q Consensus       451 ~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~c  485 (535)
                      +++|.. .+|.+++.|++..++|+|.|++||.|..|
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C   37 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNC   37 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcC
Confidence            577765 78999999999999999999999999765

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.02  E-value=0.00026  Score=46.55  Aligned_cols=29  Identities=31%  Similarity=0.736  Sum_probs=24.1

Q ss_pred             CCCCCCCceeeecCCCeeeeCCCCCcCCC
Q psy9424         373 QGACGVNSLCNVLTHRKVCFCPRGFTGDP  401 (535)
Q Consensus       373 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  401 (535)
                      .+.|+.+|+|+++.++|+|+|++||.|++
T Consensus         5 ~~~C~~nA~C~~~~~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    5 NGGCHPNATCTNTGGSYTCTCKPGYEGDG   33 (36)
T ss_dssp             GGGS-TTCEEEE-TTSEEEEE-CEEECCS
T ss_pred             CCCCCCCcEeecCCCCEEeECCCCCccCC
Confidence            46899999999999999999999999986

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1836|consensus

Probab=97.00  E-value=0.048  Score=65.70  Aligned_cols=49  Identities=24%  Similarity=0.558  Sum_probs=35.7

Q ss_pred             ccCCCCCCCCcc--cCCCCCCCCCCCCeeccCC--CCceec-CCCCCCCCCCCC
Q psy9424         131 QCRSNDMGQMQC--RPACEGILCGRNALCTASD--HHATCS-CKPGYVGHPGPS  179 (535)
Q Consensus       131 ~C~~~~~G~~~c--~~~C~~~~C~~~g~C~~~~--~~~~C~-C~~Gf~g~~c~~  179 (535)
                      .|.++|+|...-  ...|..-+|...+.|..+.  ....|. |++||+|..|+.
T Consensus       760 ~C~~GfYg~~~~~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~  813 (1705)
T KOG1836|consen  760 QCVDGFYGLPDLGTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEE  813 (1705)
T ss_pred             hhcCCCCCccccCCCCCCccCCCCCChhhcCcCcccceecCCCCCCCccccccc
Confidence            566777776422  1227777888888887765  457898 999999999864

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.97  E-value=0.0003  Score=46.26  Aligned_cols=29  Identities=34%  Similarity=0.657  Sum_probs=23.8

Q ss_pred             CCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424          38 DEVCGRNAECAVVNHTPRCTCVAGTVGDP   66 (535)
Q Consensus        38 ~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~   66 (535)
                      .+.|..+++|+++.++|.|+|++||+|+.
T Consensus         5 ~~~C~~nA~C~~~~~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    5 NGGCHPNATCTNTGGSYTCTCKPGYEGDG   33 (36)
T ss_dssp             GGGS-TTCEEEE-TTSEEEEE-CEEECCS
T ss_pred             CCCCCCCcEeecCCCCEEeECCCCCccCC
Confidence            46799999999999999999999999984

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.85  E-value=0.0014  Score=43.28  Aligned_cols=35  Identities=29%  Similarity=0.674  Sum_probs=30.1

Q ss_pred             cCCCCC-CCCCCCCeeccCCCCceecCCCCCCCCCC
Q psy9424         143 RPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPG  177 (535)
Q Consensus       143 ~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c  177 (535)
                      +++|.. .+|.++++|+++.+.|.|.|++||.|..|
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C   37 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNC   37 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcC
Confidence            466766 68988899999999999999999999764

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.75  E-value=0.0021  Score=41.75  Aligned_cols=30  Identities=27%  Similarity=0.664  Sum_probs=26.7

Q ss_pred             CCCCCCCCeeeeCCCCceeeCCCCCcCC-CC
Q psy9424         456 PAPCGPNAQCSVANHRPLCSCPAGLMGL-PS  485 (535)
Q Consensus       456 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~-~c  485 (535)
                      ..+|.+++.|++..+.|+|.|+.||.|. .|
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCcccCCc
Confidence            5678889999999999999999999998 44

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.69  E-value=0.0024  Score=41.64  Aligned_cols=28  Identities=32%  Similarity=0.756  Sum_probs=24.7

Q ss_pred             CCCCCCCeeeeCCCCceeeCCCCCcC-CCC
Q psy9424         457 APCGPNAQCSVANHRPLCSCPAGLMG-LPS  485 (535)
Q Consensus       457 ~~C~~~~~C~~~~g~~~C~C~~G~~G-~~c  485 (535)
                      .+|.++ +|++..++|+|.|++||.| ..|
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCccCCcc
Confidence            578888 9999999999999999999 544

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.61  E-value=0.0021  Score=37.92  Aligned_cols=24  Identities=38%  Similarity=0.836  Sum_probs=20.7

Q ss_pred             CeeeeCCCCCccCCCCCCCCCCCC
Q psy9424         300 SYKCLCPLGLVGDPYGAGCVSASQ  323 (535)
Q Consensus       300 ~~~C~C~~Gy~g~~c~~~C~~~~~  323 (535)
                      +|+|+|++||......++|++|+|
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            589999999998887888888875

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.34  E-value=0.005  Score=39.90  Aligned_cols=28  Identities=29%  Similarity=0.780  Sum_probs=25.4

Q ss_pred             CCCCCCCCeeccCCCCceecCCCCCCCC
Q psy9424         148 GILCGRNALCTASDHHATCSCKPGYVGH  175 (535)
Q Consensus       148 ~~~C~~~g~C~~~~~~~~C~C~~Gf~g~  175 (535)
                      ..+|.++++|+++.++|.|.|+.||.|.
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCccc
Confidence            4678889999999999999999999987

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.20  E-value=0.00096  Score=60.05  Aligned_cols=106  Identities=29%  Similarity=0.663  Sum_probs=66.0

Q ss_pred             CCCCCCCeeccCC-----CCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q psy9424         149 ILCGRNALCTASD-----HHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNS  223 (535)
Q Consensus       149 ~~C~~~g~C~~~~-----~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~  223 (535)
                      .+|+..++|++..     ..|.|.|.+||+...                                     ..|.+..|.+
T Consensus        50 K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~-------------------------------------~vCvp~~C~~   92 (197)
T PF06247_consen   50 KPCGDYAKCINQANKGEERAYKCDCINGYILKQ-------------------------------------GVCVPNKCNN   92 (197)
T ss_dssp             SEEETTEEEEE-SSTTSSTSEEEEE-TTEEESS-------------------------------------SSEEEGGGSS
T ss_pred             ccccchhhhhcCCCcccceeEEEecccCceeeC-------------------------------------CeEchhhcCc
Confidence            5677778887755     469999999999887                                     5677777764


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCCCCCCccccCC---CCeeeeCCCCCccCCCCCCee--CCcCCCCCCCCCCeeecCC
Q psy9424         224 HADCSGDKVCEDHRCKISCLANNPCGPNALCSAEK---HKQICYCQPGYTGDAYFGCHL--IDFCAAKPCGPGARCDNSR  298 (535)
Q Consensus       224 ~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~---g~~~C~C~~G~~G~~~~~C~~--~~~C~~~~C~~~~~C~~~~  298 (535)
                                            ..|. .|.|+..+   ....|+|.-|+.-+....|+.  ..+|. -.|..+-.|....
T Consensus        93 ----------------------~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~-LKCk~nE~CK~~~  148 (197)
T PF06247_consen   93 ----------------------KDCG-SGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCS-LKCKENEECKLVD  148 (197)
T ss_dssp             -------------------------T-TEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE---------TTTEEEEEET
T ss_pred             ----------------------eecC-CCeEEecCCCCCCceeEeeeceEeccCCcccCCCcccee-eecCCCcceeeeC
Confidence                                  3355 56886432   345899999998333334553  23443 3477778999999


Q ss_pred             CCeeeeCCCCCccCCCC
Q psy9424         299 GSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       299 g~~~C~C~~Gy~g~~c~  315 (535)
                      +-|+|.+..||.+..-+
T Consensus       149 ~~Y~C~~~~~~~~~~~~  165 (197)
T PF06247_consen  149 GYYKCVCKEGFPGDGEG  165 (197)
T ss_dssp             TEEEEEE-TT-EEETTT
T ss_pred             cEEEeecCCCCCCCCCc
Confidence            99999999999876544

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.20  E-value=0.0045  Score=36.52  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=18.7

Q ss_pred             CceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc
Q psy9424          53 TPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQ   87 (535)
Q Consensus        53 ~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~   87 (535)
                      +|+|.|++||+..           .+...|.||+|
T Consensus         1 sy~C~C~~Gy~l~-----------~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLS-----------PDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCC-----------CCCCccccCCC
Confidence            5899999999976           33467888765

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.12  E-value=0.00087  Score=60.31  Aligned_cols=146  Identities=29%  Similarity=0.653  Sum_probs=83.9

Q ss_pred             CCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcc
Q psy9424         154 NALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVC  233 (535)
Q Consensus       154 ~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C  233 (535)
                      +|..+...+.|.|.|.+||....                                         ..+|+...+|....  
T Consensus        10 NG~LiQMSNHfEC~Cnegfvl~~-----------------------------------------EntCE~kv~C~~~e--   46 (197)
T PF06247_consen   10 NGYLIQMSNHFECKCNEGFVLKN-----------------------------------------ENTCEEKVECDKLE--   46 (197)
T ss_dssp             TEEEEEESSEEEEEESTTEEEEE-----------------------------------------TTEEEE----SG-G--
T ss_pred             CCEEEEccCceEEEcCCCcEEcc-----------------------------------------ccccccceecCccc--
Confidence            57777777889999999998765                                         12233233332100  


Q ss_pred             cCCCcccCCCCCCCCCCCCccccCC-----CCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCC---CCeeeeC
Q psy9424         234 EDHRCKISCLANNPCGPNALCSAEK-----HKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSR---GSYKCLC  305 (535)
Q Consensus       234 ~~~~c~~~c~~~~~C~~~~~C~~~~-----g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~---g~~~C~C  305 (535)
                               ....+|...++|++..     ..|.|.|.+||+.... .|. .+.|....|. .|.|+..+   ....|+|
T Consensus        47 ---------~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~-vCv-p~~C~~~~Cg-~GKCI~d~~~~~~~~CSC  114 (197)
T PF06247_consen   47 ---------NVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQG-VCV-PNKCNNKDCG-SGKCILDPDNPNNPTCSC  114 (197)
T ss_dssp             ---------GTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSS-SEE-EGGGSS---T-TEEEEEEEGGGSEEEEEE
T ss_pred             ---------ccCccccchhhhhcCCCcccceeEEEecccCceeeCC-eEc-hhhcCceecC-CCeEEecCCCCCCceeEe
Confidence                     0136788899998765     4699999999997654 354 3566666677 56887433   3458999


Q ss_pred             CCCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeec
Q psy9424         306 PLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVL  385 (535)
Q Consensus       306 ~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~  385 (535)
                      .-|+..+. ..                  .|+. +|.-.|                         +  -.|..+-.|..+
T Consensus       115 ~IGkV~~d-n~------------------kCtk-~G~T~C-------------------------~--LKCk~nE~CK~~  147 (197)
T PF06247_consen  115 NIGKVPDD-NK------------------KCTK-TGETKC-------------------------S--LKCKENEECKLV  147 (197)
T ss_dssp             -TEEETTT-TT------------------ESEE-EE-----------------------------------TTTEEEEEE
T ss_pred             eeceEecc-CC------------------cccC-CCccce-------------------------e--eecCCCcceeee
Confidence            99998221 11                  1211 011111                         1  134456678889


Q ss_pred             CCCeeeeCCCCCcCCC
Q psy9424         386 THRKVCFCPRGFTGDP  401 (535)
Q Consensus       386 ~g~~~C~C~~G~~g~~  401 (535)
                      .+-|+|++.+||.++.
T Consensus       148 ~~~Y~C~~~~~~~~~~  163 (197)
T PF06247_consen  148 DGYYKCVCKEGFPGDG  163 (197)
T ss_dssp             TTEEEEEE-TT-EEET
T ss_pred             CcEEEeecCCCCCCCC
Confidence            9999999999998775

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.07  E-value=0.0079  Score=39.09  Aligned_cols=28  Identities=36%  Similarity=0.780  Sum_probs=24.2

Q ss_pred             CCCCCCCeeccCCCCceecCCCCCCC-CCC
Q psy9424         149 ILCGRNALCTASDHHATCSCKPGYVG-HPG  177 (535)
Q Consensus       149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g-~~c  177 (535)
                      .+|..+ +|+++.++|+|.|++||.| ..|
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCccCCcc
Confidence            578777 9999999999999999999 553

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.90  E-value=0.009  Score=38.14  Aligned_cols=26  Identities=27%  Similarity=0.756  Sum_probs=22.4

Q ss_pred             CCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424          39 EVCGRNAECAVVNHTPRCTCVAGTVGDP   66 (535)
Q Consensus        39 ~~C~~~g~C~~~~~~~~C~C~~Gf~G~~   66 (535)
                      ..|+++|+|+..  .++|+|.+||+|..
T Consensus         6 ~~C~~~G~C~~~--~g~C~C~~g~~G~~   31 (32)
T PF07974_consen    6 NICSGHGTCVSP--CGRCVCDSGYTGPD   31 (32)
T ss_pred             CccCCCCEEeCC--CCEEECCCCCcCCC
Confidence            469999999976  56899999999984

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.77  E-value=0.012  Score=37.62  Aligned_cols=27  Identities=22%  Similarity=0.564  Sum_probs=22.8

Q ss_pred             CCCCCCCeeeeCCCCceeeCCCCCcCCCC
Q psy9424         457 APCGPNAQCSVANHRPLCSCPAGLMGLPS  485 (535)
Q Consensus       457 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~c  485 (535)
                      ..|+++|+|+...+  +|+|.+||+|..|
T Consensus         6 ~~C~~~G~C~~~~g--~C~C~~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTCVSPCG--RCVCDSGYTGPDC   32 (32)
T ss_pred             CccCCCCEEeCCCC--EEECCCCCcCCCC
Confidence            46899999997644  9999999999875

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=94.08  E-value=0.02  Score=28.59  Aligned_cols=13  Identities=38%  Similarity=0.989  Sum_probs=10.4

Q ss_pred             eeeCCCCCcCCCC
Q psy9424         473 LCSCPAGLMGLPS  485 (535)
Q Consensus       473 ~C~C~~G~~G~~c  485 (535)
                      +|+|++||+|..|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            5899999999875

>smart00051 DSL delta serrate ligand

Probab=94.07  E-value=0.064  Score=40.18  Aligned_cols=45  Identities=13%  Similarity=0.229  Sum_probs=34.4

Q ss_pred             CccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424          14 HLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDP   66 (535)
Q Consensus        14 ~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~   66 (535)
                      .-.|.++|.|..|..     .|...+....+.+|..   .+.++|.+||+|..
T Consensus        18 rv~C~~~~yG~~C~~-----~C~~~~d~~~~~~Cd~---~G~~~C~~Gw~G~~   62 (63)
T smart00051       18 RVTCDENYYGEGCNK-----FCRPRDDFFGHYTCDE---NGNKGCLEGWMGPY   62 (63)
T ss_pred             EeeCCCCCcCCccCC-----EeCcCccccCCccCCc---CCCEecCCCCcCCC
Confidence            456889999999976     5654455677788854   35799999999984

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=92.20  E-value=0.083  Score=34.69  Aligned_cols=21  Identities=43%  Similarity=0.885  Sum_probs=10.1

Q ss_pred             eeecCCCCeeeeCCCCCccCC
Q psy9424         293 RCDNSRGSYKCLCPLGLVGDP  313 (535)
Q Consensus       293 ~C~~~~g~~~C~C~~Gy~g~~  313 (535)
                      +|++.+++|+|.|++||+...
T Consensus        11 ~C~~~~g~~~C~C~~Gy~L~~   31 (36)
T PF14670_consen   11 ICVNTPGSYRCSCPPGYKLAE   31 (36)
T ss_dssp             EEEEETTSEEEE-STTEEE-T
T ss_pred             CCccCCCceEeECCCCCEECc
Confidence            455555555555555555444

...

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=92.12  E-value=0.08  Score=34.77  Aligned_cols=25  Identities=24%  Similarity=0.497  Sum_probs=19.4

Q ss_pred             CCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          39 EVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        39 ~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +.|++  .|+++.++|+|.|++||+..
T Consensus         6 GgC~h--~C~~~~g~~~C~C~~Gy~L~   30 (36)
T PF14670_consen    6 GGCSH--ICVNTPGSYRCSCPPGYKLA   30 (36)
T ss_dssp             GGSSS--EEEEETTSEEEE-STTEEE-
T ss_pred             CCcCC--CCccCCCceEeECCCCCEEC
Confidence            34554  79999999999999999876

...

>KOG1836|consensus

Probab=90.78  E-value=0.46  Score=57.70  Aligned_cols=53  Identities=26%  Similarity=0.574  Sum_probs=38.8

Q ss_pred             ee-eCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCC--CCeeee-CCCCCccCCCCC
Q psy9424         262 IC-YCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSR--GSYKCL-CPLGLVGDPYGA  316 (535)
Q Consensus       262 ~C-~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~--g~~~C~-C~~Gy~g~~c~~  316 (535)
                      +| +|..||.|.+-.  -....|.+-+|.+++.|....  ....|+ |++||+|..|+.
T Consensus       757 ~C~~C~~GfYg~~~~--~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~  813 (1705)
T KOG1836|consen  757 QCAQCVDGFYGLPDL--GTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEE  813 (1705)
T ss_pred             chhhhcCCCCCcccc--CCCCCCccCCCCCChhhcCcCcccceecCCCCCCCccccccc
Confidence            56 899999987532  112338777888888776654  567898 999999998773

>smart00051 DSL delta serrate ligand

Probab=82.08  E-value=1.8  Score=32.43  Aligned_cols=43  Identities=19%  Similarity=0.305  Sum_probs=28.0

Q ss_pred             ccCCCCCCCCcccCCCCC-CCCCCCCeeccCCCCceecCCCCCCCCCC
Q psy9424         131 QCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPG  177 (535)
Q Consensus       131 ~C~~~~~G~~~c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c  177 (535)
                      .|.++|.|..+ ...|.. +....+.+|.. .  ..++|.+||+|+.|
T Consensus        20 ~C~~~~yG~~C-~~~C~~~~d~~~~~~Cd~-~--G~~~C~~Gw~G~~C   63 (63)
T smart00051       20 TCDENYYGEGC-NKFCRPRDDFFGHYTCDE-N--GNKGCLEGWMGPYC   63 (63)
T ss_pred             eCCCCCcCCcc-CCEeCcCccccCCccCCc-C--CCEecCCCCcCCCC
Confidence            56677777763 345543 33456777754 2  36889999999863

>PHA02887 EGF-like protein; Provisional

Probab=81.97  E-value=1.4  Score=36.79  Aligned_cols=36  Identities=25%  Similarity=0.516  Sum_probs=28.2

Q ss_pred             CCCCCC--CCCCCCCCeeeecC--CCceeeCCCCCcCCCCC
Q psy9424          32 RNPCEA--DEVCGRNAECAVVN--HTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        32 ~d~C~~--~~~C~~~g~C~~~~--~~~~C~C~~Gf~G~~c~   68 (535)
                      ..+|..  .+-|- ||+|.-..  ..+.|.|++||+|.+|.
T Consensus        83 f~pC~~eyk~YCi-HG~C~yI~dL~epsCrC~~GYtG~RCE  122 (126)
T PHA02887         83 FEKCKNDFNDFCI-NGECMNIIDLDEKFCICNKGYTGIRCD  122 (126)
T ss_pred             ccccChHhhCEee-CCEEEccccCCCceeECCCCcccCCCC
Confidence            667775  56788 57997754  46899999999999654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	535
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	3e-07
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-06
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	3e-04
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	1e-05
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	1e-05
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	2e-05
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	7e-05
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-04
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	1e-04
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-04
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-04
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-04
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	3e-04
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	5e-04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	5e-04

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 15/96 (15%), Positives = 23/96 (23%)

Query: 246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLC 305
             C  +     +     C  + G        C  +      PC      + S     C  
Sbjct: 47  GNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPG 106

Query: 306 PLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDG 341
             G   +P         +C        G  C+ T G
Sbjct: 107 GEGFRPNPITVILEDIDECQELPGLCQGGKCINTFG 142

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 26/124 (20%), Positives = 38/124 (30%), Gaps = 10/124 (8%)

Query: 280 IDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKT 339
           ++ C          C N+ GSY C CP     +P   GCV          C         
Sbjct: 3   VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSG----NCYLDIRPRGD 58

Query: 340 DGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTG 399
           +G   C  S +          C    C+        C +    N   ++ +C    GF  
Sbjct: 59  NGDTAC--SNEIGVGVSKASCC----CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRP 112

Query: 400 DPET 403
           +P T
Sbjct: 113 NPIT 116

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 238 CKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY-FGCHLIDFCAAKPCG-PGARCD 295
           C +      PC      +  ++K +C    G+  +        ID C   P    G +C 
Sbjct: 79  CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCI 138

Query: 296 NSRGSYKCLCPLGLVGDPYGAGC 318
           N+ GS++C CP G   +     C
Sbjct: 139 NTFGSFQCRCPTGYYLNEDTRVC 161

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 28/114 (24%), Positives = 37/114 (32%), Gaps = 2/114 (1%)

Query: 242 CLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSY 301
           CL NN  G + +C+  K    C C  G+   A   C  ID C   P      C N  G Y
Sbjct: 3   CLDNN-GGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGGY 60

Query: 302 KCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEEC 355
           KC C  G   DP+   C +                  T    +  +   +    
Sbjct: 61  KCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNV 114

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 23/81 (28%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 242 CLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFG--CHLIDFCAAKPCG-PGARCDNSR 298
           C  +        C        C C  GY         C  ID C   P    G  C N+ 
Sbjct: 6   CRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTE 65

Query: 299 GSYKCLCPLGLVGDPYGAGCV 319
           GSY+C CP G    P  + C+
Sbjct: 66  GSYRCECPPGHQLSPNISACI 86

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYKCL 304
           NPC     C        C C  GYTG     C + ++ C + PC   A C +  G ++C+
Sbjct: 13  NPCEHAGKCINTLGSFECQCLQGYTGPR---CEIDVNECVSNPCQNDATCLDQIGEFQCI 69

Query: 305 CPLGLVGD 312
           C  G  G 
Sbjct: 70  CMPGYEGV 77

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 25/115 (21%), Positives = 36/115 (31%), Gaps = 5/115 (4%)

Query: 210 SGGPVGCHRVECNS----HADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYC 265
           +  P     +E            G      +   +     +  G          +    C
Sbjct: 33  TLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDPIC 92

Query: 266 QPGYTGDAYFGCHLIDFCAAKPCG-PGARCDNSRGSYKCLCPLGLVGDPYGAGCV 319
             GY+      C  ID C   P       C N+RGS+KC CP G+  D  G  C+
Sbjct: 93  GKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 15/70 (21%), Positives = 19/70 (27%), Gaps = 1/70 (1%)

Query: 244 ANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKC 303
                  +  C        C C  GY       C   D C+         C N  G ++C
Sbjct: 9   KEPDVCKHGQCINTDGSYRCECPFGYILAG-NECVDTDECSVGNPCGNGTCKNVIGGFEC 67

Query: 304 LCPLGLVGDP 313
            C  G    P
Sbjct: 68  TCEEGFEPGP 77

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 42/249 (16%), Positives = 65/249 (26%), Gaps = 26/249 (10%)

Query: 244 ANNPCGPNALCS--AEKHKQICYCQPGYTGDAYFGCHLIDFCAA-----KPCGPGARCDN 296
            +NPC P A CS   +      +C  G+ G+    C  +D CA             RC N
Sbjct: 7   LSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTH-CEDLDECALVPDICFSTSKVPRCVN 65

Query: 297 SRGSYKCL-CPLGLVGDPYGAGCVSASQCTR------------DDQCPPGAHCVKTDGVP 343
           ++  + CL CP    G+      + A++  +               C   A C+      
Sbjct: 66  TQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFS 125

Query: 344 KCKASCQSDEEC-GLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPE 402
                C+      G G  C +    +           +             P     D +
Sbjct: 126 DPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFD 185

Query: 403 TECVRITCLSHADCYPGGGSL----CLANLCTRGCSADTDCPAALSCRSAECVDPCSPAP 458
            + +   C    D             L N        D       +C             
Sbjct: 186 KDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDN 245

Query: 459 CGPNAQCSV 467
            G    CSV
Sbjct: 246 NGEGDACSV 254

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 43.2 bits (101), Expect = 1e-04
 Identities = 24/129 (18%), Positives = 38/129 (29%), Gaps = 5/129 (3%)

Query: 241 SCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY-FGCHLIDFCAAKP-CGPGARCDNSR 298
           +C  NN  G    C   +    C C  GY        C  ++ CA +  C  G  C NS 
Sbjct: 5   NCNVNN-GGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG--CTNSE 61

Query: 299 GSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLG 358
           G+++C C  G    P    C +                       +      + E     
Sbjct: 62  GAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL 121

Query: 359 EKCLQGQCN 367
           +   + +  
Sbjct: 122 DFHHRRELV 130

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 43.2 bits (101), Expect = 1e-04
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 280 IDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKT 339
            + C     G   +C   RG+ +C C  G      G  C   ++C  +  C     C  +
Sbjct: 3   EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNS 60

Query: 340 DGVPKCK 346
           +G  +C 
Sbjct: 61  EGAFQCW 67

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 15/85 (17%), Positives = 23/85 (27%)

Query: 240 ISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRG 299
           +     + C  +  C        C C+ G+ G           C+    G    C    G
Sbjct: 14  LEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVG 73

Query: 300 SYKCLCPLGLVGDPYGAGCVSASQC 324
             +C C  G         C  A + 
Sbjct: 74  WRRCSCAPGYKLGDDLLQCHPAVKF 98

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 42.8 bits (100), Expect = 3e-04
 Identities = 54/358 (15%), Positives = 75/358 (20%), Gaps = 53/358 (14%)

Query: 69  QSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSA 128
            +GV        DC G Q  +    Q    +               +  +  T       
Sbjct: 365 SNGVTHRNQPRGDCDGVQINVPITFQVKVTATECI-----QEQSFVIRALGFTDIVTVQV 419

Query: 129 TEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHS 188
             QC      Q + R  C G                 C C  GY+G           +  
Sbjct: 420 LPQCECRCRDQSRDRSLCHGKGFLEC---------GICRCDTGYIGKNCEC-----QTQG 465

Query: 189 GHAGGKHGPGLSPGATSHSSHSGGPVG--CHRVECNSHADCSGDKVCEDHRCKISCLANN 246
             +    G       +   S  G  V   C     +        + CE            
Sbjct: 466 RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ 525

Query: 247 PCGPNALCSAEKHKQICYCQPGYTGDA---YFGCHLIDFCAAKPCGPGARCDNSRGSYKC 303
            CG          K  C C PG+ G A                 C    RC        C
Sbjct: 526 VCGGPGRGLCFCGK--CRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR----CNVC 579

Query: 304 LCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQ 363
            C  G               C     CP       +             + C     C  
Sbjct: 580 ECHSGYQLP----------LCQECPGCPSPCGKYISCAECLKFEKGPFGKNC--SAACPG 627

Query: 364 GQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGD--PETECVRITCLSHADCYPG 419
            Q +N   +   C                C   +T +     +   I      +C  G
Sbjct: 628 LQLSNNPVKGRTCKERDSEG---------CWVAYTLEQQDGMDRYLIYVDESRECVAG 676

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 14/99 (14%), Positives = 22/99 (22%), Gaps = 5/99 (5%)

Query: 239 KISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSR 298
                + +    +  C  E++  +C C  GYT                PCG        R
Sbjct: 80  TRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLA--DNGKACIPTGPYPCGKQTLERRKR 137

Query: 299 GSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCV 337
              +     G   D               D        +
Sbjct: 138 SVAQATSSSGEAPDSI---TWKPYDAADLDPTENPFDLL 173

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 20/101 (19%), Positives = 28/101 (27%), Gaps = 7/101 (6%)

Query: 281 DFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAH-CVKT 339
             C ++PC     C +S   Y C C  G      G+ C  A      ++     H C+  
Sbjct: 6   SPCISQPCLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNECHPERTDGCQHFCLPG 61

Query: 340 DGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNS 380
                C  SC      G   K         C    +     
Sbjct: 62  QESYTC--SCAQGYRLGEDHKQCVPHDQCACGVLTSEKRAP 100

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	535
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.77
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.74
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.74
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.72
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.7
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.67
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.66
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.62
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.59
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.58
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.56
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.55
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.55
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.53
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.52
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.52
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.48
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.48
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.47
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.39
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.39
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.33
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.19
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.17
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.16
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.13
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.08
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.04
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.04
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.01
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.99
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.96
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.95
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.93
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.93
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.92
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.92
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.91
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.91
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.89
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.82
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.81
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.78
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.76
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.73
2vh0_B	134	Activated factor XA light chain; serine protease,	98.72
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.7
2vh0_B	134	Activated factor XA light chain; serine protease,	98.68
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.63
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.62
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.59
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.49
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.46
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.41
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.38
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.3
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.29
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.19
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.17
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.16
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.15
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.14
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.02
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.99
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.96
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.9
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	97.84
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.81
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.78
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.76
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.75
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.71
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.61
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.57
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.49
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.49
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.42
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.33
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.3
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.2
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.11
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.08
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.96
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.89
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.81
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	96.74
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.58
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.56
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.55
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.52
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.46
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.24
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.08
1ob1_C	99	Major merozoite surface protein; immune system, im	96.06
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.93
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	95.92
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.85
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	95.77
1ob1_C	99	Major merozoite surface protein; immune system, im	95.74
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	95.49
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	95.37
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	95.36
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	95.32
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	95.24
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	95.16
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.14
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	94.8
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	94.65
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	94.64
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	94.47
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.25
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	93.82
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	93.78
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.66
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.22
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	93.19
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	93.17
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.08
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	92.89
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	92.71
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	92.02
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	91.97
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	91.88
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	91.74
1szb_A	170	Mannose binding lectin-associated serine protease-	91.48
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	91.33
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	91.1
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	91.08
1szb_A	170	Mannose binding lectin-associated serine protease-	90.59
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	90.49
2wph_E	59	Coagulation factor IXA light chain; serine proteas	90.31
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	90.16
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	88.89
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	87.34
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	86.78
2wph_E	59	Coagulation factor IXA light chain; serine proteas	85.58
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	84.8
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	84.23
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	82.91

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.77  E-value=4e-20  Score=171.54  Aligned_cols=151  Identities=21%  Similarity=0.466  Sum_probs=118.8

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCC----CCCCCCCCeeecCC-----CCeeeeCCCCCccCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCA----AKPCGPGARCDNSR-----GSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~----~~~C~~~~~C~~~~-----g~~~C~C~~Gy~g~~c~  315 (535)
                      +.+|.+ ++|+++.++|+|.|++||+|.....|+++++|.    ..+|.++++|++..     ++|+|+|++||+|..+.
T Consensus        10 ~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~   88 (186)
T 1z1y_A           10 DTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT   88 (186)
T ss_dssp             TCCCBT-EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE
T ss_pred             CCCCCC-CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC
Confidence            578985 599999999999999999987444688999998    67899999999998     89999999999997643


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceee----ecCCCeee
Q psy9424         316 AGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCN----VLTHRKVC  391 (535)
Q Consensus       316 ~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~----~~~g~~~C  391 (535)
                        |. +++|..                                               ..|.++++|+    ++.++|+|
T Consensus        89 --C~-~d~C~~-----------------------------------------------~~C~~~g~C~~~~~~~~g~~~C  118 (186)
T 1z1y_A           89 --CV-LDVCQY-----------------------------------------------XNCGESGECIVEYLSEIQSAGC  118 (186)
T ss_dssp             --EE-EGGGTT-----------------------------------------------CCCCTTEEEEEEEETTEEEEEE
T ss_pred             --CC-CCcCcC-----------------------------------------------CCCCCCCEEeeCCcCCCCCceE
Confidence              32 334421                                               1355566776    77789999


Q ss_pred             eCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCC-CCCCeeeeCCC
Q psy9424         392 FCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPC-GPNAQCSVANH  470 (535)
Q Consensus       392 ~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C-~~~~~C~~~~g  470 (535)
                      .|++||+|...                                      .+..|++.. +++|. .+| .++++|+++.+
T Consensus       119 ~C~~Gy~g~~~--------------------------------------~~~~C~~~~-~~~C~-~~C~~~~~~C~n~~g  158 (186)
T 1z1y_A          119 SCAIGXVPNPE--------------------------------------DEXXCTXTG-ETACQ-LXCNTDNEVCXNVEG  158 (186)
T ss_dssp             EECTEEEEETT--------------------------------------TTTEEEEEE-CCCCC-CCCCTTTEEEEEETT
T ss_pred             ECCCCCcccCC--------------------------------------CCCcceEcC-CCccc-ccccccCcceecCCC
Confidence            99999998531                                      123333300 37785 589 89999999999


Q ss_pred             CceeeCCCCCcCCCCC
Q psy9424         471 RPLCSCPAGLMGLPSA  486 (535)
Q Consensus       471 ~~~C~C~~G~~G~~c~  486 (535)
                      +|+|+|++||+|..+.
T Consensus       159 ~y~C~C~~G~~g~~~~  174 (186)
T 1z1y_A          159 VYXCQCMEGFTFDXEX  174 (186)
T ss_dssp             EEEEEECTTCEEETTT
T ss_pred             CeeeECCCCCccCccc
Confidence            9999999999999876

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.74  E-value=4.9e-18  Score=148.85  Aligned_cols=121  Identities=27%  Similarity=0.631  Sum_probs=100.4

Q ss_pred             ccCCCC--CCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424         142 CRPACE--GILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV  219 (535)
Q Consensus       142 c~~~C~--~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~  219 (535)
                      ++|+|+  .++|.++++|+++.++|+|+|++||+|..|+                                         
T Consensus         4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~-----------------------------------------   42 (135)
T 2vj3_A            4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE-----------------------------------------   42 (135)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC-----------------------------------------
T ss_pred             ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccc-----------------------------------------
Confidence            478997  5899999999999999999999999998843                                         


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCCCCCCCCCeeecCC
Q psy9424         220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAAKPCGPGARCDNSR  298 (535)
Q Consensus       220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~~~C~~~~~C~~~~  298 (535)
                        .++++|.                ..+|.++++|++..++|+|.|++||+|.   .|+ ++++|...+|.++++|++..
T Consensus        43 --~~~~~C~----------------~~~C~~~~~C~~~~g~~~C~C~~G~~G~---~C~~~~~~C~~~~C~~~g~C~~~~  101 (135)
T 2vj3_A           43 --IDVNECV----------------SNPCQNDATCLDQIGEFQCICMPGYEGV---HCEVNTDECASSPCLHNGRCLDKI  101 (135)
T ss_dssp             --EECCTTT----------------TCCCCSSCEEEECSSCEEEECCTTEESS---SSCEECCTTTTCCSTTTCEEEECS
T ss_pred             --ccCccCC----------------CCCCCCCCEEeCCCCCceeeCCCCCcCC---cceecCCcccCCCcCCCCEeECCC
Confidence              1234553                3678889999999999999999999999   564 68999999999999999999


Q ss_pred             CCeeeeCCCCCccCCCCCCCCCCCCCCCC
Q psy9424         299 GSYKCLCPLGLVGDPYGAGCVSASQCTRD  327 (535)
Q Consensus       299 g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~  327 (535)
                      ++|+|.|++||+|..++.   ++++|...
T Consensus       102 g~~~C~C~~G~~G~~C~~---~i~~C~~~  127 (135)
T 2vj3_A          102 NEFQCECPTGFTGHLCQV---DLHHILDA  127 (135)
T ss_dssp             SCEEEECCTTEESSSSCE---ECC-----
T ss_pred             CCeEEECCCCCcCCccCc---cCccccCC
Confidence            999999999999988653   67888653

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.74  E-value=2.3e-19  Score=166.40  Aligned_cols=154  Identities=27%  Similarity=0.598  Sum_probs=117.5

Q ss_pred             CCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCC
Q psy9424         147 EGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHAD  226 (535)
Q Consensus       147 ~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~  226 (535)
                      .++||. +++|+++.++|+|.|++||+|..                                         ...|+++++
T Consensus         9 ~~~pC~-ng~C~~~~g~~~C~C~~G~~g~~-----------------------------------------~~~C~~id~   46 (186)
T 1z1y_A            9 VDTICX-NGQLVQMSNHFXCMCNEGLVHLS-----------------------------------------ENTCEEXNE   46 (186)
T ss_dssp             TTCCCB-TEEEEECSSCEEEEECTTEEEEE-----------------------------------------TTEEEECCC
T ss_pred             CCCCCC-CCEeECCCCCeEeECCCCCccCC-----------------------------------------CCccCCCCc
Confidence            447888 56999999999999999999873                                         023555677


Q ss_pred             CCCCCcccCCCcccCCCCCCCCCCCCccccCC-----CCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeee----cC
Q psy9424         227 CSGDKVCEDHRCKISCLANNPCGPNALCSAEK-----HKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCD----NS  297 (535)
Q Consensus       227 C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~-----g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~----~~  297 (535)
                      |....            .+.+|.++++|+++.     ++|+|.|++||+|.... |+ +++|...+|.++++|+    +.
T Consensus        47 C~~~~------------~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~-C~-~d~C~~~~C~~~g~C~~~~~~~  112 (186)
T 1z1y_A           47 CXXET------------LGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT-CV-LDVCQYXNCGESGECIVEYLSE  112 (186)
T ss_dssp             CSGGG------------TTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE-EE-EGGGTTCCCCTTEEEEEEEETT
T ss_pred             ccCCC------------CCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC-CC-CCcCcCCCCCCCCEEeeCCcCC
Confidence            65210            026799899999998     89999999999998653 55 7999999999999999    88


Q ss_pred             CCCeeeeCCCCCccCCC-CCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCC
Q psy9424         298 RGSYKCLCPLGLVGDPY-GAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGAC  376 (535)
Q Consensus       298 ~g~~~C~C~~Gy~g~~c-~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C  376 (535)
                      .++|+|.|++||+|... .+.|+++                               +             .++|.  ..|
T Consensus       113 ~g~~~C~C~~Gy~g~~~~~~~C~~~-------------------------------~-------------~~~C~--~~C  146 (186)
T 1z1y_A          113 IQSAGCSCAIGXVPNPEDEXXCTXT-------------------------------G-------------ETACQ--LXC  146 (186)
T ss_dssp             EEEEEEEECTEEEEETTTTTEEEEE-------------------------------E-------------CCCCC--CCC
T ss_pred             CCCceEECCCCCcccCCCCCcceEc-------------------------------C-------------CCccc--ccc
Confidence            88999999999998431 1112221                               0             11222  156


Q ss_pred             -CCCceeeecCCCeeeeCCCCCcCCCC
Q psy9424         377 -GVNSLCNVLTHRKVCFCPRGFTGDPE  402 (535)
Q Consensus       377 -~~~~~C~~~~g~~~C~C~~G~~g~~~  402 (535)
                       .++++|+++.++|+|.|++||+|+.+
T Consensus       147 ~~~~~~C~n~~g~y~C~C~~G~~g~~~  173 (186)
T 1z1y_A          147 NTDNEVCXNVEGVYXCQCMEGFTFDXE  173 (186)
T ss_dssp             CTTTEEEEEETTEEEEEECTTCEEETT
T ss_pred             cccCcceecCCCCeeeECCCCCccCcc
Confidence             56789999999999999999999874

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.72  E-value=4.9e-22  Score=190.03  Aligned_cols=244  Identities=11%  Similarity=-0.006  Sum_probs=158.3

Q ss_pred             CccCCCC---CCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcccc
Q psy9424          14 HLQQVPG---LASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCIS   90 (535)
Q Consensus        14 ~c~c~~g---~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~   90 (535)
                      .+.+.||   |.|..+...  ++++.  .+|.++|+|++..++|+|.|++||+|..+.              .++++|..
T Consensus        14 s~~~~pgg~~~~g~~~~~n--~~~~~--~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce--------------~ni~ec~~   75 (267)
T 4fbr_A           14 QATWNPGGLWLIGARDKQN--VVALD--IKSDDGGKTLKGTMTYNGEGPIGFRGTLSS--------------ANNYTVEN   75 (267)
T ss_dssp             TSCCEEEEEEECCCCSSCC--EEEEE--EECSSTTSEEEEEEEETTSCCEEEEEEECS--------------TTEEEEEE
T ss_pred             cCCcCCCCceeeccccccc--cccCC--CCcCCCCeecCCCCCeEEeCCCCccccccc--------------cccccccc
Confidence            3667777   778888764  55554  589999999999999999999999999543              23334332


Q ss_pred             CccCCCCCCCCCCCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCC
Q psy9424          91 GLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKP  170 (535)
Q Consensus        91 ~~c~~~C~~~~~C~~~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~  170 (535)
                                     ...+.+.+|.++++|...      ..|..        +++|++.||.++++|++...+|+|.|++
T Consensus        76 ---------------~~~c~s~pC~nggtc~~G------~~c~~--------~~eC~s~pC~ngG~C~~~~~sy~C~C~~  126 (267)
T 4fbr_A           76 ---------------QWGGTSAPWQPGGVWVLG------ARDKQ--------NIVAVSIKSNDGGKTLTGTTTYNGEGPI  126 (267)
T ss_dssp             ---------------ESSSTTSCEEEEEEEECC------CCSSC--------CEEEEEEECSSTTSEEEEEEEETTSCCE
T ss_pred             ---------------ccCcCCCcccCCCeeecc------Ccccc--------ccccCCCCCCCCCEEecCCccEEeeCCC
Confidence                           233455666666665332      23332        4689889999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCC
Q psy9424         171 GYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGP  250 (535)
Q Consensus       171 Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~  250 (535)
                      ||+|..|++..                                .     .|++..-|.                +.+|.+
T Consensus       127 Gf~G~~Ce~~~--------------------------------d-----~C~n~~~c~----------------s~pC~n  153 (267)
T 4fbr_A          127 GFKSEVTDGDT--------------------------------Y-----SVENQWGGS----------------AAPWHS  153 (267)
T ss_dssp             EEEEEECCCCE--------------------------------E-----EEEEECSST----------------TSCCEE
T ss_pred             CccccCCCCCc--------------------------------c-----cccccCCcC----------------CccccC
Confidence            99999975210                                1     122111111                345554


Q ss_pred             CCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCC----
Q psy9424         251 NALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTR----  326 (535)
Q Consensus       251 ~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~----  326 (535)
                      .++|+              .|.   +|.....+.+.+|.++++|++...+|+|.|++||+|..++.   +++++..    
T Consensus       154 gg~c~--------------~G~---~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~---~i~ec~~~~~c  213 (267)
T 4fbr_A          154 GGVWV--------------LGT---RGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP---DTYTVENQWGG  213 (267)
T ss_dssp             EEEEE--------------CCS---STTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET---TEEEEEEECSC
T ss_pred             Cccee--------------ccc---ccccccccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc---ccceeccCCCc
Confidence            44443              244   23332345567788889998888889999999999887653   4444321    


Q ss_pred             -CCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCC
Q psy9424         327 -DDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGD  400 (535)
Q Consensus       327 -~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  400 (535)
                       ..+|++++.++.       .  |.+...   ...|           ...|.++++|++...+|.|.||+||+|.
T Consensus       214 ~~~~c~~gG~~~~-------~--C~~g~n---~~~c-----------~~~c~ngGtC~dg~~sy~CeCp~GF~G~  265 (267)
T 4fbr_A          214 STAPWNPGGFWMI-------G--ARNGQN---VVAL-----------NVASSDGGKTLAGTMIYNGEGPIGFRAR  265 (267)
T ss_dssp             TTSCCEEEEEEEC-------C--CCTTCC---EEEE-----------EEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred             cCCcccCCCeEEE-------e--cCCCCc---cccC-----------CcCCCCCCEeeCCCcceeecCCCCcccc
Confidence             133444433321       1  222211   0011           1256678899998899999999999985

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.70  E-value=3.4e-21  Score=184.28  Aligned_cols=213  Identities=10%  Similarity=0.035  Sum_probs=146.6

Q ss_pred             CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q psy9424         149 ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCS  228 (535)
Q Consensus       149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~  228 (535)
                      .+|.++|+|++..++|+|.|++||+|..|++..                                     ..|.+..-|.
T Consensus        38 ~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni-------------------------------------~ec~~~~~c~   80 (267)
T 4fbr_A           38 IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANN-------------------------------------YTVENQWGGT   80 (267)
T ss_dssp             EECSSTTSEEEEEEEETTSCCEEEEEEECSTTE-------------------------------------EEEEEESSST
T ss_pred             CCcCCCCeecCCCCCeEEeCCCCcccccccccc-------------------------------------cccccccCcC
Confidence            478899999999999999999999999975310                                     0111111121


Q ss_pred             CCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCC
Q psy9424         229 GDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLG  308 (535)
Q Consensus       229 ~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G  308 (535)
                                      +.||.++++|              |+|.   .|+..++|++.||.++++|++...+|+|.|++|
T Consensus        81 ----------------s~pC~nggtc--------------~~G~---~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~G  127 (267)
T 4fbr_A           81 ----------------SAPWQPGGVW--------------VLGA---RDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIG  127 (267)
T ss_dssp             ----------------TSCEEEEEEE--------------ECCC---CSSCCEEEEEEECSSTTSEEEEEEEETTSCCEE
T ss_pred             ----------------CCcccCCCee--------------eccC---ccccccccCCCCCCCCCEEecCCccEEeeCCCC
Confidence                            4666666554              3455   566777999999999999999999999999999


Q ss_pred             CccCCCCCCCCCCCCCC-----CCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceee
Q psy9424         309 LVGDPYGAGCVSASQCT-----RDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCN  383 (535)
Q Consensus       309 y~g~~c~~~C~~~~~C~-----~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~  383 (535)
                      |+|..++.   ++++|.     ...+|++.++|+....       |+...++      .          ...|.++++|+
T Consensus       128 f~G~~Ce~---~~d~C~n~~~c~s~pC~ngg~c~~G~~-------c~~~i~c------~----------~~~c~ngg~C~  181 (267)
T 4fbr_A          128 FKSEVTDG---DTYSVENQWGGSAAPWHSGGVWVLGTR-------GKQNVIN------V----------DAKSNDGGKTL  181 (267)
T ss_dssp             EEEEECCC---CEEEEEEECSSTTSCCEEEEEEECCSS-------TTSCEEE------E----------EEECSSTTSEE
T ss_pred             ccccCCCC---CcccccccCCcCCccccCCcceecccc-------ccccccc------C----------CCCCCCCCEee
Confidence            99998874   344532     1246777666654211       2211111      1          23577789999


Q ss_pred             ecCCCeeeeCCCCCcCCCC----CC------CCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCC
Q psy9424         384 VLTHRKVCFCPRGFTGDPE----TE------CVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDP  453 (535)
Q Consensus       384 ~~~g~~~C~C~~G~~g~~~----~~------C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~  453 (535)
                      +..++|+|.|++||+|..+    ++      +...+|.+++.+...         |..++          .      ++.
T Consensus       182 dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~---------C~~g~----------n------~~~  236 (267)
T 4fbr_A          182 SGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIG---------ARNGQ----------N------VVA  236 (267)
T ss_dssp             EEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECC---------CCTTC----------C------EEE
T ss_pred             CCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEe---------cCCCC----------c------ccc
Confidence            9999999999999999874    23      222344444433221         33332          1      222


Q ss_pred             CCCCCCCCCCeeeeCCCCceeeCCCCCcCC
Q psy9424         454 CSPAPCGPNAQCSVANHRPLCSCPAGLMGL  483 (535)
Q Consensus       454 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~  483 (535)
                      | ..+|.++|+|++...+|.|+||+||+|.
T Consensus       237 c-~~~c~ngGtC~dg~~sy~CeCp~GF~G~  265 (267)
T 4fbr_A          237 L-NVASSDGGKTLAGTMIYNGEGPIGFRAR  265 (267)
T ss_dssp             E-EEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred             C-CcCCCCCCEeeCCCcceeecCCCCcccc
Confidence            2 4579999999999999999999999985

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.67  E-value=1.5e-16  Score=140.90  Aligned_cols=123  Identities=24%  Similarity=0.595  Sum_probs=95.4

Q ss_pred             CCCCCCCCCCCCeeccCC--CCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424         144 PACEGILCGRNALCTASD--HHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC  221 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~--~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C  221 (535)
                      |+|..+||.++++|+++.  ++|+|+|++||+|..|+.....                               .-....|
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~-------------------------------~~~~~~c   49 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEV-------------------------------ASDEEEP   49 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCC-------------------------------TTTTTSC
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccc-------------------------------ccccccc
Confidence            468889999999999876  6899999999999997531100                               0001123


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccc-------cCCCCeeeeCCCCCccCCCCCCe-eCCcCCCCCCCCCCe
Q psy9424         222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCS-------AEKHKQICYCQPGYTGDAYFGCH-LIDFCAAKPCGPGAR  293 (535)
Q Consensus       222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~-------~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~~~C~~~~~  293 (535)
                      .++++|.                +.+|.++++|+       ++.++|+|.|++||+|.   .|+ ++++|...+|.++++
T Consensus        50 ~~~~~C~----------------~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~---~C~~~i~~C~~~~C~~~~~  110 (143)
T 4d90_A           50 TSAGPCT----------------PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI---HCQHNINECEVEPCKNGGI  110 (143)
T ss_dssp             CCCCTTS----------------SCCCCTTCEEEECCCEETTEECCEEEECCTTEEST---TSCEECCTTTTCCSCTTCE
T ss_pred             ccCCcCC----------------CCCCCCCCEecCCCccccCCCCCeEeECcCCCcCC---CcccCCCcCCCCCCCCCCE
Confidence            3444553                47799999998       66789999999999999   676 899999999999999


Q ss_pred             eecCCCCeeeeCCCCCccCCCCC
Q psy9424         294 CDNSRGSYKCLCPLGLVGDPYGA  316 (535)
Q Consensus       294 C~~~~g~~~C~C~~Gy~g~~c~~  316 (535)
                      |++..++|+|.|++||+|+.++.
T Consensus       111 C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A          111 CTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             EEEETTEEEEECCTTCBSTTSCB
T ss_pred             eECCCCCeEeECCCCCccCCcee
Confidence            99999999999999999998763

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.66  E-value=1.5e-16  Score=139.33  Aligned_cols=102  Identities=28%  Similarity=0.652  Sum_probs=91.2

Q ss_pred             CCCCCCCceeeecCCCeeeeCCCCCcCCCC----CCCCccCCCCCCcccCCCC-CccCCCCCCCCCcCCCCCCCCCCcCC
Q psy9424         373 QGACGVNSLCNVLTHRKVCFCPRGFTGDPE----TECVRITCLSHADCYPGGG-SLCLANLCTRGCSADTDCPAALSCRS  447 (535)
Q Consensus       373 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~----~~C~~~~C~~~~~C~~~~g-~~C~~g~C~~g~~~~~~C~~g~~C~~  447 (535)
                      ..+|.++++|+++.++|+|+|++||+|..+    ++|...+|.++++|++..+ |.|.   |++||       .|..|+.
T Consensus        12 ~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~---C~~G~-------~G~~C~~   81 (135)
T 2vj3_A           12 ANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCI---CMPGY-------EGVHCEV   81 (135)
T ss_dssp             SCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEE---CCTTE-------ESSSSCE
T ss_pred             CCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceee---CCCCC-------cCCccee
Confidence            357778899999999999999999999876    4788789999999998875 7898   99999       6788874


Q ss_pred             CCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         448 AECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       448 ~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      .  +++|...+|.++++|++..++|+|+|++||+|..|+
T Consensus        82 ~--~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~  118 (135)
T 2vj3_A           82 N--TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ  118 (135)
T ss_dssp             E--CCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             c--CCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccC
Confidence            4  899998999999999999999999999999999886

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.62  E-value=1.3e-16  Score=145.16  Aligned_cols=61  Identities=30%  Similarity=0.890  Sum_probs=50.6

Q ss_pred             CCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCC-CCCCCCCeeecC-CCCeeeeCCCCCccCCCC
Q psy9424         248 CGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAA-KPCGPGARCDNS-RGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       248 C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~-~~C~~~~~C~~~-~g~~~C~C~~Gy~g~~c~  315 (535)
                      |.+ ++|+   ++|+|+|++||+|.   .|+ ++++|.. .+|.++++|+++ +++|+|+|++||+|..++
T Consensus       105 C~~-g~C~---~~~~C~C~~G~~G~---~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce  168 (169)
T 2vj2_A          105 CVH-GICN---EPWQCLCETNWGGQ---LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE  168 (169)
T ss_dssp             CSS-EECS---STTCCEECTTEETT---TTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred             CCC-CCcC---CCCEEeCCCCCCCC---cccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence            554 4776   46789999999998   565 7888975 789999999986 789999999999998765

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.59  E-value=9.8e-16  Score=135.57  Aligned_cols=125  Identities=23%  Similarity=0.561  Sum_probs=97.8

Q ss_pred             CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q psy9424         149 ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCS  228 (535)
Q Consensus       149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~  228 (535)
                      ++|.++++|+++   |+|+|++||+|.. ++.                                  .-....|+++++|.
T Consensus         7 ~~C~~~~~C~~~---~~C~C~~G~~g~~-~~~----------------------------------~~~~~~C~dideC~   48 (143)
T 2bou_A            7 RWCPQDSSCVNA---TACRCNPGFSSFS-EII----------------------------------TTPMETCDDINECA   48 (143)
T ss_dssp             TTCCTTEEESSS---SCEEECTTEECSS-SSB----------------------------------CSTTCCCEECCGGG
T ss_pred             CcCCCCCEEcCC---CEEeCCCCCcCcc-ccc----------------------------------cCCCCcCCcccccc
Confidence            578889999985   8999999999864 000                                  00013466667775


Q ss_pred             CCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCC---------CCCeeCCcCCC--CCCCCCCeeecC
Q psy9424         229 GDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY---------FGCHLIDFCAA--KPCGPGARCDNS  297 (535)
Q Consensus       229 ~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~---------~~C~~~~~C~~--~~C~~~~~C~~~  297 (535)
                      ...             ..+|.++++|+++.++|+|.|++||+|...         ..|+++++|..  .+|.++++|+++
T Consensus        49 ~~~-------------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~  115 (143)
T 2bou_A           49 TLS-------------KVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT  115 (143)
T ss_dssp             C-----------------CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC
T ss_pred             CCC-------------CCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECC
Confidence            320             137998999999999999999999998743         26889999974  789999999999


Q ss_pred             CCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424         298 RGSYKCLCPLGLVGDPYGAGCVSASQC  324 (535)
Q Consensus       298 ~g~~~C~C~~Gy~g~~c~~~C~~~~~C  324 (535)
                      .++|+|.|++||+|....+.|+.+++|
T Consensus       116 ~g~y~C~C~~Gy~g~~~~~~C~~~~~C  142 (143)
T 2bou_A          116 VGSYSCRCRPGWKPRHGIPNNQKDTVC  142 (143)
T ss_dssp             SSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred             CCCEEeeCCCCcccCCCCccCccCCcc
Confidence            999999999999999988777776665

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.58  E-value=6.7e-15  Score=130.15  Aligned_cols=122  Identities=18%  Similarity=0.422  Sum_probs=89.1

Q ss_pred             CCCCCCCCCCCCCeeeecC--CCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCcc
Q psy9424          33 NPCEADEVCGRNAECAVVN--HTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCN  110 (535)
Q Consensus        33 d~C~~~~~C~~~g~C~~~~--~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~  110 (535)
                      |+|. .++|.++|+|+++.  ++|+|+|++||+|..+.               .+.++...                   
T Consensus         1 d~C~-~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~---------------~~~~~~~~-------------------   45 (143)
T 4d90_A            1 DICD-PNPCENGGICLPGLADGSFSCECPDGFTDPNCS---------------SVVEVASD-------------------   45 (143)
T ss_dssp             --CC-SCCCGGGCEEEC-----CCEEECCTTCCTTTTC---------------SCCCCTTT-------------------
T ss_pred             CcCC-CCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCc---------------cCcccccc-------------------
Confidence            4676 78999999999865  68999999999998433               11111000                   


Q ss_pred             CCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeec-------cCCCCceecCCCCCCCCCCCCCCCC
Q psy9424         111 SGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCT-------ASDHHATCSCKPGYVGHPGPSMGTG  183 (535)
Q Consensus       111 ~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~-------~~~~~~~C~C~~Gf~g~~c~~~~~~  183 (535)
                                        ...|.        .+++|..++|.++++|+       ++.++|+|+|++||+|..|+     
T Consensus        46 ------------------~~~c~--------~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~-----   94 (143)
T 4d90_A           46 ------------------EEEPT--------SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ-----   94 (143)
T ss_dssp             ------------------TTSCC--------CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC-----
T ss_pred             ------------------ccccc--------cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc-----
Confidence                              00111        25678888999999999       66789999999999998842     


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeee
Q psy9424         184 PSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQIC  263 (535)
Q Consensus       184 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C  263 (535)
                                                            .++++|.                ..+|.++++|+++.++|+|
T Consensus        95 --------------------------------------~~i~~C~----------------~~~C~~~~~C~~~~g~~~C  120 (143)
T 4d90_A           95 --------------------------------------HNINECE----------------VEPCKNGGICTDLVANYSC  120 (143)
T ss_dssp             --------------------------------------EECCTTT----------------TCCSCTTCEEEEETTEEEE
T ss_pred             --------------------------------------cCCCcCC----------------CCCCCCCCEeECCCCCeEe
Confidence                                                  1455664                3679999999999999999


Q ss_pred             eCCCCCccCCC
Q psy9424         264 YCQPGYTGDAY  274 (535)
Q Consensus       264 ~C~~G~~G~~~  274 (535)
                      .|++||+|+.+
T Consensus       121 ~C~~G~~G~~c  131 (143)
T 4d90_A          121 ECPGEFMGRNC  131 (143)
T ss_dssp             ECCTTCBSTTS
T ss_pred             ECCCCCccCCc
Confidence            99999999943

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.56  E-value=2.6e-15  Score=150.61  Aligned_cols=160  Identities=28%  Similarity=0.644  Sum_probs=67.0

Q ss_pred             CCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCccCC
Q psy9424          33 NPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSG  112 (535)
Q Consensus        33 d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~~~  112 (535)
                      ++|.  .+|.++|+|++   .++|.|++||+|..|+.                     ..|...|..++.          
T Consensus       149 ~~C~--~~C~~~G~C~~---~~~C~C~~G~~G~~C~~---------------------~~C~~~C~~~G~----------  192 (324)
T 2ygq_A          149 AECP--GGCRNGGFCNE---RRICECPDGFHGPHCEK---------------------ALCTPRCMNGGL----------  192 (324)
T ss_dssp             CCCS--SCCCSSCEECT---TSCEECCTTEESSSSCE---------------------ESSSSCCCTTCE----------
T ss_pred             CCCC--CCCCCCCEECC---CCeEECCCCCcCCCCCC---------------------CCCCCCCCCCCE----------
Confidence            3564  68999999986   47999999999985431                     011112222222          


Q ss_pred             CCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         113 LCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAG  192 (535)
Q Consensus       113 ~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~  192 (535)
                             |..    ...+.|.++|+|..+.++.|. .+|.++|+|++.   +.|.|++||+|..|++             
T Consensus       193 -------C~~----~~~C~C~~G~~G~~C~~~~C~-~~C~~~G~C~~~---~~C~C~~G~~G~~C~~-------------  244 (324)
T 2ygq_A          193 -------CVT----PGFCICPPGFYGVNCDKANCS-TTCFNGGTCFYP---GKCICPPGLEGEQCEI-------------  244 (324)
T ss_dssp             -------ECS----SCCEECCTTCBTTTTCBCCCS-SCCCSSCCBSCS---SCBCCCTTCCTTTTC--------------
T ss_pred             -------EcC----CCEEeCCCCccCCCcccCcCC-CCCCCCCeeCCC---CeeeCCCCccCCCCCc-------------
Confidence                   221    123478888999887777886 689999999874   7899999999998531             


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccC
Q psy9424         193 GKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGD  272 (535)
Q Consensus       193 ~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~  272 (535)
                                                      ++|                 ..+|.++++|+.   .++|.|.+||+|.
T Consensus       245 --------------------------------~~C-----------------~~~C~~~g~C~~---~~~C~C~~G~~G~  272 (324)
T 2ygq_A          245 --------------------------------SKC-----------------PQPCRNGGKCIG---KSKCKCSKGYQGD  272 (324)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------CcC-----------------CCcCCCCCEECC---CCEEECCCCCcCC
Confidence                                            122                 256778888974   4689999999999


Q ss_pred             CCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCC
Q psy9424         273 AYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGA  316 (535)
Q Consensus       273 ~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~  316 (535)
                         .|+ +++|. .+|.++++|++   .++|.|++||+|..|+.
T Consensus       273 ---~C~-~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~  308 (324)
T 2ygq_A          273 ---LCS-KPVCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNK  308 (324)
T ss_dssp             --------------------------------------------
T ss_pred             ---CCc-CCCCC-CCCCCCCEECC---CCEeECCCCCcCCCCCC
Confidence               555 46675 67989999986   47999999999998774

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.55  E-value=5.1e-15  Score=148.49  Aligned_cols=154  Identities=27%  Similarity=0.732  Sum_probs=66.6

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC  324 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C  324 (535)
                      +.+|.++|+|++   .++|.|.+||+|.   .|+. +.|. .+|.++++|+.   .+.|.|++||+|..|+.     +.|
T Consensus       152 ~~~C~~~G~C~~---~~~C~C~~G~~G~---~C~~-~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~-----~~C  215 (324)
T 2ygq_A          152 PGGCRNGGFCNE---RRICECPDGFHGP---HCEK-ALCT-PRCMNGGLCVT---PGFCICPPGFYGVNCDK-----ANC  215 (324)
T ss_dssp             SSCCCSSCEECT---TSCEECCTTEESS---SSCE-ESSS-SCCCTTCEECS---SCCEECCTTCBTTTTCB-----CCC
T ss_pred             CCCCCCCCEECC---CCeEECCCCCcCC---CCCC-CCCC-CCCCCCCEEcC---CCEEeCCCCccCCCccc-----CcC
Confidence            367999999975   3689999999999   5554 4574 47999999976   36899999999987652     223


Q ss_pred             CCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCCC-
Q psy9424         325 TRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPET-  403 (535)
Q Consensus       325 ~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~-  403 (535)
                      .  .+|.                                              ++++|++   .++|.|++||+|..++ 
T Consensus       216 ~--~~C~----------------------------------------------~~G~C~~---~~~C~C~~G~~G~~C~~  244 (324)
T 2ygq_A          216 S--TTCF----------------------------------------------NGGTCFY---PGKCICPPGLEGEQCEI  244 (324)
T ss_dssp             S--SCCC----------------------------------------------SSCCBSC---SSCBCCCTTCCTTTTC-
T ss_pred             C--CCCC----------------------------------------------CCCeeCC---CCeeeCCCCccCCCCCc
Confidence            2  1222                                              2334433   2589999999999864 


Q ss_pred             -CCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcC
Q psy9424         404 -ECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMG  482 (535)
Q Consensus       404 -~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G  482 (535)
                       +|. .+|.++|+|+..  +.|.   |.+||       .|..|+    +++|. .+|.++|+|++   .++|.|++||+|
T Consensus       245 ~~C~-~~C~~~g~C~~~--~~C~---C~~G~-------~G~~C~----~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G  303 (324)
T 2ygq_A          245 SKCP-QPCRNGGKCIGK--SKCK---CSKGY-------QGDLCS----KPVCE-PGCGAHGTCHE---PNKCQCQEGWHG  303 (324)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CcCC-CcCCCCCEECCC--CEEE---CCCCC-------cCCCCc----CCCCC-CCCCCCCEECC---CCEeECCCCCcC
Confidence             453 478999999853  5787   88888       677787    45563 68999999986   479999999999


Q ss_pred             CCCC
Q psy9424         483 LPSA  486 (535)
Q Consensus       483 ~~c~  486 (535)
                      ..|+
T Consensus       304 ~~C~  307 (324)
T 2ygq_A          304 RHCN  307 (324)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            9986

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.55  E-value=1.9e-15  Score=137.43  Aligned_cols=150  Identities=25%  Similarity=0.564  Sum_probs=107.3

Q ss_pred             CCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEEe
Q psy9424         259 HKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCV  337 (535)
Q Consensus       259 g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~  337 (535)
                      ..+.|.|.+||+|.   .|+.  +|.+ ..+..+++|..   ..+|+|++||+|..++.     ++|..  .|.      
T Consensus        15 ~~~~c~C~~g~~G~---~C~~--~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~-----~~C~~--~C~------   73 (169)
T 2vj2_A           15 GRSAVTCDDYYYGF---GCNK--FCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNR-----AICRQ--GCS------   73 (169)
T ss_dssp             ------CCTTEETT---TTCE--ECCCEEETTEEEEECS---SCCEEECTTEESTTSCE-----ECCCT--TCC------
T ss_pred             cCeeeeCCCcCcCC---Cccc--ccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCC-----CCCCC--CCC------
Confidence            45679999999999   4543  4654 25777788864   34799999999987651     22321  111      


Q ss_pred             cCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccC-CCCCCcc
Q psy9424         338 KTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRIT-CLSHADC  416 (535)
Q Consensus       338 ~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~-C~~~~~C  416 (535)
                                                            + .++.|++   .|+|+|++||+|..+++|...+ |.++ +|
T Consensus        74 --------------------------------------~-~~g~C~~---~~~C~C~~G~~G~~C~~C~~~~~C~~g-~C  110 (169)
T 2vj2_A           74 --------------------------------------P-KHGSCKL---PGDCRCQYGWQGLYCDKCIPHPGCVHG-IC  110 (169)
T ss_dssp             --------------------------------------T-TTEECSS---TTCCEECTTEESSSSCEECCCTTCSSE-EC
T ss_pred             --------------------------------------C-CCcccCC---CCeeECCCCCCCCCcccCCCCCCCCCC-Cc
Confidence                                                  0 1234433   4689999999999998887765 8754 88


Q ss_pred             cCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCC-CCCCCCCCeeeeC-CCCceeeCCCCCcCCCCC
Q psy9424         417 YPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCS-PAPCGPNAQCSVA-NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       417 ~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~-~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~c~  486 (535)
                      +.  .++|.   |.+||       .|..|+..  +++|. ..+|.++++|+++ +++|+|+|++||+|..|+
T Consensus       111 ~~--~~~C~---C~~G~-------~G~~C~~~--~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce  168 (169)
T 2vj2_A          111 NE--PWQCL---CETNW-------GGQLCDKD--LNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE  168 (169)
T ss_dssp             SS--TTCCE---ECTTE-------ETTTTCEE--SCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred             CC--CCEEe---CCCCC-------CCCcccCC--CCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence            83  46888   88888       67888833  88997 4899999999996 899999999999999875

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.53  E-value=2e-14  Score=154.28  Aligned_cols=132  Identities=23%  Similarity=0.497  Sum_probs=106.1

Q ss_pred             ccCCCCCCCCCCCCeeccCCC-Ccee-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424         142 CRPACEGILCGRNALCTASDH-HATC-SCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV  219 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~-~~~C-~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~  219 (535)
                      .|++|+.+||.++++|+++.+ +|+| .|++||+|..                                          .
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg------------------------------------------~   39 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG------------------------------------------T   39 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCS------------------------------------------S
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCC------------------------------------------C
Confidence            378998899999999999885 4999 9999999865                                          3


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCC---ccccCCCCeeee-CCCCCccCCCC------------CCeeCCcC
Q psy9424         220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNA---LCSAEKHKQICY-CQPGYTGDAYF------------GCHLIDFC  283 (535)
Q Consensus       220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~---~C~~~~g~~~C~-C~~G~~G~~~~------------~C~~~~~C  283 (535)
                      .|+++++|...              +..|.+++   +|+++.++|+|. |++||+|..++            .|+++++|
T Consensus        40 ~CeDiDEC~~~--------------p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC  105 (634)
T 1yo8_A           40 HCEDLDECALV--------------PDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPC  105 (634)
T ss_dssp             SCCBCCTTTTS--------------CCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTT
T ss_pred             CccccccccCC--------------CCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccc
Confidence            46667887632              34599988   999999999998 99999988542            48889999


Q ss_pred             CC--CCCCCCCeeecCC----CCeeeeCCCCCccCCCCCCCC---CCCCCCCC-CCCC
Q psy9424         284 AA--KPCGPGARCDNSR----GSYKCLCPLGLVGDPYGAGCV---SASQCTRD-DQCP  331 (535)
Q Consensus       284 ~~--~~C~~~~~C~~~~----g~~~C~C~~Gy~g~~c~~~C~---~~~~C~~~-~~C~  331 (535)
                      ..  .+|.++++|+++.    ++|+|.|++||+|..  +.|.   ++++|... ..|.
T Consensus       106 ~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG--~~Ce~d~DiDeC~~~~~~C~  161 (634)
T 1yo8_A          106 KDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDG--LICGEDSDLDGWPNLNLVCA  161 (634)
T ss_dssp             TTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESS--SSEEECTTSSSSCSSCCTTT
T ss_pred             cCCCcccccCccccccccccccceeeeccCCccccC--cccccccCcccccCCCCccc
Confidence            75  5899999999998    999999999999853  2353   68888643 4565

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.52  E-value=1e-14  Score=128.95  Aligned_cols=118  Identities=26%  Similarity=0.593  Sum_probs=91.3

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCC------CCCCeeCCcCCCC---CCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDA------YFGCHLIDFCAAK---PCGPGARCDNSRGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~------~~~C~~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~  315 (535)
                      +.+|.++++|+++   |+|.|++||+|..      ...|+++++|+..   +|.++++|+++.++|+|.|++||+|..+.
T Consensus         6 ~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~   82 (143)
T 2bou_A            6 ARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA   82 (143)
T ss_dssp             CTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred             cCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence            4789999999875   7999999999842      2379999999874   89999999999999999999999998755


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCC
Q psy9424         316 AGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPR  395 (535)
Q Consensus       316 ~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~  395 (535)
                      +.+..                  ..     ...|++++||..+              ...|.++++|+++.++|+|.|++
T Consensus        83 ~~~~~------------------~~-----~~~C~dideC~~~--------------~~~C~~~~~C~n~~g~y~C~C~~  125 (143)
T 2bou_A           83 KTFKN------------------ES-----ENTCQDVDECSSG--------------QHQCDSSTVCFNTVGSYSCRCRP  125 (143)
T ss_dssp             SCBSS------------------GG-----GCCEEECCHHHHT--------------CCCCCTTSEEEECSSCEEEECCS
T ss_pred             ccccc------------------CC-----CCCcCCccCccCc--------------CCCCCCCCEEECCCCCEEeeCCC
Confidence            31110                  00     0125566666532              34677789999999999999999


Q ss_pred             CCcCCCC
Q psy9424         396 GFTGDPE  402 (535)
Q Consensus       396 G~~g~~~  402 (535)
                      ||+|...
T Consensus       126 Gy~g~~~  132 (143)
T 2bou_A          126 GWKPRHG  132 (143)
T ss_dssp             SSCBCTT
T ss_pred             CcccCCC
Confidence            9999874

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.52  E-value=1.5e-15  Score=137.40  Aligned_cols=60  Identities=25%  Similarity=0.510  Sum_probs=48.7

Q ss_pred             CCCeeeeCCC--CCccCCC-CCCeeCCcCCC--CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424         258 KHKQICYCQP--GYTGDAY-FGCHLIDFCAA--KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC  318 (535)
Q Consensus       258 ~g~~~C~C~~--G~~G~~~-~~C~~~~~C~~--~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C  318 (535)
                      .++|+|.|++  ||+|... ..|++|++|+.  .+|.+ ++|+++.++|+|.|++||+|....++|
T Consensus        97 ~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d~~~C  161 (162)
T 1uzk_A           97 TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNEDTRVC  161 (162)
T ss_dssp             SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCCCCcc
Confidence            4678999988  9998642 25789999975  45975 699999999999999999998766544

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.48  E-value=8.2e-14  Score=149.63  Aligned_cols=122  Identities=30%  Similarity=0.676  Sum_probs=92.4

Q ss_pred             CCCCCCCCccccCCC-Ceee-eCCCCCccCCCCCCeeCCcCCCCC--CCCCC---eeecCCCCeeee-CCCCCccCCCCC
Q psy9424         245 NNPCGPNALCSAEKH-KQIC-YCQPGYTGDAYFGCHLIDFCAAKP--CGPGA---RCDNSRGSYKCL-CPLGLVGDPYGA  316 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g-~~~C-~C~~G~~G~~~~~C~~~~~C~~~~--C~~~~---~C~~~~g~~~C~-C~~Gy~g~~c~~  316 (535)
                      +.+|.++++|+++.+ +|+| .|++||+|... .|+++++|...+  |.+++   +|+++.++|+|. |++||+|..++.
T Consensus         8 ~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g   86 (634)
T 1yo8_A            8 SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVG   86 (634)
T ss_dssp             GCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEE
T ss_pred             CCCCCCCCEEecCCCCCeECCcCCCccCCCCC-CccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccc
Confidence            478999999999885 5999 99999998544 699999998877  99998   999999999999 999999987541


Q ss_pred             CCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecC----CCeeee
Q psy9424         317 GCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLT----HRKVCF  392 (535)
Q Consensus       317 ~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~----g~~~C~  392 (535)
                        ..+....     ..             ...|++++||...              .+.|.++++|+++.    ++|+|.
T Consensus        87 --~g~~~~~-----~d-------------g~~C~dideC~~~--------------~~pC~~~~~Cvnt~~~~~GsY~C~  132 (634)
T 1yo8_A           87 --VGLEAAK-----TE-------------KQVCEPENPCKDK--------------THNCHKHAECIYLGHFSDPMYKCE  132 (634)
T ss_dssp             --SSSHHHH-----SC-------------CCCEEECCTTTTT--------------CCCCCTTEEEEECCTTCSSSEEEE
T ss_pred             --ccccccc-----cC-------------CCcccccccccCC--------------CcccccCccccccccccccceeee
Confidence              0000000     00             0124445555432              35777889999998    999999


Q ss_pred             CCCCCcCCC
Q psy9424         393 CPRGFTGDP  401 (535)
Q Consensus       393 C~~G~~g~~  401 (535)
                      |++||+|..
T Consensus       133 C~~Gy~GdG  141 (634)
T 1yo8_A          133 CQTGYAGDG  141 (634)
T ss_dssp             ECTTEEESS
T ss_pred             ccCCccccC
Confidence            999999864

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.48  E-value=1.4e-15  Score=137.43  Aligned_cols=143  Identities=27%  Similarity=0.537  Sum_probs=93.8

Q ss_pred             ccCCCCC-CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424         142 CRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE  220 (535)
Q Consensus       142 c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~  220 (535)
                      +||+|+. ++|. +++|+++.++|+|+|++||++..                           .|             ..
T Consensus         2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~---------------------------~g-------------~~   40 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNP---------------------------TR-------------VG   40 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECT---------------------------TS-------------SB
T ss_pred             ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECC---------------------------CC-------------Cc
Confidence            4889984 8997 79999999999999999999643                           00             22


Q ss_pred             CCCCCC--CCCCCcccCCCcccCCCCCCCC--CCCCccccCCC----CeeeeCCCCCc-cCCCCCCeeCCcCCCCCCCCC
Q psy9424         221 CNSHAD--CSGDKVCEDHRCKISCLANNPC--GPNALCSAEKH----KQICYCQPGYT-GDAYFGCHLIDFCAAKPCGPG  291 (535)
Q Consensus       221 C~~~~~--C~~~~~C~~~~c~~~c~~~~~C--~~~~~C~~~~g----~~~C~C~~G~~-G~~~~~C~~~~~C~~~~C~~~  291 (535)
                      |+++++  |...              ..+|  ..+++|+++.+    +|+|.|++||. +.   .|+.        |.. 
T Consensus        41 C~d~~~~~C~~~--------------~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~---~C~~--------C~~-   94 (162)
T 1uzk_A           41 CVDTRSGNCYLD--------------IRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT---PCEM--------CPA-   94 (162)
T ss_dssp             EECCCCEEEEEE--------------C----------CEEEEEEEECHHHHHTTTCCEETT---TTEE--------CCC-
T ss_pred             ccCCCCCcccCC--------------CcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC---Cccc--------CCC-
Confidence            333333  3211              1223  34678988776    79999999998 44   3431        211 


Q ss_pred             CeeecCCCCeeeeCCC--CCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCC
Q psy9424         292 ARCDNSRGSYKCLCPL--GLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNP  369 (535)
Q Consensus       292 ~~C~~~~g~~~C~C~~--Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~  369 (535)
                          +..++|+|.|++  ||++......|++|++|.                               ..           
T Consensus        95 ----~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~-------------------------------~~-----------  128 (162)
T 1uzk_A           95 ----VNTSEYKILCPGGEGFRPNPITVILEDIDECQ-------------------------------EL-----------  128 (162)
T ss_dssp             ----TTSHHHHHHCTTCTTEEECTTTCCEEECCHHH-------------------------------HC-----------
T ss_pred             ----CCCCCceeECCCCCCcccCCCCCccCcccccc-------------------------------CC-----------
Confidence                245789999998  999875443344444443                               21           


Q ss_pred             CCCCCCCCCCceeeecCCCeeeeCCCCCcCCC
Q psy9424         370 CERQGACGVNSLCNVLTHRKVCFCPRGFTGDP  401 (535)
Q Consensus       370 C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  401 (535)
                         .+.|.+ ++|+++.++|+|.|++||+|..
T Consensus       129 ---~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~  156 (162)
T 1uzk_A          129 ---PGLCQG-GKCINTFGSFQCRCPTGYYLNE  156 (162)
T ss_dssp             ---GGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred             ---CCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence               234543 5899999999999999999975

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.47  E-value=1.3e-13  Score=150.27  Aligned_cols=180  Identities=20%  Similarity=0.442  Sum_probs=121.9

Q ss_pred             CCCCCCCCCCCeeccCCCCce---ecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424         145 ACEGILCGRNALCTASDHHAT---CSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC  221 (535)
Q Consensus       145 ~C~~~~C~~~g~C~~~~~~~~---C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C  221 (535)
                      +|...||.++++|.+..|.|.   |.|++||+|..|+....                    +.+             .  
T Consensus       436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~--------------------~~~-------------~--  480 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEE--------------------DYR-------------P--  480 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC---------------------------------------
T ss_pred             CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccC--------------------ccC-------------C--
Confidence            677788988899987777777   99999999999763210                    000             0  


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCC----CCCccCCCCCCeeCCcCCC---CCCCCCCee
Q psy9424         222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQ----PGYTGDAYFGCHLIDFCAA---KPCGPGARC  294 (535)
Q Consensus       222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~----~G~~G~~~~~C~~~~~C~~---~~C~~~~~C  294 (535)
                      ...++|...            ....+|.++|+|++    +.|.|.    +||+|..++  .++++|..   .+|.++|+|
T Consensus       481 ~~~~~C~~~------------~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce--~~~~~C~~~~~~~C~~~G~C  542 (690)
T 3fcs_B          481 SQQDECSPR------------EGQPVCSQRGECLC----GQCVCHSSDFGKITGKYCE--CDDFSCVRYKGEMCSGHGQC  542 (690)
T ss_dssp             --CCCCSSS------------SSSCGGGGSEEECS----SSEEECCCSSCCCBSTTSC--BCSSCCCBSSSSBGGGSEEE
T ss_pred             ccCCcCCCC------------CCCCCCCCCCEEEC----CeeEeecCCCCCeeCCCcC--cccCcCcCCCCCCCCCCCEe
Confidence            001223210            00256888999984    479999    999999443  25678875   479999999


Q ss_pred             ecCCCCeeeeCCCCCccCCCCCCCC-CCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCC
Q psy9424         295 DNSRGSYKCLCPLGLVGDPYGAGCV-SASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQ  373 (535)
Q Consensus       295 ~~~~g~~~C~C~~Gy~g~~c~~~C~-~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~  373 (535)
                      ..    ++|.|++||+|..|+  |. ++++|...                                            +.
T Consensus       543 ~~----g~C~C~~Gy~G~~Ce--C~~~~~~C~~~--------------------------------------------~g  572 (690)
T 3fcs_B          543 SC----GDCLCDSDWTGYYCN--CTTRTDTCMSS--------------------------------------------NG  572 (690)
T ss_dssp             ET----TEEEECTTEESSSSC--EECCCTTTBCT--------------------------------------------TS
T ss_pred             cC----CeeECcCCCcCCCCc--cCCCCCcccCC--------------------------------------------CC
Confidence            87    699999999999876  31 23333210                                            01


Q ss_pred             CCCCCCceeeecCCCeeeeC-CCCCcCCCCCCCCc--cCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCC
Q psy9424         374 GACGVNSLCNVLTHRKVCFC-PRGFTGDPETECVR--ITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSA  448 (535)
Q Consensus       374 ~~C~~~~~C~~~~g~~~C~C-~~G~~g~~~~~C~~--~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~  448 (535)
                      ..|.++++|++    .+|.| ++||+|..|+.|..  .+|.++++|+.          |..+|       +|..|...
T Consensus       573 ~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~----------C~~g~-------tG~~C~~~  629 (690)
T 3fcs_B          573 LLCSGRGKCEC----GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE----------CKKFD-------RGALHDEN  629 (690)
T ss_dssp             SBTSSSCEEET----TEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT----------TTTTC-------CSSSSSSS
T ss_pred             CCCCCCCEEeC----CEEECCCCCccCCCcCcCCCCCCCCCCCCCccc----------CCCCC-------ccCCCCcc
Confidence            24555667754    28999 99999999876533  57999998875          55555       66666643

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.39  E-value=6.4e-13  Score=144.78  Aligned_cols=165  Identities=22%  Similarity=0.562  Sum_probs=122.0

Q ss_pred             CCCCCCCCccccCCCCee---eeCCCCCccCCCCCCee-------CCcCCC----CCCCCCCeeecCCCCeeeeCC----
Q psy9424         245 NNPCGPNALCSAEKHKQI---CYCQPGYTGDAYFGCHL-------IDFCAA----KPCGPGARCDNSRGSYKCLCP----  306 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~---C~C~~G~~G~~~~~C~~-------~~~C~~----~~C~~~~~C~~~~g~~~C~C~----  306 (535)
                      ..+|.++++|.+..|+|.   |.|.+||+|..++ +..       .++|..    .+|.++|+|+.    +.|.|+    
T Consensus       439 ~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~  513 (690)
T 3fcs_B          439 AQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDF  513 (690)
T ss_dssp             TTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSS
T ss_pred             CCCCCCCCcccCCCCeEeCCceEeCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCC
Confidence            367888889987778887   9999999999553 211       156865    34999999984    589999    


Q ss_pred             CCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecC
Q psy9424         307 LGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLT  386 (535)
Q Consensus       307 ~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~  386 (535)
                      +||+|..|+.   ++++|...                                            ....|.++++|++  
T Consensus       514 ~Gy~G~~Ce~---~~~~C~~~--------------------------------------------~~~~C~~~G~C~~--  544 (690)
T 3fcs_B          514 GKITGKYCEC---DDFSCVRY--------------------------------------------KGEMCSGHGQCSC--  544 (690)
T ss_dssp             CCCBSTTSCB---CSSCCCBS--------------------------------------------SSSBGGGSEEEET--
T ss_pred             CCeeCCCcCc---ccCcCcCC--------------------------------------------CCCCCCCCCEecC--
Confidence            9999998762   23333210                                            0124555677765  


Q ss_pred             CCeeeeCCCCCcCCCCC------CCCc---cCCCCCCcccCCCCCccCCCCC-CCCCcCCCCCCCCCCcCCCCCcCCCCC
Q psy9424         387 HRKVCFCPRGFTGDPET------ECVR---ITCLSHADCYPGGGSLCLANLC-TRGCSADTDCPAALSCRSAECVDPCSP  456 (535)
Q Consensus       387 g~~~C~C~~G~~g~~~~------~C~~---~~C~~~~~C~~~~g~~C~~g~C-~~g~~~~~~C~~g~~C~~~~c~d~C~~  456 (535)
                        ++|.|++||+|..|+      .|..   .+|.++|+|+.+   .|.   | .+||       .|..|+.   -..| +
T Consensus       545 --g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g---~C~---C~~~Gy-------~G~~Ce~---C~~C-~  605 (690)
T 3fcs_B          545 --GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG---SCV---CIQPGS-------YGDTCEK---CPTC-P  605 (690)
T ss_dssp             --TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT---EEE---CCSTTC-------BSTTSCB---CTTS-C
T ss_pred             --CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC---EEE---CCCCCc-------cCCCcCc---CCCC-C
Confidence              699999999999875      5654   479999999764   787   8 7888       6888875   2445 6


Q ss_pred             CCCCCCCeeeeCCCCceeeCCCCCcCCCCCCCcc
Q psy9424         457 APCGPNAQCSVANHRPLCSCPAGLMGLPSANTAC  490 (535)
Q Consensus       457 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~C  490 (535)
                      .+|.++++|++        |..||+|..|....|
T Consensus       606 ~~C~~~g~Cv~--------C~~g~tG~~C~~~~C  631 (690)
T 3fcs_B          606 DACTFKKECVE--------CKKFDRGALHDENTC  631 (690)
T ss_dssp             CTTTSCCGGGT--------TTTTCCSSSSSSSCS
T ss_pred             CCCCCCCCccc--------CCCCCccCCCCcccc
Confidence            88999999985        999999998765555

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.39  E-value=4.3e-14  Score=120.49  Aligned_cols=109  Identities=26%  Similarity=0.563  Sum_probs=84.4

Q ss_pred             ccCCCCCCCCCCCCeeccC-CCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424         142 CRPACEGILCGRNALCTAS-DHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE  220 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~-~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~  220 (535)
                      +||+|+.+||.+  +|+++ .++|+|+|++||+|...+                                       ...
T Consensus         3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~---------------------------------------~~~   41 (118)
T 1dx5_I            3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHE---------------------------------------PHR   41 (118)
T ss_dssp             CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTE---------------------------------------EEE
T ss_pred             ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCC---------------------------------------CCc
Confidence            488998899973  99999 899999999999988621                                       112


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCC
Q psy9424         221 CNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRG  299 (535)
Q Consensus       221 C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g  299 (535)
                      |.+  .|.                ..+|.  ++|++ .++|+|.|++||++.....|+++++|+. ++|  +++|+++.+
T Consensus        42 C~~--~C~----------------~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~g   98 (118)
T 1dx5_I           42 CQM--FCN----------------QTACP--ADCDP-NTQASCECPEGYILDDGFICTDIDECENGGFC--SGVCHNLPG   98 (118)
T ss_dssp             EEE--CCC----------------SSEEE--CEECT-TSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECSS
T ss_pred             ccc--ccC----------------CCCCC--CcccC-CCCeEeECCCCccCCCCCccccccccCCCCCC--cCeEEeCCC
Confidence            221  121                24454  57887 5889999999999432227889999987 889  689999999


Q ss_pred             CeeeeCCCCCccCCC
Q psy9424         300 SYKCLCPLGLVGDPY  314 (535)
Q Consensus       300 ~~~C~C~~Gy~g~~c  314 (535)
                      +|+|.|++||+|...
T Consensus        99 ~y~C~C~~G~~g~~~  113 (118)
T 1dx5_I           99 TFECICGPDSALAGQ  113 (118)
T ss_dssp             SEEEEECSSSSCEEE
T ss_pred             CEEEECCCCCccCCC
Confidence            999999999998653

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.33  E-value=5e-14  Score=125.10  Aligned_cols=127  Identities=31%  Similarity=0.592  Sum_probs=82.7

Q ss_pred             ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424         142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC  221 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C  221 (535)
                      +||+|+.+||. +++|+++.++|+|+|++||+|..+.                                        ..|
T Consensus         3 dideC~~~pC~-ng~C~n~~g~y~C~C~~G~~g~~~~----------------------------------------~~C   41 (147)
T 2w86_A            3 DIDECESSPCI-NGVCKNSPGSFICECSSESTLDPTK----------------------------------------TIC   41 (147)
T ss_dssp             CCCGGGGCCSB-TSEEEEETTEEEEECCTTEEECTTS----------------------------------------SBE
T ss_pred             cCccCcCCCCC-CCEeECCCCCEEeECCCCcccCCCC----------------------------------------Cee
Confidence            48899989997 5799999999999999999988632                                        111


Q ss_pred             CCCC--CCCCCCcccCCCcccCCCCCCCCCCCCccccCCC----------CeeeeCCCCCc---cCCCCCCeeCCcCCCC
Q psy9424         222 NSHA--DCSGDKVCEDHRCKISCLANNPCGPNALCSAEKH----------KQICYCQPGYT---GDAYFGCHLIDFCAAK  286 (535)
Q Consensus       222 ~~~~--~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g----------~~~C~C~~G~~---G~~~~~C~~~~~C~~~  286 (535)
                      .+..  .|...  -.+..|.+.   ...|...+.|.+..+          .|.|.|++||+   |.   .|++|++|+..
T Consensus        42 ~~~~~~~C~~~--~~g~~C~~~---~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~---~C~dideC~~~  113 (147)
T 2w86_A           42 IETIKGTCWQT--VIDGRCEIN---INGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGT---QCEDIDECEVF  113 (147)
T ss_dssp             EECCCEEEEEE--EETTEEEEE---EEEEECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETT---EEEECCHHHHS
T ss_pred             cCCCCCcccCC--CCCCccccC---CCccccCCccccCcCcccCCCcccCCCcccCCCccccCCCC---ccCccccccCC
Confidence            1110  00000  000011000   011111122322222          26789999996   55   78899999754


Q ss_pred             --CCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424         287 --PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC  318 (535)
Q Consensus       287 --~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C  318 (535)
                        +|.+ ++|+++.++|+|.|++||+|....++|
T Consensus       114 ~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~~~~~C  146 (147)
T 2w86_A          114 PGVCKN-GLCVNTRGSFKCQCPSGMTLDATGRIC  146 (147)
T ss_dssp             TTCSSS-SEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred             CCCCCC-CEEECCCCCEEeeCCCCCccCCCCCee
Confidence              4985 599999999999999999998766544

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.19  E-value=5e-13  Score=118.63  Aligned_cols=42  Identities=36%  Similarity=0.676  Sum_probs=35.7

Q ss_pred             eeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         278 HLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       278 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      ++|++|+++||.+ ++|++++++|+|.|++||+|..+.+.|++
T Consensus         2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~   43 (147)
T 2w86_A            2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIE   43 (147)
T ss_dssp             CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEE
T ss_pred             CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecC
Confidence            3689999999985 69999999999999999999877655554

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.17  E-value=3e-11  Score=125.31  Aligned_cols=163  Identities=21%  Similarity=0.463  Sum_probs=103.9

Q ss_pred             CccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCcc
Q psy9424          14 HLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLC   93 (535)
Q Consensus        14 ~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c   93 (535)
                      .|+|.+||.|..|+.     .|.   +|.++|+|++  ++|+|+|++||+|..|+.                 .|..+  
T Consensus       186 ~c~C~~g~~G~~C~~-----~C~---~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~-----------------~C~~g--  236 (423)
T 2gy5_A          186 VRRCEAQKWGPECNH-----LCT---ACMNNGVCHE--DTGECICPPGFMGRTCEK-----------------ACELH--  236 (423)
T ss_dssp             ECSSCTTEESTTSCE-----ECC---CCCTTCEECT--TTCCEECCTTEESTTSCE-----------------ECCTT--
T ss_pred             CCcCCCCCCCCCCCC-----CCC---CCCCCCEEEC--CCCcEeCCCCccCCCccc-----------------ccCCC--
Confidence            488999999999985     463   7999999987  468999999999995531                 01110  


Q ss_pred             CCCCCCCCCCCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCC-CCCCCCCeeccCCCCceecCCCCC
Q psy9424          94 QPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGY  172 (535)
Q Consensus        94 ~~~C~~~~~C~~~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf  172 (535)
                                                                |+|.. |.++|.. .+|.+++.|.  .+.|.|.|++||
T Consensus       237 ------------------------------------------~~g~~-C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~  271 (423)
T 2gy5_A          237 ------------------------------------------TFGRT-CKERCSGQEGCKSYVFCL--PDPYGCSCATGW  271 (423)
T ss_dssp             ------------------------------------------EESTT-SCEECCSTTTTTTCCEEE--TTTTEEECCBTC
T ss_pred             ------------------------------------------CCCCC-cCccCCCCCCCCCCCEEC--CCCCeEEeCCCc
Confidence                                                      11110 1123332 4577788885  457899999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCC
Q psy9424         173 VGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNA  252 (535)
Q Consensus       173 ~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~  252 (535)
                      +|..|+.                  .|.++|+|.        .     |..                     .-+|.+++
T Consensus       272 ~G~~C~~------------------~C~~G~~G~--------~-----C~~---------------------~C~C~ngg  299 (423)
T 2gy5_A          272 KGLQCNE------------------ACHPGFYGP--------D-----CKL---------------------RCSCNNGE  299 (423)
T ss_dssp             BSGGGCB------------------CCCTTBCSB--------T-----TCC---------------------BCCCTTCC
T ss_pred             ccccccC------------------ccCCCCcCC--------c-----ccc---------------------cccCCCCC
Confidence            9999752                  366777761        1     211                     12577888


Q ss_pred             ccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424         253 LCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       253 ~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~  315 (535)
                      +|.+..   .|.|++||+|.   .|+....-...+     ....  ..-.+.|.+||.|..++
T Consensus       300 ~C~~~~---~C~C~~G~~G~---~Ce~~~~~~~~~-----~~~~--~~~~~~c~~g~~g~~C~  349 (423)
T 2gy5_A          300 MCDRFQ---GCLCSPGWQGL---QCEREGIPRMTP-----KIVD--LPDHIEVNSGKFNPICK  349 (423)
T ss_dssp             EEETTT---EEECCTTCBST---TSCBCSSCCCCC-----EECS--CCSBCCEESEEECCEEE
T ss_pred             EecCCC---ceECCCCCcCC---CCccCccCCcCc-----ceec--CCCeEEeCCCccCCccc
Confidence            998764   39999999999   454321111111     1111  12247888899886543

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.16  E-value=7.3e-12  Score=106.56  Aligned_cols=96  Identities=26%  Similarity=0.603  Sum_probs=76.8

Q ss_pred             CCCCCCceeeec-CCCeeeeCCCCCcCCCC--CCCCccCCCCC---CcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCC
Q psy9424         374 GACGVNSLCNVL-THRKVCFCPRGFTGDPE--TECVRITCLSH---ADCYPGGGSLCLANLCTRGCSADTDCPAALSCRS  447 (535)
Q Consensus       374 ~~C~~~~~C~~~-~g~~~C~C~~G~~g~~~--~~C~~~~C~~~---~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~  447 (535)
                      .+|.+  +|+++ .++|+|.|++||+|...  ++|.. +|.++   ++|++..+|.|.   |++||...    .|..|++
T Consensus        10 ~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~-~C~~~~C~~~C~~~~~y~C~---C~~Gy~~~----~g~~C~d   79 (118)
T 1dx5_I           10 ANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM-FCNQTACPADCDPNTQASCE---CPEGYILD----DGFICTD   79 (118)
T ss_dssp             CCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEE-CCCSSEEECEECTTSTTCEE---CCTTEEEE----TTTEEEE
T ss_pred             CCCCC--CCCCCCCCCEEeECCCCccccCCCCCcccc-ccCCCCCCCcccCCCCeEeE---CCCCccCC----CCCcccc
Confidence            35652  89999 89999999999999853  34543 24333   788886568998   99999543    2788987


Q ss_pred             CCCcCCCCC-CCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         448 AECVDPCSP-APCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       448 ~~c~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                         ||+|+. ++|  +++|+++.++|+|+|++||+|..
T Consensus        80 ---ideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~  112 (118)
T 1dx5_I           80 ---IDECENGGFC--SGVCHNLPGTFECICGPDSALAG  112 (118)
T ss_dssp             ---CCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred             ---ccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence               999985 899  78999999999999999999865

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.13  E-value=6.6e-11  Score=93.63  Aligned_cols=64  Identities=31%  Similarity=0.794  Sum_probs=56.7

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCc--cCCCCCCeeCCcCC-CCCCCCCCeeecCCCCeeeeCCCCCccCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYT--GDAYFGCHLIDFCA-AKPCGPGARCDNSRGSYKCLCPLGLVGDPY  314 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~--G~~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c  314 (535)
                      .+|.+ ++|+++.++|+|.|++||+  |.   .|+++++|. .++|.+ ++|+++.++|+|.|++||+|...
T Consensus        12 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~---~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~~   78 (82)
T 1emn_A           12 DVCKH-GQCINTDGSYRCECPFGYILAGN---ECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGPM   78 (82)
T ss_dssp             TSCSS-SEECCCSSCCCEECCTTEEEETT---EEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCSS
T ss_pred             CCcCC-CEEEecCCCEEEECCCCeECCCC---ccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCCC
Confidence            67874 8999999999999999998  55   689999997 678976 69999999999999999998764

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.08  E-value=9.8e-11  Score=94.55  Aligned_cols=57  Identities=25%  Similarity=0.746  Sum_probs=49.9

Q ss_pred             cccCCCCeeeeCCCCCccCCCCCCe--eCCcCCCCCCCCCCeeecCC--CCeeeeCCCCCccCCCC
Q psy9424         254 CSAEKHKQICYCQPGYTGDAYFGCH--LIDFCAAKPCGPGARCDNSR--GSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       254 C~~~~g~~~C~C~~G~~G~~~~~C~--~~~~C~~~~C~~~~~C~~~~--g~~~C~C~~Gy~g~~c~  315 (535)
                      |++..++|+|.|++||+     .|+  ++++|.++||.++++|++..  ++|+|.|++||+|..|+
T Consensus        25 C~n~~~~y~C~C~~G~~-----~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   85 (91)
T 1tpg_A           25 VLRSNRVEYCWCNSGRA-----QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   85 (91)
T ss_dssp             CSSSSCEEEEECSSSCC-----BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             cccCCCCcEeECCCCCc-----ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCC
Confidence            44557889999999997     465  68999999999999999887  89999999999998876

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.04  E-value=1.3e-10  Score=92.95  Aligned_cols=72  Identities=35%  Similarity=0.791  Sum_probs=58.4

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCC--CCCCeeCCcCCCCC--CCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDA--YFGCHLIDFCAAKP--CGPGARCDNSRGSYKCLCPLGLVGDPYGAGC  318 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~--~~~C~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C  318 (535)
                      +.+|.+ ++|+++.++|+|.|++||++..  ...|++|++|+..+  |. +++|+++.++|+|.|++||++....++|
T Consensus        10 ~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~~~~~C   85 (86)
T 1lmj_A           10 PDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSPNISAC   85 (86)
T ss_dssp             SSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence            356864 5999999999999999998431  22799999998766  65 5799999999999999999987655433

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.04  E-value=8.4e-10  Score=114.41  Aligned_cols=137  Identities=25%  Similarity=0.633  Sum_probs=92.7

Q ss_pred             CeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEEecC
Q psy9424         260 KQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKT  339 (535)
Q Consensus       260 ~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~  339 (535)
                      .+.|.|.+||.|+   .|+.  .|  .+|.++++|.+  +.++|.|++||+|..|+..|..   ..              
T Consensus       184 ~~~c~C~~g~~G~---~C~~--~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~---g~--------------  237 (423)
T 2gy5_A          184 LIVRRCEAQKWGP---ECNH--LC--TACMNNGVCHE--DTGECICPPGFMGRTCEKACEL---HT--------------  237 (423)
T ss_dssp             EEECSSCTTEEST---TSCE--EC--CCCCTTCEECT--TTCCEECCTTEESTTSCEECCT---TE--------------
T ss_pred             ccCCcCCCCCCCC---CCCC--CC--CCCCCCCEEEC--CCCcEeCCCCccCCCcccccCC---CC--------------
Confidence            4568999999998   5553  45  38999999987  4679999999999987632211   00              


Q ss_pred             CCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccCCCCCCcccCC
Q psy9424         340 DGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPG  419 (535)
Q Consensus       340 ~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~  419 (535)
                                       .+..     |.++|...+.|.++++|.  .++|+|.|++||+|..++.               
T Consensus       238 -----------------~g~~-----C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~---------------  278 (423)
T 2gy5_A          238 -----------------FGRT-----CKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNE---------------  278 (423)
T ss_dssp             -----------------ESTT-----SCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCB---------------
T ss_pred             -----------------CCCC-----cCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccC---------------
Confidence                             0000     112233345677777885  5678999999999987432               


Q ss_pred             CCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCCC
Q psy9424         420 GGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSAN  487 (535)
Q Consensus       420 ~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~  487 (535)
                         .     |.+||       .|..|+.        ..+|.++++|.+..   .|.|++||+|..|+.
T Consensus       279 ---~-----C~~G~-------~G~~C~~--------~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~  320 (423)
T 2gy5_A          279 ---A-----CHPGF-------YGPDCKL--------RCSCNNGEMCDRFQ---GCLCSPGWQGLQCER  320 (423)
T ss_dssp             ---C-----CCTTB-------CSBTTCC--------BCCCTTCCEEETTT---EEECCTTCBSTTSCB
T ss_pred             ---c-----cCCCC-------cCCcccc--------cccCCCCCEecCCC---ceECCCCCcCCCCcc
Confidence               0     55555       4555543        22688888898664   399999999988873

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.01  E-value=1.7e-10  Score=93.10  Aligned_cols=80  Identities=24%  Similarity=0.442  Sum_probs=63.4

Q ss_pred             CeeeeCCCCCcCCCC--CCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcC-CCCCcCCCCCCCCCCCCe
Q psy9424         388 RKVCFCPRGFTGDPE--TECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCR-SAECVDPCSPAPCGPNAQ  464 (535)
Q Consensus       388 ~~~C~C~~G~~g~~~--~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~-~~~c~d~C~~~~C~~~~~  464 (535)
                      +|+|.|++||+|..+  ++|...||.++     ..++.|.   |++||       .  .|+ ..  +++|.++||.++|+
T Consensus         1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~-----~~~y~C~---C~~G~-------~--~C~~~~--~~~C~~~pC~ngg~   61 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQQHQSWLRPVLRS-----NRVEYCW---CNSGR-------A--QCHSVP--VKSCSEPRCFNGGT   61 (91)
T ss_dssp             CCCCCCBCSSSCCBCCSSCEEEEECSSS-----SCEEEEE---CSSSC-------C--BCCEEC--EEECSSCCSCTTCE
T ss_pred             CeeeECCCCCcCCeECCCcccCCccccC-----CCCcEeE---CCCCC-------c--ccccCc--CCcccCCCCCCCCE
Confidence            589999999999865  34544455543     1247888   88888       3  675 22  89999999999999


Q ss_pred             eeeCC--CCceeeCCCCCcCCCCC
Q psy9424         465 CSVAN--HRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       465 C~~~~--g~~~C~C~~G~~G~~c~  486 (535)
                      |++..  ++|+|.|++||+|..|+
T Consensus        62 C~~~~~~~~~~C~C~~G~~G~~Ce   85 (91)
T 1tpg_A           62 CQQALYFSDFVCQCPEGFAGKSCE   85 (91)
T ss_dssp             EEEESSSSCEEEECCTTCBSSSCC
T ss_pred             eecCCCCCCeEeECCCCCcCCcCC
Confidence            99987  89999999999999886

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.99  E-value=2.8e-10  Score=123.74  Aligned_cols=161  Identities=25%  Similarity=0.555  Sum_probs=98.4

Q ss_pred             CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCccCCCCCCC
Q psy9424          38 DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLE  117 (535)
Q Consensus        38 ~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~~~~C~~g  117 (535)
                      ..+|.++|+|+    .+.|.|++||+|..|+ |.....         ........    |.      ...  ...+|..+
T Consensus       434 s~~Cs~~G~C~----~g~C~C~~Gy~G~~Ce-c~~~~~---------~~~~~~~~----C~------~~~--~~~~Cs~~  487 (687)
T 3k6s_B          434 RSLCHGKGFLE----CGICRCDTGYIGKNCE-CQTQGR---------SSQELEGS----CR------KDN--NSIICSGL  487 (687)
T ss_dssp             SSTGGGSEEES----SSSEEECSSEESTTSC-EESSSC---------CCSGGGST----TS------SST--TSCGGGSS
T ss_pred             CCCCCCCCEEe----CCEeEcCCCCcCCccc-ccCCcC---------CccccCCC----CC------CCC--CCCcCCCC
Confidence            56898899998    3589999999999654 111000         00000001    11      000  00122223


Q ss_pred             CccccCCCCCCCCccC------CCCCCCCcc--cCCCCC---CCCCC--CCeeccCCCCceecCCCCCCCCCCCCCCCCC
Q psy9424         118 MQCTTHDQCSATEQCR------SNDMGQMQC--RPACEG---ILCGR--NALCTASDHHATCSCKPGYVGHPGPSMGTGP  184 (535)
Q Consensus       118 ~~C~~~~~c~~~~~C~------~~~~G~~~c--~~~C~~---~~C~~--~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~  184 (535)
                      .+|..     ..+.|.      ++|+|..+.  ++.|..   .+|.+  +|+|+.    ..|.|++||+|..|+...   
T Consensus       488 G~C~~-----G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~G~~Cec~~---  555 (687)
T 3k6s_B          488 GDCVC-----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQCER---  555 (687)
T ss_dssp             EEEET-----TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCCSTTSCSCC---
T ss_pred             CEEeC-----CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCcCCCCccCC---
Confidence            33331     134677      889999865  678863   46988  899986    389999999999975110   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeee
Q psy9424         185 SSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICY  264 (535)
Q Consensus       185 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~  264 (535)
                                                            +.+.|...             ...+|.++|+|+.    .+|.
T Consensus       556 --------------------------------------~~~~C~~~-------------~g~~Cs~~G~C~~----g~C~  580 (687)
T 3k6s_B          556 --------------------------------------TTEGCLNP-------------RRVECSGRGRCRC----NVCE  580 (687)
T ss_dssp             --------------------------------------SSCTTBCT-------------TCSBTSSSCCBCS----SCBC
T ss_pred             --------------------------------------CCCCCCCC-------------CCCCCCCCCcCCC----CEEE
Confidence                                                  11222210             0246888889976    3699


Q ss_pred             CCCCCccCCCCCCeeCCcCCCCCCCCCCeee
Q psy9424         265 CQPGYTGDAYFGCHLIDFCAAKPCGPGARCD  295 (535)
Q Consensus       265 C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~  295 (535)
                      |.+||+|..   |+.-..| +.+|.+++.|+
T Consensus       581 C~~Gy~G~~---Ce~c~~C-~~~C~~~g~Cv  607 (687)
T 3k6s_B          581 CHSGYQLPL---CQECPGC-PSPCGKYISCA  607 (687)
T ss_dssp             CSTTCCTTT---TCCCTTS-CCCCTTTHHHH
T ss_pred             CCCCCcCCC---CCCCCCC-CcccCCCCCCC
Confidence            999999994   5433456 46898888887

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.96  E-value=4.4e-10  Score=88.84  Aligned_cols=73  Identities=27%  Similarity=0.645  Sum_probs=58.7

Q ss_pred             ccCCCCC-CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424         142 CRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE  220 (535)
Q Consensus       142 c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~  220 (535)
                      ++|+|+. ++|. +++|+++.++|+|.|++||++..                                          ..
T Consensus         4 dideC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g------------------------------------------~~   40 (82)
T 1emn_A            4 DMDECKEPDVCK-HGQCINTDGSYRCECPFGYILAG------------------------------------------NE   40 (82)
T ss_dssp             CCCSSSSTTSCS-SSEECCCSSCCCEECCTTEEEET------------------------------------------TE
T ss_pred             ccccCCCCCCcC-CCEEEecCCCEEEECCCCeECCC------------------------------------------Cc
Confidence            3788985 8897 58999999999999999998533                                          22


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC
Q psy9424         221 CNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA  273 (535)
Q Consensus       221 C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  273 (535)
                      |.++++|..               ..+|.+ ++|+++.++|+|.|++||+|..
T Consensus        41 C~dideC~~---------------~~~C~~-~~C~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           41 CVDTDECSV---------------GNPCGN-GTCKNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             EEECCGGGT---------------CCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred             cCCcccccC---------------CCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence            556676642               367875 6999999999999999999874

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.95  E-value=5.2e-10  Score=98.69  Aligned_cols=83  Identities=28%  Similarity=0.651  Sum_probs=64.5

Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCC--CCCCCCee-ec
Q psy9424         220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAK--PCGPGARC-DN  296 (535)
Q Consensus       220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~--~C~~~~~C-~~  296 (535)
                      .|.++++|.                +.+|.++++|+++.++|+|.|++||+|.   .|+++++|...  +|.+  +| ++
T Consensus        44 ~c~dideC~----------------~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~~deC~~~~~~C~~--~C~~n  102 (146)
T 1x7a_L           44 QYVDGDQCE----------------PNPCLNGGLCKDDINSYECWCQVGFEGK---NCELDATCNIKNGRCKQ--FCKTG  102 (146)
T ss_dssp             ------CCS----------------SCSSCTTCEEEECSSCEEEECCSSEEST---TTCEECCTTSGGGSCSS--BCCCC
T ss_pred             cCCCcCcCC----------------CCCCCCCCEeECCCCCEEEecCCCCcCC---cCCCCccccCCCCCCcC--CCCCC
Confidence            466777775                4789999999999999999999999998   78888999764  4654  99 99


Q ss_pred             CCCCeeeeCCCCCccCCCCCCCCCCCC
Q psy9424         297 SRGSYKCLCPLGLVGDPYGAGCVSASQ  323 (535)
Q Consensus       297 ~~g~~~C~C~~Gy~g~~c~~~C~~~~~  323 (535)
                      +.++|+|.|++||++....+.|.++++
T Consensus       103 ~~g~y~C~C~~Gy~l~~dG~~C~~~~~  129 (146)
T 1x7a_L          103 ADSKVLCSCTTGYRLAPDQKSCKPAVP  129 (146)
T ss_dssp             SSSCCCCBCCTTEEECTTSSSEEECSS
T ss_pred             CCCCEEeEcCCCcEeCCCCCcCCCCCC
Confidence            999999999999996655555665544

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.93  E-value=9.6e-10  Score=119.50  Aligned_cols=158  Identities=27%  Similarity=0.652  Sum_probs=104.1

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCC---------cCCCC----CCCCCCeeecCCCCeeeeCC-----
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLID---------FCAAK----PCGPGARCDNSRGSYKCLCP-----  306 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~---------~C~~~----~C~~~~~C~~~~g~~~C~C~-----  306 (535)
                      +.+|.++|+|..    ..|.|.+||+|..++ | +++         .|...    +|.++|+|+..    +|.|+     
T Consensus       434 s~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce-c-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~  503 (687)
T 3k6s_B          434 RSLCHGKGFLEC----GICRCDTGYIGKNCE-C-QTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVP  503 (687)
T ss_dssp             SSTGGGSEEESS----SSEEECSSEESTTSC-E-ESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCST
T ss_pred             CCCCCCCCEEeC----CEeEcCCCCcCCccc-c-cCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCC
Confidence            567888888873    369999999999554 2 222         47543    49999999843    89999     


Q ss_pred             -CCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCC--Cceee
Q psy9424         307 -LGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGV--NSLCN  383 (535)
Q Consensus       307 -~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~--~~~C~  383 (535)
                       +||+|..|+.   +...|...                                            +...|.+  +++|.
T Consensus       504 ~~G~~G~~Ce~---~~~~C~~~--------------------------------------------~~~~C~~~~~G~C~  536 (687)
T 3k6s_B          504 GKLIYGQYCEC---DTINCERY--------------------------------------------NGQVCGGPGRGLCF  536 (687)
T ss_dssp             TCCEESTTSCE---ESSCSCEE--------------------------------------------TTEETSHHHHEEEE
T ss_pred             CCCcccccccc---ccccccCC--------------------------------------------CCcCcCCCCCCeEE
Confidence             9999998762   22333210                                            0123444  55665


Q ss_pred             ecCCCeeeeCCCCCcCCCCC------CCCcc---CCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCC
Q psy9424         384 VLTHRKVCFCPRGFTGDPET------ECVRI---TCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPC  454 (535)
Q Consensus       384 ~~~g~~~C~C~~G~~g~~~~------~C~~~---~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C  454 (535)
                      .  +  +|.|++||+|..|+      .|...   +|.++|+|+.+   .|.   |.+||       .|..|+.   -..|
T Consensus       537 ~--g--~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~g---~C~---C~~Gy-------~G~~Ce~---c~~C  596 (687)
T 3k6s_B          537 C--G--KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCN---VCE---CHSGY-------QLPLCQE---CPGC  596 (687)
T ss_dssp             T--T--EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCSS---CBC---CSTTC-------CTTTTCC---CTTS
T ss_pred             C--C--EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCCC---EEE---CCCCC-------cCCCCCC---CCCC
Confidence            3  2  79999999998875      45443   68888888763   576   77777       6777775   2345


Q ss_pred             CCCCCCCCCeeeeCCCCceeeC-CCCCcCCCCC
Q psy9424         455 SPAPCGPNAQCSVANHRPLCSC-PAGLMGLPSA  486 (535)
Q Consensus       455 ~~~~C~~~~~C~~~~g~~~C~C-~~G~~G~~c~  486 (535)
                       +.+|.+++.|+      .|.+ ..|..+..|+
T Consensus       597 -~~~C~~~g~Cv------~C~~~~~G~~~~~C~  622 (687)
T 3k6s_B          597 -PSPCGKYISCA------ECLKFEKGPFGKNCS  622 (687)
T ss_dssp             -CCCCTTTHHHH------TTTTSCSCCCSSCSS
T ss_pred             -CcccCCCCCCC------cccCCCCCCCCcccc
Confidence             56788888887      4544 2344444443

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.93  E-value=6.6e-10  Score=88.91  Aligned_cols=64  Identities=30%  Similarity=0.630  Sum_probs=52.1

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCC--CCCccC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCP--LGLVGD  312 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~--~Gy~g~  312 (535)
                      .+| ++++|+++.++|+|.|++||++.. ...|+++++|...+|.  ++|++++++|+|.|+  +||...
T Consensus        11 ~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~g~~G~~~~   77 (87)
T 1z6c_A           11 SIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCDGKKGFKLA   77 (87)
T ss_dssp             SSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECCSSSCCBCC
T ss_pred             CCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECCCCcCCccc
Confidence            348 678999999999999999999431 1268899999888996  699999999999995  555443

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.92  E-value=8.7e-10  Score=93.03  Aligned_cols=86  Identities=20%  Similarity=0.328  Sum_probs=62.9

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeC---CcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLI---DFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSAS  322 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~---~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~  322 (535)
                      ..|.++++|+++.++|+|.|++||+|.   .|+++   ++|...+..-..+|+++.++|+|.|++||+|....+.|+++.
T Consensus        20 ~~C~~~g~C~~~~~~y~C~C~~G~~G~---~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~   96 (114)
T 1aut_L           20 SLCCGHGTCIDGIGSFSCDCRSGWEGR---FCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAV   96 (114)
T ss_dssp             STTTTSEEECCCSSCCCEEECTTEEST---TSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred             ccCCCcCCCCCCCCCcEeeCCCCCcCC---CcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence            348889999999999999999999999   56653   467653221123999999999999999999988777776542


Q ss_pred             CCCCCCCCCCCCEEec
Q psy9424         323 QCTRDDQCPPGAHCVK  338 (535)
Q Consensus       323 ~C~~~~~C~~~~~C~~  338 (535)
                      +    .+|.+.+.++.
T Consensus        97 ~----~pC~~~~~~i~  108 (114)
T 1aut_L           97 K----FPCGRPWKRME  108 (114)
T ss_dssp             S----SCTTCCC----
T ss_pred             c----cCCCCCCccCC
Confidence            2    36666666654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.92  E-value=9.4e-10  Score=117.94  Aligned_cols=63  Identities=25%  Similarity=0.559  Sum_probs=13.3

Q ss_pred             eeeeCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeeeC
Q psy9424         389 KVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVA  468 (535)
Q Consensus       389 ~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~~  468 (535)
                      ++|.|++||+|..+++|                        .+||.       +.. .+   ++.|.+.+|.+++.+...
T Consensus       460 g~C~C~~g~~G~~Ce~C------------------------~~G~~-------g~~-~~---~~~C~~C~C~~~gs~~~~  504 (525)
T 4aqs_A          460 GYCYCKRLVTGQRCDQC------------------------LPQHW-------GLS-ND---LDGCRPCDCDLGGALNNS  504 (525)
T ss_dssp             CCBCBCTTCCSTTTCC----------------------------------------------------------------
T ss_pred             CEEECCCCCcCCCcccC------------------------CCCcc-------CCC-CC---CCCCcCCCCCCCCccCCc
Confidence            47999999999986533                        33441       111 11   567777788888776543


Q ss_pred             --CCCceeeCCCCCcCCCCC
Q psy9424         469 --NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       469 --~g~~~C~C~~G~~G~~c~  486 (535)
                        ...++|.|++||+|..|+
T Consensus       505 C~~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          505 CSEDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             --------------------
T ss_pred             cCCCCCeeECCCCCcCCCCC
Confidence              234589999999999875

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.91  E-value=8e-10  Score=97.48  Aligned_cols=83  Identities=24%  Similarity=0.504  Sum_probs=60.7

Q ss_pred             CcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424         140 MQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV  219 (535)
Q Consensus       140 ~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~  219 (535)
                      ..++|+|+++||.++++|+++.++|+|.|++||+|..|+                                         
T Consensus        45 c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-----------------------------------------   83 (146)
T 1x7a_L           45 YVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-----------------------------------------   83 (146)
T ss_dssp             -----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-----------------------------------------
T ss_pred             CCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-----------------------------------------
Confidence            345899999999999999999999999999999998843                                         


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCcc-ccCCCCeeeeCCCCCccCC-CCCCeeCCc
Q psy9424         220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALC-SAEKHKQICYCQPGYTGDA-YFGCHLIDF  282 (535)
Q Consensus       220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C-~~~~g~~~C~C~~G~~G~~-~~~C~~~~~  282 (535)
                         ++++|...              +.+|.+  +| +++.++|+|.|++||++.. ...|+++++
T Consensus        84 ---~~deC~~~--------------~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~  129 (146)
T 1x7a_L           84 ---LDATCNIK--------------NGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVP  129 (146)
T ss_dssp             ---EECCTTSG--------------GGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEEECSS
T ss_pred             ---CCccccCC--------------CCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCC
Confidence               23455421              245765  89 8999999999999999321 116777654

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.91  E-value=5.5e-10  Score=89.18  Aligned_cols=68  Identities=24%  Similarity=0.546  Sum_probs=53.8

Q ss_pred             CCCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCC
Q psy9424         374 GACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDP  453 (535)
Q Consensus       374 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~  453 (535)
                      ..|.+ ++|+++.++|+|.|++||++...                                      .+..|++   ||+
T Consensus        11 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~--------------------------------------~g~~C~d---ide   48 (86)
T 1lmj_A           11 DLCGR-GQCVNTPGDFECKCDEGYESGFM--------------------------------------MMKNCMD---IDE   48 (86)
T ss_dssp             STTTT-SCEEEETTEEEECCCSSEEECTT--------------------------------------TSSSEEE---CCH
T ss_pred             CCCCC-CEEECCCCCEEeeCCCCcCccCC--------------------------------------CCCccCC---ccc
Confidence            35643 58999999999999999987531                                      2445555   888


Q ss_pred             CCCC--CCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         454 CSPA--PCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       454 C~~~--~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                      |...  .|. +++|+++.++|+|.|++||++..
T Consensus        49 C~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A           49 CQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             HHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred             ccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence            8744  476 58999999999999999999875

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.89  E-value=6.2e-10  Score=89.09  Aligned_cols=66  Identities=27%  Similarity=0.620  Sum_probs=52.5

Q ss_pred             CCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCC
Q psy9424         375 ACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPC  454 (535)
Q Consensus       375 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C  454 (535)
                      .| ++++|+++.++|+|.|++||++..                                       .+..|++   ||+|
T Consensus        12 ~C-~~~~C~n~~g~y~C~C~~G~~~~~---------------------------------------~g~~C~d---ideC   48 (87)
T 1z6c_A           12 IC-GTAVCKNIPGDFECECPEGYRYNL---------------------------------------KSKSCED---IDEC   48 (87)
T ss_dssp             SB-TTSSCCCBTTBCCCSSSTTCEEET---------------------------------------TTTEEEC---CCHH
T ss_pred             CC-CCCEeECCCCCEEEECCCCceECC---------------------------------------CCCcCCC---cCee
Confidence            46 677899999999999999998753                                       2344554   8888


Q ss_pred             CCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         455 SPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       455 ~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      ..++|.  ++|+++.++|+|.|+ ||.|..++
T Consensus        49 ~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~   77 (87)
T 1z6c_A           49 SENMCA--QLCVNYPGGYTCYCD-GKKGFKLA   77 (87)
T ss_dssp             HHSCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred             CCCCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence            878897  799999999999998 77776554

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.82  E-value=2.6e-09  Score=90.14  Aligned_cols=96  Identities=26%  Similarity=0.510  Sum_probs=63.2

Q ss_pred             ccCCCCCCC--------CCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         142 CRPACEGIL--------CGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGP  213 (535)
Q Consensus       142 c~~~C~~~~--------C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~  213 (535)
                      ++|+|+..|        |.++++|+++.++|+|.|++||+|..|+.                                  
T Consensus         5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~----------------------------------   50 (114)
T 1aut_L            5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQR----------------------------------   50 (114)
T ss_dssp             ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCE----------------------------------
T ss_pred             ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCc----------------------------------
Confidence            366777777        99999999999999999999999998541                                  


Q ss_pred             CccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcCCCCCCCCCC
Q psy9424         214 VGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFCAAKPCGPGA  292 (535)
Q Consensus       214 ~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C~~~~C~~~~  292 (535)
                           .  .+.++|...              ...|.+  +|+++.++|+|.|++||+|.. ...|+++.   ..||...+
T Consensus        51 -----~--~~~~~C~~~--------------~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~---~~pC~~~~  104 (114)
T 1aut_L           51 -----E--VSFLNCSLD--------------NGGCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV---KFPCGRPW  104 (114)
T ss_dssp             -----E--CCSSSSSSG--------------GGGCSS--EEEECSSSEEEECCTTEEECTTSSCEEECS---SSCTTCCC
T ss_pred             -----C--CcCCcCcCC--------------CCCCCC--EeECCCCCEEeECCCCeeECCCCCccCcCc---ccCCCCCC
Confidence                 0  001233211              234553  899999999999999999643 12566543   35787777


Q ss_pred             eeecC
Q psy9424         293 RCDNS  297 (535)
Q Consensus       293 ~C~~~  297 (535)
                      .++..
T Consensus       105 ~~i~~  109 (114)
T 1aut_L          105 KRMEK  109 (114)
T ss_dssp             -----
T ss_pred             ccCCC
Confidence            66654

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.81  E-value=2.4e-09  Score=94.09  Aligned_cols=76  Identities=24%  Similarity=0.574  Sum_probs=61.4

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee-CCcCCCCCCCCCC---eeecCCC-CeeeeCCCCCccCCCCCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGA---RCDNSRG-SYKCLCPLGLVGDPYGAGCV  319 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~-~~~C~~~~C~~~~---~C~~~~g-~~~C~C~~Gy~g~~c~~~C~  319 (535)
                      +.+|.++++|+++.++|+|.|++||+|.   .|++ ++++...++.+++   +|+++.+ +|+|.|++||++....+.|.
T Consensus        52 ~~pC~n~g~C~~~~g~y~C~C~~G~~G~---~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~  128 (142)
T 2c4f_L           52 SSPCQNGGSCKDQLQSYICFCLPAFEGR---NCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT  128 (142)
T ss_dssp             GCCCCTTCEEEEETTEEEEECCTTEEST---TSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred             CCCcCCCCEEeCCCCCEEeeCCCCccCC---ccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence            4789999999999999999999999999   6765 6776554555555   9999999 99999999999665555565


Q ss_pred             CCCC
Q psy9424         320 SASQ  323 (535)
Q Consensus       320 ~~~~  323 (535)
                      ++++
T Consensus       129 ~~~e  132 (142)
T 2c4f_L          129 PTVE  132 (142)
T ss_dssp             ESSS
T ss_pred             CCCc
Confidence            5544

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.78  E-value=1.4e-09  Score=100.12  Aligned_cols=92  Identities=28%  Similarity=0.615  Sum_probs=31.3

Q ss_pred             CCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         135 NDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPV  214 (535)
Q Consensus       135 ~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~  214 (535)
                      .|++...++++|+.+||.++|+|+++.++|+|.|++||+|..|+.                                   
T Consensus        34 ~fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~-----------------------------------   78 (195)
T 1nfu_B           34 EFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL-----------------------------------   78 (195)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccc-----------------------------------
Confidence            455566678999999999999999999999999999999988531                                   


Q ss_pred             ccccccCCCC-CCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCCcCCCCCCC
Q psy9424         215 GCHRVECNSH-ADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLIDFCAAKPCG  289 (535)
Q Consensus       215 ~C~~~~C~~~-~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~~C~~~~C~  289 (535)
                              .+ ++|...              +.+|.+  +|+++.++|+|.|++||+    |.   .|+++.   ..||.
T Consensus        79 --------~i~deC~~~--------------~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~---~C~~~~---~~PC~  128 (195)
T 1nfu_B           79 --------FTRKLCSLD--------------NGDCDQ--FCHEEQNSVVCSCARGYTLADNGK---ACIPTG---PYPCG  128 (195)
T ss_dssp             ----------CCGGGTG--------------GGGCSS--EEEEETTEEEEECCTTEEECTTSS---CEEESS---SSCTT
T ss_pred             --------cccccccCC--------------CCCCCC--EeECCCCCeEEECCCCceeCCCCC---ccccCC---CCCCC
Confidence                    01 334311              245765  899999999999999999    55   677754   35665


Q ss_pred             CC
Q psy9424         290 PG  291 (535)
Q Consensus       290 ~~  291 (535)
                      +.
T Consensus       129 ~~  130 (195)
T 1nfu_B          129 KQ  130 (195)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.76  E-value=1.7e-09  Score=94.94  Aligned_cols=37  Identities=19%  Similarity=0.462  Sum_probs=34.0

Q ss_pred             ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      ++++|+++||.++++|+++.++|+|.|++||+|..|+
T Consensus        46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~   82 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   82 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccc
Confidence            4889999999999999999999999999999998854

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.73  E-value=2.6e-09  Score=88.79  Aligned_cols=68  Identities=32%  Similarity=0.640  Sum_probs=25.5

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAG  317 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~  317 (535)
                      ..|.  ++|+++.++|+|.|++||+|.....|++|++|.. .+|.  ++|+++.++|+|.|++||++....++
T Consensus        37 ~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~~d~~~  105 (107)
T 2w2n_E           37 GGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKA  105 (107)
T ss_dssp             GGCS--SEEECCSBSCEEECCTTCEEETTTEEEC---------------------------------------
T ss_pred             CCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--CeeecCCCCEEEECCCCceECCCCCc
Confidence            3454  4899999999999999999843237899999974 6786  69999999999999999998765543

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.72  E-value=2.3e-09  Score=93.20  Aligned_cols=84  Identities=27%  Similarity=0.599  Sum_probs=27.0

Q ss_pred             CCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy9424         136 DMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVG  215 (535)
Q Consensus       136 ~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~  215 (535)
                      |++....+++|+.+||.++++|+++.++|+|.|++||+|..|+..                                   
T Consensus        35 ~~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-----------------------------------   79 (134)
T 2vh0_B           35 FWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF-----------------------------------   79 (134)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccC-----------------------------------
Confidence            444445689999999999999999999999999999999885310                                   


Q ss_pred             cccccCCCC-CCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCC
Q psy9424         216 CHRVECNSH-ADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLID  281 (535)
Q Consensus       216 C~~~~C~~~-~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~  281 (535)
                              + ++|...              +.+|.+  +|+++.++|+|.|++||+    |.   .|++++
T Consensus        80 --------i~d~C~~~--------------~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~---~C~~~~  123 (134)
T 2vh0_B           80 --------TRKLCSLD--------------NGDCDQ--FCHEEQNSVVCSCARGYTLADNGK---ACIPTG  123 (134)
T ss_dssp             ---------CCGGGTG--------------GGGCSS--EEEEETTEEEEECCTTEEECTTSS---CEEESS
T ss_pred             --------CCCccccC--------------CCCCCC--EeECCCCCEEEECCCCcEECCCCC---ccCcCC
Confidence                    1 333211              245664  899999999999999999    55   677654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.70  E-value=5.9e-09  Score=111.70  Aligned_cols=56  Identities=29%  Similarity=0.553  Sum_probs=13.4

Q ss_pred             CeeeeCCCCCccCCCCCCe--------eCCcCCCCCCCCCCeeecC--CCCeeeeCCCCCccCCCC
Q psy9424         260 KQICYCQPGYTGDAYFGCH--------LIDFCAAKPCGPGARCDNS--RGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       260 ~~~C~C~~G~~G~~~~~C~--------~~~~C~~~~C~~~~~C~~~--~g~~~C~C~~Gy~g~~c~  315 (535)
                      ++.|.|++||+|..++.|.        +++.|.+.+|.+++.+...  ...++|.|++||+|..|+
T Consensus       459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             TCCBCBCTTCCSTTTCC-------------------------------------------------
T ss_pred             CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence            3469999999999665443        2466777778877766543  234579999999998765

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.68  E-value=3e-09  Score=92.38  Aligned_cols=72  Identities=25%  Similarity=0.714  Sum_probs=29.6

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee-C-CcCCCC--CCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-I-DFCAAK--PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~-~-~~C~~~--~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      +.+|.++++|+++.++|+|.|++||+|.   .|++ + ++|...  +|.+  +|++..++|+|.|++||++....+.|.+
T Consensus        47 ~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           47 TSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             -------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCcCCcccCCCCEEeeCCCCccCC---ccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccCc
Confidence            4789999999999999999999999998   6776 6 889763  4654  9999999999999999996554444544


Q ss_pred             C
Q psy9424         321 A  321 (535)
Q Consensus       321 ~  321 (535)
                      +
T Consensus       122 ~  122 (134)
T 2vh0_B          122 T  122 (134)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.63  E-value=5.3e-09  Score=96.20  Aligned_cols=81  Identities=23%  Similarity=0.688  Sum_probs=29.8

Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee-C-CcCCCC--CCCCCCeee
Q psy9424         220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-I-DFCAAK--PCGPGARCD  295 (535)
Q Consensus       220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~-~-~~C~~~--~C~~~~~C~  295 (535)
                      .|.++++|.                +.+|.++|+|++..++|+|.|++||+|.   .|++ + ++|...  +|.+  +|+
T Consensus        38 ~c~dideC~----------------~~pC~ngg~C~n~~g~y~C~C~~Gf~G~---~Ce~~i~deC~~~~~~C~~--~C~   96 (195)
T 1nfu_B           38 KYKDGDQCE----------------TSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCH   96 (195)
T ss_dssp             --------------------------------------------------------------CCGGGTGGGGCSS--EEE
T ss_pred             cCCCCcccC----------------CCCCCCCCEeECCCCCeeEeCCCCceec---cccccccccccCCCCCCCC--EeE
Confidence            466777775                4789999999999999999999999998   6766 5 889764  5654  999


Q ss_pred             cCCCCeeeeCCCCCccCCCCCCCCCC
Q psy9424         296 NSRGSYKCLCPLGLVGDPYGAGCVSA  321 (535)
Q Consensus       296 ~~~g~~~C~C~~Gy~g~~c~~~C~~~  321 (535)
                      +..++|+|.|++||++....+.|.++
T Consensus        97 n~~gsy~C~C~~Gy~l~~dG~~C~~~  122 (195)
T 1nfu_B           97 EEQNSVVCSCARGYTLADNGKACIPT  122 (195)
T ss_dssp             EETTEEEEECCTTEEECTTSSCEEES
T ss_pred             CCCCCeEEECCCCceeCCCCCccccC
Confidence            99999999999999955444445544

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.62  E-value=3.8e-08  Score=98.48  Aligned_cols=76  Identities=30%  Similarity=0.692  Sum_probs=67.4

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCC---CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAA---KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      +.+|.++++|++..++|+|.|++||+|.   .|+ ++++|..   .+|.+  +|++..++|+|.|++||++....+.|.+
T Consensus        10 ~~pC~~~g~C~~~~~~~~C~C~~g~~g~---~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~~~C~~   84 (317)
T 3h5c_B           10 SQPCLHNGSCQDSIWGYTCTCSPGYEGS---NCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVP   84 (317)
T ss_dssp             SCCCTTTCCCCCCSSSCCCCCSSSCCSS---SSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred             CCCCCCCCEeECCCCCeEEECCCCCcCC---ccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccccccccccc
Confidence            4789999999999999999999999999   676 8999986   68976  9999999999999999999887777887


Q ss_pred             CCCCC
Q psy9424         321 ASQCT  325 (535)
Q Consensus       321 ~~~C~  325 (535)
                      +++|.
T Consensus        85 ~~~c~   89 (317)
T 3h5c_B           85 HDQCA   89 (317)
T ss_dssp             CSSCC
T ss_pred             ccccc
Confidence            77763

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.59  E-value=1e-08  Score=85.27  Aligned_cols=80  Identities=19%  Similarity=0.452  Sum_probs=36.0

Q ss_pred             CCCCCCCCcccCCCCC--CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         133 RSNDMGQMQCRPACEG--ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHS  210 (535)
Q Consensus       133 ~~~~~G~~~c~~~C~~--~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~  210 (535)
                      ..+|.|..+.+++|..  ..|.  ++|+++.++|+|.|++||+|..                                  
T Consensus        19 ~~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~----------------------------------   62 (107)
T 2w2n_E           19 ENLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVA----------------------------------   62 (107)
T ss_dssp             -CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEET----------------------------------
T ss_pred             CCCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccC----------------------------------
Confidence            4567777777889975  3564  5999999999999999999843                                  


Q ss_pred             CCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccC
Q psy9424         211 GGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGD  272 (535)
Q Consensus       211 ~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~  272 (535)
                             ...|+++++|..               +.+|.  ++|+++.++|+|.|++||++.
T Consensus        63 -------g~~C~dideC~~---------------~~~C~--~~C~n~~gsy~C~C~~Gy~~~  100 (107)
T 2w2n_E           63 -------QRRCEDIDECQD---------------PDTCS--QLCVNLEGGYKCQCEEGFQLD  100 (107)
T ss_dssp             -------TTEEEC-------------------------------------------------
T ss_pred             -------CCccccccccCC---------------CCCcC--CeeecCCCCEEEECCCCceEC
Confidence                   133666777752               25675  599999999999999999976

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.49  E-value=1.8e-07  Score=93.57  Aligned_cols=84  Identities=26%  Similarity=0.591  Sum_probs=65.6

Q ss_pred             ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424         142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC  221 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C  221 (535)
                      ++++|.++||.++++|++..++|+|.|++||+|..|++                                          
T Consensus         4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~------------------------------------------   41 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCEL------------------------------------------   41 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCC------------------------------------------
T ss_pred             cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCcccc------------------------------------------
Confidence            47899999999999999999999999999999988431                                          


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcC
Q psy9424         222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFC  283 (535)
Q Consensus       222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C  283 (535)
                       ++++|....             ..+|.+  +|+++.++|+|.|.+||+|.. ...|.++++|
T Consensus        42 -~~~eC~~~~-------------~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c   88 (317)
T 3h5c_B           42 -AKNECHPER-------------TDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC   88 (317)
T ss_dssp             -CSSSCCTTC-------------TTSCSS--EEECCSSSCEEECCTTEECCTTSSCCEECSSC
T ss_pred             -CcccCCCCC-------------CCCCcC--ccccCCCeeEEecccccccccccccccccccc
Confidence             445664210             267876  899999999999999999853 2367777666

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.46  E-value=2.4e-06  Score=94.72  Aligned_cols=72  Identities=32%  Similarity=0.665  Sum_probs=58.3

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCC-CCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCA-AKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSA  321 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~  321 (535)
                      ..|.  .+|+++.++|+|.|++||++....+|+++++|+ ..+|.  ++|+++.++|+|.|++||++....++|..+
T Consensus       302 ~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~  374 (699)
T 1n7d_A          302 GGCS--HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV  374 (699)
T ss_dssp             TTSC--TTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred             cCcC--CCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeeeeecccccCCCCCccccc
Confidence            4464  479999999999999999964333799999997 46785  489999999999999999987766667644

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.41  E-value=2.9e-06  Score=93.96  Aligned_cols=79  Identities=20%  Similarity=0.538  Sum_probs=57.5

Q ss_pred             ccCCCCCC--CCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424         142 CRPACEGI--LCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV  219 (535)
Q Consensus       142 c~~~C~~~--~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~  219 (535)
                      .+++|...  .|.  ++|+++.++|+|.|++||.+..                                         ..
T Consensus       293 ~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~-----------------------------------------~~  329 (699)
T 1n7d_A          293 GTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVA-----------------------------------------QR  329 (699)
T ss_dssp             CCCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCS-----------------------------------------SS
T ss_pred             ccccccccccCcC--CCcccCCCCcEEeCCCCeEcCC-----------------------------------------CC
Confidence            36677652  353  5899999999999999999733                                         13


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCC-CCCeeC
Q psy9424         220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY-FGCHLI  280 (535)
Q Consensus       220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~-~~C~~~  280 (535)
                      .|+++++|..               +.+|.  .+|+++.++|+|.|.+||++..- .+|.++
T Consensus       330 ~C~dideC~~---------------~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~  374 (699)
T 1n7d_A          330 RCEDIDECQD---------------PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV  374 (699)
T ss_dssp             CCCCCCCCSS---------------SSSCT--TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred             cccCccccCC---------------CCccc--cccccCCCCeeeeeecccccCCCCCccccc
Confidence            4667787753               35675  38999999999999999997531 245543

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.38  E-value=1.3e-07  Score=67.80  Aligned_cols=42  Identities=21%  Similarity=0.344  Sum_probs=34.4

Q ss_pred             CCcCCCCCcCCCCCCCCCCCCeee-----eCCCCceeeCCCCCcCCCCC
Q psy9424         443 LSCRSAECVDPCSPAPCGPNAQCS-----VANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       443 ~~C~~~~c~d~C~~~~C~~~~~C~-----~~~g~~~C~C~~G~~G~~c~  486 (535)
                      ..|+..  +|+|+++||.|+|+|+     +..++|+|.|++||+|..|+
T Consensus         2 ~~c~~~--~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G            2 TSHLVK--CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             -CCEEE--CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred             CCCccc--CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence            345544  8999999999999994     56689999999999999987

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.30  E-value=8.4e-07  Score=99.23  Aligned_cols=70  Identities=31%  Similarity=0.631  Sum_probs=57.6

Q ss_pred             ccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424         253 LCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC  324 (535)
Q Consensus       253 ~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C  324 (535)
                      .|+++.++|+|.|++||.+.....|+++++|.. .+|.  .+|+++.++|+|.|++||.+....+.|.+++++
T Consensus       325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          325 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             EEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred             cccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC--CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence            899999999999999997532237999999973 4454  589999999999999999998777778776654

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.29  E-value=5.5e-07  Score=59.95  Aligned_cols=36  Identities=28%  Similarity=0.592  Sum_probs=33.9

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +|+|.++||.++++|++..++|+|.|++||+|..|+
T Consensus         3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            789999999999999999999999999999999875

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.19  E-value=7.2e-07  Score=79.88  Aligned_cols=29  Identities=31%  Similarity=0.649  Sum_probs=24.3

Q ss_pred             CCCCCCeeeecC--CCcee-eCCCCCcCCCCC
Q psy9424          40 VCGRNAECAVVN--HTPRC-TCVAGTVGDPKY   68 (535)
Q Consensus        40 ~C~~~g~C~~~~--~~~~C-~C~~Gf~G~~c~   68 (535)
                      +|.++++|+...  +.++| .|++||+|..++
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce   33 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE   33 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence            588899998865  57899 799999999665

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.17  E-value=8.1e-07  Score=63.63  Aligned_cols=43  Identities=19%  Similarity=0.268  Sum_probs=33.9

Q ss_pred             CcccCcCCcCCCCCCCCCCCCCCee-----eecCCCceeeCCCCCcCCCCC
Q psy9424          23 SAACVDGRCRNPCEADEVCGRNAEC-----AVVNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        23 g~~C~~~~~~d~C~~~~~C~~~g~C-----~~~~~~~~C~C~~Gf~G~~c~   68 (535)
                      |.+|+..  +|+|. .+||.++|+|     ++..++|+|+|++||+|..|+
T Consensus         1 G~~c~~~--~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G            1 GTSHLVK--CAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             --CCEEE--CCSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred             CCCCccc--CCCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence            5667765  99998 8999999999     456679999999999999654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.16  E-value=2e-06  Score=88.85  Aligned_cols=72  Identities=32%  Similarity=0.624  Sum_probs=59.2

Q ss_pred             CCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCC
Q psy9424         248 CGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSA  321 (535)
Q Consensus       248 C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~  321 (535)
                      +...+.|+++.++|+|.|++||++.....|++++||.. .+|.+  .|+++.++|.|.|.+||++....+.|..+
T Consensus         8 ~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~~~~~C~~~   80 (400)
T 3p5b_L            8 GGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTKACKAV   80 (400)
T ss_dssp             GGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCTTTSSCCCS
T ss_pred             CCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceeeeccccccccccccceeec
Confidence            33346999999999999999999533337999999974 67865  89999999999999999998777767654

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.15  E-value=9.8e-07  Score=82.55  Aligned_cols=107  Identities=21%  Similarity=0.429  Sum_probs=72.3

Q ss_pred             CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q psy9424         149 ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCS  228 (535)
Q Consensus       149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~  228 (535)
                      ..|+++|+|+.    ..|+|++||+|..|+....                    ...        ..+....|....   
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~--------------------~~~--------~~~~~~~C~~~~---  140 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQ--------------------GRS--------SQELEGSCRKDN---  140 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTTEESTTSCEECC--------------------CCC---------GGGGGGGBSST---
T ss_pred             CccCCCceEEC----CEEECCCCccCCcccccCc--------------------ccc--------cccCCCcCCCCC---
Confidence            56888999986    4899999999999762100                    000        000001122100   


Q ss_pred             CCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCC------CccCCCCCCeeCCcCCCC---CCCCC--CeeecC
Q psy9424         229 GDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPG------YTGDAYFGCHLIDFCAAK---PCGPG--ARCDNS  297 (535)
Q Consensus       229 ~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G------~~G~~~~~C~~~~~C~~~---~C~~~--~~C~~~  297 (535)
                                     ...+|.++|+|+..    .|.|.+|      |+|..++  .+++.|...   +|.++  |+|...
T Consensus       141 ---------------~~~~Csg~G~C~~g----~C~C~~gw~~~~~~~G~~Ce--~~~~~C~~~~g~~C~~~~~G~C~~g  199 (217)
T 2p28_B          141 ---------------NSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCE--CDTINCERYNGQVCGGPGRGLCFCG  199 (217)
T ss_dssp             ---------------TSCBGGGTEEEETT----EEEECCCCSTTCCEESTTSC--EESSCSCEETTEETTCTTTEEEETT
T ss_pred             ---------------CCCCCCCCCEEeCC----ceECCCCCCCcccEECCCcc--cCCccCCCCCCCCCCCCCCcEEeCC
Confidence                           13678889999852    6999999      5898443  245678654   69887  999863


Q ss_pred             CCCeeeeCCCCCccCCCC
Q psy9424         298 RGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       298 ~g~~~C~C~~Gy~g~~c~  315 (535)
                          +|.|.+||+|..|+
T Consensus       200 ----~C~C~~G~~G~~C~  213 (217)
T 2p28_B          200 ----KCRCHPGFEGSACQ  213 (217)
T ss_dssp             ----EEEECTTEESTTSC
T ss_pred             ----eeECCCCCccCCcC
Confidence                89999999999875

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.14  E-value=1.5e-06  Score=57.75  Aligned_cols=37  Identities=22%  Similarity=0.425  Sum_probs=33.9

Q ss_pred             ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      ++++|.++||.++++|++..++|+|.|++||+|..|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            3788988999999999999999999999999999875

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.02  E-value=9.4e-06  Score=90.75  Aligned_cols=71  Identities=20%  Similarity=0.533  Sum_probs=53.6

Q ss_pred             CeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCccc
Q psy9424         155 ALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCE  234 (535)
Q Consensus       155 g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~  234 (535)
                      ..|+++.++|+|.|++||.+..                                         ...|.++++|..     
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l~~-----------------------------------------g~~C~dideC~~-----  357 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQLVA-----------------------------------------QRRCEDIDECQD-----  357 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEEET-----------------------------------------TTEEECCCCCSS-----
T ss_pred             ccccCCCCCcccCCCCCCccCC-----------------------------------------CCccccCcccCC-----
Confidence            4899999999999999998632                                         134667788752     


Q ss_pred             CCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcC
Q psy9424         235 DHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFC  283 (535)
Q Consensus       235 ~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C  283 (535)
                                +.+|.  .+|+++.++|+|.|.+||.+.. ..+|.++++.
T Consensus       358 ----------~~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          358 ----------PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             ----------SSSCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred             ----------CCCCC--CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence                      35675  3899999999999999998743 2257776654

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.99  E-value=2.3e-06  Score=80.08  Aligned_cols=97  Identities=24%  Similarity=0.566  Sum_probs=68.2

Q ss_pred             CCCCCCCceeeecCCCeeeeCCCCCcCCCCC-------------CCCc----cCCCCCCcccCCCCCccCCCCCCCCCcC
Q psy9424         373 QGACGVNSLCNVLTHRKVCFCPRGFTGDPET-------------ECVR----ITCLSHADCYPGGGSLCLANLCTRGCSA  435 (535)
Q Consensus       373 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~-------------~C~~----~~C~~~~~C~~~~g~~C~~g~C~~g~~~  435 (535)
                      ...|..+++|+.    .+|+|++||+|..++             .|..    .+|.++|+|+.+   .|.   |.++|..
T Consensus        95 ~~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g---~C~---C~~gw~~  164 (217)
T 2p28_B           95 RSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG---QCL---CHTSDVP  164 (217)
T ss_dssp             -CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT---EEE---ECCCCST
T ss_pred             CCccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCC---ceE---CCCCCCC
Confidence            346777888874    389999999999873             2542    368888999853   566   6676311


Q ss_pred             CCCCCCCCCcCCCCCcCCCCCC---CCCCC--CeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         436 DTDCPAALSCRSAECVDPCSPA---PCGPN--AQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       436 ~~~C~~g~~C~~~~c~d~C~~~---~C~~~--~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      ... .+|..|+..  ++.|...   +|+++  |+|+.    .+|.|.+||+|..|+
T Consensus       165 ~~~-~~G~~Ce~~--~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~  213 (217)
T 2p28_B          165 GKL-IYGQYCECD--TINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ  213 (217)
T ss_dssp             TCC-EESTTSCEE--SSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred             ccc-EECCCcccC--CccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence            000 067888743  5667633   79888  99985    299999999999886

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.96  E-value=3.8e-06  Score=86.75  Aligned_cols=78  Identities=21%  Similarity=0.510  Sum_probs=59.3

Q ss_pred             CCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q psy9424         144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNS  223 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~  223 (535)
                      |||...++...+.|+++.++|.|.|++||.+..                                         ...|++
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~-----------------------------------------~~~C~d   39 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA-----------------------------------------QRRCED   39 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEECS-----------------------------------------SSCEEE
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCcCC-----------------------------------------CCcccC
Confidence            467766766678999999999999999998632                                         134667


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCC-CCCee
Q psy9424         224 HADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY-FGCHL  279 (535)
Q Consensus       224 ~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~-~~C~~  279 (535)
                      +++|..               +.+|.+  .|+++.++|.|.|.+||++... ..|..
T Consensus        40 ideC~~---------------~~~C~~--~C~n~~g~~~C~C~~g~~~~~~~~~C~~   79 (400)
T 3p5b_L           40 IDECQD---------------PDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTKACKA   79 (400)
T ss_dssp             CCCCST---------------TSSCSS--CCBCCSSSCBCCCCTTCCCCTTTSSCCC
T ss_pred             chhhhc---------------cCCCCC--ccCCCccceeeeccccccccccccceee
Confidence            788753               367865  8999999999999999997532 24544

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.90  E-value=9e-06  Score=57.96  Aligned_cols=36  Identities=19%  Similarity=0.397  Sum_probs=32.8

Q ss_pred             cCCCCCC---CCCCCCeee--eCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPA---PCGPNAQCS--VANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~  486 (535)
                      |++|.+.   ||.++|+|+  +..++|+|.|++||+|..|+
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   43 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred             cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence            7888865   999999999  78899999999999999986

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=97.84  E-value=1.4e-05  Score=71.36  Aligned_cols=29  Identities=21%  Similarity=0.548  Sum_probs=24.5

Q ss_pred             CCCCCCeeccCC--CCcee-cCCCCCCCCCCC
Q psy9424         150 LCGRNALCTASD--HHATC-SCKPGYVGHPGP  178 (535)
Q Consensus       150 ~C~~~g~C~~~~--~~~~C-~C~~Gf~g~~c~  178 (535)
                      ||.++++|+...  +.++| .|++||+|..|+
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce   33 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE   33 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence            577889998765  56899 799999999986

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.81  E-value=4.2e-06  Score=85.97  Aligned_cols=69  Identities=29%  Similarity=0.738  Sum_probs=21.7

Q ss_pred             CCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCCcCC-CCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         246 NPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLIDFCA-AKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       246 ~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      ..|.+  .|++..++|+|.|++||+    |.   .|+++++|. ..+|.+  .|+++.++|+|.|++||+.....+.|..
T Consensus        11 ~~c~~--~C~~~~g~~~C~C~~G~~l~~~~~---~C~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~~   83 (386)
T 3v65_B           11 GGCAQ--KCQMIRGAVQCTCHTGYRLTEDGR---TCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKA   83 (386)
T ss_dssp             ----------------------------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEEE
T ss_pred             CCCCC--CCcCCCCCcEeECCCCceECCCCC---ccCccceeCCcCcccC--cCCCCCCCCeEEECCCceEcCCCCeECC
Confidence            44653  898888999999999998    55   788999996 468875  4999999999999999997665555654


Q ss_pred             C
Q psy9424         321 A  321 (535)
Q Consensus       321 ~  321 (535)
                      +
T Consensus        84 ~   84 (386)
T 3v65_B           84 L   84 (386)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.78  E-value=3.2e-06  Score=61.88  Aligned_cols=36  Identities=33%  Similarity=0.839  Sum_probs=33.7

Q ss_pred             cCCCCCCCCCCC--CeeeeCCCCceeeCCCCCc-CCCCC
Q psy9424         451 VDPCSPAPCGPN--AQCSVANHRPLCSCPAGLM-GLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-G~~c~  486 (535)
                      +|+|.++||.++  |+|++..++|+|.|++||+ |..|+
T Consensus        11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            789989999999  8999999999999999999 98885

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.76  E-value=1.7e-05  Score=54.46  Aligned_cols=34  Identities=15%  Similarity=0.209  Sum_probs=29.2

Q ss_pred             CCCCC---CCCCCCeee--eCCCCceeeCCCCCcCCCCC
Q psy9424         453 PCSPA---PCGPNAQCS--VANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       453 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +|.+.   ||.++|+|+  +..++|+|.|++||+|..|+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence            45555   999999998  67789999999999999886

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.75  E-value=6.3e-06  Score=84.59  Aligned_cols=83  Identities=19%  Similarity=0.496  Sum_probs=19.7

Q ss_pred             ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424         142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC  221 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C  221 (535)
                      ++|+|..+++...++|.++.++|+|.|++||.+..                                        ....|
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~----------------------------------------~~~~C   41 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE----------------------------------------DGRTC   41 (386)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECC----------------------------------------CCCcc
Confidence            36888876655456899888999999999998543                                        01346


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCC
Q psy9424         222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLID  281 (535)
Q Consensus       222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~  281 (535)
                      .++++|..               +.+|.+  .|+++.++|+|.|.+||+... ...|..++
T Consensus        42 ~d~~eC~~---------------~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~   85 (386)
T 3v65_B           42 QDVNECAE---------------EGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKALG   85 (386)
T ss_dssp             -------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEEECS
T ss_pred             CccceeCC---------------cCcccC--cCCCCCCCCeEEECCCceEcCCCCeECCcc
Confidence            66777752               367875  499999999999999998432 12566543

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.71  E-value=2.7e-05  Score=55.47  Aligned_cols=38  Identities=29%  Similarity=0.650  Sum_probs=33.5

Q ss_pred             ccCCCCCC---CCCCCCeec--cCCCCceecCCCCCCCCCCCC
Q psy9424         142 CRPACEGI---LCGRNALCT--ASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       142 c~~~C~~~---~C~~~g~C~--~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      ++++|.+.   ||.++|+|+  +..++|+|.|++||+|..|++
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence            37788775   999999999  788999999999999999874

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.61  E-value=2.5e-05  Score=53.75  Aligned_cols=35  Identities=26%  Similarity=0.617  Sum_probs=30.4

Q ss_pred             cCCCCC---CCCCCCCeeeeCC--CCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSP---APCGPNAQCSVAN--HRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~---~~C~~~~~C~~~~--g~~~C~C~~G~~G~~c~  486 (535)
                      |++|.+   +||.| |+|++..  ++|.|.|++||+|..|+
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce   42 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence            678876   89999 8999754  68999999999999986

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.57  E-value=9.3e-06  Score=85.22  Aligned_cols=41  Identities=22%  Similarity=0.550  Sum_probs=30.4

Q ss_pred             ccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          15 LQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        15 c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      .+|.++|.|..|.    +++|.  .+|.+ |+|++.   ++|.|.+||+|.
T Consensus       379 ~~C~~~~~g~~c~----~~~C~--~~C~n-G~C~~~---~~C~C~~G~~G~  419 (463)
T 2wg3_C          379 EECRATVQPAQTL----TSECS--RLCRN-GYCTPT---GKCCCSPGWEGD  419 (463)
T ss_dssp             GGGCCCCCCCCCC----CCHHH--HHCCS-EEECTT---SCEEECTTEEST
T ss_pred             ccCCCCCcCCCCc----ccccc--CCCCC-CccCCC---CeECCCCCcCCC
Confidence            5777888888887    55675  35775 788754   478888888887

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.49  E-value=6.7e-05  Score=51.38  Aligned_cols=34  Identities=24%  Similarity=0.426  Sum_probs=29.3

Q ss_pred             CCCCC---CCCCCCeec--cCCCCceecCCCCCCCCCCC
Q psy9424         145 ACEGI---LCGRNALCT--ASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       145 ~C~~~---~C~~~g~C~--~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      +|.+.   ||.++|+|+  +..++|+|.|++||+|..|+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence            45555   999999998  67789999999999999976

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.49  E-value=2e-05  Score=57.63  Aligned_cols=40  Identities=25%  Similarity=0.597  Sum_probs=35.5

Q ss_pred             CCeeCCcCCCCCCCCC--CeeecCCCCeeeeCCCCCc-cCCCC
Q psy9424         276 GCHLIDFCAAKPCGPG--ARCDNSRGSYKCLCPLGLV-GDPYG  315 (535)
Q Consensus       276 ~C~~~~~C~~~~C~~~--~~C~~~~g~~~C~C~~Gy~-g~~c~  315 (535)
                      .++++++|.++||.++  ++|++..++|+|.|++||+ |..|+
T Consensus         7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B            7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             hcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            4567899999999998  8999999999999999999 98764

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.42  E-value=3.3e-05  Score=57.20  Aligned_cols=36  Identities=22%  Similarity=0.497  Sum_probs=31.3

Q ss_pred             cCCCCCCCCCCCCeeee-----CCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSV-----ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~G~~c~  486 (535)
                      .|+|.++||.|+|+|++     ..++|+|.|++||+|..|+
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce   46 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence            35666889999999997     5689999999999999986

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.33  E-value=6.6e-05  Score=51.61  Aligned_cols=36  Identities=22%  Similarity=0.479  Sum_probs=30.6

Q ss_pred             cCCCCC---CCCCCCCeeccCC--CCceecCCCCCCCCCCCC
Q psy9424         143 RPACEG---ILCGRNALCTASD--HHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~---~~C~~~g~C~~~~--~~~~C~C~~Gf~g~~c~~  179 (535)
                      +++|.+   +||.+ |+|++..  ++|+|.|++||+|..|++
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence            677877   89998 8999754  679999999999999874

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.30  E-value=0.00014  Score=74.07  Aligned_cols=88  Identities=17%  Similarity=0.369  Sum_probs=31.8

Q ss_pred             ceeeecCCCeeeeCCCCCcCCCCCCCCcc----CCCCCCcccCC--CCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCC
Q psy9424         380 SLCNVLTHRKVCFCPRGFTGDPETECVRI----TCLSHADCYPG--GGSLCLANLCTRGCSADTDCPAALSCRSAECVDP  453 (535)
Q Consensus       380 ~~C~~~~g~~~C~C~~G~~g~~~~~C~~~----~C~~~~~C~~~--~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~  453 (535)
                      +.|....+.++|.|+.+|+|..++.|.+.    |+.++..+...  ....|.+  |.-+.       .+..|...     
T Consensus       304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~p--C~Cn~-------~g~~CD~~-----  369 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIP--SISSI-------GTNVCDNE-----  369 (426)
T ss_dssp             SCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCC--CCC----------------------
T ss_pred             hhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccC--CCCCC-------CcCccccC-----
Confidence            46888778899999999999999888754    55554332111  1234542  11111       24455433     


Q ss_pred             CCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         454 CSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       454 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                        ..+|.|+++|.+..   +|+|++||+|..|+
T Consensus       370 --t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce  397 (426)
T 3zyj_B          370 --LLHCQNGGTCHNNV---RCLCPAAYTGILCE  397 (426)
T ss_dssp             ---------------------------------
T ss_pred             --cccCCCCCCcCCCC---CCcCCCCCcCCCCc
Confidence              46899999998765   89999999999986

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.20  E-value=3.8e-05  Score=54.39  Aligned_cols=41  Identities=17%  Similarity=0.261  Sum_probs=32.4

Q ss_pred             CCccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeee----cCCCceeeCCCCCcCCCCC
Q psy9424          13 QHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAV----VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        13 ~~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~----~~~~~~C~C~~Gf~G~~c~   68 (535)
                      .+|.|++||+               .++|.++|+|++    ..++|+|+|++||+|..|+
T Consensus         3 ~~C~C~~g~~---------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A            3 PTYKCPETFD---------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             CCBCCCHHHH---------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             eeeECCCCCc---------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            4688888886               146888999997    3457999999999999543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.11  E-value=7.4e-05  Score=78.34  Aligned_cols=43  Identities=30%  Similarity=0.762  Sum_probs=29.4

Q ss_pred             CccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCC
Q psy9424         130 EQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPG  177 (535)
Q Consensus       130 ~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c  177 (535)
                      ..|..+|.|..+.+++|.. +|.+ ++|++.   ++|.|++||+|..|
T Consensus       379 ~~C~~~~~g~~c~~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C  421 (463)
T 2wg3_C          379 EECRATVQPAQTLTSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFC  421 (463)
T ss_dssp             GGGCCCCCCCCCCCCHHHH-HCCS-EEECTT---SCEEECTTEESTTS
T ss_pred             ccCCCCCcCCCCccccccC-CCCC-CccCCC---CeECCCCCcCCCcC
Confidence            4666777777666677764 5764 677753   47888888887774

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.08  E-value=0.00012  Score=54.16  Aligned_cols=36  Identities=22%  Similarity=0.564  Sum_probs=31.2

Q ss_pred             CCCCCCCCCCCCeecc-----CCCCceecCCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTA-----SDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~-----~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      ++|.++||.++|+|++     ..++|+|.|++||+|..|++
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~   47 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence            5677789999999996     56789999999999999863

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.96  E-value=0.0002  Score=50.83  Aligned_cols=31  Identities=23%  Similarity=0.478  Sum_probs=28.0

Q ss_pred             CCCCCCCCeee--eCCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCS--VANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~  486 (535)
                      .+||.|+|+|+  +..++|.|.|++||+|..|+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence            67899999998  56788999999999999986

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.89  E-value=0.00026  Score=50.16  Aligned_cols=31  Identities=26%  Similarity=0.568  Sum_probs=26.7

Q ss_pred             CCCCCCCCeee--ecCCCceeeCCCCCcCCCCC
Q psy9424          38 DEVCGRNAECA--VVNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        38 ~~~C~~~g~C~--~~~~~~~C~C~~Gf~G~~c~   68 (535)
                      .++|.++|+|+  +..++|+|+|++||+|..|.
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence            57899999998  56678999999999999553

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.81  E-value=0.00039  Score=49.77  Aligned_cols=45  Identities=18%  Similarity=0.449  Sum_probs=33.8

Q ss_pred             CCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcccc
Q psy9424          33 NPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCIS   90 (535)
Q Consensus        33 d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~   90 (535)
                      |+|.. .+.|.+  .|+++.++|+|.|++||+..           .+...|.++++|.-
T Consensus         2 dEC~~~~~~C~~--~C~nt~Gsy~C~C~~Gy~L~-----------~d~~~C~didec~c   47 (55)
T 2jkh_L            2 KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLA-----------DNGKACIPTGPYPC   47 (55)
T ss_dssp             CCTTTGGGGCSS--EEEEETTEEEEECCTTEEEC-----------TTSSCEEESSSSCT
T ss_pred             ccccCCCCCcCc--EeEcCCCCeEEeCCCCCEEC-----------CCCCeeccCccccC
Confidence            57764 456864  89999999999999999865           23456777777643

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=96.74  E-value=0.00055  Score=69.77  Aligned_cols=29  Identities=21%  Similarity=0.577  Sum_probs=23.3

Q ss_pred             CCCC-CeeccCCCCceecCCCCCCCCCCCC
Q psy9424         151 CGRN-ALCTASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       151 C~~~-g~C~~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      |..+ ..|....+.+.|.|+.+++|..|+.
T Consensus       299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~  328 (426)
T 3zyj_B          299 CNLHATVCVYDNSKLTCECEHNTTGPDCGK  328 (426)
T ss_dssp             CSSSCSCEEEETTEEEECCCTTEESSSSCE
T ss_pred             CCCchhhcCCCCCCceeeCCCCCcCCCccc
Confidence            5545 4688776778999999999999874

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.58  E-value=0.00068  Score=47.82  Aligned_cols=31  Identities=26%  Similarity=0.459  Sum_probs=26.6

Q ss_pred             CCCCCCCCeeee----CCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSV----ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~----~~g~~~C~C~~G~~G~~c~  486 (535)
                      .+||.|+|+|++    ..++|+|.|++||+|..|+
T Consensus        13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            457999999996    3467999999999999886

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.56  E-value=0.0015  Score=46.15  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=27.9

Q ss_pred             cCCCCCCC---------CCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          31 CRNPCEAD---------EVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        31 ~~d~C~~~---------~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      .||+|...         .+|.  ++|+++.++|+|.|++||++.
T Consensus         3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~   44 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQ   44 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred             ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeEC
Confidence            38899752         6786  489999999999999999976

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.55  E-value=0.0013  Score=46.36  Aligned_cols=39  Identities=31%  Similarity=0.584  Sum_probs=30.5

Q ss_pred             eeCCcCCC----------CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424         278 HLIDFCAA----------KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC  318 (535)
Q Consensus       278 ~~~~~C~~----------~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C  318 (535)
                      ++|++|..          .+|.  ++|++++|+|+|.|++||++....++|
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~~~C   50 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQEDRHSC   50 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECTTSSCE
T ss_pred             CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECCCCCcc
Confidence            35778864          4675  499999999999999999987655544

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.52  E-value=0.0018  Score=48.90  Aligned_cols=30  Identities=17%  Similarity=0.226  Sum_probs=24.1

Q ss_pred             CCCCCCCceeeecCCCeeee-CCCCCcCCCC
Q psy9424         373 QGACGVNSLCNVLTHRKVCF-CPRGFTGDPE  402 (535)
Q Consensus       373 ~~~C~~~~~C~~~~g~~~C~-C~~G~~g~~~  402 (535)
                      ...|..+++|+|+.|+|+|. +..||++...
T Consensus        10 ~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~   40 (71)
T 2kl7_A           10 PEACKGEMKCINHYGGYLCLPRSAAVINDLH   40 (71)
T ss_dssp             CCSCTTEEEEEETTCCEEEEETTSCCCSCCS
T ss_pred             CCCCCCCCEeECCCCCeEecccCCccccccc
Confidence            35677788999999999998 4578987653

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.46  E-value=0.001  Score=47.54  Aligned_cols=43  Identities=21%  Similarity=0.586  Sum_probs=34.0

Q ss_pred             CcCCC--CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9424         281 DFCAA--KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCT  325 (535)
Q Consensus       281 ~~C~~--~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~  325 (535)
                      ++|..  .+|.  ..|++++|+|+|.|++||......++|+++++|.
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            45543  3464  3899999999999999999877777788888874

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.24  E-value=0.0021  Score=48.48  Aligned_cols=35  Identities=23%  Similarity=0.350  Sum_probs=29.6

Q ss_pred             cCCCCCC-CCCCCCCCeeeecCCCceee-CCCCCcCC
Q psy9424          31 CRNPCEA-DEVCGRNAECAVVNHTPRCT-CVAGTVGD   65 (535)
Q Consensus        31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~-C~~Gf~G~   65 (535)
                      +||||.. .++|.++++|+++.++|+|. +..||.++
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~   38 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND   38 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence            3899985 57899889999999999998 45788765

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.08  E-value=0.0022  Score=48.07  Aligned_cols=46  Identities=20%  Similarity=0.446  Sum_probs=37.0

Q ss_pred             eeCCcCCCC--CCCCCCeeecCCC-CeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9424         278 HLIDFCAAK--PCGPGARCDNSRG-SYKCLCPLGLVGDPYGAGCVSASQCT  325 (535)
Q Consensus       278 ~~~~~C~~~--~C~~~~~C~~~~g-~~~C~C~~Gy~g~~c~~~C~~~~~C~  325 (535)
                      .++++|...  .|.  ..|+++++ +|+|.|++||......++|.++++|.
T Consensus         3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            467888653  354  38999998 89999999999888888898888874

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.06  E-value=0.0055  Score=48.65  Aligned_cols=64  Identities=20%  Similarity=0.489  Sum_probs=51.6

Q ss_pred             CCCCCCCcccc-CCCCeeeeCCCCCccCCCCCCeeC--CcCCCCC--CCCCCeeecCC-----CCeeeeCCCCCc
Q psy9424         246 NPCGPNALCSA-EKHKQICYCQPGYTGDAYFGCHLI--DFCAAKP--CGPGARCDNSR-----GSYKCLCPLGLV  310 (535)
Q Consensus       246 ~~C~~~~~C~~-~~g~~~C~C~~G~~G~~~~~C~~~--~~C~~~~--C~~~~~C~~~~-----g~~~C~C~~Gy~  310 (535)
                      ..|..++.|.. .++...|+|.+||.++.. .|..+  ..|+.+.  |..+|.|....     +...|.|.+||.
T Consensus        10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           10 KQCPQNSGCFRHLDEREECKCLLNYKQEGD-KCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCCTTEEEECCTTSCCEEEECTTEEEETT-EEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCCCeEEcCCCCEEEEecCCeecCCC-eEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            45778899977 468889999999998765 58876  5787643  89999998775     678999999975

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.93  E-value=0.002  Score=46.46  Aligned_cols=29  Identities=28%  Similarity=0.528  Sum_probs=25.3

Q ss_pred             CCCCCCeeee----CCCCceeeCCCCCcCCCCC
Q psy9424         458 PCGPNAQCSV----ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       458 ~C~~~~~C~~----~~g~~~C~C~~G~~G~~c~  486 (535)
                      +|.|+|+|+.    ..++|.|.|++||+|..|+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence            8999999983    3457899999999999987

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=95.92  E-value=0.003  Score=47.35  Aligned_cols=45  Identities=16%  Similarity=0.305  Sum_probs=35.1

Q ss_pred             CCCCCC-CCCCCCCCeeeecCC-CceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy9424          32 RNPCEA-DEVCGRNAECAVVNH-TPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCI   89 (535)
Q Consensus        32 ~d~C~~-~~~C~~~g~C~~~~~-~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~   89 (535)
                      +|+|.. .+.|+.  .|+++.+ +|+|.|++||...           .+...|.++++|.
T Consensus         5 ~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~-----------~D~~tC~d~dec~   51 (69)
T 1kli_L            5 QLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLL-----------ADGVSCTPTVEYP   51 (69)
T ss_dssp             CCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEEC-----------TTSSCEEECSSSC
T ss_pred             cccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeEC-----------CCCCcccCccccc
Confidence            889975 567875  6999998 8999999999865           3346677777764

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.85  E-value=0.0017  Score=57.48  Aligned_cols=36  Identities=22%  Similarity=0.551  Sum_probs=33.0

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +++|.+.+|.++++|++..++|+|.|++||.|..|+
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce  154 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE  154 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc
Confidence            567778899999999999999999999999999887

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=95.77  E-value=0.016  Score=46.25  Aligned_cols=64  Identities=20%  Similarity=0.405  Sum_probs=52.3

Q ss_pred             CCCCCCCcccc-CCCCeeeeCCCCCccCCCCCCeeCCc-CCCCC--CCCCCeeecCC-CCeeeeCCCCCc
Q psy9424         246 NPCGPNALCSA-EKHKQICYCQPGYTGDAYFGCHLIDF-CAAKP--CGPGARCDNSR-GSYKCLCPLGLV  310 (535)
Q Consensus       246 ~~C~~~~~C~~-~~g~~~C~C~~G~~G~~~~~C~~~~~-C~~~~--C~~~~~C~~~~-g~~~C~C~~Gy~  310 (535)
                      ..|..++.|.. .+|...|+|.+||.++.. .|..+++ |..+.  |..++.|+... ....|.|..+|.
T Consensus        16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           16 TNVPENAACYRYLDGTEEWRCLLGFKEVGG-KCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             SCCCTTEEEEECTTSCEEEEECTTEEECSS-SEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             CCCCCCCCeEECCCCCEeEEEECCeeccCC-EEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            35778899987 668889999999998865 5888887 65533  99999999885 788999999974

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=95.74  E-value=0.005  Score=48.91  Aligned_cols=71  Identities=25%  Similarity=0.576  Sum_probs=49.9

Q ss_pred             CCCCCCCCCCeecc-CCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q psy9424         146 CEGILCGRNALCTA-SDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSH  224 (535)
Q Consensus       146 C~~~~C~~~g~C~~-~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~  224 (535)
                      |....|+.++.|.. ..+..+|+|.+||.++.                                     ..|....   .
T Consensus         7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg-------------------------------------~~Cv~~~---~   46 (99)
T 1ob1_C            7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEG-------------------------------------DKCVENP---N   46 (99)
T ss_dssp             CCSCCCCTTEEEECCTTSCCEEEECTTEEEET-------------------------------------TEEEECS---C
T ss_pred             eccCCCCCCCCeEEcCCCCEEEEecCCeecCC-------------------------------------CeEeeCC---C
Confidence            44456888999987 45889999999999987                                     3343320   0


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCCCCCCccccCC-----CCeeeeCCCCCc
Q psy9424         225 ADCSGDKVCEDHRCKISCLANNPCGPNALCSAEK-----HKQICYCQPGYT  270 (535)
Q Consensus       225 ~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~-----g~~~C~C~~G~~  270 (535)
                      ..|...              ...|..+|.|+...     +...|.|.+||+
T Consensus        47 ~sC~~n--------------NGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           47 PTCNEN--------------NGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCSTTG--------------GGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CChhhc--------------CCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            223211              36688899998764     568999999976

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=95.49  E-value=0.0015  Score=62.68  Aligned_cols=36  Identities=28%  Similarity=0.586  Sum_probs=30.4

Q ss_pred             cCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424          31 CRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDP   66 (535)
Q Consensus        31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~   66 (535)
                      ++|||.. .++|..++.|+++.++|.|.|++||+|+.
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG   40 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG   40 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred             cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC
Confidence            4899975 67899999999999999999999999884

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=95.37  E-value=0.0056  Score=42.85  Aligned_cols=32  Identities=28%  Similarity=0.589  Sum_probs=28.5

Q ss_pred             eeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424         293 RCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC  324 (535)
Q Consensus       293 ~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C  324 (535)
                      .|++++++|+|.|++||......++|++++++
T Consensus        11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L           11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            78999999999999999988777888888876

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=95.36  E-value=0.017  Score=48.45  Aligned_cols=56  Identities=13%  Similarity=0.200  Sum_probs=37.9

Q ss_pred             CCCCCCeeccCC--CCc-eecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424         150 LCGRNALCTASD--HHA-TCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHS  207 (535)
Q Consensus       150 ~C~~~g~C~~~~--~~~-~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~  207 (535)
                      ||.++|+|++..  .+| .|.|++||+|..|++....+|.+.  ....+...++.++.|..
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g--~G~~YrG~~~~t~sG~~   60 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG--NGHFYRGKASTDTMGRP   60 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS--SCTTCCSCCCBBTTSCB
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc--ccccceeeccccccCCc
Confidence            688899998874  556 999999999999997665566542  11223334455555533

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=95.32  E-value=0.014  Score=46.56  Aligned_cols=70  Identities=23%  Similarity=0.453  Sum_probs=51.1

Q ss_pred             CCCCCCCCCCCeecc-CCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q psy9424         145 ACEGILCGRNALCTA-SDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNS  223 (535)
Q Consensus       145 ~C~~~~C~~~g~C~~-~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~  223 (535)
                      .|....|+.++.|.. .+|..+|+|..||.++.                                     ..|...    
T Consensus        12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg-------------------------------------~~Cv~~----   50 (105)
T 1n1i_A           12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVG-------------------------------------GKCVPA----   50 (105)
T ss_dssp             SCCSSCCCTTEEEEECTTSCEEEEECTTEEECS-------------------------------------SSEEEC----
T ss_pred             EecCCCCCCCCCeEECCCCCEeEEEECCeeccC-------------------------------------CEEEEC----
Confidence            454456788999998 66889999999999987                                     223322    


Q ss_pred             CCC-CCCCCcccCCCcccCCCCCCCCCCCCccccCC-CCeeeeCCCCCc
Q psy9424         224 HAD-CSGDKVCEDHRCKISCLANNPCGPNALCSAEK-HKQICYCQPGYT  270 (535)
Q Consensus       224 ~~~-C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~-g~~~C~C~~G~~  270 (535)
                       +. |..              ....|..+|.|..+. ....|.|.++|+
T Consensus        51 -Np~C~~--------------nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           51 -SITCEE--------------NNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             -CCCTTS--------------GGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             -Ccchhh--------------cCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence             22 321              136688999998875 678999999975

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=95.24  E-value=0.0035  Score=60.20  Aligned_cols=40  Identities=25%  Similarity=0.533  Sum_probs=32.9

Q ss_pred             cCCCC--CCCCCCCCeeeeCCCCceeeCCCCCcCCCCCCCccccC
Q psy9424         451 VDPCS--PAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRT  493 (535)
Q Consensus       451 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~C~~~  493 (535)
                      +|||.  .++|+.++.|+|+.|+|.|.|++||.|++-   .|.++
T Consensus         5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~---~C~d~   46 (285)
T 1gl4_A            5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR---QCVAE   46 (285)
T ss_dssp             --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS---SEEET
T ss_pred             chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC---cCCCC
Confidence            89997  789999999999999999999999998763   36544

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=95.16  E-value=0.0057  Score=42.78  Aligned_cols=38  Identities=24%  Similarity=0.598  Sum_probs=28.3

Q ss_pred             CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy9424          38 DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQC   88 (535)
Q Consensus        38 ~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C   88 (535)
                      .+.|.+  .|+++.++|+|.|++||+..           .+...|.+++++
T Consensus         5 ng~C~~--~C~n~~gs~~C~C~~Gy~L~-----------~d~~tC~dide~   42 (51)
T 1kig_L            5 NGGCDQ--FCREERSEVRCSCAHGYVLG-----------DDSKSCVSTERF   42 (51)
T ss_dssp             TTSSSS--CCCEETTEECCCCCTTEEEC-----------TTSSCEEECSSS
T ss_pred             CCCcCC--EeEcCCCCeEEeCCCCcEEC-----------CCCCccccCCcc
Confidence            345654  59999999999999999865           234567777664

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.14  E-value=0.0058  Score=44.02  Aligned_cols=29  Identities=24%  Similarity=0.456  Sum_probs=24.1

Q ss_pred             CCCCCCeeee----cCCCceeeCCCCCcCCCCC
Q psy9424          40 VCGRNAECAV----VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        40 ~C~~~g~C~~----~~~~~~C~C~~Gf~G~~c~   68 (535)
                      +|.++|+|+.    ....|.|.|++||+|..|+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence            8999999983    3447899999999999654

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=94.80  E-value=0.0097  Score=63.35  Aligned_cols=36  Identities=31%  Similarity=0.701  Sum_probs=33.8

Q ss_pred             cCCCCCCCCCCCCeeee-CCCCceeeCC-CCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSV-ANHRPLCSCP-AGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~c~  486 (535)
                      +|+|.++||.|+|+|++ ..++|.|.|+ +||+|..|+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence            67888999999999999 8899999999 999999997

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=94.65  E-value=0.014  Score=62.20  Aligned_cols=36  Identities=25%  Similarity=0.747  Sum_probs=32.5

Q ss_pred             cCCCCCCCCCCCCeeee-CCCCceeeCC-CCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSV-ANHRPLCSCP-AGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~c~  486 (535)
                      +|+|.++||.|+|+|++ ..++|.|.|+ +||+|..|+
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence            57898999999999996 4588999999 999999997

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=94.64  E-value=0.0093  Score=52.65  Aligned_cols=38  Identities=21%  Similarity=0.551  Sum_probs=30.0

Q ss_pred             CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC
Q psy9424         245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA  285 (535)
Q Consensus       245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~  285 (535)
                      +.+|.++++|++..++|+|.|++||+|.   .|+.+++|.+
T Consensus       124 ~~~C~~~g~C~~~~~~~~c~C~~g~~G~---~Ce~~~~c~~  161 (162)
T 1g1s_A          124 DMSCSKQGECLETIGNYTCSCYPGFYGP---ECEYVRDDDD  161 (162)
T ss_dssp             TTGGGGSEEEEECSSSEEEEECTTEEST---TSCEECC---
T ss_pred             CCCCCCCCEEecCCCCceEeCCCCCcCc---ccccCcccCC
Confidence            4678888899999899999999999998   6777777753

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=94.47  E-value=0.013  Score=41.31  Aligned_cols=33  Identities=21%  Similarity=0.491  Sum_probs=28.7

Q ss_pred             eeecCCC-CeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9424         293 RCDNSRG-SYKCLCPLGLVGDPYGAGCVSASQCT  325 (535)
Q Consensus       293 ~C~~~~g-~~~C~C~~Gy~g~~c~~~C~~~~~C~  325 (535)
                      .|+++.+ +|+|.|++||......++|+++++|.
T Consensus        12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L           12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence            7999888 79999999999888788888888873

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.25  E-value=0.042  Score=46.11  Aligned_cols=57  Identities=23%  Similarity=0.519  Sum_probs=39.3

Q ss_pred             CCCCCCccccCC--CCe-eeeCCCCCccCCCCCCee-CCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424         247 PCGPNALCSAEK--HKQ-ICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       247 ~C~~~~~C~~~~--g~~-~C~C~~G~~G~~~~~C~~-~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~  315 (535)
                      +|.++++|++..  .+| +|.|++||+|.   .|+. ++    .+|..+     ....|++.+..++.|..|+
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~---~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEEST---TSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCc---cccccCc----CCCccc-----ccccceeeccccccCCccc
Confidence            688999998874  555 99999999999   5543 32    123221     1235788888888887665

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=93.82  E-value=0.02  Score=60.86  Aligned_cols=37  Identities=22%  Similarity=0.524  Sum_probs=34.4

Q ss_pred             cCCCCCCCCCCCCeecc-CCCCceecCC-CCCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTA-SDHHATCSCK-PGYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~Gf~g~~c~~  179 (535)
                      +|+|.++||.++|+|++ ..++|+|.|. +||+|..||+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence            57898999999999999 8899999999 9999999985

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=93.78  E-value=0.021  Score=40.19  Aligned_cols=38  Identities=16%  Similarity=0.296  Sum_probs=28.5

Q ss_pred             CCCCCCCeeeecCC-CceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy9424          39 EVCGRNAECAVVNH-TPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCI   89 (535)
Q Consensus        39 ~~C~~~g~C~~~~~-~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~   89 (535)
                      +.|++  .|+++.+ +|+|.|++||+..           .+...|.++++|.
T Consensus         7 ggC~~--~C~n~~ggs~~C~C~~Gy~L~-----------~Dg~tC~d~dec~   45 (53)
T 2bz6_L            7 GGCEQ--YCSDHTGTKRSCRCHEGYSLL-----------ADGVSCTPTVEYP   45 (53)
T ss_dssp             GGCSS--EEEEETTTEEEEECCTTEEEC-----------TTSSCEEECSSSC
T ss_pred             CCcCC--EeEcCCCCCEEeeCCCCCEEC-----------CCCCcccCCcccc
Confidence            34654  6999988 7999999999865           2346677777763

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=93.66  E-value=0.024  Score=50.07  Aligned_cols=36  Identities=22%  Similarity=0.609  Sum_probs=32.0

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +..|.+.+|.++++|++..++|.|.|++||.|..|+
T Consensus       119 ~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~  154 (164)
T 3cfw_A          119 TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ  154 (164)
T ss_dssp             ECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC
T ss_pred             cCCCCCCcCCCCCeecccCCCceeeeCCCccccccc
Confidence            455667889999999999999999999999999987

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.22  E-value=0.072  Score=36.83  Aligned_cols=35  Identities=29%  Similarity=0.706  Sum_probs=26.4

Q ss_pred             CCCCC--CCCCCCCCeeeec--CCCceeeCCCCCcCCCCC
Q psy9424          33 NPCEA--DEVCGRNAECAVV--NHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        33 d~C~~--~~~C~~~g~C~~~--~~~~~C~C~~Gf~G~~c~   68 (535)
                      .+|..  .+.|.++ +|+..  ...+.|.|++||+|.+|.
T Consensus         6 ~~C~~~~~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 3e50_C            6 NDCPDSHTQFCFHG-TCRFLVQEDKPACVCHSGYVGARCE   44 (50)
T ss_pred             cccChhhcCcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence            35554  5789875 99864  357899999999999653

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=93.19  E-value=0.035  Score=59.26  Aligned_cols=37  Identities=19%  Similarity=0.530  Sum_probs=33.0

Q ss_pred             cCCCCCCCCCCCCeecc-CCCCceecCC-CCCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTA-SDHHATCSCK-PGYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~Gf~g~~c~~  179 (535)
                      +++|.++||.++|+|++ ..++|.|.|+ +||+|..|++
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            47899999999999996 4588999999 9999999985

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=93.17  E-value=0.037  Score=38.40  Aligned_cols=36  Identities=25%  Similarity=0.636  Sum_probs=26.6

Q ss_pred             CCCCCC--CCCCCCCCeeee--cCCCceeeCCCCCcCCCCC
Q psy9424          32 RNPCEA--DEVCGRNAECAV--VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        32 ~d~C~~--~~~C~~~g~C~~--~~~~~~C~C~~Gf~G~~c~   68 (535)
                      ..+|..  .+.|.+ |+|+-  ..+.+.|+|++||+|.+|+
T Consensus         5 ~~~C~~~~~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A            5 FSRCPKQYKHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             CEECCGGGTTSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             ccccChhhcCcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence            345543  578888 89964  3456899999999999654

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.08  E-value=0.083  Score=36.52  Aligned_cols=30  Identities=23%  Similarity=0.635  Sum_probs=25.1

Q ss_pred             CCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~  486 (535)
                      .+.|.|+ +|...  .+.+.|.|++||+|..|+
T Consensus        13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 3e50_C           13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCE   44 (50)
T ss_pred             cCcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence            5678876 99864  467999999999999986

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=92.89  E-value=0.083  Score=36.55  Aligned_cols=36  Identities=28%  Similarity=0.620  Sum_probs=26.8

Q ss_pred             CCCCCC--CCCCCCCCeeee--cCCCceeeCCCCCcCCCCC
Q psy9424          32 RNPCEA--DEVCGRNAECAV--VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        32 ~d~C~~--~~~C~~~g~C~~--~~~~~~C~C~~Gf~G~~c~   68 (535)
                      .++|..  .+.|.+ |+|+-  ..+.+.|.|++||+|++|+
T Consensus         9 ~~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A            9 KNPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             CCTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred             CcccCchhhCcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence            456664  468886 69974  4457899999999999653

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=92.71  E-value=0.02  Score=61.68  Aligned_cols=54  Identities=17%  Similarity=0.321  Sum_probs=43.2

Q ss_pred             ccchhccCCCccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCC
Q psy9424           5 QVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus         5 ~~~~~~~~~~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~   68 (535)
                      .+.|-+.... .|.+||+|++|..   ...|.  ..|..||.|++.    +|+|.+||+|.+|.
T Consensus       511 rFRw~q~~~~-~C~~gw~g~dc~i---~~~Cp--~~C~ghG~C~~G----~C~Cd~G~~G~~C~  564 (725)
T 2e26_A          511 RFRWHQPAPF-DKQQTWAIDNVYI---GDGCL--DMCSGHGRCVQG----SCVCDEQWGGLYCD  564 (725)
T ss_dssp             EEEEEECSSC-CTTCCEEEEEEEE---ESCSS--GGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred             eEEeccccCC-ccCCCcccccccc---cCCCC--cccCCCcEECCC----CEeeCCCccCCCcC
Confidence            4567776653 8899999999993   24675  578899999975    89999999999765

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=92.02  E-value=0.059  Score=37.33  Aligned_cols=30  Identities=27%  Similarity=0.668  Sum_probs=24.5

Q ss_pred             CCCCCCCCeeee--CCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSV--ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~  486 (535)
                      .+.|.| |+|..  ..+.+.|.|++||+|..|+
T Consensus        13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A           13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TTSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             cCcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence            567888 79963  4567899999999999986

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=91.97  E-value=0.11  Score=35.94  Aligned_cols=30  Identities=17%  Similarity=0.381  Sum_probs=24.1

Q ss_pred             CCCCCCCCeeee--CCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSV--ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~  486 (535)
                      .+.|.+ |+|..  ..+.+.|.|++||+|..|+
T Consensus        17 ~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           17 QNFCIH-GECKYIEHLEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             GGTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred             hCcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence            467886 59974  3457899999999999986

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=91.88  E-value=0.074  Score=40.46  Aligned_cols=36  Identities=33%  Similarity=0.771  Sum_probs=26.1

Q ss_pred             CCCCCC--CCCCCCCCeeeec--CCCceeeCCCCCcCCCCC
Q psy9424          32 RNPCEA--DEVCGRNAECAVV--NHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        32 ~d~C~~--~~~C~~~g~C~~~--~~~~~C~C~~Gf~G~~c~   68 (535)
                      .++|..  .+.|.++ +|+..  .+.+.|.|.+||+|..|+
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence            567764  5789875 99543  357899999999999653

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=91.74  E-value=0.079  Score=46.61  Aligned_cols=33  Identities=24%  Similarity=0.626  Sum_probs=28.9

Q ss_pred             CCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424          33 NPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDP   66 (535)
Q Consensus        33 d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~   66 (535)
                      ..|. ..+|+++|+|.+...+|.|+|++||+|..
T Consensus       120 ~~~~-~~~C~~~g~C~~~~~~~~c~C~~g~~g~~  152 (164)
T 3cfw_A          120 ASCQ-PWSCSGHGECVEIINNYTCNCDVGYYGPQ  152 (164)
T ss_dssp             CCCC-TTSSCSSEEEEEETTEEEEEECTTCBSSS
T ss_pred             CCCC-CCcCCCCCeecccCCCceeeeCCCccccc
Confidence            3555 57899999999999999999999999984

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=91.48  E-value=0.052  Score=48.25  Aligned_cols=50  Identities=28%  Similarity=0.608  Sum_probs=37.2

Q ss_pred             CCCccCCCCCCeeCCcCCCCC-----CCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         267 PGYTGDAYFGCHLIDFCAAKP-----CGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       267 ~G~~G~~~~~C~~~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      +||.+..  .+.++++|...+     |..  .|++..++|.|.|++||++....++|++
T Consensus       113 ~Gf~~~~--~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          113 TGFEAFY--AAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             CEEEEEE--EEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cCceeee--eccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCcccc
Confidence            6777653  346788997643     654  8999999999999999997765555543

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=91.33  E-value=0.039  Score=48.15  Aligned_cols=36  Identities=22%  Similarity=0.651  Sum_probs=32.6

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +++|.+.||.+++.|.+...+|.|.|.+||+|+.|+
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce  154 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE  154 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             cCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence            566777899999999999999999999999999986

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=91.10  E-value=0.078  Score=40.32  Aligned_cols=35  Identities=29%  Similarity=0.610  Sum_probs=26.2

Q ss_pred             cCCCC---CCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCS---PAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~---~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~  486 (535)
                      .++|.   .+.|.|+ +|+..  .+.+.|.|++||+|..|+
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence            45555   6788886 99543  367899999999999986

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=91.08  E-value=0.17  Score=45.27  Aligned_cols=28  Identities=32%  Similarity=0.864  Sum_probs=24.3

Q ss_pred             CCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      ..+|.|+|.|+.   ..+|.|++||.|..|+
T Consensus       152 ~~~C~ngG~Cv~---P~~C~C~~Gw~G~~C~  179 (188)
T 2ygo_A          152 PGGCRNGGFCNE---RRICECPDGFHGPHCE  179 (188)
T ss_dssp             TTCCCTTCEECT---TSCEECCTTCBTTTTC
T ss_pred             CCCCCCCCEeCC---CCcccCcCCCCCCCCc
Confidence            578999999984   3489999999999986

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=90.59  E-value=0.058  Score=47.96  Aligned_cols=43  Identities=21%  Similarity=0.441  Sum_probs=33.8

Q ss_pred             CCCCCcccCcCCcCCCCCC-CC---CCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          19 PGLASAACVDGRCRNPCEA-DE---VCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        19 ~g~~g~~C~~~~~~d~C~~-~~---~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +||.+......  +++|.. ..   +|.+  .|+++.++|+|.|++||++.
T Consensus       113 ~Gf~~~~~~~d--i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~  159 (170)
T 1szb_A          113 TGFEAFYAAED--IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH  159 (170)
T ss_dssp             CEEEEEEEEEE--CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred             cCceeeeeccc--cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence            78887775432  889985 22   2876  79999999999999999855

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=90.49  E-value=0.044  Score=47.82  Aligned_cols=37  Identities=27%  Similarity=0.694  Sum_probs=33.0

Q ss_pred             cCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      +++|.+.||.+++.|.+....|.|.|.+||+|+.||+
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~  155 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ  155 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             cCCCCCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence            4677778999999999999999999999999999863

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=90.31  E-value=0.24  Score=35.51  Aligned_cols=30  Identities=27%  Similarity=0.429  Sum_probs=24.3

Q ss_pred             eeecCC-CCeeeeCCCCCccCCCCCCCCCCC
Q psy9424         293 RCDNSR-GSYKCLCPLGLVGDPYGAGCVSAS  322 (535)
Q Consensus       293 ~C~~~~-g~~~C~C~~Gy~g~~c~~~C~~~~  322 (535)
                      .|++++ ++|+|.|++||......++|++++
T Consensus        12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~   42 (59)
T 2wph_E           12 FCKNSADNKVVCSCTEGYRLAENQKSCEPAV   42 (59)
T ss_dssp             EEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred             EeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence            788888 599999999998877777777653

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=90.16  E-value=0.16  Score=45.30  Aligned_cols=38  Identities=21%  Similarity=0.426  Sum_probs=29.9

Q ss_pred             CCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCC
Q psy9424          22 ASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        22 ~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~   68 (535)
                      +.+.|..+    .|.  .+|.++|.|+..+   +|.|++||+|..|+
T Consensus       142 ~~K~C~~~----~C~--~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~  179 (188)
T 2ygo_A          142 FFKTCQQA----ECP--GGCRNGGFCNERR---ICECPDGFHGPHCE  179 (188)
T ss_dssp             EEEEECCC----CCT--TCCCTTCEECTTS---CEECCTTCBTTTTC
T ss_pred             ecccccCC----ccC--CCCCCCCEeCCCC---cccCcCCCCCCCCc
Confidence            36678754    665  6899999999754   89999999999654

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=88.89  E-value=0.38  Score=41.47  Aligned_cols=38  Identities=13%  Similarity=0.304  Sum_probs=29.7

Q ss_pred             CCCCCCeeccCC--CCc-eecCCCCCCCCCCCCCCCCCCCC
Q psy9424         150 LCGRNALCTASD--HHA-TCSCKPGYVGHPGPSMGTGPSSH  187 (535)
Q Consensus       150 ~C~~~g~C~~~~--~~~-~C~C~~Gf~g~~c~~~~~~~~~~  187 (535)
                      ||.++|+|+...  ..+ .|.|++||.|..|++....+|.+
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~~   54 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYE   54 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEEC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCCC
Confidence            789999998752  455 89999999999998765555543

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=87.34  E-value=0.4  Score=48.95  Aligned_cols=36  Identities=17%  Similarity=0.415  Sum_probs=33.0

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCC-CCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPA-GLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~-G~~G~~c~  486 (535)
                      .++|...||.++++|+...++|.|.|+. ||.|..|+
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~  221 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN  221 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence            5788889999999999999999999996 99999986

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=86.78  E-value=1.3  Score=44.80  Aligned_cols=28  Identities=25%  Similarity=0.605  Sum_probs=19.5

Q ss_pred             CCCCCe-eeecCC----CceeeCCCCCcCCCCC
Q psy9424          41 CGRNAE-CAVVNH----TPRCTCVAGTVGDPKY   68 (535)
Q Consensus        41 C~~~g~-C~~~~~----~~~C~C~~Gf~G~~c~   68 (535)
                      |.+|+. |.....    ..+|.|..+++|..|+
T Consensus       268 CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE  300 (403)
T 2y38_A          268 CHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD  300 (403)
T ss_dssp             CTTBCSCEEESCTTSTTCEEECCCTTEESSSCC
T ss_pred             cCCCccccCCCCCCCccceEeECcCcCcCCCCC
Confidence            666665 865321    3569999999999765

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=85.58  E-value=0.53  Score=33.68  Aligned_cols=30  Identities=20%  Similarity=0.528  Sum_probs=22.0

Q ss_pred             CeeeeCC-CCceeeCCCCCcCCCCCCCccccC
Q psy9424         463 AQCSVAN-HRPLCSCPAGLMGLPSANTACVRT  493 (535)
Q Consensus       463 ~~C~~~~-g~~~C~C~~G~~G~~c~~~~C~~~  493 (535)
                      ..|++++ ++|+|.|++||....- ...|.++
T Consensus        11 ~~C~n~~~gs~~C~C~~Gy~L~~D-~~tC~d~   41 (59)
T 2wph_E           11 QFCKNSADNKVVCSCTEGYRLAEN-QKSCEPA   41 (59)
T ss_dssp             SEEEECSTTCEEEECCTTEEECTT-SSCEEES
T ss_pred             CEeEeCCCCCEEeeCCCCcEECCC-CCcccCC
Confidence            4699998 6999999999986542 2345544

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=84.80  E-value=0.87  Score=45.70  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=20.7

Q ss_pred             CCCCCeec--cCCCCceecCCCCCCCCCCCC
Q psy9424         151 CGRNALCT--ASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       151 C~~~g~C~--~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      |..++.+.  +..+.+.|.|++||.|..|+.
T Consensus       257 Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~  287 (375)
T 4aqt_A          257 CNGHASECVKNEFDKLMCNCKHNTYGVDCEK  287 (375)
T ss_dssp             CTTSCSCEEECTTSCEEECCCTTEESTTSCE
T ss_pred             CCCCCcccCCCCCCCeeeeCcCCCcCCCccc
Confidence            55555432  334567899999999999874

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=84.23  E-value=0.64  Score=40.01  Aligned_cols=31  Identities=19%  Similarity=0.426  Sum_probs=26.0

Q ss_pred             CCCCCCCeeeeC--CCCc-eeeCCCCCcCCCCCC
Q psy9424         457 APCGPNAQCSVA--NHRP-LCSCPAGLMGLPSAN  487 (535)
Q Consensus       457 ~~C~~~~~C~~~--~g~~-~C~C~~G~~G~~c~~  487 (535)
                      .||.|+|+|+..  ...| +|.|++||.|..|++
T Consensus        13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei   46 (145)
T 2i9a_A           13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   46 (145)
T ss_dssp             CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred             CCCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence            389999999875  3456 899999999999984

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=82.91  E-value=0.63  Score=47.42  Aligned_cols=36  Identities=17%  Similarity=0.477  Sum_probs=32.7

Q ss_pred             cCCCCCCCCCCCCeeccCCCCceecCCC-CCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTASDHHATCSCKP-GYVGHPGP  178 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~-Gf~g~~c~  178 (535)
                      .+.|..+||.++++|++..++|.|.|+. ||.|..|+
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~  221 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN  221 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence            4688889999999999999999999996 99999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	535
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.65
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.59
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.58
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.51
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.51
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.5
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.5
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.49
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.45
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.42
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.36
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.33
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.16
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.14
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.0
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.99
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.98
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.98
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.97
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.9
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.82
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.82
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.81
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.81
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.78
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.71
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.64
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.64
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.63
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.56
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.54
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.52
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.52
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.41
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.36
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.33
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.29
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.29
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.22
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.21
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.17
d1szba2	45	Mannose-binding protein associated serine protease	97.1
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.05
d1szba2	45	Mannose-binding protein associated serine protease	97.05
d1nt0a3	45	Mannose-binding protein associated serine protease	97.01
d1nt0a3	45	Mannose-binding protein associated serine protease	97.0
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.94
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.94
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.44
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	96.42
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.4
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.04
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	95.91
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	95.82
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	95.5
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.22
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.03
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.86
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.77
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.71
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.22
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	92.89
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	92.7
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	92.26
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	92.14
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	91.34
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	90.39
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	90.37
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	90.07
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	88.36
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	88.3
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	87.81
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	86.8
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	86.01
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	85.89
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	84.91
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	81.89
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	81.33

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=8.7e-09  Score=66.47  Aligned_cols=36  Identities=28%  Similarity=0.609  Sum_probs=34.4

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      ||+|+++||.|+|+|++..++|+|+|++||+|..|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCe
Confidence            689999999999999999999999999999999986

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.8e-08  Score=65.10  Aligned_cols=36  Identities=28%  Similarity=0.592  Sum_probs=34.6

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +|+|.++||.++|+|++..++|+|.|++||+|..|+
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             cccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            899999999999999999999999999999999985

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.7e-08  Score=66.53  Aligned_cols=36  Identities=31%  Similarity=0.623  Sum_probs=34.0

Q ss_pred             cCCCC--CCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCS--PAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      ||||+  ++||.++|+|+++.++|+|.|++||+|..|+
T Consensus         3 ideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC
T ss_pred             CccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCCc
Confidence            89998  7899999999999999999999999999885

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.51  E-value=1.4e-08  Score=64.67  Aligned_cols=36  Identities=22%  Similarity=0.576  Sum_probs=34.0

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +|+|.++||.++|+|++..++|+|+|++||+|..|+
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            789999999999999999999999999999999874

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.6e-08  Score=64.96  Aligned_cols=37  Identities=19%  Similarity=0.471  Sum_probs=33.9

Q ss_pred             cCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCCC
Q psy9424          31 CRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDPK   67 (535)
Q Consensus        31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c   67 (535)
                      +||+|.. .++|.++|+|+++.++|+|.|++||+|..|
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~C   39 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRC   39 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTS
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCC
Confidence            4999986 689999999999999999999999999954

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.9e-08  Score=61.82  Aligned_cols=35  Identities=31%  Similarity=0.751  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      |+|.++||.|+|+|++..++|+|+|++||+|..|+
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            57889999999999999999999999999999874

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.6e-08  Score=64.15  Aligned_cols=37  Identities=27%  Similarity=0.532  Sum_probs=34.5

Q ss_pred             cCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      ||+|+++||.++|+|++..++|+|.|++||+|..||+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCee
Confidence            6899999999999999999999999999999999863

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3.8e-08  Score=63.48  Aligned_cols=37  Identities=22%  Similarity=0.425  Sum_probs=34.8

Q ss_pred             ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      ++|+|+++||.++|+|++..++|+|.|++||+|..||
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            4789999999999999999999999999999999976

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.2e-08  Score=62.73  Aligned_cols=35  Identities=26%  Similarity=0.673  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      |+|.++||.|+|+|++..++|+|.|++||+|..|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCe
Confidence            67889999999999999999999999999999986

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.42  E-value=3.2e-08  Score=63.03  Aligned_cols=36  Identities=19%  Similarity=0.505  Sum_probs=33.8

Q ss_pred             cCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      +|+|+++||.++|+|++..++|+|+|++||+|..||
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            789999999999999999999999999999999864

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=9.5e-08  Score=61.47  Aligned_cols=36  Identities=25%  Similarity=0.550  Sum_probs=33.5

Q ss_pred             CCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      |+|+++||.++|+|++..++|+|.|++||+|..||+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei   36 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL   36 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTTTCE
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCeE
Confidence            578899999999999999999999999999999874

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.4e-07  Score=59.18  Aligned_cols=35  Identities=26%  Similarity=0.619  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      |+|.++||.++|+|++..++|+|.|++||+|..||
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            57888999999999999999999999999999864

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.7e-07  Score=60.30  Aligned_cols=35  Identities=23%  Similarity=0.670  Sum_probs=32.6

Q ss_pred             CCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +.|.++||.|+|+|++..++|+|.|++||+|..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcC
Confidence            56779999999999999999999999999999986

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=3e-07  Score=59.50  Aligned_cols=35  Identities=23%  Similarity=0.567  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +.|.++||.|+|+|++..++|+|.|++||+|..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCCCC
Confidence            56778999999999999999999999999999986

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.00  E-value=8.6e-07  Score=57.95  Aligned_cols=36  Identities=31%  Similarity=0.664  Sum_probs=32.4

Q ss_pred             cCCCCCCCCCCCCeeeeC-CCCceeeCCC-CCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVA-NHRPLCSCPA-GLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~-~g~~~C~C~~-G~~G~~c~  486 (535)
                      ||+|.++||.|+|+|++. .++|+|.|++ ||+|..|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcC
Confidence            788999999999999875 6889999986 99999986

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.7e-06  Score=58.04  Aligned_cols=35  Identities=26%  Similarity=0.547  Sum_probs=32.8

Q ss_pred             cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      +++|.++||.+ |+|++..++|+|.|++||+|..|+
T Consensus         8 ~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCSSCCCEEECTTEESTTSC
T ss_pred             CCcccCCCCCC-CEEECCCCCCeEeCCCCCcCCCcc
Confidence            78999999987 899999999999999999999986

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.4e-06  Score=57.23  Aligned_cols=38  Identities=29%  Similarity=0.625  Sum_probs=33.1

Q ss_pred             CCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCC
Q psy9424         276 GCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDP  313 (535)
Q Consensus       276 ~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~  313 (535)
                      +|.+|+||+..++..+++|+|++|+|+|.|++||+++.
T Consensus         1 sCvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESS
T ss_pred             CCcceeccCCcCCCCCCEeECCCCCeEeECCCCcccCC
Confidence            37899999877766788999999999999999998753

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.9e-06  Score=55.11  Aligned_cols=33  Identities=30%  Similarity=0.703  Sum_probs=29.0

Q ss_pred             CCCCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424         454 CSPAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       454 C~~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~  486 (535)
                      |.++||.|+|+|++.  .++|+|+|++||+|..|+
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCCCCcC
Confidence            457899999999975  467999999999999997

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.3e-06  Score=57.41  Aligned_cols=37  Identities=22%  Similarity=0.461  Sum_probs=31.1

Q ss_pred             cCCCCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         445 CRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       445 C~~~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                      |.+   ||||+..++..+++|+|++|+|.|.|++||+++.
T Consensus         2 CvD---idEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           2 AVD---MDECKEPDVCKHGQCINTDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCC---CCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESS
T ss_pred             Ccc---eeccCCcCCCCCCEeECCCCCeEeECCCCcccCC
Confidence            555   9999855566688999999999999999998653

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=6.9e-07  Score=57.75  Aligned_cols=35  Identities=29%  Similarity=0.761  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      +.|.++||.++|+|++..++|+|.|++||+|..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCCCC
Confidence            46788999999999999999999999999999986

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=5.1e-07  Score=58.06  Aligned_cols=35  Identities=29%  Similarity=0.733  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGP  178 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~  178 (535)
                      +.|+++||.++|+|++..++|+|.|++||+|..||
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcC
Confidence            46888999999999999999999999999999976

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=2.9e-06  Score=55.08  Aligned_cols=35  Identities=26%  Similarity=0.768  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCeeeeC-CCCceeeCC-CCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVA-NHRPLCSCP-AGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~-~g~~~C~C~-~G~~G~~c~  486 (535)
                      |+|.++||.|+|+|++. .++|+|.|+ +||+|..|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcC
Confidence            67889999999999875 578999997 699999986

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.82  E-value=2.3e-06  Score=55.87  Aligned_cols=37  Identities=22%  Similarity=0.486  Sum_probs=32.4

Q ss_pred             cCCCCCCCCCCCCeeccC-CCCceecCCC-CCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCTAS-DHHATCSCKP-GYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~~~-~~~~~C~C~~-Gf~g~~c~~  179 (535)
                      +|+|.++||.++|+|++. .++|+|.|.. ||+|..|++
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            678999999999999875 5789999986 999999864

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=5.3e-06  Score=55.57  Aligned_cols=36  Identities=25%  Similarity=0.511  Sum_probs=31.9

Q ss_pred             cCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCC
Q psy9424          31 CRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        31 ~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~   68 (535)
                      -.|+|. .++|.+ |+|++..++|+|+|++||+|..|+
T Consensus         7 ~~~~C~-~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           7 LEHPCA-SLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             SCCSSS-STTTTS-EEECCCSSCCCEEECTTEESTTSC
T ss_pred             CCCccc-CCCCCC-CEEECCCCCCeEeCCCCCcCCCcc
Confidence            378998 799986 899999999999999999999654

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=4.1e-06  Score=55.07  Aligned_cols=33  Identities=30%  Similarity=0.648  Sum_probs=28.9

Q ss_pred             cCCCC--CCCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         451 VDPCS--PAPCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       451 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                      ||||+  +.+|. +++|+|+.|+|+|.|++||+++.
T Consensus         3 idEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           3 IDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             ccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            89998  55675 58999999999999999999875

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=2.4e-06  Score=55.86  Aligned_cols=33  Identities=21%  Similarity=0.537  Sum_probs=28.8

Q ss_pred             CCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          32 RNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        32 ~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      ||||+. ...|. +++|+++.|+|+|.|++||+..
T Consensus         2 idEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           2 IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   35 (42)
T ss_dssp             CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             ccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeEC
Confidence            788976 66775 6899999999999999999976

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=4e-06  Score=55.12  Aligned_cols=35  Identities=20%  Similarity=0.525  Sum_probs=30.2

Q ss_pred             cCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424          31 CRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDP   66 (535)
Q Consensus        31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~   66 (535)
                      +||||+. ...|. +++|+++.|+|+|.|++||+++.
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             cccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            4999987 56675 58999999999999999999873

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=6.5e-06  Score=54.07  Aligned_cols=41  Identities=32%  Similarity=0.643  Sum_probs=32.3

Q ss_pred             eCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCC
Q psy9424         279 LIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCV  319 (535)
Q Consensus       279 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~  319 (535)
                      +|+||+..+...+++|++++|+|+|.|++||.+....+.|+
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~   42 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV   42 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred             CccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCccc
Confidence            68999764433467999999999999999999876655443

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=7.8e-06  Score=53.68  Aligned_cols=34  Identities=18%  Similarity=0.329  Sum_probs=28.5

Q ss_pred             cCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          31 CRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        31 ~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +||||+....+. +++|+++.|+|+|.|++||+..
T Consensus         2 DidEC~~~~~~c-~~~C~Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELN   35 (43)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEEC
T ss_pred             CccccCCCCcCc-CCEeECCCCCEEEecCCCCEEC
Confidence            389998644443 5799999999999999999876

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=8.9e-06  Score=52.66  Aligned_cols=36  Identities=19%  Similarity=0.561  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCCCeeccC-CCCceecCC-CCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTAS-DHHATCSCK-PGYVGHPGPS  179 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~-~~~~~C~C~-~Gf~g~~c~~  179 (535)
                      |+|.++||.++|+|++. .++|+|.|+ +||+|..|++
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            67888999999999875 578999996 6999999863

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.6e-05  Score=51.48  Aligned_cols=34  Identities=21%  Similarity=0.548  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCeeccCC--CCceecCCCCCCCCCCCC
Q psy9424         146 CEGILCGRNALCTASD--HHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       146 C~~~~C~~~g~C~~~~--~~~~C~C~~Gf~g~~c~~  179 (535)
                      |.++||.++|+|++..  ++|+|.|++||+|..|++
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~   36 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI   36 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCc
Confidence            5568999999999753  579999999999999874

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=1.1e-05  Score=52.55  Aligned_cols=39  Identities=41%  Similarity=0.870  Sum_probs=29.9

Q ss_pred             eCCcCCCC--CCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424         279 LIDFCAAK--PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC  318 (535)
Q Consensus       279 ~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C  318 (535)
                      ||+||+..  .|. +++|+|++|+|+|.|++||+.....++|
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            47788653  464 5799999999999999999976654433

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=4.5e-05  Score=52.44  Aligned_cols=27  Identities=19%  Similarity=0.400  Sum_probs=22.2

Q ss_pred             CCCCCceeeecCCCeeeeCCCCCcCCC
Q psy9424         375 ACGVNSLCNVLTHRKVCFCPRGFTGDP  401 (535)
Q Consensus       375 ~C~~~~~C~~~~g~~~C~C~~G~~g~~  401 (535)
                      .+.-..+|+|++|+|+|.|++||++..
T Consensus        19 ~~~c~~~C~Nt~GsY~C~C~~Gy~l~~   45 (53)
T d1apqa_          19 QPQCQHLCHNYVGGYFCSCRPGYELQE   45 (53)
T ss_dssp             SCTTSSEEEEETTEEEEECSTTCEECT
T ss_pred             CCCccCEeEcCCCCeEeECCCCCeECC
Confidence            344456899999999999999999664

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.9e-05  Score=51.07  Aligned_cols=32  Identities=22%  Similarity=0.608  Sum_probs=27.9

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          32 RNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        32 ~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      ||||+..++|.+  .|+++.|+|+|.|++||+..
T Consensus         1 idEC~~~~~C~~--~C~n~~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           1 IDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CCTTTTTTSCSS--CEECSSSCCEECCCTTEEEC
T ss_pred             CccCCCCCCCCC--EeECCCCCEEeECCCCCeEC
Confidence            678986778864  79999999999999999976

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.4e-05  Score=52.31  Aligned_cols=40  Identities=35%  Similarity=0.727  Sum_probs=31.1

Q ss_pred             eeCCcCCCC--CCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424         278 HLIDFCAAK--PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC  318 (535)
Q Consensus       278 ~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C  318 (535)
                      +||+||+..  .|. +++|++++|+|+|.|++||+.....++|
T Consensus         1 qDinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2           1 EDIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             EECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCcccccCCCCCcC-CCEEECCCCCeEeECCCCCeECcCCCcc
Confidence            478899653  464 4699999999999999999987655433

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=6.6e-06  Score=53.97  Aligned_cols=34  Identities=18%  Similarity=0.475  Sum_probs=29.0

Q ss_pred             cCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          31 CRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +||||.. ...|. +++|+++.|+|+|.|++||+..
T Consensus         2 DinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~   36 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLN   36 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBC
T ss_pred             CcccccCCCCCcC-CCEEECCCCCeEeECCCCCeEC
Confidence            3899985 56675 5699999999999999999876

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.41  E-value=2.3e-05  Score=50.16  Aligned_cols=28  Identities=25%  Similarity=0.604  Sum_probs=26.0

Q ss_pred             CCCCCCceeeecCCCeeeeCCCCCcCCC
Q psy9424         374 GACGVNSLCNVLTHRKVCFCPRGFTGDP  401 (535)
Q Consensus       374 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~  401 (535)
                      +.|+.+|+|+|++|+|.|.|++||+|++
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGNG   34 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCCC
Confidence            4688899999999999999999999986

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=1.9e-05  Score=50.59  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=26.5

Q ss_pred             CCCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         456 PAPCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       456 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                      .+.|+.+++|++++|+|.|+|++||+|+.
T Consensus         6 ~~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2           6 RHQCSVHAECRDYATGFCCRCVANYTGNG   34 (40)
T ss_dssp             GGGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred             CCCCCCCCEeecCCCCeEeECCCCCcCCC
Confidence            45688899999999999999999999986

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=6.2e-05  Score=51.72  Aligned_cols=35  Identities=14%  Similarity=0.233  Sum_probs=27.8

Q ss_pred             cCCCCCC-CCCCCCC------CeeeecCCCceeeCCCCCcCC
Q psy9424          31 CRNPCEA-DEVCGRN------AECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        31 ~~d~C~~-~~~C~~~------g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +||||+. ...|..+      ..|+++.|+|+|.|++||++.
T Consensus         3 DidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~   44 (53)
T d1apqa_           3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQ   44 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEEC
T ss_pred             ecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeEC
Confidence            4899986 4445333      379999999999999999865

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=2.2e-05  Score=56.22  Aligned_cols=36  Identities=22%  Similarity=0.473  Sum_probs=30.9

Q ss_pred             cCCCCCCCCCCCCeee-----eCCCCceeeCCCCCcCCCCC
Q psy9424         451 VDPCSPAPCGPNAQCS-----VANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       451 ~d~C~~~~C~~~~~C~-----~~~g~~~C~C~~G~~G~~c~  486 (535)
                      .++|..++|.|+|+|+     +..++|+|+|++||+|..|+
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcC
Confidence            4566689999999995     45578999999999999997

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=0.00011  Score=50.27  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=29.3

Q ss_pred             CCCCCCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~  486 (535)
                      ++|.+++|.|+|+|+..  ..+|+|.|++||+|..|+
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce   43 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCc
Confidence            34457899999999754  458999999999999987

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=2.8e-05  Score=49.63  Aligned_cols=32  Identities=22%  Similarity=0.496  Sum_probs=28.2

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          32 RNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        32 ~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      ||||+..++|+  ..|+++.|+|+|.|++||++.
T Consensus         2 idEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           2 IDECENGGFCS--GVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             CCHHHHCSSCS--SEEEECSSSEEEEECSSSSCE
T ss_pred             ccccCCCcCcc--CEeeCCCCCeEeECCCCCeeC
Confidence            78887677886  489999999999999999975

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=4.1e-05  Score=48.83  Aligned_cols=32  Identities=19%  Similarity=0.353  Sum_probs=27.7

Q ss_pred             cCCCC-CCCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         451 VDPCS-PAPCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       451 ~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                      ||||+ .++|+  ..|+|++|+|+|.|++||++..
T Consensus         2 idEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           2 IDECENGGFCS--GVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             CCHHHHCSSCS--SEEEECSSSEEEEECSSSSCEE
T ss_pred             ccccCCCcCcc--CEeeCCCCCeEeECCCCCeeCC
Confidence            78887 67785  6999999999999999999754

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00012  Score=47.18  Aligned_cols=39  Identities=38%  Similarity=0.815  Sum_probs=30.3

Q ss_pred             CCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         280 IDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       280 ~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      ||||+. .+|.  .+|++++|+|+|.|++||+.....++|++
T Consensus         1 idEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           1 IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CCTTTTTTSCS--SCEECSSSCCEECCCTTEEECTTTCCEEE
T ss_pred             CccCCCCCCCC--CEeECCCCCEEeECCCCCeECCCCCcccc
Confidence            467753 3563  59999999999999999998876666653

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.0001  Score=48.65  Aligned_cols=34  Identities=21%  Similarity=0.286  Sum_probs=26.2

Q ss_pred             CCCCCC-CCC-CCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          32 RNPCEA-DEV-CGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        32 ~d~C~~-~~~-C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      ||||+. ... ..-...|+++.|+|+|.|++||...
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~   36 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLH   36 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEEC
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeEC
Confidence            678875 222 2234589999999999999999866

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.0001  Score=49.26  Aligned_cols=35  Identities=17%  Similarity=0.372  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424         452 DPCSPAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       452 d~C~~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~  486 (535)
                      ++|.+++|.|+|+|+..  ..+|+|.|++||+|..|+
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce   41 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ   41 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCC
Confidence            45557899999999763  467999999999999986

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00013  Score=48.11  Aligned_cols=41  Identities=29%  Similarity=0.567  Sum_probs=30.9

Q ss_pred             CCcCCCCC---CCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424         280 IDFCAAKP---CGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS  320 (535)
Q Consensus       280 ~~~C~~~~---C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~  320 (535)
                      ||||+..+   ..-...|++++|+|+|.|++||......++|++
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            46776532   233569999999999999999998877666643

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.01  E-value=0.00012  Score=48.27  Aligned_cols=40  Identities=25%  Similarity=0.531  Sum_probs=28.5

Q ss_pred             CCcCCCCC---CCCCCeeecCCCCeeeeCCCCCccCCCCCCCC
Q psy9424         280 IDFCAAKP---CGPGARCDNSRGSYKCLCPLGLVGDPYGAGCV  319 (535)
Q Consensus       280 ~~~C~~~~---C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~  319 (535)
                      ||||+..+   ....+.|++++|+|+|+|++||+.....++|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccc
Confidence            46775432   23356999999999999999999877666554

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.00  E-value=0.00012  Score=48.33  Aligned_cols=34  Identities=15%  Similarity=0.225  Sum_probs=24.2

Q ss_pred             CCCCCC-CCC-CCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          32 RNPCEA-DEV-CGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        32 ~d~C~~-~~~-C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      ||||+. .+. ..-...|+++.++|+|.|++||+..
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~   36 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILH   36 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEEC
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEEC
Confidence            578875 222 2224589999999999999999865

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.94  E-value=0.00041  Score=47.32  Aligned_cols=36  Identities=28%  Similarity=0.547  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCeecc--CCCCceecCCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTA--SDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~--~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      ++|..++|.++|+|+.  ...+|+|.|++||+|..||.
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            3556689999999975  34589999999999999874

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=9.4e-05  Score=52.78  Aligned_cols=37  Identities=22%  Similarity=0.545  Sum_probs=31.3

Q ss_pred             cCCCCCCCCCCCCeec-----cCCCCceecCCCCCCCCCCCC
Q psy9424         143 RPACEGILCGRNALCT-----ASDHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       143 ~~~C~~~~C~~~g~C~-----~~~~~~~C~C~~Gf~g~~c~~  179 (535)
                      .++|.+++|.++|+|.     +..++|+|.|++||+|..|++
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCC
Confidence            4567778999999994     456789999999999999874

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.00046  Score=45.99  Aligned_cols=36  Identities=22%  Similarity=0.528  Sum_probs=29.6

Q ss_pred             CCCCCCCCCCCCeeccC--CCCceecCCCCCCCCCCCC
Q psy9424         144 PACEGILCGRNALCTAS--DHHATCSCKPGYVGHPGPS  179 (535)
Q Consensus       144 ~~C~~~~C~~~g~C~~~--~~~~~C~C~~Gf~g~~c~~  179 (535)
                      ++|..++|.++|+|+..  ..+|+|.|++||+|..||+
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            45666889999999753  3579999999999999874

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00091  Score=43.04  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=25.9

Q ss_pred             CCCCC--CCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          33 NPCEA--DEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        33 d~C~~--~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      |||+.  .+.|++  .|+++.++|+|.|++||+..
T Consensus         1 dEC~~~~~~~C~~--~C~n~~Gsy~C~C~~Gy~L~   33 (42)
T d1nzia2           1 NECTDFVDVPCSH--FCNNFIGGYFCSCPPEYFLH   33 (42)
T ss_dssp             CTTTC-CCCCSSS--EEEEETTEEEEECCTTCEEC
T ss_pred             CCCCCCCCcCCCC--EeecCCCCEEEeCCCCCEEC
Confidence            57764  357875  79999999999999999866

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0014  Score=39.28  Aligned_cols=32  Identities=28%  Similarity=0.622  Sum_probs=27.3

Q ss_pred             CCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          33 NPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        33 d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      |+|+..++|.+ |+|.+..|+|+|.|.+||.-.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSCCC
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcCCC
Confidence            57777788975 799999999999999999743

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.002  Score=38.65  Aligned_cols=32  Identities=38%  Similarity=0.790  Sum_probs=26.4

Q ss_pred             CCCC-CCCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424         452 DPCS-PAPCGPNAQCSVANHRPLCSCPAGLMGLP  484 (535)
Q Consensus       452 d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  484 (535)
                      |+|+ .+||. +++|.|+.|+|.|.|..||...+
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence            5565 67887 48999999999999999997543

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0022  Score=41.12  Aligned_cols=31  Identities=32%  Similarity=0.667  Sum_probs=25.2

Q ss_pred             CCCCCCeeecCCCCeeeeCCCCCccCCCCCCCC
Q psy9424         287 PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCV  319 (535)
Q Consensus       287 ~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~  319 (535)
                      +|.  ..|++++|+|+|.|++||++....++|.
T Consensus        10 ~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2          10 PCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCC--CEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            464  4899999999999999999887666553

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0017  Score=41.29  Aligned_cols=32  Identities=22%  Similarity=0.421  Sum_probs=27.3

Q ss_pred             CCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          32 RNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        32 ~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +|||.. .+.|++  .|+++.++|+|.|++||+..
T Consensus         2 ~neC~~~nggC~h--~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGCSH--VCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGCSS--EEEECSSSEEEECCTTCCEE
T ss_pred             cccCCCCCCCCcC--EEEcCCCCEEEECCCCCEEC
Confidence            678876 567875  89999999999999999864

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0025  Score=40.43  Aligned_cols=33  Identities=27%  Similarity=0.591  Sum_probs=24.7

Q ss_pred             CCcCCCCCCCCCCeeecCCCCeeeeCCCCCccC
Q psy9424         280 IDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGD  312 (535)
Q Consensus       280 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~  312 (535)
                      ++||+...-.-..+|++++++|+|.|++||+..
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC
Confidence            467765432223499999999999999999874

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0046  Score=40.41  Aligned_cols=36  Identities=19%  Similarity=0.419  Sum_probs=26.8

Q ss_pred             CCCCCC--CCCCCCCCeeee--cCCCceeeCCCCCcCCCCC
Q psy9424          32 RNPCEA--DEVCGRNAECAV--VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        32 ~d~C~~--~~~C~~~g~C~~--~~~~~~C~C~~Gf~G~~c~   68 (535)
                      +.+|..  .+.|.+ |.|..  ...++.|.|++||+|++|+
T Consensus         3 i~~C~~~~~~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe   42 (46)
T d1k36a_           3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             eeeCCCcCCCcCcC-CEEEEeCCCCccEeECCCCceecCce
Confidence            345554  578997 77854  4457999999999999654

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.0048  Score=40.28  Aligned_cols=30  Identities=23%  Similarity=0.536  Sum_probs=24.3

Q ss_pred             CCCCCCCCeeee--CCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSV--ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~  486 (535)
                      .++|.| |.|..  ....|.|.|++||+|..|+
T Consensus        11 ~~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe   42 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             CCcCcC-CEEEEeCCCCccEeECCCCceecCce
Confidence            578987 67753  4567999999999999986

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.0051  Score=40.94  Aligned_cols=31  Identities=23%  Similarity=0.433  Sum_probs=26.1

Q ss_pred             CCCCCCCCeeeeC-CCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSVA-NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~c~  486 (535)
                      .+.|.|++.|... ...+.|.|+.||+|..|+
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe   44 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCeeCCCc
Confidence            5679999999544 567999999999999986

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.0064  Score=40.45  Aligned_cols=36  Identities=25%  Similarity=0.516  Sum_probs=27.3

Q ss_pred             CCCCC--CCCCCCCCeeee-cCCCceeeCCCCCcCCCCC
Q psy9424          33 NPCEA--DEVCGRNAECAV-VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        33 d~C~~--~~~C~~~g~C~~-~~~~~~C~C~~Gf~G~~c~   68 (535)
                      ++|..  .+.|.+++.|.. ....+.|.|+.||+|.+|+
T Consensus         6 ~pC~~~~~~yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe   44 (50)
T d1ioxa_           6 SRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             EECCGGGTTSCTTCCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             CccCcccCCCccCCeEEEeCCCCCcEeECCCCCeeCCCc
Confidence            35543  578999998854 4557899999999999654

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.0051  Score=40.75  Aligned_cols=37  Identities=24%  Similarity=0.466  Sum_probs=27.8

Q ss_pred             CCCCCC--CCCCCCCCeeee-cCCCceeeCCCCCcCCCCC
Q psy9424          32 RNPCEA--DEVCGRNAECAV-VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        32 ~d~C~~--~~~C~~~g~C~~-~~~~~~C~C~~Gf~G~~c~   68 (535)
                      .++|..  .+.|.+++.|.. ....+.|.|++||+|.+|+
T Consensus         4 ~~pC~~~~~~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_           4 FNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             EECCCCCSSCSSTTEEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             cCccCcccCCEeeCCeEEecCCCCCcEeECCCCCEecCCc
Confidence            345654  578999887744 4458899999999999654

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.0063  Score=40.30  Aligned_cols=31  Identities=19%  Similarity=0.453  Sum_probs=25.6

Q ss_pred             CCCCCCCCeeeeC-CCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSVA-NHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~c~  486 (535)
                      .+.|.|++.|... ...+.|.|++||+|..|+
T Consensus        12 ~~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_          12 TQFCFHGTCRFLVQEDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             SCSSTTEEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCEeeCCeEEecCCCCCcEeECCCCCEecCCc
Confidence            5678998888544 467899999999999986

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.89  E-value=0.017  Score=38.53  Aligned_cols=38  Identities=24%  Similarity=0.598  Sum_probs=27.9

Q ss_pred             CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy9424          38 DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQC   88 (535)
Q Consensus        38 ~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C   88 (535)
                      .+.|++  .|+++.++|+|.|++||+..           .+..+|++++++
T Consensus         5 NGgC~h--~C~~~~~~~~C~C~~Gy~L~-----------~D~~tC~~~~~~   42 (51)
T d1kigl_           5 NGGCDQ--FCREERSEVRCSCAHGYVLG-----------DDSKSCVSTERF   42 (51)
T ss_dssp             TTSSSS--CCCEETTEECCCCCTTEEEC-----------TTSSCEEECSSS
T ss_pred             CCCccc--EeEcCCCcEEeEcCCCCEEC-----------CCCCccccCCcc
Confidence            345654  58999999999999999876           344566666554

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.70  E-value=0.02  Score=38.22  Aligned_cols=32  Identities=28%  Similarity=0.589  Sum_probs=27.5

Q ss_pred             eeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424         293 RCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC  324 (535)
Q Consensus       293 ~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C  324 (535)
                      .|++++++|+|.|++||......++|++++++
T Consensus        11 ~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_          11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             EeEcCCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            68888999999999999998888888776665

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.26  E-value=0.034  Score=36.83  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=26.0

Q ss_pred             CeeecCCCCeeeeCCCCCccCCCCCCCCCCCC
Q psy9424         292 ARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQ  323 (535)
Q Consensus       292 ~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~  323 (535)
                      ..|++++++|+|.|++||+.....++|+.+.+
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             cEeecCCCCeEEECCCCCEECCCCCccccCCC
Confidence            38889999999999999999887777765443

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.14  E-value=0.036  Score=34.93  Aligned_cols=30  Identities=27%  Similarity=0.617  Sum_probs=23.2

Q ss_pred             CCCCCCCCeeee--cCCCceeeCCCCCcCCCCC
Q psy9424          38 DEVCGRNAECAV--VNHTPRCTCVAGTVGDPKY   68 (535)
Q Consensus        38 ~~~C~~~g~C~~--~~~~~~C~C~~Gf~G~~c~   68 (535)
                      .+-|.+ |+|+-  ....+.|+|..||+|.+|.
T Consensus         7 ~~yCih-G~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           7 KDFCIH-GECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             TTCCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CCEeEC-cEEeecCcCCCceeECCCCCeecCcc
Confidence            456886 99965  3457899999999999653

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.34  E-value=0.058  Score=32.39  Aligned_cols=30  Identities=20%  Similarity=0.481  Sum_probs=24.3

Q ss_pred             CCCCCCeeeeC---CCCceeeCCCCCcCCCCCC
Q psy9424         458 PCGPNAQCSVA---NHRPLCSCPAGLMGLPSAN  487 (535)
Q Consensus       458 ~C~~~~~C~~~---~g~~~C~C~~G~~G~~c~~  487 (535)
                      .|.|+|+|+..   .+-.+|.||.+|.|..|++
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEi   35 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   35 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEe
Confidence            48899999863   3345899999999999974

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.39  E-value=0.098  Score=34.50  Aligned_cols=30  Identities=20%  Similarity=0.262  Sum_probs=23.6

Q ss_pred             CeeeeCCCCceeeCCCCCcCCCCCCCccccC
Q psy9424         463 AQCSVANHRPLCSCPAGLMGLPSANTACVRT  493 (535)
Q Consensus       463 ~~C~~~~g~~~C~C~~G~~G~~c~~~~C~~~  493 (535)
                      ..|++++++|+|.|++||+...- ...|...
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D-~~tC~~~   40 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDD-LLQCHPA   40 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTT-SSCEEEC
T ss_pred             cEeecCCCCeEEECCCCCEECCC-CCccccC
Confidence            57999999999999999998753 2455544

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.37  E-value=0.047  Score=36.31  Aligned_cols=32  Identities=22%  Similarity=0.544  Sum_probs=25.3

Q ss_pred             CeeecCCCCeeeeCCCCCccCCCCCCCCCCCC
Q psy9424         292 ARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQ  323 (535)
Q Consensus       292 ~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~  323 (535)
                      ..|++++++|+|.|++||......++|..+.+
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~   43 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLADNGKACIPTGP   43 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             cEeecCCCCeEeEcCCCCEECCCCCccccCCc
Confidence            37888889999999999998877777765443

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.07  E-value=0.033  Score=35.09  Aligned_cols=21  Identities=24%  Similarity=0.537  Sum_probs=17.2

Q ss_pred             CCCeeeecCCCceeeCCCCCcCCCC
Q psy9424          43 RNAECAVVNHTPRCTCVAGTVGDPK   67 (535)
Q Consensus        43 ~~g~C~~~~~~~~C~C~~Gf~G~~c   67 (535)
                      .+|+|+..    +|+|.+||+|..+
T Consensus        19 ~hG~C~~G----~C~C~~Gw~G~~C   39 (41)
T d1l3ya_          19 GRGLCFCG----KCRCHPGFEGSAC   39 (41)
T ss_dssp             HHEEEETT----EEEECTTCCTTTT
T ss_pred             CCCeEECC----EEEcCCCCcccCc
Confidence            47888753    8999999999954

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.36  E-value=0.062  Score=35.66  Aligned_cols=25  Identities=20%  Similarity=0.481  Sum_probs=21.2

Q ss_pred             CCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424          39 EVCGRNAECAVVNHTPRCTCVAGTVGD   65 (535)
Q Consensus        39 ~~C~~~g~C~~~~~~~~C~C~~Gf~G~   65 (535)
                      +.|++  .|+++.++|+|.|++||+..
T Consensus         8 GgC~h--~C~n~~g~~~C~C~~Gy~L~   32 (51)
T d2p3ua1           8 GDCDQ--FCHEEQNSVVCSCARGYTLA   32 (51)
T ss_dssp             GGCSS--EEEEETTEEEEECCTTEEEC
T ss_pred             CCccc--EeecCCCCeEeEcCCCCEEC
Confidence            34654  79999999999999999976

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.30  E-value=0.11  Score=34.17  Aligned_cols=31  Identities=16%  Similarity=0.315  Sum_probs=22.2

Q ss_pred             CCCCC-CCCCCCCCeeee------cCCCceeeCCCCCcCC
Q psy9424          33 NPCEA-DEVCGRNAECAV------VNHTPRCTCVAGTVGD   65 (535)
Q Consensus        33 d~C~~-~~~C~~~g~C~~------~~~~~~C~C~~Gf~G~   65 (535)
                      |+|.. .+.|++  .|+.      +.++|+|.|+.||+..
T Consensus         5 neC~~~NGGC~h--~Cl~~p~~~n~~~~y~C~C~~G~~L~   42 (50)
T d1ijqa2           5 ERTTLSNGGCQY--LCLPAPQINPHSPKFTCACPDGMLLA   42 (50)
T ss_dssp             SSSSSGGGGCSS--EEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred             cccCCCCCCCcC--ccCCCcCcccCCCCEEEeCCCCCEEC
Confidence            45554 345765  6863      4568999999999976

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.81  E-value=0.1  Score=29.84  Aligned_cols=25  Identities=24%  Similarity=0.573  Sum_probs=19.4

Q ss_pred             CCCCCCCeeeecCCCceeeCCCCCcCCCC
Q psy9424          39 EVCGRNAECAVVNHTPRCTCVAGTVGDPK   67 (535)
Q Consensus        39 ~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c   67 (535)
                      ..|++||.|.-.    .|+|.+||+|+.+
T Consensus         3 ~~C~ghG~C~CG----~C~C~~gw~G~~C   27 (31)
T d1jv2b4           3 EMCSGHGQCSCG----DCLCDSDWTGYYC   27 (31)
T ss_dssp             CCSCCCTTCCST----TTCCCTTEESSSS
T ss_pred             eeccCCCcccCC----ceEccCCcccccc
Confidence            357777777643    6999999999955

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.80  E-value=0.13  Score=32.30  Aligned_cols=30  Identities=23%  Similarity=0.493  Sum_probs=23.5

Q ss_pred             CCCCCCCCeeee--CCCCceeeCCCCCcCCCCC
Q psy9424         456 PAPCGPNAQCSV--ANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       456 ~~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~  486 (535)
                      .+-|-+ |+|..  ....+.|.|+.||+|..|+
T Consensus         7 ~~yCih-G~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           7 KDFCIH-GECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             TTCCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CCEeEC-cEEeecCcCCCceeECCCCCeecCcc
Confidence            345766 99964  3467899999999999985

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.01  E-value=0.27  Score=32.22  Aligned_cols=24  Identities=21%  Similarity=0.559  Sum_probs=18.8

Q ss_pred             cCCCCeeeeCCCCCccCCCCCCCC
Q psy9424         296 NSRGSYKCLCPLGLVGDPYGAGCV  319 (535)
Q Consensus       296 ~~~g~~~C~C~~Gy~g~~c~~~C~  319 (535)
                      +..++|+|.|+.||+.....++|+
T Consensus        26 n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2          26 PHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             TTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cCCCCEEEeCCCCCEECCCCCccc
Confidence            445789999999999887666553

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.89  E-value=0.22  Score=31.41  Aligned_cols=34  Identities=24%  Similarity=0.724  Sum_probs=24.5

Q ss_pred             CCCCC--CCCCCCCCeeeecCCCceeeCC-CCCcCCCCCCC
Q psy9424          33 NPCEA--DEVCGRNAECAVVNHTPRCTCV-AGTVGDPKYQS   70 (535)
Q Consensus        33 d~C~~--~~~C~~~g~C~~~~~~~~C~C~-~Gf~G~~c~~C   70 (535)
                      |.|..  ...|..+|+|+-.    .|+|. +||+|..++.|
T Consensus         3 d~C~~~~g~iCng~G~C~cG----~C~C~~~gy~G~~Ce~C   39 (43)
T d1jv2b5           3 DTCMSSNGLLCSGRGKCECG----SCVCIQPGSYGDTCEKC   39 (43)
T ss_dssp             STTCCSSCSGGGGTEEEETT----EEEECCSSCBSTTSCBC
T ss_pred             cccCCCCCCEECCCCEEECC----EeEeCCCCccCCccccC
Confidence            34543  3468899999854    89995 79999976544

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.91  E-value=0.39  Score=28.69  Aligned_cols=28  Identities=25%  Similarity=0.529  Sum_probs=20.2

Q ss_pred             CCCCCeeecC---CCCeeeeCCCCCccCCCC
Q psy9424         288 CGPGARCDNS---RGSYKCLCPLGLVGDPYG  315 (535)
Q Consensus       288 C~~~~~C~~~---~g~~~C~C~~Gy~g~~c~  315 (535)
                      |.++++|+..   .+-.+|.|+.+|.|..|+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCceeEE
Confidence            6677777643   345678888888888776

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.89  E-value=0.55  Score=31.35  Aligned_cols=30  Identities=33%  Similarity=0.650  Sum_probs=21.2

Q ss_pred             CCceeee--cCCCeee-eCCCCCcCCCCCCCCc
Q psy9424         378 VNSLCNV--LTHRKVC-FCPRGFTGDPETECVR  407 (535)
Q Consensus       378 ~~~~C~~--~~g~~~C-~C~~G~~g~~~~~C~~  407 (535)
                      +++.|..  ..+..+| .|++||+|..++.|.+
T Consensus         5 ~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~   37 (55)
T d1kloa1           5 GGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDD   37 (55)
T ss_dssp             TTCCEEECSSSCCEEECSCCTTEESTTSCEECT
T ss_pred             CCCccceeCCCCCEEcCCCCCCCccCcccccCC
Confidence            3455543  3456788 5999999999877664

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.33  E-value=0.23  Score=28.33  Aligned_cols=25  Identities=28%  Similarity=0.612  Sum_probs=19.6

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424         458 PCGPNAQCSVANHRPLCSCPAGLMGLPSA  486 (535)
Q Consensus       458 ~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  486 (535)
                      .|+++|.|.=.    .|+|.+||+|..|.
T Consensus         4 ~C~ghG~C~CG----~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCSCG----DCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCCST----TTCCCTTEESSSSC
T ss_pred             eccCCCcccCC----ceEccCCccccccc
Confidence            46677777543    79999999999884