Psyllid ID: psy9452

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------179
RLLTRNEVSNDVNNEASNGSPATTVNSPESDSTLSNELNDKVNAPIEGSSTVPSLEATSVSSDQTPDKETSSNEIVSDANSPIVPEHEIPMDVLTDDHHDDGMTDIESDPTGDLAITPEEHETSESDENETGVTAEDVNESPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLCCPAYACDGPLTPALQSDSQVSVATEQTNGDQPTETIAISSATEAPVSDSSEVTSDLQNEVTSNNVEDSQSSVSGQSNNSPVEDAQVSSSTAVNIVETNAESSTSGPVSAESDSSPISNESAAPLEQTNDVISDQSIEKESTTEALTHQDSTANADQPISSQSEEQAEVETSTPVSSQDATTNELNSDVSQDADQTVQSSTDPSVSGSTSANAESSQDQTEGSTSASVLNEETTVNNQLTSDRIGDQAASEASTAAVGESQSANTEQESSTGQPISADENTEVESSTAITGAQSNDAEQTLVQSENDLGSSTPTAEISESPSVNVEQPSQDIQTVETSTAVSQDASLNVQETVAPSEDQTVESETSTQGVQDAVITNEELNTESPIVNQDSPVGNEQSESQDQTTNSDSIEPINQGTTANPNVNIESTSVNADPAINSDPSSIPEQVSSDNHEEPTQTNQPETSSADETSSNQQGESTVGADQPADVQDQTVNVNQGESTTLSNNVSEGEAPNADQSEVENNQPIDNESVTTIPTQNEQTIGQSDVAVDEDTNASIDQDKPSSEEIEVTTALPVQSEPNSDNKISAGAQEDTLTEASTSSNVQDVDQTSASQSTLASDSLTNDGTVSSENSVGDSTTAVPVQSEQTVEQDVSQNEAQAGESESTTPLANDQTGQVVDAQSVGESDLSEADSDASSAVGETDTDMVSPHENDIQQTENEGTTALPVQQETINQDQSTSQDSESSTASSSQPQEDAVNASETSESQDQATSSPNADQQSENLTTSSLSGQSESADAQQPSETETTSNNEITSSDSESDKVSENDSTTIASLQSEAIANEEQSVSPSEDVPNSGDETSTATITNESVPEGDQPSVDQSIGTDDIVQQTSDQTADSESSTASADQLEVVSEGEPNKVQAEGTEIPTSQDAEQLSNSESTTSIPSQSDVENEQQTSQDGGQAGETESSTSVPSPSEHQIEGDQHTVDSQSTEPSIGQENDHNIADSTTVIPSESAPLEIEETTSQHSDQAIDTESSTAVSSQSEPQAEGDQPISQDGQVNSIDSTTVIPSESVPVENEEPASQDANQDIGTESSTAEPSQSEPQGEGEQSNVESQSTEGAEQSVGQDVNEAAVETESSTVVSGQSEPQVEDQPNVEPQATEGEPISQDANQGEIEATTAIPAENVEPSSQDVVPAGETENQTPATIASDSLVEEQPNVEQPQTEGSDQPISQGADQITDSESTTALPSQSDSQVGEQQNIDEAQLTEEQETSNDNQVSSTEPTNDASSQSVLAENEQSISQDAEQVNEPDSTTQLPSQSVEDEQPIVEQSQTTGDAEQPVSQEAESSTSQSEPQVEAEQPNLEQTQTEDAQPIAQSADQEGISEATTALPSQSVSTENEQPINTEVVSETESPVQSEPQTEGEQTVVDQTQLTEGTEQDADQVSNSEPTTVTSQSALVENEQPSSQDSGQVGETESSTVVSSQSEPQVEGEQPIVNQPQAVEGADQTITQNADEVSGVEATTSIISHSETSDAQPNDSNVSVSEESNLDSTTVNVQAEPSGVESATSVPSQSDIPQEPASAEDTLDTQAQH
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
rlltrnevsndvnneasngspattvnspesdstlsnelndkvnapiegsstvpsleatsvssdqtpdketssneivsdanspivpeheipmdvltddhhddgmtdiesdptgdlaitpeehetsesdenetgvtaedvnespangdciidgqlhsnnsrietknpchvqclcvngapsceslecpppppthrncmpihpgpdlccpayacdgpltpalqsdsqvsvateqtngdqptetiaissateapvsdssevTSDLQnevtsnnvedsqssvsgqsnnspvedaqvssSTAVNIVEtnaesstsgpvsaesdsspisnesaapleqtndvisdqsiekesttealthqdstanadqpissqseeqaevetstpvssqdattnelnsdvsqdadqtvqsstdpsvsgstsanaessqdqtegstsasvlneettvnnqltsdrigdqaaseastaavgesqsanteqesstgqpisadentevesstaitgaqsndaEQTLVQSendlgsstptaeisespsvnveqpsqdiqtVETSTAVsqdaslnvqetvapsedqtvesetstqgVQDAVItneelntespivnqdspvgneqsesqdqttnsdsiepinqgttanpnvniestsvnadpainsdpssipeqvssdnheeptqtnqpetssadetssnqqgestvgadqpadvqdqtvnvnqgesttlsnnvsegeapnadqsevennqpidnesvttiptqneqtigqsdvavdedtnasidqdkpsseeievttalpvqsepnsdnkisagaqedtlteastssnvqdvdqtsasqstlasdsltndgtvssensvgdsttavpvqseqtVEQDVSQNeaqagesesttplandqtgqvvdaqsvgesdlseadsdassavgetdtdmvsphendiqqtenegttalpvqqetinqdqstsqdsesstasssqpqedavnasetsesqdqatsspnadqqsenlttsslsgqsesadaqqpsetettsnneitssdsesdkvsendsTTIASLQSEaianeeqsvspsedvpnsgdetstatitnesvpegdqpsvdqsigtddivqqtsdqtadsesstasadqlevvsegepnkvqaegteiptsqdaeqlsnsesttsipsqsdveneqqtsqdggqagetesstsvpspsehqiegdqhtvdsqstepsigqendhniadsttvipsesapleieettsqhsdqaidtesstavssqsepqaegdqpisqdgqvnsidsttvipsesvpveneepasqdanqdigtesstaepsqsepqgegeqsnvesqstegaeqsvgqdvnEAAVEtesstvvsgqsepqvedqpnvepqategepisqdanqgeieattaipaenvepssqdvvpagetenqtpatiasdslveeqpnveqpqtegsdqpisqgadqitdsesttalpsqsdsqvgeqqnideaqlteeqetsndnqvssteptndassqsVLAENEQsisqdaeqvnepdsttqlpsqsvedeqpiveqsqttgdaeqpvsqeaesstsqsepqveaeqpnleqtqtedaqpiaqsadqegiseattalpsqsvsteneqpintevvsetespvqsepqtegeqtvvdqtqltegteqdadqvsnsepttvtsqsalveneqpssqdsgqvgetesstvvssqsepqvegeqpivnqpqavegadqtitqnadevsgveATTSiishsetsdaqpndsnvsvseesnldsttvnvqaepsgvesatsvpsqsdipqepasaedtldtqaqh
rlltrnevsndvnneasngspattvnspeSDSTLSNELNDKVNAPIegsstvpsleatsvssdqtpdketssneivsdanspivpehEIPMDVLTDDHHDDGMTDIESDPTGDLAITpeehetsesdenetgvtAEDVNESPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLCCPAYACDGPLTPALQSDSQVSVATEQTNGDQPTETIAISSateapvsdsSEVTSDLQNEVTsnnvedsqssvsgqsnnspvedAQVSSSTAVNIVEtnaesstsgpvsAESDSSPISNESAAPLEQTNDVISDQSIEKESTTEalthqdstanadqpisSQSEEQAEVEtstpvssqdatTNELNSDVSQDADQTVqsstdpsvsgstsanaessqdqtegstsasvlneETTVNNQLTSDRIGDQAASEASTaavgesqsanteqesstgqpisadentEVESSTAITGAQSNDAEQTLVQSENDLGSStptaeisespsvnveqpsqDIQTVETSTAVSQDASLNVQEtvapsedqtvesetstqgvQDAVITneelntespivnqdspvgNEQSESQDQTTNSDSIEPINQGTTANPNVNIESTSVNADPAINSDPSSIPEQVSSDNHEEPTQTNQPETSSADETSSNQQGESTVGADQPADVQDQTVNVNQGESTTLSNNVSEGEAPNADQSEVENNQPIDNESvttiptqneqtigqsdvavdEDTNasidqdkpsseeIEVTtalpvqsepnsdNKISAGAQEDTLTeastssnvqdvdqtSASQStlasdsltndgtVSSENSVGDSTTAVPVQSEQTVEQDVSQNEAQAgesesttplandqtgQVVDAQSVGESDLSEADSDASSAVGETDTDMVSPHENDIQQTENEGTTALPVQQETInqdqstsqdsesstasssqpqeDAVNASETSESQDqatsspnadqqsENLTTSSLSGqsesadaqqpsetettsnneitssdsesdkvseNDSTTIASLQSeaianeeqsvspsedvpnsgDETSTatitnesvpegdqPSVDQSIGTDDIVQQTSDqtadsesstasadqlevvsegepnkvqaegteiptsqdaeqlsnSESTtsipsqsdveNEQQTSQDGGQAGETESSTSVPSPSEHQIEGDQHTVDSQSTEPSIGQENDHNIADSTTVIPSESAPLEIEETTSQHSDQAIDTESSTAVSSQSEPQAegdqpisqdgqvnsIDSTTVIPSESVPVENEEPASQDANQDIGTESStaepsqsepqgegEQSNVESQSTEGAEQSVGQDVNEAAVETESstvvsgqsepqvedQPNVEPQATEGEPISQDANQGEIEATTAIPAENVEPSSQDVVPAGETENQTPATIASDSLVEEQPNVEqpqtegsdqpiSQGADQITDSESTTalpsqsdsqvgEQQNIDEAQLteeqetsndnqvssteptnDASSQSVLAENEQSISQDAEQVNEPDSTTQLPSQSVEDEQPIVEQSQTTGDAEQPVSQEAESSTSQSEPQVEAEQPNLEQTQTEDAQPIAQSADQEGISEATtalpsqsvsteneqPINTEVVsetespvqsepqtegeqtvVDQTQLTEgteqdadqvsnsePTTVTSQSalveneqpssqdsgqvgeTESSTVVSsqsepqvegeqPIVNQPQAVEGADQTITQNADEVSGVEATTSIIshsetsdaqpndsNVSVSEESNLDSTTVNVQAepsgvesatsvpsqsdipqepasaedtldtqaqh
RLLTRNEVSNDVNNEASNGSPATTVNSPESDSTLSNELNDKVNAPIEGSSTVPSLEATSVSSDQTPDKETSSNEIVSDANSPIVPEHEIPMDVLTDDHHDDGMTDIESDPTGDLAITPeehetsesdenetGVTAEDVNESPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGApsceslecpppppTHRNCMPIHPGPDLCCPAYACDGPLTPALQSDSQVSVATEQTNGDQPTETIAISSATEAPVSDSSEVTSDLQNEVTSNNVEDsqssvsgqsnnsPVEDAQVSSSTAVNIVETNAESSTSGPVSAESDSSPISNESAAPLEQTNDVISDQSIEKESTTEALTHQDSTANADQPISSQSEEQAEVETSTPVSSQDATTNELNSDVSQDADQTVQsstdpsvsgstsANAESSQDQTEGSTSASVLNEETTVNNQLTSDRIGDQAASEASTAAVGESQSANTEQESSTGQPISADENTEVESSTAITGAQSNDAEQTLVQSENDLGSSTPTAEISESPSVNVEQPSQDIQTVETSTAVSQDASLNVQETVAPSEDQTVESETSTQGVQDAVITNEELNTESPIVNQDSPVGNEQSESQDQTTNSDSIEPINQGTTANPNVNIESTSVNADPAINSDPSSIPEQVSSDNHEEPTQTNQPETSSADETSSNQQGESTVGADQPADVQDQTVNVNQGESTTLSNNVSEGEAPNADQSEVENNQPIDNESVTTIPTQNEQTIGQSDVAVDEDTNASIDQDKPSSEEIEVTTALPVQSEPNSDNKISAGAQEDTLTEASTSSNVQDVDQTSASQSTLASDSLTNDGTVSSENSVGDSTTAVPVQSEQTVEQDVSQNEAQAGESESTTPLANDQTGQVVDAQSVGesdlseadsdassaVGETDTDMVSPHENDIQQTENEGTTALPVQQETINqdqstsqdsesstasssqpqeDAVNASETSESQDQATSSPNADQQSENLTTSSLSGQSESADAQQPsetettsnneitssdsesdKVSENDSTTIASLQSEAIANEEQSVSPSEDVPNSGDETSTATITNESVPEGDQPSVDQSIGTDDIVqqtsdqtadsesstasadqLEVVSEGEPNKVQAEGTEIPTSQDAEQLSNSESTTSIPSQSDVENEQQTSQDGGQAGetesstsvpspseHQIEGDQHTVDSQSTEPSIGQENDHNIADSTTVIPSESAPLEIEETTSQHSDQAIDTESSTAVSSQSEPQAEGDQPISQDGQVNSIDSTTvipsesvpveneepasQDANQDIGTESSTAEPSQSEPQGEGEQSNVESQSTEGAEQSVGQDVNEAAVETESSTVVSGQSEPQVEDQPNVEPQATEGEPISQDANQGEIEATTAIPAENVEPSSQDVVPAGETENQTPATIASDSLVEEQPNVEQPQTEGSDQPISQGADQITDSESTTALPSQSDSQVGEQQNIDEAQLTEEQETSNDNQVSSTEPTNDASSQSVLAENEQSISQDAEQVNEPDSTTQLPSQSVEDEQPIVEQSQTTGDAEQPVsqeaesstsqsepqVEAEQPNLEQTQTEDAQPIAQSADQEGISEATTALPSQSVSTENEQPINTEVVSETESPVQSEPQTEGEQTVVDQTQLTEGTEQDADQVSNSEPTTVTSQSALVENEQPSSQDSGqvgetesstvvssqsepqvegeqpIVNQPQAVEGADQTITQNADEVSGVEATTSIISHSETSDAQPNdsnvsvseesnldsTTVNVQAEPSGVESATSVPSQSDIPQEPASAEDTLDTQAQH
**************************************************************************************************************************************************CIIDGQL******IETKNPCHVQCLCVNG************************GPDLCCPAYACDGP****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
***************************************************************************************************************************************************IIDGQLHS**********CHV*CLCVN*AP*************************LC*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
************************************ELNDKVNAPIEGSSTVP***********************SDANSPIVPEHEIPMDVLTDDHHDDGMTDIESDPTGDLAITP*******************VNESPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLCCPAYACDGPLTPAL*****************PTETIAISS*************************************************TAVNIVET************************APLEQTNDVISD*********************************************************************************************VLNEETTVNNQLTSDRI********************************************ITGAQSNDAEQTLVQ*****************************************ASLNVQ*******************VQDAVITNEELNTESPIVNQD******************SIEPINQGTTANPNVNIESTSVNADPAINSDP******************************************QPADVQDQTVNVNQGEST******************VENNQPIDNESVTTIPTQNEQTIGQSDVAVDE*****************VTTALPVQSEPNSDNKISAGAQE***************************************************************************************************************TDMVSPHENDIQQTENEGTTALPVQQE************************************************************************************************TIASLQSEAI***************************************QSIGTDDIV*****************************KVQAEGTE***********************************************************************GQENDHNIADSTTVIPSESAPLE************************************QDGQVNSIDSTTVIPSE*********************************************************************************************ISQDANQGEIEATTAIPAENVEPSSQDVVPAGETENQTPATIASDSLV**********************************************NIDEAQL******************************************************************************************************************************************************************DQTQLTE*********************************************************QPIVNQPQAVEGADQTITQNADEVSGVEATTSIISH****************************************************************
*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
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RLLTRNEVSNDVNNEASNGSPATTVNSPESDSTLSNELNDKVNAPIEGSSTVPSLEATSVSSDQTPDKETSSNEIVSDANSPIVPEHEIPMDVLTDDHHDDGMTDIESDPTGDLAITPEEHETSESDENETGVTAEDVNESPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLCCPAYACDGPLTPALQSDSQVSVATEQTNGDQPTETIAISSATEAPVSDSSEVTSDLQNEVTSNNVEDSQSSVSGQSNNSPVEDAQVSSSTAVNIVETNAESSTSGPVSAESDSSPISNESAAPLEQTNDVISDQSIEKESTTEALTHQDSTANADQPISSQSEEQAEVETSTPVSSQDATTNELNSDVSQDADQTVQSSTDPSVSGSTSANAESSQDQTEGSTSASVLNEETTVNNQLTSDRIGDQAASEASTAAVGESQSANTEQESSTGQPISADENTEVESSTAITGAQSNDAEQTLVQSENDLGSSTPTAEISESPSVNVEQPSQDIQTVETSTAVSQDASLNVQETVAPSEDQTVESETSTQGVQDAVITNEELNTESPIVNQDSPVGNEQSESQDQTTNSDSIEPINQGTTANPNVNIESTSVNADPAINSDPSSIPEQVSSDNHEEPTQTNQPETSSADETSSNQQGESTVGADQPADVQDQTVNVNQGESTTLSNNVSEGEAPNADQSEVENNQPIDNESVTTIPTQNEQTIGQSDVAVDEDTNASIDQDKPSSEEIEVTTALPVQSEPNSDNKISAGAQEDTLTEASTSSNVQDVDQTSASQSTLASDSLTNDGTVSSENSVGDSTTAVPVQSEQTVEQDVSQNEAQAGESESTTPLANDQTGQVVDAQSVGESDLSEADSDASSAVGETDTDMVSPHENDIQQTENEGTTALPVQQETINQDQSTSQDSESSTASSSQPQEDAVNASETSESQDQATSSPNADQQSENLTTSSLSGQSESADAQQPSETETTSNNEITSSDSESDKVSENDSTTIASLQSEAIANEEQSVSPSEDVPNSGDETSTATITNESVPEGDQPSVDQSIGTDDIVQQTSDQTADSESSTASADQLEVVSEGEPNKVQAEGTEIPTSQDAEQLSNSESTTSIPSQSDVENEQQTSQDGGQAGETESSTSVPSPSEHQIEGDQHTVDSQSTEPSIGQENDHNIADSTTVIPSESAPLEIEETTSQHSDQAIDTESSTAVSSQSEPQAEGDQPISQDGQVNSIDSTTVIPSESVPVENEEPASQDANQDIGTESSTAEPSQSEPQGEGEQSNVESQSTEGAEQSVGQDVNEAAVETESSTVVSGQSEPQVEDQPNVEPQATEGEPISQDANQGEIEATTAIPAENVEPSSQDVVPAGETENQTPATIASDSLVEEQPNVEQPQTEGSDQPISQGADQITDSESTTALPSQSDSQVGEQQNIDEAQLTEEQETSNDNQVSSTEPTNDASSQSVLAENEQSISQDAEQVNEPDSTTQLPSQSVEDEQPIVEQSQTTGDAEQPVSQEAESSTSQSEPQVEAEQPNLEQTQTEDAQPIAQSADQEGISEATTALPSQSVSTENEQPINTEVVSETESPVQSEPQTEGEQTVVDQTQLTEGTEQDADQVSNSEPTTVTSQSALVENEQPSSQDSGQVGETESSTVVSSQSEPQVEGEQPIVNQPQAVEGADQTITQNADEVSGVEATTSIISHSETSDAQPNDSNVSVSEESNLDSTTVNVQAEPSGVESATSVPSQSDIPQEPASAEDTLDTQAQH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1789
380013882 3241 PREDICTED: uncharacterized protein LOC10 0.042 0.023 0.481 6e-19
350412375 3430 PREDICTED: hypothetical protein LOC10074 0.046 0.024 0.457 4e-18
383857018 3812 PREDICTED: uncharacterized protein LOC10 0.044 0.020 0.433 2e-17
340712191 3385 PREDICTED: hypothetical protein LOC10064 0.042 0.022 0.457 2e-17
328699649 3382 PREDICTED: hypothetical protein LOC10016 0.039 0.020 0.458 3e-17
307188209 3229 hypothetical protein EAG_11334 [Camponot 0.042 0.023 0.457 2e-16
332022708 2937 hypothetical protein G5I_08668 [Acromyrm 0.108 0.066 0.339 4e-16
91090940 2645 PREDICTED: similar to tenebrin [Triboliu 0.053 0.036 0.431 5e-15
307193672 3194 hypothetical protein EAI_02827 [Harpegna 0.041 0.023 0.445 4e-14
40950477 3455 tenebrin [Tenebrio molitor] 0.038 0.019 0.454 8e-14
>gi|380013882|ref|XP_003690974.1| PREDICTED: uncharacterized protein LOC100872118 [Apis florea] Back     alignment and taxonomy information
 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 54/83 (65%)

Query: 142  PANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGP 201
            P  G+C+++GQ +SNNS I   NPC + C CV+    C+ ++CPPPP    NCMP+H G 
Sbjct: 1751 PGEGNCLVEGQSYSNNSAIPPSNPCQLGCRCVSSIIQCDLVQCPPPPNHLSNCMPLHIGK 1810

Query: 202  DLCCPAYACDGPLTPALQSDSQV 224
            D CCP YACD   T  L+SD+ +
Sbjct: 1811 DSCCPMYACDSTPTAGLESDNHM 1833

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350412375|ref|XP_003489624.1| PREDICTED: hypothetical protein LOC100746973 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383857018|ref|XP_003704003.1| PREDICTED: uncharacterized protein LOC100877061 [Megachile rotundata] Back     alignment and taxonomy information
>gi|340712191|ref|XP_003394647.1| PREDICTED: hypothetical protein LOC100648429 [Bombus terrestris] Back     alignment and taxonomy information
>gi|328699649|ref|XP_001952422.2| PREDICTED: hypothetical protein LOC100162489 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307188209|gb|EFN73041.1| hypothetical protein EAG_11334 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332022708|gb|EGI62985.1| hypothetical protein G5I_08668 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|91090940|ref|XP_974469.1| PREDICTED: similar to tenebrin [Tribolium castaneum] gi|270014023|gb|EFA10471.1| hypothetical protein TcasGA2_TC012717 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307193672|gb|EFN76355.1| hypothetical protein EAI_02827 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|40950477|gb|AAR97872.1| tenebrin [Tenebrio molitor] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1789
UNIPROTKB|Q939N5 3072 gspB "Platelet binding protein 0.860 0.500 0.189 4.5e-69
FB|FBgn0036181 3135 Muc68Ca "Mucin 68Ca" [Drosophi 0.950 0.542 0.200 1.3e-58
FB|FBgn00532651799 Muc68E "Mucin 68E" [Drosophila 0.765 0.761 0.216 2.4e-54
FB|FBgn00362031514 Muc68D "Mucin 68D" [Drosophila 0.600 0.710 0.213 1.1e-48
UNIPROTKB|E2RYF6 1773 MUC22 "Mucin-22" [Homo sapiens 0.758 0.765 0.206 7.4e-43
WB|WBGene00019435 2232 K06A9.1 [Caenorhabditis elegan 0.944 0.757 0.201 7.8e-43
FB|FBgn005258016 Muc14A "Mucin 14A" [Drosophila 0.837 93.62 0.204 2.5e-39
CGD|CAL00038741404 PGA55 [Candida albicans (taxid 0.470 0.599 0.202 4.5e-39
UNIPROTKB|Q59SG91404 PGA55 "Flocculin-like protein" 0.470 0.599 0.202 4.5e-39
UNIPROTKB|Q9NZW41301 DSPP "Dentin sialophosphoprote 0.649 0.893 0.178 1.1e-38
UNIPROTKB|Q939N5 gspB "Platelet binding protein GspB" [Streptococcus gordonii (taxid:1302)] Back     alignment and assigned GO terms
 Score = 728 (261.3 bits), Expect = 4.5e-69, Sum P(2) = 4.5e-69
 Identities = 301/1588 (18%), Positives = 583/1588 (36%)

Query:   220 SDSQVSVATEQTNGDQPTETIAISSATEAPVSDSSEVTSDLQNEVTSNNVEDXXXXXXXX 279
             S +  SV+  +++    + + + S++T A VS +SE  S   +E  S +           
Sbjct:  1117 SSTSASVSASESSSTSASVSASESASTSASVS-ASESASTSASESASESASTSASVSASE 1175

Query:   280 XXXXPVE-DAQVSSSTAVNIVETNAESSTSGPVSAESDSSPISNESAAPLEQTNDVISDQ 338
                      A  S+ST+ + V  +   STS  VSA   +S  ++ SA+  E  +   S+ 
Sbjct:  1176 SASTSASVSASESASTSAS-VSASESVSTSASVSASESASTSASVSAS--ESASTSASES 1232

Query:   339 SIEKESTTEALTHQDSTANADQPISSQSEE-QAEVETSTPVSSQDATTNELNSDVSQDAD 397
             + E  ST+ +++  +S + +    +S+S    A V  ST  S+  + +   ++  S    
Sbjct:  1233 ASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESASTSASVS 1292

Query:   398 QTVQXXXXXXXXXXXXANAESSQDQTEG-STSASV-LNEETTVNNQLTSDRIGDQAASEA 455
              +              A+  +S   +E  STSASV  +E  + +  +++      +ASE+
Sbjct:  1293 ASESASTSASVSASESASTSASVSASESVSTSASVSASESASTSASVSASESASTSASES 1352

Query:   456 STAAVGESQSANTEQESSTGQPISADENTEVESSTAITGAQSNDAEQTLVQSENDLGSST 515
             ++ +   S S +  + +ST   +SA E+    +S + + + S  A  +  +S +   S +
Sbjct:  1353 ASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESASTSASVS 1412

Query:   516 PTAEISESPSVNVEQPSQDIQTVETSTAVSQDASLNVQETVAPSEDQTVESETSTQGVQD 575
              +   S S SV+  + +    +V  ST+ S  AS++  E+ + S   +  +  ST     
Sbjct:  1413 ASESASTSASVSASESASTSASVSASTSASTSASVSASESASTSTSVSTSTSASTSA--- 1469

Query:   576 AVITNEELNTESPIVNQDSPVGNEQSESQDQTTNSDSIEPINQGTTANPNVNIESTSVNA 635
             +V  +E  +T + +   +S   +    +    + S S+      +T+      ES S +A
Sbjct:  1470 SVSASESASTSASVSASESASTSASVSASTSASTSASVSASESASTSASVSASESASTSA 1529

Query:   636 DPAINSDPSSIPEQVSSDNHEEPTQTNQPETSSADETS-SNQQGESTVGADQPADVQDQT 694
               +  S+ +S    VS+      + +    TS++   S S  +  ST  +   ++    +
Sbjct:  1530 SVSA-SESASTSASVSASESASTSASVSASTSASTSASVSASESASTSASVSASESASTS 1588

Query:   695 VNVNQGESTTLSNNVSEGEAPNADQSEVENNQPIDNESVTTIPTQNEQTIGQSDVAVDED 754
              +V+  ES + S +VS  E+ +   S   +     + SV+   +++  T      +    
Sbjct:  1589 ASVSASESASTSASVSASESASTSASVSASESASTSASVSA--SESASTSASVSASESAS 1646

Query:   755 TNASIDQDKPSSEEIEVTTA--LPVQSEPNSDNKISAGAQEDTLTEASTSSNVQDVDQTS 812
             T+AS+   + +S    V+ +      +  ++    S  A       ASTS++V   +  S
Sbjct:  1647 TSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAS 1706

Query:   813 ASQSTLASDSLTNDGTVSSENSVGDSTTAVPVQSEQTVEQDVSQNEAQAGESESTTPLAN 872
              S S  AS+S +   +VS+  S   S +    +S  T    VS +E+ A  S S +   +
Sbjct:  1707 TSASVSASESASTSASVSASESASTSASVSASESAST-SASVSASES-ASTSASVSASES 1764

Query:   873 DQTGQVVDA-QSVGXXXXXXXXXXXXXXVGETDTDMVSPHENDIQQTENEGTTALPVQQE 931
               T   V A +S                   + ++  S   + +  +E+  T+A     E
Sbjct:  1765 ASTSASVSASESASTSASVSASESASTSASVSASESASTSAS-VSASESASTSASVSASE 1823

Query:   932 TINXXXXXXXXXXXXXXXXXXXXXDAVNASETSESQDQATSSP----NADQQSENLTTSS 987
             + +                      A  ++  S S+  +TS+      +   S +++ S 
Sbjct:  1824 SASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASTSTSTSASVSASE 1883

Query:   988 LSGQSESADAQQPXXXXXXXXXXXXXXXXXXXKVSENDSTTIASLQSEAIANEEQSVSPS 1047
              +  S S  A +                      SE+ ST+ AS+ +   A+   SVS S
Sbjct:  1884 SASTSASVSASESASTSASVSASESASTSASVSASESASTS-ASVSASESASTSASVSAS 1942

Query:  1048 EDVPNSGD-ETSTATITNESVPEGDQPSVDQSIGTDDIVXXXXXXXXXXXXXXXXXXXLE 1106
             E    S     S +  T+ SV   +  S   S+   +                       
Sbjct:  1943 ESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVS-- 2000

Query:  1107 VVSEGEPNKVQAEGTEIPTSQDAEQLSNSESTT-SIPSQSDVENEQQTSQDGGQAGXXXX 1165
               SE          +E  ++  +   S S ST+ S+ +          S     +     
Sbjct:  2001 -ASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASV 2059

Query:  1166 XXXXXXXXXHQIEGDQHTVDSQSTEPSIGQENDHNIADSTTVIPSESAPLEIEETTSQHS 1225
                        +   +    S S   S       +++ S +   SESA      + S+ +
Sbjct:  2060 SASESASTSASVSASESASTSASVSASESASTSASVSASKSASTSESASTSASVSASESA 2119

Query:  1226 DQAIDTESSTAVSSQSEPQAEGDQPISQDGQVNSIDSTTXXXXXXXXXXXXXXXXQDANQ 1285
               +    +S + S+ +   A   + +S    V++ DS +                  A++
Sbjct:  2120 STSASVSASESASTSASVSAS--ESVSTSASVSASDSASISASVLASESASTSASVSASE 2177

Query:  1286 DIGTESS-TAEPSQSEPQGEGEQSNVESQSTEGAEQSVGQDVNEAAVETESSTVVSGQSE 1344
                T +S +A  S S         +  + S+  A +S     + +A E+ +ST  S  + 
Sbjct:  2178 SASTSASVSASESASTSASVSASESASTSSSVSASESASTSASVSASES-ASTSASVSAS 2236

Query:  1345 PQVEDQPNVEPQATEGEPISQDANQGEIEATTAIPAENVEPSSQDVVPAGETENQTPATI 1404
                    +V   A+E    S   +  E  +T+A  + +   S+   V A E+ + + +  
Sbjct:  2237 TSASTSASVS--ASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVS 2294

Query:  1405 ASDSLVEEQPNVEQPQTEGSDQPISQGADQITDSESTTALPSQSDS-QVGEQQNID-EAQ 1462
             AS+S      +V   ++  +   +S  ++  + S S +A  S S S  V   ++    A 
Sbjct:  2295 ASES-ASTSASVSASESASTSASVS-ASESASTSASVSASTSASTSASVSASESASTSAS 2352

Query:  1463 LTEEQETSNDNQVSSTEPTNDASSQSVLAENEQSISQDAEQVNEPDSTTQLPSQSVEDEQ 1522
             ++  +  S    VS++E  +  +S SV A    S S      +E  ST+   S S     
Sbjct:  2353 VSSSESASTSASVSASESAS--TSASVSASESASTSASVS-ASESASTSASVSASESAST 2409

Query:  1523 PIVEQSQTTGDAEQPVXXXXXXXXXXXXXXVEAEQPNLEQTQTEDAQPIAQSADQEGISE 1582
                  + T+      V               E+   +   + +E A   A  +  E  S 
Sbjct:  2410 SASVSASTSASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASE--SA 2467

Query:  1583 ATTALPSQSVSTENEQPINTEVVSETESPVQSEPQTEGEQTVVDQTQLTEGTEQDADQVS 1642
             +T+A  S S S      ++    + T + V +        +V   T  +      A + +
Sbjct:  2468 STSASVSASTSASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESA 2527

Query:  1643 NSEPTTVTSQSALVENEQPSSQDSGXXXXXXXXXXXXXXXXXXXXXXXXIVNQPQAVEGA 1702
             ++  +   S+SA       +S+ +                               A E A
Sbjct:  2528 STSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESA 2587

Query:  1703 DQTITQNADEVSGVEATTSIISHSETS---DAQPNXXXXXXXXXXXXXXTTVNVQAEPSG 1759
               + + +A E +   A+ S    + TS       +              T+ +V A  S 
Sbjct:  2588 STSASVSASESASTSASVSASMSASTSASVSVSESTSTSASVSANESASTSASVSASESA 2647

Query:  1760 VESATSVPSQSDIPQEPASAEDTLDTQA 1787
               SA+   S+S       SA ++  T A
Sbjct:  2648 STSASVSASESASTSASVSASESASTSA 2675
GO:0005515 "protein binding" evidence=IPI
FB|FBgn0036181 Muc68Ca "Mucin 68Ca" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0053265 Muc68E "Mucin 68E" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0036203 Muc68D "Mucin 68D" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2RYF6 MUC22 "Mucin-22" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00019435 K06A9.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0052580 Muc14A "Mucin 14A" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
CGD|CAL0003874 PGA55 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59SG9 PGA55 "Flocculin-like protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NZW4 DSPP "Dentin sialophosphoprotein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1789
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 7e-12
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 2e-06
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 2e-06
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 3e-06
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 6e-06
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 7e-06
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 1e-05
smart0021459 smart00214, VWC, von Willebrand factor (vWF) type 1e-05
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 2e-05
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 2e-05
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 8e-05
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 2e-04
COG5271 4600 COG5271, MDN1, AAA ATPase containing von Willebran 3e-04
pfam0009357 pfam00093, VWC, von Willebrand factor type C domai 3e-04
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 5e-04
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 0.001
pfam09726680 pfam09726, Macoilin, Transmembrane protein 0.001
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 0.002
PRK13108460 PRK13108, PRK13108, prolipoprotein diacylglyceryl 0.002
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 0.004
PRK14949944 PRK14949, PRK14949, DNA polymerase III subunits ga 0.004
PRK07764824 PRK07764, PRK07764, DNA polymerase III subunits ga 0.004
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information 
 Score = 70.8 bits (173), Expect = 7e-12
 Identities = 87/497 (17%), Positives = 185/497 (37%), Gaps = 37/497 (7%)

Query: 532  SQDI-QTVETSTAVSQDASLNVQETVAPS---EDQTVESETSTQGV-QDAVIT------- 579
            ++DI  T+     + + A  N ++T   S   E +  E E+   GV +D+V++       
Sbjct: 3824 AEDITNTLNEDDDLEELA--NEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDS 3881

Query: 580  ---NEELNTESPIVNQDSPVGNEQSESQDQTTNSDSIEPINQGTTANPNVNIESTSVNAD 636
               N++L+ E   + +D    N  +E      N + +    Q +      N ES  V+ +
Sbjct: 3882 EEENQDLDEEVNDIPEDLS--NSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKE 3939

Query: 637  PAINSDPSSIPEQVSSDNHEEPTQTNQPETSSADETSSNQQGESTVGA-DQPADVQDQTV 695
               N        Q   D  E        +    D   +N Q        D P D++    
Sbjct: 3940 DD-NKALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDLDLPEDLKLDEK 3998

Query: 696  NVNQGESTTLSNNVSEGEAPNADQSEVENNQPIDNESVTTIPTQNEQTIGQSDVAVDEDT 755
              +  + + L +   E    N ++++ E ++P+ +E         ++ I Q D +   + 
Sbjct: 3999 EGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDEDPLEENNTLDEDIQQDDFSDLAED 4058

Query: 756  NASIDQDKPSSEEIEVTTALPVQSEPNSDNKISAGAQEDTLTEASTSSNVQDVDQTSASQ 815
            +  +++D       E   +       + +        ED   +     + +    ++ + 
Sbjct: 4059 DEKMNEDGFEENVQENEESTE-DGVKSDEELEQGEVPEDQAIDNHPKMDAKSTFASAEAD 4117

Query: 816  STLASDSLTNDGT-VSSENSVGDSTTAVPVQSE-QTVEQDVSQNEAQAGESESTTPLAND 873
                   +  +   +  E+ V  + TA     E + V++D S  +    E++       D
Sbjct: 4118 EENTDKGIVGENEELGEEDGVRGNGTA---DGEFEQVQEDTSTPKEAMSEADRQYQSLGD 4174

Query: 874  QTGQVVDAQSVGE-SDLSEADSDASSAVGETDTDMVSPHENDIQQTENEGTTALPVQQET 932
               +   A  + E  DL+E+ S A       D++ +   E++ +  +  G  A   Q ++
Sbjct: 4175 HLREWQQANRIHEWEDLTESQSQA-----FDDSEFMHVKEDEEEDLQALG-NAEKDQIKS 4228

Query: 933  INQDQSTSQDSESSTASSSQPQEDAVNASETSESQDQATSSPNADQQSENLTTSSLSGQS 992
            I++D+S +Q+ +S   +S+   ED  +     + QD      +  Q  E+   +     +
Sbjct: 4229 IDRDESANQNPDS--MNSTNIAEDEADEVGDKQLQD-GQDISDIKQTGEDTLPTEFGSIN 4285

Query: 993  ESADAQQPSETETTSNN 1009
            +S    + SE E   + 
Sbjct: 4286 QSEKVFELSEDEDIEDE 4302

Length = 4600
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|214564 smart00214, VWC, von Willebrand factor (vWF) type C domain Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|215712 pfam00093, VWC, von Willebrand factor type C domain Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|237284 PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|237863 PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1789
smart0021459 VWC von Willebrand factor (vWF) type C domain. 98.83
PF0009357 VWC: von Willebrand factor type C domain; InterPro 98.76
smart0021567 VWC_out von Willebrand factor (vWF) type C domain. 97.16
PF1271456 TILa: TILa domain 96.25
PF1543065 SVWC: Single domain von Willebrand factor type C 95.13
PF14828437 Amnionless: Amnionless 93.52
>smart00214 VWC von Willebrand factor (vWF) type C domain Back     alignment and domain information 
Probab=98.83  E-value=3.4e-09  Score=89.17  Aligned_cols=56  Identities=34%  Similarity=1.045  Sum_probs=50.6

Q ss_pred             cccCCEEccCCCCCCCCCCCccceEEeCCc-ceeeeccCCCCCCCCCCCCCCC--CCCCCCCCCCcC
Q psy9452         147 CIIDGQLHSNNSRIETKNPCHVQCLCVNGA-PSCESLECPPPPPTHRNCMPIH--PGPDLCCPAYAC  210 (1789)
Q Consensus       147 CLVDGQVYANGSDVPKpEPCEV~CYCINGi-VVCDEVECelPPeNlKDCTPV~--IPPGECCPTYIC  210 (1789)
                      |+++|++|.+| ..|.+++|. .|+|.+|. |.|..+.|..+    ..|....  ..+|+|||  +|
T Consensus         1 C~~~g~~y~~G-~~W~~~~C~-~C~C~~g~~v~C~~~~Cp~~----~~C~~~~~~~~~g~CCp--~C   59 (59)
T smart00214        1 CVHNGEVYNDG-ETWKPDPCQ-ICTCLDGETVLCDPVECPPP----PDCPNPERVKPPGECCP--RC   59 (59)
T ss_pred             CccCCEEeCCC-CEECCCCCe-ECCcCCCCEEEeeeecCCCC----CCCCCCcccCCCCCcCC--CC
Confidence            89999999999 999999999 99999999 99999999873    3788776  68999999  65

>PF00093 VWC: von Willebrand factor type C domain; InterPro: IPR001007 The vWF domain is found in various plasma proteins: complement factors B, C2, CR3 and CR4; the integrins (I-domains); collagen types VI, VII, XII and XIV; and other extracellular proteins [, , ] Back     alignment and domain information
>smart00215 VWC_out von Willebrand factor (vWF) type C domain Back     alignment and domain information
>PF12714 TILa: TILa domain Back     alignment and domain information
>PF15430 SVWC: Single domain von Willebrand factor type C Back     alignment and domain information
>PF14828 Amnionless: Amnionless Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1789
1u5m_A73 Cartilage, alpha 1 type II collagen isoform 1; dis 2e-08
3bk3_C67 Crossveinless 2, bone morphogenetic protein 2; TGF 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1u5m_A Cartilage, alpha 1 type II collagen isoform 1; disulfide bonds, two SUB-domain architecture, beta-sheet, structural protein; NMR {Homo sapiens} SCOP: g.27.1.2 Length = 73 Back     alignment and structure
 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 140 ESPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCM-PIH 198
           E    G C+ DGQ +++        PC   C+C  G   C+ + C         C+ P  
Sbjct: 3   EFQEAGSCVQDGQRYNDKDVW-KPEPC-RICVCDTGTVLCDDIICEDVKD----CLSPEI 56

Query: 199 PGPDLCCP 206
           P    CCP
Sbjct: 57  P-FGECCP 63
>3bk3_C Crossveinless 2, bone morphogenetic protein 2; TGF-beta superfamily, BMP modulator proteins, chordin, BMP inhibitor, chondrogenesis; 2.70A {Danio rerio} Length = 67 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1789
1u5m_A73 Cartilage, alpha 1 type II collagen isoform 1; dis 99.18
3bk3_C67 Crossveinless 2, bone morphogenetic protein 2; TGF 98.41
>1u5m_A Cartilage, alpha 1 type II collagen isoform 1; disulfide bonds, two SUB-domain architecture, beta-sheet, structural protein; NMR {Homo sapiens} SCOP: g.27.1.2 Back     alignment and structure
Probab=99.18  E-value=2.2e-11  Score=105.69  Aligned_cols=62  Identities=29%  Similarity=0.806  Sum_probs=56.2

Q ss_pred             CCcccCCEEccCCCCCCCCCCCccceEEeCCcceeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCC
Q psy9452         145 GDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLCCPAYACDGPL  214 (1789)
Q Consensus       145 GDCLVDGQVYANGSDVPKpEPCEV~CYCINGiVVCDEVECelPPeNlKDCTPV~IPPGECCPTYICPdds  214 (1789)
                      +.|+++|++|.+| .+|+++||. +|+|.+|.|.|..+.|..    +.+|.....++|+|||  +|+.+.
T Consensus         8 ~~C~~~G~~y~~g-e~W~~d~C~-~C~C~~G~v~C~~~~Cp~----~~~C~~p~~~~GeCCP--vC~~~~   69 (73)
T 1u5m_A            8 GSCVQDGQRYNDK-DVWKPEPCR-ICVCDTGTVLCDDIICED----VKDCLSPEIPFGECCP--ICPADL   69 (73)
T ss_dssp             SCEESSSCEECSS-CEECSCSSE-EEEEETTEEEEEECCCSC----CSSCSCCCCCSSCSCC--SCCSSS
T ss_pred             CCeeECCEEEcCC-CEECCcCcC-ceECCCCcEEeccccCCC----ccCCCCCcccCCCcCC--CCCCcc
Confidence            5799999999999 999999999 999999999999999987    2489887788999999  997653
>3bk3_C Crossveinless 2, bone morphogenetic protein 2; TGF-beta superfamily, BMP modulator proteins, chordin, BMP inhibitor, chondrogenesis; 2.70A {Danio rerio} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1789
d1u5ma_73 g.27.1.2 (A:) Collagen alpha 1(II) chain precursor 2e-07
>d1u5ma_ g.27.1.2 (A:) Collagen alpha 1(II) chain precursor {Human (Homo sapiens) [TaxId: 9606]} Length = 73 Back     information, alignment and structure

class: Small proteins
fold: FnI-like domain
superfamily: FnI-like domain
family: VWC domain
domain: Collagen alpha 1(II) chain precursor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 2e-07
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 145 GDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLC 204
           G C+ DGQ +++        PC   C+C  G   C+ + C         C+        C
Sbjct: 8   GSCVQDGQRYNDKDVW-KPEPC-RICVCDTGTVLCDDIICEDVKD----CLSPEIPFGEC 61

Query: 205 CP 206
           CP
Sbjct: 62  CP 63

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1789
d1u5ma_73 Collagen alpha 1(II) chain precursor {Human (Homo 99.3
>d1u5ma_ g.27.1.2 (A:) Collagen alpha 1(II) chain precursor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Small proteins
fold: FnI-like domain
superfamily: FnI-like domain
family: VWC domain
domain: Collagen alpha 1(II) chain precursor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1e-12  Score=111.75  Aligned_cols=68  Identities=26%  Similarity=0.724  Sum_probs=58.7

Q ss_pred             CCCCCCcccCCEEccCCCCCCCCCCCccceEEeCCcceeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCC
Q psy9452         141 SPANGDCIIDGQLHSNNSRIETKNPCHVQCLCVNGAPSCESLECPPPPPTHRNCMPIHPGPDLCCPAYACDGPLTP  216 (1789)
Q Consensus       141 IPGEGDCLVDGQVYANGSDVPKpEPCEV~CYCINGiVVCDEVECelPPeNlKDCTPV~IPPGECCPTYICPddsTt  216 (1789)
                      +...++|+++|++|.+| ..|+++||. .|+|++|.|.|..+.|...    ..|.....++|+|||  +|+.+..+
T Consensus         4 ~~~~~~C~~~g~~y~~G-e~w~~d~C~-~C~C~~G~v~C~~~~Cp~~----~~c~~~~~~~g~CCp--~C~~~~~s   71 (73)
T d1u5ma_           4 FQEAGSCVQDGQRYNDK-DVWKPEPCR-ICVCDTGTVLCDDIICEDV----KDCLSPEIPFGECCP--ICPADLAA   71 (73)
T ss_dssp             CCCCSCEESSSCEECSS-CEECSCSSE-EEEEETTEEEEEECCCSCC----SSCSCCCCCSSCSCC--SCCSSSSC
T ss_pred             cccCCCCeECCEEecCC-CEECCCCCe-EeEecCCeEEEeeccCCCC----CCCCCceecCCCcCC--cCCCCccc
Confidence            45668999999999999 789999999 9999999999999999862    357666678999999  99887543