Psyllid ID: psy9440

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-
IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR
cEEHHHHHHccccccEEEcccccccHHHHHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHccccccHHHHHHccccccHHHHccccccEEccccccccEEccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccHHHHHcccccccHHHHHHHcccccEEEEEccccccHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccEEccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEEEEEccccccccccccEEEEcccEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccEEEEEcccccccccHHHHHHHHHccccccEEccccEEEEEEccHHHHHHHHHccccccEEEEEEEc
cHHHHHHHHccccccEEEEccccHHHHHHHHHcccccHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHcccccEEEEEcccccEEEEccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHccccccccccccEEEcccccccccccHHccccHHHHHHHHHcHcHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHccccccHHHHccccccccccccccccccEcccccccccccccccccccccccEEEEEEEcccccccHccccEccEEEccHHHHHHHHHHHHHHHccccEEEccEccccccccccEEEEcccEEEEEEcccEEEEEEEEEccccccccHccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHcccHHHHHccccccccEEEcHHHHHHHHHcccccccEEEEEEcc
IALVDLlssvgispegivghsdfngekrpVWYVFSGMGSQWAGMVKGLlhipdfngekrpVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEAlrgenfdlipvitsedadTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLrssldriipapkprsarwisssipedhwgtplaqqsspayhvnnllSPVLFYEALqhvpenavvIEIAPHALLQAIIKRakpgavsigltkrgapdlpahLLSGLGklynaglqprlnqllppvkfpvgrgtpmIQSLVEWDHSTEWSVASfagkggsrsgecvidvdlskeedaylsghaidgrilfpatgTEEAVEHFLQKIESIPRDDEFIALLHEIHNtniaghpyrgefelcesgsvavsgrirtpedvskeqldlpeltpaISSEMLElssadvykdlrlrgydysgafrgvsqsdnkgftgkldwtgnWISYIDTMLQFSILGintrelylptrmqrvcidpAKHKALVETlsgdkktvpvamyr
IALVDLlssvgispegivghsdfngEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAeagpklrssldRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASfagkggsrsgECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRirtpedvskeqldlpelTPAISSEMLELSSADVYKDLRLRGYDYSgafrgvsqsdnkgftgkLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKAlvetlsgdkktvpvamyr
IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR
****DLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEA*******************************W*********PAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSV**************VIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAV********************************SADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVE***************
IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPV******************LHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRI*********RWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEW****************VIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRIRTPED******************MLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKA********KKTVPVAMYR
IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASF********GECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR
IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query521 2.2.26 [Sep-21-2011]
P12785 2505 Fatty acid synthase OS=Ra yes N/A 0.930 0.193 0.379 1e-86
P49327 2511 Fatty acid synthase OS=Ho yes N/A 0.944 0.195 0.372 1e-84
P19096 2504 Fatty acid synthase OS=Mu yes N/A 0.936 0.194 0.375 4e-83
P12276 2512 Fatty acid synthase OS=Ga yes N/A 0.798 0.165 0.385 2e-74
Q71SP7 2513 Fatty acid synthase OS=Bo yes N/A 0.948 0.196 0.345 2e-73
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 Back     alignment and function desciption
 Score =  320 bits (821), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 212/559 (37%), Positives = 294/559 (52%), Gaps = 74/559 (13%)

Query: 1    IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
            IAL+DLL+S+G+ P+GI+GHS               +G    G   G L       ++  
Sbjct: 561  IALIDLLTSMGLKPDGIIGHS---------------LGEVACGYADGCL------SQREA 599

Query: 61   VWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFD---------LIPVI-TSE 110
            V      + + W G         + D ++   + A  G +++         ++P    SE
Sbjct: 600  V------LAAYWRGQC-------IKDANLPAGSMAAVGLSWEECKQRCPPGVVPACHNSE 646

Query: 111  DADTF---EHILNSFVS------IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPK 161
            D  T    +  +N FV       + A +V     AFHS ++    P L  +L ++I  P+
Sbjct: 647  DTVTISGPQAAVNEFVEQLKQEGVFAKEVRTGGLAFHSYFMEGIAPTLLQALKKVIREPR 706

Query: 162  PRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHAL 221
            PRSARW+S+SIPE  W + LA+ SS  Y+VNNL+SPVLF EAL HVPE+AVV+EIAPHAL
Sbjct: 707  PRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHAL 766

Query: 222  LQAIIKRA-KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRG 280
            LQA++KR  KP    I L KR   D     L+ LGK++  G+    N L PPV+FPV RG
Sbjct: 767  LQAVLKRGVKPSCTIIPLMKRDHKDNLEFFLTNLGKVHLTGIDINPNALFPPVEFPVPRG 826

Query: 281  TPMIQSLVEWDHSTEWS--VASFAGKGGSRSGECVIDVDLSKE-EDAYLSGHAIDGRILF 337
            TP+I   ++WDHS  W   VA     G S S   V ++D S E  D YL  H IDGR+LF
Sbjct: 827  TPLISPHIKWDHSQTWDIPVAEDFPNGSSSSSATVYNIDASSESSDHYLVDHCIDGRVLF 886

Query: 338  PATGTEEAVEHFLQKIESIPRDDEFIALLH-EIHNTNIAGHPYRGE-------------F 383
            P TG    V   L +  S+  ++  +   +   H   I   P  G              F
Sbjct: 887  PGTGYLYLVWKTLARSLSLSLEETPVVFENVTFHQATIL--PRTGTVPLEVRLLEASHAF 944

Query: 384  ELCESGSVAVSGRIRTPEDVSKEQLDLPEL-TPAISSEMLELSSADVYKDLRLRGYDYSG 442
            E+ +SG++ VSG++   ED   +  D PE+  PA S  +  L+  +VYK+LRLRGYDY  
Sbjct: 945  EVSDSGNLIVSGKVYQWEDPDSKLFDHPEVPIPAESESVSRLTQGEVYKELRLRGYDYGP 1004

Query: 443  AFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHK 502
             F+GV ++  +G  GKL W  NW++++DTMLQ SILG + + L LPTR+  + IDPA H 
Sbjct: 1005 HFQGVYEATLEGEQGKLLWKDNWVTFMDTMLQISILGFSKQSLQLPTRVTAIYIDPATHL 1064

Query: 503  ALVETLSGDKKTVPVAMYR 521
              V  L GD +   V   R
Sbjct: 1065 QKVYMLEGDTQVADVTTSR 1083
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 1EC: 4
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 Back     alignment and function description
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2 Back     alignment and function description
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 Back     alignment and function description
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query521
328705164 2389 PREDICTED: fatty acid synthase-like isof 0.927 0.202 0.513 1e-137
328705166 2395 PREDICTED: fatty acid synthase-like isof 0.927 0.201 0.513 1e-137
189233593 3189 PREDICTED: similar to fatty acid synthas 0.936 0.153 0.510 1e-135
270014917 2383 hypothetical protein TcasGA2_TC011522 [T 0.925 0.202 0.504 1e-135
345479260 2408 PREDICTED: fatty acid synthase-like isof 0.936 0.202 0.473 1e-128
345479258 2398 PREDICTED: fatty acid synthase-like isof 0.936 0.203 0.477 1e-128
242023225 2381 fatty acid synthase, putative [Pediculus 0.928 0.203 0.460 1e-127
328705168 2113 PREDICTED: fatty acid synthase-like [Acy 0.756 0.186 0.559 1e-124
19920632 2438 CG3523, isoform A [Drosophila melanogast 0.925 0.197 0.466 1e-118
194855338 2544 GG24920 [Drosophila erecta] gi|190660388 0.909 0.186 0.470 1e-118
>gi|328705164|ref|XP_003242717.1| PREDICTED: fatty acid synthase-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/555 (51%), Positives = 355/555 (63%), Gaps = 72/555 (12%)

Query: 1    IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
            +ALVDLL S+GI P+G+VGHS   GE          +G  +A           FN ++  
Sbjct: 584  VALVDLLKSIGIEPDGVVGHS--VGE----------LGCAYADGT--------FNADQAI 623

Query: 61   VWYVFSGMGSQWAGMVKG-LLHIPVFDQSIRKSAEALRGENFDLIPVI-TSEDADTFE-- 116
            +   + G     + + +G +  + +  +  +K   A      DL+     SED+ T    
Sbjct: 624  LAAFWRGRSILESKLPQGSMAAVGLSWEDTKKRLPA------DLVAACHNSEDSVTVSGP 677

Query: 117  -HILNSFVS------IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWIS 169
               L +FV       I A +V  + +AFHSKYIA+A PKLR+SL+RI+P PKPR++RWIS
Sbjct: 678  PSSLTAFVKTLQAEGIFAKEVKSSGYAFHSKYIADAAPKLRNSLERILPNPKPRTSRWIS 737

Query: 170  SSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA 229
            SSIPE  W TPLAQ SS AYHVNNLL+PVLF+EAL HVP++AVVIEIAPHALLQAI+KRA
Sbjct: 738  SSIPEALWNTPLAQMSSTAYHVNNLLAPVLFHEALAHVPKDAVVIEIAPHALLQAILKRA 797

Query: 230  -KPGAVSIGLTKRGA-PDLP-AHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQS 286
              P    IGLTKR   P+   + LLS +GKLYNAG+QP++  L P V +PV +GTPMIQS
Sbjct: 798  LGPECSCIGLTKRSTNPEGNISVLLSAIGKLYNAGVQPKIKNLYPAVSYPVAKGTPMIQS 857

Query: 287  LVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFPATG----- 341
            L+EWDHS EW V+ F  K    SGE VI VDLS EED YLSGHAIDGR+LFPATG     
Sbjct: 858  LIEWDHSVEWFVSDFVQKEAG-SGESVIKVDLSTEEDQYLSGHAIDGRVLFPATGYLTLV 916

Query: 342  -------TEEAVEHFLQKIESI--------PRDDEFIALLHEIHNTNIAGHPYRGEFELC 386
                    ++ +E F   IE++        P+D     L++    T        G FE+C
Sbjct: 917  WRTFAKLQDKNIEDFPVVIENVQFLRATIMPKDGNVNFLINIFEGT--------GNFEIC 968

Query: 387  ESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRG 446
            E GSVAV+GRI  P+D+  EQL+LPE  P +    L L SAD+YKDL LRGYDY G FRG
Sbjct: 969  EGGSVAVTGRIFVPDDIETEQLELPE--PYVDENNLSLKSADIYKDLGLRGYDYKGVFRG 1026

Query: 447  VSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVE 506
            V+++DNKG +GKLDW GNWI+YIDTMLQFSILG+ T+ELYLPTRMQRV IDPAKH   +E
Sbjct: 1027 VNEADNKGISGKLDWIGNWITYIDTMLQFSILGLKTKELYLPTRMQRVIIDPAKHLEFIE 1086

Query: 507  TLSGDKKTVPVAMYR 521
            TL  +   VPV MYR
Sbjct: 1087 TLP-ENSPVPVYMYR 1100

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328705166|ref|XP_001945190.2| PREDICTED: fatty acid synthase-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|189233593|ref|XP_970417.2| PREDICTED: similar to fatty acid synthase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270014917|gb|EFA11365.1| hypothetical protein TcasGA2_TC011522 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|345479260|ref|XP_001605059.2| PREDICTED: fatty acid synthase-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345479258|ref|XP_003423914.1| PREDICTED: fatty acid synthase-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242023225|ref|XP_002432036.1| fatty acid synthase, putative [Pediculus humanus corporis] gi|212517394|gb|EEB19298.1| fatty acid synthase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|328705168|ref|XP_001945287.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|19920632|ref|NP_608748.1| CG3523, isoform A [Drosophila melanogaster] gi|7295848|gb|AAF51148.1| CG3523, isoform A [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|194855338|ref|XP_001968521.1| GG24920 [Drosophila erecta] gi|190660388|gb|EDV57580.1| GG24920 [Drosophila erecta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query521
FB|FBgn0027571 2544 CG3523 [Drosophila melanogaste 0.752 0.154 0.536 1.8e-125
ZFIN|ZDB-GENE-030131-7802 2514 fasn "fatty acid synthase" [Da 0.414 0.085 0.515 1.6e-105
UNIPROTKB|P49327 2511 FASN "Fatty acid synthase" [Ho 0.792 0.164 0.419 9.7e-91
FB|FBgn0042627 2409 v(2)k05816 "v(2)k05816" [Droso 0.923 0.199 0.380 7.6e-85
UNIPROTKB|F1Q2F6 2518 FASN "Uncharacterized protein" 0.414 0.085 0.493 1.5e-84
FB|FBgn0040001 2394 CG17374 [Drosophila melanogast 0.942 0.205 0.355 1.1e-68
UNIPROTKB|E1BWG0 2446 FASN "Fatty acid synthase" [Ga 0.458 0.097 0.468 2.8e-65
UNIPROTKB|F1N8A8 2512 FASN "Fatty acid synthase" [Ga 0.458 0.095 0.468 3e-65
UNIPROTKB|P12276 2512 FASN "Fatty acid synthase" [Ga 0.458 0.095 0.468 3e-65
UNIPROTKB|E1BW07 2513 FASN "Fatty acid synthase" [Ga 0.458 0.095 0.468 3e-65
FB|FBgn0027571 CG3523 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1057 (377.1 bits), Expect = 1.8e-125, Sum P(2) = 1.8e-125
 Identities = 221/412 (53%), Positives = 284/412 (68%)

Query:   125 IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQ 184
             + A  V+ + +AFHSKYIAEAGPKLR SL++IIP  K R+ARWIS+SIPE  W TP+A+Q
Sbjct:   814 VFAKAVNSSGYAFHSKYIAEAGPKLRKSLEKIIPNAKNRTARWISTSIPESAWNTPVAKQ 873

Query:   185 SSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRAK-PGAVSIGLTKRGA 243
             SS AYHVNNLLSPVLF+EALQHVP+NA+ +EIAPH LLQAI+KRA  P A ++ L KRG 
Sbjct:   874 SSAAYHVNNLLSPVLFHEALQHVPKNAISVEIAPHGLLQAILKRALGPDATNLSLVKRGH 933

Query:   244 PDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAG 303
              +     L+ +GKL+ AG QP++  L+ P+ +PVGRGTPM+ S V WDH+ +W VA F G
Sbjct:   934 ENNVEFFLTNVGKLFAAGAQPQVLTLVRPISYPVGRGTPMLNSKVGWDHTQKWLVAKF-G 992

Query:   304 KGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFI 363
             K  S SGE +++VDLSKE+DA+L+GH IDGRILFPATG          K++        +
Sbjct:   993 KETS-SGETIVEVDLSKEDDAFLAGHTIDGRILFPATGYMTLAWQTFAKMQGSEFHKTPV 1051

Query:   364 AL----LHE--IHNTNIA---GHPY---RGEFELCESGSVAVSGRIRTPEDVSKEQLDLP 411
              +     H   I N N     G  +    G FE+CESGS+AVSG+I  PE +  E+L L 
Sbjct:  1052 VMENLVFHRATILNKNAVVKFGINFFDGTGAFEICESGSLAVSGKITIPESIDNEELPLE 1111

Query:   412 ELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDT 471
             E TP+  ++  EL + DVYK+LRLRGYDY G FRG+ +SD    TGKL W  NWIS++DT
Sbjct:  1112 EQTPSAVAK--ELGTNDVYKELRLRGYDYGGIFRGIVRSDTVASTGKLQWVDNWISFMDT 1169

Query:   472 MLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKT---VPVAMY 520
             MLQFSIL  N RELYLPTR++R  I+PAKH  L+  L+ +++    +PV  Y
Sbjct:  1170 MLQFSILSKNLRELYLPTRIERAVINPAKHFELLSALTKEEQVETGLPVQWY 1221
GO:0004312 "fatty acid synthase activity" evidence=ISS
GO:0016295 "myristoyl-[acyl-carrier-protein
GO:0009058 "biosynthetic process" evidence=IEA
GO:0004314 "[acyl-carrier-protein
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0004313 "[acyl-carrier-protein
GO:0004316 "3-oxoacyl-[acyl-carrier-protein
GO:0016296 "palmitoyl-[acyl-carrier-protein
GO:0004320 "oleoyl-[acyl-carrier-protein
GO:0004317 "3-hydroxypalmitoyl-[acyl-carrier-protein
GO:0004319 "enoyl-[acyl-carrier-protein
GO:0004315 "3-oxoacyl-[acyl-carrier-protein
GO:0000166 "nucleotide binding" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
ZFIN|ZDB-GENE-030131-7802 fasn "fatty acid synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P49327 FASN "Fatty acid synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0042627 v(2)k05816 "v(2)k05816" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q2F6 FASN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0040001 CG17374 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1BWG0 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N8A8 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P12276 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW07 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!
3rd Layer2.3.1.39LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query521
pfam00698319 pfam00698, Acyl_transf_1, Acyl transferase domain 2e-17
pfam00698319 pfam00698, Acyl_transf_1, Acyl transferase domain 7e-13
COG33211061 COG3321, COG3321, Polyketide synthase modules and 4e-10
smart00827298 smart00827, PKS_AT, Acyl transferase domain in pol 3e-09
smart00827298 smart00827, PKS_AT, Acyl transferase domain in pol 5e-08
smart00826167 smart00826, PKS_DH, Dehydratase domain in polyketi 8e-04
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information 
 Score = 82.8 bits (205), Expect = 2e-17
 Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 14/136 (10%)

Query: 136 AFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLL 195
           A HS  +   G  L  +L  I P   PR   + ++S           ++    Y   NL 
Sbjct: 191 ASHSPQVEAIGDALALALADIAP-RTPRVPFYSTTSGDPS-----DQRELDAEYWYRNLR 244

Query: 196 SPVLFYEALQHV--PENAVVIEIAPHALLQAIIKR-----AKPGAVSIGLTKRGAPDLPA 248
           +PV F EA+         V +E++PH +L A ++          A  +G   R   D   
Sbjct: 245 NPVRFAEAVLAAAEQGYLVFVEVSPHPVLLAAVEETLKSADGKDATLVGTLIRDQGD-LV 303

Query: 249 HLLSGLGKLYNAGLQP 264
             L  L   +  G+  
Sbjct: 304 TFLYALAVAHLTGVAV 319

Length = 319
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>gnl|CDD|214837 smart00826, PKS_DH, Dehydratase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 521
KOG1202|consensus 2376 100.0
COG33211061 Polyketide synthase modules and related proteins [ 100.0
PF00698318 Acyl_transf_1: Acyl transferase domain; InterPro: 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 99.96
TIGR02816538 pfaB_fam PfaB family protein. The protein PfaB is 99.96
PLN02752343 [acyl-carrier protein] S-malonyltransferase 99.93
smart00827298 PKS_AT Acyl transferase domain in polyketide synth 99.93
TIGR00128290 fabD malonyl CoA-acyl carrier protein transacylase 99.92
TIGR03131295 malonate_mdcH malonate decarboxylase, epsilon subu 99.92
PF14765295 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_ 99.89
COG0331310 FabD (acyl-carrier-protein) S-malonyltransferase [ 99.89
KOG2926|consensus386 99.85
smart00826167 PKS_DH PKS_DH. 99.36
TIGR028132582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.38
PF00698318 Acyl_transf_1: Acyl transferase domain; InterPro: 97.21
TIGR00128290 fabD malonyl CoA-acyl carrier protein transacylase 97.17
smart00827298 PKS_AT Acyl transferase domain in polyketide synth 97.01
TIGR02816538 pfaB_fam PfaB family protein. The protein PfaB is 96.96
TIGR03131295 malonate_mdcH malonate decarboxylase, epsilon subu 96.85
KOG1202|consensus 2376 96.82
COG0331310 FabD (acyl-carrier-protein) S-malonyltransferase [ 96.27
COG33211061 Polyketide synthase modules and related proteins [ 95.31
PLN02752343 [acyl-carrier protein] S-malonyltransferase 95.11
cd01288131 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier 80.71
>KOG1202|consensus Back     alignment and domain information 
Probab=100.00  E-value=8.6e-62  Score=505.99  Aligned_cols=471  Identities=52%  Similarity=0.897  Sum_probs=422.3

Q ss_pred             cCceeEEEEecCchhhhhhcccCCCCCCCCCCCEEEEeCCCChhhHHHHHHhhhcHHHHHHHHHHHHHHhccCCChHHhh
Q psy9440          28 RPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVI  107 (521)
Q Consensus        28 ~a~~~~~~v~~~~~~~l~~~l~~~~~~~~~~~~~~fvf~GqG~~~~~m~~~l~~~p~f~~~~~~~~~~l~~~g~~~~~~~  107 (521)
                      ..++|.+++.+.   +  ...+++..+....++++|+++|||+||+||++.|++.+.|+++|.+|++.+++.|.++.+++
T Consensus       473 ~~pFRGY~vl~~---e--~~~~ev~~~~~~eRPiwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL  547 (2376)
T KOG1202|consen  473 LHPFRGYAVLGG---E--RGGPEVQQVPAGERPIWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVL  547 (2376)
T ss_pred             CCcccceEEecc---c--cCCcceeecCCCCcceEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhh
Confidence            356888888875   3  33345566666668999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCchhhhhhhhHHHHHHHHhhh-------------------------------------------------------
Q psy9440         108 TSEDADTFEHILNSFVSIAAVQVSE-------------------------------------------------------  132 (521)
Q Consensus       108 ~~~~~~~~~~~~~~q~~~~a~q~al-------------------------------------------------------  132 (521)
                      .+.+++.++++..+..++.|+|+||                                                       
T Consensus       548 ~~s~~~tfdn~l~sfvsitAiQiaLtDlLs~lgi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~kG  627 (2376)
T KOG1202|consen  548 TRSDESTFDNILNSFVSITAIQIALTDLLSCLGIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLPKG  627 (2376)
T ss_pred             cCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCCCc
Confidence            9999999999999999999999999                                                       


Q ss_pred             -----------------------------------------------------------cccccchhhHHHHHHHHHHHh
Q psy9440         133 -----------------------------------------------------------NRHAFHSKYIAEAGPKLRSSL  153 (521)
Q Consensus       133 -----------------------------------------------------------v~~afHS~~m~~~~~~~~~~l  153 (521)
                                                                                 -.+||||+.|+.+++++++.|
T Consensus       628 aMAAVGLsWEq~~~~~P~~~~paCHNs~D~~TiSGp~a~v~~~v~qL~~~gvFak~V~t~G~aFHS~~m~a~~p~l~~~l  707 (2376)
T KOG1202|consen  628 AMAAVGLSWEQCKSRCPPDVVPACHNSKDNVTISGPQASVFAFVEQLRAEGVFAKEVRTGGYAFHSPYMEAAAPPLRQSL  707 (2376)
T ss_pred             chhhhcCCHHHHhccCCCcccccccCCCCceEecCChHHHHHHHHHhhhcCeeeeEecCCCccccCHHHHhhChHHHHHH
Confidence                                                                       579999999999999999999


Q ss_pred             cccCCCCCCCCCcEEecCCCCCcCCCCcccCCCchhHhhcCCCceeHHHHHhhcccCCEEEEECCCHhHHHHHHHh-CCC
Q psy9440         154 DRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-KPG  232 (521)
Q Consensus       154 ~~i~~~~~~p~ip~~S~~tg~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~~iEiGP~~~L~~~i~~~-~~~  232 (521)
                      +++.+.+++.+..|+|+...+..|.++.....+++|.++|+.+||.|.+|++.+.++.+.|||.||+.|+..+|+. .++
T Consensus       708 ~k~i~epK~rsarWlSTSipEa~W~s~la~tsSA~Y~vnNl~SPVLF~eAlq~vP~nAv~vEiAPH~LlqAiLkRsL~p~  787 (2376)
T KOG1202|consen  708 EKVIPEPKPRSARWLSTSIPEAQWHSSLARTSSAEYHVNNLVSPVLFHEALQHVPENAVVVEIAPHGLLQAILKRSLKPS  787 (2376)
T ss_pred             HHhcCCCCCcccchhhccCChhhhcChhhhhcchhhhhhccccHHHHHHHHHhCcccceEEEecchHHHHHHHHhhcCCc
Confidence            9999998888999999999988888777888899999999999999999999999999999999999999999988 899


Q ss_pred             ceEEeccCCCCCChHHHHHhhhhhhhhcCCCCCccccCCCCCCCCCCCCccCCCCCCCCCccccccCCcCCCCCCCCCcc
Q psy9440         233 AVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGEC  312 (521)
Q Consensus       233 ~~~~~sl~r~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~p~~~~~~~~LP~y~~~~~~~W~~~~~~~~~~~~~~~~  312 (521)
                      +++++.++|++.++.+.+|..+|.||.+|++++...++++..||+++++++.-|..-|||+..|..+.++...  .+++.
T Consensus       788 ~t~v~Lmkr~h~~NlEffL~~lgrly~aG~~~qi~~l~p~i~ypv~rGTPmi~~lv~WDHtq~W~~~~f~~gs--~s~~a  865 (2376)
T KOG1202|consen  788 CTNVSLMKRGHRNNLEFFLAGLGRLYAAGIQPQILALFPPIEYPVPRGTPMIGPLVKWDHTQKWLVPKFPGGS--GSSAA  865 (2376)
T ss_pred             cceehhhcCcccccHHHHHHHHHHHHHccCCccceeccCCCcccCCCCCcCcccccCccccccccccccCCCC--Cccce
Confidence            9999999999889999999999999999999999999999999999999999999999999999998776543  34778


Q ss_pred             eEEEEccccCcccccCceecCeeeeccccHHHHHHHHHHhh-----cCCCeeeccccccccccccce-----------ec
Q psy9440         313 VIDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKI-----ESIPRDDEFIALLHEIHNTNI-----------AG  376 (521)
Q Consensus       313 ~~~~~l~~~~~p~L~dH~v~g~~i~Paa~yle~a~eA~~~~-----~~~~~~l~dv~~~~~~~~pl~-----------~~  376 (521)
                      +++..++.++.-||.||.++|+++||++||+.+||..+.+.     ..+|+.++||    .|+++.+           .+
T Consensus       866 ~~niD~~~edd~yL~~HtiDGRvLfPaTGymtlaW~tlak~qGldy~ktPVvfEdv----v~h~ATIL~k~~vvkl~v~~  941 (2376)
T KOG1202|consen  866 IYNIDLSKEDDHYLADHTIDGRVLFPATGYMTLAWKTLAKPQGLDYEKTPVVFEDV----VFHRATILPKTGVVKLEVNL  941 (2376)
T ss_pred             EEEccCCccccceeccceecceEEeccccchhHHHHHHhhhccCCcccCceeeeee----eeeeeEeecCCceEEEEEEE
Confidence            89999998899999999999999999999999999998876     3578999999    9999987           23


Q ss_pred             cCcceeEEEEeCCeEEEEEEEEcCCCCCcccCCCCCCCcccccccccCCHHHHHHHHHHcCCCcCcccccccccccCCce
Q psy9440         377 HPYRGEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFT  456 (521)
Q Consensus       377 ~~~~~~f~i~s~~~~h~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~l~~~Gl~yG~~Fr~l~~~~~~~~~  456 (521)
                      .++...|+|.++..+.++|+|....+..+...+.++  .+.......++.+++|+.|+-+|++||+.||+|-+....+..
T Consensus       942 ~~gs~aFEi~e~~~l~~SGki~i~ed~~~~~~~l~e--~~~~~~a~eL~t~dvYKElrLRGYdYg~~FqGI~~s~~s~~t 1019 (2376)
T KOG1202|consen  942 FPGSGAFEICENGSLVVSGKIYIPEDPDPELLDLEE--SPTSAPAEELATADVYKELRLRGYDYGGHFQGILESDLSGDT 1019 (2376)
T ss_pred             cCCCcceEEecCCcEEEeeeEeccCCCchhhccccc--CCCcchhhhhhHHHHHHHHHhcccccchhhhhhhhhcccccc
Confidence            577889999999999999999876554443333332  222234457899999999999999999999999998888889


Q ss_pred             eEEEecCCchhhHHHHHHHHHhhhcCCceeccceeeEEEEecchhhHHHHhhCCC
Q psy9440         457 GKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGD  511 (521)
Q Consensus       457 a~~~~~~~hP~lLD~~~q~~~~~~~~~~~~lP~~i~~l~i~~~~~~~~~~~~~~~  511 (521)
                      +.+.|.++|-.+||.++|..++....+++|+|++|+++.|.|..|.+.....+..
T Consensus      1020 G~L~W~dNWvsFmDtmLQ~siLs~~~~~LylPTrv~~~~IdP~kH~e~~~~~~~~ 1074 (2376)
T KOG1202|consen 1020 GRLQWKDNWVSFMDTMLQFSILSSAKRELYLPTRVERAHIDPAKHLELLYTLQDK 1074 (2376)
T ss_pred             ceEEEeccHHHHHHHHHHHHHHhhcccceecccceeeeeeChHHHHHHHHhhcch
Confidence            9999999999999999999998888889999999999999999999877665543

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A Back     alignment and domain information
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG2926|consensus Back     alignment and domain information
>smart00826 PKS_DH PKS_DH Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>KOG1202|consensus Back     alignment and domain information
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query521
2vz8_A 2512 Crystal Structure Of Mammalian Fatty Acid Synthase 1e-76
3hhd_A965 Structure Of The Human Fatty Acid Synthase Ks-Mat D 6e-57
2jfk_A433 Structure Of The Mat Domain Of Human Fas With Malon 5e-42
2jfd_A425 Structure Of The Mat Domain Of Human Fas Length = 4 5e-39
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 Back     alignment and structure 
Iteration: 1

 Score =  283 bits (725), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 205/557 (36%), Positives = 280/557 (50%), Gaps = 69/557 (12%)
Query: 1    IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
            IAL+DLL+S+G+ P+GI+GHS               +G    G   G L   +       
Sbjct: 561  IALIDLLTSLGLQPDGIIGHS---------------LGEVACGYADGCLTQEE------- 598
Query: 61   VWYVFSGMGSQWAG-MVKGLLHIPVFDQSIRKSAEALRGENF-DLIPVI-TSEDADTF-- 115
                 + + S W G  +K    +P    ++  S E  +      ++P    S+D  T   
Sbjct: 599  -----AVLSSYWRGYCIKEANVLPGAMAAVGLSWEECKQRCPPGIVPACHNSKDTVTISG 653
Query: 116  -EHILNSFVS------IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWI 168
             +  ++ F+       +   +V     AFHS ++    P L   L ++I  PKPRS RW+
Sbjct: 654  PQAAMSEFLQQLKREDVFVKEVRTGGIAFHSYFMESIAPTLLRQLRKVILDPKPRSKRWL 713
Query: 169  SSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKR 228
            S+SIPE  W   LA+  S  Y VNNL+SPVLF EALQHVP +AVV+EIAPHALLQA++KR
Sbjct: 714  STSIPEAQWQGSLARTFSAEYSVNNLVSPVLFQEALQHVPAHAVVVEIAPHALLQAVLKR 773
Query: 229  AKPGAVS-IGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSL 287
            +   + + I L K+   D     LS +G+L+ AG+    N L PPV+FP  RGTP+I   
Sbjct: 774  SLESSCTIIPLMKKDHRDNLEFFLSNVGRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPH 833
Query: 288  VEWDHSTEWSVASFAG--KGGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATG--- 341
            ++WDHS  W V S A    G S S   V   D+S E  D YL  H IDGR+LFP TG   
Sbjct: 834  IKWDHSQAWDVPSAADFPSGSSCSSVAVYKFDVSPESPDHYLVDHCIDGRVLFPGTGYLW 893
Query: 342  -TEEAVEHFL-QKIESIPRDDEFIALLHEIHNTNIAGHPYRGE-------------FELC 386
             T + +   L Q +E  P   E + L    H   I   P  G              FE+ 
Sbjct: 894  LTWKTLARALSQNLEETPVVFEDVTL----HQATIL--PKTGTVSLEVRLLEASHAFEVS 947
Query: 387  ES-GSVAVSGRIRTPEDVSKEQLDL-PELTPAISSEMLELSSADVYKDLRLRGYDYSGAF 444
            +S GS+  SG++   E    +  D    + PA S+    LS  DVYKDLRLRGYDY   F
Sbjct: 948  DSNGSLIASGKVYQWESPDPKLFDTRAAVDPADSTAEFRLSQGDVYKDLRLRGYDYGPFF 1007
Query: 445  RGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKAL 504
            + V +SD +G  G+L W  +W+S++D ML  SIL      LYLPTR   + IDP  H+  
Sbjct: 1008 QLVLESDLEGNRGRLQWNDSWVSFLDAMLHMSILAPGQLGLYLPTRFTSIRIDPVTHRQK 1067
Query: 505  VETLSGDKKTVPVAMYR 521
            + TL    +   V + R
Sbjct: 1068 LYTLQDTTQAADVVVDR 1084
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 Back     alignment and structure
>pdb|2JFK|A Chain A, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa Length = 433 Back     alignment and structure
>pdb|2JFD|A Chain A, Structure Of The Mat Domain Of Human Fas Length = 425 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query521
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 1e-91
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 2e-21
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 9e-05
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 2e-67
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 7e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 9e-10
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 9e-08
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 3e-05
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 1e-07
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 2e-05
3kg6_A285 CURF; polyketide synthase, double hotdog fold, deh 2e-05
3kg9_A296 CURK; polyketide synthase, double hotdog fold, deh 5e-05
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
 Score =  306 bits (784), Expect = 1e-91
 Identities = 166/405 (40%), Positives = 218/405 (53%), Gaps = 20/405 (4%)

Query: 136  AFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLL 195
            AFHS ++    P L   L ++I  PKPRS RW+S+SIPE  W   LA+  S  Y VNNL+
Sbjct: 681  AFHSYFMESIAPTLLRQLRKVILDPKPRSKRWLSTSIPEAQWQGSLARTFSAEYSVNNLV 740

Query: 196  SPVLFYEALQHVPENAVVIEIAPHALLQAIIKR-AKPGAVSIGLTKRGAPDLPAHLLSGL 254
            SPVLF EALQHVP +AVV+EIAPHALLQA++KR  +     I L K+   D     LS +
Sbjct: 741  SPVLFQEALQHVPAHAVVVEIAPHALLQAVLKRSLESSCTIIPLMKKDHRDNLEFFLSNV 800

Query: 255  GKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAG--KGGSRSGEC 312
            G+L+ AG+    N L PPV+FP  RGTP+I   ++WDHS  W V S A    G S S   
Sbjct: 801  GRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQAWDVPSAADFPSGSSCSSVA 860

Query: 313  VIDVDLSKE-EDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIH- 370
            V   D+S E  D YL  H IDGR+LFP TG        L +  S    +E   +  ++  
Sbjct: 861  VYKFDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALS-QNLEETPVVFEDVTL 919

Query: 371  ------------NTNIAGHPYRGEFELCES-GSVAVSGRIRTPEDVSKEQLDLPE-LTPA 416
                        +  +        FE+ +S GS+  SG++   E    +  D    + PA
Sbjct: 920  HQATILPKTGTVSLEVRLLEASHAFEVSDSNGSLIASGKVYQWESPDPKLFDTRAAVDPA 979

Query: 417  ISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFS 476
             S+    LS  DVYKDLRLRGYDY   F+ V +SD +G  G+L W  +W+S++D ML  S
Sbjct: 980  DSTAEFRLSQGDVYKDLRLRGYDYGPFFQLVLESDLEGNRGRLQWNDSWVSFLDAMLHMS 1039

Query: 477  ILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR 521
            IL      LYLPTR   + IDP  H+  + TL    +   V + R
Sbjct: 1040 ILAPGQLGLYLPTRFTSIRIDPVTHRQKLYTLQDTTQAADVVVDR 1084
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} Length = 285 Back     alignment and structure
>3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} Length = 296 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query521
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 100.0
3tzy_A491 Polyketide synthase PKS13; acyltransferase, long f 100.0
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 100.0
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 100.0
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 100.0
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 99.98
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 99.98
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 99.98
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 99.98
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 99.97
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 99.97
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 99.97
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 99.97
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 99.97
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 99.96
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 99.96
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 99.96
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 99.96
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 99.96
3kg8_A308 CURJ; polyketide synthase, double hotdog fold, deh 99.95
3kg9_A296 CURK; polyketide synthase, double hotdog fold, deh 99.95
3kg6_A285 CURF; polyketide synthase, double hotdog fold, deh 99.95
3el6_A313 Erythromycin dehydratase; dehydratase double hotdo 99.94
3kg7_A293 CURH; polyketide synthase, double hotdog fold, deh 99.94
3hrq_A357 PKS, aflatoxin biosynthesis polyketide synthase; h 99.91
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 99.88
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 99.88
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 99.83
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 99.72
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 99.5
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 99.49
3tzy_A491 Polyketide synthase PKS13; acyltransferase, long f 97.82
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 97.71
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 97.69
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 97.69
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 97.53
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 97.52
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 97.46
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 97.45
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 97.45
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 97.42
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 97.42
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 97.4
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 97.39
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 97.34
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 97.11
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 97.11
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 97.1
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 96.99
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 96.94
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 96.53
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 95.99
3esi_A129 Uncharacterized protein; protein from erwinia caro 95.09
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 95.08
4i83_A152 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; 81.05
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 80.15
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
Probab=100.00  E-value=2.2e-67  Score=636.52  Aligned_cols=486  Identities=40%  Similarity=0.659  Sum_probs=388.8

Q ss_pred             CCccCceeEEEEecCchhhhhhcccCCCCCCCCCCCEEEEeCCCChhhHHHHHHhhhcHHHHHHHHHHHHHHhccCCChH
Q psy9440          25 GEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLI  104 (521)
Q Consensus        25 Ge~~a~~~~~~v~~~~~~~l~~~l~~~~~~~~~~~~~~fvf~GqG~~~~~m~~~l~~~p~f~~~~~~~~~~l~~~g~~~~  104 (521)
                      .+.++.||++.+..... +    +..+....+..++++|+|+|||+||+|||++||++|+||+++++|+++++.+|+++.
T Consensus       461 ~~~~~~~r~~~~~~~~~-~----~~~~~~~~~~~~~v~fvF~GQGsQ~~gMg~~L~~~p~f~~~~~~~~~~l~~~g~~l~  535 (2512)
T 2vz8_A          461 SPVAMPFRGYAVLGGEA-G----SQEVQQVPGSKRPVWFICSGMGAQWQGMGLSLMRLDRFRDSILRSDQALKPLGLRVS  535 (2512)
T ss_dssp             CTTTCCEEEEEEESSTT-C----CEEEEECCCSCCCEEEEECCSSCCCTTTTSSTTSSHHHHHHHHHHHHHHGGGTCCHH
T ss_pred             ccccCceeeeeeccCcc-h----hhhhhcccCCCCceEEEeCCCCCchHhHHHHHHhChHHHHHHHHHHHHHHHCCCCHH
Confidence            46678899877776432 2    222222345566899999999999999999999999999999999999999999999


Q ss_pred             HhhccCCCchhhhhhhhHHHHHHHHhhh----------------------------------------------------
Q psy9440         105 PVITSEDADTFEHILNSFVSIAAVQVSE----------------------------------------------------  132 (521)
Q Consensus       105 ~~~~~~~~~~~~~~~~~q~~~~a~q~al----------------------------------------------------  132 (521)
                      +++..++.+.++++.++||++|++|++|                                                    
T Consensus       536 ~~l~~~~~~~l~~~~~~qpal~a~q~al~~ll~~~Gi~P~~vvGHS~GEiaAa~~AG~lsleda~~lv~~Rg~~~~~~~~  615 (2512)
T 2vz8_A          536 DLLLSTDEAVLDDIVSSFVSLTSIQIALIDLLTSLGLQPDGIIGHSLGEVACGYADGCLTQEEAVLSSYWRGYCIKEANV  615 (2512)
T ss_dssp             HHHHTCCHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEecCHhHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcCC
Confidence            9998776667899999999999999999                                                    


Q ss_pred             -------------------------------------------------------------c-ccccchhhHHHHHHHHH
Q psy9440         133 -------------------------------------------------------------N-RHAFHSKYIAEAGPKLR  150 (521)
Q Consensus       133 -------------------------------------------------------------v-~~afHS~~m~~~~~~~~  150 (521)
                                                                                   | ++||||++|+|+.++|+
T Consensus       616 ~~G~M~av~~~~~~~~~~~~~~v~iA~~Nsp~s~visG~~~ai~~~~~~l~~~g~~~~~L~v~~~AfHS~~m~~~~~~~~  695 (2512)
T 2vz8_A          616 LPGAMAAVGLSWEECKQRCPPGIVPACHNSKDTVTISGPQAAMSEFLQQLKREDVFVKEVRTGGIAFHSYFMESIAPTLL  695 (2512)
T ss_dssp             CCEEEEEECSCHHHHHTTSCTTCCEEEECSSSCEEEEEEHHHHHHHHHHHHTTTCCEEEECCTTCCCSSGGGTTTHHHHH
T ss_pred             CCceEEEecCCHHHHHHhccCCeEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCceEEEcCCCCccccHHHHHhHHHHHH
Confidence                                                                         5 68999999999999999


Q ss_pred             HHhcccCCCCCCCCCcEEecCCCCCcCCCCcccCCCchhHhhcCCCceeHHHHHhhcccCCEEEEECCCHhHHHHHHHh-
Q psy9440         151 SSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-  229 (521)
Q Consensus       151 ~~l~~i~~~~~~p~ip~~S~~tg~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~~iEiGP~~~L~~~i~~~-  229 (521)
                      +.++++.+.++.+.+||+|+++|...+........+++||++|+++||+|.++++.+.+..+|||||||++|+++++++ 
T Consensus       696 ~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~fvEiGP~~~L~~~~~~~l  775 (2512)
T 2vz8_A          696 RQLRKVILDPKPRSKRWLSTSIPEAQWQGSLARTFSAEYSVNNLVSPVLFQEALQHVPAHAVVVEIAPHALLQAVLKRSL  775 (2512)
T ss_dssp             HHHHHHSCSCCBCCTTEECSSSCGGGTTSSSTTBCCHHHHHHHHHSCEEHHHHHTTSCSSCEEEECSSSCTTHHHHHHHS
T ss_pred             HHHHhccccCCCCCceEEEeecCCCcccCcccccCCHHHHHHHhhccccHHHHHHhhhcCCEEEEECCcHHHHHHHHHHh
Confidence            9999987654457889999999876432222345789999999999999999999998888999999999999999999 


Q ss_pred             CCCceEEeccCCCCCChHHHHHhhhhhhhhcCCCCCccccCCCCCCCCCCCCccCCCCCCCCCccccccCCcCCCCCC--
Q psy9440         230 KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVASFAGKGGS--  307 (521)
Q Consensus       230 ~~~~~~~~sl~r~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~p~~~~~~~~LP~y~~~~~~~W~~~~~~~~~~~--  307 (521)
                      ..+..++++++|+..++.+++++++|+||+.|++|||..+++...+|..+.+++.||+|||||++||.++........  
T Consensus       776 ~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~lP~y~~~~~~~w~~~~~~~~~~~~~  855 (2512)
T 2vz8_A          776 ESSCTIIPLMKKDHRDNLEFFLSNVGRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQAWDVPSAADFPSGSS  855 (2512)
T ss_dssp             CTTSEEECSCCTTCSCHHHHHHHHHHHHHHHTCCCCGGGTSCCCCSSCCTTCCCSGGGCCCCCCSCCCCCCGGGSCCSCC
T ss_pred             ccCCcEEeeccCCCCCHHHHHHHHHHHHHHCCCcCCHHHhCCccccCccCCCcCCCCCCCCCCcccccCcccccccCCCC
Confidence            667889999998745789999999999999999999999998765555555677899999999999998753221111  


Q ss_pred             CCCcceEEEEccccC-cccccCceecCeeeeccccHHHHHHHHHHhh-c----CCCeeecccccccccccccee------
Q psy9440         308 RSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEEAVEHFLQKI-E----SIPRDDEFIALLHEIHNTNIA------  375 (521)
Q Consensus       308 ~~~~~~~~~~l~~~~-~p~L~dH~v~g~~i~Paa~yle~a~eA~~~~-~----~~~~~l~dv~~~~~~~~pl~~------  375 (521)
                      ......|..+++.++ +|||.||+|+|++||||++|++|+++|+.+. .    ..++.|+|+    .|.+|++.      
T Consensus       856 ~~~~~~~~~~~~~~~~~~wl~~H~v~g~~~~P~~~y~~~a~~a~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~  931 (2512)
T 2vz8_A          856 CSSVAVYKFDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALSQNLEETPVVFEDV----TLHQATILPKTGTV  931 (2512)
T ss_dssp             CTTEEEEEEECSTTSGGGGGGGCEETTEEECCHHHHHHHHHHHHHHHTTCCGGGCCEEEEEE----EECSCCEECSSSEE
T ss_pred             CCceEEEEEEcccccCCchhccCeECCEEeeCcHHHHHHHHHHHHHhhccccccCCeEEEee----EEeeceeecCCCCE
Confidence            123456677777667 8999999999999999999999999998876 1    246899999    99999971      


Q ss_pred             -----ccCcceeEEEEe-CCeEEEEEEEEcCCCCCcccCCCCCCCc-ccccccccCCHHHHHHHHHHcCCCcCccccccc
Q psy9440         376 -----GHPYRGEFELCE-SGSVAVSGRIRTPEDVSKEQLDLPELTP-AISSEMLELSSADVYKDLRLRGYDYSGAFRGVS  448 (521)
Q Consensus       376 -----~~~~~~~f~i~s-~~~~h~~G~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~l~~~Gl~yG~~Fr~l~  448 (521)
                           .......|+|++ .|+.||+|++..........++....+. ....+...++.+++|+.|+..|++|||.||+++
T Consensus       932 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~g~~yg~~F~~~~ 1011 (2512)
T 2vz8_A          932 SLEVRLLEASHAFEVSDSNGSLIASGKVYQWESPDPKLFDTRAAVDPADSTAEFRLSQGDVYKDLRLRGYDYGPFFQLVL 1011 (2512)
T ss_dssp             EEEEEEETTTTEEEEEETTCCEEEEEEEEECSSCCGGGGCCCCSSCCCCCSSSCEEEHHHHHHHHHHHTCCCCGGGCCEE
T ss_pred             EEEEEEEcCCceEEEecCCCcEEEEEEEEecCCCCccccccccccccccccccccCCHHHHHHHHHHhcCcCCchhcCee
Confidence                 123446799998 8999999999765433222222111000 112334567889999999999999999999999


Q ss_pred             ccccCCceeEEEecCCchhhHHHHHHHHHhhhcCCceeccceeeEEEEecchhhHHHHhhCCCcccceeee
Q psy9440         449 QSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAM  519 (521)
Q Consensus       449 ~~~~~~~~a~~~~~~~hP~lLD~~~q~~~~~~~~~~~~lP~~i~~l~i~~~~~~~~~~~~~~~~~~~~~~~  519 (521)
                      +++.++..+++.++..||++||+|+|+.++.......++|++|++++|++..+.....+...+....++.+
T Consensus      1012 ~~~~~~~~~~~~~~~~~~~~lD~~lq~~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1082 (2512)
T 2vz8_A         1012 ESDLEGNRGRLQWNDSWVSFLDAMLHMSILAPGQLGLYLPTRFTSIRIDPVTHRQKLYTLQDTTQAADVVV 1082 (2512)
T ss_dssp             EEETTSSEEEEEECSCHHHHHHHHHHHHHTCTTCCSCEEECBCSCCEECHHHHHHHCEECSSSCEEEEEEE
T ss_pred             eEEEcCceEEEecCCccchHHHHHHHHHHHhccCCcceecceEeEEEEecCCccceeEeccCCCceeEEEE
Confidence            99988888889999899999999999988766666789999999999998776544333233333344443
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula} Back     alignment and structure
>3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} Back     alignment and structure
>3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} Back     alignment and structure
>3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} Back     alignment and structure
>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.77A {Lyngbya majuscula} Back     alignment and structure
>3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum} Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis} Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 521
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 1e-13
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 6e-10
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

 Score = 68.3 bits (166), Expect = 1e-13
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 64/231 (27%)

Query: 63  YVFSGMGSQWAGMVKGLL-HIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNS 121
           +VF G GSQ  GM+  +    P+ +++  +++ AL    +DL  +     A+       +
Sbjct: 4   FVFPGQGSQTVGMLADMAASYPIVEETFAEASAALG---YDLWALTQQGPAEELNKTWQT 60

Query: 122 FVSIAAVQVSENRH---------------------------------------------- 135
             ++    V+  R                                               
Sbjct: 61  QPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQ 120

Query: 136 ------AFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAY 189
                   H   +  A  KL   L +I       +   +++   +          +    
Sbjct: 121 EAVPEVPSHCALMKPAADKLAVELAKI--TFNAPTVPVVNNVDVKCETNG----DAIRDA 174

Query: 190 HVNNLLSPVLFYEALQHVPENAV--VIEIAPHALLQAIIKRAKPGAVSIGL 238
            V  L +PV + ++++++    V  + E+ P  +L  + KR      +  L
Sbjct: 175 LVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASAL 225
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query521
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 99.98
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 99.97
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 96.93
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 96.34
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=3.8e-33  Score=262.12  Aligned_cols=167  Identities=18%  Similarity=0.274  Sum_probs=149.7

Q ss_pred             CEEEEeCCCChhhHHHHHHhhh-cHHHHHHHHHHHHHHhccCCChHHhhccCCCchhhhhhhhHHHHHHHHhhh------
Q psy9440          60 PVWYVFSGMGSQWAGMVKGLLH-IPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVSIAAVQVSE------  132 (521)
Q Consensus        60 ~~~fvf~GqG~~~~~m~~~l~~-~p~f~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~q~~~~a~q~al------  132 (521)
                      +++|+|+|||+||+|||++|++ +|.||+.+++|++++   |+++.+.+..++.+.++++.+.||++|++++++      
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l---~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~   77 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAAL---GYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQ   77 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHh---CCCHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999996 999999999999987   678888887777778899999999999999998      


Q ss_pred             ----------------------------------------------cccccchhhHHHHHHHHHHHhcccCCCCCCCCCc
Q psy9440         133 ----------------------------------------------NRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSAR  166 (521)
Q Consensus       133 ----------------------------------------------v~~afHS~~m~~~~~~~~~~l~~i~~~~~~p~ip  166 (521)
                                                                    ...||||++|+++.++|++.++++.++.  |++|
T Consensus        78 ~~g~~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~~~~pfHs~~m~~~~~~~~~~l~~v~~~~--p~~p  155 (235)
T d1mlaa1          78 QGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEVPSHCALMKPAADKLAVELAKITFNA--PTVP  155 (235)
T ss_dssp             TTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSCTSCTTSGGGHHHHHHHHHHHHTSCCCC--CSSC
T ss_pred             hcCCCceeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcCCCCcchhHHhhhhHHHHHHHHhcCCCCC--Ccce
Confidence                                                          5679999999999999999999999988  9999


Q ss_pred             EEecCCCCCcCCCCcccCCCchhHhhcCCCceeHHHHHhhccc--CCEEEEECCCHhHHHHHHHhCCCceE
Q psy9440         167 WISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPE--NAVVIEIAPHALLQAIIKRAKPGAVS  235 (521)
Q Consensus       167 ~~S~~tg~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~--~~~~iEiGP~~~L~~~i~~~~~~~~~  235 (521)
                      ++||++|+.+.    +....++||++|+++||+|.++++.+.+  .++|||||||++|++++|++.++...
T Consensus       156 viS~~tg~~~~----~~~~~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~i~~~~~~  222 (235)
T d1mlaa1         156 VVNNVDVKCET----NGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTA  222 (235)
T ss_dssp             BBCTTTCCBCC----SHHHHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTTCEE
T ss_pred             EEeCCCCCCCC----CHHHHHHHHHHhccCCccHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCCCCc
Confidence            99999999872    2333479999999999999999999986  78999999999999999998433333
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure