Psyllid ID: psy9582

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Secondary Structure (PSIPRED)
ccccccEEEEEccccHHHHHHHHHHHcccccccccEEEEEEEccccHHHccccccHHHccccccccccccEEEEccHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHccccccccccEEEEcccccccccccccEEEccEEccccccccccccccccHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccEEEEEEEEEEcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEccccHHHHHHHHHHHccccccccccEEEEEEccccHHHHHHHHHHHHHHHccccccEEEEEEEccHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHccccccHHHEEEccHHHHHHHHHHHHHHHcccHHHEEccEEEEccccccEEEccccEEccEEHHHHHccHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccEEEEEEEEEccEEEEcccccccHHHHHHHHHHHHHHHHHHHccHHHcc
Coil and Loop (DISEMBL)
mlkkpvrisitgaagqigYNIIFRIangdllgkdqPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVdvsvhenpitafkdANIAILIGsfprksnmerseLLAINSSIFIEQGKALNSVASRDVKVLVVgnpvntntyitmksapdlsyknFTAMLRLDHNRAIAKLASKlnepvssiKKVFVWgnhslsmypdyryaTVNGVLIRDMInnnsfwnknvflpaisrrGEEIISIRGASSAASAASAAIDHIkdwifgtenwvtmgipsdgsynvpkdiifgfpvkiknsKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Flexible Loop (DISEMBL)
mlkkpvrisitgaagqigyNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGnpvntntyitmksapdlSYKNFTAMLRLDHNRAIAKLasklnepvssiKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIiqnleidkfsrKKINLSieelkneilsishlir
Low Complexity Region (SEG)
MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPaisrrgeeiisirgassaasaasaaIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Disordered region (IsUnstruct)
******RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRK***ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI*****
Disordered Region (DISOPRED)
***KPVR*SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Disordered Region (DISEMBL)
MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIR***********AIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Disordered Region (DISPRO)
***KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAA***SAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
A6SY47	329	Malate dehydrogenase OS=J	yes	N/A	0.993	0.993	0.632	1e-124
A4G5Z9	329	Malate dehydrogenase OS=H	yes	N/A	0.993	0.993	0.629	1e-123
A2SHT9	328	Malate dehydrogenase OS=M	yes	N/A	0.993	0.996	0.623	1e-121
C5CSI5	328	Malate dehydrogenase OS=V	yes	N/A	0.993	0.996	0.617	1e-121
Q126N9	328	Malate dehydrogenase OS=P	yes	N/A	0.993	0.996	0.617	1e-120
B2U705	328	Malate dehydrogenase OS=R	yes	N/A	0.993	0.996	0.607	1e-120
Q9ZF99	329	Malate dehydrogenase OS=A	N/A	N/A	0.993	0.993	0.604	1e-120
A1VRQ1	328	Malate dehydrogenase OS=P	yes	N/A	0.993	0.996	0.607	1e-119
Q8XXW5	329	Malate dehydrogenase OS=R	yes	N/A	0.993	0.993	0.598	1e-119
Q21XH1	328	Malate dehydrogenase 1 OS	yes	N/A	0.993	0.996	0.617	1e-119

>sp|A6SY47|MDH_JANMA Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1

 Score =  446 bits (1147), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/329 (63%), Positives = 274/329 (83%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE +++K+QKA+KGVIMEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIADEKAQKALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  V+ H +P+TAFKDA++A+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+++PV+S
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MYPDYR+AT +G  +++ I N+  WNK+VFLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYPDYRFATADGKSVKEAI-NDEVWNKDVFLPTVGKRGAAIIDARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   WVTMGIPSDGSY +PKD IFGFPV ++N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPKDTIFGFPVTVENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++INL+++EL  E   + HL+
Sbjct: 300 LEIDAFSQERINLTLKELLEEREGVKHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.
Janthinobacterium sp. (strain Marseille) (taxid: 375286)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 7

>sp|A4G5Z9|MDH_HERAR Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1

 Score =  441 bits (1135), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/329 (62%), Positives = 269/329 (81%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  N+K+Q A+KGVIMEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIDNEKAQNALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  VS H +P+TAFKD +IA+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K  +PV++
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTA 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MYPDYR+AT++G  +++ I N+  WNK+VFLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYPDYRFATIDGKSVKEAI-NDEVWNKDVFLPTVGKRGAAIIEARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   WVTMGIPSDGSY +PKD +FGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPKDTMFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++INL+++EL  E   + HL+
Sbjct: 300 LEIDAFSQERINLTLKELSEEREGVKHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Herminiimonas arsenicoxydans (taxid: 204773)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|A2SHT9|MDH_METPP Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1

 Score =  436 bits (1120), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/329 (62%), Positives = 265/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE  ++K+QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           EDC FPLL  +  H +P+TAFKDA+ A+L+GS PR   MER+ELL+IN +IF  QGKALN
Sbjct: 61  EDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLSINGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MK+APDL  KNFTAMLRLDHNRA +++A+K  +PVSS
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKAAPDLPRKNFTAMLRLDHNRAASQIAAKTGKPVSS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           IK++ VWGNHS +MY DYR+AT++G  ++DMIN+   WNK+VFLP + +RG  II  RG 
Sbjct: 181 IKQLAVWGNHSPTMYADYRFATIDGASVKDMINDQ-VWNKDVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMG+PS+G Y +PKD++FGFPV   N +YKI+  
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGAWVTMGVPSNGEYGIPKDVMFGFPVTCANGEYKIVDG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           L ID FS++ IN ++ EL+ E   + HLI
Sbjct: 300 LAIDAFSQECINKTLAELQGEQDGVKHLI 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Methylibium petroleiphilum (strain PM1) (taxid: 420662)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|C5CSI5|MDH_VARPS Malate dehydrogenase OS=Variovorax paradoxus (strain S110) GN=mdh PE=3 SV=1

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/329 (61%), Positives = 263/329 (79%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE  ++K+QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  +  H +P+TAFKDA+ A+L+GS PR   MER+ELLA+N +IF  QGKALN
Sbjct: 61  DDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA +++A+K  + V+ 
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVAD 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT+ G  +  MIN+   WN N FLP + +RG  II  RG 
Sbjct: 181 IEKLVVWGNHSPTMYADYRFATIKGESVAKMINDQE-WNANTFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMGIPSDG Y +PKD +FGFPV  +N +YK+++ 
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGKWVTMGIPSDGQYGIPKDTMFGFPVTCENGEYKLVEG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++IN ++EEL+ E   ++HLI
Sbjct: 300 LEIDAFSQERINKTLEELQGEQAGVAHLI 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Variovorax paradoxus (strain S110) (taxid: 543728)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q126N9|MDH_POLSJ Malate dehydrogenase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=mdh PE=3 SV=1

 Score =  433 bits (1113), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/329 (61%), Positives = 262/329 (79%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE   +  QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  +  H +P+TAFKDA+ A+L+GS PR   MER+ELLA+N +IF  QGKALN
Sbjct: 61  DDCAFPLLAGMEAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA +++A+K  + V+ 
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVAD 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT+NG  +  MIN+   WN NVFLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYADYRFATINGESVAKMINDQE-WNANVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMGIPSDG Y +PKD +FGFPV  +N +YK+++ 
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGKWVTMGIPSDGQYGIPKDTMFGFPVTCENGEYKLVEG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++IN ++EEL+ E   ++HL+
Sbjct: 300 LEIDAFSQERINKTLEELQGEQAGVAHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Polaromonas sp. (strain JS666 / ATCC BAA-500) (taxid: 296591)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|B2U705|MDH_RALPJ Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1

 Score =  432 bits (1111), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 200/329 (60%), Positives = 268/329 (81%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY ++FRIA G++LGKDQP+ILQLLE  ++K+QKA+KGV+MEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           EDC FPLL  +  H +P+TAFKD ++A+L+G+ PR   MER++LL+ N+ IF  QG+ALN
Sbjct: 61  EDCAFPLLAGMQAHSDPMTAFKDVDVALLVGARPRGPGMERADLLSANAQIFTAQGRALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  +NFTAMLRLDHNRA++++A+K  +PVSS
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+FVWGNHS +MY DYRYAT++G  ++DMI N+  WN +VFLP + +RG  II  RG 
Sbjct: 181 IEKLFVWGNHSPTMYADYRYATIDGKSVKDMI-NDPVWNNDVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT    VTMGIPS+G Y +PKD++FGFPV  +N KYKI++ 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKIVTMGIPSNGEYGIPKDVMFGFPVTTENGKYKIVEG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID++S+ KI ++++EL+ E   + HL+
Sbjct: 300 LEIDEYSQGKIKITLDELEGERAGVQHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Ralstonia pickettii (strain 12J) (taxid: 402626)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZF99|MDH_AQUAR Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3

 Score =  431 bits (1109), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/329 (60%), Positives = 266/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQI Y+++FRIANGD+LGKDQP+ILQLLE  N+K+QKA++GV+MEI
Sbjct: 1   MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  ++ H +P+TAFKDA++A+L+G+ PR   MER +LL  N+ IF  QGKA++
Sbjct: 61  DDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR++KVLVVGNP NTN YI MKSAP L  KNFTAMLRLDHNRA++++A+K  +PVSS
Sbjct: 121 AVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+FVWGNHS +MY DYRYA ++G  ++DMIN+++ WN++ FLP + +RG  II  RG 
Sbjct: 181 IEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDA-WNRDTFLPTVGKRGAAIIDARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDHI DW+ GT   W TMGIPSDGSY +P+ +IFGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           L ID FS+++IN+++ EL  E   + HL+
Sbjct: 300 LSIDAFSQERINVTLNELLEEQNGVQHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Aquaspirillum arcticum (taxid: 87645)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|A1VRQ1|MDH_POLNA Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1

 Score =  429 bits (1103), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/329 (60%), Positives = 263/329 (79%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE   +  QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLLV+++ H +P+TAFKDA+ A+L+GS PR   MER+ELLA+N +IF  QGKALN
Sbjct: 61  DDCAFPLLVEMTAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASRDV+VLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA +++A+K  + V+ 
Sbjct: 121 AVASRDVRVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKAVAD 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT+ G  +  MIN+   WN NVFLP + +RG  II  RG+
Sbjct: 181 IEKLTVWGNHSPTMYADYRFATIGGESVAQMINDQE-WNANVFLPTVGKRGAAIIEARGS 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMGIPS G Y +P + +FGFPV  +N +YKI++ 
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGKWVTMGIPSGGEYGIPAETMFGFPVTCENGEYKIVEG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++IN+++ EL+ E   ++HL+
Sbjct: 300 LEIDAFSQERINITLAELEGEKAGVAHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Polaromonas naphthalenivorans (strain CJ2) (taxid: 365044)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q8XXW5|MDH_RALSO Malate dehydrogenase OS=Ralstonia solanacearum (strain GMI1000) GN=mdh PE=3 SV=1

 Score =  429 bits (1102), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 197/329 (59%), Positives = 266/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY ++FRIA G++LGKDQP+ILQLLE  ++K+QKA+KGV+MEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           EDC FPLL  +  H +P+TAFKD ++A+L+G+ PR   MER +LL+ N+ IF  QGKALN
Sbjct: 61  EDCAFPLLAGMEAHADPMTAFKDVDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  +NFTAMLRLDHNRA++++A+K  +PVSS
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+FVWGNHS +MY DYRYAT++G  ++DMI N+  WN +VFLP + +RG  II  RG 
Sbjct: 181 IEKLFVWGNHSPTMYADYRYATIDGQSVKDMI-NDPVWNNDVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ G+    VTMGIPS+G Y +P+D++FGFPV   N KY++++ 
Sbjct: 240 SSAASAANAAIDHVRDWVLGSNGKIVTMGIPSNGDYEIPQDVMFGFPVTTANGKYEVVKG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
            E+D +SR+KIN++++EL+ E   + HL+
Sbjct: 300 FEVDAYSREKINITLKELEEERAGVQHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Ralstonia solanacearum (strain GMI1000) (taxid: 267608)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q21XH1|MDH1_RHOFD Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/329 (61%), Positives = 265/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY I+FRIA+G++LGKDQP+ILQLLE   +K+Q+A++GV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYAILFRIASGEMLGKDQPVILQLLEVPVEKAQQALQGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  +  H +P+TAFKD + A+LIGS PR   MER+ELLA+N +IF  QGKALN
Sbjct: 61  QDCAFPLLAGMEAHSDPMTAFKDVDYALLIGSRPRGPGMERAELLAVNGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA+++LASK  + V+ 
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLASKTGKAVAD 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT+NG  ++DMIN+   WN N FLP + +RG  II+ RG 
Sbjct: 181 IEKMAVWGNHSPTMYADYRFATINGESVKDMINDQD-WNANTFLPTVGKRGAAIIAARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMGIPSDG Y +PK+ +FGFPV  +  +YK++QN
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGKWVTMGIPSDGQYGIPKETMFGFPVTCEGGEYKVVQN 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           L ID FS++ IN +++EL++E   ++HL+
Sbjct: 300 LPIDAFSQECINKTLKELQDEQAGVAHLL 328

Catalyzes the reversible oxidation of malate to oxaloacetate.

Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) (taxid: 338969)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
152980043	329	malate dehydrogenase [Janthinobacterium	0.993	0.993	0.632	1e-123
134094986	329	malate dehydrogenase [Herminiimonas arse	0.993	0.993	0.629	1e-121
300312280	329	malate dehydrogenase [Herbaspirillum ser	0.993	0.993	0.626	1e-121
340786933	329	malate dehydrogenase [Collimonas fungivo	0.993	0.993	0.610	1e-121
399017633	329	malate dehydrogenase [Herbaspirillum sp.	0.993	0.993	0.620	1e-120
398808591	328	malate dehydrogenase [Variovorax sp. CF3	0.993	0.996	0.617	1e-120
319792258	328	malate dehydrogenase [Variovorax paradox	0.993	0.996	0.617	1e-120
124267359	328	malate dehydrogenase [Methylibium petrol	0.993	0.996	0.623	1e-120
398833697	329	malate dehydrogenase [Herbaspirillum sp.	0.993	0.993	0.607	1e-119
415949066	324	Malate dehydrogenase [Herbaspirillum fri	0.978	0.993	0.626	1e-119

>gi|152980043|ref|YP_001353194.1| malate dehydrogenase [Janthinobacterium sp. Marseille] gi|167008940|sp|A6SY47.1|MDH_JANMA RecName: Full=Malate dehydrogenase gi|151280120|gb|ABR88530.1| malate dehydrogenase [Janthinobacterium sp. Marseille]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/329 (63%), Positives = 274/329 (83%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE +++K+QKA+KGVIMEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIADEKAQKALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  V+ H +P+TAFKDA++A+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+++PV+S
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MYPDYR+AT +G  +++ I N+  WNK+VFLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYPDYRFATADGKSVKEAI-NDEVWNKDVFLPTVGKRGAAIIDARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   WVTMGIPSDGSY +PKD IFGFPV ++N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPKDTIFGFPVTVENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++INL+++EL  E   + HL+
Sbjct: 300 LEIDAFSQERINLTLKELLEEREGVKHLL 328

Source: Janthinobacterium sp. Marseille

Species: Janthinobacterium sp. Marseille

Genus: Janthinobacterium

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|134094986|ref|YP_001100061.1| malate dehydrogenase [Herminiimonas arsenicoxydans] gi|167008939|sp|A4G5Z9.1|MDH_HERAR RecName: Full=Malate dehydrogenase gi|133738889|emb|CAL61936.1| malate dehydrogenase [Herminiimonas arsenicoxydans]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/329 (62%), Positives = 269/329 (81%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  N+K+Q A+KGVIMEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIDNEKAQNALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  VS H +P+TAFKD +IA+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K  +PV++
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTA 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MYPDYR+AT++G  +++ I N+  WNK+VFLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYPDYRFATIDGKSVKEAI-NDEVWNKDVFLPTVGKRGAAIIEARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   WVTMGIPSDGSY +PKD +FGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPKDTMFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++INL+++EL  E   + HL+
Sbjct: 300 LEIDAFSQERINLTLKELSEEREGVKHLL 328

Source: Herminiimonas arsenicoxydans

Species: Herminiimonas arsenicoxydans

Genus: Herminiimonas

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|300312280|ref|YP_003776372.1| malate dehydrogenase [Herbaspirillum seropedicae SmR1] gi|124483656|emb|CAM32701.1| Malate dehydrogenase protein [Herbaspirillum seropedicae] gi|300075065|gb|ADJ64464.1| malate dehydrogenase protein [Herbaspirillum seropedicae SmR1]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/329 (62%), Positives = 270/329 (82%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  ++K+QKA+KGVIMEI
Sbjct: 1   MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  V+ H +P+TAFKDA+IA+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+ +PVS+
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT +GV ++D IN+   WNKNVFLP + +RG  II  RG 
Sbjct: 181 IEKLCVWGNHSPTMYADYRFATADGVSVKDTINDQE-WNKNVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   W TMGIPSDGSY +P+  +FGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID+FS+++IN++++EL  E   + HL+
Sbjct: 300 LEIDEFSQERINITLKELMEEREGVKHLV 328

Source: Herbaspirillum seropedicae SmR1

Species: Herbaspirillum seropedicae

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|340786933|ref|YP_004752398.1| malate dehydrogenase [Collimonas fungivorans Ter331] gi|340552200|gb|AEK61575.1| Malate dehydrogenase [Collimonas fungivorans Ter331]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 201/329 (61%), Positives = 270/329 (82%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  ++K+QKA+KGVIME+
Sbjct: 1   MAKSPLRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEV 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  ++ H +P+TAFKD ++A+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGITAHSDPLTAFKDVDVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+ +PV+S
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVAS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+FVWGNHS +MY DYRYAT +G  ++D+IN+   WNK+VFLP + +RG  II  RG 
Sbjct: 181 IEKLFVWGNHSPTMYADYRYATADGASVKDLINDQ-VWNKDVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   W TMG+PSDGSY +P+  +FGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWTTMGVPSDGSYGIPEGTMFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++IN++++EL+ E   + HL+
Sbjct: 300 LEIDAFSQERINITLKELQEERDGVKHLV 328

Source: Collimonas fungivorans Ter331

Species: Collimonas fungivorans

Genus: Collimonas

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|399017633|ref|ZP_10719823.1| malate dehydrogenase [Herbaspirillum sp. CF444] gi|398102858|gb|EJL93034.1| malate dehydrogenase [Herbaspirillum sp. CF444]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/329 (62%), Positives = 267/329 (81%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  ++K+QKA+KGVIMEI
Sbjct: 1   MAKAPKRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  V+ H +P+TAFKDA+IA+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASRDVKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+ +PVS+
Sbjct: 121 AVASRDVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGQPVSA 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT +G  ++D+IN+   WNK+ FLP + +RG  II  RG 
Sbjct: 181 IEKLCVWGNHSPTMYADYRFATADGKPVKDLINDQ-VWNKDTFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH+ DWI GT   W TMG+PSDGSY +P+  +FGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVHDWILGTNGKWTTMGVPSDGSYGIPEGTMFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID+FS+++IN++++EL  E   + HL+
Sbjct: 300 LEIDEFSQERINITLKELSEEREGVKHLV 328

Source: Herbaspirillum sp. CF444

Species: Herbaspirillum sp. CF444

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|398808591|ref|ZP_10567454.1| malate dehydrogenase [Variovorax sp. CF313] gi|398087623|gb|EJL78209.1| malate dehydrogenase [Variovorax sp. CF313]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/329 (61%), Positives = 265/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE  ++K+QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  +  H +P+TAFKDA+ A+L+GS PR   MER+ELLA+N +IF  QGKALN
Sbjct: 61  DDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA +++A+K  +PV+ 
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKPVAD 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT+ G  +  MIN+   WN N FLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYADYRFATIKGESVAKMINDQE-WNANTFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMGIPSDG Y +PKD++FGFPV  +N +YK+++ 
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGKWVTMGIPSDGQYGIPKDVMFGFPVTCENGEYKLVEG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++IN ++EEL+ E   ++HL+
Sbjct: 300 LEIDAFSQERINKTLEELEGERAGVAHLL 328

Source: Variovorax sp. CF313

Species: Variovorax sp. CF313

Genus: Variovorax

Family: Comamonadaceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|319792258|ref|YP_004153898.1| malate dehydrogenase [Variovorax paradoxus EPS] gi|315594721|gb|ADU35787.1| malate dehydrogenase [Variovorax paradoxus EPS]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/329 (61%), Positives = 265/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE  ++K+QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  +  H +P+TAFKDA+ A+L+GS PR   MER+ELLA+N +IF  QGKALN
Sbjct: 61  DDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA +++A+K  + V+ 
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVAD 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT+NG  +  MIN+   WN N FLP + +RG  II  RG 
Sbjct: 181 IEKLTVWGNHSPTMYADYRFATINGESVAKMINDQE-WNANTFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMGIPSDG Y +PKD++FGFPV  +N +YK+++ 
Sbjct: 240 SSAASAANAAIDHMRDWALGTSGKWVTMGIPSDGQYGIPKDVMFGFPVTCENGEYKLVEG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++IN ++EEL+ E   ++HL+
Sbjct: 300 LEIDAFSQERINKTLEELEGERAGVAHLL 328

Source: Variovorax paradoxus EPS

Species: Variovorax paradoxus

Genus: Variovorax

Family: Comamonadaceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|124267359|ref|YP_001021363.1| malate dehydrogenase [Methylibium petroleiphilum PM1] gi|152032583|sp|A2SHT9.1|MDH_METPP RecName: Full=Malate dehydrogenase gi|124260134|gb|ABM95128.1| malate dehydrogenase (NAD) [Methylibium petroleiphilum PM1]

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/329 (62%), Positives = 265/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M KKPVR+++TGAAGQIGY ++FRIA+G++LGKDQP+ILQLLE  ++K+QKA+KGV+ME+
Sbjct: 1   MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           EDC FPLL  +  H +P+TAFKDA+ A+L+GS PR   MER+ELL+IN +IF  QGKALN
Sbjct: 61  EDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLSINGAIFTAQGKALN 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR+VKVLVVGNP NTN YI MK+APDL  KNFTAMLRLDHNRA +++A+K  +PVSS
Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKAAPDLPRKNFTAMLRLDHNRAASQIAAKTGKPVSS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           IK++ VWGNHS +MY DYR+AT++G  ++DMIN+   WNK+VFLP + +RG  II  RG 
Sbjct: 181 IKQLAVWGNHSPTMYADYRFATIDGASVKDMINDQ-VWNKDVFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW  GT   WVTMG+PS+G Y +PKD++FGFPV   N +YKI+  
Sbjct: 240 SSAASAANAAIDHMRDWALGTNGAWVTMGVPSNGEYGIPKDVMFGFPVTCANGEYKIVDG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           L ID FS++ IN ++ EL+ E   + HLI
Sbjct: 300 LAIDAFSQECINKTLAELQGEQDGVKHLI 328

Source: Methylibium petroleiphilum PM1

Species: Methylibium petroleiphilum

Genus: Methylibium

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|398833697|ref|ZP_10591822.1| malate dehydrogenase [Herbaspirillum sp. YR522] gi|398221127|gb|EJN07554.1| malate dehydrogenase [Herbaspirillum sp. YR522]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/329 (60%), Positives = 267/329 (81%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  ++K+QKA+KGVIMEI
Sbjct: 1   MAKAPKRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  V+ H +P+TAFKD ++A+L+G+ PR   MER +LL  N+ IF  QGKAL+
Sbjct: 61  DDCAFPLLAGVTAHSDPMTAFKDVDVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASRDVKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+ +PV++
Sbjct: 121 AVASRDVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVAA 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+ VWGNHS +MY DYR+AT +G  ++D+IN+   WNK+ FLP + +RG  II  RG 
Sbjct: 181 IEKLVVWGNHSPTMYADYRFATADGASVKDLINDQ-VWNKDTFLPTVGKRGAAIIEARGL 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDH++DW+ GT   W TMG+PSDGSY +P+  +FGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHVRDWVLGTNGKWTTMGVPSDGSYGIPEGTMFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           LEID FS+++I+L+++EL+ E   + HL+
Sbjct: 300 LEIDAFSQERIDLTLKELQEERDGVKHLV 328

Source: Herbaspirillum sp. YR522

Species: Herbaspirillum sp. YR522

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|415949066|ref|ZP_11556827.1| Malate dehydrogenase [Herbaspirillum frisingense GSF30] gi|407757793|gb|EKF67712.1| Malate dehydrogenase [Herbaspirillum frisingense GSF30]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/324 (62%), Positives = 266/324 (82%), Gaps = 2/324 (0%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +R+++TGAAGQIGY+++FRIANGDLLGKDQP+ILQLLE  ++K+QKA+KGVIMEI+DC F
Sbjct: 1   MRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEIDDCAF 60

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
           PLL  V+ H +P+TAFKDA+IA+L+G+ PR   MER +LL  N+ IF  QGKAL++VASR
Sbjct: 61  PLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASR 120

Query: 126 DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVF 185
           DVKVLVVGNP NTN YI MKSAP+L  KNFTAMLRLDHNRA++++A+K+ +PVS+I+K+ 
Sbjct: 121 DVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSAIEKLC 180

Query: 186 VWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAAS 245
           VWGNHS +MY DYR+AT +G  ++D IN+   WNKNVFLP + +RG  II  RG SSAAS
Sbjct: 181 VWGNHSPTMYADYRFATADGASVKDTINDQE-WNKNVFLPTVGKRGAAIIEARGLSSAAS 239

Query: 246 AASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDK 304
           AA+AAIDH++DW+ GT   W TMGIPSDGSY +P+  +FGFPV  +N +YKI+Q LEID+
Sbjct: 240 AANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGLEIDE 299

Query: 305 FSRKKINLSIEELKNEILSISHLI 328
           FS+++IN++++EL  E   + HL+
Sbjct: 300 FSQERINITLKELLEEREGVKHLV 323

Source: Herbaspirillum frisingense GSF30

Species: Herbaspirillum frisingense

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
DICTYBASE|DDB_G0292600	348	mdhB "malate dehydrogenase" [D	0.981	0.928	0.440	8.4e-74
UNIPROTKB|P0A5J6	329	mdh "Malate dehydrogenase" [My	0.984	0.984	0.434	2.8e-73
FB|FBgn0262782	337	Mdh1 "Malate dehydrogenase 1"	0.972	0.949	0.421	1.8e-69
ZFIN|ZDB-GENE-040204-1	333	mdh1a "malate dehydrogenase 1a	0.960	0.948	0.438	1.9e-67
TAIR|locus:2176441	332	c-NAD-MDH2 "cytosolic-NAD-depe	0.963	0.954	0.417	6.5e-67
TAIR|locus:2165066	339	c-NAD-MDH3 "cytosolic-NAD-depe	0.957	0.929	0.435	1.7e-66
UNIPROTKB|P40925	334	MDH1 "Malate dehydrogenase, cy	0.960	0.946	0.423	2.2e-66
UNIPROTKB|E2QV08	348	MDH1 "Malate dehydrogenase" [C	0.954	0.902	0.432	5.8e-66
MGI|MGI:97051	334	Mdh1 "malate dehydrogenase 1,	0.960	0.946	0.420	7.4e-66
RGD|3072	334	Mdh1 "malate dehydrogenase 1,	0.960	0.946	0.420	7.4e-66

DICTYBASE|DDB_G0292600 mdhB "malate dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
 Identities = 145/329 (44%), Positives = 208/329 (63%)

Query:     3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
             K PVR++ITGA+GQIGY ++FRIA+GD+LGKDQPIILQ LE     +  ++KGV ME++D
Sbjct:    22 KAPVRVAITGASGQIGYQLLFRIASGDMLGKDQPIILQCLELPG--AMNSLKGVSMELDD 79

Query:    63 CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
             C FPLL  +   + P  AF  A+ A+L+G+ PR   MER +LL  N+ IF  QGKAL+  
Sbjct:    80 CAFPLLKGIVQSDKPEEAFAGADYALLVGARPRSKGMERGDLLKANAEIFSVQGKALDKS 139

Query:   123 ASRD-VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
             A+RD ++VLVVGNP NTN  I  ++AP++  K F+AM RLDHNR +A+LA K    V+ I
Sbjct:   140 ANRDTLRVLVVGNPANTNALIAARNAPNIDPKRFSAMTRLDHNRGLAQLADKTGSAVTDI 199

Query:   182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXX 241
             +K  +WGNHS + YPD  + TV G  + D IN+   W K+ F+P                
Sbjct:   200 EKFCIWGNHSATQYPDINFGTVKGKSLVDTINDQK-WVKDNFIPTVQQRGAAIIAARGLS 258

Query:   242 XXXXXXXXXIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNS-KYKIIQN 299
                      IDH++DW +GT   W +M I S+G Y   K + F FPV + N  KY+I++ 
Sbjct:   259 SAASAASAAIDHMRDWTYGTNGQWTSMAIYSEGEYGADKGLYFSFPVIVDNKGKYEIVKG 318

Query:   300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
             L++D+FS+++ + + +EL +E+  +  L+
Sbjct:   319 LKLDQFSQERFDATRKELLSEMDGVKELL 347

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|P0A5J6 mdh "Malate dehydrogenase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 143/329 (43%), Positives = 214/329 (65%)

Query:     1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
             M   P+++++TGAAGQIGY+++FR+A+G LLG D+PI L+LLE   + + +A++GV+ME+
Sbjct:     1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEI--EPALQALEGVVMEL 58

Query:    61 EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
             +DC FPLL  V +  +P   F   ++A+L+G+ PR + MERS+LL  N +IF  QGKALN
Sbjct:    59 DDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALN 118

Query:   121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
             +VA+ DV+V V GNP NTN  I M +APD+  + F+A+ RLDHNRAI++LA+K    V+ 
Sbjct:   119 AVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTD 178

Query:   181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXX 240
             IKK+ +WGNHS + YPD  +A V G    +++N+ + W ++ F+P               
Sbjct:   179 IKKMTIWGNHSATQYPDLFHAEVAGKNAAEVVNDQA-WIEDEFIPTVAKRGAAIIDARGA 237

Query:   241 XXXXXXXXXXIDHIKDWIFGT--ENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQ 298
                       ID  +DW+ GT  ++WV+M + SDGSY VP+ +I  FPV  K   + I+ 
Sbjct:   238 SSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVS 297

Query:   299 NLEIDKFSRKKINLSIEELKNEILSISHL 327
              LEID+FSR +I+ S  EL +E  +++ L
Sbjct:   298 GLEIDEFSRGRIDKSTAELADERSAVTEL 326

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006099 "tricarboxylic acid cycle" evidence=IDA

GO:0030060 "L-malate dehydrogenase activity" evidence=IDA

FB|FBgn0262782 Mdh1 "Malate dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 140/332 (42%), Positives = 207/332 (62%)

Query:     2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
             + +P+R+ +TGAAGQI Y++++ IA G++ GKDQPI+L LL+         ++GV+ME+ 
Sbjct:     1 MAEPIRVVVTGAAGQIAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVG--VLEGVVMELA 58

Query:    62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
             DC  PLLV+V    +P   FKD + A L+G+ PRK  MER +LL+ N  IF  QG+AL+ 
Sbjct:    59 DCALPLLVEVVPTTDPAVGFKDVSAAFLVGAMPRKEGMERKDLLSANVKIFRTQGQALDK 118

Query:   122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
              A +DVKVLVVGNP NTN  +    AP +  +NF+AM RLD NRA +++A+KL  P+S++
Sbjct:   119 FAKKDVKVLVVGNPANTNALVCSSYAPSIPRENFSAMTRLDQNRATSQIAAKLGVPISAV 178

Query:   182 KKVFVWGNHSLSMYPDYRYA--TVNGVL--IRDMINNNSFWNKNVFLPXXXXXXXXXXXX 237
             K + +WGNHS + YPD   A  T NG +  + D IN+N +   + F+             
Sbjct:   179 KNIIIWGNHSSTQYPDAGQAKVTANGTVKSVVDAINDNGYLQGS-FVETVQKRGAAVIAA 237

Query:   238 XXXXXXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYK 295
                           DH+ DW  GT    +V+MG+ SDGSY+ PKD+IF FPV+IKN ++K
Sbjct:   238 RKMSSAMSAAKAACDHMHDWWNGTAPAQFVSMGVFSDGSYDSPKDVIFSFPVEIKNKQWK 297

Query:   296 IIQNLEIDKFSRKKINLSIEEL---KNEILSI 324
             I+  L +  F++ K++++ +EL   K+E LS+
Sbjct:   298 IVSGLTLSDFAKTKLSVTGKELQEEKDEALSV 329

GO:0030060 "L-malate dehydrogenase activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0046331 "lateral inhibition" evidence=IMP

ZFIN|ZDB-GENE-040204-1 mdh1a "malate dehydrogenase 1a, NAD (soluble)" [Danio rerio (taxid:7955)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 143/326 (43%), Positives = 197/326 (60%)

Query:     2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
             + +P+R+ +TGAAGQI Y++++ IA GD+ GKDQPIIL LL+ +       + GV+ME++
Sbjct:     1 MAEPIRVLVTGAAGQIAYSLLYSIAKGDVFGKDQPIILVLLDIT--PMLPVLDGVVMELQ 58

Query:    62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
             DC  PLL +V   +     FKD + AIL+GS PRK  MER +LL  N +IF  QG+AL  
Sbjct:    59 DCALPLLREVIPTDKVEVGFKDLDAAILVGSMPRKEGMERKDLLKANVAIFKTQGEALEK 118

Query:   122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
              A + VKVLVVGNP NTN  I  KSAP +  +NF+ + RLDHNRA +++A ++  P  S+
Sbjct:   119 YAKKTVKVLVVGNPANTNCLIASKSAPSIPKENFSCLTRLDHNRARSQVAMRVGVPSDSV 178

Query:   182 KKVFVWGNHSLSMYPDYRYATV--NGVLIR--DMINNNSFWNKNVFLPXXXXXXXXXXXX 237
             K V +WGNHS + YPD  +A V  NG  I   D +N+ S W K  F+             
Sbjct:   179 KNVTIWGNHSSTQYPDVHHAIVTRNGKEIAAFDAVNDES-WLKGDFISTVQQRGAAVIKA 237

Query:   238 XXXXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKY 294
                           DH++D  FGT +  WV+MGI S G SY VP D+++ FPVKIKN  +
Sbjct:   238 RKLSSAMSAAKAICDHMRDIWFGTPDGEWVSMGIYSSGNSYGVPDDLMYSFPVKIKNKSW 297

Query:   295 KIIQNLEIDKFSRKKINLSIEELKNE 320
             K++  L I+ FSR K++ +  EL  E
Sbjct:   298 KVVDGLSINDFSRGKMDATAAELVEE 323

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;ISS

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

TAIR|locus:2176441 c-NAD-MDH2 "cytosolic-NAD-dependent malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 136/326 (41%), Positives = 196/326 (60%)

Query:     1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
             M K+PVR+ +TGAAGQIGY ++  IA G +LG DQP+IL +L+     + +A+ GV ME+
Sbjct:     1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPF--AAEALNGVKMEL 58

Query:    61 EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
              D  FPLL  V    + + A    N+A+++G FPRK  MER ++++ N SI+  Q  AL 
Sbjct:    59 VDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALE 118

Query:   121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
               A+ + KVLVV NP NTN  I  + AP +  KN T + RLDHNRA+ +++ +L+ PVS 
Sbjct:   119 KHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSD 178

Query:   181 IKKVFVWGNHSLSMYPDYRYATVNGVL----IRDMINNNSFWNKNVFLPXXXXXXXXXXX 236
             +K V +WGNHS + YPD  +ATV   +    +R+++ N+  W    F+            
Sbjct:   179 VKNVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDE-WLNGEFISTVQQRGAAIIK 237

Query:   237 XXXXXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKY 294
                            DHI+DW+ GT    +V+MG+ SDGSYNVP  +I+ FPV  +N ++
Sbjct:   238 ARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEW 297

Query:   295 KIIQNLEIDKFSRKKINLSIEELKNE 320
              I+Q L ID  SRKK++L+ EELK E
Sbjct:   298 TIVQGLPIDDASRKKMDLTAEELKEE 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2165066 c-NAD-MDH3 "cytosolic-NAD-dependent malate dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 141/324 (43%), Positives = 193/324 (59%)

Query:     3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
             K P+R+ ITGAAG IGY I   IA G +LG DQP+IL LL+     S  +++ V ME++D
Sbjct:     9 KDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASS--SLEAVKMELQD 66

Query:    63 CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
               FPLL  V    N + A KD NI I+IG FPR + MER ++++ N  I+  Q  AL   
Sbjct:    67 SAFPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQASALERY 126

Query:   123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
             AS D KVLVV NP NTN  I  + AP +  +N T + RLDHNRA+A+LA KL+ PVSS+K
Sbjct:   127 ASDDCKVLVVANPANTNALILKEFAPSIPEENITCLTRLDHNRALAQLADKLSVPVSSVK 186

Query:   183 KVFVWGNHSLSMYPDYRYATVNGVL----IRDMINNNSFWNKNVFLPXXXXXXXXXXXXX 238
              V VWGNHS + YPD  +ATV+       +++++ +++ W KN F+              
Sbjct:   187 NVIVWGNHSSTQYPDTNHATVSTKTGDRPLKELVTDHN-WLKNEFIVEVQQRGAAVLRAR 245

Query:   239 XXXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKI 296
                          DHI+DW  GT    WV+MG+ SDGSY +P  +++ FPV  +   +KI
Sbjct:   246 KQSSAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGSYGIPPGLVYSFPVICEKGSWKI 305

Query:   297 IQNLEIDKFSRKKINLSIEELKNE 320
             +Q L ID+FSR+K++ S  EL  E
Sbjct:   306 VQGLSIDEFSREKMDDSARELAEE 329

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016020 "membrane" evidence=IDA

UNIPROTKB|P40925 MDH1 "Malate dehydrogenase, cytoplasmic" [Homo sapiens (taxid:9606)]

 Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
 Identities = 138/326 (42%), Positives = 197/326 (60%)

Query:     2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
             + +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ +       + GV+ME++
Sbjct:     1 MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMG--VLDGVLMELQ 58

Query:    62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
             DC  PLL DV   +    AFKD ++AIL+GS PR+  MER +LL  N  IF  QG AL+ 
Sbjct:    59 DCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDK 118

Query:   122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
              A + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA A++A KL    + +
Sbjct:   119 YAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDV 178

Query:   182 KKVFVWGNHSLSMYPDYRYATVN--G--VLIRDMINNNSFWNKNVFLPXXXXXXXXXXXX 237
             K V +WGNHS + YPD  +A V   G  V + + + ++S W K  F+             
Sbjct:   179 KNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS-WLKGEFVTTVQQRGAAVIKA 237

Query:   238 XXXXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKY 294
                           DH++D  FGT    +V+MG+ SDG SY VP D+++ FPV IKN  +
Sbjct:   238 RKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTW 297

Query:   295 KIIQNLEIDKFSRKKINLSIEELKNE 320
             K ++ L I+ FSR+K++L+ +EL  E
Sbjct:   298 KFVEGLPINDFSREKMDLTAKELTEE 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0047860 "diiodophenylpyruvate reductase activity" evidence=IEA

GO:0004470 "malic enzyme activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006094 "gluconeogenesis" evidence=TAS

GO:0030060 "L-malate dehydrogenase activity" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

UNIPROTKB|E2QV08 MDH1 "Malate dehydrogenase" [Canis lupus familiaris (taxid:9615)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 140/324 (43%), Positives = 194/324 (59%)

Query:     4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
             +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ +       + GV+ME++DC
Sbjct:    17 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMG--VLDGVLMELQDC 74

Query:    64 IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
               PLL DV   +    AFKD ++AIL+GS PR+  MER +LL  N  IF  QG AL   A
Sbjct:    75 ALPLLKDVIATDKEDVAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALEKYA 134

Query:   124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
              + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA A++A KL      +K 
Sbjct:   135 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKN 194

Query:   184 VFVWGNHSLSMYPDYRYATVN--G--VLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXX 239
             V +WGNHS + YPD  +A V   G  V + D + + S W K  F+               
Sbjct:   195 VIIWGNHSSTQYPDVSHAKVKLQGKEVGVYDALKDES-WLKGEFITTVQQRGAAVIKARK 253

Query:   240 XXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDGS-YNVPKDIIFGFPVKIKNSKYKI 296
                         DH++D  FGT    +V+MGI SDG+ Y VP D+++ FPV IKN  +KI
Sbjct:   254 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKI 313

Query:   297 IQNLEIDKFSRKKINLSIEELKNE 320
             ++ L I+ FSR+K++L+ +EL  E
Sbjct:   314 VEGLTINDFSREKMDLTAKELAEE 337

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:97051 Mdh1 "malate dehydrogenase 1, NAD (soluble)" [Mus musculus (taxid:10090)]

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 137/326 (42%), Positives = 195/326 (59%)

Query:     2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
             + +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ +       + GV+ME++
Sbjct:     1 MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMG--VLDGVLMELQ 58

Query:    62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
             DC  PLL DV   +    AFKD ++A+L+GS PR+  MER +LL  N  IF  QG AL  
Sbjct:    59 DCALPLLQDVIATDKEEIAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGTALEK 118

Query:   122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
              A + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA +++A KL      +
Sbjct:   119 YAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDV 178

Query:   182 KKVFVWGNHSLSMYPDYRYATVN--G--VLIRDMINNNSFWNKNVFLPXXXXXXXXXXXX 237
             K V +WGNHS + YPD  +A V   G  V + + + ++S W K  F+             
Sbjct:   179 KNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS-WLKGEFITTVQQRGAAVIKA 237

Query:   238 XXXXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKY 294
                           DHI+D  FGT    +V+MG+ SDG SY VP D+++ FPV IKN  +
Sbjct:   238 RKLSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTW 297

Query:   295 KIIQNLEIDKFSRKKINLSIEELKNE 320
             K ++ L I+ FSR+K++L+ +EL  E
Sbjct:   298 KFVEGLPINDFSREKMDLTAKELTEE 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005829 "cytosol" evidence=ISO

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=ISO

GO:0006108 "malate metabolic process" evidence=ISO

GO:0006734 "NADH metabolic process" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=ISO

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0019674 "NAD metabolic process" evidence=ISO

GO:0030060 "L-malate dehydrogenase activity" evidence=ISO

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

RGD|3072 Mdh1 "malate dehydrogenase 1, NAD (soluble)" [Rattus norvegicus (taxid:10116)]

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 137/326 (42%), Positives = 195/326 (59%)

Query:     2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
             + +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ +       + GV+ME++
Sbjct:     1 MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMG--VLDGVLMELQ 58

Query:    62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
             DC  PLL DV   +    AFKD ++A+L+GS PR+  MER +LL  N  IF  QG AL  
Sbjct:    59 DCALPLLQDVIATDKEEVAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGAALEK 118

Query:   122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
              A + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA +++A KL      +
Sbjct:   119 YAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDV 178

Query:   182 KKVFVWGNHSLSMYPDYRYATVN--G--VLIRDMINNNSFWNKNVFLPXXXXXXXXXXXX 237
             K V +WGNHS + YPD  +A V   G  V + + + ++S W K  F+             
Sbjct:   179 KNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS-WLKGEFITTVQQRGAAVIKA 237

Query:   238 XXXXXXXXXXXXXIDHIKDWIFGTEN--WVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKY 294
                           DHI+D  FGT    +V+MG+ SDG SY VP D+++ FPV IKN  +
Sbjct:   238 RKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTW 297

Query:   295 KIIQNLEIDKFSRKKINLSIEELKNE 320
             K ++ L I+ FSR+K++L+ +EL  E
Sbjct:   298 KFVEGLPINDFSREKMDLTAKELTEE 323

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005813 "centrosome" evidence=IEA;ISO

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=IDA

GO:0006108 "malate metabolic process" evidence=IDA

GO:0006734 "NADH metabolic process" evidence=IDA

GO:0016615 "malate dehydrogenase activity" evidence=IDA

GO:0019674 "NAD metabolic process" evidence=IDA

GO:0030060 "L-malate dehydrogenase activity" evidence=IDA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A1TP96	MDH_ACIAC	1, ., 1, ., 1, ., 3, 7	0.5957	0.9939	0.9969	yes	N/A
Q8PC25	MDH_XANCP	1, ., 1, ., 1, ., 3, 7	0.5853	0.9908	0.9939	yes	N/A
B9MBP0	MDH_ACIET	1, ., 1, ., 1, ., 3, 7	0.6018	0.9939	0.9969	yes	N/A
A4G5Z9	MDH_HERAR	1, ., 1, ., 1, ., 3, 7	0.6291	0.9939	0.9939	yes	N/A
A9BVK0	MDH_DELAS	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q7W5Q8	MDH_BORPA	1, ., 1, ., 1, ., 3, 7	0.5848	0.9969	0.9969	yes	N/A
B1XV63	MDH_POLNS	1, ., 1, ., 1, ., 3, 7	0.6018	0.9939	0.9939	yes	N/A
B2FQL8	MDH_STRMK	1, ., 1, ., 1, ., 3, 7	0.5823	0.9908	0.9939	yes	N/A
B0VQX5	MDH_ACIBS	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q21XH1	MDH1_RHOFD	1, ., 1, ., 1, ., 3, 7	0.6170	0.9939	0.9969	yes	N/A
Q1BM38	MDH_BURCA	1, ., 1, ., 1, ., 3, 7	0.5848	0.9908	0.9939	yes	N/A
B7I9D2	MDH_ACIB5	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q8XXW5	MDH_RALSO	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9939	yes	N/A
B1Y8A3	MDH_LEPCP	1, ., 1, ., 1, ., 3, 7	0.5927	0.9939	0.9969	yes	N/A
A2SHT9	MDH_METPP	1, ., 1, ., 1, ., 3, 7	0.6231	0.9939	0.9969	yes	N/A
Q1LKG0	MDH_RALME	1, ., 1, ., 1, ., 3, 7	0.5957	0.9878	0.9938	yes	N/A
Q2T7J2	MDH1_BURTA	1, ., 1, ., 1, ., 3, 7	0.5848	0.9908	0.9969	yes	N/A
B2T9P8	MDH_BURPP	1, ., 1, ., 1, ., 3, 7	0.5927	0.9878	0.9938	yes	N/A
Q8PNP8	MDH_XANAC	1, ., 1, ., 1, ., 3, 7	0.5884	0.9908	0.9939	yes	N/A
Q126N9	MDH_POLSJ	1, ., 1, ., 1, ., 3, 7	0.6170	0.9939	0.9969	yes	N/A
Q46YU4	MDH_CUPPJ	1, ., 1, ., 1, ., 3, 7	0.5927	0.9878	0.9938	yes	N/A
B1K394	MDH_BURCC	1, ., 1, ., 1, ., 3, 7	0.5848	0.9908	0.9939	yes	N/A
A0AZ43	MDH_BURCH	1, ., 1, ., 1, ., 3, 7	0.5848	0.9908	0.9939	yes	N/A
B0V6R7	MDH_ACIBY	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q9ZF99	MDH_AQUAR	1, ., 1, ., 1, ., 3, 7	0.6048	0.9939	0.9939	N/A	N/A
A9AMD5	MDH_BURM1	1, ., 1, ., 1, ., 3, 7	0.5878	0.9908	0.9939	yes	N/A
A9IIS3	MDH_BORPD	1, ., 1, ., 1, ., 3, 7	0.5848	0.9969	0.9969	yes	N/A
A1VRQ1	MDH_POLNA	1, ., 1, ., 1, ., 3, 7	0.6079	0.9939	0.9969	yes	N/A
B2JQD2	MDH_BURP8	1, ., 1, ., 1, ., 3, 7	0.5927	0.9878	0.9938	yes	N/A
Q9PE17	MDH_XYLFA	1, ., 1, ., 1, ., 3, 7	0.5805	0.9939	0.9969	yes	N/A
Q0K8F5	MDH_CUPNH	1, ., 1, ., 1, ., 3, 7	0.5927	0.9878	0.9938	yes	N/A
B4EFB0	MDH_BURCJ	1, ., 1, ., 1, ., 3, 7	0.5848	0.9908	0.9939	yes	N/A
Q3BWU8	MDH_XANC5	1, ., 1, ., 1, ., 3, 7	0.5884	0.9908	0.9939	yes	N/A
A4JM71	MDH2_BURVG	1, ., 1, ., 1, ., 3, 7	0.5848	0.9908	0.9939	yes	N/A
Q4URH2	MDH_XANC8	1, ., 1, ., 1, ., 3, 7	0.5853	0.9908	0.9939	yes	N/A
A3M928	MDH_ACIBT	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q2L068	MDH_BORA1	1, ., 1, ., 1, ., 3, 7	0.5848	0.9969	0.9969	yes	N/A
A1W9K7	MDH_ACISJ	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q7WD94	MDH_BORBR	1, ., 1, ., 1, ., 3, 7	0.5848	0.9969	0.9969	yes	N/A
B2HZ52	MDH_ACIBC	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
B7GW58	MDH_ACIB3	1, ., 1, ., 1, ., 3, 7	0.5987	0.9939	0.9969	yes	N/A
Q6F7X1	MDH_ACIAD	1, ., 1, ., 1, ., 3, 7	0.5866	0.9939	0.9969	yes	N/A
Q7VW97	MDH_BORPE	1, ., 1, ., 1, ., 3, 7	0.5848	0.9969	0.9969	yes	N/A
Q13S42	MDH_BURXL	1, ., 1, ., 1, ., 3, 7	0.5927	0.9878	0.9938	yes	N/A
A4SWW0	MDH_POLSQ	1, ., 1, ., 1, ., 3, 7	0.6018	0.9939	0.9939	yes	N/A
B2U705	MDH_RALPJ	1, ., 1, ., 1, ., 3, 7	0.6079	0.9939	0.9969	yes	N/A
C5CSI5	MDH_VARPS	1, ., 1, ., 1, ., 3, 7	0.6170	0.9939	0.9969	yes	N/A
B3R570	MDH_CUPTR	1, ., 1, ., 1, ., 3, 7	0.5896	0.9878	0.9938	yes	N/A
A6SY47	MDH_JANMA	1, ., 1, ., 1, ., 3, 7	0.6322	0.9939	0.9939	yes	N/A
A1WR02	MDH_VEREI	1, ., 1, ., 1, ., 3, 7	0.5896	0.9939	0.9969	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
3rd Layer	1.1.1.37	0.991

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	329
PRK05442	326	PRK05442, PRK05442, malate dehydrogenase; Provisio	0.0
cd01338	322	cd01338, MDH_choloroplast_like, Chloroplast-like m	1e-177
cd01336	325	cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic an	1e-156
TIGR01759	323	TIGR01759, MalateDH-SF1, malate dehydrogenase	1e-154
cd00704	323	cd00704, MDH, Malate dehydrogenase	1e-143
TIGR01758	324	TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-	1e-126
PLN00135	309	PLN00135, PLN00135, malate dehydrogenase	1e-107
PLN00112	444	PLN00112, PLN00112, malate dehydrogenase (NADP); P	1e-104
TIGR01757	387	TIGR01757, Malate-DH_plant, malate dehydrogenase,	7e-94
COG0039	313	COG0039, Mdh, Malate/lactate dehydrogenases [Energ	2e-83
TIGR01756	313	TIGR01756, LDH_protist, lactate dehydrogenase	4e-80
cd05295	452	cd05295, MDH_like, Malate dehydrogenase-like	5e-56
cd00650	263	cd00650, LDH_MDH_like, NAD-dependent, lactate dehy	4e-49
pfam02866	173	pfam02866, Ldh_1_C, lactate/malate dehydrogenase,	1e-39
pfam00056	142	pfam00056, Ldh_1_N, lactate/malate dehydrogenase,	4e-31
PTZ00117	319	PTZ00117, PTZ00117, malate dehydrogenase; Provisio	3e-19
cd01339	300	cd01339, LDH-like_MDH, L-lactate dehydrogenase-lik	2e-18
PRK06223	307	PRK06223, PRK06223, malate dehydrogenase; Reviewed	4e-15
cd05294	309	cd05294, LDH-like_MDH_nadp, A lactate dehydrogenas	9e-15
cd00300	300	cd00300, LDH_like, L-lactate dehydrogenase-like en	2e-13
TIGR01763	305	TIGR01763, MalateDH_bact, malate dehydrogenase, NA	3e-12
PTZ00082	321	PTZ00082, PTZ00082, L-lactate dehydrogenase; Provi	6e-11
TIGR01771	299	TIGR01771, L-LDH-NAD, L-lactate dehydrogenase	7e-10
cd05291	306	cd05291, HicDH_like, L-2-hydroxyisocapronate dehyd	7e-07
PRK00066	315	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	7e-07
TIGR01772	312	TIGR01772, MDH_euk_gproteo, malate dehydrogenase,	2e-06
PRK05086	312	PRK05086, PRK05086, malate dehydrogenase; Provisio	8e-04
cd01337	310	cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysoma	0.001

>gnl|CDD|235468 PRK05442, PRK05442, malate dehydrogenase; Provisional

 Score =  535 bits (1381), Expect = 0.0
 Identities = 188/327 (57%), Positives = 256/327 (78%), Gaps = 5/327 (1%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           K PVR+++TGAAGQIGY+++FRIA+GD+LGKDQP+ILQLLE     + KA++GV+ME++D
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIP--PALKALEGVVMELDD 59

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
           C FPLL  V + ++P  AFKDA++A+L+G+ PR   MER +LL  N +IF  QGKALN V
Sbjct: 60  CAFPLLAGVVITDDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV 119

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           A+RDVKVLVVGNP NTN  I MK+APDL  +NFTAM RLDHNRA+++LA+K   PV+ IK
Sbjct: 120 AARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLDHNRALSQLAAKAGVPVADIK 179

Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242
           K+ VWGNHS + YPD+R+AT++G    ++IN+ + W ++ F+P + +RG  II  RGASS
Sbjct: 180 KMTVWGNHSATQYPDFRHATIDGKPAAEVINDQA-WLEDTFIPTVQKRGAAIIEARGASS 238

Query: 243 AASAASAAIDHIKDWIFGTEN--WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNL 300
           AASAA+AAIDH++DW+ GT    WV+MG+PSDGSY +P+ +IFGFPV  +N +Y+I+Q L
Sbjct: 239 AASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGL 298

Query: 301 EIDKFSRKKINLSIEELKNEILSISHL 327
           EID FSR+KI+ ++ EL+ E  ++ HL
Sbjct: 299 EIDDFSREKIDATLAELEEERDAVKHL 325

Length = 326

>gnl|CDD|133423 cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases

 Score =  492 bits (1269), Expect = e-177
 Identities = 175/325 (53%), Positives = 241/325 (74%), Gaps = 5/325 (1%)

Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           KPVR+++TGAAGQIGY+++FRIA+G++ G DQP+ILQLLE     + KA++GV ME+EDC
Sbjct: 1   KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQ--ALKALEGVAMELEDC 58

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
            FPLL ++ + ++P  AFKDA+ A+L+G+ PR   MER++LL  N  IF  QGKALN VA
Sbjct: 59  AFPLLAEIVITDDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVA 118

Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
           SRDVKVLVVGNP NTN  I MK+APD+   NFTAM RLDHNRA ++LA K   PV+ +K 
Sbjct: 119 SRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN 178

Query: 184 VFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSA 243
           + +WGNHS + YPD+  AT+ G    ++IN+ + W ++ F+P + +RG  II  RGASSA
Sbjct: 179 MVIWGNHSPTQYPDFTNATIGGKPAAEVINDRA-WLEDEFIPTVQKRGAAIIKARGASSA 237

Query: 244 ASAASAAIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLE 301
           ASAA+AAIDH++DW+ GT   +W +M +PSDGSY +P+ +IF FPV+ K   Y+I++ LE
Sbjct: 238 ASAANAAIDHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGLE 297

Query: 302 IDKFSRKKINLSIEELKNEILSISH 326
           ID F+R+KI+ ++ EL  E  ++ H
Sbjct: 298 IDDFAREKIDATLAELLEEREAVKH 322

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 322

>gnl|CDD|133421 cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic and cytosolic Malate dehydrogenases

 Score =  439 bits (1132), Expect = e-156
 Identities = 161/322 (50%), Positives = 217/322 (67%), Gaps = 9/322 (2%)

Query: 5   PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI 64
           P+R+ +TGAAGQI Y+++  IA GD+ G DQP+IL LL+       KA++GV+ME++DC 
Sbjct: 2   PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL--KALEGVVMELQDCA 59

Query: 65  FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
           FPLL  V    +P  AFKD ++AIL+G+ PRK  MER +LL  N  IF EQG+AL+  A 
Sbjct: 60  FPLLKSVVATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAK 119

Query: 125 RDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV 184
           ++VKVLVVGNP NTN  I +K AP +  +NFTA+ RLDHNRA +++A KL  PVS +K V
Sbjct: 120 KNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNRAKSQIALKLGVPVSDVKNV 179

Query: 185 FVWGNHSLSMYPDYRYATVN----GVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
            +WGNHS + YPD  +ATV     G   R+ + +++ W    F+  + +RG  +I  R  
Sbjct: 180 IIWGNHSSTQYPDVNHATVELNGKGKPAREAVKDDA-WLNGEFISTVQKRGAAVIKARKL 238

Query: 241 SSAASAASAAIDHIKDWIFGTEN--WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQ 298
           SSA SAA A  DH+ DW FGT    +V+MG+ SDGSY VP+ +IF FPV  KN K+KI+Q
Sbjct: 239 SSAMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQ 298

Query: 299 NLEIDKFSRKKINLSIEELKNE 320
            L ID FSR+KI+ + +EL  E
Sbjct: 299 GLSIDDFSREKIDATAKELVEE 320

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 325

>gnl|CDD|130820 TIGR01759, MalateDH-SF1, malate dehydrogenase

 Score =  435 bits (1121), Expect = e-154
 Identities = 171/322 (53%), Positives = 237/322 (73%), Gaps = 7/322 (2%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           KKPVR+++TGAAGQIGY+++FRIA+G+L GKDQP++L LL+     + KA++GV ME+ED
Sbjct: 1   KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDI--PPAMKALEGVAMELED 58

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
           C FPLL  V    +P  AFKD + A+L+G+FPRK  MER++LL+ N  IF EQGKALN V
Sbjct: 59  CAFPLLAGVVATTDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           A +DVKVLVVGNP NTN  I  K+APD+  KNF+AM RLDHNRA  +LA+K   PVS +K
Sbjct: 119 AKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVK 178

Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242
            V +WGNHS +  PD+ +ATV+G  ++++I ++  W +  F+P + +RG  +I  RGASS
Sbjct: 179 NVIIWGNHSNTQVPDFTHATVDGRPVKEVIKDDK-WLEGEFIPTVQQRGAAVIEARGASS 237

Query: 243 AASAASAAIDHIKDWIFGT--ENWVTMGIPSDG-SYNVPKDIIFGFPVKIK-NSKYKIIQ 298
           AASAA+AAIDH++DW+ GT   +WV+MG+ SDG  Y +P+ IIF FPV  K + +++I++
Sbjct: 238 AASAANAAIDHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVE 297

Query: 299 NLEIDKFSRKKINLSIEELKNE 320
            L +D F R K++ + +EL  E
Sbjct: 298 GLPLDDFVRGKLDATEDELLEE 319

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. Length = 323

>gnl|CDD|133420 cd00704, MDH, Malate dehydrogenase

 Score =  407 bits (1049), Expect = e-143
 Identities = 157/321 (48%), Positives = 215/321 (66%), Gaps = 9/321 (2%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           + + ITGAAGQIGYN++F IA+G+L G DQP+IL LL+     + KA++GV+ME++DC F
Sbjct: 1   LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLD--IPPAMKALEGVVMELQDCAF 58

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
           PLL  V +  +P  AFKD ++AIL+G+FPRK  MER++LL  N+ IF EQG+ALN VA  
Sbjct: 59  PLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKP 118

Query: 126 DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVF 185
            VKVLVVGNP NTN  I +K+AP+L  KNFTA+ RLDHNRA A++A KL   VS +K V 
Sbjct: 119 TVKVLVVGNPANTNALIALKNAPNLPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVI 178

Query: 186 VWGNHSLSMYPDYRYATV---NGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242
           +WGNHS +  PD   A V    G      + +  + N + F+  + +RG  II  RGASS
Sbjct: 179 IWGNHSNTQVPDLSNAVVYGPGGTEWVLDLLDEEWLN-DEFVKTVQKRGAAIIKKRGASS 237

Query: 243 AASAASAAIDHIKDWIFGTE--NWVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKYKIIQN 299
           AASAA A  DH+KDW+FGT     V+MG+ S G  Y +P  I+F FP   K   + ++++
Sbjct: 238 AASAAKAIADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVED 297

Query: 300 LEIDKFSRKKINLSIEELKNE 320
           L+++ + R+K+  + EEL  E
Sbjct: 298 LKLNDWLREKLKATEEELIEE 318

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 323

>gnl|CDD|130819 TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-dependent

 Score =  364 bits (936), Expect = e-126
 Identities = 156/321 (48%), Positives = 214/321 (66%), Gaps = 10/321 (3%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           R+ +TGAAGQIGY ++  IA G +LGKDQPIIL LL+       K ++GV+ME+ DC FP
Sbjct: 1   RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--KVLEGVVMELMDCAFP 58

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
           LL  V    +P  AF D ++AIL+G+FPRK  MER +LL+ N  IF EQG+AL+ +A +D
Sbjct: 59  LLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKD 118

Query: 127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFV 186
            KVLVVGNP NTN  +    AP +  KNF+A+ RLDHNRA+A++A +   PVS +K V +
Sbjct: 119 CKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVII 178

Query: 187 WGNHSLSMYPDYRYATVNG----VLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242
           WGNHS + YPD  +ATV        +R+ I +++ +    F+  + +RG  II  R  SS
Sbjct: 179 WGNHSSTQYPDVNHATVTKGGKQKPVREAIKDDA-YLDGEFITTVQQRGAAIIRARKLSS 237

Query: 243 AASAASAAIDHIKDWIFGTE--NWVTMGIPSDGS-YNVPKDIIFGFPVKIKNSKYKIIQN 299
           A SAA AA+D + DW+ GT    +V+MG+ SDGS Y VPK +IF FPV  KN ++KI++ 
Sbjct: 238 ALSAAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEG 297

Query: 300 LEIDKFSRKKINLSIEELKNE 320
           L +D  SRKK+ L+ +EL+ E
Sbjct: 298 LCVDDSSRKKLALTAKELEEE 318

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography. Length = 324

>gnl|CDD|177744 PLN00135, PLN00135, malate dehydrogenase

 Score =  315 bits (809), Expect = e-107
 Identities = 135/302 (44%), Positives = 192/302 (63%), Gaps = 9/302 (2%)

Query: 25  IANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84
           IA G +LG DQP+IL +L+     + +A+ GV ME+ D  FPLL  V    + + A K  
Sbjct: 2   IARGVMLGPDQPVILHMLDI--PPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGV 59

Query: 85  NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM 144
           NIA+++G FPRK  MER ++++ N SI+  Q  AL   A+ D KVLVV NP NTN  I  
Sbjct: 60  NIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILK 119

Query: 145 KSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN 204
           + AP +  KN T + RLDHNRA+ +++ +L  PVS +K V +WGNHS + YPD  +ATV 
Sbjct: 120 EFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSSTQYPDVNHATVK 179

Query: 205 ----GVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFG 260
                  +R+++ +++ W    F+  + +RG  II  R  SSA SAAS+A DHI+DW+ G
Sbjct: 180 TPSGEKPVRELVADDA-WLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLG 238

Query: 261 TE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELK 318
           T    WV+MG+ SDGSY VP  +I+ FPV  +  ++ I+Q L ID+FSRKK++ + +ELK
Sbjct: 239 TPEGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGLSIDEFSRKKMDATAKELK 298

Query: 319 NE 320
            E
Sbjct: 299 EE 300

Length = 309

>gnl|CDD|215060 PLN00112, PLN00112, malate dehydrogenase (NADP); Provisional

 Score =  312 bits (802), Expect = e-104
 Identities = 139/330 (42%), Positives = 218/330 (66%), Gaps = 7/330 (2%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           KK + ++++GAAG I  +++F++A+G++ G DQPI L+LL   +++S++A++GV ME+ED
Sbjct: 98  KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLL--GSERSKQALEGVAMELED 155

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
            ++PLL +VS+  +P   F+DA  A+LIG+ PR   MER++LL IN  IF EQGKALN V
Sbjct: 156 SLYPLLREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEV 215

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           ASR+VKV+VVGNP NTN  I +K+AP++  KNF A+ RLD NRA  +LA K       + 
Sbjct: 216 ASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVS 275

Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242
            V +WGNHS +  PD+  A +NG+ ++++I ++  W +  F P + +RG  +I   G SS
Sbjct: 276 NVTIWGNHSTTQVPDFLNAKINGLPVKEVITDHK-WLEEEFTPKVQKRGGVLIKKWGRSS 334

Query: 243 AASAASAAIDHIKDWIFGTE--NWVTMGIPSDGS-YNVPKDIIFGFPVKIK-NSKYKIIQ 298
           AAS A +  D IK  +  T   +W + G+ +DG+ Y + + ++F  P + K +  Y+I++
Sbjct: 335 AASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVK 394

Query: 299 NLEIDKFSRKKINLSIEELKNEILSISHLI 328
           ++EID + R++I  S  EL  E   ++HL 
Sbjct: 395 DVEIDDYLRERIKKSEAELLAEKRCVAHLT 424

Length = 444

>gnl|CDD|130818 TIGR01757, Malate-DH_plant, malate dehydrogenase, NADP-dependent

 Score =  283 bits (726), Expect = 7e-94
 Identities = 138/330 (41%), Positives = 217/330 (65%), Gaps = 7/330 (2%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           KK V ++++GAAG I  +++F +A+G++ G+DQPI L+LL   +++S++A++GV ME+ED
Sbjct: 42  KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLL--GSERSKEALEGVAMELED 99

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
            ++PLL +VS+  +P   F+DA+ A+LIG+ PR   MER++LL IN  IF +QGKALN+V
Sbjct: 100 SLYPLLREVSIGIDPYEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAV 159

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           AS++ KVLVVGNP NTN  I MK+AP++  KNF A+ RLD NRA  +LA K  +  +S+ 
Sbjct: 160 ASKNCKVLVVGNPCNTNALIAMKNAPNIPRKNFHALTRLDENRAKCQLALKSGKFYTSVS 219

Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242
            V +WGNHS +  PD+  A + G   +++I +   W +  F P + +RG  +I   G SS
Sbjct: 220 NVTIWGNHSTTQVPDFVNAKIGGRPAKEVIKDTK-WLEEEFTPTVQKRGGALIKKWGRSS 278

Query: 243 AASAASAAIDHIKDWIFGTE--NWVTMGIPSDGS-YNVPKDIIFGFPVKIK-NSKYKIIQ 298
           AAS A +  D IK  +  T   +W + G+ +DG+ Y + + ++F  P + K +  Y++  
Sbjct: 279 AASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELAT 338

Query: 299 NLEIDKFSRKKINLSIEELKNEILSISHLI 328
           ++ +D F R++I  S +EL  E   ++HLI
Sbjct: 339 DVSMDDFLRERIRKSEDELLKEKECVAHLI 368

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. Length = 387

>gnl|CDD|223117 COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion]

 Score =  254 bits (651), Expect = 2e-83
 Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 16/325 (4%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++++ GA G +G ++ F +     LG +    L L++     +++  +GV +++     
Sbjct: 1   MKVAVIGA-GNVGSSLAFLLLL-QGLGSE----LVLID----INEEKAEGVALDLSHAAA 50

Query: 66  PLLVDVSV-HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
           PL  DV +  +      K A+I ++    PRK  M R +LL  N+ I  +  KA+   A 
Sbjct: 51  PLGSDVKITGDGDYEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAP 110

Query: 125 RDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV 184
            D  VLVV NPV+  TYI MK +     +   +   LD  R    LA KL      +   
Sbjct: 111 -DAIVLVVTNPVDILTYIAMKFSGFPKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVH-A 168

Query: 185 FVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAA 244
           +V G H  +M P +  ATV G  + +++  ++  +    +  +   G EII  +GA +  
Sbjct: 169 YVIGEHGDTMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAGTYY 228

Query: 245 SAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEID 303
             A+A    ++  +   +  + + +  DG Y   +D+ FG P  + KN   +I+  L + 
Sbjct: 229 GPAAALARMVEAILRDEKRVLPVSVYLDGEYG-VEDVYFGVPAVLGKNGVEEIL-ELLLS 286

Query: 304 KFSRKKINLSIEELKNEILSISHLI 328
              ++K++ S EELK  I  +  L+
Sbjct: 287 DDEQEKLDKSAEELKKNIELVKELV 311

Length = 313

>gnl|CDD|130817 TIGR01756, LDH_protist, lactate dehydrogenase

 Score =  246 bits (629), Expect = 4e-80
 Identities = 117/307 (38%), Positives = 177/307 (57%), Gaps = 14/307 (4%)

Query: 23  FRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82
             IANGDL G ++P+ L LLE     +   ++ + ME+EDC FP L    V      AFK
Sbjct: 3   HWIANGDLYG-NRPVCLHLLEI--PPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFK 59

Query: 83  DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYI 142
           D + A L+ S P K    R++LL  N+ IF   G+AL+  A   VKVLV+GNPVNTN  +
Sbjct: 60  DIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLV 119

Query: 143 TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYAT 202
            M  AP LS +NF+++  LDHNRA++++ASKL  PV  I  V VWGNH+ SM  D  +A 
Sbjct: 120 AMLHAPKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAESMVADLTHAE 179

Query: 203 V--NGV--LIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWI 258
              NG    + D +  +  + +  F   I++R  +I+ +RG +SAAS   A++ H+K W+
Sbjct: 180 FTKNGKHQKVFDELCRD--YPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWL 237

Query: 259 FGTE--NWVTMGI--PSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS 313
           FGT     ++MGI  P    Y +   +IF FP  + ++ K  +++N E++ + + K+  +
Sbjct: 238 FGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQT 297

Query: 314 IEELKNE 320
            ++L  E
Sbjct: 298 EKDLFEE 304

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule. Length = 313

>gnl|CDD|133431 cd05295, MDH_like, Malate dehydrogenase-like

 Score =  187 bits (478), Expect = 5e-56
 Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 26/340 (7%)

Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
            P+++ IT A+  + Y++I  +A+G++ G ++ I + LL   + ++ + +KG++ME+ED 
Sbjct: 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLL--DSPENLEKLKGLVMEVEDL 179

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
            FPLL  +SV  +   AFKDA++ +L+  F  K   +    +    +I    G  +   A
Sbjct: 180 AFPLLRGISVTTDLDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA 239

Query: 124 SRDVKVLVVG-NPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
             DVKV+V G   +N  T I +K AP +  KN  A+ RL  NRA A LA KLN   + IK
Sbjct: 240 KEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQENRAKALLARKLNVNSAGIK 299

Query: 183 KVFVWGNHSLSMYPDYRYATVNG--------------VLIRDMINNNSFWNKNVFLPAIS 228
            V VWGN   + Y D   A V                VL  ++++++  W    F+  + 
Sbjct: 300 DVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVL--ELVHDSK-WINGEFVATLK 356

Query: 229 RRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSYNVPKDIIFGFP 286
                  S     +A S A A    +  W  G+      ++G+ S+G Y +P+ I+F  P
Sbjct: 357 SLS----SSLNHEAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMP 412

Query: 287 VKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISH 326
           VK +N  ++++ +LE+ +  R+ +     +L  E L    
Sbjct: 413 VKFQNGSWEVVTDLELSEILREVLKRITSDLIQEKLVALG 452

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 452

>gnl|CDD|133419 cd00650, LDH_MDH_like, NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

 Score =  164 bits (418), Expect = 4e-49
 Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 54/315 (17%)

Query: 8   ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL 67
           I++ GA G +G  + F +A+G        I L L +   +K    +KGV M+++D + PL
Sbjct: 1   IAVIGAGGNVGPALAFGLADG---SVLLAIELVLYDIDEEK----LKGVAMDLQDAVEPL 53

Query: 68  -LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
             + VS+ ++P  AFKDA++ I+     RK  M R +LL  N  I  E G  +   +  D
Sbjct: 54  ADIKVSITDDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSP-D 112

Query: 127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFV 186
             ++VV NPV+  TY+  + +  L  +    +  LD  R    LA KL      + KV++
Sbjct: 113 AWIIVVSNPVDIITYLVWRYSG-LPKEKVIGLGTLDPIRFRRILAEKLGVDPDDV-KVYI 170

Query: 187 WGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASA 246
            G H  S  PD+                                                
Sbjct: 171 LGEHGGSQVPDWSTVR-------------------------------------------I 187

Query: 247 ASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFS 306
           A++  D I+  +      + +G+ ++G   +P D++   P  +  +  +    + +  F 
Sbjct: 188 ATSIADLIRSLLNDEGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEVGLTDFE 247

Query: 307 RKKINLSIEELKNEI 321
            +K+  S + LK E+
Sbjct: 248 LEKLQKSADTLKKEL 262

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 263

>gnl|CDD|202437 pfam02866, Ldh_1_C, lactate/malate dehydrogenase, alpha/beta C-terminal domain

 Score =  137 bits (346), Expect = 1e-39
 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 5/166 (3%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---S 216
            LD  RA   LA K      S+  V+V G HS + +PD+ +A V  + +   +  N   +
Sbjct: 2   TLDTARARTFLAEKFGVDPRSVN-VYVIGEHSGTQFPDWSHAKVTIIPLISQVKENLKDT 60

Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
            W     +  +   G E+I  +  S+  S A AA    K  + GT   +++G+  DG Y 
Sbjct: 61  DWELEELIERVQNAGYEVIEAKAGSTTYSMAYAAARIAKAILRGTGGVLSVGVYLDGYYG 120

Query: 277 VPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            P DI F  PV + K+   K+++ L ++ F R+K+  S  ELK EI
Sbjct: 121 SPDDIYFSVPVVLGKDGVEKVVEILPLNDFEREKLEKSAAELKKEI 166

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. Length = 173

>gnl|CDD|200963 pfam00056, Ldh_1_N, lactate/malate dehydrogenase, NAD binding domain

 Score =  113 bits (286), Expect = 4e-31
 Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 10/152 (6%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           V++++ GA G +G ++ F +A   L   +    L L++ +    +   +GV M++     
Sbjct: 1   VKVAVVGAGGGVGSSLAFALALQGL-ADE----LVLVDIN----KDKAEGVAMDLSHGST 51

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
            L V   V  +   A KDA++ ++    PRK  M R +LL  N+ IF +   A+   A  
Sbjct: 52  FLSVPGIVGGDDYEALKDADVVVITAGVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAP- 110

Query: 126 DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA 157
           D  VLVV NPV+  TYI  K +     +   +
Sbjct: 111 DAIVLVVSNPVDILTYIAWKVSGLPPERVIGS 142

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold. Length = 142

>gnl|CDD|173409 PTZ00117, PTZ00117, malate dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 3e-19
 Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 12/260 (4%)

Query: 75  ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134
            N     KD+++ ++     RK  M R +LL IN  I     +++         V+ V N
Sbjct: 65  TNNYEDIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAF-VICVTN 123

Query: 135 PVNTNTYITMKSAPDLSYKNFTAML-RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLS 193
           P++    +  +    +       M   LD +R    LA KL      +  V V G H   
Sbjct: 124 PLDCMVKV-FQEKSGIPSNKICGMAGVLDSSRFRCNLAEKLGVSPGDVSAV-VIGGHGDL 181

Query: 194 MYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASSAASAASA 249
           M P  RY TVNG+ + D +   +   K   +  I ++    G EI+ +    SA  A +A
Sbjct: 182 MVPLPRYCTVNGIPLSDFVKKGAITEKE--INEIIKKTRNMGGEIVKLLKKGSAFFAPAA 239

Query: 250 AI-DHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRK 308
           AI   I+ ++   +  +   +  +G YN  K++  G PV I     + +  LE++   ++
Sbjct: 240 AIVAMIEAYLKDEKRVLVCSVYLNGQYNC-KNLFVGVPVVIGGKGIEKVIELELNAEEKE 298

Query: 309 KINLSIEELKNEILSISHLI 328
             + SIE ++        LI
Sbjct: 299 LFDKSIESIQELTQKAKALI 318

Length = 319

>gnl|CDD|133424 cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins

 Score = 83.7 bits (208), Expect = 2e-18
 Identities = 88/334 (26%), Positives = 142/334 (42%), Gaps = 55/334 (16%)

Query: 8   ISITGAAGQIGYNIIFRIAN---GDLL------GKDQPIILQLLEASNKKSQKAIKGVIM 58
           ISI GA G +G  +   +A    GD++      G  Q   L + +A+       I G   
Sbjct: 1   ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAA------PILGS-- 51

Query: 59  EIEDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGK 117
                      D  V   N       +++ ++    PRK  M R +LL  N+ I  E  +
Sbjct: 52  -----------DTKVTGTNDYEDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAE 100

Query: 118 ALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML-RLDHNRAIAKLASKLNE 176
            +   A  +  V+VV NP++  TY+  K++          M   LD  R    +A +L  
Sbjct: 101 NIKKYAP-NAIVIVVTNPLDVMTYVAYKAS-GFPRNRVIGMAGVLDSARFRYFIAEELGV 158

Query: 177 PVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GE 232
            V  + +  V G H  +M P  RY+TV G+ + ++I           +  I  R    G 
Sbjct: 159 SVKDV-QAMVLGGHGDTMVPLPRYSTVGGIPLTELITKEE-------IDEIVERTRNGGA 210

Query: 233 EIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPKDIIFGFPVK 288
           EI+++    SA  A +AAI  + + I   +  V   +P     +G Y + KDI  G PV 
Sbjct: 211 EIVNLLKTGSAYYAPAAAIAEMVEAILKDKKRV---LPCSAYLEGEYGI-KDIFVGVPVV 266

Query: 289 I-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           + KN   KII+ L++    ++  + S+E +K  I
Sbjct: 267 LGKNGVEKIIE-LDLTDEEKEAFDKSVESVKELI 299

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|180477 PRK06223, PRK06223, malate dehydrogenase; Reviewed

 Score = 74.4 bits (184), Expect = 4e-15
 Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 43/333 (12%)

Query: 7   RISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           +ISI GA G +G  +   +A    GD++  D  I+  +            +G  ++I + 
Sbjct: 4   KISIIGA-GNVGATLAHLLALKELGDVVLFD--IVEGVP-----------QGKALDIAEA 49

Query: 64  IFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
                 D  +   N       +++ ++    PRK  M R +LL IN+ I  +  + +   
Sbjct: 50  APVEGFDTKITGTNDYEDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML-RLDHNRAIAKLASKLNEPVSSI 181
           A  D  V+VV NPV+  TY+ +K            M   LD  R    +A +LN  V  +
Sbjct: 110 AP-DAIVIVVTNPVDAMTYVALK-ESGFPKNRVIGMAGVLDSARFRTFIAEELNVSVKDV 167

Query: 182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISI 237
              FV G H  SM P  RY+TV G+ + D+++          L  I  R    G EI+ +
Sbjct: 168 -TAFVLGGHGDSMVPLVRYSTVGGIPLEDLLSKEK-------LDEIVERTRKGGAEIVGL 219

Query: 238 RGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPKDIIFGFPVKI-KNS 292
               SA  A +A+I  + + I   +  V   +P     +G Y V KD+  G PVK+ KN 
Sbjct: 220 LKTGSAYYAPAASIAEMVEAILKDKKRV---LPCSAYLEGEYGV-KDVYVGVPVKLGKNG 275

Query: 293 KYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
             KII+ LE+D   +   + S+E +K  I ++ 
Sbjct: 276 VEKIIE-LELDDEEKAAFDKSVEAVKKLIEALK 307

Length = 307

>gnl|CDD|133430 cd05294, LDH-like_MDH_nadp, A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

 Score = 73.2 bits (180), Expect = 9e-15
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 14/315 (4%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++SI GA+G++G      +A        + ++ ++   S  KS + +KG+ ++I D + 
Sbjct: 1   MKVSIIGASGRVGSATALLLA-------KEDVVKEINLISRPKSLEKLKGLRLDIYDALA 53

Query: 66  PLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
              +D  +   + ++    ++I I+    PRK  M R +L   N+ I  +  K +   A 
Sbjct: 54  AAGIDAEIKISSDLSDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAP 113

Query: 125 RDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV 184
            D K+LVV NPV+  TY  +K +     + F     LD  R    +A   N  +S +   
Sbjct: 114 -DTKILVVTNPVDVMTYKALKESGFDKNRVFGLGTHLDSLRFKVAIAKHFNVHISEVHTR 172

Query: 185 FVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAA 244
            + G H  SM P     ++ G+ I+       F  + + +  +   G+ IIS++G S   
Sbjct: 173 II-GEHGDSMVPLISSTSIGGIPIKRFPEYKDFDVEKI-VETVKNAGQNIISLKGGSEYG 230

Query: 245 SAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEID 303
            A  +AI ++   I   E  + T+    +G  +  +D+  G PVK+  +  + I  +E+D
Sbjct: 231 PA--SAISNLVRTIANDERRILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPIEMD 288

Query: 304 KFSRKKINLSIEELK 318
              R+    S E +K
Sbjct: 289 DDEREAFRKSAEIVK 303

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)- binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 309

>gnl|CDD|133418 cd00300, LDH_like, L-lactate dehydrogenase-like enzymes

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 41/295 (13%)

Query: 8   ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL 67
           I+I GA G +G  + F +    L  +     L L++ + +K+    KG  +++      L
Sbjct: 1   ITIIGA-GNVGAAVAFALIAKGLASE-----LVLVDVNEEKA----KGDALDLSHASAFL 50

Query: 68  LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDV 127
                V         DA+I ++    PRK    R +L+  N+ I       L      D 
Sbjct: 51  ATGTIVRGGDYADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNL-KKYGPDA 109

Query: 128 KVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKLASKLN 175
            +LVV NPV+  TY+  K            +  L  NR I            + LA KL+
Sbjct: 110 IILVVSNPVDILTYVAQK------------LSGLPKNRVIGSGTLLDSARFRSLLAEKLD 157

Query: 176 EPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEII 235
               S+   +V G H  S    +  ATV G+ + ++        + +    +   G EII
Sbjct: 158 VDPQSV-HAYVLGEHGDSQVVAWSTATVGGLPLEELAPFTKLDLEAIE-EEVRTSGYEII 215

Query: 236 SIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPVKI 289
            ++GA++   A + A   I   I   E  V  +    +G Y + +D+    P  +
Sbjct: 216 RLKGATNYGIATAIA--DIVKSILLDERRVLPVSAVQEGQYGI-EDVALSVPAVV 267

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|233562 TIGR01763, MalateDH_bact, malate dehydrogenase, NAD-dependent

 Score = 65.7 bits (160), Expect = 3e-12
 Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 27/248 (10%)

Query: 83  DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVK------VLVVGNPV 136
           +++I ++    PRK  M R +LL++N+ I       +  V  R ++      ++VV NP+
Sbjct: 69  NSDIVVITAGLPRKPGMSREDLLSMNAGI-------VREVTGRIMEHSPNPIIVVVSNPL 121

Query: 137 NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYP 196
           +  TY+  + +     +       LD  R    +A +L   V  +    V G H  +M P
Sbjct: 122 DAMTYVAWQKSGFPKERVIGQAGVLDSARFRTFIAMELGVSVQDVT-ACVLGGHGDAMVP 180

Query: 197 DYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASSAASAASAAID 252
             RY+TV G+ + D+I+          +  I  R    G EI+++    SA  A +A++ 
Sbjct: 181 LVRYSTVAGIPVADLISAER-------IAEIVERTRKGGGEIVNLLKQGSAYYAPAASVV 233

Query: 253 HIKDWIFGTENWVTMGIPS-DGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKIN 311
            + + I      V       DG Y +   I  G PV +  +  + I  L++D+     +N
Sbjct: 234 EMVEAILKDRKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYELKLDQSELALLN 292

Query: 312 LSIEELKN 319
            S + +  
Sbjct: 293 KSAKIVDE 300

This enzyme converts malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterized , and have been used to set the cutoffs for this model. Sequences showing [aflimv][ap]R[rk]pgM[st] and [ltv][ilm]gGhgd were kept above trusted, while those in which the capitalized residues in the patterns were found to be Q, E and E were kept below the noise cutoff. Some sequences in the grey zone have been annotated as malate dehydrogenases, but none have been characterized. Phylogenetically, a clade of sequences from eukaryotes such as Toxoplasma and Plasmodium which include a characterized lactate dehydrogenase and show abiguous critical residue patterns appears to be more closely related to these bacterial sequences than other eukaryotic sequences. These are relatively long branch and have been excluded from the model. All other sequences falling below trusted appear to be phylogenetically outside of the clade including the trusted hits. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable [Energy metabolism, TCA cycle]. Length = 305

>gnl|CDD|173376 PTZ00082, PTZ00082, L-lactate dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 19/256 (7%)

Query: 76  NPITAFKDANIAILIGSF---PRKSNME--RSELLAINSSIFIEQGKALNSVASRDVKVL 130
           N       +++ I+       P KS+ E  R +LL +N+ I  E  + +      +  V+
Sbjct: 67  NNYEDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCP-NAFVI 125

Query: 131 VVGNPVNTNTYITMKSAPDLSYKNFTAMLR-LDHNRAIAKLASKLNEPVSSIKKVFVWGN 189
           V+ NP++    +  + +  L       M   LD +R    +A KL      +    V G 
Sbjct: 126 VITNPLDVMVKLLQEHS-GLPKNKVCGMAGVLDSSRLRTYIAEKLGVNPRDVHA-SVIGA 183

Query: 190 HSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASSAAS 245
           H   M P  RY TV G+ + + I       +   +  I  R    G+EI+ + G  SA  
Sbjct: 184 HGDKMVPLPRYVTVGGIPLSEFIKKGLITQEE--IDEIVERTRNTGKEIVDLLGTGSAYF 241

Query: 246 A-ASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEID 303
           A A+AAI+  + ++   +  +      +G Y   KDI  G P  I  N   KII+ L++ 
Sbjct: 242 APAAAAIEMAEAYLKDKKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIE-LDLT 299

Query: 304 KFSRKKINLSIEELKN 319
              +KK + SI+E+K 
Sbjct: 300 PEEQKKFDESIKEVKR 315

Length = 321

>gnl|CDD|233566 TIGR01771, L-LDH-NAD, L-lactate dehydrogenase

 Score = 58.7 bits (143), Expect = 7e-10
 Identities = 69/287 (24%), Positives = 106/287 (36%), Gaps = 37/287 (12%)

Query: 51  KAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSS 110
              +G  M+++     L     +     +  KDA++ ++    P+K    R EL+  N  
Sbjct: 32  DKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITAGAPQKPGETRLELVGRNVR 91

Query: 111 IFIEQGKALNSVASR-DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAK 169
           I   +      V S  D   LV  NPV+  TY+  K    LS            NR I  
Sbjct: 92  IM--KSIVPEVVKSGFDGIFLVATNPVDILTYVAWK----LS--------GFPKNRVIGS 137

Query: 170 ------------LASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSF 217
                       LA KL     S+   ++ G H  S  P +  AT+ GV + D       
Sbjct: 138 GTVLDTARLRYLLAEKLGVDPQSV-HAYIIGEHGDSEVPVWSSATIGGVPLLDY-LKAKG 195

Query: 218 WNKNVFLPAIS----RRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSD 272
              ++ L  I         EII+ +GA+      + A   I + I   EN V  +    D
Sbjct: 196 TETDLDLEEIEKEVRDAAYEIINRKGATYYGIGMAVA--RIVEAILHDENRVLPVSAYLD 253

Query: 273 GSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKN 319
           G Y + KD+  G P  +  +  + I  L +    ++    S E LK 
Sbjct: 254 GEYGI-KDVYIGVPAVLGRNGVEEIIELPLSDEEKEAFQKSAETLKK 299

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases [Energy metabolism, Anaerobic, Energy metabolism, Glycolysis/gluconeogenesis]. Length = 299

>gnl|CDD|133427 cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

 Score = 49.8 bits (120), Expect = 7e-07
 Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 48/274 (17%)

Query: 71  VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVK-- 128
           V +     +  KDA+I ++    P+K    R +LL  N+       K + S+  +     
Sbjct: 56  VKIKAGDYSDCKDADIVVITAGAPQKPGETRLDLLEKNA-------KIMKSIVPKIKASG 108

Query: 129 ----VLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIA------------KLAS 172
                LV  NPV+  TY+  K            +  L  NR I              LA 
Sbjct: 109 FDGIFLVASNPVDVITYVVQK------------LSGLPKNRVIGTGTSLDTARLRRALAE 156

Query: 173 KLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAIS---- 228
           KLN    S+   +V G H  S +  +   TV G  + D++         + L  I     
Sbjct: 157 KLNVDPRSV-HAYVLGEHGDSQFVAWSTVTVGGKPLLDLLKEGKL--SELDLDEIEEDVR 213

Query: 229 RRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPV 287
           + G EII+ +GA+    A + A   I   I   EN +  +    DG Y   KD+  G P 
Sbjct: 214 KAGYEIINGKGATYYGIATALA--RIVKAILNDENAILPVSAYLDGEYGE-KDVYIGVPA 270

Query: 288 KIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            I  +  + +  L++ +  ++K   S + +K  I
Sbjct: 271 IIGRNGVEEVIELDLTEEEQEKFEKSADIIKENI 304

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 306

>gnl|CDD|178836 PRK00066, ldh, L-lactate dehydrogenase; Reviewed

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 48/265 (18%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVK------VLVVGNP 135
           KDA++ ++    P+K    R +L+  N  IF        S+    +        LV  NP
Sbjct: 72  KDADLVVITAGAPQKPGETRLDLVEKNLKIF-------KSIVGEVMASGFDGIFLVASNP 124

Query: 136 VNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAK------------LASKLNEPVSSIKK 183
           V+  TY T K    LS             R I              L+ KL+    S+  
Sbjct: 125 VDILTYATWK----LS--------GFPKERVIGSGTSLDSARFRYMLSEKLDVDPRSV-H 171

Query: 184 VFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI----SRRGEEIISIRG 239
            ++ G H  + +P + +A V GV + + +  N  +++   L  I         EII  +G
Sbjct: 172 AYIIGEHGDTEFPVWSHANVAGVPLEEYLEENEQYDEE-DLDEIFENVRDAAYEIIEKKG 230

Query: 240 ASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQ 298
           A+    A + A   I   I   EN V  +    +G Y   +D+  G P  +  +  + I 
Sbjct: 231 ATYYGIAMALA--RITKAILNNENAVLPVSAYLEGQYGE-EDVYIGVPAVVNRNGIREIV 287

Query: 299 NLEIDKFSRKKINLSIEELKNEILS 323
            L ++   ++K   S + LK EI+ 
Sbjct: 288 ELPLNDDEKQKFAHSADVLK-EIMD 311

Length = 315

>gnl|CDD|130833 TIGR01772, MDH_euk_gproteo, malate dehydrogenase, NAD-dependent

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 62/274 (22%), Positives = 96/274 (35%), Gaps = 55/274 (20%)

Query: 75  ENPIT-AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133
           E  +  A K A++ ++    PRK  M R +L  +N+ I  +   A+     +   +LV+ 
Sbjct: 58  EEGLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPK-AMILVIT 116

Query: 134 NPVNTNTYI---TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190
           NPVN+   I    +K            +  LD  RA   +A    +       V V G H
Sbjct: 117 NPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELKGKD-PMEVNVPVIGGH 175

Query: 191 SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLP------AISRR----GEEIISIR-G 239
           S             G  I  +I+          L       A+  R    G E++  + G
Sbjct: 176 S-------------GETIIPLISQCPG----KVLFTEDQLEALIHRIQNAGTEVVKAKAG 218

Query: 240 ASSA----ASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDII-----FGFPVKIK 290
           A SA    A A +  +  +   + G E  V           V  D +     F  P+ + 
Sbjct: 219 AGSATLSMAFAGARFVLSLVRGLKGEEGVV-------ECAYVESDGVTEATFFATPLLLG 271

Query: 291 N---SKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
                K   I  L    F  K +N ++ ELK  I
Sbjct: 272 KNGVEKRLGIGKL--SSFEEKMLNGALPELKKNI 303

This model represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exidt in eukaryotes. In S. cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases [Energy metabolism, TCA cycle]. Length = 312

>gnl|CDD|235340 PRK05086, PRK05086, malate dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 15/125 (12%)

Query: 75  ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSI---FIEQGKALNSVASRDVKVLV 131
           E+P  A + A++ ++     RK  M+RS+L  +N+ I    +E+      VA    K  +
Sbjct: 61  EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEK------VAKTCPKACI 114

Query: 132 --VGNPVNTNTYI---TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFV 186
             + NPVNT   I    +K A          +  LD  R+   +A    +    + +V V
Sbjct: 115 GIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKGKQPGEV-EVPV 173

Query: 187 WGNHS 191
            G HS
Sbjct: 174 IGGHS 178

Length = 312

>gnl|CDD|133422 cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysomal and mitochondrial malate dehydrogenases

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 80  AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138
           A K A++ ++    PRK  M R +L  IN+ I  +   A+ + A     +L++ NPVN+
Sbjct: 65  ALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAV-AKACPKALILIISNPVNS 122

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 310

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
PRK05442	326	malate dehydrogenase; Provisional	100.0
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	100.0
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	100.0
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	100.0
PLN00112	444	malate dehydrogenase (NADP); Provisional	100.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	100.0
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	100.0
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	100.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	100.0
PLN02602	350	lactate dehydrogenase	100.0
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	100.0
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	100.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	100.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	100.0
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	100.0
KOG1495|consensus	332		100.0
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	100.0
PLN00135	309	malate dehydrogenase	100.0
TIGR01756	313	LDH_protist lactate dehydrogenase. This model repr	100.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	100.0
PTZ00117	319	malate dehydrogenase; Provisional	100.0
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	100.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	100.0
PTZ00082	321	L-lactate dehydrogenase; Provisional	100.0
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	100.0
KOG1496|consensus	332		100.0
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	100.0
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	100.0
PRK06223	307	malate dehydrogenase; Reviewed	100.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	100.0
PTZ00325	321	malate dehydrogenase; Provisional	100.0
PRK05086	312	malate dehydrogenase; Provisional	100.0
PLN00106	323	malate dehydrogenase	100.0
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	100.0
KOG1494|consensus	345		100.0
PF02866	174	Ldh_1_C: lactate/malate dehydrogenase, alpha/beta	100.0
cd05197	425	GH4_glycoside_hydrolases Glycoside Hydrases Family	100.0
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	100.0
PRK15076	431	alpha-galactosidase; Provisional	100.0
cd05296	419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	100.0
cd05298	437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	99.97
cd05297	423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	99.97
COG1486	442	CelF Alpha-galactosidases/6-phospho-beta-glucosida	99.96
PF02056	183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	99.83
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	99.09
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.0
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.94
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	98.88
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	98.88
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.86
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	98.85
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.83
KOG2304|consensus	298		98.81
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.77
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.73
PRK11730	715	fadB multifunctional fatty acid oxidation complex	98.71
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.69
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	98.69
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	98.69
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.68
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	98.66
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	98.66
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	98.6
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	98.6
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.59
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	98.58
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	98.56
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.54
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	98.53
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.48
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	98.42
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	98.42
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	98.4
KOG1502|consensus	327		98.37
PLN02353	473	probable UDP-glucose 6-dehydrogenase	98.36
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	98.33
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.31
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.31
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	98.3
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.29
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.27
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	98.26
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	98.26
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	98.25
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	98.25
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	98.25
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	98.2
KOG2711|consensus	372		98.16
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	98.16
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.14
PLN02206	442	UDP-glucuronate decarboxylase	98.12
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	98.12
PLN02650	351	dihydroflavonol-4-reductase	98.11
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.09
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	98.07
PLN03209	576	translocon at the inner envelope of chloroplast su	98.06
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	98.06
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	98.06
PLN02427	386	UDP-apiose/xylose synthase	98.05
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.04
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.03
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	98.03
PRK07680	273	late competence protein ComER; Validated	98.02
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	97.97
PRK08655	437	prephenate dehydrogenase; Provisional	97.94
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	97.94
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	97.92
CHL00194	317	ycf39 Ycf39; Provisional	97.91
PLN02214	342	cinnamoyl-CoA reductase	97.9
PLN00198	338	anthocyanidin reductase; Provisional	97.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	97.89
PRK07417	279	arogenate dehydrogenase; Reviewed	97.88
PLN02778	298	3,5-epimerase/4-reductase	97.86
PLN02240	352	UDP-glucose 4-epimerase	97.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.86
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.86
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	97.85
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.85
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.84
PF11975	232	Glyco_hydro_4C: Family 4 glycosyl hydrolase C-term	97.83
PLN02688	266	pyrroline-5-carboxylate reductase	97.81
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.8
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	97.8
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.79
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.78
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	97.76
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	97.76
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.76
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	97.76
PLN02583	297	cinnamoyl-CoA reductase	97.75
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.75
PLN02572	442	UDP-sulfoquinovose synthase	97.74
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.71
PRK12939	250	short chain dehydrogenase; Provisional	97.7
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	97.7
PRK06180	277	short chain dehydrogenase; Provisional	97.69
KOG1430|consensus	361		97.66
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.66
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.65
PLN02896	353	cinnamyl-alcohol dehydrogenase	97.65
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.64
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	97.64
PRK07326	237	short chain dehydrogenase; Provisional	97.64
PRK06194	287	hypothetical protein; Provisional	97.63
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	97.62
PRK12937	245	short chain dehydrogenase; Provisional	97.61
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.61
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.61
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.6
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	97.6
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.6
COG2910	211	Putative NADH-flavin reductase [General function p	97.59
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	97.59
PRK07067	257	sorbitol dehydrogenase; Provisional	97.59
KOG1429|consensus	350		97.58
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.57
PRK05717	255	oxidoreductase; Validated	97.57
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.57
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.56
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	97.56
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.55
PRK08265	261	short chain dehydrogenase; Provisional	97.54
PRK12480	330	D-lactate dehydrogenase; Provisional	97.53
PRK07806	248	short chain dehydrogenase; Provisional	97.53
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.52
PRK07478	254	short chain dehydrogenase; Provisional	97.52
PLN02653	340	GDP-mannose 4,6-dehydratase	97.51
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	97.5
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	97.5
PRK10538	248	malonic semialdehyde reductase; Provisional	97.5
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.5
PTZ00431	260	pyrroline carboxylate reductase; Provisional	97.49
PRK06545	359	prephenate dehydrogenase; Validated	97.48
PRK09135	249	pteridine reductase; Provisional	97.47
PRK06172	253	short chain dehydrogenase; Provisional	97.47
PRK07774	250	short chain dehydrogenase; Provisional	97.46
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	97.46
KOG2666|consensus	481		97.45
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.45
PRK05993	277	short chain dehydrogenase; Provisional	97.45
PRK12828	239	short chain dehydrogenase; Provisional	97.43
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.42
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	97.42
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.42
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.41
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.41
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	97.39
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	97.39
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	97.39
PRK06139	330	short chain dehydrogenase; Provisional	97.38
PRK07576	264	short chain dehydrogenase; Provisional	97.38
PRK05866	293	short chain dehydrogenase; Provisional	97.38
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	97.38
PRK06179	270	short chain dehydrogenase; Provisional	97.37
PRK08267	260	short chain dehydrogenase; Provisional	97.37
PRK08263	275	short chain dehydrogenase; Provisional	97.37
PLN02686	367	cinnamoyl-CoA reductase	97.36
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.36
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	97.36
PRK06500	249	short chain dehydrogenase; Provisional	97.35
PLN02256	304	arogenate dehydrogenase	97.35
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.33
PRK05479	330	ketol-acid reductoisomerase; Provisional	97.33
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.33
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.33
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.33
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	97.32
PRK07063	260	short chain dehydrogenase; Provisional	97.32
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.32
PRK05865	854	hypothetical protein; Provisional	97.31
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.31
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.31
PRK14982	340	acyl-ACP reductase; Provisional	97.31
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.29
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.29
PRK12746	254	short chain dehydrogenase; Provisional	97.29
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.28
PRK07890	258	short chain dehydrogenase; Provisional	97.27
PRK06196	315	oxidoreductase; Provisional	97.27
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.27
PRK05884	223	short chain dehydrogenase; Provisional	97.26
PRK08643	256	acetoin reductase; Validated	97.26
PRK08507	275	prephenate dehydrogenase; Validated	97.26
PRK07814	263	short chain dehydrogenase; Provisional	97.26
PRK09072	263	short chain dehydrogenase; Provisional	97.25
KOG2305|consensus	313		97.25
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	97.24
PLN02260	668	probable rhamnose biosynthetic enzyme	97.24
PRK08219	227	short chain dehydrogenase; Provisional	97.24
PRK06128	300	oxidoreductase; Provisional	97.23
PRK07102	243	short chain dehydrogenase; Provisional	97.22
PRK07201	657	short chain dehydrogenase; Provisional	97.2
PRK08278	273	short chain dehydrogenase; Provisional	97.2
PRK07825	273	short chain dehydrogenase; Provisional	97.2
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.19
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.19
PRK08339	263	short chain dehydrogenase; Provisional	97.19
PRK05875	276	short chain dehydrogenase; Provisional	97.19
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.19
PLN02253	280	xanthoxin dehydrogenase	97.18
PRK05876	275	short chain dehydrogenase; Provisional	97.17
PRK09134	258	short chain dehydrogenase; Provisional	97.16
PRK07454	241	short chain dehydrogenase; Provisional	97.16
PRK07024	257	short chain dehydrogenase; Provisional	97.16
PRK09186	256	flagellin modification protein A; Provisional	97.16
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.15
PRK06398	258	aldose dehydrogenase; Validated	97.15
PRK12829	264	short chain dehydrogenase; Provisional	97.14
PRK12747	252	short chain dehydrogenase; Provisional	97.14
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.13
PRK06182	273	short chain dehydrogenase; Validated	97.13
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.13
PRK07109	334	short chain dehydrogenase; Provisional	97.13
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.12
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.12
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	97.12
PRK06482	276	short chain dehydrogenase; Provisional	97.11
PRK06101	240	short chain dehydrogenase; Provisional	97.11
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.11
PRK12320	699	hypothetical protein; Provisional	97.1
PLN02780	320	ketoreductase/ oxidoreductase	97.1
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.1
PRK07856	252	short chain dehydrogenase; Provisional	97.09
PRK12827	249	short chain dehydrogenase; Provisional	97.09
PRK05650	270	short chain dehydrogenase; Provisional	97.09
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.09
PRK09291	257	short chain dehydrogenase; Provisional	97.08
PRK06914	280	short chain dehydrogenase; Provisional	97.07
PRK08628	258	short chain dehydrogenase; Provisional	97.07
KOG1205|consensus	282		97.07
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	97.07
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.07
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	97.06
KOG1201|consensus	300		97.06
PRK05867	253	short chain dehydrogenase; Provisional	97.06
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.04
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	97.02
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	97.02
PRK06197	306	short chain dehydrogenase; Provisional	97.02
PRK07069	251	short chain dehydrogenase; Validated	97.02
PRK07832	272	short chain dehydrogenase; Provisional	97.02
PRK07062	265	short chain dehydrogenase; Provisional	97.01
PLN02712	667	arogenate dehydrogenase	97.01
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.01
PRK12367	245	short chain dehydrogenase; Provisional	97.0
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.0
PRK15059	292	tartronate semialdehyde reductase; Provisional	97.0
PRK07035	252	short chain dehydrogenase; Provisional	96.99
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.98
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.98
PRK06138	252	short chain dehydrogenase; Provisional	96.98
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.98
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.98
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	96.97
PRK12744	257	short chain dehydrogenase; Provisional	96.97
PRK06057	255	short chain dehydrogenase; Provisional	96.97
PRK12742	237	oxidoreductase; Provisional	96.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.96
PRK06181	263	short chain dehydrogenase; Provisional	96.95
PRK06701	290	short chain dehydrogenase; Provisional	96.95
PRK08264	238	short chain dehydrogenase; Validated	96.94
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.94
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.93
PRK07060	245	short chain dehydrogenase; Provisional	96.92
PRK06125	259	short chain dehydrogenase; Provisional	96.92
PRK08291	330	ectoine utilization protein EutC; Validated	96.92
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.91
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.9
PRK09242	257	tropinone reductase; Provisional	96.9
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.88
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.88
PRK07074	257	short chain dehydrogenase; Provisional	96.87
PRK08605	332	D-lactate dehydrogenase; Validated	96.87
PRK07904	253	short chain dehydrogenase; Provisional	96.86
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.86
PRK06198	260	short chain dehydrogenase; Provisional	96.86
PRK13243	333	glyoxylate reductase; Reviewed	96.85
PRK05872	296	short chain dehydrogenase; Provisional	96.84
PRK08251	248	short chain dehydrogenase; Provisional	96.84
PRK06841	255	short chain dehydrogenase; Provisional	96.83
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	96.83
PRK06114	254	short chain dehydrogenase; Provisional	96.81
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	96.81
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.8
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.79
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	96.79
PRK08862	227	short chain dehydrogenase; Provisional	96.79
PRK07985	294	oxidoreductase; Provisional	96.78
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.78
PRK08226	263	short chain dehydrogenase; Provisional	96.77
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.77
PRK06407	301	ornithine cyclodeaminase; Provisional	96.77
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.77
PRK12557	342	H(2)-dependent methylenetetrahydromethanopterin de	96.76
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.74
PRK06141	314	ornithine cyclodeaminase; Validated	96.74
PRK08703	239	short chain dehydrogenase; Provisional	96.73
PLN02712	667	arogenate dehydrogenase	96.72
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.71
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.71
PRK07574	385	formate dehydrogenase; Provisional	96.7
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.69
PRK06949	258	short chain dehydrogenase; Provisional	96.69
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.69
PRK08618	325	ornithine cyclodeaminase; Validated	96.69
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.68
PRK08324	681	short chain dehydrogenase; Validated	96.68
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.68
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.67
PRK06523	260	short chain dehydrogenase; Provisional	96.66
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	96.65
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.64
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.64
PRK07578	199	short chain dehydrogenase; Provisional	96.64
PRK06924	251	short chain dehydrogenase; Provisional	96.64
PRK06484	520	short chain dehydrogenase; Validated	96.63
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	96.63
PRK07340	304	ornithine cyclodeaminase; Validated	96.63
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.63
PRK06940	275	short chain dehydrogenase; Provisional	96.63
PRK07677	252	short chain dehydrogenase; Provisional	96.62
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.61
PRK08177	225	short chain dehydrogenase; Provisional	96.61
PRK05693	274	short chain dehydrogenase; Provisional	96.59
PRK08818	370	prephenate dehydrogenase; Provisional	96.58
PRK06823	315	ornithine cyclodeaminase; Validated	96.57
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.56
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.56
PRK05855	582	short chain dehydrogenase; Validated	96.54
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.53
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.52
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.52
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	96.52
PRK07791	286	short chain dehydrogenase; Provisional	96.51
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.5
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.5
PLN03139	386	formate dehydrogenase; Provisional	96.49
PLN02260	668	probable rhamnose biosynthetic enzyme	96.48
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	96.48
PRK07589	346	ornithine cyclodeaminase; Validated	96.45
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.43
PLN02858	1378	fructose-bisphosphate aldolase	96.43
TIGR01746	367	Thioester-redct thioester reductase domain. It has	96.42
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.41
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.41
PRK06199	379	ornithine cyclodeaminase; Validated	96.39
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.39
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.38
PLN03129	581	NADP-dependent malic enzyme; Provisional	96.38
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.37
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.35
PRK05854	313	short chain dehydrogenase; Provisional	96.34
KOG0409|consensus	327		96.34
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.32
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PRK07775	274	short chain dehydrogenase; Provisional	96.29
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.28
PRK08589	272	short chain dehydrogenase; Validated	96.28
PRK06484	520	short chain dehydrogenase; Validated	96.28
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.28
PRK07577	234	short chain dehydrogenase; Provisional	96.28
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.27
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.27
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.27
PRK07201	657	short chain dehydrogenase; Provisional	96.26
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.26
PRK06953	222	short chain dehydrogenase; Provisional	96.26
PLN02494	477	adenosylhomocysteinase	96.25
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.25
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	96.25
PRK12743	256	oxidoreductase; Provisional	96.25
PLN02928	347	oxidoreductase family protein	96.24
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.24
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.23
PRK07831	262	short chain dehydrogenase; Provisional	96.22
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.22
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.22
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.21
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.21
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.2
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.2
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.13
PRK06720	169	hypothetical protein; Provisional	96.13
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.13
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.11
PTZ00317	559	NADP-dependent malic enzyme; Provisional	96.1
PLN00203	519	glutamyl-tRNA reductase	96.1
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.09
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.08
PLN02996	491	fatty acyl-CoA reductase	96.07
PLN00016	378	RNA-binding protein; Provisional	96.07
PF00185	158	OTCace: Aspartate/ornithine carbamoyltransferase,	96.07
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.07
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.06
PRK06436	303	glycerate dehydrogenase; Provisional	96.06
PRK06123	248	short chain dehydrogenase; Provisional	96.05
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	96.04
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.04
PRK09009	235	C factor cell-cell signaling protein; Provisional	96.04
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.03
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.03
PRK08303	305	short chain dehydrogenase; Provisional	96.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.01
PRK06046	326	alanine dehydrogenase; Validated	96.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.97
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.97
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.95
PLN02858	1378	fructose-bisphosphate aldolase	95.94
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.94
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.91
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	95.89
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.89
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.89
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.87
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.85
PLN02306	386	hydroxypyruvate reductase	95.83
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.83
PRK13529	563	malate dehydrogenase; Provisional	95.82
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.81
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	95.81
PRK06483	236	dihydromonapterin reductase; Provisional	95.8
KOG1371|consensus	343		95.8
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.79
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.78
PRK05599	246	hypothetical protein; Provisional	95.78
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.77
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.76
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.75
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.75
PLN02383	344	aspartate semialdehyde dehydrogenase	95.74
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.73
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	95.71
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.71
PRK09496	453	trkA potassium transporter peripheral membrane com	95.7
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	95.67
PRK07041	230	short chain dehydrogenase; Provisional	95.65
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.64
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	95.6
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.58
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.57
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.56
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.55
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.55
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.53
PRK08017	256	oxidoreductase; Provisional	95.52
KOG1200|consensus	256		95.49
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.48
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.48
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.47
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.46
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.46
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.45
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.43
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.41
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.4
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.4
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.38
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.37
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.37

>PRK05442 malate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-73  Score=527.21  Aligned_cols=323  Identities=57%  Similarity=0.960  Sum_probs=297.8

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+||||+|+||+++|+.|+..+++++++|.||+|+|++  +++++++|.++|++|+..++..+++++++.|+++
T Consensus         1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~--~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~   78 (326)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIP--PALKALEGVVMELDDCAFPLLAGVVITDDPNVAF   78 (326)
T ss_pred             CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecC--CcccccceeehhhhhhhhhhcCCcEEecChHHHh
Confidence            78899999999889999999999999999987677899999997  2256789999999998756555667888889999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      +|||+||+++|.|+++|++|.+++..|++++++++++|+++++|++++|++|||+|+||+++++++|+||++||+|.|.|
T Consensus        79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~L  158 (326)
T PRK05442         79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRL  158 (326)
T ss_pred             CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHH
Confidence            99999999999999999999999999999999999999998768999999999999999999999999999998777999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS  241 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~  241 (329)
                      ||+||++++|++++++|++|++++||||||+++||+||+++++|+|+.+++.++ .|..+++.+++++++++|++.||++
T Consensus       159 Ds~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v~g~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kG~t  237 (326)
T PRK05442        159 DHNRALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATIDGKPAAEVINDQ-AWLEDTFIPTVQKRGAAIIEARGAS  237 (326)
T ss_pred             HHHHHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEECCEEHHHHccch-hhHHHHHHHHHHhhHHHHHhCcCCc
Confidence            999999999999999999999987899999999999999999999999988654 5667899999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      +|++++++++ .+++++++|  + +++|||++++|+||+|+|+|||+||++.+|+++++.+++|+++|+++|++|++.|+
T Consensus       238 ~~~~a~~~~~-~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~~l~L~~~E~~~l~~s~~~l~  316 (326)
T PRK05442        238 SAASAANAAI-DHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGLEIDDFSREKIDATLAELE  316 (326)
T ss_pred             cHHHHHHHHH-HHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            9988876434 788887777  7 99999999999999999999999999999999996669999999999999999999


Q ss_pred             HHHHHHHhhh
Q psy9582         319 NEILSISHLI  328 (329)
Q Consensus       319 ~~~~~~~~~~  328 (329)
                      ++.+.+.++|
T Consensus       317 ~~~~~~~~~~  326 (326)
T PRK05442        317 EERDAVKHLL  326 (326)
T ss_pred             HHHHHHHhhC
Confidence            9999998875

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=100.00  E-value=9.7e-72  Score=516.18  Aligned_cols=316  Identities=52%  Similarity=0.884  Sum_probs=289.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +++.||+||||+|+||+++++.|+..++++.++++||+|+|++  ++.++++|.++|++|...+...+++++.+.|++++
T Consensus         1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~--~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~   78 (323)
T TIGR01759         1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIP--PAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFK   78 (323)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecC--CcccccchHHHHHhhccccccCCcEEecChHHHhC
Confidence            4689999999889999999999999999876667799999997  22466899999999987555556677778899999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCC-CeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR-DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p-~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      |||+||++||.|+++|++|.+++..|++++++++++|++++ | ++++|++|||+|+||+++++++++||++||+|+|.|
T Consensus        79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~-~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~L  157 (323)
T TIGR01759        79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA-KKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRL  157 (323)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHH
Confidence            99999999999999999999999999999999999999998 6 999999999999999999999989999998778999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS  241 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~  241 (329)
                      ||+||++++|++++++|++|+.++||||||++++|+||+++++|+|+.+++.++ .|+.+++.+++++++++|++.||++
T Consensus       158 Ds~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~g~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kG~t  236 (323)
T TIGR01759       158 DHNRAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATVDGRPVKEVIKDD-KWLEGEFIPTVQQRGAAVIEARGAS  236 (323)
T ss_pred             HHHHHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEECCccHHHHhcch-hhHHHHHHHHHHhhHHHHHhccCCc
Confidence            999999999999999999998777999999999999999999999999987654 4667899999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCC-CCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDG-SYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      +|+++|++++ ++++++++|  + +++|||++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|++.
T Consensus       237 ~~~~~a~a~~-~iv~ail~~~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l~~sa~~  315 (323)
T TIGR01759       237 SAASAANAAI-DHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKLDATEDE  315 (323)
T ss_pred             chHHHHHHHH-HHHHHHHcCCCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHH
Confidence            9976665544 788888877  3 89999999999 9999999999999999 999999998799999999999999999


Q ss_pred             HHHHHHH
Q psy9582         317 LKNEILS  323 (329)
Q Consensus       317 i~~~~~~  323 (329)
                      |+++++.
T Consensus       316 lk~~~~~  322 (323)
T TIGR01759       316 LLEEKEE  322 (323)
T ss_pred             HHHHHhc
Confidence            9999865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=1.8e-71  Score=504.69  Aligned_cols=305  Identities=29%  Similarity=0.451  Sum_probs=280.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a   84 (329)
                      +||+|||| |+||+++|+.|+..++..     |++|+|++    +++++|.++||.|..........++. +.+++++||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~-----el~LiDi~----~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~a   70 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGS-----ELVLIDIN----EEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGA   70 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccc-----eEEEEEcc----cccccchhcchhhcchhccCceEEecCCChhhhcCC
Confidence            58999999 999999999998777765     99999999    88899999999998755444566655 558999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds  163 (329)
                      |+|+++||.||||||+|.|++..|+.+++++++++.++| ||++++++|||+|+|||++++.+ ++|++| |+++|.|||
T Consensus        71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~ty~~~k~s-g~p~~rvig~gt~LDs  148 (313)
T COG0039          71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILTYIAMKFS-GFPKNRVIGSGTVLDS  148 (313)
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHHHHHHHhc-CCCccceecccchHHH
Confidence            999999999999999999999999999999999999998 99999999999999999999999 899999 677899999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhc-cCccchhhhHHHHHhhhhHHHHHhcCC-c
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN-NNSFWNKNVFLPAISRRGEEIISIRGA-S  241 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~-~~~~~~~~~l~~~v~~~~~~i~~~kg~-~  241 (329)
                      +||++++|++++++|++|+++ |+|+||+++||+||+++++|+|+.++++ .+ .|..+++.+++++++++|++.||+ +
T Consensus       149 aR~~~~lae~~~v~~~~V~~~-ViGeHGdt~vp~~S~a~v~G~pl~~~~~~~~-~~~~~~i~~~v~~~g~eII~~kG~~t  226 (313)
T COG0039         149 ARFRTFLAEKLGVSPKDVHAY-VIGEHGDTMVPLWSQATVGGKPLEELLKEDT-EEDLEELIERVRNAGAEIIEAKGAGT  226 (313)
T ss_pred             HHHHHHHHHHhCCChhHceee-EeccCCCceEEeeeeeeECCEEHHHHhhccc-HhHHHHHHHHHHhhHHHHHHccCccc
Confidence            999999999999999999988 7889999999999999999999999997 34 578899999999999999999987 4


Q ss_pred             cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN  319 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  319 (329)
                      .|++++  ++.++.++|+.|+ +|+|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.+|+
T Consensus       227 ~~~~A~--a~a~~~~ail~d~~~vl~~s~~l~G~yg~-~dv~~gvP~~lg~~Gv~~iie-~~l~~~E~~~l~~s~~~lk~  302 (313)
T COG0039         227 YYGPAA--ALARMVEAILRDEKRVLPVSVYLDGEYGV-EDVYFGVPAVLGKNGVEEILE-LLLSDDEQEKLDKSAEELKK  302 (313)
T ss_pred             hhhHHH--HHHHHHHHHHcCCCceEEEEEeecCccCc-CCeEEEeeEEEcCCCcEEEec-CCCCHHHHHHHHHHHHHHHH
Confidence            444443  3558999999998 999999999999995 89999999999 999999999 99999999999999999999


Q ss_pred             HHHHHHhhh
Q psy9582         320 EILSISHLI  328 (329)
Q Consensus       320 ~~~~~~~~~  328 (329)
                      .++.+.+++
T Consensus       303 ~i~~~~~~~  311 (313)
T COG0039         303 NIELVKELV  311 (313)
T ss_pred             HHHHHHHhh
Confidence            999998874

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=100.00  E-value=3.7e-70  Score=512.66  Aligned_cols=317  Identities=41%  Similarity=0.722  Sum_probs=288.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE--ecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL--EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~--D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      ++.||+||||+|+||+++|+.|+.+++++.+++++|+|+  |++    +++++|.++||+|+.+++..+++++++.++++
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~----~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~  118 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERS----KEALEGVAMELEDSLYPLLREVSIGIDPYEVF  118 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCcc----chhhhHHHHHHHHhhhhhcCceEEecCCHHHh
Confidence            478999999999999999999999999987777888899  555    88899999999998766656677778889999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEech
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLR  160 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~  160 (329)
                      +|||+||+++|.|++||++|.+++..|+++++++++.|+++++|++++|++|||+|+||+++++.+ +++|+| |+++|.
T Consensus       119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~s-g~~~~rviG~gT~  197 (387)
T TIGR01757       119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKNA-PNIPRKNFHALTR  197 (387)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHHc-CCCcccEEEecch
Confidence            999999999999999999999999999999999999999987799999999999999999999999 777777 678899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCC
Q psy9582         161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA  240 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~  240 (329)
                      |||+|+++++|++++++|++|+..+||||||++|||+||+++|+|+|+.+++.+. .|..+++.+++++++++|++.||+
T Consensus       198 LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V~G~pl~~~~~~~-~~~~~ei~~~v~~~g~eIi~~KG~  276 (387)
T TIGR01757       198 LDENRAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKIGGRPAKEVIKDT-KWLEEEFTPTVQKRGGALIKKWGR  276 (387)
T ss_pred             hHHHHHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEECCEEhHHhcccc-cchHHHHHHHHHHHHHHHHhccCc
Confidence            9999999999999999999997555999999999999999999999999988664 577889999999999999999998


Q ss_pred             ccHHHHHHHHHHHHHHHHh--CCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEec-cCCCCCHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIF--GTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKII-QNLEIDKFSRKKINLSI  314 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~--~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~-~~~~l~~~E~~~l~~s~  314 (329)
                      ++|++.+++++ +++.+|.  +|+ +++|+|++++|+ ||+|+|+|||+||++ ++|+++++ + ++|+++|+++|++|+
T Consensus       277 t~~~s~a~ai~-~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~-l~L~~~E~~~l~~Sa  354 (387)
T TIGR01757       277 SSAASTAVSIA-DAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATD-VSMDDFLRERIRKSE  354 (387)
T ss_pred             hhHHHHHHHHH-HHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCC-CCCCHHHHHHHHHHH
Confidence            88855555555 5666666  677 999999999996 999899999999999 99999997 7 999999999999999


Q ss_pred             HHHHHHHHHHHhhh
Q psy9582         315 EELKNEILSISHLI  328 (329)
Q Consensus       315 ~~i~~~~~~~~~~~  328 (329)
                      ++|+++.+.+.+++
T Consensus       355 ~~L~~e~~~~~~~~  368 (387)
T TIGR01757       355 DELLKEKECVAHLI  368 (387)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999887754

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=100.00  E-value=5.1e-70  Score=518.59  Aligned_cols=318  Identities=41%  Similarity=0.704  Sum_probs=290.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCc--eEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPI--ILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~--ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      ++.||+||||+|+||+++++.|+.+++++.++++  ||+|+|++    +++++|.++||+|...++..++.++++.|+++
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~----~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~  174 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERS----KQALEGVAMELEDSLYPLLREVSIGIDPYEVF  174 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCC----cchhHHHHHHHHHhhhhhcCceEEecCCHHHh
Confidence            4689999999999999999999999888877754  99999999    88999999999998766666788788889999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEech
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLR  160 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~  160 (329)
                      +|||+||+++|.|+++|++|.+++..|++++++++++|+++++|+++||++|||+|+||+++++.+ +++++| |+.+|.
T Consensus       175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~s-g~~~~rViGtgT~  253 (444)
T PLN00112        175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNA-PNIPAKNFHALTR  253 (444)
T ss_pred             CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHc-CCCCcceEEeecc
Confidence            999999999999999999999999999999999999999953599999999999999999999999 666666 788899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCC
Q psy9582         161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA  240 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~  240 (329)
                      |||+||++++|++++++|++|++.+||||||++|||+||+++|+|+|+.+++.+. .|+.+++.+++++++++|++.||+
T Consensus       254 LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V~G~pl~e~i~~~-~~~~~ei~~~v~~~g~~Ii~~kG~  332 (444)
T PLN00112        254 LDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKINGLPVKEVITDH-KWLEEEFTPKVQKRGGVLIKKWGR  332 (444)
T ss_pred             HHHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEECCccHHHhhccc-cchHHHHHHHHHHHHHHHHhccCc
Confidence            9999999999999999999998766999999999999999999999999998765 677899999999999999999998


Q ss_pred             ccHHHHHHHHHHHHHHHHh--CCC-cEEEEEeecCC-CCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIF--GTE-NWVTMGIPSDG-SYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~--~~~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ++|++.+.+++ +++.+|+  .|+ +|+|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|++
T Consensus       333 t~~~s~a~ai~-~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el~L~~~E~~~l~~Sa~  411 (444)
T PLN00112        333 SSAASTAVSIA-DAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDVEIDDYLRERIKKSEA  411 (444)
T ss_pred             hhHHHHHHHHH-HHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCCCCCHHHHHHHHHHHH
Confidence            88855555444 6677776  677 99999999999 5999899999999999 99999999339999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy9582         316 ELKNEILSISHLI  328 (329)
Q Consensus       316 ~i~~~~~~~~~~~  328 (329)
                      +|+++.+.+.+++
T Consensus       412 ~L~~e~~~~~~~~  424 (444)
T PLN00112        412 ELLAEKRCVAHLT  424 (444)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988875

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=100.00  E-value=6e-69  Score=498.23  Aligned_cols=317  Identities=52%  Similarity=0.874  Sum_probs=290.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +++||+||||+|+||+++++.|+..++++.++++||+|+|++  ++.++++|+++|++|...++..+++++++.+++++|
T Consensus         1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~--~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~d   78 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELP--QALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKD   78 (322)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecC--CcccccceeehhhhhccccccCceEEecCcHHHhCC
Confidence            478999999889999999999999999987677899999997  225668999999999876655567787888999999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDH  163 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds  163 (329)
                      ||+||+++|.|+++|++|.+++..|++++++++++|+++++|++++|++|||+|+||+++++.++++|++|++|.|.||+
T Consensus        79 aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs  158 (322)
T cd01338          79 ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDH  158 (322)
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHH
Confidence            99999999999999999999999999999999999999974599999999999999999999996699999888899999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccH
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSA  243 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~  243 (329)
                      +|+++.+|+++|+++++|++++|||+||++++|+||+++++|+|+.+++.+. .|..+++.+++++++++|++.||+++|
T Consensus       159 ~Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v~g~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kG~t~~  237 (322)
T cd01338         159 NRAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATIGGKPAAEVINDR-AWLEDEFIPTVQKRGAAIIKARGASSA  237 (322)
T ss_pred             HHHHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEECCEeHHHhcChH-hhHHHHHHHHHHhhHHHHHhCcCCccH
Confidence            9999999999999999999977899999999999999999999999887654 566789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC---cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582         244 ASAASAAIDHIKDWIFGTE---NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN  319 (329)
Q Consensus       244 ~~~a~~~~~~l~~~i~~~~---~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  319 (329)
                      ++++++++ .+++++++|+   +++|+|++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus       238 ~~~a~a~~-~iv~ail~~~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~l~~  315 (322)
T cd01338         238 ASAANAAI-DHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEG-LEIDDFAREKIDATLAELLE  315 (322)
T ss_pred             HHHHHHHH-HHHHHHhcCCCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeC-CCCCHHHHHHHHHHHHHHHH
Confidence            88864444 7888888774   899999999999999999999999999 999999998 99999999999999999999


Q ss_pred             HHHHHH
Q psy9582         320 EILSIS  325 (329)
Q Consensus       320 ~~~~~~  325 (329)
                      +.+.+.
T Consensus       316 ~~~~~~  321 (322)
T cd01338         316 EREAVK  321 (322)
T ss_pred             HHHHhh
Confidence            998764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=2e-68  Score=491.73  Aligned_cols=297  Identities=16%  Similarity=0.309  Sum_probs=272.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCCc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKDA   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~a   84 (329)
                      ||+|||| |+||+++|+.|+..++++     ||+|+|++    +++++|.++||+|.. ++.  .+++++.+.|++++||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~-----elvL~Di~----~~~a~g~a~DL~~~~-~~~~~~~~~i~~~~y~~~~~a   69 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFS-----EIVLIDVN----EGVAEGEALDFHHAT-ALTYSTNTKIRAGDYDDCADA   69 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----cchhhHHHHHHHhhh-ccCCCCCEEEEECCHHHhCCC
Confidence            7999999 999999999999999988     99999999    788999999999975 332  2566666779999999


Q ss_pred             cEEEEeCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechh
Q psy9582          85 NIAILIGSFPRKSNME--RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRL  161 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~--~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l  161 (329)
                      |+||+++|.|++||++  |.+++..|+++++++++++.+++ |++++|++|||+|+||+++++.+ ++|++|+ +.||.|
T Consensus        70 DivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~~~~k~s-g~p~~rviG~gt~L  147 (307)
T cd05290          70 DIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVYIAATEF-DYPANKVIGTGTML  147 (307)
T ss_pred             CEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHHHHHHHh-CcChhheecccchH
Confidence            9999999999999999  69999999999999999999998 99999999999999999999999 9999995 566999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhcc--CccchhhhHHHHHhhhhHHHHHhcC
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINN--NSFWNKNVFLPAISRRGEEIISIRG  239 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~--~~~~~~~~l~~~v~~~~~~i~~~kg  239 (329)
                      ||+||++++|++++++|++|+++ ||||||++++|+||+++++|+|+.++++.  ...+..+++.+++++++++|++.||
T Consensus       148 Ds~R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~KG  226 (307)
T cd05290         148 DTARLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRKG  226 (307)
T ss_pred             HHHHHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHccC
Confidence            99999999999999999999998 89999999999999999999999988742  1134568899999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582         240 ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL  317 (329)
Q Consensus       240 ~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  317 (329)
                      +|+|+++.  ++.+++++|++|+ +++|+|++++|+|| ++|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus       227 ~t~~~ia~--a~~~ii~ail~d~~~v~~vsv~~~G~yg-~~~v~~svP~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~i  302 (307)
T cd05290         227 WTNAGIAK--SASRLIKAILLDERSILPVCTLLSGEYG-LSDVALSLPTVIGAKGIERVLE-IPLDEWELEKLHKSAKAI  302 (307)
T ss_pred             eehHHHHH--HHHHHHHHHHhCCCeEEEEEEeeCCccC-CCCEEEEEEEEEeCCCceEecC-CCCCHHHHHHHHHHHHHH
Confidence            99998865  3458999999998 99999999999999 589999999999 999999999 999999999999999999


Q ss_pred             HHHH
Q psy9582         318 KNEI  321 (329)
Q Consensus       318 ~~~~  321 (329)
                      ++.+
T Consensus       303 ~~~~  306 (307)
T cd05290         303 RETI  306 (307)
T ss_pred             HHHh
Confidence            9875

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00704 MDH Malate dehydrogenase

Probab=100.00  E-value=1.7e-68  Score=495.35  Aligned_cols=314  Identities=46%  Similarity=0.713  Sum_probs=282.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||+||||+|++|+++++.|+..++++.+++.+|+|+|+++  ..+++++.++|+.|...+....++++.+.+++++|||
T Consensus         1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~--~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aD   78 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP--AMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVD   78 (323)
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC--ccCccceeeeehhhhcccccCCcEEecChHHHhCCCC
Confidence            48999999999999999999999998844456799999992  1278899999999987566555677778899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCC-CCCCcEEEechhHHH
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPD-LSYKNFTAMLRLDHN  164 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~-~~~~~i~~~t~lds~  164 (329)
                      +||++||.|++||++|.+++..|++++++++++|+++|+|++++|++|||+|+||+++++++ + +|++||+|+|.|||+
T Consensus        79 iVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~s-g~~p~~~vig~t~LDs~  157 (323)
T cd00704          79 VAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKNA-PNLPPKNFTALTRLDHN  157 (323)
T ss_pred             EEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHc-CCCCHHHEEEeeHHHHH
Confidence            99999999999999999999999999999999999996699999999999999999999999 6 699998888999999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIISIRGASS  242 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~~kg~~~  242 (329)
                      ||++++|++++++|++|++++||||||++++|+||+++++|.|+.++.+..  +.|..+++.+++++++++|++.||+++
T Consensus       158 R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~t~  237 (323)
T cd00704         158 RAKAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGASS  237 (323)
T ss_pred             HHHHHHHHHhCcCHHHceeeeEEecccCceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCcch
Confidence            999999999999999998777999999999999999999999998875221  145678999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-C--cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGT-E--NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL  317 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~-~--~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  317 (329)
                      |++.|+++ .+++++|++| +  +++|||++++|+| |+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus       238 ~~~~a~a~-~~iv~ail~~~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~-l~L~~~E~~~l~~s~~~l  315 (323)
T cd00704         238 AASAAKAI-ADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVED-LKLNDWLREKLKATEEEL  315 (323)
T ss_pred             hHHHHHHH-HHHHHHHHhCCCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence            97645444 4788888877 4  8999999999999 99999999999999 999999998 999999999999999999


Q ss_pred             HHHHHHH
Q psy9582         318 KNEILSI  324 (329)
Q Consensus       318 ~~~~~~~  324 (329)
                      +++.+.+
T Consensus       316 ~~~~~~~  322 (323)
T cd00704         316 IEEKEIA  322 (323)
T ss_pred             HHHHHhh
Confidence            9998765

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=100.00  E-value=1.4e-66  Score=482.20  Aligned_cols=305  Identities=22%  Similarity=0.354  Sum_probs=279.4

Q ss_pred             CCCC-CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           1 MLKK-PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      ||++ ++||+|||| |.||+++++.|+..++++     ||+|+|++    +++++|.++|++|+. ++..++.++.+.++
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~-----el~L~D~~----~~~~~g~~~Dl~~~~-~~~~~~~i~~~~~~   69 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIAD-----ELVIIDIN----KEKAEGDAMDLSHAV-PFTSPTKIYAGDYS   69 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----CchhHHHHHHHHhhc-cccCCeEEEeCCHH
Confidence            6754 689999998 999999999999999987     99999999    788999999999987 44445677777899


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEe
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAM  158 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~  158 (329)
                      +++|||+||+++|.|++||++|.+++..|+++++++++.+++++ |++++|++|||+|++++++++++ ++|++|+ +.+
T Consensus        70 ~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~d~~~~~~~k~s-g~p~~~viG~g  147 (315)
T PRK00066         70 DCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPVDILTYATWKLS-GFPKERVIGSG  147 (315)
T ss_pred             HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcHHHHHHHHHHHh-CCCHHHEeecC
Confidence            99999999999999999999999999999999999999999997 99999999999999999999998 8999996 456


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc----hhhhHHHHHhhhhHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW----NKNVFLPAISRRGEEI  234 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~----~~~~l~~~v~~~~~~i  234 (329)
                      |.|||+|+++++|++++++|++|+++ ||||||++++|+||+++++|+|+.+++.+. .|    ..+++.+++++++++|
T Consensus       148 t~LDs~R~~~~la~~l~v~~~~V~~~-viGeHG~s~v~~~S~~~v~g~~l~~~~~~~-~~~~~~~~~~i~~~v~~~g~~i  225 (315)
T PRK00066        148 TSLDSARFRYMLSEKLDVDPRSVHAY-IIGEHGDTEFPVWSHANVAGVPLEEYLEEN-EQYDEEDLDEIFENVRDAAYEI  225 (315)
T ss_pred             chHHHHHHHHHHHHHhCCCcccEEEE-EEecCCCcceecceeceECCEEHHHHhhhc-cCcCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999988 799999999999999999999999987553 23    2457999999999999


Q ss_pred             HHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582         235 ISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL  312 (329)
Q Consensus       235 ~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~  312 (329)
                      ++.||+++|+++.+  +..+++++++|+ +++|+|++++|+|| ++|+|||+||++ ++|++++++ ++|+++|+++|++
T Consensus       226 i~~kg~t~~~~a~~--~~~i~~ail~~~~~v~~~sv~~~g~yg-~~~v~~S~Pv~ig~~Gv~~i~~-l~L~~~E~~~L~~  301 (315)
T PRK00066        226 IEKKGATYYGIAMA--LARITKAILNNENAVLPVSAYLEGQYG-EEDVYIGVPAVVNRNGIREIVE-LPLNDDEKQKFAH  301 (315)
T ss_pred             HhcCCeehHHHHHH--HHHHHHHHHcCCCeEEEEEEEeccccC-CCCEEEEeEEEEeCCcEEEEcC-CCCCHHHHHHHHH
Confidence            99999999977653  448999999998 99999999999999 589999999999 999999998 9999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         313 SIEELKNEILSI  324 (329)
Q Consensus       313 s~~~i~~~~~~~  324 (329)
                      |+++|++.++..
T Consensus       302 s~~~l~~~~~~~  313 (315)
T PRK00066        302 SADVLKEIMDEA  313 (315)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998753

>PLN02602 lactate dehydrogenase

Probab=100.00  E-value=4.3e-66  Score=482.50  Aligned_cols=302  Identities=17%  Similarity=0.300  Sum_probs=274.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a   84 (329)
                      +||+|||| |+||+++|+.|+..++++     ||+|+|++    +++++|.++|++|+. ++.....++. ..+++++||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~-----el~LiDi~----~~~~~g~a~DL~~~~-~~~~~~~i~~~~dy~~~~da  106 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLAD-----ELALVDVN----PDKLRGEMLDLQHAA-AFLPRTKILASTDYAVTAGS  106 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----CchhhHHHHHHHhhh-hcCCCCEEEeCCCHHHhCCC
Confidence            69999998 999999999999999987     99999999    788999999999986 4433345543 358899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~lds  163 (329)
                      |+||+++|.|+++|++|.+++.+|++++++++++|+++| |++++|++|||+|++|+++++++ +||++||+| +|.||+
T Consensus       107 DiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvtNPvdv~t~~~~k~s-g~p~~rviG~gt~LDs  184 (350)
T PLN02602        107 DLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVSNPVDVLTYVAWKLS-GFPANRVIGSGTNLDS  184 (350)
T ss_pred             CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHHh-CCCHHHEEeecchHHH
Confidence            999999999999999999999999999999999999997 99999999999999999999999 799999754 589999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc-cc---hhhhHHHHHhhhhHHHHHhcC
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS-FW---NKNVFLPAISRRGEEIISIRG  239 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~-~~---~~~~l~~~v~~~~~~i~~~kg  239 (329)
                      +|+++++|+++|+++++|+++ ||||||++++|+||+++++|+|+.+++.... .+   ..+++.+++++++++|++.||
T Consensus       185 ~R~r~~lA~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~KG  263 (350)
T PLN02602        185 SRFRFLIADHLDVNAQDVQAY-IVGEHGDSSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIKLKG  263 (350)
T ss_pred             HHHHHHHHHHhCCCccceeee-EEecCCCceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999988 8999999999999999999999998875420 11   256899999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCC-CCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         240 ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVP-KDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       240 ~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip-~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      +|+|+++++  +.+++++++.|+ +++|||++++|+||+| +|+|+|+||++ ++|++++++ ++|+++|+++|++|+++
T Consensus       264 ~t~~gia~a--~a~ii~ail~d~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~-l~L~~~E~~~l~~sa~~  340 (350)
T PLN02602        264 YTSWAIGYS--VASLVRSLLRDQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVN-VHLTDEEAERLRKSAKT  340 (350)
T ss_pred             ccHHHHHHH--HHHHHHHHHhcCCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHHHHHH
Confidence            999988764  348999999998 9999999999999994 89999999999 999999998 99999999999999999


Q ss_pred             HHHHHHHH
Q psy9582         317 LKNEILSI  324 (329)
Q Consensus       317 i~~~~~~~  324 (329)
                      |++.++.+
T Consensus       341 l~~~~~~~  348 (350)
T PLN02602        341 LWEVQSQL  348 (350)
T ss_pred             HHHHHHHh
Confidence            99887654

>cd05295 MDH_like Malate dehydrogenase-like

Probab=100.00  E-value=2.4e-66  Score=493.04  Aligned_cols=313  Identities=28%  Similarity=0.452  Sum_probs=284.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |+++.+|+|+||||.+|+++.+.++.+.++|+++|+.|+|+|+.  +.+++++|.++||+|++++++.++.++++.++++
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~--~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~  197 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSP--ENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAF  197 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCC--CchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHh
Confidence            55679999999999999999999999999999999999999994  2278899999999999877776788888999999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEec
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR--DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML  159 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p--~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t  159 (329)
                      +|||+||+++|.||++|++|.+++..|++++++++++|++++ |  ++++|+.|||+|++|+++++++|++|++||+|++
T Consensus       198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a-~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~g  276 (452)
T cd05295         198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA-KEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVA  276 (452)
T ss_pred             CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEec
Confidence            999999999999999999999999999999999999999998 7  8888999999999999999999999999998887


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecc------------eehhhhhccCccchhhhHHHHH
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNG------------VLIRDMINNNSFWNKNVFLPAI  227 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~------------~p~~~~~~~~~~~~~~~l~~~v  227 (329)
                      .+|++|+++++|+++|++|++|+..+||||||+++||+||+++|+|            +|+.+++.++ .|..+++.+.+
T Consensus       277 tlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~-~w~~~~~~~~v  355 (452)
T cd05295         277 RLQENRAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDS-KWINGEFVATL  355 (452)
T ss_pred             chHHHHHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEEcccccccccccccCccHHHHhcch-hhhHHHHHHHH
Confidence            7889999999999999999999887799999999999999999987            9999988665 67788999999


Q ss_pred             hhhhHHHHHhcCCccHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCC
Q psy9582         228 SRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEID  303 (329)
Q Consensus       228 ~~~~~~i~~~kg~~~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~  303 (329)
                      ++++.   .+||.+.++++ ++++ +++++|++|  + +|+|||++++|+||+|+|++||+||++ ++|++.+.+ ++|+
T Consensus       356 ~~rg~---~rkgsT~~siA-~A~~-~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~-L~L~  429 (452)
T cd05295         356 KSLSS---SLNHEAAISPA-HAIA-TTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD-LELS  429 (452)
T ss_pred             HHHHH---hccCChHHHHH-HHHH-HHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC-CCCC
Confidence            99988   55665555444 4445 666666665  3 899999999999999999999999999 999999988 9999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q psy9582         304 KFSRKKINLSIEELKNEILSI  324 (329)
Q Consensus       304 ~~E~~~l~~s~~~i~~~~~~~  324 (329)
                      ++|+++|++|+++|+++.+.+
T Consensus       430 e~E~~kL~~S~~eL~~E~~~~  450 (452)
T cd05295         430 EILREVLKRITSDLIQEKLVA  450 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999998765

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=100.00  E-value=3e-66  Score=476.33  Aligned_cols=293  Identities=24%  Similarity=0.334  Sum_probs=269.6

Q ss_pred             EEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEE
Q psy9582          10 ITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAIL   89 (329)
Q Consensus        10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~   89 (329)
                      |||+ |+||+++|+.|+..++++     ||+|+|++    +++++|.++|++|+......+++++.+.|++++|||+||+
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~-----el~L~Di~----~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVi   70 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIAD-----EIVLIDIN----KDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVI   70 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----CChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEE
Confidence            6898 999999999999999987     99999999    7889999999999874444556777778999999999999


Q ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechhHHHHHHH
Q psy9582          90 IGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRLDHNRAIA  168 (329)
Q Consensus        90 ~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~~~  168 (329)
                      ++|.|++|||+|.+++.+|++++++++++|++++ |++++|++|||+|++|+++++++ ++|++|+ +.+|.|||+|+++
T Consensus        71 tag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~~~s-g~p~~~viG~gt~LDs~R~~~  148 (299)
T TIGR01771        71 TAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSG-FDGIFLVATNPVDILTYVAWKLS-GFPKNRVIGSGTVLDTARLRY  148 (299)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHh-CCCHHHEEeccchHHHHHHHH
Confidence            9999999999999999999999999999999996 99999999999999999999999 9999996 5569999999999


Q ss_pred             HHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC---ccchhhhHHHHHhhhhHHHHHhcCCccHHH
Q psy9582         169 KLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---SFWNKNVFLPAISRRGEEIISIRGASSAAS  245 (329)
Q Consensus       169 ~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~---~~~~~~~l~~~v~~~~~~i~~~kg~~~~~~  245 (329)
                      ++|++++++|++|+++ |||+||++++|+||+++++|+|+.+++.+.   ..+..+++.+++++++++|++.||+++|++
T Consensus       149 ~la~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~~~  227 (299)
T TIGR01771       149 LLAEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYYGI  227 (299)
T ss_pred             HHHHHhCcCcCeEEEE-EEecCCCceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeHHH
Confidence            9999999999999988 899999999999999999999999887431   023467899999999999999999999988


Q ss_pred             HHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582         246 AASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN  319 (329)
Q Consensus       246 ~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  319 (329)
                      +++  +.+++++|+.|+ +++|||++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.||+
T Consensus       228 a~a--~~~~i~ail~d~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~ik~  299 (299)
T TIGR01771       228 GMA--VARIVEAILHDENRVLPVSAYLDGEYGI-KDVYIGVPAVLGRNGVEEIIE-LPLSDEEKEAFQKSAETLKK  299 (299)
T ss_pred             HHH--HHHHHHHHHcCCCcEEEEEEEecccCCC-CCEEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHHHhC
Confidence            763  458999999998 999999999999998 68999999999 999999998 99999999999999999874

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=8.2e-66  Score=475.71  Aligned_cols=300  Identities=19%  Similarity=0.272  Sum_probs=272.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~   82 (329)
                      .+||+|||| |+||+++|+.|+..++.+     ||+|+|++    +++++|.++|++|+. ++.  ..++.++ .|++++
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~-----el~LiD~~----~~~~~g~a~Dl~~~~-~~~~~~~v~~~~-dy~~~~   70 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLAD-----ELVLVDVV----EDKLKGEAMDLQHGS-AFLKNPKIEADK-DYSVTA   70 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----ccHHHHHHHHHHHhh-ccCCCCEEEECC-CHHHhC
Confidence            479999998 999999999999999987     99999999    778999999999986 333  2444434 478999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~l  161 (329)
                      |||+||+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|++++++++++ ++|++|++| +|.|
T Consensus        71 ~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~k~s-g~p~~~viG~gt~L  148 (312)
T cd05293          71 NSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVVSNPVDIMTYVAWKLS-GLPKHRVIGSGCNL  148 (312)
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEccChHHHHHHHHHHHh-CCCHHHEEecCchH
Confidence            99999999999999999999999999999999999999997 99999999999999999999999 999999554 5999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC----ccchhhhHHHHHhhhhHHHHHh
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN----SFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~----~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |++|+++++|+++++++++|+++ |||+||++++|+||+++++|+|+.+++...    .....+++.+++++++++|++.
T Consensus       149 d~~R~~~~la~~l~v~~~~v~~~-v~GeHG~s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~  227 (312)
T cd05293         149 DSARFRYLIAERLGVAPSSVHGW-IIGEHGDSSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKL  227 (312)
T ss_pred             HHHHHHHHHHHHhCCChhhEEEE-EeecCCCCccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999988 799999999999999999999999886321    0113578999999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||+++|+++.  ++.+++++|++|+ .++|++++++|+||+|+|++||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       228 kg~t~~~~a~--a~~~ii~ail~d~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~  304 (312)
T cd05293         228 KGYTSWAIGL--SVADLVDAILRNTGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIK-QPLTEEEQEKLQKSAD  304 (312)
T ss_pred             cCCchHHHHH--HHHHHHHHHHcCCCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEec-CCCCHHHHHHHHHHHH
Confidence            9999998874  3458999999998 999999999999999999999999999 999999998 9999999999999999


Q ss_pred             HHHHHHH
Q psy9582         316 ELKNEIL  322 (329)
Q Consensus       316 ~i~~~~~  322 (329)
                      .|++.++
T Consensus       305 ~i~~~~~  311 (312)
T cd05293         305 TLWEVQK  311 (312)
T ss_pred             HHHHHhh
Confidence            9998765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=100.00  E-value=8e-66  Score=478.65  Aligned_cols=315  Identities=46%  Similarity=0.767  Sum_probs=282.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ++.||+||||+|++|+++++.|+..++++.++..+|+|+|+++  ..+++.+.++|+.|...++..+++++.+.+++++|
T Consensus         1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~--~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~   78 (325)
T cd01336           1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP--ALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKD   78 (325)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC--ccccccceeeehhhccccccCCceecCCHHHHhCC
Confidence            4789999999999999999999999887533334899999972  24567888999999875555567777777899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDH  163 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds  163 (329)
                      ||+||++||.+++++++|.+++..|+++++++++.|+++++|++++|++|||+|+||++++++++++|+++|+++|.||+
T Consensus        79 aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs  158 (325)
T cd01336          79 VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDH  158 (325)
T ss_pred             CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHH
Confidence            99999999999999999999999999999999999999976899999999999999999999977898888999999999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeec----ceehhhhhccCccchhhhHHHHHhhhhHHHHHh-c
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN----GVLIRDMINNNSFWNKNVFLPAISRRGEEIISI-R  238 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~----~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~-k  238 (329)
                      +|+++++|++++++|++|++++||||||++++|+||+++++    |+|+.+++.++ .|..+++.+++++++++|++. +
T Consensus       159 ~R~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v~~~~~g~~~~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~~~  237 (325)
T cd01336         159 NRAKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVELNGKGKPAREAVKDD-AWLNGEFISTVQKRGAAVIKARK  237 (325)
T ss_pred             HHHHHHHHHHhCcChhhceEeEEEEcCCCCeeeccccceeecCCCCccHHHHhccc-chhHHHHHHHHHhhHHHHHHccc
Confidence            99999999999999999988889999999999999999999    99999988664 566889999999999999996 5


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSI  314 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~  314 (329)
                      |++.|+++.  ++..+++++++|  + +++|||++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|+
T Consensus       238 g~t~~~~a~--~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~  314 (325)
T cd01336         238 LSSAMSAAK--AICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQG-LSIDDFSREKIDATA  314 (325)
T ss_pred             cchHHHHHH--HHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHH
Confidence            566666654  344788888876  5 999999999999999999999999999 999999998 999999999999999


Q ss_pred             HHHHHHHHHH
Q psy9582         315 EELKNEILSI  324 (329)
Q Consensus       315 ~~i~~~~~~~  324 (329)
                      +.|+++++.+
T Consensus       315 ~~l~~e~~~~  324 (325)
T cd01336         315 KELVEEKETA  324 (325)
T ss_pred             HHHHHHHHhh
Confidence            9999999765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=2.1e-65  Score=474.98  Aligned_cols=312  Identities=46%  Similarity=0.749  Sum_probs=274.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||+||||+|+||+++++.|+..++++.+++.+|+|+|+++  ..++++++++|+.|...++...+..+++.+++++|||+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~--~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDi   78 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPP--AMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDV   78 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCC--cccccceeEeehhcccchhcCceeccCChHHHhCCCCE
Confidence            6999999999999999999999998644445799999972  24468999999999875554455555577999999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHHHHH
Q psy9582          87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRA  166 (329)
Q Consensus        87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~  166 (329)
                      ||+++|.|++++++|.+++..|++++++++++|+++++|++++|++|||+|+||++++++++++|++.|+++|.|||+||
T Consensus        79 VVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~  158 (324)
T TIGR01758        79 AILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRA  158 (324)
T ss_pred             EEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHH
Confidence            99999999999999999999999999999999999955999999999999999999999995555555788999999999


Q ss_pred             HHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeec-c---eehhhhhccCccchhhhHHHHHhhhhHHHHHhcC-Cc
Q psy9582         167 IAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN-G---VLIRDMINNNSFWNKNVFLPAISRRGEEIISIRG-AS  241 (329)
Q Consensus       167 ~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~-~---~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg-~~  241 (329)
                      ++++|++++++|++|+..+||||||++++|+||+++++ |   +|+.+++.+. .|+++++.+++++++++|++.|| ++
T Consensus       159 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~~g~~~~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~k~~~t  237 (324)
T TIGR01758       159 LAQVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATVTKGGKQKPVREAIKDD-AYLDGEFITTVQQRGAAIIRARKLSS  237 (324)
T ss_pred             HHHHHHHhCCChhhceEeEEEECCCCCcccccccceecCCCCccCHHHHhcch-hhHHHHHHHHHHhCHHHHHhccCCCH
Confidence            99999999999999987669999999999999999999 9   9999987654 46678999999999999999776 55


Q ss_pred             cHHHHHHHHHHHHHHHHh--CCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIF--GTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~--~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      .|+++.  ++..++++|+  .|+ +++|||++++|+ ||+|+|+|||+||++ ++|++.+.+ ++|+++|+++|++|++.
T Consensus       238 ~~~ia~--~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~e-l~L~~~E~~~l~~s~~~  314 (324)
T TIGR01758       238 ALSAAK--AAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEG-LCVDDSSRKKLALTAKE  314 (324)
T ss_pred             HHHHHH--HHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecC-CCCCHHHHHHHHHHHHH
Confidence            555554  3458888888  677 999999999999 999999999999999 777776666 99999999999999999


Q ss_pred             HHHHHHHH
Q psy9582         317 LKNEILSI  324 (329)
Q Consensus       317 i~~~~~~~  324 (329)
                      |++.++.+
T Consensus       315 lk~~~~~~  322 (324)
T TIGR01758       315 LEEERDEA  322 (324)
T ss_pred             HHHHHHHh
Confidence            99999775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG1495|consensus

Probab=100.00  E-value=3.1e-65  Score=442.56  Aligned_cols=299  Identities=21%  Similarity=0.310  Sum_probs=276.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~   82 (329)
                      ..||.|+|+ |.+|.++|..++.+++.+     |++|+|.+    +++++|+.|||+|.+ ++.  .++....| |.+.+
T Consensus        20 ~~KItVVG~-G~VGmAca~siL~k~Lad-----el~lvDv~----~dklkGE~MDLqH~s-~f~~~~~V~~~~D-y~~sa   87 (332)
T KOG1495|consen   20 HNKITVVGV-GQVGMACAISILLKGLAD-----ELVLVDVN----EDKLKGEMMDLQHGS-AFLSTPNVVASKD-YSVSA   87 (332)
T ss_pred             CceEEEEcc-chHHHHHHHHHHHhhhhh-----ceEEEecC----cchhhhhhhhhcccc-ccccCCceEecCc-ccccC
Confidence            479999999 999999999999999987     99999999    889999999999986 555  45555555 88999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~l  161 (329)
                      ++++||+|||.-+++|++|.+++++|+.+++.+.+++.+|. ||++++++|||+|+|||+.||.+ +||++| |+.||+|
T Consensus        88 ~S~lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~yS-pd~~llvvSNPVDilTYv~wKLS-gfP~nRViGsGcnL  165 (332)
T KOG1495|consen   88 NSKLVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYS-PDCILLVVSNPVDILTYVTWKLS-GFPKNRVIGSGCNL  165 (332)
T ss_pred             CCcEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCchHHHHHHHHHHc-CCcccceeccCcCc
Confidence            99999999999889999999999999999999999999995 99999999999999999999999 999999 6778999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC-----c-cchhhhHHHHHhhhhHHHH
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN-----S-FWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~-----~-~~~~~~l~~~v~~~~~~i~  235 (329)
                      ||+||++.++++||++|++++++ |+||||++.+|.||.+.+.|.|+.++.++-     | .|  +++.+++.+.+|||+
T Consensus       166 DsaRFryLi~~~Lg~~pss~hgw-IiGEHGdSsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayevi  242 (332)
T KOG1495|consen  166 DSARFRYLIGNRLGVHPSSCHGW-IIGEHGDSSVPVWSGVNIAGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEVI  242 (332)
T ss_pred             cHHHHHHHHHHHhCCCcccceEE-EeeccCCccceecccccccceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHHH
Confidence            99999999999999999999999 789999999999999999999999887552     1 35  588888999999999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      +.||+|+|+++.+  +.+|.++|++|. .++|+|+...|.||+.+|+|+|+||++ ++|+..++. .+|+++|.++|++|
T Consensus       243 klKGyTswaIgls--va~l~~ail~n~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~-~~Lt~~E~akL~kS  319 (332)
T KOG1495|consen  243 KLKGYTSWAIGLS--VADLAQAILRNLRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVK-QKLTDEEVAKLKKS  319 (332)
T ss_pred             HhcCchHHHHHHH--HHHHHHHHHhCcCceeeeeeccccccCCCCceEEecceeecCCchhhhhc-ccCCHHHHHHHHHH
Confidence            9999999999874  559999999998 999999999999999889999999999 999999998 99999999999999


Q ss_pred             HHHHHHHHHH
Q psy9582         314 IEELKNEILS  323 (329)
Q Consensus       314 ~~~i~~~~~~  323 (329)
                      ++.|.+.+..
T Consensus       320 a~tl~~~q~~  329 (332)
T KOG1495|consen  320 AKTLLEAQKS  329 (332)
T ss_pred             HHHHHHHHHh
Confidence            9999987654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=100.00  E-value=5.8e-64  Score=464.64  Aligned_cols=299  Identities=25%  Similarity=0.379  Sum_probs=271.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|+++++.|+..++..     +|+|+|++    ++++++.++|++|..........+..+.++++++||
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~-----ei~l~D~~----~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aD   70 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIAD-----ELVLIDIN----EEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDAD   70 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----cchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCC
Confidence            48999998 999999999999999866     99999999    778899999999876333334455556688999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechhHHH
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRLDHN  164 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~  164 (329)
                      +||+++|.|+++|++|.+++.+|++++++++++|++++ |++++|++|||+|++|+++++++ ++|++|| +.+|.||++
T Consensus        71 IVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d~~~~~~~~~~-g~p~~~v~g~gt~LDs~  148 (306)
T cd05291          71 IVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVDVITYVVQKLS-GLPKNRVIGTGTSLDTA  148 (306)
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHHHHHHHHHHHh-CcCHHHEeeccchHHHH
Confidence            99999999999999999999999999999999999997 99999999999999999999997 9999995 556999999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccch---hhhHHHHHhhhhHHHHHhcCCc
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN---KNVFLPAISRRGEEIISIRGAS  241 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~---~~~l~~~v~~~~~~i~~~kg~~  241 (329)
                      |+++++|+++++++++|+++ |||+||++++|+||+++++|.|+.+++.+. .|.   .+++.+++++++++|++.||++
T Consensus       149 R~~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v~g~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~~ii~~kg~t  226 (306)
T cd05291         149 RLRRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTVGGKPLLDLLKEG-KLSELDLDEIEEDVRKAGYEIINGKGAT  226 (306)
T ss_pred             HHHHHHHHHHCCCcccceEE-EEecCCCceeecceeeEEcCEEHHHHhhcc-ccChHHHHHHHHHHHHHHHHHHHccCcc
Confidence            99999999999999999987 899999999999999999999999987643 342   6789999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN  319 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  319 (329)
                      +|+++++  +.+++++|++|+ +++|+|++++|+||. +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++
T Consensus       227 ~~~~a~a--~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~l~~  302 (306)
T cd05291         227 YYGIATA--LARIVKAILNDENAILPVSAYLDGEYGE-KDVYIGVPAIIGRNGVEEVIE-LDLTEEEQEKFEKSADIIKE  302 (306)
T ss_pred             HHHHHHH--HHHHHHHHHcCCCEEEEEEEEeccccCC-CCEEEEEEEEEeCCCEEEEEC-CCCCHHHHHHHHHHHHHHHH
Confidence            9988763  448999999998 999999999999995 89999999999 999999998 99999999999999999998


Q ss_pred             HHH
Q psy9582         320 EIL  322 (329)
Q Consensus       320 ~~~  322 (329)
                      .++
T Consensus       303 ~~~  305 (306)
T cd05291         303 NIK  305 (306)
T ss_pred             Hhh
Confidence            865

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN00135 malate dehydrogenase

Probab=100.00  E-value=3e-64  Score=462.69  Aligned_cols=297  Identities=40%  Similarity=0.646  Sum_probs=265.9

Q ss_pred             HHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHH
Q psy9582          25 IANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSEL  104 (329)
Q Consensus        25 l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~  104 (329)
                      |+.+.+++.++++.++|+|++  +++++++|+++|+.|+..++...++++++.|++++|||+||+++|.|+++|++|.++
T Consensus         2 ~~~g~~~g~~~~~~l~L~D~~--~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dl   79 (309)
T PLN00135          2 IARGVMLGPDQPVILHMLDIP--PAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDV   79 (309)
T ss_pred             cccccccCCCCeEEEEEecCc--ccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHH
Confidence            456778887888999999999  223899999999999875554566666676999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeE
Q psy9582         105 LAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRLDHNRAIAKLASKLNEPVSSIKK  183 (329)
Q Consensus       105 ~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~~~~~~v~~  183 (329)
                      +..|++++++++++|+++++|++++|++|||+|+||+++++.+ ++|++| |+++|.|||+||++++|++++++|++|+.
T Consensus        80 l~~N~~I~~~i~~~i~~~~~p~aivivvsNPvDv~t~~~~~~s-g~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~  158 (309)
T PLN00135         80 MSKNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKEFA-PSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKN  158 (309)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEEEeCCcHHHHHHHHHHHc-CCCCccEEEeeehHHHHHHHHHHHHHhCcChhhcee
Confidence            9999999999999999963499999999999999999999999 888877 78889999999999999999999999954


Q ss_pred             EEEEecCCCceeecccCCee----cceehhhhhccCccchhhhHHHHHhhhhHHHHHh-cCCccHHHHHHHHHHHHHHHH
Q psy9582         184 VFVWGNHSLSMYPDYRYATV----NGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI-RGASSAASAASAAIDHIKDWI  258 (329)
Q Consensus       184 ~~v~G~hg~~~~p~~s~~~v----~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~-kg~~~~~~~a~~~~~~l~~~i  258 (329)
                      .+||||||+++||+||++++    +|+|+.+++.++ +|+++++.+++++++++|++. ||+++|+++++  +.+++++|
T Consensus       159 ~~VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~-~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a--~~~iv~ai  235 (309)
T PLN00135        159 VIIWGNHSSTQYPDVNHATVKTPSGEKPVRELVADD-AWLNGEFITTVQQRGAAIIKARKLSSALSAASS--ACDHIRDW  235 (309)
T ss_pred             eEEEEcCCCceeeccccceEecCCCCcCHHHHhCch-hhHHHHHHHHHHHHHHHHHHccCccHHHHHHHH--HHHHHHHH
Confidence            44899999999999999999    999999987554 466889999999999999997 67778877653  44788887


Q ss_pred             hC--CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9582         259 FG--TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI  328 (329)
Q Consensus       259 ~~--~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~  328 (329)
                      .+  |+ +++|+|++++|+||+|+|+|||+||++ ++|++.+++ ++|+++|+++|++|++.|+++++.+.+.|
T Consensus       236 ~~~~~~~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~-l~L~~~E~~~l~~S~~~lk~~~~~~~~~~  308 (309)
T PLN00135        236 VLGTPEGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQG-LSIDEFSRKKMDATAKELKEEKELAYSCL  308 (309)
T ss_pred             HhCCcCCeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            76  77 999999999999999899999999999 899999988 99999999999999999999999998876

>TIGR01756 LDH_protist lactate dehydrogenase

Probab=100.00  E-value=9.8e-64  Score=460.47  Aligned_cols=299  Identities=36%  Similarity=0.588  Sum_probs=265.3

Q ss_pred             HHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHH
Q psy9582          23 FRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERS  102 (329)
Q Consensus        23 ~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~  102 (329)
                      +.|+.+.+|+ ++|+.++|+|++  +.+++++|.++|+.|+..+.......+++.+++++|||+||+++|.|+++|++|.
T Consensus         3 ~~~~~g~~~g-~~~~~l~L~D~~--~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~   79 (313)
T TIGR01756         3 HWIANGDLYG-NRPVCLHLLEIP--PALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRA   79 (313)
T ss_pred             ceeccCcccC-CCeEEEEEecCC--CccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHH
Confidence            4567888999 889999999998  2248999999999998743333334456655899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH-HHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCe
Q psy9582         103 ELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM-KSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI  181 (329)
Q Consensus       103 ~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~-~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v  181 (329)
                      +++..|++++++++++|+++++|++++|++|||+|+||++++ +.+ ++|++.|+++|.|||+||++++|++++++|++|
T Consensus        80 dll~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~s-g~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V  158 (313)
T TIGR01756        80 DLLTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHAP-KLSAENFSSLCMLDHNRAVSRIASKLKVPVDHI  158 (313)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHcC-CCCHHHEEecccHHHHHHHHHHHHHhCcChhhe
Confidence            999999999999999999998566899999999999999995 666 999887888999999999999999999999999


Q ss_pred             eEEEEEecCCCceeecccCCee--cceehhhh--hccCccchhhhHHHHHhhhhHHHHHhcCCccHHHHHHHHHHHHHHH
Q psy9582         182 KKVFVWGNHSLSMYPDYRYATV--NGVLIRDM--INNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDW  257 (329)
Q Consensus       182 ~~~~v~G~hg~~~~p~~s~~~v--~~~p~~~~--~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~~~~a~~~~~~l~~~  257 (329)
                      ++++||||||++++|+||++++  +|.|+..+  +. + .|.++++.+++++++++|++.||+|+|++++++++ .++++
T Consensus       159 ~~~~V~GeHG~s~vp~~S~~~V~~~G~~~~~~~~~~-~-~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~-~iv~a  235 (313)
T TIGR01756       159 YHVVVWGNHAESMVADLTHAEFTKNGKHQKVFDELC-R-DYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASL-QHMKA  235 (313)
T ss_pred             eeeEEEECCCCceeecccccEEecCCeehhHhhhcC-c-HhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHH-HHHHH
Confidence            8887999999999999999999  99997644  32 2 35678999999999999999999999988865544 78888


Q ss_pred             HhC--CC-cEEEEEeecC--CCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9582         258 IFG--TE-NWVTMGIPSD--GSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI  328 (329)
Q Consensus       258 i~~--~~-~i~~~~v~~~--g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~  328 (329)
                      |++  |+ +++|||++++  |+||+|+|+++|+||++ ++|+++++++++|+++|+++|++|+++|+++.+.+.++|
T Consensus       236 il~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~~l~~e~~~~~~~~  312 (313)
T TIGR01756       236 WLFGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLFEERETALKAL  312 (313)
T ss_pred             HhcCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            888  66 9999999985  39999889999999999 999999998899999999999999999999999998876

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=100.00  E-value=2.9e-63  Score=458.09  Aligned_cols=295  Identities=24%  Similarity=0.361  Sum_probs=270.6

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCCccE
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKDANI   86 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~aDi   86 (329)
                      |+|||+ |.||+++++.|+..++++     ||+|+|++    ++++++.++||.|...... ..+..+++ ++++++||+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~-----el~l~D~~----~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDi   69 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLAS-----ELVLVDVN----EEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADI   69 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----ccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCE
Confidence            689998 999999999999999987     99999999    7889999999999874422 23333344 889999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHHHH
Q psy9582          87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDHNR  165 (329)
Q Consensus        87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~r  165 (329)
                      ||+++|.|+++|++|.+++.+|++++++++++|+++| |++++|++|||+|++++++++++ ++|++|++|. |.+||+|
T Consensus        70 VIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d~~~~~~~~~s-g~~~~kviG~gt~lDs~r  147 (300)
T cd00300          70 VVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVDILTYVAQKLS-GLPKNRVIGSGTLLDSAR  147 (300)
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHHHHHHHHHHHh-CcCHHHEEecCCcHHHHH
Confidence            9999999999999999999999999999999999998 99999999999999999999999 8999997665 8999999


Q ss_pred             HHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccHHH
Q psy9582         166 AIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAAS  245 (329)
Q Consensus       166 ~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~~~  245 (329)
                      +++++|+++++++++|+++ |+|+||++++|+||+++++|.|+.+++++. +|..+++.+++++++++|++.||+++|++
T Consensus       148 ~~~~la~~l~v~~~~v~~~-viGeHg~s~v~~~S~~~v~g~p~~~~~~~~-~~~~~~l~~~v~~~~~~ii~~kg~t~~~~  225 (300)
T cd00300         148 FRSLLAEKLDVDPQSVHAY-VLGEHGDSQVVAWSTATVGGLPLEELAPFT-KLDLEAIEEEVRTSGYEIIRLKGATNYGI  225 (300)
T ss_pred             HHHHHHHHhCCCcccEEEE-EEeccCCceeeeeeeeEECCEEHHHhhccc-HHHHHHHHHHHHHHHHHHHHccCcchHHH
Confidence            9999999999999999988 789999999999999999999999988664 57789999999999999999999999977


Q ss_pred             HHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy9582         246 AASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI  321 (329)
Q Consensus       246 ~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~  321 (329)
                      +.+  +.++++++++|+ +++|+|++++|+||. +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++.+
T Consensus       226 a~a--~~~~~~ai~~~~~~v~~~s~~~~g~yg~-~~~~~s~Pv~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~~l~~~~  299 (300)
T cd00300         226 ATA--IADIVKSILLDERRVLPVSAVQEGQYGI-EDVALSVPAVVGREGVVRILE-IPLTEDEEAKLQKSAEALKEVL  299 (300)
T ss_pred             HHH--HHHHHHHHHcCCCeEEEEEEEecCccCC-CCEEEEEEEEEeCCCeEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence            643  448999999998 999999999999994 89999999999 999999998 9999999999999999999875

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PTZ00117 malate dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-62  Score=451.82  Aligned_cols=305  Identities=26%  Similarity=0.390  Sum_probs=271.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al   81 (329)
                      +.+||+|||| |++|+++++.++..++ .     +|+|+|++    ++++++.++|+.|......  .+++.+++ ++++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~-----~l~L~Di~----~~~~~g~~lDl~~~~~~~~~~~~i~~~~d-~~~l   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNL-G-----DVVLYDVI----KGVPQGKALDLKHFSTLVGSNINILGTNN-YEDI   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCC-C-----eEEEEECC----CccchhHHHHHhhhccccCCCeEEEeCCC-HHHh
Confidence            5679999998 9999999999999886 4     89999999    6778899999998753222  24444444 6799


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-ch
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LR  160 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~  160 (329)
                      +|||+||+++|.+++++++|.+++..|.++++++++.|+++| |++|+|++|||+|++++++++++ ++|++|++|. |.
T Consensus        72 ~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsNP~di~t~~~~~~s-~~p~~rviG~gt~  149 (319)
T PTZ00117         72 KDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTNPLDCMVKVFQEKS-GIPSNKICGMAGV  149 (319)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHhh-CCCcccEEEecch
Confidence            999999999999999999999999999999999999999998 99999999999999999999998 9999997665 59


Q ss_pred             hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccch---hhhHHHHHhhhhHHHHHh
Q psy9582         161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN---KNVFLPAISRRGEEIISI  237 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~---~~~l~~~v~~~~~~i~~~  237 (329)
                      +|++|+++++|++++++|++|+++ |+||||++++|+||+++++|+|+.+++++. .|.   .+++.+++++++++|++.
T Consensus       150 lds~R~~~~la~~l~v~~~~v~~~-viGeHg~~~v~~~s~~~v~g~p~~~~~~~~-~~~~~~~~~i~~~v~~~g~~ii~~  227 (319)
T PTZ00117        150 LDSSRFRCNLAEKLGVSPGDVSAV-VIGGHGDLMVPLPRYCTVNGIPLSDFVKKG-AITEKEINEIIKKTRNMGGEIVKL  227 (319)
T ss_pred             HHHHHHHHHHHHHhCCCcccceEE-EeecCCCcEEeceeeceECCEEHHHHhhcc-ccCHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999988 689999999999999999999999987543 332   567889999999999996


Q ss_pred             --cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         238 --RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       238 --kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                        ||++.|+++.  ++.+++++|++|+ +++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus       228 ~~kg~t~~~~a~--a~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~~~~s~P~~ig~~Gv~~i~~-l~l~~~E~~~l~~s  303 (319)
T PTZ00117        228 LKKGSAFFAPAA--AIVAMIEAYLKDEKRVLVCSVYLNGQYNCK-NLFVGVPVVIGGKGIEKVIE-LELNAEEKELFDKS  303 (319)
T ss_pred             cCCCChHHHHHH--HHHHHHHHHhcCCCeEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHH
Confidence              6666666654  3458999999998 9999999999999994 9999999999 999999999 99999999999999


Q ss_pred             HHHHHHHHHHHHhhh
Q psy9582         314 IEELKNEILSISHLI  328 (329)
Q Consensus       314 ~~~i~~~~~~~~~~~  328 (329)
                      ++.|++.++.+..++
T Consensus       304 ~~~l~~~~~~~~~~~  318 (319)
T PTZ00117        304 IESIQELTQKAKALI  318 (319)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999988765

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=3.2e-61  Score=446.10  Aligned_cols=300  Identities=22%  Similarity=0.313  Sum_probs=271.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.+|++++..|+..++..     +|+|+|++    ++++++.++|+.|.. ++.....++++.++++++||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~-----ev~l~D~~----~~~~~g~a~dl~~~~-~~~~~~~i~~~d~~~l~~aD   69 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLAS-----EIVLVDIN----KAKAEGEAMDLAHGT-PFVKPVRIYAGDYADCKGAD   69 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCC-----EEEEEECC----chhhhhHHHHHHccc-cccCCeEEeeCCHHHhCCCC
Confidence            48999999 999999999999998766     99999999    777888999999875 33333445556689999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechhHHH
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRLDHN  164 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~  164 (329)
                      +||++++.+++++++|.+++..|+++++++++.+++++ |+++++++|||+|++++++++++ ++|++|+ +.+|.|||+
T Consensus        70 iViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~d~~~~~~~~~s-g~p~~~viG~gt~LDs~  147 (308)
T cd05292          70 VVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVDVLTYVAYKLS-GLPPNRVIGSGTVLDTA  147 (308)
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHH-CcCHHHeecccchhhHH
Confidence            99999999999999999999999999999999999997 99999999999999999999999 9999995 556999999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc----cchhhhHHHHHhhhhHHHHHhcCC
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS----FWNKNVFLPAISRRGEEIISIRGA  240 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~----~~~~~~l~~~v~~~~~~i~~~kg~  240 (329)
                      |+++++|+++++++++|+++ |||+||++++|+||+++++|+|+.+++...+    .+..+++.+++++++++|++.||+
T Consensus       148 R~~~~la~~~~v~~~~v~~~-viGeHg~~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~kg~  226 (308)
T cd05292         148 RFRYLLGEHLGVDPRSVHAY-IIGEHGDSEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERKGA  226 (308)
T ss_pred             HHHHHHHHHhCCCccceece-eeccCCCcEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence            99999999999999999988 8999999999999999999999998875410    124678999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      ++|+++++  +.+++++|+.|+ +++|+|++++|+||+ +|+|||+||+| ++|++++++ ++||++|+++|++|++.|+
T Consensus       227 t~~~~a~a--~~~i~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~~i~  302 (308)
T cd05292         227 TYYAIGLA--LARIVEAILRDENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVLP-PPLSEEEEEALRASAEVLK  302 (308)
T ss_pred             cHHHHHHH--HHHHHHHHHcCCCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHHHHH
Confidence            99988753  458999999998 999999999999998 79999999999 999999999 9999999999999999999


Q ss_pred             HHHHH
Q psy9582         319 NEILS  323 (329)
Q Consensus       319 ~~~~~  323 (329)
                      +.++.
T Consensus       303 ~~~~~  307 (308)
T cd05292         303 EAIES  307 (308)
T ss_pred             HHHhh
Confidence            88763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=3.6e-61  Score=444.37  Aligned_cols=296  Identities=25%  Similarity=0.379  Sum_probs=266.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~~   83 (329)
                      +||+|||+ |.||+.+|..++..++.      +|+|+|++    ++...+.++|+.+.....  ..+++.+++ ++++++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~------~VvlvDi~----~~l~~g~a~d~~~~~~~~~~~~~i~~t~d-~~~~~~   69 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELA------DLVLLDVV----EGIPQGKALDMYEASPVGGFDTKVTGTNN-YADTAN   69 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCC------eEEEEeCC----CChhHHHHHhhhhhhhccCCCcEEEecCC-HHHhCC
Confidence            68999998 99999999999998864      79999998    666777888888754211  235666565 567999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|++|+++++++ |+|++|++|. |.||
T Consensus        70 aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di~t~~~~~~s-g~~~~rviG~g~~ld  147 (305)
T TIGR01763        70 SDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDAMTYVAWQKS-GFPKERVIGQAGVLD  147 (305)
T ss_pred             CCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHH-CcCHHHEEEeccchH
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 9999997665 6999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh--cCC
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI--RGA  240 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~--kg~  240 (329)
                      |+|+++.+|++|+++|++|+++ ||||||++++|+||+++++|+|+.+++.++   ..+++.+++++++++|++.  ||+
T Consensus       148 s~R~~~~la~~l~v~~~~v~~~-v~GeHg~s~~~~wS~~~i~g~~~~~~~~~~---~~~~l~~~v~~~g~~ii~~~~kg~  223 (305)
T TIGR01763       148 SARFRTFIAMELGVSVQDVTAC-VLGGHGDAMVPLVRYSTVAGIPVADLISAE---RIAEIVERTRKGGGEIVNLLKQGS  223 (305)
T ss_pred             HHHHHHHHHHHhCcCHHHeeee-EEecCCCcEEeeeeeeEECCEEHHHhcCHH---HHHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999988 899999999999999999999999887554   3578999999999999997  567


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      +.|++++  ++.+++++|++|+ .++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|+
T Consensus       224 t~~~~a~--~~~~i~~ai~~~~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~i~  299 (305)
T TIGR01763       224 AYYAPAA--SVVEMVEAILKDRKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYE-LKLDQSELALLNKSAKIVD  299 (305)
T ss_pred             hHHHHHH--HHHHHHHHHhCCCCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence            7776665  4569999999998 999999999999999 79999999999 999999999 9999999999999999999


Q ss_pred             HHHHH
Q psy9582         319 NEILS  323 (329)
Q Consensus       319 ~~~~~  323 (329)
                      +.+++
T Consensus       300 ~~~~~  304 (305)
T TIGR01763       300 ENCKM  304 (305)
T ss_pred             HHHhc
Confidence            98764

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-61  Score=443.84  Aligned_cols=302  Identities=24%  Similarity=0.338  Sum_probs=268.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~   79 (329)
                      |-+.+||+|||| |++|+++++.++..++.      +|+|+|++    ++++.+.++|+.|.....  ..+++.+++ ++
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~------~i~LvDi~----~~~~~~~~ld~~~~~~~~~~~~~I~~~~d-~~   70 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLG------DVVLFDIV----KNIPQGKALDISHSNVIAGSNSKVIGTNN-YE   70 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCC------eEEEEeCC----CchhhHHHHHHHhhhhccCCCeEEEECCC-HH
Confidence            335589999998 99999999999988873      79999999    666788899999875222  234554455 68


Q ss_pred             ccCCccEEEEeCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc
Q psy9582          80 AFKDANIAILIGSFPRKSNM-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN  154 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~  154 (329)
                      +++|||+||+++|.++++++     +|.+++..|++++++++++|+++| |++|+|++|||+|++++.+++++ ++|++|
T Consensus        71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~di~t~~~~~~s-g~p~~r  148 (321)
T PTZ00082         71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLDVMVKLLQEHS-GLPKNK  148 (321)
T ss_pred             HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHhc-CCChhh
Confidence            99999999999999999999     999999999999999999999998 99999999999999999999998 999999


Q ss_pred             EEEe-chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc---hhhhHHHHHhhh
Q psy9582         155 FTAM-LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW---NKNVFLPAISRR  230 (329)
Q Consensus       155 i~~~-t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~---~~~~l~~~v~~~  230 (329)
                      ++|. |.+|++|+++.+|+++++++++|+++ |+|+||+++||+||+++++|.|+.+++++. .+   ..+++.++++++
T Consensus       149 viGlgt~lds~R~~~~la~~l~v~~~~v~~~-viGeHg~s~v~~~S~~~i~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~  226 (321)
T PTZ00082        149 VCGMAGVLDSSRLRTYIAEKLGVNPRDVHAS-VIGAHGDKMVPLPRYVTVGGIPLSEFIKKG-LITQEEIDEIVERTRNT  226 (321)
T ss_pred             EEEecCcccHHHHHHHHHHHhCCCcccceee-EEecCCCceEecceeeEECCEEHHHhhhcc-cCCHHHHHHHHHHHHHH
Confidence            7665 59999999999999999999999988 789999999999999999999999887432 11   257899999999


Q ss_pred             hHHHHHh--cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHH
Q psy9582         231 GEEIISI--RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFS  306 (329)
Q Consensus       231 ~~~i~~~--kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E  306 (329)
                      +++|++.  ||++.|+++.  ++.+++++|+.|+ +++|||++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|
T Consensus       227 g~~i~~~~gkg~t~~~ia~--a~~~i~~ail~d~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E  302 (321)
T PTZ00082        227 GKEIVDLLGTGSAYFAPAA--AAIEMAEAYLKDKKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIE-LDLTPEE  302 (321)
T ss_pred             HHHHHhhcCCCccHHHHHH--HHHHHHHHHHcCCCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEeC-CCCCHHH
Confidence            9999996  5677776665  3458999999998 999999999999999 79999999999 999999999 9999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy9582         307 RKKINLSIEELKNEILS  323 (329)
Q Consensus       307 ~~~l~~s~~~i~~~~~~  323 (329)
                      +++|++|++.|++.++.
T Consensus       303 ~~~l~~sa~~i~~~~~~  319 (321)
T PTZ00082        303 QKKFDESIKEVKRLEAL  319 (321)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999988764

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=2.1e-61  Score=444.85  Aligned_cols=294  Identities=20%  Similarity=0.281  Sum_probs=258.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-c--CcccccCC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-E--NPITAFKD   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~--~~~~al~~   83 (329)
                      ||+||||+|+||+++|+.|+.+++.+     ||+|+|++    +  ++|.++||+|..  ...++..+ .  +++++++|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~----~--a~g~a~DL~~~~--~~~~i~~~~~~~~~~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIA----G--AAGVAADLSHIP--TAASVKGFSGEEGLENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCC----C--CcEEEchhhcCC--cCceEEEecCCCchHHHcCC
Confidence            79999999999999999999998877     99999998    4  679999999965  22245442 2  34899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh----HHHHHHHHCCCCCCCcEEEec
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT----NTYITMKSAPDLSYKNFTAML  159 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~----~~~~~~~~~~~~~~~~i~~~t  159 (329)
                      ||+||+++|.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|+    +|+++++.+ ++|++||+|.+
T Consensus        68 aDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvsNPvDv~~~i~t~~~~~~s-g~p~~rViG~g  145 (312)
T TIGR01772        68 ADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVITNPVNSTVPIAAEVLKKKG-VYDPNKLFGVT  145 (312)
T ss_pred             CCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEecCchhhHHHHHHHHHHHhc-CCChHHEEeee
Confidence            9999999999999999999999999999999999999997 99999999999998    888899988 99999988877


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC-ceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh-
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL-SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI-  237 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~-~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~-  237 (329)
                      .|||+||++++|++++++|++|+++ ||||||+ +++|+||++++.  |.   +.++   ..+++.+++++++++|++. 
T Consensus       146 ~LDsaR~r~~la~~l~v~~~~v~~~-ViGeHg~~s~vp~~S~~~~~--~~---~~~~---~~~~i~~~v~~~g~~Ii~~k  216 (312)
T TIGR01772       146 TLDIVRANTFVAELKGKDPMEVNVP-VIGGHSGETIIPLISQCPGK--VL---FTED---QLEALIHRIQNAGTEVVKAK  216 (312)
T ss_pred             cchHHHHHHHHHHHhCCCHHHeEEE-EEEecCCCcccccccccccc--CC---CCHH---HHHHHHHHHHHHHHHHHhCc
Confidence            8999999999999999999999988 8999986 999999999843  32   2222   3578999999999999997 


Q ss_pred             --cCCccHHHHHHHHHHHHHHHHh---CCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHHH
Q psy9582         238 --RGASSAASAASAAIDHIKDWIF---GTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRKK  309 (329)
Q Consensus       238 --kg~~~~~~~a~~~~~~l~~~i~---~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~~  309 (329)
                        ||+++|+++.  ++.+++++|+   .|+ .++|++ +++|+||. +|+|||+||++ ++|++++++ + +|+++|+++
T Consensus       217 ~gkg~t~~~ia~--a~~~iv~ail~~~~d~~~v~~~s-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~  291 (312)
T TIGR01772       217 AGAGSATLSMAF--AGARFVLSLVRGLKGEEGVVECA-YVESDGVT-EATFFATPLLLGKNGVEKRLG-IGKLSSFEEKM  291 (312)
T ss_pred             cCCCChhHHHHH--HHHHHHHHHHHhhCCCccEEEEE-EEccCCCc-CceEEEEEEEEcCCeeEEEEc-cCCCCHHHHHH
Confidence              4666666654  3447888888   466 899965 88999997 89999999999 999999999 8 899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhC
Q psy9582         310 INLSIEELKNEILSISHLIR  329 (329)
Q Consensus       310 l~~s~~~i~~~~~~~~~~~~  329 (329)
                      |++|++.|++.++..++|.+
T Consensus       292 l~~S~~~i~~~~~~g~~~~~  311 (312)
T TIGR01772       292 LNGALPELKKNIKKGEEFVA  311 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999998864

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>KOG1496|consensus

Probab=100.00  E-value=2.5e-62  Score=417.85  Aligned_cols=324  Identities=50%  Similarity=0.838  Sum_probs=312.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |+++.+|.|.||+|.+|+++++.++.+-.+++|||+.++|+|+.  +....++|.+|+|+|++.|++..+..+++..+++
T Consensus         1 ~~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~--~~~~~LegV~mELqD~a~PlL~~Vvattd~~~af   78 (332)
T KOG1496|consen    1 MKEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIP--PMMSVLEGVKMELQDCALPLLKGVVATTDEVEAF   78 (332)
T ss_pred             CCCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCc--hHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhh
Confidence            78889999999999999999999999999999999999999998  5577899999999999999888899999999999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      +|.|+.|+.++.||++||+|.|++..|++++++-+..+++|++|+++|++++||++..+.++.+++|.+|.++|.++|.|
T Consensus        79 kdv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRL  158 (332)
T KOG1496|consen   79 KDVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRL  158 (332)
T ss_pred             ccCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecc----eehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNG----VLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~----~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |.+|+..++|.++|++.++|+++++||||+.+|+|+..++++++    +|+.+.+.++ .|+..++.+.|++||..+++.
T Consensus       159 DhNRA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~-~wL~g~Fi~tVQkRGaavi~a  237 (332)
T KOG1496|consen  159 DHNRALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDD-AWLQGEFIETVQKRGAAVIKA  237 (332)
T ss_pred             chhhHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccc-hhhccchhhHHHhcchHhhhh
Confidence            99999999999999999999999999999999999999999986    8999999888 999999999999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCC-C-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGT-E-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~-~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      |+.+|++++|.++++++.+|+.+. + ++++++|+++|.||+|+|..||+||.+++|-|+++++++++++-++++..+++
T Consensus       238 rk~SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqgl~iddf~r~km~~t~~  317 (332)
T KOG1496|consen  238 RKLSSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQGLPIDDFSREKMDLTAK  317 (332)
T ss_pred             hhhhhhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcCcchhHHHHHhhhhhHH
Confidence            999999999999999999999998 4 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy9582         316 ELKNEILSISHLI  328 (329)
Q Consensus       316 ~i~~~~~~~~~~~  328 (329)
                      +|+++.+.+.++|
T Consensus       318 EL~eEkd~a~~~l  330 (332)
T KOG1496|consen  318 ELKEEKDLAYSCL  330 (332)
T ss_pred             HHHHhHHHHHHhh
Confidence            9999999988776

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=100.00  E-value=1.3e-60  Score=438.81  Aligned_cols=292  Identities=22%  Similarity=0.333  Sum_probs=255.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee---cCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH---ENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~---~~~~~al~   82 (329)
                      +||+||||+|+||+++|+.|+.+++.+     ||+|+|++      +++|.++||+|+...  ..++..   ++.|++++
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~------~a~g~alDL~~~~~~--~~i~~~~~~~~~y~~~~   67 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV------NTPGVAADLSHINTP--AKVTGYLGPEELKKALK   67 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC------ccceeehHhHhCCCc--ceEEEecCCCchHHhcC
Confidence            599999998999999999999999987     99999997      478999999998621  244432   33489999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH----HHHHHHHCCCCCCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN----TYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~----~~~~~~~~~~~~~~~i~~~  158 (329)
                      |||+||+++|.|++||++|.+++..|+++++++++.|++++ |++|+|++|||+|+|    ++++++.+ ++|++|++|.
T Consensus        68 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvDv~~~i~t~~~~~~s-~~p~~rviG~  145 (310)
T cd01337          68 GADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALILIISNPVNSTVPIAAEVLKKAG-VYDPKRLFGV  145 (310)
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchhhHHHHHHHHHHHhc-CCCHHHEEee
Confidence            99999999999999999999999999999999999999997 999999999999997    88888888 9999998888


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecC-CCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH-SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h-g~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |.|||+|+++++|+++|++|++|+.+ ||||| |++|||+||++++.    .++ .++   ..+++.+++++++++|++.
T Consensus       146 ~~LDs~R~~~~la~~l~v~~~~V~~~-v~GeHsGds~vp~~S~~~~~----~~~-~~~---~~~~i~~~v~~~g~~Ii~~  216 (310)
T cd01337         146 TTLDVVRANTFVAELLGLDPAKVNVP-VIGGHSGVTILPLLSQCQPP----FTF-DQE---EIEALTHRIQFGGDEVVKA  216 (310)
T ss_pred             echHHHHHHHHHHHHhCcCHHHEEEE-EEecCCCCceeccccccccc----ccC-CHH---HHHHHHHHHHHHHHHHHhC
Confidence            88999999999999999999999977 89999 89999999999763    232 222   3678999999999999997


Q ss_pred             c---CCccHHHHHHHHHHHHHHHHhCC---C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582         238 R---GASSAASAASAAIDHIKDWIFGT---E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK  308 (329)
Q Consensus       238 k---g~~~~~~~a~~~~~~l~~~i~~~---~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~  308 (329)
                      |   |+++|+++.+  +.+++++|++|   + .+++++ +.+|+ |. +|+|+|+||++ ++|++++++ + +|+++|++
T Consensus       217 k~gkg~t~~~~a~a--~~~iv~aIl~~~~~~~~~~~~s-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-l~~L~~~E~~  290 (310)
T cd01337         217 KAGAGSATLSMAYA--GARFANSLLRGLKGEKGVIECA-YVESD-VT-EAPFFATPVELGKNGVEKNLG-LGKLNDYEKK  290 (310)
T ss_pred             ccCCCCcchhHHHH--HHHHHHHHHHhcCCCcceEEEE-EEecc-CC-CceEEEEEEEEeCCeEEEEeC-CCCCCHHHHH
Confidence            4   7777776653  45899999844   5 677777 66665 65 79999999999 999999998 9 69999999


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q psy9582         309 KINLSIEELKNEILSISHL  327 (329)
Q Consensus       309 ~l~~s~~~i~~~~~~~~~~  327 (329)
                      +|++|++.|++.++...+|
T Consensus       291 ~l~~S~~~i~~~~~~g~~~  309 (310)
T cd01337         291 LLEAALPELKKNIEKGVDF  309 (310)
T ss_pred             HHHHHHHHHHHHHhhhccc
Confidence            9999999999999988876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=100.00  E-value=4.8e-60  Score=437.92  Aligned_cols=302  Identities=25%  Similarity=0.425  Sum_probs=270.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~~   83 (329)
                      +||+|+||+|.+|++++..|+..++.+     +|+|+|++  +..+++++.++|++|.....  ..+++.+++ ++++++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~--~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~   72 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRP--KSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAG   72 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECc--ccccccccccchhhhchhccCCCcEEEECCC-HHHhCC
Confidence            689999988999999999999999877     89999996  12478899999999864222  224555555 788999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|++++++|.+++..|+++++++++.|.+++ |++++|+++||+|++|+++++++ ++|++|++|+ |.||
T Consensus        73 aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npvd~~t~~~~~~~-g~~~~~viG~gt~LD  150 (309)
T cd05294          73 SDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVDVMTYKALKES-GFDKNRVFGLGTHLD  150 (309)
T ss_pred             CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHhc-CCCHHHEeeccchHH
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 7999996555 8999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS  242 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~  242 (329)
                      |+|+++++|++++++|++|+++ |+||||++++|+||+++++|+|+.+++..+ .+..+++.+++++++++|++.||+++
T Consensus       151 s~R~~~~la~~l~v~~~~v~~~-viGeHg~s~~~~~S~~~i~g~~~~~~~~~~-~~~~~~i~~~v~~~g~~i~~~kg~t~  228 (309)
T cd05294         151 SLRFKVAIAKHFNVHISEVHTR-IIGEHGDSMVPLISSTSIGGIPIKRFPEYK-DFDVEKIVETVKNAGQNIISLKGGSE  228 (309)
T ss_pred             HHHHHHHHHHHHCcChHHeEEE-EEecCCCceEeeeeecEECCEEHHHhhccc-HHHHHHHHHHHHHHHHHHHHhcCCch
Confidence            9999999999999999999988 789999999999999999999999886533 24567899999999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN  319 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  319 (329)
                      |+++.+  +.+++++|++|+ .++|++++++|+| |++ |+++|+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus       229 ~~~a~~--~~~ii~ail~~~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~~-l~l~~~E~~~l~~s~~~i~~  304 (309)
T cd05294         229 YGPASA--ISNLVRTIANDERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIVP-IEMDDDEREAFRKSAEIVKK  304 (309)
T ss_pred             hhHHHH--HHHHHHHHHCCCCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEeC-CCCCHHHHHHHHHHHHHHHH
Confidence            866653  348999999998 9999999999997 996 9999999999 999999999 99999999999999999998


Q ss_pred             HHHH
Q psy9582         320 EILS  323 (329)
Q Consensus       320 ~~~~  323 (329)
                      .++.
T Consensus       305 ~~~~  308 (309)
T cd05294         305 YTRE  308 (309)
T ss_pred             HHhc
Confidence            7753

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK06223 malate dehydrogenase; Reviewed

Probab=100.00  E-value=4.8e-58  Score=425.93  Aligned_cols=297  Identities=28%  Similarity=0.444  Sum_probs=265.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~   83 (329)
                      +||+|||| |.+|++++..++..++.      +|+|+|++    ++++++.++|+.+......  .+++.+++ ++++++
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~------ev~L~D~~----~~~~~~~~~dl~~~~~~~~~~~~i~~~~d-~~~~~~   70 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELG------DVVLFDIV----EGVPQGKALDIAEAAPVEGFDTKITGTND-YEDIAG   70 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCe------EEEEEECC----CchhHHHHHHHHhhhhhcCCCcEEEeCCC-HHHHCC
Confidence            58999999 99999999999988763      79999998    6778888999987643222  34444445 688999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|+++|++|.+++.+|++++++++++|++++ |++++|++|||+|++|+++++++ ++|++|++|. |.+|
T Consensus        71 aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d~~~~~~~~~s-~~~~~~viG~gt~ld  148 (307)
T PRK06223         71 SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVDAMTYVALKES-GFPKNRVIGMAGVLD  148 (307)
T ss_pred             CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHh-CCCcccEEEeCCCcH
Confidence            9999999999999999999999999999999999999998 99999999999999999999998 9999997665 6999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh--cCC
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI--RGA  240 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~--kg~  240 (329)
                      |+|+++++|++++++|++|+++ |+|+||++++|+||+++++|.|+.+++.++  | .+++.+.++++++++++.  ||+
T Consensus       149 s~r~~~~la~~l~v~~~~v~~~-viGehg~s~~p~~S~~~v~g~~~~~~~~~~--~-~~~l~~~v~~~~~~ii~~~~kg~  224 (307)
T PRK06223        149 SARFRTFIAEELNVSVKDVTAF-VLGGHGDSMVPLVRYSTVGGIPLEDLLSKE--K-LDEIVERTRKGGAEIVGLLKTGS  224 (307)
T ss_pred             HHHHHHHHHHHhCcChhhCccc-EEcCCCCcceEchhhCEECCEEHHHhCChH--H-HHHHHHHHHHHHHHHHhhcccCC
Confidence            9999999999999999999988 789999999999999999999999886443  3 578999999999999996  677


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      +.++.++  ++.++++++++|+ .++|++++++|+||+ +|++||+||++ ++|++++++ ++|+++|+++|++|+++|+
T Consensus       225 t~~~~A~--~~~~ii~ail~~~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~  300 (307)
T PRK06223        225 AYYAPAA--SIAEMVEAILKDKKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKIIE-LELDDEEKAAFDKSVEAVK  300 (307)
T ss_pred             hhHHHHH--HHHHHHHHHHcCCCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence            6666654  3458999999998 999999999999999 89999999999 999999998 9999999999999999999


Q ss_pred             HHHHHH
Q psy9582         319 NEILSI  324 (329)
Q Consensus       319 ~~~~~~  324 (329)
                      +.++.+
T Consensus       301 ~~~~~~  306 (307)
T PRK06223        301 KLIEAL  306 (307)
T ss_pred             HHHHhc
Confidence            988753

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=100.00  E-value=5.2e-58  Score=424.00  Aligned_cols=292  Identities=27%  Similarity=0.421  Sum_probs=262.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCCcc
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKDAN   85 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~aD   85 (329)
                      |+|||| |.+|++++..++..++.      +|+|+|++    ++++++.++|+.+......  .+++.+++ ++++++||
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~------eV~L~Di~----e~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dAD   68 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELG------DVVLLDIV----EGLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSD   68 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCc------EEEEEeCC----CcHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCC
Confidence            689999 99999999999988764      79999999    6677888888887642222  35555555 78999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHHH
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDHN  164 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~  164 (329)
                      +||+++|.|++++++|.+++.+|++++++++++|+++| |++++|++|||+|++++++++++ ++|++|++|+ |.+|++
T Consensus        69 iVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~-p~~~iIv~sNP~di~t~~~~~~s-~~~~~rviGlgt~lds~  146 (300)
T cd01339          69 VVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPLDVMTYVAYKAS-GFPRNRVIGMAGVLDSA  146 (300)
T ss_pred             EEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHh-CCCHHHEEEecchHHHH
Confidence            99999999999999999999999999999999999998 99999999999999999999998 9999997665 599999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhc--CCcc
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIR--GASS  242 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~k--g~~~  242 (329)
                      |+++++|++++++|++|+++ |+|+||++++|+||+++++|.|+.+++.++   .++++.+++++++++|++.|  |+++
T Consensus       147 r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~v~g~~~~~~~~~~---~~~~~~~~v~~~~~~ii~~k~~g~t~  222 (300)
T cd01339         147 RFRYFIAEELGVSVKDVQAM-VLGGHGDTMVPLPRYSTVGGIPLTELITKE---EIDEIVERTRNGGAEIVNLLKTGSAY  222 (300)
T ss_pred             HHHHHHHHHhCCCccceEEE-EEeCCCCcceecceecEECCEEHHHhcChH---HHHHHHHHHHHHHHHHHhhcCCCchh
Confidence            99999999999999999988 689999999999999999999999887654   35889999999999999976  7777


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      |++++  ++.++++++++|+ .++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|++.|++.
T Consensus       223 ~~~a~--~~~~i~~ail~~~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~~-l~l~~~E~~~l~~s~~~l~~~  298 (300)
T cd01339         223 YAPAA--AIAEMVEAILKDKKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKIIE-LDLTDEEKEAFDKSVESVKEL  298 (300)
T ss_pred             HHHHH--HHHHHHHHHHcCCCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence            77655  3458999999998 9999999999999995 9999999999 999999998 999999999999999999987


Q ss_pred             H
Q psy9582         321 I  321 (329)
Q Consensus       321 ~  321 (329)
                      +
T Consensus       299 ~  299 (300)
T cd01339         299 I  299 (300)
T ss_pred             h
Confidence            5

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PTZ00325 malate dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-58  Score=423.85  Aligned_cols=296  Identities=20%  Similarity=0.276  Sum_probs=260.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---cccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---PITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---~~~a   80 (329)
                      ++.||+||||+|+||+++++.|+..++..     ||+|+|++      ++++.++|++|...  ...+...++   .+++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~------~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~   73 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV------GAPGVAADLSHIDT--PAKVTGYADGELWEKA   73 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC------CCcccccchhhcCc--CceEEEecCCCchHHH
Confidence            45799999999999999999999888876     99999996      35788999999753  123433322   2899


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH----HHCCCCCCCcEE
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM----KSAPDLSYKNFT  156 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~----~~~~~~~~~~i~  156 (329)
                      ++|||+||+++|.+++++++|.+++..|+++++++++.|++++ |+++|+++|||+|.++++++    +.+ ++||+|++
T Consensus        74 l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~s-g~p~~~vi  151 (321)
T PTZ00325         74 LRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAG-VYDPRKLF  151 (321)
T ss_pred             hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhcc-CCChhhee
Confidence            9999999999999999999999999999999999999999996 99999999999999999995    667 99999987


Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC-ceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHH
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL-SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~-~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.+.|||+||++++|++++++|++|+++ ||||||+ ++||+||++   |.|+.    ++   ..+++.+++++++++|+
T Consensus       152 G~g~LDs~R~r~~la~~l~v~~~~V~~~-VlGeHGd~s~v~~~S~~---g~~l~----~~---~~~~i~~~v~~~g~~Ii  220 (321)
T PTZ00325        152 GVTTLDVVRARKFVAEALGMNPYDVNVP-VVGGHSGVTIVPLLSQT---GLSLP----EE---QVEQITHRVQVGGDEVV  220 (321)
T ss_pred             echhHHHHHHHHHHHHHhCcChhheEEE-EEeecCCcccccchhcc---CCCCC----HH---HHHHHHHHHHHHHHHHH
Confidence            7778999999999999999999999988 8999999 899999999   67763    22   35789999999999999


Q ss_pred             Hhc---CCccHHHHHHHHHHHHHHHHhC---CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHH
Q psy9582         236 SIR---GASSAASAASAAIDHIKDWIFG---TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSR  307 (329)
Q Consensus       236 ~~k---g~~~~~~~a~~~~~~l~~~i~~---~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~  307 (329)
                      +.|   |+|.|+++.+  +..++++|+.   |+ +++|++ +.+|+||. +|+|+|+||++ ++|++++++.++|+++|+
T Consensus       221 ~~k~~kg~t~~g~a~a--~~~i~~ail~~~~~~~~v~~~~-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~  296 (321)
T PTZ00325        221 KAKEGAGSATLSMAYA--AAEWSTSVLKALRGDKGIVECA-FVESDMRP-ECPFFSSPVELGKEGVERVLPIGPLNAYEE  296 (321)
T ss_pred             hcccCCCCchHHHHHH--HHHHHHHHHhhcCCCCCeEEEE-EEecCCCC-CCeEEEEEEEEcCCeeEEEcCCCCCCHHHH
Confidence            976   6777777653  4589999984   46 899985 88999997 89999999999 999999997579999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC
Q psy9582         308 KKINLSIEELKNEILSISHLIR  329 (329)
Q Consensus       308 ~~l~~s~~~i~~~~~~~~~~~~  329 (329)
                      ++|++|++.|++.++..+.|.+
T Consensus       297 ~~l~~S~~~i~~~~~~~~~~~~  318 (321)
T PTZ00325        297 ELLEAAVPDLKKNIEKGLEFAR  318 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998863

>PRK05086 malate dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-57  Score=416.43  Aligned_cols=294  Identities=19%  Similarity=0.294  Sum_probs=255.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--ecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--HENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--~~~~~~al~   82 (329)
                      |||+||||+|.+|+++++.|.. .+...     +++|+|++    +. .+++++|++|..  ....+..  .++.+++++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~-----el~L~d~~----~~-~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGS-----ELSLYDIA----PV-TPGVAVDLSHIP--TAVKIKGFSGEDPTPALE   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCcc-----EEEEEecC----CC-CcceehhhhcCC--CCceEEEeCCCCHHHHcC
Confidence            6899999999999999999865 45544     99999998    32 467888998742  1123333  345589999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH----HHCCCCCCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM----KSAPDLSYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~----~~~~~~~~~~i~~~  158 (329)
                      |+|+||+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+||++++    +++ ++|++|++|.
T Consensus        69 ~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~~~~~s-g~p~~rvig~  146 (312)
T PRK05086         69 GADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEVLKKAG-VYDKNKLFGV  146 (312)
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHHHHHhc-CCCHHHEEee
Confidence            99999999999999999999999999999999999999996 99999999999999999988    887 9999998888


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC-ceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL-SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~-~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |.|||+|+++++|++++++|++|+++ ||||||+ ++||+||++  +|.|+.    ++   ..+++.+++++++++|++.
T Consensus       147 ~~Lds~R~~~~ia~~l~~~~~~v~~~-v~GeHg~~s~~p~~S~~--~g~~l~----~~---~~~~i~~~v~~~g~~ii~~  216 (312)
T PRK05086        147 TTLDVIRSETFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV--PGVSFT----EQ---EVADLTKRIQNAGTEVVEA  216 (312)
T ss_pred             ecHHHHHHHHHHHHHhCCChhheEEE-EEEecCCCceecccccc--CCccCC----HH---HHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999999977 8999976 999999999  888873    22   3578999999999999998


Q ss_pred             c---CCccHHHHHHHHHHHHHHHHhC---CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582         238 R---GASSAASAASAAIDHIKDWIFG---TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK  308 (329)
Q Consensus       238 k---g~~~~~~~a~~~~~~l~~~i~~---~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~  308 (329)
                      |   |++.|+++.+  +.+++++|+.   |+ +++|++ +.+|+ |. +|+|||+||++ ++|++++++ + +|+++|++
T Consensus       217 k~~~g~t~~~~a~a--~~~~v~ai~~~~~~~~~v~~~~-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~  290 (312)
T PRK05086        217 KAGGGSATLSMGQA--AARFGLSLVRALQGEQGVVECA-YVEGD-GK-YARFFAQPVLLGKNGVEERLP-IGTLSAFEQN  290 (312)
T ss_pred             ccCCCCchhhHHHH--HHHHHHHHHhcCCCCCcEEEEE-EEecc-CC-cceEEEEEEEEcCCeeEEEcC-CCCCCHHHHH
Confidence            7   7777766653  4588889884   46 899976 77776 76 78999999999 999999999 7 99999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhC
Q psy9582         309 KINLSIEELKNEILSISHLIR  329 (329)
Q Consensus       309 ~l~~s~~~i~~~~~~~~~~~~  329 (329)
                      +|++|++.|++.++..++|++
T Consensus       291 ~l~~s~~~i~~~~~~g~~~~~  311 (312)
T PRK05086        291 ALEGMLDTLKKDIALGEEFVN  311 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999864

>PLN00106 malate dehydrogenase

Probab=100.00  E-value=8.9e-57  Score=415.55  Aligned_cols=290  Identities=21%  Similarity=0.296  Sum_probs=251.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~   83 (329)
                      +.||+||||+|+||+++++.|+.+++++     ||+|+|++    +  ++++++||+|+..... ..+..+++.+++++|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~----~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~   86 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIA----N--TPGVAADVSHINTPAQVRGFLGDDQLGDALKG   86 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecC----C--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCC
Confidence            4799999999999999999999999987     99999999    4  6788999999864321 112234455899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh----hHHHHHHHHCCCCCCCcEEEec
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN----TNTYITMKSAPDLSYKNFTAML  159 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~----~~~~~~~~~~~~~~~~~i~~~t  159 (329)
                      ||+||+++|.|+++|++|.+++..|.++++++++++++++ |+++++++|||+|    ++++.+++.+ ++||+|++|++
T Consensus        87 aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s-~~p~~~viG~~  164 (323)
T PLN00106         87 ADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAG-VYDPKKLFGVT  164 (323)
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcC-CCCcceEEEEe
Confidence            9999999999999999999999999999999999999997 9999999999999    8999999988 99999988888


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC-CceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh-
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI-  237 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg-~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~-  237 (329)
                      .||++|+++++|+++|++|.+|+++ |+|+|| ++|||+||++++.    .+ +.++   ..+++.+++++++++|++. 
T Consensus       165 ~LDs~Rl~~~lA~~lgv~~~~V~~~-ViGeHg~~s~vp~~S~~~~~----~~-~~~~---~~~~i~~~v~~~g~~Ii~~k  235 (323)
T PLN00106        165 TLDVVRANTFVAEKKGLDPADVDVP-VVGGHAGITILPLLSQATPK----VS-FTDE---EIEALTKRIQNGGTEVVEAK  235 (323)
T ss_pred             cchHHHHHHHHHHHhCCChhheEEE-EEEeCCCccEeeehhcceec----cc-CCHH---HHHHHHHHHHHHHHHHHhCc
Confidence            8999999999999999999999988 789996 5999999999653    22 2222   3578999999999999997 


Q ss_pred             --cCCccHHHHHHHHHHHHHHHHhC---CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHHH
Q psy9582         238 --RGASSAASAASAAIDHIKDWIFG---TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRKK  309 (329)
Q Consensus       238 --kg~~~~~~~a~~~~~~l~~~i~~---~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~~  309 (329)
                        ||++.|+++.+  +.+++++|+.   |+ .++||| +.+|+|  ..++|||+||++ ++|++++++ + +|+++|+++
T Consensus       236 ~~kg~t~~~~a~a--~~~ii~ail~~~~~~~~v~~~s-~~~~~~--~~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~  309 (323)
T PLN00106        236 AGAGSATLSMAYA--AARFADACLRGLNGEADVVECS-YVQSEV--TELPFFASKVRLGRNGVEEVLG-LGPLSEYEQKG  309 (323)
T ss_pred             cCCCCchHHHHHH--HHHHHHHHHhccCCCceEEEEE-EECccc--CCceEEEEEEEEcCCeeEEEcC-CCCCCHHHHHH
Confidence              47777766653  4588999987   46 899999 556665  223999999999 999999999 7 999999999


Q ss_pred             HHHHHHHHHHHHH
Q psy9582         310 INLSIEELKNEIL  322 (329)
Q Consensus       310 l~~s~~~i~~~~~  322 (329)
                      |++|++.|++.++
T Consensus       310 l~~S~~~i~~~~~  322 (323)
T PLN00106        310 LEALKPELKASIE  322 (323)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998875

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=100.00  E-value=3e-53  Score=385.35  Aligned_cols=257  Identities=30%  Similarity=0.500  Sum_probs=234.5

Q ss_pred             EEEEcCCCchHHHHHHHHHhCC--CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           8 ISITGAAGQIGYNIIFRIANGD--LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~--~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      |+||||+|.+|+++++.|+..+  ...     +|+|+|++    ++++++.++|++|..... ..+++.++|.+++++||
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~-----el~L~D~~----~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAI-----ELVLYDID----EEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcce-----EEEEEeCC----cccchHHHHHHHHhhhhccCcEEEECCchHHHhCCC
Confidence            6899998999999999999988  444     99999999    788999999999876444 35777777879999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHN  164 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~  164 (329)
                      |+||+++|.++++|++|.+++.+|++++++++++|+++| |++|+|++|||+|++|+++++++ ++|++|++|.|.+|+.
T Consensus        72 DiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~d~~t~~~~~~s-g~~~~kviG~~~ld~~  149 (263)
T cd00650          72 DVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPVDIITYLVWRYS-GLPKEKVIGLGTLDPI  149 (263)
T ss_pred             CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHh-CCCchhEEEeecchHH
Confidence            999999999999999999999999999999999999998 99999999999999999999999 9999997776559999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccHH
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAA  244 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~~  244 (329)
                      |+++++|+++++++++|+.+ |||+||++++|+||+++                                          
T Consensus       150 r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~------------------------------------------  186 (263)
T cd00650         150 RFRRILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR------------------------------------------  186 (263)
T ss_pred             HHHHHHHHHhCCCccceEEE-EEEcCCCceEeccccch------------------------------------------
Confidence            99999999999999999966 89999999999999974                                          


Q ss_pred             HHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy9582         245 SAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI  321 (329)
Q Consensus       245 ~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~  321 (329)
                      ++. + +.+++++|.+|+ .++|++++++|+||+|+|++||+||++ ++|++++++ ++|+++|+++|+++++.++..+
T Consensus       187 ~a~-~-~~~ii~ai~~~~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~-~~l~~~e~~~l~~s~~~~~~~~  262 (263)
T cd00650         187 IAT-S-IADLIRSLLNDEGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIE-VGLTDFELEKLQKSADTLKKEL  262 (263)
T ss_pred             HHH-H-HHHHHHHHHcCCCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence            122 2 348899999998 999999999999998899999999999 999999999 9999999999999999999765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1494|consensus

Probab=100.00  E-value=1.5e-48  Score=340.20  Aligned_cols=300  Identities=23%  Similarity=0.334  Sum_probs=251.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
                      +..||+|+||+|.||+.+..+|..+.+.+     ++.|||+.      ...|.+.|++|..... ...+....+++++++
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~------~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~   95 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIA------NTPGVAADLSHINTNSSVVGFTGADGLENALK   95 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeecc------cCCcccccccccCCCCceeccCChhHHHHHhc
Confidence            35799999999999999999999999988     99999998      2578999999986532 233444457889999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH---HCCCCCCCcEEEec
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK---SAPDLSYKNFTAML  159 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~---~~~~~~~~~i~~~t  159 (329)
                      +||+|||.||+||||||+|+|++..|+-++++++..+.++| |+|.+.++|||+|...+++.+   ..+.++|+|+.|+|
T Consensus        96 ~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVT  174 (345)
T KOG1494|consen   96 GADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVT  174 (345)
T ss_pred             CCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeecCcccccchHHHHHHHHcCCCCccceecee
Confidence            99999999999999999999999999999999999999999 999999999999987776654   35579999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCC-CCeeEEEEEecCC-CceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         160 RLDHNRAIAKLASKLNEPV-SSIKKVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~-~~v~~~~v~G~hg-~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      .||..|+++++++.++++| ++++.. |+|+|. .+.+|++|++..    ...+- ++   ..+.++.++++.|.||++.
T Consensus       175 tLDvVRA~tFv~~~~~~~p~~~v~VP-VIGGHaG~TIlPLlSQ~~p----~~~~~-~~---~~~~Lt~RiQ~gGtEVV~A  245 (345)
T KOG1494|consen  175 TLDVVRANTFVAEVLNLDPAEDVDVP-VIGGHAGITIIPLLSQCKP----PFRFT-DD---EIEALTHRIQNGGTEVVKA  245 (345)
T ss_pred             hhhhhhHHHHHHHHhCCCchhcCCcc-eecCcCCceEeeecccCCC----cccCC-HH---HHHHHHHHHHhCCceEEEe
Confidence            9999999999999999999 557755 788885 799999999974    23222 22   3577888999999999998


Q ss_pred             c-CCccH-HHHHHHHHH---HHHHHHhCCCcEEEEE-eecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582         238 R-GASSA-ASAASAAID---HIKDWIFGTENWVTMG-IPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI  310 (329)
Q Consensus       238 k-g~~~~-~~~a~~~~~---~l~~~i~~~~~i~~~~-v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l  310 (329)
                      | |.+|+ +++|+|.+.   .+++.+.+++.+..|+ |.++ .+++|   ||+.|+++ ++|++++....+|+++|++.|
T Consensus       246 KaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~-~~~~~---fFaspv~Lg~~Gv~~v~~l~~lsd~E~~~l  321 (345)
T KOG1494|consen  246 KAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASP-VTELP---FFATPVTLGKKGVEEVLGLGKLSDYEEKAL  321 (345)
T ss_pred             ccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEecc-ccCcc---ceeceEEecCCceeeecCCCccCHHHHHHH
Confidence            8 66666 777766543   3455556666555565 4554 35664   99999999 999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q psy9582         311 NLSIEELKNEILSISHLI  328 (329)
Q Consensus       311 ~~s~~~i~~~~~~~~~~~  328 (329)
                      +.+..+||+.|+...+|.
T Consensus       322 ~~~~~eLk~sI~KGv~F~  339 (345)
T KOG1494|consen  322 EAAKPELKKSIEKGVTFV  339 (345)
T ss_pred             HHHHHHHHHHHHhhHHHH
Confidence            999999999999998874

>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=2.7e-36  Score=257.53  Aligned_cols=166  Identities=31%  Similarity=0.389  Sum_probs=149.8

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC---ccchhhhHHHHHhhhhHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---SFWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~---~~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.||++|+++++|+++|++|++++++ ||||||+++||+||+++++|.|+.++.+..   +.+..+++.+.+++++++|+
T Consensus         1 T~LDs~R~~~~la~~l~v~~~~v~~~-ViGeHg~s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii   79 (174)
T PF02866_consen    1 TMLDSARFRYFLAEKLGVNPSSVNAY-VIGEHGDSQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII   79 (174)
T ss_dssp             THHHHHHHHHHHHHHHTSGGGGEEEE-EEBSSSTTEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCccceEEE-EEecCCcceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence            68999999999999999999999988 899999999999999999999998776442   14567899999999999999


Q ss_pred             Hhc-CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCC-eEEEEeEEE-cCccEEeccCCCCCHHHHHHHH
Q psy9582         236 SIR-GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKD-IIFGFPVKI-KNSKYKIIQNLEIDKFSRKKIN  311 (329)
Q Consensus       236 ~~k-g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~-~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~  311 (329)
                      +.| |.++|++|. + +.+++++|+.|. .++|+|++++|+||++.+ +|||+||++ ++|+++++++++|+++|+++|+
T Consensus        80 ~~k~g~t~~s~A~-a-~~~~v~ail~~~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~  157 (174)
T PF02866_consen   80 KAKGGSTSYSIAA-A-AARIVEAILKDERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQEKLK  157 (174)
T ss_dssp             HHHSSSCHHHHHH-H-HHHHHHHHHTTHTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHHHHH
T ss_pred             eeccccCcCCHHH-H-HHHHHHHHhhcccccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHHHHH
Confidence            999 666665544 3 458999999997 999999999999999655 999999999 9999999987999999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q psy9582         312 LSIEELKNEILSISHL  327 (329)
Q Consensus       312 ~s~~~i~~~~~~~~~~  327 (329)
                      +|++.|++.++.+++|
T Consensus       158 ~sa~~l~~~i~~~~~f  173 (174)
T PF02866_consen  158 ESAKELKKEIEKGLEF  173 (174)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999999887

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4

Probab=100.00  E-value=4e-32  Score=260.29  Aligned_cols=294  Identities=16%  Similarity=0.175  Sum_probs=206.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCC-C-ceEEEEecCCcccccchhhhHhhhhhccc---CCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQ-P-IILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~-~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~~~~~~~a   80 (329)
                      +||+||||    ||+.++.|+..-+..+++ + .||+|+|++    +++++- +..+.....   ....++..|+|.++|
T Consensus         1 ~KI~iIGg----GS~~tp~li~~l~~~~~~l~~~ei~L~Did----~~Rl~~-v~~l~~~~~~~~g~~~~v~~ttD~~~A   71 (425)
T cd05197           1 VKIAIIGG----GSSFTPELVSGLLKTPEELPISEVTLYDID----EERLDI-ILTIAKRYVEEVGADIKFEKTMDLEDA   71 (425)
T ss_pred             CEEEEECC----chHhHHHHHHHHHcChhhCCCCEEEEEcCC----HHHHHH-HHHHHHHHHHhhCCCeEEEEeCCHHHH
Confidence            59999999    444555555432222222 3 399999999    556653 223322111   122478889999999


Q ss_pred             cCCccEEEEe---CCC---------CCCCC---C-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          81 FKDANIAILI---GSF---------PRKSN---M-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        81 l~~aDiVi~~---~g~---------~~~~g---~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                      ++||||||.+   +|.         |.+.|   +     -......+|+++++++++.|+++| |+||+|++|||++++|
T Consensus        72 l~gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~-P~a~lin~TNP~di~t  150 (425)
T cd05197          72 IIDADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLS-PDAWYLNFTNPAGEVT  150 (425)
T ss_pred             hCCCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhC-CCcEEEecCChHHHHH
Confidence            9999999996   332         22332   1     255667899999999999999998 9999999999999999


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehhhhhc----cC
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMIN----NN  215 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~----~~  215 (329)
                      +++++++   |+.|++|.|.. +.|+++.+|+.+|+++++|+.+ ++| |||    |+||+++++|+|+...+.    +.
T Consensus       151 ~a~~~~~---p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~-v~GlnHg----~~~s~~~~~G~~l~p~l~~~~~~~  221 (425)
T cd05197         151 EAVRRYV---PPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQ-YAGLNHG----IWLNRVRYNGGDVTPKLDEWVEEK  221 (425)
T ss_pred             HHHHHhC---CCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEE-EEeccCe----EeeEeEEECCeecHHHHHHHHhcc
Confidence            9999986   56788787765 8999999999999999999988 789 996    999999999988762221    10


Q ss_pred             c--------------cc--------------------hhhhHHH----H----------HhhhhH---HHH---------
Q psy9582         216 S--------------FW--------------------NKNVFLP----A----------ISRRGE---EII---------  235 (329)
Q Consensus       216 ~--------------~~--------------------~~~~l~~----~----------v~~~~~---~i~---------  235 (329)
                      .              .|                    ..++..+    +          +.+...   +..         
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~  301 (425)
T cd05197         222 SKDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSV  301 (425)
T ss_pred             CccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCCh
Confidence            0              00                    0000000    0          011111   111         


Q ss_pred             ---HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHH
Q psy9582         236 ---SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKK  309 (329)
Q Consensus       236 ---~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~  309 (329)
                         ..++. .+ ++ -.++ .++++|.+|+ .++.++|.++|. -++|+|+++++||++ ++|+.++-- .+|++..+++
T Consensus       302 ~~~~~r~~-~~-~~-e~a~-~ii~ai~~~~~~~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~L  376 (425)
T cd05197         302 VELIKRGG-RK-YS-EAAI-PLIRALLNDNGARFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGL  376 (425)
T ss_pred             hhhhhcCC-cc-cH-HHHH-HHHHHHHcCCCeEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHH
Confidence               11111 11 11 1123 8999999998 999999999998 699999999999999 999999876 8999988887


Q ss_pred             HHHHHHHHHHHHHH
Q psy9582         310 INLSIEELKNEILS  323 (329)
Q Consensus       310 l~~s~~~i~~~~~~  323 (329)
                      ++.-...-+-.+++
T Consensus       377 i~~~~~~e~l~veA  390 (425)
T cd05197         377 LRQRKMRERLALEA  390 (425)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77644444334443

Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=2.2e-33  Score=230.98  Aligned_cols=141  Identities=28%  Similarity=0.479  Sum_probs=131.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+||||+|.+|+++++.|+.+++.+     ||+|+|++    +++++|.++|++|....+..+..++.+.+++++|||
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~----~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aD   71 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDIN----EDKAEGEALDLSHASAPLPSPVRITSGDYEALKDAD   71 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESS----HHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTES
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccC----cccceeeehhhhhhhhhccccccccccccccccccc
Confidence            699999999999999999999999987     99999999    778999999999987655566777778899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      +||+++|.++++|++|.+++..|+++++++++++.+++ |+++++++|||+|++|+++++++ ++|++|++|
T Consensus        72 ivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNPvd~~t~~~~~~s-~~~~~kviG  141 (141)
T PF00056_consen   72 IVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNPVDVMTYVAQKYS-GFPPNKVIG  141 (141)
T ss_dssp             EEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSSHHHHHHHHHHHH-TSSGGGEEE
T ss_pred             EEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCcHHHHHHHHHHhh-CcCcccCcC
Confidence            99999999999999999999999999999999999998 99999999999999999999999 999999765

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK15076 alpha-galactosidase; Provisional

Probab=100.00  E-value=5e-31  Score=253.65  Aligned_cols=294  Identities=14%  Similarity=0.124  Sum_probs=207.1

Q ss_pred             CEEEEEcCCCchHHHHHH--HHH-hCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhccc--CCccceEeecCccc
Q psy9582           6 VRISITGAAGQIGYNIIF--RIA-NGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCIF--PLLVDVSVHENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~--~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~~--~~~~~i~~~~~~~~   79 (329)
                      +||+|||| |++|.+.+.  .++ ..++.+    .||+|+|++    +++++ +... +++...  ....+++.++|.++
T Consensus         2 ~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~----~evvLvDid----~er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~e   71 (431)
T PRK15076          2 PKITFIGA-GSTVFTKNLLGDILSVPALRD----AEIALMDID----PERLEESEIV-ARKLAESLGASAKITATTDRRE   71 (431)
T ss_pred             cEEEEECC-CHHHhHHHHHHHHhhCccCCC----CEEEEECCC----HHHHHHHHHH-HHHHHHhcCCCeEEEEECCHHH
Confidence            58999999 999988766  665 234332    189999999    66666 3333 444321  12246777888899


Q ss_pred             ccCCccEEEEeCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          80 AFKDANIAILIGSFP-RKSN--------------MERSEL--------LAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        80 al~~aDiVi~~~g~~-~~~g--------------~~~~~~--------~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +++||||||++++.+ ++++              ++|.+.        +.+|++++++++++|+++| |+||+|++|||+
T Consensus        72 al~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-p~a~iin~tNP~  150 (431)
T PRK15076         72 ALQGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-PDALLLNYVNPM  150 (431)
T ss_pred             HhCCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC-CCeEEEEcCChH
Confidence            999999999998775 3433              445555        8999999999999999998 999999999999


Q ss_pred             hhHHHHHHHHCCCCCCCcEEEe--chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhcc
Q psy9582         137 NTNTYITMKSAPDLSYKNFTAM--LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINN  214 (329)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~i~~~--t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~  214 (329)
                      +++|++++    ++|+.|++|.  +.+|+.   +.+|+.+|+++++|+..+..-||    +.|+.+.+.+|..+...+.+
T Consensus       151 divt~~~~----~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH----~~W~~~~~~~G~D~~p~l~~  219 (431)
T PRK15076        151 AMNTWAMN----RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINH----MAWYLELERKGEDLYPELRA  219 (431)
T ss_pred             HHHHHHHh----cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecc----hhhheeeeECCcchHHHHHH
Confidence            99999997    4456786665  577764   88999999999999988543399    88888888776554311100


Q ss_pred             ----------C-------------c-----------cc--h--hhhHHHHHh-------hhh-------HHHH-HhcCCc
Q psy9582         215 ----------N-------------S-----------FW--N--KNVFLPAIS-------RRG-------EEII-SIRGAS  241 (329)
Q Consensus       215 ----------~-------------~-----------~~--~--~~~l~~~v~-------~~~-------~~i~-~~kg~~  241 (329)
                                +             |           .|  .  .++..+...       ++.       .+.. +.++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (431)
T PRK15076        220 AAAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAE  299 (431)
T ss_pred             HHhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCC
Confidence                      0             0           01  1  222222211       011       1111 122221


Q ss_pred             cHHH--HHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         242 SAAS--AASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       242 ~~~~--~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      ++..  .+-.++ .++++|.+|. .++.++|.++|. -++|+|.++++||.+ ++|+.++.- .+|++..+++++.-...
T Consensus       300 ~~~~~~~~e~a~-~ii~ai~~~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~  377 (431)
T PRK15076        300 RIEIKRSREYAS-TIIEAIETGEPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINV  377 (431)
T ss_pred             ccccccchHHHH-HHHHHHhcCCceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHH
Confidence            1100  112234 8999999998 999999999998 699999999999999 999999987 89999999887765444


Q ss_pred             HHHHHHH
Q psy9582         317 LKNEILS  323 (329)
Q Consensus       317 i~~~~~~  323 (329)
                      -+-.+++
T Consensus       378 e~l~veA  384 (431)
T PRK15076        378 QELTVEA  384 (431)
T ss_pred             HHHHHHH
Confidence            4434443

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase

Probab=100.00  E-value=8.1e-31  Score=250.88  Aligned_cols=293  Identities=14%  Similarity=0.156  Sum_probs=201.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCC-C-ceEEEEecCCcccccchhhhH---hhhhhcccCCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQ-P-IILQLLEASNKKSQKAIKGVI---MEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~-~ei~L~D~~~~~~~~~~~~~~---~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      +||+|||| |+   +.++.|+..-+...++ + .||+|+|+++   +++++...   ..+.+.. .....+..|+|.++|
T Consensus         1 ~KI~iIGa-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~---~~rl~~v~~~~~~~~~~~-~~~~~v~~t~d~~~a   72 (419)
T cd05296           1 MKLTIIGG-GS---SYTPELIEGLIRRYEELPVTELVLVDIDE---EEKLEIVGALAKRMVKKA-GLPIKVHLTTDRREA   72 (419)
T ss_pred             CEEEEECC-ch---HhHHHHHHHHHhccccCCCCEEEEecCCh---HHHHHHHHHHHHHHHHhh-CCCeEEEEeCCHHHH
Confidence            69999999 44   3444443321111111 2 2999999992   24454322   2222211 122478889999999


Q ss_pred             cCCccEEEEeCCCCCCCCCC--------------------HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          81 FKDANIAILIGSFPRKSNME--------------------RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~--------------------~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                      ++||||||++.+....++.+                    ......+|++++++++++|+++| |+||+|++|||++++|
T Consensus        73 l~gadfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~-Pda~lin~TNP~~ivt  151 (419)
T cd05296          73 LEGADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA-PDAWLINFTNPAGIVT  151 (419)
T ss_pred             hCCCCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC-CCeEEEEecCHHHHHH
Confidence            99999999987655433332                    33457899999999999999998 9999999999999999


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehhhhhcc-----
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMINN-----  214 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~~-----  214 (329)
                      +++++.+    +.|++|.|..+ .|+++.+|+.+|+++++++.+ ++| ||    +.|+.+.+.+|..+..-+.+     
T Consensus       152 ~a~~k~~----~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~-v~GlNH----~~w~~~~~~~G~D~~p~l~~~~~~~  221 (419)
T cd05296         152 EAVLRHT----GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFID-YAGLNH----LGWLRRVLLDGEDVLPELLEDLAAL  221 (419)
T ss_pred             HHHHHhc----cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEE-EEeccc----ceeeeeeeECCcccHHHHHHHhhhc
Confidence            9999886    46788887664 899999999999999999987 789 99    88888888777655421100     


Q ss_pred             ------C-------------c-c----c-hhhhHHHHHh----hhh-------HHHH---------------HhcCCccH
Q psy9582         215 ------N-------------S-F----W-NKNVFLPAIS----RRG-------EEII---------------SIRGASSA  243 (329)
Q Consensus       215 ------~-------------~-~----~-~~~~l~~~v~----~~~-------~~i~---------------~~kg~~~~  243 (329)
                            .             | .    | ..++..++..    .++       .+++               ..++++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y  301 (419)
T cd05296         222 LSFEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGY  301 (419)
T ss_pred             cccccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcch
Confidence                  0             0 0    0 1122222211    011       1111               11121111


Q ss_pred             HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         244 ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       244 ~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      .   -.++ .++++|.+|+ .++.++|.++|. -++|+|+++++||.+ ++|+.++-- .+|++..+++++.....=+-.
T Consensus       302 ~---e~a~-~ii~ai~~~~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l~  376 (419)
T cd05296         302 S---EAAL-ALISAIYNDKGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERLT  376 (419)
T ss_pred             H---HHHH-HHHHHHhcCCCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHHH
Confidence            1   1123 8999999998 999999999998 699999999999999 999999876 899999888766544333333


Q ss_pred             HH
Q psy9582         321 IL  322 (329)
Q Consensus       321 ~~  322 (329)
                      ++
T Consensus       377 ve  378 (419)
T cd05296         377 IE  378 (419)
T ss_pred             HH
Confidence            33

Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases

Probab=99.97  E-value=1.1e-29  Score=243.82  Aligned_cols=298  Identities=16%  Similarity=0.189  Sum_probs=202.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCC-C-ceEEEEecCCcccccchhhhHhhhhhccc---CCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQ-P-IILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~-~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~~~~~~~a   80 (329)
                      +||+||||    ||+.++.|+..-+..+++ + .||+|+|++    +++++. +..+.....   ....+++.|+|.++|
T Consensus         1 ~KI~iIGa----GS~~tp~li~~l~~~~~~l~~~ei~L~DId----~~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eA   71 (437)
T cd05298           1 FKIVIAGG----GSTYTPGIVKSLLDRKEDFPLRELVLYDID----AERQEK-VAEAVKILFKENYPEIKFVYTTDPEEA   71 (437)
T ss_pred             CeEEEECC----cHHHHHHHHHHHHhCcccCCCCEEEEECCC----HHHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHH
Confidence            69999999    444555554432211122 2 399999999    666653 333332211   223478889999999


Q ss_pred             cCCccEEEEe---CCC---------CCCCCC--------CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          81 FKDANIAILI---GSF---------PRKSNM--------ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        81 l~~aDiVi~~---~g~---------~~~~g~--------~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                      ++||||||.+   +|.         |.|.|.        -......||+++++++++.|+++| ||||+|++|||++++|
T Consensus        72 l~gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~-pda~lin~tNP~~~vt  150 (437)
T cd05298          72 FTDADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYS-PDAWILNYSNPAAIVA  150 (437)
T ss_pred             hCCCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHH
Confidence            9999999996   332         223331        245667899999999999999998 9999999999999999


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeec-ceehhhhhc----cC
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN-GVLIRDMIN----NN  215 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~-~~p~~~~~~----~~  215 (329)
                      +++++..   |..|++|+|.-. ..+...+|+.+|+++++++..+..-||    +.|+.+.+.+ |..+...+.    +.
T Consensus       151 ~~~~~~~---~~~kviGlC~~~-~~~~~~la~~lg~~~~~v~~~~~GlNH----~~w~~~~~~~~G~D~~p~l~e~~~~~  222 (437)
T cd05298         151 EALRRLF---PNARILNICDMP-IAIMDSMAAILGLDRKDLEPDYFGLNH----FGWFTKIYDKQGEDLLPKLREHVKEN  222 (437)
T ss_pred             HHHHHHC---CCCCEEEECCcH-HHHHHHHHHHhCCCHHHceEEEEeecc----hhhhhheEECCCCchHHHHHHHHhcc
Confidence            9999874   556899999765 357889999999999999987543388    7777777777 665542211    10


Q ss_pred             c-------------cch---------------------------hhhHHHHHh-----------hhhHHHH---H---hc
Q psy9582         216 S-------------FWN---------------------------KNVFLPAIS-----------RRGEEII---S---IR  238 (329)
Q Consensus       216 ~-------------~~~---------------------------~~~l~~~v~-----------~~~~~i~---~---~k  238 (329)
                      +             .|.                           .+++.++..           ....+++   +   ..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~  302 (437)
T cd05298         223 GYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIET  302 (437)
T ss_pred             CCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhc
Confidence            0             010                           111111111           0111110   0   00


Q ss_pred             CC---ccHHH--HHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582         239 GA---SSAAS--AASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI  310 (329)
Q Consensus       239 g~---~~~~~--~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l  310 (329)
                      +.   .++..  .+. .+..++++|.+|+ .++++|++++|+| ++|+|+++|+||++ ++|+.++.- .+|++...+++
T Consensus       303 ~~~~~~~~~~~~ya~-~a~~ii~aI~~d~~~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~  380 (437)
T cd05298         303 GTAEGSTFHVDVHGE-YIVDLAASIAYNTKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLM  380 (437)
T ss_pred             CChhhhhhhccchHH-HHHHHHHHHHcCCCeEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHH
Confidence            10   01111  122 2348999999998 9999999999998 58899999999999 999999987 89999988887


Q ss_pred             HHHHHHHHHHHHH
Q psy9582         311 NLSIEELKNEILS  323 (329)
Q Consensus       311 ~~s~~~i~~~~~~  323 (329)
                      +.-...-+-.+++
T Consensus       381 ~~~~~~e~l~veA  393 (437)
T cd05298         381 EQQVAYEKLLVEA  393 (437)
T ss_pred             HHHHHHHHHHHHH
Confidence            7654444444443

Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases

Probab=99.97  E-value=2.5e-28  Score=235.34  Aligned_cols=295  Identities=14%  Similarity=0.131  Sum_probs=208.7

Q ss_pred             CEEEEEcCCCchHHHHHH--HHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIF--RIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~--~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~a   80 (329)
                      +||+|||| |++|++++.  .++.. .+.+    .+|+|+|++    +++++....++.+...  ....+++.++|.+++
T Consensus         1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g----~eV~L~Did----~e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~ea   71 (423)
T cd05297           1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSG----STIALMDID----EERLETVEILAKKIVEELGAPLKIEATTDRREA   71 (423)
T ss_pred             CeEEEECC-ChHHhHHHHHHHHhcCCCCCC----CEEEEECCC----HHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHH
Confidence            58999999 999998776  45533 3322    189999999    7777777666655431  122578888998999


Q ss_pred             cCCccEEEEeCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          81 FKDANIAILIGSFPRKSNMER----------------------SELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~----------------------~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++|||+||++.+....++.++                      .....+|++++.++++.++++| |++|++++|||+++
T Consensus        72 l~~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~-p~a~~i~~tNPv~i  150 (423)
T cd05297          72 LDGADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELC-PDAWLLNYANPMAE  150 (423)
T ss_pred             hcCCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHC-CCCEEEEcCChHHH
Confidence            999999999876544333222                      4556789999999999999998 89999999999999


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehhhhhcc---
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMINN---  214 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~~---  214 (329)
                      +|+++++.+ +   .|++|.|.. +.++++.+|+.+++++++|+.. ++| ||    +.||.+.+.+|..+...+.+   
T Consensus       151 ~t~~~~k~~-~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~-~~GlNH----~~w~~~~~~~G~d~~p~l~~~~~  220 (423)
T cd05297         151 LTWALNRYT-P---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQ-VAGINH----MAWLLKFEYNGEDLYPLLDEWIE  220 (423)
T ss_pred             HHHHHHHhC-C---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEE-EEeecc----HhhhhhheECCcchHHHHHHHHh
Confidence            999999998 4   467776644 6789999999999999999988 556 99    77777777776554311111   


Q ss_pred             C----------------------c--------cc-----hhhhHHHHH--------------hhhhHHHHHhcCC-c---
Q psy9582         215 N----------------------S--------FW-----NKNVFLPAI--------------SRRGEEIISIRGA-S---  241 (329)
Q Consensus       215 ~----------------------~--------~~-----~~~~l~~~v--------------~~~~~~i~~~kg~-~---  241 (329)
                      +                      |        +|     ..++.....              .+.-+.-....+. .   
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (423)
T cd05297         221 EGSEEWDQLSPVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDK  300 (423)
T ss_pred             ccCccchhcccchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcc
Confidence            0                      0        00     000111100              0000000000000 0   


Q ss_pred             --cH---HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         242 --SA---ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       242 --~~---~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                        .+   .++-. ++ .++++|.+|+ .++.++|.++|. -++|+|+++++||.+ ++|+.++-- .+|++..+++++.-
T Consensus       301 ~~~~~~~~~~e~-a~-~ii~ai~~~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~  377 (423)
T cd05297         301 EELDPVKRSGEY-AS-PIIEALVTGKPRRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPR  377 (423)
T ss_pred             hhccccccchHH-HH-HHHHHHhcCCceEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHH
Confidence              01   11222 33 8999999998 999999999998 799999999999999 999999987 89999988887765


Q ss_pred             HHHHHHHHHH
Q psy9582         314 IEELKNEILS  323 (329)
Q Consensus       314 ~~~i~~~~~~  323 (329)
                      ...-+-.+++
T Consensus       378 ~~~e~l~veA  387 (423)
T cd05297         378 INVQELAVEA  387 (423)
T ss_pred             HHHHHHHHHH
Confidence            5544444443

linked to 3D####ucture

>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]

Probab=99.96  E-value=6.7e-28  Score=226.72  Aligned_cols=297  Identities=17%  Similarity=0.209  Sum_probs=205.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCC-Cc-eEEEEecCCcccccchhhhHhhhhhccc---CCccceEeecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQ-PI-ILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~~-ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~~~~~~   78 (329)
                      ++.||+||||    ||+..+.++.+.+...++ |. ||+|+|++    +++++ ...++.+...   ....++..++|.+
T Consensus         2 ~~~KI~iIGg----GSt~tp~~v~g~l~~~e~l~~~el~L~Did----~~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~   72 (442)
T COG1486           2 KKFKIVIIGG----GSTYTPKLLLGDLARTEELPVRELALYDID----EERLK-IIAILAKKLVEEAGAPVKVEATTDRR   72 (442)
T ss_pred             CcceEEEECC----CccccHHHHHHHHhcCccCCcceEEEEeCC----HHHHH-HHHHHHHHHHHhhCCCeEEEEecCHH
Confidence            3479999999    555555555555544344 54 99999999    66665 3334433221   1224678899999


Q ss_pred             cccCCccEEEEeC---C---------CCCCCC---C-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          79 TAFKDANIAILIG---S---------FPRKSN---M-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        79 ~al~~aDiVi~~~---g---------~~~~~g---~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      +||+|||||+.+.   |         .|.|.|   +     .......|+++++.+|++.|+++| |+||++++|||+.+
T Consensus        73 eAl~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~-P~Aw~lNytNP~~~  151 (442)
T COG1486          73 EALEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVC-PNAWMLNYTNPAAI  151 (442)
T ss_pred             HHhcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhC-CCceEEeccChHHH
Confidence            9999999999863   3         233443   1     244556799999999999999998 99999999999999


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCC-CCeeEEEEEe-cCCCceeecccCCeecceehhhhhcc--
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPV-SSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMINN--  214 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~-~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~~--  214 (329)
                      +|+++.+++|   .-|++|+|... .-....+|+.|++.+ ++++.. +.| ||    +.||.+.+.+|.++..-+.+  
T Consensus       152 vTeAv~r~~~---~~K~VGlCh~~-~g~~~~lAe~L~~~~~~~l~~~-~aGlNH----~~w~~~~~~~G~d~~p~l~~~~  222 (442)
T COG1486         152 VTEAVRRLYP---KIKIVGLCHGP-IGIAMELAEVLGLEPREDLRYR-VAGLNH----MVWILRVRDDGEDLYPELLEAL  222 (442)
T ss_pred             HHHHHHHhCC---CCcEEeeCCch-HHHHHHHHHHhCCCchhceeEE-Eeechh----hhhhhHhhhcCccchHHHHHHH
Confidence            9999999873   23789998754 467889999999975 999976 456 88    66666666665433210000  


Q ss_pred             --C-------------ccc---------------------hhhhHH--------------HHHhhhhHHHH---------
Q psy9582         215 --N-------------SFW---------------------NKNVFL--------------PAISRRGEEII---------  235 (329)
Q Consensus       215 --~-------------~~~---------------------~~~~l~--------------~~v~~~~~~i~---------  235 (329)
                        .             +.|                     ....+.              +++.++..+.+         
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~  302 (442)
T COG1486         223 EEGGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELK  302 (442)
T ss_pred             hccccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhh
Confidence              0             000                     000111              11222211111         


Q ss_pred             ------HhcCCc-cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHH
Q psy9582         236 ------SIRGAS-SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKF  305 (329)
Q Consensus       236 ------~~kg~~-~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~  305 (329)
                            +.++.+ ...+.  +++ .+++||.+|+ .++.++|.++|. -++|+|.++++||++ ++|+.++.. ++|++.
T Consensus       303 ~~p~~~~~~~~~~~~~~e--~a~-~ii~Ai~~~~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~  378 (442)
T COG1486         303 EKPEELEKRIGAGKYSSE--YAS-NIINAIENNKPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEF  378 (442)
T ss_pred             cCchhhhhcCCcccccHH--HHH-HHHHHHhcCCceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHH
Confidence                  112221 12111  234 8999999998 999999999998 799999999999999 999999988 999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q psy9582         306 SRKKINLSIEELKNEILS  323 (329)
Q Consensus       306 E~~~l~~s~~~i~~~~~~  323 (329)
                      -+++++.....-+-.+++
T Consensus       379 ~~~l~~~~i~~e~l~veA  396 (442)
T COG1486         379 VKGLMHTNINVEELTVEA  396 (442)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999888766554444443

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3

Probab=99.83  E-value=5.1e-20  Score=156.23  Aligned_cols=156  Identities=14%  Similarity=0.157  Sum_probs=109.6

Q ss_pred             EEEEEcCCCchHHHH--HHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---HhhhhhcccCCccceEeecCccccc
Q psy9582           7 RISITGAAGQIGYNI--IFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---IMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         7 kI~IiGa~G~vG~~l--a~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      ||+|||| |++-.+.  ...+....-++.   .||+|+|++    +++++..   +..+.+.. ....+++.|+|.++|+
T Consensus         1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~---~ei~L~Did----~~RL~~~~~~~~~~~~~~-~~~~~v~~ttd~~eAl   71 (183)
T PF02056_consen    1 KITIIGA-GSTYFPLLLLGDLLRTEELSG---SEIVLMDID----EERLEIVERLARRMVEEA-GADLKVEATTDRREAL   71 (183)
T ss_dssp             EEEEETT-TSCCHHHHHHHHHHCTTTSTE---EEEEEE-SC----HHHHHHHHHHHHHHHHHC-TTSSEEEEESSHHHHH
T ss_pred             CEEEECC-chHhhHHHHHHHHhcCccCCC---cEEEEEcCC----HHHHHHHHHHHHHHHHhc-CCCeEEEEeCCHHHHh
Confidence            8999999 6665442  223333332221   299999999    6777632   22222221 2235788899999999


Q ss_pred             CCccEEEEeCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          82 KDANIAILIGS------------FPRKSNME----------RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        82 ~~aDiVi~~~g------------~~~~~g~~----------~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      +||||||.+..            .|.+.|..          ......|+++.+.++++.|+++| ||||++|+|||+.++
T Consensus        72 ~gADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~-PdAw~iNytNP~~~v  150 (183)
T PF02056_consen   72 EGADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELC-PDAWLINYTNPMGIV  150 (183)
T ss_dssp             TTESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSEEEE-SSSHHHH
T ss_pred             CCCCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEeccChHHHH
Confidence            99999999743            24454421          45667899999999999999998 999999999999999


Q ss_pred             HHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCC
Q psy9582         140 TYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNE  176 (329)
Q Consensus       140 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~  176 (329)
                      |+++.+++|+   .|++|+|.-. .-....+|+.||+
T Consensus       151 t~a~~r~~~~---~k~vGlCh~~-~~~~~~la~~L~~  183 (183)
T PF02056_consen  151 TEALSRYTPK---IKVVGLCHGP-QGTRRQLAKLLGM  183 (183)
T ss_dssp             HHHHHHHSTT---SEEEEE-SHH-HHHHHHHHHHHT-
T ss_pred             HHHHHHhCCC---CCEEEECCCH-HHHHHHHHHHhCc
Confidence            9999998833   4699999765 4678888888874

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=99.09  E-value=3.4e-10  Score=97.03  Aligned_cols=106  Identities=20%  Similarity=0.232  Sum_probs=72.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh----c---c-------cCCccceE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED----C---I-------FPLLVDVS   72 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~----~---~-------~~~~~~i~   72 (329)
                      ||+|+|| |.+|..+|..++..|+       +|+|+|.+    .+.++.....+..    .   .       .....+++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~   68 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGY-------EVTLYDRS----PEALERARKRIERLLDRLVRKGRLSQEEADAALARIS   68 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SS----HHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEE
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCC-------cEEEEECC----hHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcc
Confidence            7999999 9999999999999998       99999999    4433322111111    0   0       01235888


Q ss_pred             eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH
Q psy9582          73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY  141 (329)
Q Consensus        73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~  141 (329)
                      +++++.++. +||+||.+              ..++.+..+++...+.++|+|+++  ++||...+-..
T Consensus        69 ~~~dl~~~~-~adlViEa--------------i~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i~  120 (180)
T PF02737_consen   69 FTTDLEEAV-DADLVIEA--------------IPEDLELKQELFAELDEICPPDTI--LASNTSSLSIS  120 (180)
T ss_dssp             EESSGGGGC-TESEEEE---------------S-SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-HH
T ss_pred             cccCHHHHh-hhheehhh--------------ccccHHHHHHHHHHHHHHhCCCce--EEecCCCCCHH
Confidence            988876555 99999998              245678999999999999988986  57887655333

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.00  E-value=4.5e-09  Score=97.75  Aligned_cols=112  Identities=11%  Similarity=0.025  Sum_probs=81.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh----hhhh---cc---cCCccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM----EIED---CI---FPLLVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~----dl~~---~~---~~~~~~i~~~~   75 (329)
                      .||+|||+ |.||+.+|..++..|+       +|+++|++    .+.++....    .+..   ..   .....+++.++
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~-------~V~l~D~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~   75 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGL-------DVVAWDPA----PGAEAALRANVANAWPALERQGLAPGASPARLRFVA   75 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC
Confidence            78999999 9999999999999998       99999998    333321111    1110   00   01124667777


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK  145 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~  145 (329)
                      ++.+++++||+|+.+.              .+|.++.+++...+.++++|++  |+.||.+.+...-+..
T Consensus        76 ~l~~av~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la~  129 (321)
T PRK07066         76 TIEACVADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDFYA  129 (321)
T ss_pred             CHHHHhcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHHH
Confidence            8778999999999972              3556788889999999997787  5788888765544443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.94  E-value=6.2e-09  Score=95.77  Aligned_cols=111  Identities=17%  Similarity=0.186  Sum_probs=79.6

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------hhhcc-c------C
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------IEDCI-F------P   66 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------l~~~~-~------~   66 (329)
                      ||....||+|||+ |.+|..+|..++..|+       +|+++|++    .+.++.....       +.+.. .      .
T Consensus         1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~   68 (286)
T PRK07819          1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGV-------DVLVFETT----EELATAGRNRIEKSLERAVSRGKLTERERDA   68 (286)
T ss_pred             CCCCccEEEEEcc-cHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHHHHHHHHHHHhcccCChhhHHH
Confidence            5666579999999 9999999999999998       99999999    4443321111       11110 0      0


Q ss_pred             CccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcCchhhHH
Q psy9582          67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        67 ~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tNP~~~~~  140 (329)
                      ...+++.+++. +++++||+||.+              +.++.++.+.+...++++| +|++++  +||...+..
T Consensus        69 ~~~~l~~~~~~-~~~~~~d~ViEa--------------v~E~~~~K~~l~~~l~~~~~~~~~il--~snTS~~~~  126 (286)
T PRK07819         69 ALARLRFTTDL-GDFADRQLVIEA--------------VVEDEAVKTEIFAELDKVVTDPDAVL--ASNTSSIPI  126 (286)
T ss_pred             HHhCeEeeCCH-HHhCCCCEEEEe--------------cccCHHHHHHHHHHHHHhhCCCCcEE--EECCCCCCH
Confidence            12467777776 789999999998              3456688888889999998 688764  666555433

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=98.88  E-value=1.8e-08  Score=92.45  Aligned_cols=144  Identities=16%  Similarity=0.195  Sum_probs=98.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh----Hhhhhhcc-----c-----CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV----IMEIEDCI-----F-----PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~----~~dl~~~~-----~-----~~~~~i   71 (329)
                      +||+|||| |.||+.+|..++..|+       +|+|+|++    ++.++..    ...+....     .     ..+..+
T Consensus         4 ~kv~ViGa-G~MG~gIA~~~A~~G~-------~V~l~D~~----~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i   71 (307)
T COG1250           4 KKVAVIGA-GVMGAGIAAVFALAGY-------DVVLKDIS----PEALERALAYIEKNLEKLVEKGKLTEEEADAALARI   71 (307)
T ss_pred             cEEEEEcc-cchhHHHHHHHhhcCC-------ceEEEeCC----HHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhc
Confidence            68999999 9999999999999777       89999999    3333211    11111100     0     112466


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHC--C-
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA--P-  148 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~--~-  148 (329)
                      +.+++ ++++++||+||.+              ..+|.++.+++..++.++++|+++  +.||.+.+.-..+.+.+  | 
T Consensus        72 ~~~~~-~~~l~~~DlVIEA--------------v~E~levK~~vf~~l~~~~~~~aI--lASNTSsl~it~ia~~~~rpe  134 (307)
T COG1250          72 TPTTD-LAALKDADLVIEA--------------VVEDLELKKQVFAELEALAKPDAI--LASNTSSLSITELAEALKRPE  134 (307)
T ss_pred             cccCc-hhHhccCCEEEEe--------------ccccHHHHHHHHHHHHhhcCCCcE--EeeccCCCCHHHHHHHhCCch
Confidence            66666 4599999999998              467889999999999999988986  69998875433333332  1 


Q ss_pred             ------CCCC-C--c---EEE--echhHHHHHHHHHHHHhCCCC
Q psy9582         149 ------DLSY-K--N---FTA--MLRLDHNRAIAKLASKLNEPV  178 (329)
Q Consensus       149 ------~~~~-~--~---i~~--~t~lds~r~~~~la~~l~~~~  178 (329)
                            -|+| .  +   ++.  -|.-++......++++++..|
T Consensus       135 r~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~  178 (307)
T COG1250         135 RFIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTP  178 (307)
T ss_pred             hEEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCC
Confidence                  1222 1  1   222  256677777788888888554

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=98.88  E-value=4.9e-09  Score=87.82  Aligned_cols=111  Identities=16%  Similarity=0.196  Sum_probs=78.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc---C---CccceEeecCcccc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF---P---LLVDVSVHENPITA   80 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~---~~~~i~~~~~~~~a   80 (329)
                      ||+|+|| |++|.++|..|..++.       +|.||+++    ++.++.+..  .+...   +   ...++.+++|+.++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~-------~V~l~~~~----~~~~~~i~~--~~~n~~~~~~~~l~~~i~~t~dl~~a   66 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGH-------EVTLWGRD----EEQIEEINE--TRQNPKYLPGIKLPENIKATTDLEEA   66 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTE-------EEEEETSC----HHHHHHHHH--HTSETTTSTTSBEETTEEEESSHHHH
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-------EEEEEecc----HHHHHHHHH--hCCCCCCCCCcccCcccccccCHHHH
Confidence            8999999 9999999999999997       99999998    443432221  12111   1   12578899999999


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----CchhhHHHHHHHHC
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----NPVNTNTYITMKSA  147 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----NP~~~~~~~~~~~~  147 (329)
                      +++||+||++  +|.              ...+++++++..+.+++..+++++     +....+..++.+..
T Consensus        67 ~~~ad~Iiia--vPs--------------~~~~~~~~~l~~~l~~~~~ii~~~KG~~~~~~~~~~~~i~~~~  122 (157)
T PF01210_consen   67 LEDADIIIIA--VPS--------------QAHREVLEQLAPYLKKGQIIISATKGFEPGTLLLLSEVIEEIL  122 (157)
T ss_dssp             HTT-SEEEE---S-G--------------GGHHHHHHHHTTTSHTT-EEEETS-SEETTEEEEHHHHHHHHH
T ss_pred             hCcccEEEec--ccH--------------HHHHHHHHHHhhccCCCCEEEEecCCcccCCCccHHHHHHHHh
Confidence            9999999997  232              467888999999875666776665     23456777776665

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.86  E-value=8.6e-09  Score=88.66  Aligned_cols=124  Identities=15%  Similarity=0.144  Sum_probs=77.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--------C--ccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--------L--LVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--------~--~~~i~~~~   75 (329)
                      |||+|+|. |++|..+|..|+..|+       +|.-+|++    +++.+.+.....+...+        .  ..+++.++
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~-------~V~g~D~~----~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~   68 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGH-------QVIGVDID----EEKVEALNNGELPIYEPGLDELLKENVSAGRLRATT   68 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-----HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEES
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCC-------EEEEEeCC----hHHHHHHhhccccccccchhhhhccccccccchhhh
Confidence            68999998 9999999999999998       99999999    55444322111111001        0  14788988


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHH----HHHHHHC
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNT----YITMKSA  147 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~----~~~~~~~  147 (329)
                      +..+++++||++|++.++|.+.+.+      -+...+.+.++.|.++.+++.+|++-| =|.+..-    +++.+.+
T Consensus        69 ~~~~ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~  139 (185)
T PF03721_consen   69 DIEEAIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRS  139 (185)
T ss_dssp             EHHHHHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHC
T ss_pred             hhhhhhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhc
Confidence            8888899999999998888755422      233566677777777766666766665 4665444    5555555

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=98.85  E-value=3.4e-08  Score=90.84  Aligned_cols=113  Identities=14%  Similarity=0.187  Sum_probs=86.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC------ccceEeecCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL------LVDVSVHENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~------~~~i~~~~~~~~   79 (329)
                      +||+|+|| |++|+++|..|..++.       +|+||.++    ++..+.+-.+  +....+      ..++..++|+.+
T Consensus         2 ~kI~ViGa-GswGTALA~~la~ng~-------~V~lw~r~----~~~~~~i~~~--~~N~~yLp~i~lp~~l~at~Dl~~   67 (329)
T COG0240           2 MKIAVIGA-GSWGTALAKVLARNGH-------EVRLWGRD----EEIVAEINET--RENPKYLPGILLPPNLKATTDLAE   67 (329)
T ss_pred             ceEEEEcC-ChHHHHHHHHHHhcCC-------eeEEEecC----HHHHHHHHhc--CcCccccCCccCCcccccccCHHH
Confidence            68999999 9999999999999986       89999999    4433322111  222222      257888999999


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----CchhhHHHHHHHHCC
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----NPVNTNTYITMKSAP  148 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----NP~~~~~~~~~~~~~  148 (329)
                      ++++||+|++.  +|.              +.+++++++++.+..+++.++.+|     ++...++.++.+..|
T Consensus        68 a~~~ad~iv~a--vPs--------------~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~l~  125 (329)
T COG0240          68 ALDGADIIVIA--VPS--------------QALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEELP  125 (329)
T ss_pred             HHhcCCEEEEE--CCh--------------HHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHHcC
Confidence            99999999997  333              578888888876666788888887     456688888888763

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.83  E-value=3.6e-08  Score=92.09  Aligned_cols=121  Identities=14%  Similarity=0.168  Sum_probs=86.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh--------hhhhcccCC--ccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM--------EIEDCIFPL--LVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~--------dl~~~~~~~--~~~i~~~~   75 (329)
                      |||+|+|. |.||...+..|++.|+       +|+++|++    +++.+.+..        .|++.....  ..++++|+
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GH-------eVv~vDid----~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTt   68 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGH-------EVVCVDID----ESKVELLNKGISPIYEPGLEELLKENLASGRLRFTT   68 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEc
Confidence            68999998 9999999999999987       99999999    555543211        001000001  13599999


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhHHHHHH
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTNTYITM  144 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~~~~~~  144 (329)
                      |..+|++++|++|++.|+|.++..      ..+...+...++.|.++.+..++|++- |=|+.....+-.
T Consensus        69 d~~~a~~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~~  132 (414)
T COG1004          69 DYEEAVKDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVRA  132 (414)
T ss_pred             CHHHHHhcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHHH
Confidence            999999999999999999987633      245578888888888886333555554 458765554433

>KOG2304|consensus

Probab=98.81  E-value=2.9e-09  Score=91.76  Aligned_cols=117  Identities=24%  Similarity=0.254  Sum_probs=86.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc------C---------C
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF------P---------L   67 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~------~---------~   67 (329)
                      .+.+.|+|+|| |.+|+.+|+..+..|+       .|+|+|.+++.-.+..+++...+.+.+.      +         .
T Consensus         9 ~~~~~V~ivGa-G~MGSGIAQv~a~sg~-------~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~   80 (298)
T KOG2304|consen    9 AEIKNVAIVGA-GQMGSGIAQVAATSGL-------NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDT   80 (298)
T ss_pred             ccccceEEEcc-cccchhHHHHHHhcCC-------ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHH
Confidence            34578999999 9999999999999998       8999999942211112233333332210      1         1


Q ss_pred             ccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-HHHHH
Q psy9582          68 LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-NTYIT  143 (329)
Q Consensus        68 ~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-~~~~~  143 (329)
                      +..++.+++...++.+||+||.+              +.+|.++.+.+.+.+.+.|+++++  ..||...+ ++.++
T Consensus        81 l~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~i--l~tNTSSl~lt~ia  141 (298)
T KOG2304|consen   81 LDRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSSTI--LATNTSSLSLTDIA  141 (298)
T ss_pred             HHHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccceE--EeecccceeHHHHH
Confidence            24677788888999999998876              679999999999999999977775  68898764 44443

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.77  E-value=4.6e-08  Score=90.09  Aligned_cols=106  Identities=21%  Similarity=0.238  Sum_probs=73.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh---hc---ccC---------Ccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE---DC---IFP---------LLV   69 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~---~~---~~~---------~~~   69 (329)
                      .+||+|||+ |.+|+.+|..++..|.       +|+++|++    .+.++.....++   +.   ...         ...
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGF-------DVTIYDIS----DEALEKAKERIAKLADRYVRDLEATKEAPAEAALN   70 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHc
Confidence            368999999 9999999999999887       89999998    443332211110   00   000         124


Q ss_pred             ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      +++.+++..+++++||+||.+.              ..+.+..+++.+++.++++++++|  ++|....
T Consensus        71 ~i~~~~d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~sntSt~  123 (287)
T PRK08293         71 RITLTTDLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKTIF--ATNSSTL  123 (287)
T ss_pred             CeEEeCCHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCCEE--EECcccC
Confidence            6777888777899999999983              234567788888888888667653  5565554

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.73  E-value=6.3e-08  Score=89.37  Aligned_cols=107  Identities=17%  Similarity=0.212  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh----h----cccC------
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE----D----CIFP------   66 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~----~----~~~~------   66 (329)
                      ||. .+||+|||+ |.+|..+|..|+..|.       +|++||++    .+.++.....+.    .    ...+      
T Consensus         1 ~~~-~~kI~vIGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~   67 (292)
T PRK07530          1 MMA-IKKVGVIGA-GQMGNGIAHVCALAGY-------DVLLNDVS----ADRLEAGLATINGNLARQVAKGKISEEARAA   67 (292)
T ss_pred             CCC-CCEEEEECC-cHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence            454 478999999 9999999999999987       89999998    444432211111    0    0000      


Q ss_pred             CccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        67 ~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      ...+++.+++. +++++||+||.+.  |.            +....+.+.+.+.++++++++++  ||.+.
T Consensus        68 ~~~~i~~~~~~-~~~~~aD~Vieav--pe------------~~~~k~~~~~~l~~~~~~~~ii~--s~ts~  121 (292)
T PRK07530         68 ALARISTATDL-EDLADCDLVIEAA--TE------------DETVKRKIFAQLCPVLKPEAILA--TNTSS  121 (292)
T ss_pred             HHhCeEeeCCH-HHhcCCCEEEEcC--cC------------CHHHHHHHHHHHHhhCCCCcEEE--EcCCC
Confidence            11346676664 6799999999983  21            22455566677888887787654  45443

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.71  E-value=1.3e-07  Score=97.42  Aligned_cols=145  Identities=14%  Similarity=0.149  Sum_probs=97.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---H-hhhh---hcc--c-----CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---I-MEIE---DCI--F-----PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~-~dl~---~~~--~-----~~~~~i   71 (329)
                      .||+|||| |.+|..+|..++..|+       +|+|+|++    .+.++.-   . ..+.   ...  .     ....++
T Consensus       314 ~~v~ViGa-G~mG~gIA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i  381 (715)
T PRK11730        314 KQAAVLGA-GIMGGGIAYQSASKGV-------PVIMKDIN----QKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSI  381 (715)
T ss_pred             ceEEEECC-chhHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCe
Confidence            58999999 9999999999999998       89999999    4433211   1 1111   100  0     112578


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCC
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLS  151 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~  151 (329)
                      +.+++. +++++||+||.+              ..++.++.+++..+++++|+|+++  +.||.+.+-...+.+.. .. 
T Consensus       382 ~~~~~~-~~~~~aDlViEa--------------v~E~l~~K~~vf~~l~~~~~~~~i--lasNTSsl~i~~la~~~-~~-  442 (715)
T PRK11730        382 RPTLDY-AGFERVDVVVEA--------------VVENPKVKAAVLAEVEQKVREDTI--LASNTSTISISLLAKAL-KR-  442 (715)
T ss_pred             EEeCCH-HHhcCCCEEEec--------------ccCcHHHHHHHHHHHHhhCCCCcE--EEEcCCCCCHHHHHhhc-CC-
Confidence            888775 789999999998              356778999999999999988876  58998775433333332 11 


Q ss_pred             CCcEEE-------------------echhHHHHHHHHHHHHhCCCCCCe
Q psy9582         152 YKNFTA-------------------MLRLDHNRAIAKLASKLNEPVSSI  181 (329)
Q Consensus       152 ~~~i~~-------------------~t~lds~r~~~~la~~l~~~~~~v  181 (329)
                      |.|++|                   .|.-++.-....+++.+|..|--+
T Consensus       443 p~r~~g~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v  491 (715)
T PRK11730        443 PENFCGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVV  491 (715)
T ss_pred             CccEEEEecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEe
Confidence            122222                   245555445556677788665443

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.69  E-value=9.5e-08  Score=87.73  Aligned_cols=112  Identities=17%  Similarity=0.188  Sum_probs=75.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-h--H----hhhhhcc-c------CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-V--I----MEIEDCI-F------PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-~--~----~dl~~~~-~------~~~~~i   71 (329)
                      .||+|||+ |.+|..++..++..|+       +|+++|++    .++++. .  .    ..+.+.. .      ....++
T Consensus         4 ~kI~VIG~-G~mG~~ia~~la~~g~-------~V~~~d~~----~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l   71 (282)
T PRK05808          4 QKIGVIGA-GTMGNGIAQVCAVAGY-------DVVMVDIS----DAAVDRGLATITKSLDRLVKKGKMTEADKEAALARI   71 (282)
T ss_pred             cEEEEEcc-CHHHHHHHHHHHHCCC-------ceEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence            58999999 9999999999999987       89999998    444421 0  0    0111110 0      011356


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHH
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKS  146 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~  146 (329)
                      +.+++. +++++||+||++.              ..+....+++.+.+.++++|++++  .||-..+-...+.+.
T Consensus        72 ~~~~~~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la~~  129 (282)
T PRK05808         72 TGTTDL-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELAAA  129 (282)
T ss_pred             EEeCCH-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHHHh
Confidence            777764 6789999999983              334466778888899988778765  666655444444443

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.69  E-value=1.7e-07  Score=96.53  Aligned_cols=147  Identities=13%  Similarity=0.118  Sum_probs=97.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhh---hHhhhhhc----c--c-----CCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEIEDC----I--F-----PLLVD   70 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl~~~----~--~-----~~~~~   70 (329)
                      .||+|||| |.+|..+|..++ ..|+       +|+|+|.+    .+.++.   ...+..+.    .  .     ....+
T Consensus       310 ~~v~ViGa-G~mG~giA~~~a~~~G~-------~V~l~d~~----~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  377 (708)
T PRK11154        310 NKVGVLGG-GLMGGGIAYVTATKAGL-------PVRIKDIN----PQGINHALKYSWDLLDKKVKRRHLKPSERDKQMAL  377 (708)
T ss_pred             cEEEEECC-chhhHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhc
Confidence            68999999 999999999999 7788       99999998    333322   11111100    0  0     11257


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC--
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP--  148 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~--  148 (329)
                      ++.+++. +++++||+||.+              ..+|.++.+++..+++++|+|+++  +.||...+...-+.+...  
T Consensus       378 i~~~~~~-~~~~~aDlViEa--------------v~E~~~~K~~v~~~le~~~~~~~i--lasnTS~l~i~~la~~~~~p  440 (708)
T PRK11154        378 ISGTTDY-RGFKHADVVIEA--------------VFEDLALKQQMVAEVEQNCAPHTI--FASNTSSLPIGQIAAAAARP  440 (708)
T ss_pred             EEEeCCh-HHhccCCEEeec--------------ccccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHHHhcCcc
Confidence            8888875 789999999998              356789999999999999988986  578877653333333321  


Q ss_pred             -------CCC-CC--c---EEE--echhHHHHHHHHHHHHhCCCCCCe
Q psy9582         149 -------DLS-YK--N---FTA--MLRLDHNRAIAKLASKLNEPVSSI  181 (329)
Q Consensus       149 -------~~~-~~--~---i~~--~t~lds~r~~~~la~~l~~~~~~v  181 (329)
                             -|+ +.  +   |+.  .|.-++.-....+++.+|..|--+
T Consensus       441 ~r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v  488 (708)
T PRK11154        441 EQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVV  488 (708)
T ss_pred             cceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence                   111 11  1   222  255555555566777778665433

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=98.69  E-value=7.5e-08  Score=98.95  Aligned_cols=147  Identities=12%  Similarity=0.126  Sum_probs=97.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh---hHhhh-h---hcc--c-----CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEI-E---DCI--F-----PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl-~---~~~--~-----~~~~~i   71 (329)
                      .||+|||| |.+|..+|..++..|+       +|+|+|++    .+.++.   ...+. .   +..  .     ....++
T Consensus       314 ~~v~ViGa-G~mG~gIA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i  381 (714)
T TIGR02437       314 KQAAVLGA-GIMGGGIAYQSASKGT-------PIVMKDIN----QHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGI  381 (714)
T ss_pred             ceEEEECC-chHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCe
Confidence            68999999 9999999999999998       99999999    333321   11111 0   000  0     112478


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC---
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP---  148 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~---  148 (329)
                      +.+++. +++++||+||.+              ..++.++.+++..++.++|+|+++  +.||.+.+-..-+...++   
T Consensus       382 ~~~~~~-~~~~~aDlViEa--------------v~E~l~~K~~vf~~l~~~~~~~~i--lasnTS~l~i~~ia~~~~~p~  444 (714)
T TIGR02437       382 TPTLSY-AGFDNVDIVVEA--------------VVENPKVKAAVLAEVEQHVREDAI--LASNTSTISISLLAKALKRPE  444 (714)
T ss_pred             EEeCCH-HHhcCCCEEEEc--------------CcccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHHhhcCCcc
Confidence            888774 789999999998              356778999999999999988876  689987754333333321   


Q ss_pred             ------CCCC-Cc-----EEE--echhHHHHHHHHHHHHhCCCCCCe
Q psy9582         149 ------DLSY-KN-----FTA--MLRLDHNRAIAKLASKLNEPVSSI  181 (329)
Q Consensus       149 ------~~~~-~~-----i~~--~t~lds~r~~~~la~~l~~~~~~v  181 (329)
                            -|+| ..     |+.  .|.-++......+++.+|..|--+
T Consensus       445 r~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v  491 (714)
T TIGR02437       445 NFCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVV  491 (714)
T ss_pred             cEEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence                  1111 11     222  245555555566677777554433

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.68  E-value=1.6e-07  Score=87.35  Aligned_cols=108  Identities=18%  Similarity=0.196  Sum_probs=70.3

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc---c------CCccceE
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI---F------PLLVDVS   72 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~---~------~~~~~i~   72 (329)
                      |++.+||+|||+ |.+|.+++..|+..|+       +|+++|++    .+.++.....+....   .      ....+++
T Consensus         1 ~~~~~~I~vIGa-G~mG~~iA~~l~~~g~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   68 (311)
T PRK06130          1 MNPIQNLAIIGA-GTMGSGIAALFARKGL-------QVVLIDVM----EGALERARGVIERALGVYAPLGIASAGMGRIR   68 (311)
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC----HHHHHHHHHHHHHHHHHhhhcccHHHHhhceE
Confidence            666689999999 9999999999999887       89999998    444432221111100   0      0113456


Q ss_pred             eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      .+++..+++++||+||++.  |            ........+...+..+++++++|  +||...
T Consensus        69 ~~~~~~~~~~~aDlVi~av--~------------~~~~~~~~v~~~l~~~~~~~~ii--~s~tsg  117 (311)
T PRK06130         69 MEAGLAAAVSGADLVIEAV--P------------EKLELKRDVFARLDGLCDPDTIF--ATNTSG  117 (311)
T ss_pred             EeCCHHHHhccCCEEEEec--c------------CcHHHHHHHHHHHHHhCCCCcEE--EECCCC
Confidence            6677667899999999983  1            12234555666677776566654  355444

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=98.66  E-value=2.2e-07  Score=95.50  Aligned_cols=147  Identities=12%  Similarity=0.110  Sum_probs=95.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhH----hhhhhc---c--c-----CCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVI----MEIEDC---I--F-----PLLVD   70 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~----~dl~~~---~--~-----~~~~~   70 (329)
                      .||+|||| |.+|+.+|..++. .|+       +|+|+|.+    .+.++.-.    ..+...   .  .     ....+
T Consensus       305 ~~v~ViGa-G~mG~~iA~~~a~~~G~-------~V~l~d~~----~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  372 (699)
T TIGR02440       305 KKVGILGG-GLMGGGIASVTATKAGI-------PVRIKDIN----PQGINNALKYAWKLLDKGVKRRHMTPAERDNQMAL  372 (699)
T ss_pred             cEEEEECC-cHHHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcC
Confidence            68999999 9999999999984 788       99999999    33332211    111110   0  0     01257


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC--
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP--  148 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~--  148 (329)
                      ++.+++. +++++||+||.+              ..++.++.+++..++.++|+|+++  +.||.+.+...-+.....  
T Consensus       373 i~~~~~~-~~~~~adlViEa--------------v~E~l~~K~~v~~~l~~~~~~~~i--lasnTS~l~i~~la~~~~~p  435 (699)
T TIGR02440       373 ITGTTDY-RGFKDVDIVIEA--------------VFEDLALKHQMVKDIEQECAAHTI--FASNTSSLPIGQIAAAASRP  435 (699)
T ss_pred             eEEeCCh-HHhccCCEEEEe--------------ccccHHHHHHHHHHHHhhCCCCcE--EEeCCCCCCHHHHHHhcCCc
Confidence            8888875 789999999998              356778999999999999988876  588887753333333321  


Q ss_pred             -------CC-CCC--c---EEE--echhHHHHHHHHHHHHhCCCCCCe
Q psy9582         149 -------DL-SYK--N---FTA--MLRLDHNRAIAKLASKLNEPVSSI  181 (329)
Q Consensus       149 -------~~-~~~--~---i~~--~t~lds~r~~~~la~~l~~~~~~v  181 (329)
                             -+ |+.  +   |+.  .|.-++.-....+.+.+|..|--+
T Consensus       436 ~r~~g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v  483 (699)
T TIGR02440       436 ENVIGLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVV  483 (699)
T ss_pred             ccEEEEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence                   11 111  1   222  255555444556677777655433

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=98.66  E-value=1.6e-07  Score=96.81  Aligned_cols=144  Identities=15%  Similarity=0.132  Sum_probs=96.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---Hhh-hhhc---c--c-----CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---IME-IEDC---I--F-----PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~~d-l~~~---~--~-----~~~~~i   71 (329)
                      .||+|||| |.+|+.+|..++..|+       +|+|+|++    .+.++.-   ..+ +...   .  .     ....++
T Consensus       336 ~~v~ViGa-G~MG~gIA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i  403 (737)
T TIGR02441       336 KTLAVLGA-GLMGAGIAQVSVDKGL-------KTVLKDAT----PAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNL  403 (737)
T ss_pred             cEEEEECC-CHhHHHHHHHHHhCCC-------cEEEecCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence            68999999 9999999999999998       89999999    3333321   111 1100   0  0     012578


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC---
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP---  148 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~---  148 (329)
                      +.+++. +++++||+||.+              ..+|.++.+++...+.++|+|+++  +.||.+.+-..-+...++   
T Consensus       404 ~~~~~~-~~~~~aDlViEA--------------v~E~l~~K~~vf~~l~~~~~~~~i--lasNTSsl~i~~la~~~~~p~  466 (737)
T TIGR02441       404 TPTLDY-SGFKNADMVIEA--------------VFEDLSLKHKVIKEVEAVVPPHCI--IASNTSALPIKDIAAVSSRPE  466 (737)
T ss_pred             EEeCCH-HHhccCCeehhh--------------ccccHHHHHHHHHHHHhhCCCCcE--EEEcCCCCCHHHHHhhcCCcc
Confidence            888774 789999999987              356789999999999999988876  588887753333333321   


Q ss_pred             ------CCCC-C--c---EEE--echhHHHHHHHHHHHHhCCCC
Q psy9582         149 ------DLSY-K--N---FTA--MLRLDHNRAIAKLASKLNEPV  178 (329)
Q Consensus       149 ------~~~~-~--~---i~~--~t~lds~r~~~~la~~l~~~~  178 (329)
                            -|+| .  +   |+.  .|.-++.-....+++.+|..|
T Consensus       467 r~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~p  510 (737)
T TIGR02441       467 KVIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVV  510 (737)
T ss_pred             ceEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeE
Confidence                  1111 1  1   222  255555555666778888554

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.60  E-value=2.7e-07  Score=85.09  Aligned_cols=105  Identities=12%  Similarity=0.149  Sum_probs=70.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------hh---hccc-------CCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------IE---DCIF-------PLL   68 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------l~---~~~~-------~~~   68 (329)
                      .||+|||+ |.+|..+|..++..|.       +|+++|++    .+.++.....       +.   +...       ...
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~   71 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGY-------DVTIVDVS----EEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIM   71 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHH
Confidence            68999999 9999999999999987       89999999    4444321111       11   0000       011


Q ss_pred             cceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          69 VDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        69 ~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      .++..+++. +++++||+||.+.              ..+.+..+++.+.+.+++++++++  +||...+.
T Consensus        72 ~~i~~~~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~  125 (291)
T PRK06035         72 ARIRTSTSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIM  125 (291)
T ss_pred             hCcEeeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCC
Confidence            345566665 6899999999983              123356677778888888777765  45554433

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=98.60  E-value=3e-07  Score=84.99  Aligned_cols=108  Identities=16%  Similarity=0.185  Sum_probs=69.8

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh-------hhhhcc--c-----CC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM-------EIEDCI--F-----PL   67 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~-------dl~~~~--~-----~~   67 (329)
                      |++..||+|||+ |.+|..+|..|+..|.       +|+++|.+    .++++....       .+.+..  .     ..
T Consensus         1 ~~~~~~V~vIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   68 (295)
T PLN02545          1 MAEIKKVGVVGA-GQMGSGIAQLAAAAGM-------DVWLLDSD----PAALSRGLDSISSSLARLVKKGKMSQEEADAT   68 (295)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            444578999999 9999999999999887       89999998    433321110       111110  0     00


Q ss_pred             ccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          68 LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        68 ~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ...+..+++ .+++++||+||.+.              .++....+.+...+.++++|+++|  +||-..+
T Consensus        69 ~~~~~~~~~-~~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i  122 (295)
T PLN02545         69 LGRIRCTTN-LEELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSI  122 (295)
T ss_pred             HhceEeeCC-HHHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence            123455555 47899999999982              233356666677777777677754  3554443

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.59  E-value=2.7e-07  Score=85.04  Aligned_cols=98  Identities=17%  Similarity=0.190  Sum_probs=67.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh---hcc--c---------CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE---DCI--F---------PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~---~~~--~---------~~~~~i   71 (329)
                      .||+|||+ |.+|..+|..|+..|.       +|+++|++    ++.++.....+.   ...  .         ....++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i   69 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGF-------QTTLVDIK----QEQLESAQQEIASIFEQGVARGKLTEAARQAALARL   69 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCC-------cEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence            47999999 9999999999999887       89999999    444443211111   000  0         011346


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEE
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKV  129 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~v  129 (329)
                      +.+++..+++++||+||.+..              .+..+.+.+...+.++++|++++
T Consensus        70 ~~~~~~~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~il  113 (288)
T PRK09260         70 SYSLDLKAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECYI  113 (288)
T ss_pred             EEeCcHHHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcEE
Confidence            777777789999999999832              22345556666777887677754

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=98.58  E-value=2.8e-07  Score=91.20  Aligned_cols=105  Identities=16%  Similarity=0.164  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---Hhh-h---hhcc-------cCCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---IME-I---EDCI-------FPLLV   69 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~~d-l---~~~~-------~~~~~   69 (329)
                      .-.||+|||+ |.+|+.+|..++..|+       +|+++|++    .+.++..   ..+ +   .+..       ...+.
T Consensus         6 ~i~~V~VIGa-G~MG~gIA~~la~aG~-------~V~l~D~~----~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~   73 (507)
T PRK08268          6 SIATVAVIGA-GAMGAGIAQVAAQAGH-------TVLLYDAR----AGAAAAARDGIAARLAKLVEKGKLTAEQADAALA   73 (507)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHh
Confidence            4579999999 9999999999999998       99999999    4444321   111 1   0000       00124


Q ss_pred             ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +++.+++. +++++||+||.+              +.++..+.+.+...+.+.+++++++  +||...
T Consensus        74 ~i~~~~~~-~~~~~aDlViEa--------------v~E~~~vK~~vf~~l~~~~~~~ail--asntSt  124 (507)
T PRK08268         74 RLRPVEAL-ADLADCDLVVEA--------------IVERLDVKQALFAQLEAIVSPDCIL--ATNTSS  124 (507)
T ss_pred             CeEEeCCH-HHhCCCCEEEEc--------------CcccHHHHHHHHHHHHhhCCCCcEE--EECCCC
Confidence            57777765 678999999997              2345567777777889888778764  455443

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=98.56  E-value=4.5e-07  Score=89.72  Aligned_cols=109  Identities=10%  Similarity=-0.015  Sum_probs=72.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------hhhcc-cC--CccceE
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------IEDCI-FP--LLVDVS   72 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------l~~~~-~~--~~~~i~   72 (329)
                      ...+||+|||+ |.||+++|..|+..|+       +|+++|++    .++++.....       +.... .+  ...+++
T Consensus         2 ~~i~kIavIG~-G~MG~~iA~~la~~G~-------~V~v~D~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~   69 (495)
T PRK07531          2 TMIMKAACIGG-GVIGGGWAARFLLAGI-------DVAVFDPH----PEAERIIGEVLANAERAYAMLTDAPLPPEGRLT   69 (495)
T ss_pred             CCcCEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHhhhccchhhhhhceE
Confidence            33468999998 9999999999999998       89999998    4444321110       00000 00  112467


Q ss_pred             eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      .++++.+++++||+|+.+.              ..+.++.+.+...+.++++|+++  +.||..++.
T Consensus        70 ~~~~~~ea~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~i--I~SsTsgi~  120 (495)
T PRK07531         70 FCASLAEAVAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDAL--IGSSTSGFL  120 (495)
T ss_pred             eeCCHHHHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcE--EEEcCCCCC
Confidence            7778778999999999872              22334556666677788766653  466655543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.54  E-value=6.8e-07  Score=79.04  Aligned_cols=104  Identities=14%  Similarity=0.177  Sum_probs=67.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~al~~   83 (329)
                      |||+|||++|.+|++++..|.+.+.       +|.++|++    .++++....+..+...  +...++.. ++..+++++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~----~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~   68 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRD----LEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKR   68 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcC----HHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhc
Confidence            5899998449999999999999886       89999998    5555544433322110  11112232 244678999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      +|+||++...                ..+.++++.+.... ++.+||-++||...
T Consensus        69 aDvVilavp~----------------~~~~~~l~~l~~~l-~~~vvI~~~ngi~~  106 (219)
T TIGR01915        69 ADVVILAVPW----------------DHVLKTLESLRDEL-SGKLVISPVVPLAS  106 (219)
T ss_pred             CCEEEEECCH----------------HHHHHHHHHHHHhc-cCCEEEEeccCcee
Confidence            9999998321                23444455555543 34678889999753

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=98.53  E-value=4e-07  Score=89.94  Aligned_cols=105  Identities=18%  Similarity=0.184  Sum_probs=74.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh-------hhhhcc-c------CCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM-------EIEDCI-F------PLLVD   70 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~-------dl~~~~-~------~~~~~   70 (329)
                      ..||+|||+ |.||+.+|..++..|+       +|++||++    .+.++....       .+.... .      ..+.+
T Consensus         5 ~~kV~VIGa-G~MG~gIA~~la~aG~-------~V~l~d~~----~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~   72 (503)
T TIGR02279         5 VVTVAVIGA-GAMGAGIAQVAASAGH-------QVLLYDIR----AEALARAIAGIEARLNSLVTKGKLTAEECERTLKR   72 (503)
T ss_pred             ccEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhc
Confidence            468999999 9999999999999998       89999999    444432111       111110 0      01246


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++.+++. +++++||+||.+              +.++..+.+.+...+.++|+|+++  +.||.+.+
T Consensus        73 i~~~~~~-~~l~~aDlVIEa--------------v~E~~~vK~~vf~~l~~~~~~~~I--lasnTStl  123 (503)
T TIGR02279        73 LIPVTDL-HALADAGLVIEA--------------IVENLEVKKALFAQLEELCPADTI--IASNTSSL  123 (503)
T ss_pred             cEEeCCH-HHhCCCCEEEEc--------------CcCcHHHHHHHHHHHHhhCCCCeE--EEECCCCC
Confidence            7777775 678999999998              234557777888889999877765  57776654

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.48  E-value=3.4e-07  Score=83.48  Aligned_cols=122  Identities=18%  Similarity=0.184  Sum_probs=80.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-c--------CCccceEeecCcc
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-F--------PLLVDVSVHENPI   78 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~--------~~~~~i~~~~~~~   78 (329)
                      |.|+||+|++|+.++..|+..+..      +|+++|++    +..+.....++.... .        +.+.+++-...+.
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~------~lil~d~~----E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~   70 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPK------KLILFDRD----ENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLN   70 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-S------EEEEEES-----HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCC------eEEEeCCC----hhHHHHHHHHHhhcccccCcccccCceeecccCHHHHH
Confidence            689999999999999999987642      89999999    677776777774211 0        1123333333445


Q ss_pred             cccC--CccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc----CchhhHH
Q psy9582          79 TAFK--DANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG----NPVNTNT  140 (329)
Q Consensus        79 ~al~--~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t----NP~~~~~  140 (329)
                      ++++  +.|+|+++|....-|-  ....+.+..|+-..+++++...++. .+.+|.+.|    ||+++|.
T Consensus        71 ~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv~PtnvmG  139 (293)
T PF02719_consen   71 RIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAVNPTNVMG  139 (293)
T ss_dssp             HHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCSS--SHHH
T ss_pred             HHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccCCCCcHHH
Confidence            6677  9999999987654332  2466778999999999999999985 776666665    7888764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=98.42  E-value=1.7e-06  Score=81.43  Aligned_cols=122  Identities=13%  Similarity=0.161  Sum_probs=79.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCC-CceEEEEecCCcc-cccchhhhHhhhhhcccCC------ccceEeecCcc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQ-PIILQLLEASNKK-SQKAIKGVIMEIEDCIFPL------LVDVSVHENPI   78 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~------~~~i~~~~~~~   78 (329)
                      ||+|||+ |++|.++|..|..++....+. ..+|.||.+++.- .++..+  ..+-.+....+      ..++++++|+.
T Consensus         1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~--~in~~~~n~~ylpgi~Lp~~i~at~dl~   77 (342)
T TIGR03376         1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTE--IINTTHENVKYLPGIKLPANLVAVPDLV   77 (342)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHH--HHHhcCCCccccCCCcCCCCeEEECCHH
Confidence            6999998 999999999999877221110 0189999985200 011111  11112222111      24688889988


Q ss_pred             cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----C--chhhHHHHHHHHC
Q psy9582          79 TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----N--PVNTNTYITMKSA  147 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----N--P~~~~~~~~~~~~  147 (329)
                      +++++||+||++  +|.              ..++++++++..+..++..+|.++     +  ..-.++.++.+..
T Consensus        78 eal~~ADiIIlA--VPs--------------~~i~~vl~~l~~~l~~~~~iVs~tKGie~~~~~~~~~se~i~e~l  137 (342)
T TIGR03376        78 EAAKGADILVFV--IPH--------------QFLEGICKQLKGHVKPNARAISCIKGLEVSKDGVKLLSDIIEEEL  137 (342)
T ss_pred             HHHhcCCEEEEE--CCh--------------HHHHHHHHHHHhhcCCCCEEEEEeCCcccCCCcCccHHHHHHHHh
Confidence            999999999997  332              577888888887765666777776     2  3346777777765

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=98.42  E-value=7.7e-07  Score=67.85  Aligned_cols=94  Identities=17%  Similarity=0.227  Sum_probs=64.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a   84 (329)
                      ||+|||+ |++|++++..|...+. .   |.+|.++ +++    .+++.....++.         +.... +..++++++
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~-~---~~~v~~~~~r~----~~~~~~~~~~~~---------~~~~~~~~~~~~~~a   62 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGI-K---PHEVIIVSSRS----PEKAAELAKEYG---------VQATADDNEEAAQEA   62 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-----GGEEEEEEESS----HHHHHHHHHHCT---------TEEESEEHHHHHHHT
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-C---ceeEEeeccCc----HHHHHHHHHhhc---------cccccCChHHhhccC
Confidence            7999998 9999999999999985 2   1288866 888    555543322221         22223 567899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+||++.  +.              ..+.++++.+... .++..+|-++||
T Consensus        63 dvvilav--~p--------------~~~~~v~~~i~~~-~~~~~vis~~ag   96 (96)
T PF03807_consen   63 DVVILAV--KP--------------QQLPEVLSEIPHL-LKGKLVISIAAG   96 (96)
T ss_dssp             SEEEE-S---G--------------GGHHHHHHHHHHH-HTTSEEEEESTT
T ss_pred             CEEEEEE--CH--------------HHHHHHHHHHhhc-cCCCEEEEeCCC
Confidence            9999983  11              3566677777444 478888888876

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.40  E-value=2.4e-06  Score=80.98  Aligned_cols=119  Identities=11%  Similarity=0.151  Sum_probs=79.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCC----CCCCCCceEEEEecCCcccccc-hhhhHhhhh--hcccC------Cccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDL----LGKDQPIILQLLEASNKKSQKA-IKGVIMEIE--DCIFP------LLVD   70 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~----~~~~~~~ei~L~D~~~~~~~~~-~~~~~~dl~--~~~~~------~~~~   70 (329)
                      +++||+|||+ |.+|+++|..|..++.    ++.    +|.||.++    ++. -+..+.++.  +....      +..+
T Consensus        10 ~~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~----~V~lw~~~----~~~~~~~~~~~in~~~~N~~ylp~~~Lp~n   80 (365)
T PTZ00345         10 GPLKVSVIGS-GNWGSAISKVVGENTQRNYIFHN----EVRMWVLE----EIVEGEKLSDIINTKHENVKYLPGIKLPDN   80 (365)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCC----eEEEEEec----ccccchHHHHHHHhcCCCcccCCCCcCCCc
Confidence            4589999999 9999999999998762    111    89999888    221 011222333  22211      2357


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh--hcCCCeEEEEEcC---ch----hhHHH
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS--VASRDVKVLVVGN---PV----NTNTY  141 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~--~~~p~a~viv~tN---P~----~~~~~  141 (329)
                      +.+++|+.+++++||+||++  +|.              +.+++++++++.  +..+++++|.++-   +.    ..++.
T Consensus        81 i~~tsdl~eav~~aDiIvlA--VPs--------------q~l~~vl~~l~~~~~l~~~~~iIS~aKGIe~~t~~~~~~se  144 (365)
T PTZ00345         81 IVAVSDLKEAVEDADLLIFV--IPH--------------QFLESVLSQIKENNNLKKHARAISLTKGIIVENGKPVLCSD  144 (365)
T ss_pred             eEEecCHHHHHhcCCEEEEE--cCh--------------HHHHHHHHHhccccccCCCCEEEEEeCCcccCCCCcccHHH
Confidence            88899988899999999987  332              577888888887  5445666666652   21    35677


Q ss_pred             HHHHHC
Q psy9582         142 ITMKSA  147 (329)
Q Consensus       142 ~~~~~~  147 (329)
                      ++.+..
T Consensus       145 vi~e~l  150 (365)
T PTZ00345        145 VIEEEL  150 (365)
T ss_pred             HHHHHh
Confidence            777765

>KOG1502|consensus

Probab=98.37  E-value=4.3e-06  Score=77.13  Aligned_cols=123  Identities=15%  Similarity=0.062  Sum_probs=82.5

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEeecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVHEN   76 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~~~   76 (329)
                      ||. ..++|+|+||+|+||+.++..|+++|+       +|+-.=++.+. +++ .....++......   +..++.-...
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~-~k~-~~~L~~l~~a~~~l~l~~aDL~d~~s   71 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPED-EKK-TEHLRKLEGAKERLKLFKADLLDEGS   71 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcch-hhh-HHHHHhcccCcccceEEeccccccch
Confidence            554 468999999999999999999999999       78777666211 111 1134445422211   1234444556


Q ss_pred             cccccCCccEEEEeCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 PITAFKDANIAILIGSFPRKSNM-ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~-~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..+|++|||.||++|....-... ...+++.-.++...++.+.+.++.  ...=+++|.
T Consensus        72 f~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TS  128 (327)
T KOG1502|consen   72 FDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTS  128 (327)
T ss_pred             HHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEec
Confidence            77899999999999864322111 244678889999999999999973  333334443

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=98.36  E-value=3.2e-06  Score=82.88  Aligned_cols=123  Identities=18%  Similarity=0.122  Sum_probs=79.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----C-----ccceEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----L-----LVDVSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----~-----~~~i~~~~~   76 (329)
                      |||+|+|+ |.+|..+|..|+..|.--     +|+.+|++    +++++.+.........+    +     ..+++++++
T Consensus         2 m~I~ViG~-GyvGl~~A~~lA~~g~g~-----~V~gvD~~----~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~   71 (473)
T PLN02353          2 VKICCIGA-GYVGGPTMAVIALKCPDI-----EVVVVDIS----VPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTD   71 (473)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCC-----eEEEEECC----HHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcC
Confidence            57999998 999999999999875211     89999999    55554322111111000    1     125888888


Q ss_pred             cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhH
Q psy9582          77 PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTN  139 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~  139 (329)
                      ..+++++||++|++.++|.+.+....+ -.-+...+.+.++.|.++.+++.+||+- |-|....
T Consensus        72 ~~~~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt  134 (473)
T PLN02353         72 VEKHVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA  134 (473)
T ss_pred             HHHHHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChH
Confidence            778999999999999988753210000 0124456778888888877555555444 4576543

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.33  E-value=5.5e-06  Score=78.21  Aligned_cols=116  Identities=14%  Similarity=0.030  Sum_probs=78.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh---hc--ccCCccceEeecCc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE---DC--IFPLLVDVSVHENP   77 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~---~~--~~~~~~~i~~~~~~   77 (329)
                      ++++||+|+|+ |.+|+.++..|...+        ++++|.++    ++..+.+..+-.   ..  ......++..+++.
T Consensus         5 ~~~mkI~IiGa-Ga~G~alA~~La~~g--------~v~l~~~~----~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~   71 (341)
T PRK12439          5 KREPKVVVLGG-GSWGTTVASICARRG--------PTLQWVRS----AETADDINDNHRNSRYLGNDVVLSDTLRATTDF   71 (341)
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCC--------CEEEEeCC----HHHHHHHHhcCCCcccCCCCcccCCCeEEECCH
Confidence            35689999999 999999999999876        36788876    333332211110   00  00111356777887


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-----HHHHHHHHC
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-----NTYITMKSA  147 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-----~~~~~~~~~  147 (329)
                      .++++++|+||++.  |              ...++++++++..+.+++..+|.++|-.+.     +...+.+..
T Consensus        72 ~~a~~~aDlVilav--p--------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~l  130 (341)
T PRK12439         72 AEAANCADVVVMGV--P--------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEVL  130 (341)
T ss_pred             HHHHhcCCEEEEEe--C--------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHHc
Confidence            78899999999982  2              146777788888776677788888886553     456666654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.31  E-value=3e-06  Score=77.78  Aligned_cols=106  Identities=14%  Similarity=0.148  Sum_probs=73.5

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccccCCccE
Q psy9582           9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~al~~aDi   86 (329)
                      .|+||+|++|++++..|++.+...     +|+.+|+...  .....    ++.....  ....+++-..++.++++++|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~-----~Vr~~d~~~~--~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIY-----EVRVLDRSPP--PKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCce-----EEEEcccccc--cccch----hhhcccceeEEEeccccHHHHHHHhcCCce
Confidence            389999999999999999988433     8999999831  11111    1111110  111344444567889999999


Q ss_pred             EEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy9582          87 AILIGSFPRKSN-MERSELLAINSSIFIEQGKALNSVASRD  126 (329)
Q Consensus        87 Vi~~~g~~~~~g-~~~~~~~~~n~~~~~~i~~~i~~~~~p~  126 (329)
                      ||++|....-.+ .+...+...|+...+++.+...+.. -.
T Consensus        70 V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-Vk  109 (280)
T PF01073_consen   70 VFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VK  109 (280)
T ss_pred             EEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence            999987533233 4566788999999999999998863 44

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.31  E-value=4e-06  Score=78.00  Aligned_cols=104  Identities=18%  Similarity=0.188  Sum_probs=66.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH----h---hhhhccc-------CCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI----M---EIEDCIF-------PLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~----~---dl~~~~~-------~~~~~i   71 (329)
                      +||+|||+ |.+|+++|..|+..|+       +|++||++    .+.++...    .   .+.....       ....++
T Consensus         3 ~~V~VIG~-G~mG~~iA~~la~~G~-------~V~v~d~~----~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i   70 (308)
T PRK06129          3 GSVAIIGA-GLIGRAWAIVFARAGH-------EVRLWDAD----PAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARI   70 (308)
T ss_pred             cEEEEECc-cHHHHHHHHHHHHCCC-------eeEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCe
Confidence            47999998 9999999999999987       89999998    33333211    0   0111100       112346


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +.+++..+++++||+|+.+.  |            .+....+.+...+.+.++++.++  .||...
T Consensus        71 ~~~~~~~~a~~~ad~Vi~av--p------------e~~~~k~~~~~~l~~~~~~~~ii--~ssts~  120 (308)
T PRK06129         71 RVTDSLADAVADADYVQESA--P------------ENLELKRALFAELDALAPPHAIL--ASSTSA  120 (308)
T ss_pred             EEECcHHHhhCCCCEEEECC--c------------CCHHHHHHHHHHHHHhCCCcceE--EEeCCC
Confidence            77788777899999999973  1            12234455556677776445433  455443

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=98.30  E-value=5.7e-06  Score=80.08  Aligned_cols=110  Identities=14%  Similarity=0.158  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~~   75 (329)
                      |||+|||. |.+|..+|..|+..|.       +|+++|++    .++.+...........+.          ..+++.++
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~-------~V~~~d~~----~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~   68 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGH-------EVTGVDID----QEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATT   68 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCC-------eEEEEECC----HHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEEC
Confidence            47999998 9999999999999887       89999998    444432211100000000          12366777


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +..+++++||+||++.+.|.....+      -+...+.+.++.+.++.+++.+|+..|
T Consensus        69 ~~~~~~~~advvii~vpt~~~~~~~------~d~~~v~~~~~~i~~~l~~g~lvi~~S  120 (411)
T TIGR03026        69 DYEDAIRDADVIIICVPTPLKEDGS------PDLSYVESAAETIAKHLRKGATVVLES  120 (411)
T ss_pred             CHHHHHhhCCEEEEEeCCCCCCCCC------cChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            7677899999999997776543211      233455555666666555666666665

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.29  E-value=9.8e-06  Score=78.99  Aligned_cols=113  Identities=12%  Similarity=0.154  Sum_probs=74.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecC-cccc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HEN-PITA   80 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~-~~~a   80 (329)
                      ++++||.|+||+|++|++++..|+..|.       +|+.+|+..    .........+.. . +   .+.. ..| ..++
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~----~~~~~~~~~~~~-~-~---~~~~~~~Di~~~~  181 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFF----TGRKENLVHLFG-N-P---RFELIRHDVVEPI  181 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCC----CccHhHhhhhcc-C-C---ceEEEECcccccc
Confidence            3568999999999999999999999887       899999861    111101111110 0 0   1111 112 2345


Q ss_pred             cCCccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +.++|+||++|+...  ....+..+.+..|+....++++.+++.. .  .+|.+|.
T Consensus       182 ~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~--r~V~~SS  234 (436)
T PLN02166        182 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--RFLLTST  234 (436)
T ss_pred             ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C--EEEEECc
Confidence            778999999987432  2223456778899999999999999863 3  5566654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.27  E-value=4.9e-06  Score=81.21  Aligned_cols=126  Identities=17%  Similarity=0.131  Sum_probs=96.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-----CCccceEeecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-----PLLVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-----~~~~~i~~~~~~~   78 (329)
                      +.+.|.|+||+|++|+.+...++..+.-      +|+++|.+    +.++..+..++.+...     ++..+++-.....
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~------~i~l~~~~----E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~  318 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPK------EIILFSRD----EYKLYLIDMELREKFPELKLRFYIGDVRDRDRVE  318 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCC------EEEEecCc----hHHHHHHHHHHHhhCCCcceEEEecccccHHHHH
Confidence            3578999999999999999999988542      99999999    6666666666665310     1224454445567


Q ss_pred             cccCC--ccEEEEeCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc----CchhhHH
Q psy9582          79 TAFKD--ANIAILIGSFPRKSNM--ERSELLAINSSIFIEQGKALNSVASRDVKVLVVG----NPVNTNT  140 (329)
Q Consensus        79 ~al~~--aDiVi~~~g~~~~~g~--~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t----NP~~~~~  140 (329)
                      .++++  .|+|+++|....-|-.  +..+-+..|+-..+++++...++. -+.+|.+.|    ||.|+|.
T Consensus       319 ~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~PtNvmG  387 (588)
T COG1086         319 RAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVNPTNVMG  387 (588)
T ss_pred             HHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccCCchHhh
Confidence            78888  9999999987766643  456778899999999999999975 676777766    8888764

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=98.26  E-value=6.9e-06  Score=76.69  Aligned_cols=114  Identities=14%  Similarity=0.172  Sum_probs=73.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~~al   81 (329)
                      +||+|||+ |.+|+.++..|...+.       +|.++|++    .++++....+..+..    ......+..+++..+++
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGH-------DVTLWARD----PEQAAEINADRENPRYLPGIKLPDNLRATTDLAEAL   69 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHH
Confidence            37999998 9999999999999887       89999998    444443222110100    00112355566666788


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh-----hHHHHHHHHC
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN-----TNTYITMKSA  147 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~-----~~~~~~~~~~  147 (329)
                      +++|+||++...                ..+.++.+.+..+.+++.+++.++|-++     .+...+.+..
T Consensus        70 ~~~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~~~~~~~~~~~l~~~~  124 (325)
T PRK00094         70 ADADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIEPGTGKLLSEVLEEEL  124 (325)
T ss_pred             hCCCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeecccCCCCCcHHHHHHHHc
Confidence            999999998321                2345555666666557788888887544     2345555544

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.26  E-value=5.5e-06  Score=77.74  Aligned_cols=103  Identities=17%  Similarity=0.243  Sum_probs=66.9

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc----ccCCccceEeecCc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC----IFPLLVDVSVHENP   77 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~----~~~~~~~i~~~~~~   77 (329)
                      |...|||+|||+ |.+|+.++..|+..|.       +|++||++    .++++.........    ......++..+++.
T Consensus         1 ~~~~m~I~iIG~-G~mG~~ia~~L~~~G~-------~V~~~~r~----~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~   68 (328)
T PRK14618          1 MHHGMRVAVLGA-GAWGTALAVLAASKGV-------PVRLWARR----PEFAAALAAERENREYLPGVALPAELYPTADP   68 (328)
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHhCcccccCCCCcCCCCeEEeCCH
Confidence            556679999999 9999999999999887       89999998    44443322111000    00111235566677


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      .++++++|+||++.  |.              ..++++.+.   . .|+.+++.++|..
T Consensus        69 ~e~~~~aD~Vi~~v--~~--------------~~~~~v~~~---l-~~~~~vi~~~~Gi  107 (328)
T PRK14618         69 EEALAGADFAVVAV--PS--------------KALRETLAG---L-PRALGYVSCAKGL  107 (328)
T ss_pred             HHHHcCCCEEEEEC--ch--------------HHHHHHHHh---c-CcCCEEEEEeecc
Confidence            77889999999972  11              112333332   2 3666788888864

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.25  E-value=6.7e-06  Score=77.06  Aligned_cols=114  Identities=17%  Similarity=0.246  Sum_probs=74.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~~al   81 (329)
                      |||+|||| |.+|+.++..|.+.+.       +|.+++++    ++.++.+..+-....    .....+++.+++..+++
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~-------~V~l~~r~----~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKI-------SVNLWGRN----HTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVL   68 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC-------eEEEEecC----HHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHH
Confidence            47999999 9999999999999886       89999998    443433322111110    01123566777776776


Q ss_pred             -CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEcCchhh-----HHHHHHHHC
Q psy9582          82 -KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS-VASRDVKVLVVGNPVNT-----NTYITMKSA  147 (329)
Q Consensus        82 -~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~-~~~p~a~viv~tNP~~~-----~~~~~~~~~  147 (329)
                       .++|+||++.  |.              ..+.++++.+.. +.+++..++..+|=.+.     ....+.+..
T Consensus        69 ~~~~Dliiiav--ks--------------~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~~~~~~~~~~l~~~~  125 (326)
T PRK14620         69 SDNATCIILAV--PT--------------QQLRTICQQLQDCHLKKNTPILICSKGIEKSSLKFPSEIVNEIL  125 (326)
T ss_pred             hCCCCEEEEEe--CH--------------HHHHHHHHHHHHhcCCCCCEEEEEEcCeeCCCCccHHHHHHHHc
Confidence             5899999972  11              456666677766 54567777778875532     244555554

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=98.25  E-value=3.7e-05  Score=66.51  Aligned_cols=95  Identities=19%  Similarity=0.223  Sum_probs=66.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |+++|+|+ |++|++++..+...++       ||.+-.++.   +++++..+..+.       ..++. ....+|.+.||
T Consensus         2 ~~~~i~Gt-GniG~alA~~~a~ag~-------eV~igs~r~---~~~~~a~a~~l~-------~~i~~-~~~~dA~~~aD   62 (211)
T COG2085           2 MIIAIIGT-GNIGSALALRLAKAGH-------EVIIGSSRG---PKALAAAAAALG-------PLITG-GSNEDAAALAD   62 (211)
T ss_pred             cEEEEecc-ChHHHHHHHHHHhCCC-------eEEEecCCC---hhHHHHHHHhhc-------ccccc-CChHHHHhcCC
Confidence            56999998 9999999999999997       899887772   333443332222       12333 24578999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++.  |.              +.+.++.+.++..- .+.+||-.|||.
T Consensus        63 VVvLAV--P~--------------~a~~~v~~~l~~~~-~~KIvID~tnp~   96 (211)
T COG2085          63 VVVLAV--PF--------------EAIPDVLAELRDAL-GGKIVIDATNPI   96 (211)
T ss_pred             EEEEec--cH--------------HHHHhHHHHHHHHh-CCeEEEecCCCc
Confidence            999983  22              34555666666643 467889999994

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=98.25  E-value=2.6e-05  Score=74.76  Aligned_cols=119  Identities=15%  Similarity=0.169  Sum_probs=71.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--------CccceEeecCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--------LLVDVSVHENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--------~~~~i~~~~~~   77 (329)
                      |||+|||+ |.||..+|..++. |+       +|+.+|++    +++++...........+        ...+++.+++.
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA~-G~-------~VigvD~d----~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~   67 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIAQ-NH-------EVVALDIL----PSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDK   67 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-CC-------cEEEEECC----HHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecch
Confidence            48999998 9999999977775 65       89999999    55554322111110001        11245555666


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHH
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYIT  143 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~  143 (329)
                      .++.++||+||++.+.|......     .-+...+++.++.+.+. +++.+||+-| -|.+..-.+.
T Consensus        68 ~~~~~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~-~~g~lVV~~STv~pgtt~~l~  128 (388)
T PRK15057         68 NEAYRDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEI-NPYAVMVIKSTVPVGFTAAMH  128 (388)
T ss_pred             hhhhcCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhc-CCCCEEEEeeecCCchHHHHH
Confidence            67889999999997665321111     12334555555655553 4666666554 5665444443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=98.20  E-value=6.3e-06  Score=69.40  Aligned_cols=92  Identities=13%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||. |.+|+.++..|+..|+       +|+.||++    .++++    ++.+.      ..+...+..++++++|
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~-------~v~~~d~~----~~~~~----~~~~~------g~~~~~s~~e~~~~~d   59 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGY-------EVTVYDRS----PEKAE----ALAEA------GAEVADSPAEAAEQAD   59 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESS----HHHHH----HHHHT------TEEEESSHHHHHHHBS
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCC-------eEEeeccc----hhhhh----hhHHh------hhhhhhhhhhHhhccc
Confidence            57999998 9999999999999998       99999998    44443    23322      2556677788999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHH--HhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKA--LNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~--i~~~~~p~a~viv~tN  134 (329)
                      +||.+-               .+.+.++++...  +.....+..++|..|+
T Consensus        60 vvi~~v---------------~~~~~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   60 VVILCV---------------PDDDAVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             EEEE-S---------------SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             ceEeec---------------ccchhhhhhhhhhHHhhccccceEEEecCC
Confidence            999972               122456666665  5555446666666654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG2711|consensus

Probab=98.16  E-value=2.5e-05  Score=71.68  Aligned_cols=140  Identities=13%  Similarity=0.211  Sum_probs=90.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccc--cchhhhHhhhhhcccCC------ccceEe
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQ--KAIKGVIMEIEDCIFPL------LVDVSV   73 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~--~~~~~~~~dl~~~~~~~------~~~i~~   73 (329)
                      +.+.||+|||+ |++|+++|..+... .-+..-+| +|+.|-..+.-..  +++. .+.+-.|....+      ..++..
T Consensus        19 ~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~-~Vrmwv~ee~i~~~~~~L~-eiIN~~heN~KYlpg~~lP~NvvA   95 (372)
T KOG2711|consen   19 RDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDP-QVRMWVFEEEINGEAEKLT-EIINSRHENVKYLPGIKLPENVVA   95 (372)
T ss_pred             cCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCc-eeeEEEeccccCChhHHHH-HHhccccccccccCCccCCCCeEe
Confidence            34689999998 99999999988754 11111112 4555544310001  1222 122223333222      258888


Q ss_pred             ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC--------c-hhhHHHHHH
Q psy9582          74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN--------P-VNTNTYITM  144 (329)
Q Consensus        74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN--------P-~~~~~~~~~  144 (329)
                      .+|+.++++|||++|+.  .|.              +.+.+++++|..+-+|++..|-.+-        | ..+++.++.
T Consensus        96 v~dl~ea~~dADilvf~--vPh--------------Qf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI~  159 (372)
T KOG2711|consen   96 VPDLVEAAKDADILVFV--VPH--------------QFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQIIH  159 (372)
T ss_pred             cchHHHHhccCCEEEEe--CCh--------------hhHHHHHHHHhcccCCCCeEEEeecceeccCCCCceeehHHHHH
Confidence            99999999999999997  343              4677889999998878887766642        3 578888888


Q ss_pred             HHCCCCCCCcEEEechhHH
Q psy9582         145 KSAPDLSYKNFTAMLRLDH  163 (329)
Q Consensus       145 ~~~~~~~~~~i~~~t~lds  163 (329)
                      +.. ++|.. +..|+++.+
T Consensus       160 ~~l-gI~~~-vL~GaNiA~  176 (372)
T KOG2711|consen  160 RAL-GIPCS-VLMGANIAS  176 (372)
T ss_pred             HHh-CCCce-eecCCchHH
Confidence            888 77754 556666543

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=98.16  E-value=1.7e-05  Score=73.25  Aligned_cols=107  Identities=19%  Similarity=0.141  Sum_probs=66.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~~~~i~~~~~~~~al~~a   84 (329)
                      |||+|+|+ |.+|+.++..|.+.|.       +|.++|++    .+.++....+-... .......+..+.+.. .++++
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~-------~V~~~~r~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~   67 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGH-------DVTLVARR----GAHLDALNENGLRLEDGEITVPVLAADDPA-ELGPQ   67 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC----hHHHHHHHHcCCcccCCceeecccCCCChh-HcCCC
Confidence            48999999 9999999999999886       89999997    33333221110000 000001112233333 34899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY  141 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~  141 (329)
                      |+||++...                ..+.++++.+..+.+++..|+...|..+....
T Consensus        68 d~vila~k~----------------~~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~  108 (304)
T PRK06522         68 DLVILAVKA----------------YQLPAALPSLAPLLGPDTPVLFLQNGVGHLEE  108 (304)
T ss_pred             CEEEEeccc----------------ccHHHHHHHHhhhcCCCCEEEEecCCCCcHHH
Confidence            999998321                12345556666655567788889998765443

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.14  E-value=1e-05  Score=77.19  Aligned_cols=175  Identities=14%  Similarity=0.076  Sum_probs=96.9

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ||++++||.|+||+|++|++++..|.+.|+       +|+.+|+..   ...+....  +...  -...++.-.....++
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~---~~~~~~~~--~~~~--~~~~Dl~d~~~~~~~   82 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKK---NEHMSEDM--FCHE--FHLVDLRVMENCLKV   82 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEecc---cccccccc--ccce--EEECCCCCHHHHHHH
Confidence            678889999999999999999999999887       899999861   11111000  0000  000111111123345


Q ss_pred             cCCccEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-----HHH--HHHHHCC-C
Q psy9582          81 FKDANIAILIGSFPRKSN---MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-----NTY--ITMKSAP-D  149 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g---~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-----~~~--~~~~~~~-~  149 (329)
                      ++++|+||++++.....+   .........|+.....+++.+++.. .. .+|.+|...-.     ...  -+.+..+ .
T Consensus        83 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         83 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VK-RFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             HhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CC-EEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            678999999886431111   1223346789999999999888763 44 44445432100     000  0000000 1


Q ss_pred             CCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         150 LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       150 ~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      +.|....+.+-....++....++..+++..-++...++|.++
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG  202 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence            122223333444444444445666787766666655677654

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.12  E-value=3.6e-05  Score=75.19  Aligned_cols=112  Identities=13%  Similarity=0.162  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecC-ccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HEN-PITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~-~~~al   81 (329)
                      +.+||.|+||+|++|++++..|++.|.       +|+.+|+.    ..............  +   ++.. ..| ...++
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~----~~~~~~~~~~~~~~--~---~~~~i~~D~~~~~l  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNF----FTGRKENVMHHFSN--P---NFELIRHDVVEPIL  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCC----CccchhhhhhhccC--C---ceEEEECCccChhh
Confidence            568999999999999999999999887       89999875    11111111111000  0   1111 112 23456


Q ss_pred             CCccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .++|+||++|+...  ....+....+..|+....++.+.+++..   ..+|++|.
T Consensus       182 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS  233 (442)
T PLN02206        182 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTST  233 (442)
T ss_pred             cCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECC
Confidence            78999999987532  1122455678899999999999988763   35665554

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=98.12  E-value=4.6e-05  Score=73.80  Aligned_cols=114  Identities=16%  Similarity=0.138  Sum_probs=71.7

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----------Cccce
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----------LLVDV   71 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----------~~~~i   71 (329)
                      |+ .+||+|||. |.+|.++|..|++.|.       +|+.+|++    +++++...........+          ....+
T Consensus         1 m~-~~kI~VIGl-G~~G~~~A~~La~~G~-------~V~~~D~~----~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l   67 (415)
T PRK11064          1 MS-FETISVIGL-GYIGLPTAAAFASRQK-------QVIGVDIN----QHAVDTINRGEIHIVEPDLDMVVKTAVEGGYL   67 (415)
T ss_pred             CC-ccEEEEECc-chhhHHHHHHHHhCCC-------EEEEEeCC----HHHHHHHHCCCCCcCCCCHHHHHHHHhhcCce
Confidence            44 379999998 9999999999999987       89999999    55554321110000000          01223


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchhh
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNT  138 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~  138 (329)
                      ..+++    +++||+||++...|.+...      ..++..+.+.++.+.++.+++.+||..| -|...
T Consensus        68 ~~~~~----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt  125 (415)
T PRK11064         68 RATTT----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGA  125 (415)
T ss_pred             eeecc----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence            34332    3589999999877754321      1233455666677777665677776665 36543

>PLN02650 dihydroflavonol-4-reductase

Probab=98.11  E-value=2.5e-05  Score=73.80  Aligned_cols=118  Identities=14%  Similarity=0.172  Sum_probs=74.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-c----cCC-ccceEeecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-I----FPL-LVDVSVHEN   76 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~----~~~-~~~i~~~~~   76 (329)
                      +.+++|.|+||+|++|++++..|+..|.       +|++++++    ...+... .++... .    ..+ ..++.-...
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~----~~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~   70 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRD----PANVKKV-KHLLDLPGATTRLTLWKADLAVEGS   70 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcC----cchhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence            4568999999999999999999999887       89988887    2222211 111110 0    000 012211123


Q ss_pred             cccccCCccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 PITAFKDANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..++++++|+||++|+.......+ ....+..|+.....+.+.+.+.. .-..||++|
T Consensus        71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~S  127 (351)
T PLN02650         71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTS  127 (351)
T ss_pred             HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEec
Confidence            456788999999998753211112 23567889999999999988753 223555554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.09  E-value=2e-05  Score=73.82  Aligned_cols=121  Identities=14%  Similarity=0.118  Sum_probs=75.4

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~   79 (329)
                      ||+ .++|.|+||+|++|++++..|+..+...     +|+++|++    .........++......+ ..++.-..+..+
T Consensus         1 ~~~-~k~vLVTGatG~IG~~l~~~L~~~g~~~-----~V~~~~r~----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~   70 (324)
T TIGR03589         1 MFN-NKSILITGGTGSFGKAFISRLLENYNPK-----KIIIYSRD----ELKQWEMQQKFPAPCLRFFIGDVRDKERLTR   70 (324)
T ss_pred             CcC-CCEEEEeCCCCHHHHHHHHHHHHhCCCc-----EEEEEcCC----hhHHHHHHHHhCCCcEEEEEccCCCHHHHHH
Confidence            443 5789999999999999999999875211     79999987    222221111111100000 012221223455


Q ss_pred             ccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          80 AFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++++.|+||++++....+  ..+..+.+..|+.....+.+.+.+.. .. .||++|
T Consensus        71 ~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~-~iV~~S  124 (324)
T TIGR03589        71 ALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VK-RVVALS  124 (324)
T ss_pred             HHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence            678899999998864322  23455678899999999999988753 33 455554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=98.07  E-value=1.3e-05  Score=75.53  Aligned_cols=104  Identities=19%  Similarity=0.209  Sum_probs=65.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh---hhhhccc-C---CccceEeecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM---EIEDCIF-P---LLVDVSVHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~---dl~~~~~-~---~~~~i~~~~~~~   78 (329)
                      +||+|||+ |.+|+.+|..|.+.|.       +|.++|++    .. .+....   ...+... .   ...++..+++. 
T Consensus         3 mkI~IiG~-G~mG~~~A~~L~~~G~-------~V~~~~r~----~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-   68 (341)
T PRK08229          3 ARICVLGA-GSIGCYLGGRLAAAGA-------DVTLIGRA----RI-GDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-   68 (341)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhcCC-------cEEEEecH----HH-HHHHHhcCceeecCCCcceecccceeEeccCh-
Confidence            47999999 9999999999999987       89999987    21 111110   0000000 0   01234445554 


Q ss_pred             cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          79 TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      ++++++|+||++...+.                ..++++.+....+++.+|+..+|..+..
T Consensus        69 ~~~~~~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~  113 (341)
T PRK08229         69 AALATADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA  113 (341)
T ss_pred             hhccCCCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence            67899999999843211                1234455555555778888888976643

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.06  E-value=2.4e-05  Score=77.72  Aligned_cols=118  Identities=13%  Similarity=0.098  Sum_probs=74.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-----cc----CC---ccc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-----IF----PL---LVD   70 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-----~~----~~---~~~   70 (329)
                      ++.+.|.|+||+|++|..++..|+..|.       +|++++++    .+++......+.+.     ..    ..   ..+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gD  146 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRS----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVECD  146 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHhhhhccccccccccCceEEEEec
Confidence            3456899999999999999999999887       89999998    44443332222110     00    00   011


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.-..+..+++.++|+||+++|............+..|......+++.+.+.. -. .||++|
T Consensus       147 LtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-Vg-RIV~VS  207 (576)
T PLN03209        147 LEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VN-HFILVT  207 (576)
T ss_pred             CCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CC-EEEEEc
Confidence            11112334568899999999876543222233345678888888888887753 34 444444

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.06  E-value=2.6e-05  Score=72.60  Aligned_cols=80  Identities=11%  Similarity=0.143  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..+||+|||+ |.+|++++..|...|+       +|++||++    ..                       .+..+++++
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~-------~V~~~~r~----~~-----------------------~~~~~~~~~   47 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGH-------RVRVWSRR----SG-----------------------LSLAAVLAD   47 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC-------EEEEEeCC----CC-----------------------CCHHHHHhc
Confidence            4589999998 9999999999999987       89999998    21                       123467789


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-cCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV-ASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~-~~p~a~viv~tN  134 (329)
                      +|+||++.  |.              ..++++++.+..+ ..++++++..|+
T Consensus        48 advvi~~v--p~--------------~~~~~v~~~l~~~~~~~~~ivi~~s~   83 (308)
T PRK14619         48 ADVIVSAV--SM--------------KGVRPVAEQVQALNLPPETIIVTATK   83 (308)
T ss_pred             CCEEEEEC--Ch--------------HHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence            99999983  21              3456666667643 346778888887

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=98.06  E-value=2e-05  Score=72.88  Aligned_cols=106  Identities=17%  Similarity=0.137  Sum_probs=64.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh---hhhhcccCCccceEeecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM---EIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~---dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      |||+|+|+ |.+|..++..|.+.|.       +|.++++.    + +++....   .+..............++..++.+
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~-------~V~~~~r~----~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   67 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGR-------DVTFLVRP----K-RAKALRERGLVIRSDHGDAVVPGPVITDPEELTG   67 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCC-------ceEEEecH----H-HHHHHHhCCeEEEeCCCeEEecceeecCHHHccC
Confidence            58999999 9999999999999886       89999983    1 1221110   111000000011222344444568


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                      ++|+||++...                ..+.++++.+..+..++..|+.+.|..+...
T Consensus        68 ~~d~vilavk~----------------~~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~  109 (305)
T PRK12921         68 PFDLVILAVKA----------------YQLDAAIPDLKPLVGEDTVIIPLQNGIGQLE  109 (305)
T ss_pred             CCCEEEEEecc----------------cCHHHHHHHHHhhcCCCCEEEEeeCCCChHH
Confidence            99999998322                1244455566665456778888899876443

>PLN02427 UDP-apiose/xylose synthase

Probab=98.05  E-value=1.7e-05  Score=75.98  Aligned_cols=116  Identities=16%  Similarity=0.173  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhh--c--ccCCc-cceEeecCc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED--C--IFPLL-VDVSVHENP   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~--~--~~~~~-~~i~~~~~~   77 (329)
                      +++||.|+||+|++|++++..|++. +.       +|+.+|++    ..+.... .....  .  ...+. .++.-..+.
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-------~V~~l~r~----~~~~~~l-~~~~~~~~~~~~~~~~~Dl~d~~~l   80 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPH-------KVLALDVY----NDKIKHL-LEPDTVPWSGRIQFHRINIKHDSRL   80 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCC-------EEEEEecC----chhhhhh-hccccccCCCCeEEEEcCCCChHHH
Confidence            3579999999999999999999987 45       89999986    2222111 00000  0  00000 111111234


Q ss_pred             ccccCCccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITAFKDANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .++++++|+||++|+....  ......+.+..|+....++.+..++..   ..+|.+|.
T Consensus        81 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS  136 (386)
T PLN02427         81 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFST  136 (386)
T ss_pred             HHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEee
Confidence            5678899999999875321  112233456678888888888877653   35555553

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.04  E-value=2.8e-05  Score=73.51  Aligned_cols=176  Identities=13%  Similarity=0.075  Sum_probs=96.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-C--C-ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-P--L-LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~--~-~~~i~~~~~~~~a   80 (329)
                      ++||.|+||+|++|++++..|+..+.       +|+.+|+........+........+... .  + ..++.-...+.+.
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            47999999999999999999999886       8999998621100001100000000000 0  0 0111111123345


Q ss_pred             cCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh---HHHHHHHHCCCCCCCcE
Q psy9582          81 FKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT---NTYITMKSAPDLSYKNF  155 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~---~~~~~~~~~~~~~~~~i  155 (329)
                      ++++|+||++|+....+  ..........|+....++.+.+++.. .. .++.+|-..-.   -.....+..+. .|...
T Consensus        88 ~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~-~~v~~SS~~vyg~~~~~~~~e~~~~-~p~~~  164 (348)
T PRK15181         88 CKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VS-SFTYAASSSTYGDHPDLPKIEERIG-RPLSP  164 (348)
T ss_pred             hhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEeechHhhCCCCCCCCCCCCCC-CCCCh
Confidence            78999999998754321  23345567899999999999998863 33 44444421000   00000111111 12234


Q ss_pred             EEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         156 TAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       156 ~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      .+.+-+...++....++..+++...++...+.|.+
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRR  199 (348)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcC
Confidence            44454444445445566668887777776677864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.03  E-value=4.5e-05  Score=70.85  Aligned_cols=107  Identities=10%  Similarity=-0.021  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cC---C-ccceEeecCc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FP---L-LVDVSVHENP   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~---~-~~~i~~~~~~   77 (329)
                      +.++|.|+||+|++|++++..|+..|.       +|++++++.    .... ....+....  .+   + ..++.-....
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~----~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDP----NDPK-KTEHLLALDGAKERLHLFKANLLEEGSF   70 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCC----Cchh-hHHHHHhccCCCCceEEEeccccCcchH
Confidence            457999999999999999999999987       899888872    2111 111111000  00   0 0122222234


Q ss_pred             ccccCCccEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          78 ITAFKDANIAILIGSFPRKSN-MERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g-~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      .++++++|+||++++...... ......+..|+.....+.+.+.+.
T Consensus        71 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~  116 (322)
T PLN02662         71 DSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV  116 (322)
T ss_pred             HHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC
Confidence            567889999999987543211 222356778999999999988775

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=98.03  E-value=4.4e-05  Score=68.39  Aligned_cols=102  Identities=20%  Similarity=0.185  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ||+ .+||+|||+ |++|.+++..|+..+....   .++.+++++.   .++++    ++.+.   +  .+..+.+..+.
T Consensus         1 ~m~-~~kI~iIG~-G~mg~ala~~l~~~~~~~~---~~i~~~~~~~---~~~~~----~~~~~---~--~~~~~~~~~~~   63 (245)
T PRK07634          1 MLK-KHRILFIGA-GRMAEAIFSGLLKTSKEYI---EEIIVSNRSN---VEKLD----QLQAR---Y--NVSTTTDWKQH   63 (245)
T ss_pred             CCC-CCeEEEECc-CHHHHHHHHHHHhCCCCCc---CeEEEECCCC---HHHHH----HHHHH---c--CcEEeCChHHH
Confidence            664 589999998 9999999999987753210   0477787641   23333    22221   1  23345666778


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ++++|+||++.  |.              ...+++++++..+. ++..||.++.-+
T Consensus        64 ~~~~DiViiav--p~--------------~~~~~v~~~l~~~~-~~~~vis~~~gi  102 (245)
T PRK07634         64 VTSVDTIVLAM--PP--------------SAHEELLAELSPLL-SNQLVVTVAAGI  102 (245)
T ss_pred             HhcCCEEEEec--CH--------------HHHHHHHHHHHhhc-cCCEEEEECCCC
Confidence            89999999972  11              23455555555543 344666665543

>PRK07680 late competence protein ComER; Validated

Probab=98.02  E-value=3.9e-05  Score=70.10  Aligned_cols=100  Identities=10%  Similarity=0.151  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|.+++..|...+.+..   .+|.++|++    .++++.    +.+.   + ..+..+.+..+.++++|
T Consensus         1 m~I~iIG~-G~mG~ala~~L~~~g~~~~---~~v~v~~r~----~~~~~~----~~~~---~-~g~~~~~~~~~~~~~aD   64 (273)
T PRK07680          1 MNIGFIGT-GNMGTILIEAFLESGAVKP---SQLTITNRT----PAKAYH----IKER---Y-PGIHVAKTIEEVISQSD   64 (273)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCc---ceEEEECCC----HHHHHH----HHHH---c-CCeEEECCHHHHHHhCC
Confidence            47999998 9999999999998874321   179999998    443332    2111   0 12445556667789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +||++.  +  +            ..+.++++.+..+..++.+|+.++|++.
T Consensus        65 iVilav--~--p------------~~~~~vl~~l~~~l~~~~~iis~~ag~~  100 (273)
T PRK07680         65 LIFICV--K--P------------LDIYPLLQKLAPHLTDEHCLVSITSPIS  100 (273)
T ss_pred             EEEEec--C--H------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            999983  1  1            2345555666655446778888888764

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.97  E-value=6.4e-05  Score=68.69  Aligned_cols=95  Identities=18%  Similarity=0.287  Sum_probs=61.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||+ |++|++++..|++.+.+..+   +|..+|++    .++++.    +.+.   +  .+..+.+..+.+++||
T Consensus         3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~---~I~v~~r~----~~~~~~----l~~~---~--g~~~~~~~~e~~~~aD   65 (272)
T PRK12491          3 KQIGFIGC-GNMGIAMIGGMINKNIVSPD---QIICSDLN----VSNLKN----ASDK---Y--GITITTNNNEVANSAD   65 (272)
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCCCCc---eEEEECCC----HHHHHH----HHHh---c--CcEEeCCcHHHHhhCC
Confidence            58999998 99999999999988764322   79999998    444332    2211   0  1334456667789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++..    |            ..+.++.+.+..+.+++.+||-+.
T Consensus        66 iIiLavk----P------------~~~~~vl~~l~~~~~~~~lvISi~   97 (272)
T PRK12491         66 ILILSIK----P------------DLYSSVINQIKDQIKNDVIVVTIA   97 (272)
T ss_pred             EEEEEeC----h------------HHHHHHHHHHHHhhcCCcEEEEeC
Confidence            9999732    1            244455555555444555555443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.94  E-value=9.4e-05  Score=72.12  Aligned_cols=93  Identities=22%  Similarity=0.228  Sum_probs=62.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+||||+|.+|.+++..|...|.       +|.++|++    .+.+...+.++         .+..+++..+++.+||
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~----~~~~~~~a~~~---------gv~~~~~~~e~~~~aD   60 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRD----PKKGKEVAKEL---------GVEYANDNIDAAKDAD   60 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECC----hHHHHHHHHHc---------CCeeccCHHHHhccCC
Confidence            4899999669999999999999886       89999998    33322221111         1234456667889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +||++...                ..+.++++.+..+.+++++|+-++.
T Consensus        61 vVIlavp~----------------~~~~~vl~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         61 IVIISVPI----------------NVTEDVIKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             EEEEecCH----------------HHHHHHHHHHHhhCCCCCEEEEccc
Confidence            99998321                1233444555555557778777775

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=97.94  E-value=6.6e-05  Score=69.97  Aligned_cols=111  Identities=19%  Similarity=0.166  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEeecCccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~   79 (329)
                      |-+..+||+|+|+ |.+|+.+|..|...|.       +|.+++++.   .+........+...... ....+.+.++ .+
T Consensus         1 ~~~~~m~I~IiG~-GaiG~~lA~~L~~~g~-------~V~~~~r~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~   68 (313)
T PRK06249          1 MDSETPRIGIIGT-GAIGGFYGAMLARAGF-------DVHFLLRSD---YEAVRENGLQVDSVHGDFHLPPVQAYRS-AE   68 (313)
T ss_pred             CCCcCcEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEEeCC---HHHHHhCCeEEEeCCCCeeecCceEEcc-hh
Confidence            4456689999999 9999999999999886       899999872   11111100011100000 0112333333 34


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      +...+|+||++.-..                ...+.++.+....++++.++...|=.+..
T Consensus        69 ~~~~~D~vilavK~~----------------~~~~~~~~l~~~~~~~~~iv~lqNG~~~~  112 (313)
T PRK06249         69 DMPPCDWVLVGLKTT----------------ANALLAPLIPQVAAPDAKVLLLQNGLGVE  112 (313)
T ss_pred             hcCCCCEEEEEecCC----------------ChHhHHHHHhhhcCCCCEEEEecCCCCcH
Confidence            577899999983211                12344555555555788888888876643

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=97.92  E-value=7.9e-05  Score=72.35  Aligned_cols=110  Identities=15%  Similarity=0.197  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEe
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSV   73 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~   73 (329)
                      .+|||+|||- |.||..+|..|+.+ +       +|+.||++    +++.+..    .....+.          ...+..
T Consensus         5 ~~mkI~vIGl-GyvGlpmA~~la~~-~-------~V~g~D~~----~~~ve~l----~~G~~~~~e~~~~~l~~~g~l~~   67 (425)
T PRK15182          5 DEVKIAIIGL-GYVGLPLAVEFGKS-R-------QVVGFDVN----KKRILEL----KNGVDVNLETTEEELREARYLKF   67 (425)
T ss_pred             CCCeEEEECc-CcchHHHHHHHhcC-C-------EEEEEeCC----HHHHHHH----HCcCCCCCCCCHHHHHhhCCeeE
Confidence            4689999998 99999999998774 4       89999999    5554432    2111110          124556


Q ss_pred             ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchh
Q psy9582          74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVN  137 (329)
Q Consensus        74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~  137 (329)
                      +++ .+++++||++|++.+.|.+...+      .++..+..-.+.|.++.+++.+||+-| -|..
T Consensus        68 t~~-~~~~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pg  125 (425)
T PRK15182         68 TSE-IEKIKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPG  125 (425)
T ss_pred             EeC-HHHHcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence            665 46799999999998888643221      122344444455555554566666654 4544

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.91  E-value=5.2e-05  Score=70.66  Aligned_cols=108  Identities=14%  Similarity=0.137  Sum_probs=69.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      |||.|+||+|++|++++..|++.|+       +|+.++++    .++..    .+.+..... ..++.-..++.++++++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~----~~~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~   65 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRN----LRKAS----FLKEWGAELVYGDLSLPETLPPSFKGV   65 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcC----hHHhh----hHhhcCCEEEECCCCCHHHHHHHHCCC
Confidence            4899999999999999999999887       89999987    22221    111110000 01222223456789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||++++....   ........|......+++.+++.. .. .+|.+|
T Consensus        66 d~Vi~~~~~~~~---~~~~~~~~~~~~~~~l~~aa~~~g-vk-r~I~~S  109 (317)
T CHL00194         66 TAIIDASTSRPS---DLYNAKQIDWDGKLALIEAAKAAK-IK-RFIFFS  109 (317)
T ss_pred             CEEEECCCCCCC---CccchhhhhHHHHHHHHHHHHHcC-CC-EEEEec
Confidence            999998653221   112344567788888888888864 44 444444

>PLN02214 cinnamoyl-CoA reductase

Probab=97.90  E-value=0.00013  Score=68.87  Aligned_cols=113  Identities=14%  Similarity=0.057  Sum_probs=73.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-hHhhhhhcc--cCC-ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-VIMEIEDCI--FPL-LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-~~~dl~~~~--~~~-~~~i~~~~~~~~a   80 (329)
                      .++|.|+||+|++|++++..|++.|.       +|+.++++    .+.... ....+....  ..+ ..++.-..+..++
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   78 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRN----PDDPKNTHLRELEGGKERLILCKADLQDYEALKAA   78 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCC----chhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHH
Confidence            46899999999999999999999987       89999887    222111 111111100  000 0122222334567


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++++|+||++++...   ......+..|+.....+.+.+.+.. .. .+|++|
T Consensus        79 ~~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~-v~-r~V~~S  126 (342)
T PLN02214         79 IDGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAK-VK-RVVITS  126 (342)
T ss_pred             HhcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcC-CC-EEEEec
Confidence            889999999987542   2345667889999999999988763 34 444443

>PLN00198 anthocyanidin reductase; Provisional

Probab=97.90  E-value=0.00013  Score=68.45  Aligned_cols=117  Identities=9%  Similarity=0.085  Sum_probs=70.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH--hhhhhcc-cCC-ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI--MEIEDCI-FPL-LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~--~dl~~~~-~~~-~~~i~~~~~~~~a   80 (329)
                      +++|.|+||+|++|++++..|++.|.       +|++++++    ........  ..+.... ... ..+++-..+..+.
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRD----PENQKKIAHLRALQELGDLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECC----CCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHH
Confidence            47899999999999999999999887       88877776    22111100  0111000 000 0112111233456


Q ss_pred             cCCccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          81 FKDANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++++|+||++|+.......+ ....+..|+.....+.+.+.+..... .+|++|
T Consensus        78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~-~~v~~S  130 (338)
T PLN00198         78 IAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVK-RVILTS  130 (338)
T ss_pred             HhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEee
Confidence            78999999998743222122 23456789999999999988763223 444443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=97.89  E-value=0.00015  Score=67.59  Aligned_cols=118  Identities=14%  Similarity=0.046  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-c----cCC-ccceEeecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-I----FPL-LVDVSVHEN   76 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~----~~~-~~~i~~~~~   76 (329)
                      ...++|.|+||+|++|++++..|+..|.       +|++.+++    ....... ..+... .    ..+ ..++.-..+
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~   70 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRD----PKDRKKT-DHLLALDGAKERLKLFKADLLDEGS   70 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcC----CcchhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence            3458999999999999999999999887       88888877    2222111 111100 0    000 012221223


Q ss_pred             cccccCCccEEEEeCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 PITAFKDANIAILIGSFPRKS-N-MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~-g-~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..+++++.|+||++++..... . ......+..|+.....+.+.+.+.. .-..||++|
T Consensus        71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~S  128 (325)
T PLN02989         71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTS  128 (325)
T ss_pred             HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEec
Confidence            345677899999998853211 1 2234567789999999999887753 223455544

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.88  E-value=6.4e-05  Score=68.91  Aligned_cols=90  Identities=18%  Similarity=0.225  Sum_probs=56.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|.+++..|...|.       +|.++|++    .+.++. ..+.   .  .   +....+..+++++||
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~-------~V~~~d~~----~~~~~~-a~~~---g--~---~~~~~~~~~~~~~aD   59 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGH-------TVYGVSRR----ESTCER-AIER---G--L---VDEASTDLSLLKDCD   59 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHH-HHHC---C--C---cccccCCHhHhcCCC
Confidence            47999998 9999999999998886       89999998    433331 1111   1  0   111122245789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV  132 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~  132 (329)
                      +||++..  .              ..+.++.+.+..+.+++++|..+
T Consensus        60 lVilavp--~--------------~~~~~~~~~l~~~l~~~~ii~d~   90 (279)
T PRK07417         60 LVILALP--I--------------GLLLPPSEQLIPALPPEAIVTDV   90 (279)
T ss_pred             EEEEcCC--H--------------HHHHHHHHHHHHhCCCCcEEEeC
Confidence            9999832  1              12333445565555566655443

>PLN02778 3,5-epimerase/4-reductase

Probab=97.86  E-value=0.00026  Score=65.55  Aligned_cols=89  Identities=11%  Similarity=0.069  Sum_probs=61.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||.|+||+|++|++++..|...|.       +|++...+    .........++.                  . .+.
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~----~~~~~~v~~~l~------------------~-~~~   58 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGR----LENRASLEADID------------------A-VKP   58 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCc----cCCHHHHHHHHH------------------h-cCC
Confidence            48999999999999999999999887       77655433    111111111111                  0 268


Q ss_pred             cEEEEeCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          85 NIAILIGSFPRKSN-----MERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        85 DiVi~~~g~~~~~g-----~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      |+||++|+....+.     ....+.+..|+.....+++.+++..
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g  102 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG  102 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999988643221     2345677899999999999998863

>PLN02240 UDP-glucose 4-epimerase

Probab=97.86  E-value=0.00012  Score=68.92  Aligned_cols=124  Identities=15%  Similarity=0.157  Sum_probs=72.4

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-c--cCC-ccceEeecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-I--FPL-LVDVSVHEN   76 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~--~~~-~~~i~~~~~   76 (329)
                      ||.+.+||.|+||+|++|++++..|++.+.       +|+++|+.......... ...+.... .  ... ..++.-..+
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~   72 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDNSSEEALR-RVKELAGDLGDNLVFHKVDLRDKEA   72 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCcchHHHHH-HHHHhhcccCccceEEecCcCCHHH
Confidence            566668999999999999999999998886       89999875110000011 11111100 0  000 011111112


Q ss_pred             cccccC--CccEEEEeCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 PITAFK--DANIAILIGSFPRK-SN-MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al~--~aDiVi~~~g~~~~-~g-~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..++++  +.|+||++++.... .. ......+..|+.....+++.+.+.. .. .++.+|.
T Consensus        73 l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss  132 (352)
T PLN02240         73 LEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CK-KLVFSSS  132 (352)
T ss_pred             HHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcc
Confidence            222333  68999999875421 11 2345677889999999999887752 33 4455553

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.86  E-value=0.00018  Score=67.03  Aligned_cols=110  Identities=13%  Similarity=-0.031  Sum_probs=68.0

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cCC----ccceEee
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FPL----LVDVSVH   74 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~~----~~~i~~~   74 (329)
                      |....++|.|+||+|++|++++..|++.|.       +|++..++    ..... ....+....  .+.    ..++.-.
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~   68 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRD----LTDRK-KTEHLLALDGAKERLKLFKADLLEE   68 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----CcchH-HHHHHHhccCCCCceEEEecCCCCc
Confidence            334568999999999999999999999887       78876665    22111 111111100  000    0122212


Q ss_pred             cCcccccCCccEEEEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          75 ENPITAFKDANIAILIGSFPRKS-NMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~-g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      ....++++++|+||++|+..... .....+++..|+.....+.+.+.+.
T Consensus        69 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~  117 (322)
T PLN02986         69 SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET  117 (322)
T ss_pred             chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence            23455678999999998753211 1122345678999999999888764

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.86  E-value=7.5e-05  Score=67.86  Aligned_cols=95  Identities=16%  Similarity=0.189  Sum_probs=62.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|+.++..|...+..    +.+|.++|++    .++++.    +.+.   +  .+.++.+..+.++++|
T Consensus         3 m~I~iIG~-G~mG~~la~~l~~~g~~----~~~v~v~~r~----~~~~~~----~~~~---~--g~~~~~~~~~~~~~ad   64 (267)
T PRK11880          3 KKIGFIGG-GNMASAIIGGLLASGVP----AKDIIVSDPS----PEKRAA----LAEE---Y--GVRAATDNQEAAQEAD   64 (267)
T ss_pred             CEEEEEec-hHHHHHHHHHHHhCCCC----cceEEEEcCC----HHHHHH----HHHh---c--CCeecCChHHHHhcCC
Confidence            47999998 99999999999987631    1179999998    443332    2211   0  1233455566788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++.  +.              ..++++.+.+..+.  +..|+.++|-+
T Consensus        65 vVil~v--~~--------------~~~~~v~~~l~~~~--~~~vvs~~~gi   97 (267)
T PRK11880         65 VVVLAV--KP--------------QVMEEVLSELKGQL--DKLVVSIAAGV   97 (267)
T ss_pred             EEEEEc--CH--------------HHHHHHHHHHHhhc--CCEEEEecCCC
Confidence            999973  11              34566666666553  44667777754

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.85  E-value=0.00014  Score=66.57  Aligned_cols=99  Identities=20%  Similarity=0.199  Sum_probs=62.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||+ |.+|++++..|+..+...   +.+|.++|++.   +++++    ++...   +  .++++.+..+++++||
T Consensus         4 mkI~~IG~-G~mG~aia~~l~~~g~~~---~~~v~v~~r~~---~~~~~----~l~~~---~--g~~~~~~~~e~~~~aD   67 (279)
T PRK07679          4 QNISFLGA-GSIAEAIIGGLLHANVVK---GEQITVSNRSN---ETRLQ----ELHQK---Y--GVKGTHNKKELLTDAN   67 (279)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCC---cceEEEECCCC---HHHHH----HHHHh---c--CceEeCCHHHHHhcCC
Confidence            79999998 999999999999887322   12799999861   22333    22211   1  1344556667789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++..    |            ..+.++++.+..+..++.+||.+.+-+
T Consensus        68 vVilav~----p------------~~~~~vl~~l~~~~~~~~liIs~~aGi  102 (279)
T PRK07679         68 ILFLAMK----P------------KDVAEALIPFKEYIHNNQLIISLLAGV  102 (279)
T ss_pred             EEEEEeC----H------------HHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence            9999731    1            123334455555444666777764443

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.85  E-value=0.0001  Score=59.23  Aligned_cols=103  Identities=12%  Similarity=0.110  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |++|.+|+..|...|+       +|.-+-...   .+..    ..+.+.    .....+ .+..+.+++|
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~-------~v~~v~srs---~~sa----~~a~~~----~~~~~~-~~~~~~~~~a   69 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGH-------EVVGVYSRS---PASA----ERAAAF----IGAGAI-LDLEEILRDA   69 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTS-------EEEEESSCH---H-HH----HHHHC------TT------TTGGGCC-
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEEeCC---cccc----cccccc----cccccc-cccccccccC
Confidence            489999999 9999999999999887       666554330   2111    122221    112222 2456789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh--cCCCeEEEEEc--CchhhHHHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV--ASRDVKVLVVG--NPVNTNTYIT  143 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~--~~p~a~viv~t--NP~~~~~~~~  143 (329)
                      |++|++.     |+           ..+.+++++|..+  ..|+.+|+-.|  -+++++..+-
T Consensus        70 Dlv~iav-----pD-----------daI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~~  116 (127)
T PF10727_consen   70 DLVFIAV-----PD-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPAR  116 (127)
T ss_dssp             SEEEE-S------C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHHH
T ss_pred             CEEEEEe-----ch-----------HHHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhHH
Confidence            9999982     11           3677888888876  33565655554  5777877754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.84  E-value=9.8e-05  Score=68.53  Aligned_cols=112  Identities=13%  Similarity=0.108  Sum_probs=72.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      +||.|+||+|++|++++..|++.|.       +|+++|++    .+....    +.+..... ..++.-..+..++++++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRP----TSDRRN----LEGLDVEIVEGDLRDPASLRKAVAGC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEec----Cccccc----cccCCceEEEeeCCCHHHHHHHHhCC
Confidence            4799999999999999999999886       89999997    222211    11100000 01111112345678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+||++++.......+.......|+.....+++.+.+.. .. .+|+.|.
T Consensus        66 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS  113 (328)
T TIGR03466        66 RALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VE-RVVYTSS  113 (328)
T ss_pred             CEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEec
Confidence            999998764322233456677889999999999888753 33 4444543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases

Probab=97.83  E-value=0.00013  Score=65.06  Aligned_cols=71  Identities=11%  Similarity=0.168  Sum_probs=53.5

Q ss_pred             HHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9582         253 HIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI  324 (329)
Q Consensus       253 ~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~  324 (329)
                      .++++|.+|. .++.++|.++|. -++|+|.++++||+| ++|+.++.. .+|++..+++++.....-+-.++++
T Consensus       141 ~~i~~i~~~~~~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa  214 (232)
T PF11975_consen  141 AAIEAIYNDKPKRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAA  214 (232)
T ss_dssp             HHHHHHHHSSEEEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCeEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            4455668887 999999999998 799999999999999 999999877 9999999998877665555555544

It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.

>PLN02688 pyrroline-5-carboxylate reductase

Probab=97.81  E-value=0.00017  Score=65.51  Aligned_cols=97  Identities=15%  Similarity=0.249  Sum_probs=63.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      |||++||. |.+|++++..|++.+...   +.+|+++ |++    .++.+    .+.+.      .+.+..+..++++++
T Consensus         1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~----~~~~~----~~~~~------g~~~~~~~~e~~~~a   62 (266)
T PLN02688          1 FRVGFIGA-GKMAEAIARGLVASGVVP---PSRISTADDSN----PARRD----VFQSL------GVKTAASNTEVVKSS   62 (266)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCC---cceEEEEeCCC----HHHHH----HHHHc------CCEEeCChHHHHhcC
Confidence            57999998 999999999999887532   1278888 777    44332    12211      234455666778899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      |+||++. .|               +.++++.+.+..+..++.+||..++..
T Consensus        63 DvVil~v-~~---------------~~~~~vl~~l~~~~~~~~~iIs~~~g~   98 (266)
T PLN02688         63 DVIILAV-KP---------------QVVKDVLTELRPLLSKDKLLVSVAAGI   98 (266)
T ss_pred             CEEEEEE-Cc---------------HHHHHHHHHHHhhcCCCCEEEEecCCC
Confidence            9999984 11               244555555555544666666665543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.80  E-value=6.6e-05  Score=63.81  Aligned_cols=97  Identities=18%  Similarity=0.136  Sum_probs=65.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEE
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIA   87 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiV   87 (329)
                      |+|+||+|++|+.++..|++.+.       +|+++-++    .+++.. ...+...    ..++.-.....++++++|.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~----~~~~~~-~~~~~~~----~~d~~d~~~~~~al~~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRS----PSKAED-SPGVEII----QGDLFDPDSVKAALKGADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESS----GGGHHH-CTTEEEE----ESCTTCHHHHHHHHTTSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-------EEEEEecC----chhccc-ccccccc----eeeehhhhhhhhhhhhcchh
Confidence            78999999999999999999996       99999998    444432 0111100    01111113456789999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          88 ILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        88 i~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |.+.|.+.+           +...++.+.+.+++.. .. .++++|
T Consensus        65 i~~~~~~~~-----------~~~~~~~~~~a~~~~~-~~-~~v~~s   97 (183)
T PF13460_consen   65 IHAAGPPPK-----------DVDAAKNIIEAAKKAG-VK-RVVYLS   97 (183)
T ss_dssp             EECCHSTTT-----------HHHHHHHHHHHHHHTT-SS-EEEEEE
T ss_pred             hhhhhhhcc-----------cccccccccccccccc-cc-cceeee
Confidence            999765543           1678888888888863 44 444443

...

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.80  E-value=0.00017  Score=66.39  Aligned_cols=167  Identities=16%  Similarity=0.175  Sum_probs=93.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc-c
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA-N   85 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a-D   85 (329)
                      +|.|+||+|++|++++..|++.|.       +|+.+|+..    ........+.....    ..++-.....+.+++. |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~~~~~~----~d~~~~~~~~~~~~~~~d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLR----DGLDPLLSGVEFVV----LDLTDRDLVDELAKGVPD   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCC----ccccccccccceee----ecccchHHHHHHHhcCCC
Confidence            499999999999999999999887       899999872    22211100000000    0111112234455666 9


Q ss_pred             EEEEeCCCCCCCCCCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH----HHHHH-CCCCCCCcEEE
Q psy9582          86 IAILIGSFPRKSNMER---SELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY----ITMKS-APDLSYKNFTA  157 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~----~~~~~-~~~~~~~~i~~  157 (329)
                      .||++++....++..+   .+....|+...+++++...+.  .-..++..|.....-..    .+.+. .+..| ..--+
T Consensus        67 ~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p-~~~Yg  143 (314)
T COG0451          67 AVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP-LNPYG  143 (314)
T ss_pred             EEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCCCCCCCcccccCCCCC-CCHHH
Confidence            9999987655433322   357889999999999999983  22244443321111000    11111 11111 11234


Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      .+-+...+.-...++..+++..-++...++|...
T Consensus       144 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~  177 (314)
T COG0451         144 VSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGD  177 (314)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence            4544444444445555577777777655677543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.79  E-value=8.7e-05  Score=66.63  Aligned_cols=121  Identities=20%  Similarity=0.213  Sum_probs=68.6

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeec
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHE   75 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~   75 (329)
                      ||++  .+++.|+||+|++|++++..|++.|.       +|++++++    ++..+....++.+......   .++.-..
T Consensus         1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   69 (262)
T PRK13394          1 MMSNLNGKTAVVTGAASGIGKEIALELARAGA-------AVAIADLN----QDGANAVADEINKAGGKAIGVAMDVTNED   69 (262)
T ss_pred             CcccCCCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCC----hHHHHHHHHHHHhcCceEEEEECCCCCHH
Confidence            6653  47899999999999999999999987       89999998    4333333333332210000   0110000


Q ss_pred             Ccc-------cccCCccEEEEeCCCCCC-C--C---CCHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPI-------TAFKDANIAILIGSFPRK-S--N---MERSELLAINSSI----FIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~-------~al~~aDiVi~~~g~~~~-~--g---~~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ...       +.....|+||+++|.... +  .   ......+..|+..    .+.+.+.+.+.. +.+.|+++|
T Consensus        70 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~s  143 (262)
T PRK13394         70 AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMG  143 (262)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEc
Confidence            111       122457999999886421 1  1   1233345566665    555666662222 344555555

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.78  E-value=0.0003  Score=63.58  Aligned_cols=118  Identities=18%  Similarity=0.163  Sum_probs=77.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC-c--cceEeec---
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL-L--VDVSVHE---   75 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~-~--~~i~~~~---   75 (329)
                      ++...+.|+|||+++|..+|..|+.+|.       .|.|+.++    +++|+..+.++++... .. .  .+++-..   
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~----~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~   72 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARR----EDKLEALAKELEDKTGVEVEVIPADLSDPEALE   72 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc----HHHHHHHHHHHHHhhCceEEEEECcCCChhHHH
Confidence            4557999999999999999999999998       89999999    8889988888876430 00 0  1111111   


Q ss_pred             ----CcccccCCccEEEEeCCCCCCC------CCCHHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 ----NPITAFKDANIAILIGSFPRKS------NMERSELLAINSSIF----IEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ----~~~~al~~aDiVi~~~g~~~~~------g~~~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~t  133 (329)
                          .+.+.....|+.|..||...-.      ..+-.+++.-|+-..    +.+.+.|.+.  ..+-||+++
T Consensus        73 ~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~--~~G~IiNI~  142 (265)
T COG0300          73 RLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER--GAGHIINIG  142 (265)
T ss_pred             HHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCceEEEEe
Confidence                1122223689999999875321      123345666676544    4455666664  245566664

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=97.76  E-value=0.00017  Score=68.04  Aligned_cols=118  Identities=12%  Similarity=0.062  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccC-CccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFP-LLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~-~~~~i~~~~~~~~al~   82 (329)
                      .++|.|+||+|++|++++..|++.|.       +|+.+|++.    .........+... ... ...++.-..+..+.++
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   72 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDP----PTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIA   72 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCC----ccchhHHHHHhhcCCceEEEccCCCHHHHHHHHh
Confidence            37899999999999999999999887       899999872    2211111111100 000 0011111112233444


Q ss_pred             C--ccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 D--ANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~--aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +  .|+||++++.+..  ...+....+..|+.....+++.+.+.. ....+|++|.
T Consensus        73 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS  127 (349)
T TIGR02622        73 EFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTS  127 (349)
T ss_pred             hcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEec
Confidence            3  5999999875421  112344567889999999999887653 2335666554

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=97.76  E-value=0.0003  Score=65.33  Aligned_cols=122  Identities=12%  Similarity=0.088  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh--hhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME--IEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d--l~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +|||+|+|+ |.||+.++..|...|.       +|+++++.    .++++.+..+  +.-........+.......+...
T Consensus         2 ~m~I~IiGa-GaiG~~~a~~L~~~G~-------~V~lv~r~----~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~   69 (305)
T PRK05708          2 SMTWHILGA-GSLGSLWACRLARAGL-------PVRLILRD----RQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAE   69 (305)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCC-------CeEEEEec----hHHHHHHhhcCCeEEeeCCcceeeccCCCCccccc
Confidence            368999999 9999999999999886       89999997    3333322111  11000000011111111123456


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      ..|+||++.    |.            .-..+..+++..+..+++.|+.+-|=++....+. ++   ++.+++.++
T Consensus        70 ~~D~viv~v----K~------------~~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~-~~---~~~~~v~~g  125 (305)
T PRK05708         70 PIHRLLLAC----KA------------YDAEPAVASLAHRLAPGAELLLLQNGLGSQDAVA-AR---VPHARCIFA  125 (305)
T ss_pred             ccCEEEEEC----CH------------HhHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHH-Hh---CCCCcEEEE
Confidence            889999983    11            1234455667776668888888889877554443 33   344565444

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.76  E-value=0.00012  Score=67.81  Aligned_cols=95  Identities=18%  Similarity=0.210  Sum_probs=61.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||. |.+|++++..|...+.       +|.+||++    .++++..    .+.....   ..-..+..+.++++|
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~-------~V~~~dr~----~~~~~~l----~~~g~~~---~~s~~~~~~~~~~~d   61 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGH-------DCVGYDHD----QDAVKAM----KEDRTTG---VANLRELSQRLSAPR   61 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHH----HHcCCcc---cCCHHHHHhhcCCCC
Confidence            47999998 9999999999999887       89999998    4444322    2211000   000112334567899


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +|+++.  |.              ..++++++.+.....++.+||..||.
T Consensus        62 vIi~~v--p~--------------~~~~~v~~~l~~~l~~g~ivid~st~   95 (298)
T TIGR00872        62 VVWVMV--PH--------------GIVDAVLEELAPTLEKGDIVIDGGNS   95 (298)
T ss_pred             EEEEEc--Cc--------------hHHHHHHHHHHhhCCCCCEEEECCCC
Confidence            999972  21              24455555666655567788888775

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=97.76  E-value=0.0001  Score=69.45  Aligned_cols=111  Identities=10%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceE-eecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVS-VHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~-~~~~~~~al   81 (329)
                      +||.|+||+|++|++++..|+.. +.       +|+.+|+.    .....    ++... ...+ ..++. -.....+++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~----~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQ----TDRLG----DLVNHPRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCc----HHHHH----HhccCCCeEEEeCCCCCCHHHHHHHH
Confidence            36999999999999999999875 55       89999986    22211    11110 0000 01111 001123456


Q ss_pred             CCccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +++|+||++++....  ...+.......|+....++++.+++.  . ..+|.+|.
T Consensus        67 ~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~--~-~~~v~~SS  118 (347)
T PRK11908         67 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPST  118 (347)
T ss_pred             cCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc--C-CeEEEEec
Confidence            899999998875322  22334445677888888999988875  2 35555543

>PLN02583 cinnamoyl-CoA reductase

Probab=97.75  E-value=0.00027  Score=65.24  Aligned_cols=120  Identities=13%  Similarity=0.096  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      ++++|.|+||+|++|++++..|++.|.       +|++++++..  .........++.......   ..++.-..+..++
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~--~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~   75 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNG--ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA   75 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCch--hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH
Confidence            346899999999999999999999987       8998887510  111111111221000000   0112112234568


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++++|.|+..++.+........+.+..|+.....+.+.+.+..... .||++|
T Consensus        76 l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~-riV~~S  127 (297)
T PLN02583         76 LKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIE-KVVFTS  127 (297)
T ss_pred             HcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEec
Confidence            8999999876554322111235677889999999999888753122 444444

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.75  E-value=0.00013  Score=66.51  Aligned_cols=97  Identities=19%  Similarity=0.157  Sum_probs=66.2

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEE
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIA   87 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiV   87 (329)
                      |.|+||+|++|++++..|+..+.       +|+.++++.    .........  ..     ..+.. ....++++++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~--~~-----~~~~~-~~~~~~~~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSP----PAGANTKWE--GY-----KPWAP-LAESEALEGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCC----CCCCcccce--ee-----ecccc-cchhhhcCCCCEE
Confidence            57999999999999999999886       899999982    222111000  00     00111 2345688999999


Q ss_pred             EEeCCCCCCCC-C---CHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          88 ILIGSFPRKSN-M---ERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        88 i~~~g~~~~~g-~---~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      |++++.+...+ .   ....+...|+...+.+++.+.+..
T Consensus        62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~  101 (292)
T TIGR01777        62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE  101 (292)
T ss_pred             EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence            99988654322 1   233456779999999999998863

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02572 UDP-sulfoquinovose synthase

Probab=97.74  E-value=0.00011  Score=71.94  Aligned_cols=178  Identities=12%  Similarity=0.165  Sum_probs=94.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccc---hh------hhHhhh---hhc---ccCCc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKA---IK------GVIMEI---EDC---IFPLL-   68 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~---~~------~~~~dl---~~~---~~~~~-   68 (329)
                      .+||.|+||+|++|++++..|++.|.       +|+++|+......+.   ..      .....+   .+.   ...+. 
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~  119 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV  119 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence            46899999999999999999999887       899998531000000   00      000000   000   00000 


Q ss_pred             cceEeecCcccccC--CccEEEEeCCCCCCC-C-CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc------Cc
Q psy9582          69 VDVSVHENPITAFK--DANIAILIGSFPRKS-N-ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVG------NP  135 (329)
Q Consensus        69 ~~i~~~~~~~~al~--~aDiVi~~~g~~~~~-g-~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t------NP  135 (329)
                      .++.-.....++++  +.|+||++|+....+ . .+   ....+..|+.....+++.+++++ ....++.+|      +|
T Consensus       120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~  198 (442)
T PLN02572        120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTP  198 (442)
T ss_pred             CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCC
Confidence            11211112334455  479999988653211 1 11   12345679999999999998874 444455443      21


Q ss_pred             hhhHHH-HH------HHHCC--CCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         136 VNTNTY-IT------MKSAP--DLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       136 ~~~~~~-~~------~~~~~--~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      -..+.+ .+      .+.++  -..|...-+.+-+....+....++..|++..-++...|+|.+
T Consensus       199 ~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        199 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR  262 (442)
T ss_pred             CCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCC
Confidence            100000 00      00000  011223456565544555666677778877777766567764

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.71  E-value=0.00022  Score=65.84  Aligned_cols=64  Identities=9%  Similarity=0.217  Sum_probs=47.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||. |.+|+.++..|...|.       +|.+||++    .++.+.    +...      ....+.+..++++++|
T Consensus         3 ~~IgviG~-G~mG~~~a~~l~~~g~-------~v~~~d~~----~~~~~~----~~~~------g~~~~~~~~e~~~~~d   60 (296)
T PRK11559          3 MKVGFIGL-GIMGKPMSKNLLKAGY-------SLVVYDRN----PEAVAE----VIAA------GAETASTAKAVAEQCD   60 (296)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHC------CCeecCCHHHHHhcCC
Confidence            47999998 9999999999998886       89999998    433321    1111      1233455567889999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +||++.
T Consensus        61 ~vi~~v   66 (296)
T PRK11559         61 VIITML   66 (296)
T ss_pred             EEEEeC
Confidence            999983

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00043  Score=61.57  Aligned_cols=123  Identities=11%  Similarity=0.075  Sum_probs=69.4

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeec
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHE   75 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~   75 (329)
                      ||..  .+++.|+||+|.+|++++..|++.|.       +|++++++    ++.+.....+++......   ..++.-..
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   69 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGL----AAEARELAAALEAAGGRAHAIAADLADPA   69 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence            5653  48999999999999999999999887       89999887    444443333443221000   00111001


Q ss_pred             Ccc-------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          76 NPI-------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        76 ~~~-------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                      +..       +.+.+.|+||+++|.....   ..+   ....+..|......+.+.+.++.  ...+.++++|-
T Consensus        70 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         70 SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence            111       1125789999998864321   112   22334556665555555544332  12456666654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=97.70  E-value=0.00013  Score=74.92  Aligned_cols=169  Identities=11%  Similarity=0.113  Sum_probs=95.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecC-cccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHEN-PITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~-~~~a   80 (329)
                      +.+||.|+||+|++|++++..|+.. ++       +|+.+|++    .......   +.+....+ ..++.-..+ ..++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~----~~~~~~~---~~~~~~~~~~gDl~d~~~~l~~~  379 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIG----SDAISRF---LGHPRFHFVEGDISIHSEWIEYH  379 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCC----chhhhhh---cCCCceEEEeccccCcHHHHHHH
Confidence            4579999999999999999999974 66       89999987    2211100   00000000 011111111 2456


Q ss_pred             cCCccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH----HHHHHHCCC---CC
Q psy9582          81 FKDANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT----YITMKSAPD---LS  151 (329)
Q Consensus        81 l~~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~----~~~~~~~~~---~~  151 (329)
                      ++++|+||++|+...  .......+....|+....++.+.+.++. +  .+|.+|... +..    ..+.+..+-   -|
T Consensus       380 l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p  455 (660)
T PRK08125        380 IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTSE-VYGMCTDKYFDEDTSNLIVGP  455 (660)
T ss_pred             hcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcchh-hcCCCCCCCcCccccccccCC
Confidence            789999999887543  2223455677889999999999999863 3  444444321 000    001011100   01


Q ss_pred             ---CCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         152 ---YKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       152 ---~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                         +...-+.+-....++....++..+++...++...|+|..
T Consensus       456 ~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        456 INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR  497 (660)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence               111344444444455555566778777777766567753

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00027  Score=64.41  Aligned_cols=119  Identities=13%  Similarity=0.045  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA---   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a---   80 (329)
                      +.++|.|+||+|++|++++..|+..|.       +|++++++    .++++...............++.-..+..+.   
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~   71 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRS----EAARADFEALHPDRALARLLDVTDFDAIDAVVAD   71 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCC----HHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHH
Confidence            346899999999999999999999887       89999998    3333221110000000000011100111111   


Q ss_pred             ----cCCccEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEc
Q psy9582          81 ----FKDANIAILIGSFPRK---SNMER---SELLAINSSIFIEQGKALNSVA--SRDVKVLVVG  133 (329)
Q Consensus        81 ----l~~aDiVi~~~g~~~~---~g~~~---~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~t  133 (329)
                          +...|+||+++|....   ...+.   ...+..|+.....+.+.+.++.  ...+.+|++|
T Consensus        72 ~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iS  136 (277)
T PRK06180         72 AEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNIT  136 (277)
T ss_pred             HHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence                2357999999886421   11222   3346677766666655543321  1234566655

>KOG1430|consensus

Probab=97.66  E-value=0.00025  Score=66.79  Aligned_cols=123  Identities=13%  Similarity=0.228  Sum_probs=77.6

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA   80 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a   80 (329)
                      |+++.++.|+||+|++|.+++..|.+.+...     +|+++|....  ......+..++......+ ..++.-......|
T Consensus         1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~-----~irv~D~~~~--~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a   73 (361)
T KOG1430|consen    1 MEKKLSVLVTGGSGFLGQHLVQALLENELKL-----EIRVVDKTPT--QSNLPAELTGFRSGRVTVILGDLLDANSISNA   73 (361)
T ss_pred             CCcCCEEEEECCccHHHHHHHHHHHhccccc-----EEEEeccCcc--ccccchhhhcccCCceeEEecchhhhhhhhhh
Confidence            4556899999999999999999999988533     9999999832  122222222211100011 1233333456789


Q ss_pred             cCCccEEEEeCCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSFPR-KSNM-ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~~~-~~g~-~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++++ .|++++..+. .... .+......|+...+.+.+.+.+.. -+ .+|..|+
T Consensus        74 ~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~-~lIYtSs  126 (361)
T KOG1430|consen   74 FQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VK-RLIYTSS  126 (361)
T ss_pred             ccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CC-EEEEecC
Confidence            9999 7777544332 2222 355566789999999999999874 33 4444443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.66  E-value=0.00019  Score=63.96  Aligned_cols=36  Identities=22%  Similarity=0.205  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -+.+++.|+||+|.+|.+++..|++.|.       +|++++++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~   38 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRN   38 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            3457999999999999999999999987       89999998

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.65  E-value=0.00072  Score=63.24  Aligned_cols=116  Identities=13%  Similarity=0.110  Sum_probs=68.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~al   81 (329)
                      |||.|+||+|++|++++..|++.|.       +|+++|+..    .........+.+......    .++.-.....+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   69 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLC----NSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEIL   69 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCC----CchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence            4799999999999999999999886       899998651    111111111111100000    1111111122334


Q ss_pred             C--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 K--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +  ++|+||++++.....  .....+.+..|+.....+++.+++.. .. .+|.+|.
T Consensus        70 ~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss  124 (338)
T PRK10675         70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VK-NLIFSSS  124 (338)
T ss_pred             hcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEecc
Confidence            3  589999988754311  12345677889999999999888763 33 4555543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=97.65  E-value=0.00028  Score=66.72  Aligned_cols=117  Identities=10%  Similarity=0.026  Sum_probs=67.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~   82 (329)
                      .+||.|+||+|++|++++..|++.|.       +|++++++    .........++.... ..+ ..++.-.....++++
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRD----PAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK   78 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc
Confidence            47999999999999999999999887       89988876    222221111111100 000 011111122345677


Q ss_pred             CccEEEEeCCCCCCC---C-CCHH-----HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKS---N-MERS-----ELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~---g-~~~~-----~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.|+||++|+.....   . .+..     ..+..|+.....+.+.+.+.. .-..+|++|
T Consensus        79 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~S  137 (353)
T PLN02896         79 GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTS  137 (353)
T ss_pred             CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEe
Confidence            899999998764211   1 1222     233444577788888877652 122455544

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.64  E-value=0.00079  Score=62.56  Aligned_cols=95  Identities=20%  Similarity=0.176  Sum_probs=59.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|..++..|...+...     +|.++|++    .+.++. .   ...  ..  ......+..+++++||
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~-----~V~~~dr~----~~~~~~-a---~~~--g~--~~~~~~~~~~~~~~aD   68 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAG-----EIVGADRS----AETRAR-A---REL--GL--GDRVTTSAAEAVKGAD   68 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCc-----EEEEEECC----HHHHHH-H---HhC--CC--CceecCCHHHHhcCCC
Confidence            68999998 999999999999887532     79999998    433321 1   111  11  1122344567789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +||++...                ....++.+.+..+.+++++|+.++.
T Consensus        69 vViiavp~----------------~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         69 LVILCVPV----------------GASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             EEEECCCH----------------HHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            99998422                1223444455555456766655543

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.64  E-value=0.00043  Score=63.40  Aligned_cols=101  Identities=15%  Similarity=0.195  Sum_probs=64.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|++++..|...+.+..   .+|.+++++.   .++++    .+...   + ..+.++.+..+.++++|
T Consensus         2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~---~~V~~~~r~~---~~~~~----~l~~~---~-~~~~~~~~~~e~~~~aD   66 (277)
T PRK06928          2 EKIGFIGY-GSMADMIATKLLETEVATP---EEIILYSSSK---NEHFN----QLYDK---Y-PTVELADNEAEIFTKCD   66 (277)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCc---ccEEEEeCCc---HHHHH----HHHHH---c-CCeEEeCCHHHHHhhCC
Confidence            36999998 9999999999998873321   1799999871   22222    12111   1 12344556667789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +||++..  .              ..++++++.+..+..++..||.+.|-++
T Consensus        67 vVilavp--p--------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~  102 (277)
T PRK06928         67 HSFICVP--P--------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS  102 (277)
T ss_pred             EEEEecC--H--------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            9999732  1              3455666666665445666677766543

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00029  Score=62.24  Aligned_cols=123  Identities=15%  Similarity=0.134  Sum_probs=67.4

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN   76 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~   76 (329)
                      ||. +.++|.|+||+|.+|++++..|+..|.       +|++++++    .+++.....++.... ..   ..++.-..+
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~----~~~~~~~~~~l~~~~-~~~~~~~D~~~~~~   68 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARD----QKELEEAAAELNNKG-NVLGLAADVRDEAD   68 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCC----HHHHHHHHHHHhccC-cEEEEEccCCCHHH
Confidence            554 347899999999999999999998876       89999998    444433333332210 00   001100011


Q ss_pred             cc-------cccCCccEEEEeCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcCc
Q psy9582          77 PI-------TAFKDANIAILIGSFPRKS---NMERS---ELLAINSSIFIEQGKALNSVA-SRDVKVLVVGNP  135 (329)
Q Consensus        77 ~~-------~al~~aDiVi~~~g~~~~~---g~~~~---~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tNP  135 (329)
                      ..       +.+...|+||+++|.....   ..+..   +.+..|+.....+.+.+.+.. ...+.+++++..
T Consensus        69 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (237)
T PRK07326         69 VQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL  141 (237)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence            11       1234789999988754321   12222   334555554444444433221 134566666653

>PRK06194 hypothetical protein; Provisional

Probab=97.63  E-value=0.00063  Score=62.08  Aligned_cols=160  Identities=13%  Similarity=0.024  Sum_probs=83.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~al   81 (329)
                      .+++.|+||+|++|++++..|+..|.       +|+++|++    .+.++....++.......   ..++.-..+..+++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   74 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQ----QDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALA   74 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    444444433433211000   01111111122222


Q ss_pred             C-------CccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCC----CeEEEEEcCchhhHH
Q psy9582          82 K-------DANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASR----DVKVLVVGNPVNTNT  140 (329)
Q Consensus        82 ~-------~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p----~a~viv~tNP~~~~~  140 (329)
                      +       ..|+||+.+|.....   ..+   ....+..|+.....+    .+.+.+.+.+    .+.+++++--.... 
T Consensus        75 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-  153 (287)
T PRK06194         75 DAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-  153 (287)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-
Confidence            2       469999998864321   112   223355666544444    4445554321    14555554422211 


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                              +.+..-..+.+-.-...+...++..++.....++..
T Consensus       154 --------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~  189 (287)
T PRK06194        154 --------APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGAS  189 (287)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence                    111111223333223345566677777666666643

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=97.62  E-value=0.00024  Score=69.75  Aligned_cols=97  Identities=13%  Similarity=0.144  Sum_probs=65.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---C
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK---D   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~---~   83 (329)
                      +|+|||. |.+|+++|..|+..|.       +|++||++    .++.+..........    ..+..+.+..+.++   +
T Consensus         3 ~IgvIGL-G~MG~~lA~nL~~~G~-------~V~v~dr~----~~~~~~l~~~~~~~g----~~i~~~~s~~e~v~~l~~   66 (470)
T PTZ00142          3 DIGLIGL-AVMGQNLALNIASRGF-------KISVYNRT----YEKTEEFVKKAKEGN----TRVKGYHTLEELVNSLKK   66 (470)
T ss_pred             EEEEEeE-hHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHhhhhcC----CcceecCCHHHHHhcCCC
Confidence            7999998 9999999999999998       89999999    554443221111101    12344555555554   5


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +|+|+++...               .+.++++.+.+..+..++.+||..+|
T Consensus        67 ~d~Iil~v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn  102 (470)
T PTZ00142         67 PRKVILLIKA---------------GEAVDETIDNLLPLLEKGDIIIDGGN  102 (470)
T ss_pred             CCEEEEEeCC---------------hHHHHHHHHHHHhhCCCCCEEEECCC
Confidence            8988876211               14566666666666667888888887

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00025  Score=63.00  Aligned_cols=124  Identities=15%  Similarity=0.074  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~   77 (329)
                      ||-+.+++.|+||+|.+|++++..|++.|.       ++++...+.   ....+....++.......   ..++.-..+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGS---AAAADELVAEIEAAGGRAIAVQADVADAAAV   70 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCC---HHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            666778999999999999999999999987       788877651   222222222222211000   0011101111


Q ss_pred             ccc-------cCCccEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITA-------FKDANIAILIGSFPRKS------NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~a-------l~~aDiVi~~~g~~~~~------g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .++       +...|+||+.+|.....      .+.....+..|+.....+.+.+.+...+.+.++++|-
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (245)
T PRK12937         71 TRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST  140 (245)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence            222       34689999998864211      1123334566766665655555444334456666653

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.61  E-value=0.00036  Score=63.77  Aligned_cols=93  Identities=12%  Similarity=0.142  Sum_probs=63.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||- |.+|+.+|..|+..|+       ++++||++    .++...   .+....      .....+..++.++||
T Consensus         1 ~kIafIGL-G~MG~pmA~~L~~aG~-------~v~v~~r~----~~ka~~---~~~~~G------a~~a~s~~eaa~~aD   59 (286)
T COG2084           1 MKIAFIGL-GIMGSPMAANLLKAGH-------EVTVYNRT----PEKAAE---LLAAAG------ATVAASPAEAAAEAD   59 (286)
T ss_pred             CeEEEEcC-chhhHHHHHHHHHCCC-------EEEEEeCC----hhhhhH---HHHHcC------CcccCCHHHHHHhCC
Confidence            48999998 9999999999999998       99999999    444321   222211      122344578999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGK---ALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~---~i~~~~~p~a~viv~tN  134 (329)
                      +||.+-.               |-+.++++..   -+.+..+|.+++|..|+
T Consensus        60 vVitmv~---------------~~~~V~~V~~g~~g~~~~~~~G~i~IDmST   96 (286)
T COG2084          60 VVITMLP---------------DDAAVRAVLFGENGLLEGLKPGAIVIDMST   96 (286)
T ss_pred             EEEEecC---------------CHHHHHHHHhCccchhhcCCCCCEEEECCC
Confidence            9999732               2245555542   23333457778888775

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.61  E-value=0.00026  Score=65.28  Aligned_cols=63  Identities=11%  Similarity=0.196  Sum_probs=46.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||+|||. |.+|+.++..|+..|.       +|++||++    .++++.    +.+..      .....+..+++++||+
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~-------~V~~~dr~----~~~~~~----~~~~g------~~~~~~~~~~~~~aDi   58 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGY-------QLHVTTIG----PEVADE----LLAAG------AVTAETARQVTEQADV   58 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHCC------CcccCCHHHHHhcCCE
Confidence            5999998 9999999999999887       89999998    444332    22211      1122455688999999


Q ss_pred             EEEeC
Q psy9582          87 AILIG   91 (329)
Q Consensus        87 Vi~~~   91 (329)
                      ||++.
T Consensus        59 vi~~v   63 (291)
T TIGR01505        59 IFTMV   63 (291)
T ss_pred             EEEec
Confidence            99983

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.60  E-value=0.00038  Score=64.92  Aligned_cols=107  Identities=12%  Similarity=0.078  Sum_probs=69.4

Q ss_pred             hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc------cchhhhHhh-hh---hcc-------cCCccceEeecC--c
Q psy9582          17 IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ------KAIKGVIME-IE---DCI-------FPLLVDVSVHEN--P   77 (329)
Q Consensus        17 vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~------~~~~~~~~d-l~---~~~-------~~~~~~i~~~~~--~   77 (329)
                      +|+.+|..++..|+       +|+|+|.+.+..+      ++....... +.   ...       .....+++++++  .
T Consensus         1 MG~giA~~~a~~G~-------~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~   73 (314)
T PRK08269          1 MGQGIALAFAFAGH-------DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGA   73 (314)
T ss_pred             CcHHHHHHHHhCCC-------eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcch
Confidence            58899999999998       9999999931100      001111111 10   000       011246777654  5


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHH
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKS  146 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~  146 (329)
                      ++++++||+||.+              +.++..+.+.+...+.+.++|++++  +||...+....+.+.
T Consensus        74 ~~a~~~aD~ViEa--------------v~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~la~~  126 (314)
T PRK08269         74 ADALADADLVFEA--------------VPEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDLQRH  126 (314)
T ss_pred             HHHhccCCEEEEC--------------CcCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHHHhh
Confidence            6889999999998              3456678888888899999888775  888776554444443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=97.60  E-value=0.00031  Score=66.09  Aligned_cols=121  Identities=12%  Similarity=0.043  Sum_probs=67.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhh---cccCC-ccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIED---CIFPL-LVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~---~~~~~-~~~i~~~~~~~~a   80 (329)
                      ++|.|+||+|++|++++..|++.|.       +|+++|++... ..+.+.....+...   ....+ ..+++-.....++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   73 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI   73 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence            4899999999999999999999887       89999987210 00111111000000   00000 0111111223345


Q ss_pred             cCC--ccEEEEeCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhcCC-CeEEEEEc
Q psy9582          81 FKD--ANIAILIGSFPRKS-N-MERSELLAINSSIFIEQGKALNSVASR-DVKVLVVG  133 (329)
Q Consensus        81 l~~--aDiVi~~~g~~~~~-g-~~~~~~~~~n~~~~~~i~~~i~~~~~p-~a~viv~t  133 (329)
                      +++  .|+||++|+..... . ......+..|+.....+++.+.+..-. ...++.+|
T Consensus        74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~S  131 (343)
T TIGR01472        74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQAS  131 (343)
T ss_pred             HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEec
Confidence            564  59999998864321 1 122344566777888888888775312 23455544

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.60  E-value=0.00021  Score=63.18  Aligned_cols=38  Identities=24%  Similarity=0.325  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |+.+.++|.|+||+|.+|..++..|++.|.       +|.+++++
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~   38 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSN   38 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            444557999999999999999999999887       89999998

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.59  E-value=0.00051  Score=58.09  Aligned_cols=105  Identities=17%  Similarity=0.179  Sum_probs=65.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+||||+|.+|+.++....++|+       ||+-+-++    ..++... .++.    -.-.++.-.+...+++.|-|
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn----~~K~~~~-~~~~----i~q~Difd~~~~a~~l~g~D   64 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRN----ASKLAAR-QGVT----ILQKDIFDLTSLASDLAGHD   64 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeC----hHhcccc-ccce----eecccccChhhhHhhhcCCc
Confidence            6999999999999999999999998       99999998    4444321 0000    00012221233457899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +||.+-|.+. ++..     ..-.+..+.+...++...  ...+++++-
T Consensus        65 aVIsA~~~~~-~~~~-----~~~~k~~~~li~~l~~ag--v~RllVVGG  105 (211)
T COG2910          65 AVISAFGAGA-SDND-----ELHSKSIEALIEALKGAG--VPRLLVVGG  105 (211)
T ss_pred             eEEEeccCCC-CChh-----HHHHHHHHHHHHHHhhcC--CeeEEEEcC
Confidence            9999765442 1211     112233555666666643  456667653

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.59  E-value=0.00039  Score=63.25  Aligned_cols=153  Identities=12%  Similarity=0.099  Sum_probs=89.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccC--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFK--   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~--   82 (329)
                      ++|.|+|++|.|||+.+..|++.|.       +++++|.......+.+..    .+   .++. .++.-..-+.+.++  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~~g~~~~v~~----~~---~~f~~gDi~D~~~L~~vf~~~   66 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLSNGHKIALLK----LQ---FKFYEGDLLDRALLTAVFEEN   66 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCCCCCHHHhhh----cc---CceEEeccccHHHHHHHHHhc
Confidence            5899999999999999999999998       999999872111111111    00   0110 11111111222222  


Q ss_pred             CccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----CchhhHHHHHHHHCCCCCCCcE
Q psy9582          83 DANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----NPVNTNTYITMKSAPDLSYKNF  155 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----NP~~~~~~~~~~~~~~~~~~~i  155 (329)
                      .-|.||+.|+...-..  +....+...|+--...+.+.|.+.. .+.+|.-.|     +|..+  + +.+.+ -..|.+=
T Consensus        67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~--P-I~E~~-~~~p~NP  141 (329)
T COG1087          67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTS--P-ISETS-PLAPINP  141 (329)
T ss_pred             CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCc--c-cCCCC-CCCCCCc
Confidence            5788999887643221  3456778899999999999999986 665544332     44331  0 11222 1223333


Q ss_pred             EEechhHHHHHHHHHHHHhCCC
Q psy9582         156 TAMLRLDHNRAIAKLASKLNEP  177 (329)
Q Consensus       156 ~~~t~lds~r~~~~la~~l~~~  177 (329)
                      -|-|-|-+.++.+-+++..+..
T Consensus       142 YG~sKlm~E~iL~d~~~a~~~~  163 (329)
T COG1087         142 YGRSKLMSEEILRDAAKANPFK  163 (329)
T ss_pred             chhHHHHHHHHHHHHHHhCCCc
Confidence            4555555556666666665544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.59  E-value=0.00031  Score=63.04  Aligned_cols=123  Identities=16%  Similarity=0.199  Sum_probs=69.6

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc--
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP--   77 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~--   77 (329)
                      ||+ ..+++.|+||+|.+|.+++..|++.|.       +|+++|++    .+.+.....++.........++.-..+.  
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIK----PARARLAALEIGPAAIAVSLDVTRQDSIDR   69 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence            664 356899999999999999999999987       89999998    4444333222221100000011100111  


Q ss_pred             -----ccccCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcC
Q psy9582          78 -----ITAFKDANIAILIGSFPRK-S--NM---ERSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGN  134 (329)
Q Consensus        78 -----~~al~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tN  134 (329)
                           .+.+...|++|+++|.... +  ..   .....+..|+.....+.+.+.++.   ...+.|++++-
T Consensus        70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  140 (257)
T PRK07067         70 IVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS  140 (257)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence                 1223468999998875421 1  11   233445667666656655554321   13456666654

>KOG1429|consensus

Probab=97.58  E-value=0.00013  Score=65.63  Aligned_cols=112  Identities=16%  Similarity=0.150  Sum_probs=70.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+||+|+|||+++-.|+..+.       +|...|..-    .   +....+.+........+..+.-...-++++
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~egh-------~VIa~Dn~f----t---g~k~n~~~~~~~~~fel~~hdv~~pl~~ev   92 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEGH-------EVIALDNYF----T---GRKENLEHWIGHPNFELIRHDVVEPLLKEV   92 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcCC-------eEEEEeccc----c---cchhhcchhccCcceeEEEeechhHHHHHh
Confidence            47999999999999999999999886       999999872    1   222233333211122344444445678899


Q ss_pred             cEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |-|++.|.....++  .+..+.+..|.-.+.......++.   ++.++.+|
T Consensus        93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv---~aR~l~aS  140 (350)
T KOG1429|consen   93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV---GARFLLAS  140 (350)
T ss_pred             hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh---CceEEEee
Confidence            99999765433222  233334455655666666666654   35666555

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.57  E-value=0.00052  Score=60.72  Aligned_cols=116  Identities=16%  Similarity=0.172  Sum_probs=79.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCCccceEee-------cCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPLLVDVSVH-------ENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~~~~i~~~-------~~~   77 (329)
                      +-+.|+|||+++|.++|..|.+.|.       .|+|..++    .++++..+.++.+. ..+...+++-.       ...
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR----~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGA-------KVVLAARR----EERLEALADEIGAGAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecc----HHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHH
Confidence            4578999999999999999999998       89999999    88888887777641 11111112111       123


Q ss_pred             ccccCCccEEEEeCCCCCCCC------CCHHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITAFKDANIAILIGSFPRKSN------MERSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g------~~~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                      .+.+...|++|.-||...-..      .++..+++.|+..+..    +.+.|.+.  ..+-||+.+-
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r--~~G~IiN~~S  140 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER--KSGHIINLGS  140 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--CCceEEEecc
Confidence            456778999999988754211      2466778888875544    55666664  3557777653

>PRK05717 oxidoreductase; Validated

Probab=97.57  E-value=0.00021  Score=64.10  Aligned_cols=118  Identities=14%  Similarity=0.144  Sum_probs=66.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------c
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------I   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------~   78 (329)
                      +++.|+||+|++|++++..|+..|.       +|+++|++    .++......++.........++.-..+.       .
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLD----RERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            6799999999999999999999886       89999987    3322221111111000000011100111       1


Q ss_pred             cccCCccEEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582          79 TAFKDANIAILIGSFPRKS-----NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN  134 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~-----g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN  134 (329)
                      +.+...|++|+.+|.....     ..+   ....+..|+.....+.+.+.++. ...+.+|++|-
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS  144 (255)
T PRK05717         80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAS  144 (255)
T ss_pred             HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcc
Confidence            1123579999998865321     112   23456677776666666665431 12345666653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.57  E-value=0.00024  Score=57.81  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +..++.|+|| |.+|..++..|...|.-      +|++++++    .++++..+..+...    ...+....+..+.+.+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~------~i~i~nRt----~~ra~~l~~~~~~~----~~~~~~~~~~~~~~~~   75 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAK------EITIVNRT----PERAEALAEEFGGV----NIEAIPLEDLEEALQE   75 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSS------EEEEEESS----HHHHHHHHHHHTGC----SEEEEEGGGHCHHHHT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCC------EEEEEECC----HHHHHHHHHHcCcc----ccceeeHHHHHHHHhh
Confidence            3579999999 99999999999999873      79999999    66666554444211    1122223456678899


Q ss_pred             ccEEEEeCCCC
Q psy9582          84 ANIAILIGSFP   94 (329)
Q Consensus        84 aDiVi~~~g~~   94 (329)
                      +|+||.+.+.+
T Consensus        76 ~DivI~aT~~~   86 (135)
T PF01488_consen   76 ADIVINATPSG   86 (135)
T ss_dssp             ESEEEE-SSTT
T ss_pred             CCeEEEecCCC
Confidence            99999985544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.56  E-value=0.00034  Score=62.54  Aligned_cols=120  Identities=16%  Similarity=0.171  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~   77 (329)
                      ||+ .++|.|+||+|.+|.+++..|+..|.       +|++++++    .+.+.....++.......   ..++.-..+.
T Consensus         1 ~~~-~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   68 (258)
T PRK12429          1 MLK-GKVALVTGAASGIGLEIALALAKEGA-------KVVIADLN----DEAAAAAAEALQKAGGKAIGVAMDVTDEEAI   68 (258)
T ss_pred             CCC-CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence            454 47999999999999999999999887       89999998    444443333443211000   0011101111


Q ss_pred             -------ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 -------ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 -------~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                             .+.+.+.|+||++++......   .+   ....+..|+..    .+.+.+.+++.  +...|+++|.
T Consensus        69 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss  140 (258)
T PRK12429         69 NAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ--GGGRIINMAS  140 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc--CCeEEEEEcc
Confidence                   112346899999887543211   11   12233445444    56666666654  2345555543

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=97.56  E-value=0.00052  Score=63.80  Aligned_cols=124  Identities=23%  Similarity=0.184  Sum_probs=77.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|+|+ |.+|+.++..|.+.|.       .|.++-+++  ..+++...-+.+.+..... .....+....+.+..+|
T Consensus         1 mkI~IlGa-GAvG~l~g~~L~~~g~-------~V~~~~R~~--~~~~l~~~GL~i~~~~~~~-~~~~~~~~~~~~~~~~D   69 (307)
T COG1893           1 MKILILGA-GAIGSLLGARLAKAGH-------DVTLLVRSR--RLEALKKKGLRIEDEGGNF-TTPVVAATDAEALGPAD   69 (307)
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC-------eEEEEecHH--HHHHHHhCCeEEecCCCcc-ccccccccChhhcCCCC
Confidence            68999999 9999999999999983       677777761  0122221112222211100 11222333456778999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEech
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLR  160 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~  160 (329)
                      +||++.    |.            -...+..+.+..+.+++++|+..-|=.+..- .+.+..   +.+++ .|.|.
T Consensus        70 lviv~v----Ka------------~q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~~---~~~~il~G~~~  125 (307)
T COG1893          70 LVIVTV----KA------------YQLEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKIL---PKETVLGGVTT  125 (307)
T ss_pred             EEEEEe----cc------------ccHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHhC---CcceEEEEEee
Confidence            999983    21            2455667788888878889888889887766 555544   34454 44444

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.55  E-value=0.00045  Score=63.84  Aligned_cols=99  Identities=16%  Similarity=0.177  Sum_probs=65.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      |||.|+||+|++|++++..|+..|        +|+.+|+.    ...   ...|+.+.           ....++++  +
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~----~~~---~~~Dl~d~-----------~~~~~~~~~~~   54 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVH----STD---YCGDFSNP-----------EGVAETVRKIR   54 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccc----ccc---ccCCCCCH-----------HHHHHHHHhcC
Confidence            479999999999999999998776        47777776    211   11233321           11234454  5


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .|+||++++.....  ..........|+.....+++.+.+..   ..+|.+|
T Consensus        55 ~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~S  103 (299)
T PRK09987         55 PDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYS  103 (299)
T ss_pred             CCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEc
Confidence            89999998754321  12233445689999999999998863   3455544

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00046  Score=62.28  Aligned_cols=118  Identities=10%  Similarity=0.056  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------   77 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|.+.|++    .+.++....++.........++.-..+.       
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDID----ADNGAAVAASLGERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHH
Confidence            47999999999999999999999987       89999998    3333322222211000000011101111       


Q ss_pred             ccccCCccEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEc
Q psy9582          78 ITAFKDANIAILIGSFPRKS--NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVG  133 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~t  133 (329)
                      .+.+...|++|+.+|.....  ..+   ....+..|+.....+.+.+.+.. ++.+.||+++
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is  136 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT  136 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            12234679999998864321  122   22334456654444444333322 2345666665

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=97.53  E-value=0.0005  Score=64.58  Aligned_cols=91  Identities=18%  Similarity=0.192  Sum_probs=59.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.+|..|...|.       +|..||++    .+...    +.          .....++.+++++|
T Consensus       146 g~~VgIIG~-G~IG~~vA~~L~~~G~-------~V~~~d~~----~~~~~----~~----------~~~~~~l~ell~~a  199 (330)
T PRK12480        146 NMTVAIIGT-GRIGAATAKIYAGFGA-------TITAYDAY----PNKDL----DF----------LTYKDSVKEAIKDA  199 (330)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEeCC----hhHhh----hh----------hhccCCHHHHHhcC
Confidence            468999998 9999999999998776       89999998    22111    00          11234567899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|+++.....           .+...+   .+.+-...++++++|+++-=
T Consensus       200 DiVil~lP~t~-----------~t~~li---~~~~l~~mk~gavlIN~aRG  236 (330)
T PRK12480        200 DIISLHVPANK-----------ESYHLF---DKAMFDHVKKGAILVNAARG  236 (330)
T ss_pred             CEEEEeCCCcH-----------HHHHHH---hHHHHhcCCCCcEEEEcCCc
Confidence            99999732211           111121   12222334588999999853

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00027  Score=62.94  Aligned_cols=119  Identities=17%  Similarity=0.117  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~---   78 (329)
                      ++++.|+||+|++|.+++..|+..|.       +|++++++.   .+.++....++.......   ..++.-..+..   
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   75 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQK---APRANKVVAEIEAAGGRASAVGADLTDEESVAALM   75 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCc---hHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999998887       898888862   122222222232211000   01111111111   


Q ss_pred             ----cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          79 ----TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                          +.+.+.|+||+.++.......+....+..|......+++.+.++....+.++++|
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is  134 (248)
T PRK07806         76 DTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT  134 (248)
T ss_pred             HHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence                1224679999987653221222223345566666667777666543344555554

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.52  E-value=0.00028  Score=56.29  Aligned_cols=74  Identities=20%  Similarity=0.264  Sum_probs=44.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||+|+||+|.+|+.++..|.....+.     -+.+++..    ..  .|....-.........++.+.....+.+.++|+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e-----~~~~~~~~----~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   69 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFE-----LVALVSSS----RS--AGKPLSEVFPHPKGFEDLSVEDADPEELSDVDV   69 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEE-----EEEEEEST----TT--TTSBHHHTTGGGTTTEEEBEEETSGHHHTTESE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCcc-----EEEeeeec----cc--cCCeeehhccccccccceeEeecchhHhhcCCE
Confidence            79999999999999999999866552     45555555    10  111111111100112344454444678899999


Q ss_pred             EEEeC
Q psy9582          87 AILIG   91 (329)
Q Consensus        87 Vi~~~   91 (329)
                      ||.+.
T Consensus        70 vf~a~   74 (121)
T PF01118_consen   70 VFLAL   74 (121)
T ss_dssp             EEE-S
T ss_pred             EEecC
Confidence            99983

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00067  Score=60.77  Aligned_cols=121  Identities=19%  Similarity=0.082  Sum_probs=69.7

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHEN   76 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~   76 (329)
                      ||. +.+++.|+||+|.+|.+++..|++.|.       +|.+.+++    .+.++....++.+......   .++.-..+
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   69 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARR----QAELDQLVAEIRAEGGEAVALAGDVRDEAY   69 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHH
Confidence            564 346899999999999999999999887       89999998    4444444444432210000   01110011


Q ss_pred             cc-------cccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 PI-------TAFKDANIAILIGSFPR--KS--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~-------~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..       +.+...|++|..+|...  .+  ..+   ....+..|+.    ..+.+.+.+.+.  ..+.|++++.
T Consensus        70 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~~~iv~~sS  143 (254)
T PRK07478         70 AKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR--GGGSLIFTST  143 (254)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEec
Confidence            11       12336799999988632  22  122   2344566664    444555555553  3445666654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=97.51  E-value=0.0004  Score=65.20  Aligned_cols=112  Identities=9%  Similarity=-0.010  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      .++|.|+||+|++|++++..|+..|.       +|+++|++... ....++....+........   ..++.-..+..++
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   78 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW   78 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHH
Confidence            47899999999999999999999987       89999886210 0011211110000000000   0111111122334


Q ss_pred             cCC--ccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          81 FKD--ANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        81 l~~--aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      +++  .|+||++|+......  ......+..|+.....+++.+.+..
T Consensus        79 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~  125 (340)
T PLN02653         79 LDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG  125 (340)
T ss_pred             HHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc
Confidence            543  599999988643211  1233445778888899999888764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=97.50  E-value=0.0004  Score=63.93  Aligned_cols=173  Identities=13%  Similarity=0.116  Sum_probs=90.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccCC-
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFKD-   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~~-   83 (329)
                      ||.|+||+|++|++++..|++.+.-.     +|+++|+...  ..... ...++.... ..+ ..++.-..+..+++++ 
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~-----~v~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDA-----EVIVLDKLTY--AGNLE-NLADLEDNPRYRFVKGDIGDRELVSRLFTEH   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCC-----EEEEecCCCc--chhhh-hhhhhccCCCcEEEEcCCcCHHHHHHHHhhc
Confidence            58999999999999999998865211     7888886410  01111 111111100 000 0112111233455666 


Q ss_pred             -ccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch-----hhHHHHHHHHCCCCCCCcE
Q psy9582          84 -ANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV-----NTNTYITMKSAPDLSYKNF  155 (329)
Q Consensus        84 -aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~-----~~~~~~~~~~~~~~~~~~i  155 (329)
                       +|+||++++....  ........+..|+.....+++.+.+.. .+..++.+|-..     ..... ..+.. ...+...
T Consensus        73 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~-~~e~~-~~~~~~~  149 (317)
T TIGR01181        73 QPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDA-FTETT-PLAPSSP  149 (317)
T ss_pred             CCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCC-cCCCC-CCCCCCc
Confidence             8999998875321  122344567789999999999888763 454566554311     00000 11111 1122222


Q ss_pred             EEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         156 TAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       156 ~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      .+.+-....++...++...+++..-++...++|..
T Consensus       150 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPY  184 (317)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence            33333333444445566667766556655556643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.50  E-value=0.00062  Score=63.04  Aligned_cols=92  Identities=14%  Similarity=0.139  Sum_probs=59.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD--   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~--   83 (329)
                      +||++||. |.+|++++..|...+.       +|++||++    .++++.    +.+.      ......+..+.+++  
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~-------~v~v~dr~----~~~~~~----~~~~------g~~~~~s~~~~~~~~~   58 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGH-------EVVGYDVN----QEAVDV----AGKL------GITARHSLEELVSKLE   58 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHH----HHHC------CCeecCCHHHHHHhCC
Confidence            37999998 9999999999999886       89999998    444332    2221      12233444455544  


Q ss_pred             -ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 -ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 -aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       +|+||++...+               +.+++++..+....+++.++|..|+
T Consensus        59 ~advVi~~vp~~---------------~~~~~v~~~i~~~l~~g~ivid~st   95 (299)
T PRK12490         59 APRTIWVMVPAG---------------EVTESVIKDLYPLLSPGDIVVDGGN   95 (299)
T ss_pred             CCCEEEEEecCc---------------hHHHHHHHHHhccCCCCCEEEECCC
Confidence             69999873211               2344444455444446778888864

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.50  E-value=0.00037  Score=62.32  Aligned_cols=33  Identities=18%  Similarity=0.151  Sum_probs=30.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |+|.|+||+|++|..++..|+..|.       +|.+++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~   33 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRR   33 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECC
Confidence            4799999999999999999999887       89999998

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.50  E-value=0.0015  Score=62.24  Aligned_cols=76  Identities=20%  Similarity=0.297  Sum_probs=50.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||.|||| |+||+.+|..|++++- +     +|++.|++    .+++...............-++.-...+.+.+++.|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d-~-----~V~iAdRs----~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGD-G-----EVTIADRS----KEKCARIAELIGGKVEALQVDAADVDALVALIKDFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCC-c-----eEEEEeCC----HHHHHHHHhhccccceeEEecccChHHHHHHHhcCC
Confidence            57999999 9999999999999875 2     89999999    444443322110000000012222235678899999


Q ss_pred             EEEEeCC
Q psy9582          86 IAILIGS   92 (329)
Q Consensus        86 iVi~~~g   92 (329)
                      +||.++.
T Consensus        71 ~VIn~~p   77 (389)
T COG1748          71 LVINAAP   77 (389)
T ss_pred             EEEEeCC
Confidence            9999854

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=97.49  E-value=0.00079  Score=61.08  Aligned_cols=91  Identities=15%  Similarity=0.262  Sum_probs=59.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|++++..|...+.+..+   +++.+|++    .+++                .+....+..+.++++|
T Consensus         4 mkI~iIG~-G~mG~ai~~~l~~~~~~~~~---~i~~~~~~----~~~~----------------~~~~~~~~~~~~~~~D   59 (260)
T PTZ00431          4 IRVGFIGL-GKMGSALAYGIENSNIIGKE---NIYYHTPS----KKNT----------------PFVYLQSNEELAKTCD   59 (260)
T ss_pred             CEEEEECc-cHHHHHHHHHHHhCCCCCcc---eEEEECCC----hhcC----------------CeEEeCChHHHHHhCC
Confidence            78999998 99999999999988754322   68888887    3221                0122345566788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +||++  ++.              ..++++.+.+..+.++ ..+|...+-+.
T Consensus        60 ~Vila--vkp--------------~~~~~vl~~i~~~l~~-~~iIS~~aGi~   94 (260)
T PTZ00431         60 IIVLA--VKP--------------DLAGKVLLEIKPYLGS-KLLISICGGLN   94 (260)
T ss_pred             EEEEE--eCH--------------HHHHHHHHHHHhhccC-CEEEEEeCCcc
Confidence            99997  221              3556666666655323 34455554443

>PRK06545 prephenate dehydrogenase; Validated

Probab=97.48  E-value=0.0013  Score=62.58  Aligned_cols=94  Identities=18%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||+|||. |.||.+++..|...|.       ++.++|.+    .+... .....   ......  ..+++..+++++||
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~-------~v~i~~~~----~~~~~-~~~a~---~~~~~~--~~~~~~~~~~~~aD   62 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGP-------DVFIIGYD----PSAAQ-LARAL---GFGVID--ELAADLQRAAAEAD   62 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCC-------CeEEEEeC----CCHHH-HHHHh---cCCCCc--ccccCHHHHhcCCC
Confidence            47999998 9999999999999887       78899988    32221 11111   101111  13345667889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS-VASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~-~~~p~a~viv~t  133 (329)
                      +||++.  |.              ..+.++.+.+.. ..+|+++|..++
T Consensus        63 lVilav--P~--------------~~~~~vl~~l~~~~l~~~~ivtDv~   95 (359)
T PRK06545         63 LIVLAV--PV--------------DATAALLAELADLELKPGVIVTDVG   95 (359)
T ss_pred             EEEEeC--CH--------------HHHHHHHHHHhhcCCCCCcEEEeCc
Confidence            999983  21              234455556654 234676665444

>PRK09135 pteridine reductase; Provisional

Probab=97.47  E-value=0.00069  Score=60.12  Aligned_cols=112  Identities=14%  Similarity=0.043  Sum_probs=64.1

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeec
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHE   75 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~   75 (329)
                      ||. +.++|.|+||+|++|++++..|++.|.       +|.+++++.   .+.++....++.+......    .+++-..
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   70 (249)
T PRK09135          1 MMTDSAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRS---AAEADALAAELNALRPGSAAALQADLLDPD   70 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC---HHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            443 457899999999999999999999887       899999862   2223333333332110000    0111111


Q ss_pred             Ccccc-------cCCccEEEEeCCCCCC--CC----CCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          76 NPITA-------FKDANIAILIGSFPRK--SN----MERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        76 ~~~~a-------l~~aDiVi~~~g~~~~--~g----~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      +..++       +...|+||+++|....  ..    .+....+..|+.....+.+.+.++
T Consensus        71 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  130 (249)
T PRK09135         71 ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ  130 (249)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence            11122       2357999999875321  11    123445667777666666665543

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.00062  Score=60.89  Aligned_cols=35  Identities=17%  Similarity=0.175  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|.+|..++..|++.|.       +|++++++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~   40 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRD   40 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            357999999999999999999999886       89999998

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.0014  Score=58.27  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~   39 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADIN   39 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            457899999999999999999999886       89999998

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=97.46  E-value=0.00056  Score=63.29  Aligned_cols=62  Identities=21%  Similarity=0.320  Sum_probs=47.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||+|||. |.+|.+++..|+..|.       +|++||++    .++++.    +....      ...+.+..++++++|+
T Consensus         3 ~Ig~IGl-G~mG~~mA~~l~~~G~-------~V~v~d~~----~~~~~~----~~~~g------~~~~~s~~~~~~~aDv   60 (296)
T PRK15461          3 AIAFIGL-GQMGSPMASNLLKQGH-------QLQVFDVN----PQAVDA----LVDKG------ATPAASPAQAAAGAEF   60 (296)
T ss_pred             eEEEEee-CHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHcC------CcccCCHHHHHhcCCE
Confidence            7999998 9999999999999887       89999998    444432    22211      2233455678899999


Q ss_pred             EEEe
Q psy9582          87 AILI   90 (329)
Q Consensus        87 Vi~~   90 (329)
                      ||++
T Consensus        61 Vi~~   64 (296)
T PRK15461         61 VITM   64 (296)
T ss_pred             EEEe
Confidence            9997

>KOG2666|consensus

Probab=97.45  E-value=0.00021  Score=64.97  Aligned_cols=80  Identities=21%  Similarity=0.179  Sum_probs=54.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--------C-ccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--------L-LVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--------~-~~~i~~~~   75 (329)
                      +||+.||| |.+|......++ ++.-      ++|+++|++    ..+..++-.|---...|        + ..++.+++
T Consensus         2 ~kicciga-gyvggptcavia~kcp~------i~vtvvd~s----~~ri~~wnsd~lpiyepgldevv~~crgknlffst   70 (481)
T KOG2666|consen    2 VKICCIGA-GYVGGPTCAVIALKCPD------IEVTVVDIS----VPRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFST   70 (481)
T ss_pred             ceEEEecC-cccCCcchheeeecCCc------eEEEEEecC----chHhhcccCCCCcccCCCHHHHHHHhcCCceeeec
Confidence            58999999 999987544443 3433      399999999    44454432221111001        1 15788889


Q ss_pred             CcccccCCccEEEEeCCCCCC
Q psy9582          76 NPITAFKDANIAILIGSFPRK   96 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~   96 (329)
                      |.+.+++.||+|++....|.|
T Consensus        71 diekai~eadlvfisvntptk   91 (481)
T KOG2666|consen   71 DIEKAIKEADLVFISVNTPTK   91 (481)
T ss_pred             chHHHhhhcceEEEEecCCcc
Confidence            999999999999998887765

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.45  E-value=0.0006  Score=60.45  Aligned_cols=38  Identities=26%  Similarity=0.335  Sum_probs=33.5

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||.+  .+++.|+||+|.+|.+++..|+..|.       +|++++++
T Consensus         1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~   40 (239)
T PRK07666          1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGV-------NVGLLART   40 (239)
T ss_pred             CCccCCCCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            6643  46899999999999999999999887       89999998

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00064  Score=61.96  Aligned_cols=116  Identities=9%  Similarity=0.037  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA   80 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a   80 (329)
                      |.+.++|.|+||+|++|.+++..|++.|.       +|++.+++    .+.+...    ....... ..+++-..+..++
T Consensus         1 m~~~k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~----~~~~~~l----~~~~~~~~~~Dl~d~~~~~~~   65 (277)
T PRK05993          1 MDMKRSILITGCSSGIGAYCARALQSDGW-------RVFATCRK----EEDVAAL----EAEGLEAFQLDYAEPESIAAL   65 (277)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHH----HHCCceEEEccCCCHHHHHHH
Confidence            33346899999999999999999999887       89999998    3333321    1110000 0011100111111


Q ss_pred             c--------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 F--------KDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l--------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +        ...|++|..+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|-
T Consensus        66 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~--~~g~iv~isS  135 (277)
T PRK05993         66 VAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ--GQGRIVQCSS  135 (277)
T ss_pred             HHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc--CCCEEEEECC
Confidence            1        2469999988764321   112   23445666655    56666666664  2345666653

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.00056  Score=60.26  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|..++..|++.|.       +|++++++
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~   40 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRG   40 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCC
Confidence            57999999999999999999999987       89999998

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.42  E-value=0.00064  Score=62.52  Aligned_cols=73  Identities=14%  Similarity=0.170  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..||+|+|| |.+|++++..|...|.-      +|+++|++    .++++..+.++.+.. +. ..+....+..+.++++
T Consensus       127 ~k~vlIlGa-GGaaraia~aL~~~G~~------~I~I~nR~----~~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~a  193 (284)
T PRK12549        127 LERVVQLGA-GGAGAAVAHALLTLGVE------RLTIFDVD----PARAAALADELNARF-PA-ARATAGSDLAAALAAA  193 (284)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCC------EEEEECCC----HHHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCC
Confidence            368999999 99999999999988863      79999999    677777766665432 11 1222223345678899


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+||.+
T Consensus       194 DiVIna  199 (284)
T PRK12549        194 DGLVHA  199 (284)
T ss_pred             CEEEEC
Confidence            999997

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.42  E-value=0.00068  Score=62.83  Aligned_cols=92  Identities=15%  Similarity=0.163  Sum_probs=57.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK---   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~---   82 (329)
                      +||+|||. |.+|++++..|+..+.       +|.+||++    +++.+.    +.+..      .....+..+.++   
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~-------~v~v~dr~----~~~~~~----~~~~g------~~~~~~~~e~~~~~~   58 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGH-------EVVGYDRN----PEAVEA----LAEEG------ATGADSLEELVAKLP   58 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCC-------eEEEEECC----HHHHHH----HHHCC------CeecCCHHHHHhhcC
Confidence            47999998 9999999999999887       89999998    444432    22211      222333344444   


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++|+||++....               +.++++.+.+....+++.++|..|+
T Consensus        59 ~~dvvi~~v~~~---------------~~~~~v~~~l~~~l~~g~ivid~st   95 (301)
T PRK09599         59 APRVVWLMVPAG---------------EITDATIDELAPLLSPGDIVIDGGN   95 (301)
T ss_pred             CCCEEEEEecCC---------------cHHHHHHHHHHhhCCCCCEEEeCCC
Confidence            469998873211               1333333444444446677777754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.42  E-value=0.001  Score=64.23  Aligned_cols=101  Identities=14%  Similarity=0.154  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~a   80 (329)
                      +++++.|+||+|++|.+++..|++.|.       +|.+++++    .+++...   ..+..... .....++  .+..+.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~----~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~  242 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSN----SDKITLE---INGEDLPVKTLHWQVGQEAALAEL  242 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH
Confidence            346899999999999999999999887       89999987    3333211   11100000 0011111  122345


Q ss_pred             cCCccEEEEeCCCCCCCCCC---HHHHHHHHHHHHHHHHHH
Q psy9582          81 FKDANIAILIGSFPRKSNME---RSELLAINSSIFIEQGKA  118 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~---~~~~~~~n~~~~~~i~~~  118 (329)
                      +.+.|++|+.+|.......+   ....+..|......+++.
T Consensus       243 l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a  283 (406)
T PRK07424        243 LEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMEL  283 (406)
T ss_pred             hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999988764322222   234456666644444433

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.41  E-value=0.00078  Score=59.70  Aligned_cols=125  Identities=14%  Similarity=0.217  Sum_probs=67.8

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc--
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP--   77 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~--   77 (329)
                      ||. +.+++.|+||+|.+|..++..|++.|.       .|.+.+++    .++++....++.........++.-..+.  
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTR----VEKLEALAAELGERVKIFPANLSDRDEVKA   69 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence            553 357999999999999999999999886       78888887    4444332222211000000011000111  


Q ss_pred             -----ccccCCccEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCch
Q psy9582          78 -----ITAFKDANIAILIGSFPRKS---N---MERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNPV  136 (329)
Q Consensus        78 -----~~al~~aDiVi~~~g~~~~~---g---~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP~  136 (329)
                           .+.+...|+||+++|.....   .   .+....+..|+.....+++.+.+..  .+.+.+++++...
T Consensus        70 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~  141 (245)
T PRK12936         70 LGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVV  141 (245)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHH
Confidence                 11245689999998864311   1   1233445566665554544433221  1345666666543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.41  E-value=0.00061  Score=65.14  Aligned_cols=79  Identities=18%  Similarity=0.198  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..+||+||||.|.+|.+++..|...|+       +|+++|++    ..                       .+..+++++
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~----~~-----------------------~~~~~~~~~  142 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQD----DW-----------------------DRAEDILAD  142 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCC----cc-----------------------hhHHHHHhc
Confidence            347999999559999999999999887       89999986    10                       012356789


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ||+||++.  |.              ..+.++.+.+.. .+|+++|+-+|
T Consensus       143 aDlVilav--P~--------------~~~~~~~~~l~~-l~~~~iv~Dv~  175 (374)
T PRK11199        143 AGMVIVSV--PI--------------HLTEEVIARLPP-LPEDCILVDLT  175 (374)
T ss_pred             CCEEEEeC--cH--------------HHHHHHHHHHhC-CCCCcEEEECC
Confidence            99999983  21              122333444555 35777765554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=97.39  E-value=0.00078  Score=63.47  Aligned_cols=174  Identities=10%  Similarity=0.093  Sum_probs=92.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC-
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK-   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~-   82 (329)
                      |||.|+||+|++|++++..|+..|..      .+..+|....  ..... ....+.... ..+ ..++.-..+..++++ 
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~------~v~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQD------SVVNVDKLTY--AGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQ   71 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCC------eEEEecCCCc--cchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHh
Confidence            48999999999999999999988751      4666775410  01111 011111000 000 011111122234454 


Q ss_pred             -CccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcC------CC-eEEEEEcCchhhHHH-----------
Q psy9582          83 -DANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVAS------RD-VKVLVVGNPVNTNTY-----------  141 (329)
Q Consensus        83 -~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~------p~-a~viv~tNP~~~~~~-----------  141 (329)
                       +.|+||++|+....  +.......+..|+.....+++.+.++..      .. ..+|.+|-.. +...           
T Consensus        72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~  150 (352)
T PRK10084         72 HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSE  150 (352)
T ss_pred             cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccc
Confidence             47999999876431  1223456788999999999998887510      11 2444444221 0000           


Q ss_pred             ---HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         142 ---ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       142 ---~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                         .+.+.. .+.|....+.+-....++...+++..+++...++...|.|.+
T Consensus       151 ~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        151 ELPLFTETT-AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY  201 (352)
T ss_pred             cCCCccccC-CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence               011111 122333445555555556566677778776666655567764

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=97.39  E-value=0.0009  Score=60.56  Aligned_cols=94  Identities=17%  Similarity=0.247  Sum_probs=64.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||+ |+||.+++..|...+.....   +|.+.|++    .+++.    ++.+.. +.  .  .+++..++...+|
T Consensus         2 ~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~---~I~v~~~~----~e~~~----~l~~~~-g~--~--~~~~~~~~~~~ad   64 (266)
T COG0345           2 MKIGFIGA-GNMGEAILSGLLKSGALPPE---EIIVTNRS----EEKRA----ALAAEY-GV--V--TTTDNQEAVEEAD   64 (266)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHhcCCCCcc---eEEEeCCC----HHHHH----HHHHHc-CC--c--ccCcHHHHHhhCC
Confidence            57999999 99999999999998843322   89999988    44333    232211 11  1  2566678899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++.    ||            ..+.++++.++.. .++.+||-+.
T Consensus        65 vv~Lav----KP------------q~~~~vl~~l~~~-~~~~lvISia   95 (266)
T COG0345          65 VVFLAV----KP------------QDLEEVLSKLKPL-TKDKLVISIA   95 (266)
T ss_pred             EEEEEe----Ch------------HhHHHHHHHhhcc-cCCCEEEEEe
Confidence            999973    33            3666777777763 3566665554

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.39  E-value=0.0014  Score=61.64  Aligned_cols=114  Identities=14%  Similarity=0.147  Sum_probs=73.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc----------CCccceEee
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF----------PLLVDVSVH   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~----------~~~~~i~~~   74 (329)
                      ..+|+|||- |+||..+|..++..|.       .|.=+|+|    +.+.+..-.--.+...          -...+++.|
T Consensus         9 ~~~I~ViGL-GYVGLPlA~~fA~~G~-------~ViG~DIn----~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraT   76 (436)
T COG0677           9 SATIGVIGL-GYVGLPLAAAFASAGF-------KVIGVDIN----QKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRAT   76 (436)
T ss_pred             ceEEEEEcc-ccccHHHHHHHHHcCC-------ceEeEeCC----HHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEe
Confidence            379999998 9999999999999998       89999999    4444321100000000          012568888


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchh
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVN  137 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~  137 (329)
                      ++ .+.++.||++|++.-+|-+...+      -++..+.+-++.|.++.++...||+= |-|..
T Consensus        77 td-~~~l~~~dv~iI~VPTPl~~~~~------pDls~v~~aa~sIa~~L~kG~LVIlEST~~PG  133 (436)
T COG0677          77 TD-PEELKECDVFIICVPTPLKKYRE------PDLSYVESAARSIAPVLKKGDLVILESTTPPG  133 (436)
T ss_pred             cC-hhhcccCCEEEEEecCCcCCCCC------CChHHHHHHHHHHHHhcCCCCEEEEecCCCCC
Confidence            87 57788999999997776543211      12235555566666666554455444 45543

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.00067  Score=63.75  Aligned_cols=120  Identities=13%  Similarity=0.051  Sum_probs=68.8

Q ss_pred             CCC--CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--c
Q psy9582           1 MLK--KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--E   75 (329)
Q Consensus         1 ~~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~   75 (329)
                      ||+  +.+++.|+||+|.+|.+++..|+..|.       +|++++++    +++++....++....... .....++  .
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~   69 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARD----EEALQAVAEECRALGAEVLVVPTDVTDAD   69 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHH
Confidence            554  347899999999999999999999987       89999998    555554444443321110 0011111  1


Q ss_pred             Cccc-------ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPIT-------AFKDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~~-------al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +..+       .+...|++|..+|.....   ..+   ....+..|.-..    +...+.+.+.  ..+.+|+++
T Consensus        70 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~--~~g~iV~is  142 (330)
T PRK06139         70 QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ--GHGIFINMI  142 (330)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc--CCCEEEEEc
Confidence            1111       125679999998864321   112   223455555433    3344555543  245666654

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0011  Score=59.83  Aligned_cols=121  Identities=12%  Similarity=0.109  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~a-   80 (329)
                      .+++.|+||+|.+|..++..|+..|.       +|+++|++    .+.+.....++....... ...+.++  .+..+. 
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   77 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRS----QEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF   77 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence            47999999999999999999999887       89999988    333333323332211000 0011111  111111 


Q ss_pred             ------cCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcCch
Q psy9582          81 ------FKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVA-SRDVKVLVVGNPV  136 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tNP~  136 (329)
                            +...|++|..+|.....   ..+.   ...+..|+.....+.+.+.+.. ++++.|++++.+.
T Consensus        78 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~  146 (264)
T PRK07576         78 AQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ  146 (264)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence                  34569999988643211   1222   2334566665555555444321 1345677776643

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.00089  Score=61.71  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI   57 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~   57 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|++++++    .+.++...
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~----~~~l~~~~   81 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARR----EDLLDAVA   81 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHH
Confidence            347899999999999999999999887       89999998    44444433

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=97.38  E-value=0.00045  Score=56.96  Aligned_cols=106  Identities=15%  Similarity=0.138  Sum_probs=66.5

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH---hhhhhcccCCccceEeecCc-ccccCC
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI---MEIEDCIFPLLVDVSVHENP-ITAFKD   83 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~---~dl~~~~~~~~~~i~~~~~~-~~al~~   83 (329)
                      |+|+|+ |.+|..+|..|.+.+.       +|.++++.    . +++...   ..+................. .+..+.
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~-------~V~l~~r~----~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGH-------DVTLVSRS----P-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGP   67 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTC-------EEEEEESH----H-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHST
T ss_pred             CEEECc-CHHHHHHHHHHHHCCC-------ceEEEEcc----c-cHHhhhheeEEEEecccceecccccccCcchhccCC
Confidence            789999 9999999999999887       99999998    3 333211   11111000000011111121 246789


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYI  142 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~  142 (329)
                      +|+||++.-.                ....+..+.++++..++..|+.+-|=.+..-.+
T Consensus        68 ~D~viv~vKa----------------~~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l  110 (151)
T PF02558_consen   68 YDLVIVAVKA----------------YQLEQALQSLKPYLDPNTTIVSLQNGMGNEEVL  110 (151)
T ss_dssp             ESEEEE-SSG----------------GGHHHHHHHHCTGEETTEEEEEESSSSSHHHHH
T ss_pred             CcEEEEEecc----------------cchHHHHHHHhhccCCCcEEEEEeCCCCcHHHH
Confidence            9999998311                234556677888887888889998977665333

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00079  Score=60.87  Aligned_cols=37  Identities=19%  Similarity=0.142  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      || +..+|.|+||+|.+|++++..|++.|.       +|++.+++
T Consensus         1 m~-~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~   37 (270)
T PRK06179          1 MS-NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRN   37 (270)
T ss_pred             CC-CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            44 446899999999999999999999887       89999998

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00097  Score=59.93  Aligned_cols=118  Identities=14%  Similarity=0.091  Sum_probs=65.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccc---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITA---   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~a---   80 (329)
                      +++.|+||+|.+|..++..|++.|.       +|.++|++    .+.++....++......+ ..+.++  .+..++   
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~   69 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-------RVGAYDIN----EAGLAALAAELGAGNAWT-GALDVTDRAAWDAALAD   69 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHhcCCceEE-EEecCCCHHHHHHHHHH
Confidence            4699999999999999999999887       89999988    443332222221100000 011111  111122   


Q ss_pred             -----cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          81 -----FKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        81 -----l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                           ....|+||+++|......   .+   ....+..|+.....+.+.+.++.  .+.+.+++++-.
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  137 (260)
T PRK08267         70 FAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSA  137 (260)
T ss_pred             HHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence                 235599999988653211   11   33455667775555544443221  134556665543

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00054  Score=62.26  Aligned_cols=36  Identities=17%  Similarity=0.026  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||.  ++|.|+||+|.+|++++..|++.|.       +|.+.+++
T Consensus         1 ~~~--k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~   36 (275)
T PRK08263          1 MME--KVWFITGASRGFGRAWTEAALERGD-------RVVATARD   36 (275)
T ss_pred             CCC--CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence            444  4799999999999999999999886       89999988

>PLN02686 cinnamoyl-CoA reductase

Probab=97.36  E-value=0.00071  Score=64.49  Aligned_cols=106  Identities=12%  Similarity=0.125  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--------ccCC-ccceEeec
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--------IFPL-LVDVSVHE   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--------~~~~-~~~i~~~~   75 (329)
                      .++|.|+||+|++|++++..|++.|.       +|+++..+    .+.+... .++...        ...+ ..++.-..
T Consensus        53 ~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~----~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~  120 (367)
T PLN02686         53 ARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDT----QEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPE  120 (367)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHH-HHHhhhccccccCCceEEEEcCCCCHH
Confidence            46899999999999999999999987       88877665    2222211 111100        0000 01221112


Q ss_pred             CcccccCCccEEEEeCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNM--ERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~--~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      +..++++++|.||++++.....+.  ........|+...+++.+.+.+.
T Consensus       121 ~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~  169 (367)
T PLN02686        121 SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT  169 (367)
T ss_pred             HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence            345568899999998765322221  12334566888889999988775

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.36  E-value=0.00093  Score=64.27  Aligned_cols=116  Identities=12%  Similarity=0.107  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh--Hhhhhhc--ccCC-ccceEeecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV--IMEIEDC--IFPL-LVDVSVHEN   76 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~--~~dl~~~--~~~~-~~~i~~~~~   76 (329)
                      |.+.+||.|+||+|++|++++..|+..|.       +|++++++    .......  ..++...  .... ..++.-..+
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~----~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  125 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVARE----KSGIRGKNGKEDTKKELPGAEVVFGDVTDADS  125 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEec----hhhccccchhhHHhhhcCCceEEEeeCCCHHH
Confidence            34567999999999999999999999887       89999987    2222110  0011000  0000 011111122


Q ss_pred             cccccC----CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 PITAFK----DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~~~al~----~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..++++    ++|+||++++.+....   .+....|......+.+.+++.. -. .+|.+|
T Consensus       126 l~~~~~~~~~~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~g-v~-r~V~iS  181 (390)
T PLN02657        126 LRKVLFSEGDPVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREVG-AK-HFVLLS  181 (390)
T ss_pred             HHHHHHHhCCCCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence            344455    5899999766432111   1224567777788888887763 33 344444

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=97.36  E-value=0.0015  Score=61.55  Aligned_cols=175  Identities=10%  Similarity=0.075  Sum_probs=92.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceEeecCcccccC-
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVSVHENPITAFK-   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~~~~~~~~al~-   82 (329)
                      +||.|+||+|++|++++..|+..|.-      .++++|..+.  ....... ..+... ...+ ..++.-..+..++++ 
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~------~v~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSD------AVVVVDKLTY--AGNLMSL-APVAQSERFAFEKVDICDRAELARVFTE   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCC------EEEEEecCcc--ccchhhh-hhcccCCceEEEECCCcChHHHHHHHhh
Confidence            47999999999999999999988751      4667776510  0111100 011000 0000 011111122334455 


Q ss_pred             -CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhc------CCC-eEEEEEcCchhhH-----HHHHHHHC
Q psy9582          83 -DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVA------SRD-VKVLVVGNPVNTN-----TYITMKSA  147 (329)
Q Consensus        83 -~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~------~p~-a~viv~tNP~~~~-----~~~~~~~~  147 (329)
                       +.|+||++++.....  ..........|+.....+++.+.+++      ++. ..++.+|-..-.-     ...+.+..
T Consensus        73 ~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~  152 (355)
T PRK10217         73 HQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETT  152 (355)
T ss_pred             cCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCC
Confidence             389999998864321  12345567789999999998887641      011 2455554321000     00011111


Q ss_pred             CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         148 PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       148 ~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                       ...+....+.+-....++....++..+++..-++...|+|.+
T Consensus       153 -~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        153 -PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPY  194 (355)
T ss_pred             -CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCC
Confidence             112222334455545556666677778776666666567754

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.00098  Score=59.28  Aligned_cols=105  Identities=10%  Similarity=0.085  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec---------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE---------   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~---------   75 (329)
                      .+++.|+||+|.+|++++..|++.|.       +|++++++    .+.+.....++.... .. .....+.         
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~   72 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGA-------RVAITGRD----PASLEAARAELGESA-LV-IRADAGDVAAQKALAQ   72 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCC----HHHHHHHHHHhCCce-EE-EEecCCCHHHHHHHHH
Confidence            36999999999999999999999987       89999988    333332221111000 00 0000000         


Q ss_pred             CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh
Q psy9582          76 NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      ...+.+...|+||+.+|.....   ..+   ....+..|+.....+.+.+.++
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (249)
T PRK06500         73 ALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL  125 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            0112235679999998864321   112   2345667777777777776653

>PLN02256 arogenate dehydrogenase

Probab=97.35  E-value=0.0037  Score=58.04  Aligned_cols=92  Identities=16%  Similarity=0.163  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc-C
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF-K   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al-~   82 (329)
                      +.+||+|||+ |.+|+.++..|.+.|.       +|+.+|.+    ..  ...+.++     .    +...++..+.+ .
T Consensus        35 ~~~kI~IIG~-G~mG~slA~~L~~~G~-------~V~~~d~~----~~--~~~a~~~-----g----v~~~~~~~e~~~~   91 (304)
T PLN02256         35 RKLKIGIVGF-GNFGQFLAKTFVKQGH-------TVLATSRS----DY--SDIAAEL-----G----VSFFRDPDDFCEE   91 (304)
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC-------EEEEEECc----cH--HHHHHHc-----C----CeeeCCHHHHhhC
Confidence            4579999998 9999999999998775       89999988    21  1111111     1    12234444454 4


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hhhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKAL-NSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i-~~~~~p~a~viv~tN  134 (329)
                      ++|+||++...                ..+.++.+.+ ..+.+++++|+-++.
T Consensus        92 ~aDvVilavp~----------------~~~~~vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256         92 HPDVVLLCTSI----------------LSTEAVLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             CCCEEEEecCH----------------HHHHHHHHhhhhhccCCCCEEEecCC
Confidence            79999997321                2344444544 333347777766665

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.33  E-value=0.00077  Score=62.86  Aligned_cols=38  Identities=18%  Similarity=0.180  Sum_probs=33.1

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||. +.+++.|+||+|++|.+++..|+..|.       +|++.+++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~   39 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRN   39 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence            443 456899999999999999999999886       89999988

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=97.33  E-value=0.0012  Score=61.67  Aligned_cols=64  Identities=13%  Similarity=0.063  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||. |++|.++|..|...|+       +|+.++.+    ..+....+.   ..  .    +.. .+..+++++|
T Consensus        17 gktIgIIG~-GsmG~AlA~~L~~sG~-------~Vvv~~r~----~~~s~~~A~---~~--G----~~~-~s~~eaa~~A   74 (330)
T PRK05479         17 GKKVAIIGY-GSQGHAHALNLRDSGV-------DVVVGLRE----GSKSWKKAE---AD--G----FEV-LTVAEAAKWA   74 (330)
T ss_pred             CCEEEEEee-HHHHHHHHHHHHHCCC-------EEEEEECC----chhhHHHHH---HC--C----Cee-CCHHHHHhcC
Confidence            479999998 9999999999999887       78888776    222211111   11  1    122 2567889999


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+|+++
T Consensus        75 DVVvLa   80 (330)
T PRK05479         75 DVIMIL   80 (330)
T ss_pred             CEEEEc
Confidence            999997

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.33  E-value=0.00064  Score=61.29  Aligned_cols=35  Identities=26%  Similarity=0.279  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|.+|.+++..|+..|.       +|.++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~   39 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERS   39 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            457999999999999999999999987       89999998

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.33  E-value=0.00084  Score=60.13  Aligned_cols=118  Identities=11%  Similarity=0.103  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
                      .++|.|+||+|.+|+.++..|+..|.       +|++++++    .+.+.....++........   .++.-..+..++ 
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRN----AATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            57899999999999999999999887       89999998    4444433334432110000   011111111112 


Q ss_pred             ------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCc
Q psy9582          81 ------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP  135 (329)
                            +...|.+|..+|.... +  ..+   ....+..|+.....++    +.+.+.  ..+.+++++..
T Consensus        80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~~ss~  148 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ--GYGRIIAITSI  148 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEeec
Confidence                  2345899998876421 1  112   2234566666555555    444333  34566676654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.33  E-value=0.0028  Score=56.87  Aligned_cols=119  Identities=11%  Similarity=0.128  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~----   77 (329)
                      .+++.|+||+|.+|++++..|+..|.       +|++++++    .++++....++.......   ..+++-..+.    
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~   80 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARK----AEELEEAAAHLEALGIDALWIAADVADEADIERLA   80 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            47899999999999999999999887       89999998    333433322332111000   0011100111    


Q ss_pred             ---ccccCCccEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhh---cCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPRKS---N---MERSELLAINSSIFIEQGKALNSV---ASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~~---g---~~~~~~~~~n~~~~~~i~~~i~~~---~~p~a~viv~tN  134 (329)
                         .+.+...|.||+++|.....   .   ......+..|+.....+.+.+.++   .++.+.++++|.
T Consensus        81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS  149 (259)
T PRK08213         81 EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS  149 (259)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence               11124679999998753211   1   122344567777777776655443   113456666654

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=97.32  E-value=0.0033  Score=58.03  Aligned_cols=107  Identities=18%  Similarity=0.207  Sum_probs=67.5

Q ss_pred             CEEEEEcCCCc--------------------hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhcc
Q psy9582           6 VRISITGAAGQ--------------------IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCI   64 (329)
Q Consensus         6 ~kI~IiGa~G~--------------------vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~   64 (329)
                      |||+|-|| |+                    -|+++|..|+..|+       +|++||++    .+++. .....+.+. 
T Consensus         1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh-------eV~V~Drn----rsa~e~e~~e~Laea-   67 (341)
T TIGR01724         1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH-------DVVLAEPN----REFMSDDLWKKVEDA-   67 (341)
T ss_pred             CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC-------EEEEEeCC----hhhhhhhhhHHHHHC-
Confidence            57888888 75                    37899999999998       99999998    33332 112233332 


Q ss_pred             cCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHH
Q psy9582          65 FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYIT  143 (329)
Q Consensus        65 ~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~  143 (329)
                           ......+..++.+++|+||++-..               .+.+++++..+.....+++++|..| -+.+.+-+++
T Consensus        68 -----GA~~AaS~aEAAa~ADVVIL~LPd---------------~aaV~eVl~GLaa~L~~GaIVID~STIsP~t~~~~~  127 (341)
T TIGR01724        68 -----GVKVVSDDKEAAKHGEIHVLFTPF---------------GKGTFSIARTIIEHVPENAVICNTCTVSPVVLYYSL  127 (341)
T ss_pred             -----CCeecCCHHHHHhCCCEEEEecCC---------------HHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHH
Confidence                 133445667899999999997321               2344444444554444666776664 4555555555


Q ss_pred             HH
Q psy9582         144 MK  145 (329)
Q Consensus       144 ~~  145 (329)
                      ..
T Consensus       128 e~  129 (341)
T TIGR01724       128 EK  129 (341)
T ss_pred             HH
Confidence            44

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.001  Score=59.81  Aligned_cols=121  Identities=14%  Similarity=0.071  Sum_probs=68.2

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--ccCC---ccceEe
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--IFPL---LVDVSV   73 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--~~~~---~~~i~~   73 (329)
                      ||.+  .+++.|+||+|.+|.+++..|++.|.       +|+++|++    .+.++....++...  ....   ..++.-
T Consensus         1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   69 (260)
T PRK07063          1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGA-------AVALADLD----AALAERAAAAIARDVAGARVLAVPADVTD   69 (260)
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhccCCceEEEEEccCCC
Confidence            5542  46899999999999999999999987       89999998    44444444444321  0000   001110


Q ss_pred             ecCcccc-------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          74 HENPITA-------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        74 ~~~~~~a-------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..+..++       +...|++|..+|.... +  ..+   ....+..|+...    +...+.+.+.  ..+.||+++-
T Consensus        70 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS  145 (260)
T PRK07063         70 AASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER--GRGSIVNIAS  145 (260)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh--CCeEEEEECC
Confidence            0111111       3468999999886421 1  112   223345565544    4444444442  3456666654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.32  E-value=0.0013  Score=58.24  Aligned_cols=124  Identities=21%  Similarity=0.196  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~   77 (329)
                      ||.+.+++.|+||+|++|++++..|++.|.       +|++...+.   .........++........   .++.-..+.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASS---EAGAEALVAEIGALGGKALAVQGDVSDAESV   70 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCc---hhHHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            566668999999999999999999999887       787777652   2122222222221110000   011000011


Q ss_pred             -------ccccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhcC--CCeEEEEEcC
Q psy9582          78 -------ITAFKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVAS--RDVKVLVVGN  134 (329)
Q Consensus        78 -------~~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~~--p~a~viv~tN  134 (329)
                             .+.+.+.|.||+++|.....   ..+.   ...+..|+.....+.+.+.++..  +...+++++.
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         71 ERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence                   11234689999988764321   1122   23345666666666666655421  2345555553

>PRK05865 hypothetical protein; Provisional

Probab=97.31  E-value=0.0016  Score=68.18  Aligned_cols=105  Identities=14%  Similarity=0.139  Sum_probs=69.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|++|++++..|+..|.       +|+++|++.   ......   ...    ....++.-..+..++++++|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~---~~~~~~---~v~----~v~gDL~D~~~l~~al~~vD   63 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHR---PDSWPS---SAD----FIAADIRDATAVESAMTGAD   63 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCc---hhhccc---Cce----EEEeeCCCHHHHHHHHhCCC
Confidence            4799999999999999999999887       899999872   111100   000    00011111123456678999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++++....       ....|+.....+++.+.+.. . ..+|++|.+.
T Consensus        64 ~VVHlAa~~~~-------~~~vNv~GT~nLLeAa~~~g-v-kr~V~iSS~~  105 (854)
T PRK05865         64 VVAHCAWVRGR-------NDHINIDGTANVLKAMAETG-T-GRIVFTSSGH  105 (854)
T ss_pred             EEEECCCcccc-------hHHHHHHHHHHHHHHHHHcC-C-CeEEEECCcH
Confidence            99999865321       34678888888888888763 3 3566777664

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.31  E-value=0.00098  Score=59.72  Aligned_cols=120  Identities=14%  Similarity=0.147  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~----   77 (329)
                      .++|.|+||+|++|..++..|++.|.       +|++.|++    ++.++.....+.+...... ....++  .+.    
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~   78 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRD----PAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAI   78 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHH
Confidence            47999999999999999999999887       89999998    4434333333322110000 000111  011    


Q ss_pred             ---ccccCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          78 ---ITAFKDANIAILIGSFPRK-S--NM---ERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                         .+.+...|+||+.+|.... +  ..   .....+..|+.....+.+.+.++.  +..+.|+++|..
T Consensus        79 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  147 (255)
T PRK07523         79 DAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV  147 (255)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence               1223457999998886431 1  11   123445677665555555554432  134566776653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.31  E-value=0.002  Score=57.70  Aligned_cols=120  Identities=13%  Similarity=0.179  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN----   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~----   76 (329)
                      ..+++.|+||+|.+|.+++..|++.|.       +|++.|++    .+++.....++.+.....   ..++.-..+    
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   76 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDIT----AERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAA   76 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHH
Confidence            346899999999999999999999887       89999998    444443333333211000   001100001    


Q ss_pred             ---cccccCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          77 ---PITAFKDANIAILIGSFPRK-S--NM---ERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        77 ---~~~al~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                         ..+.+...|+||+++|.... +  ..   +....+..|......+.+.+.++.  +..+.|+++|.
T Consensus        77 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  145 (254)
T PRK08085         77 IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS  145 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence               11123457999999886321 1  11   233445666555444444444332  13356666653

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.31  E-value=0.0012  Score=62.06  Aligned_cols=72  Identities=19%  Similarity=0.369  Sum_probs=52.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .++|.|+||+|++|+.++..|... +. .     +|++++++    +++++....++...      ++   .+..+++.+
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv-~-----~lilv~R~----~~rl~~La~el~~~------~i---~~l~~~l~~  215 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGV-A-----ELLLVARQ----QERLQELQAELGGG------KI---LSLEEALPE  215 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCC-C-----EEEEEcCC----HHHHHHHHHHhccc------cH---HhHHHHHcc
Confidence            478999999999999999999864 43 2     89999988    55565444333211      11   135678999


Q ss_pred             ccEEEEeCCCCC
Q psy9582          84 ANIAILIGSFPR   95 (329)
Q Consensus        84 aDiVi~~~g~~~   95 (329)
                      +|+||.+++.+.
T Consensus       216 aDiVv~~ts~~~  227 (340)
T PRK14982        216 ADIVVWVASMPK  227 (340)
T ss_pred             CCEEEECCcCCc
Confidence            999999888765

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.29  E-value=0.0011  Score=60.40  Aligned_cols=95  Identities=18%  Similarity=0.306  Sum_probs=65.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc--
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA--   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a--   84 (329)
                      ||.|+||+|++|++++..|++.|.       +|+++++.    .       .|+.+.           .+..++++++  
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~----~-------~d~~~~-----------~~~~~~~~~~~~   51 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSS----Q-------LDLTDP-----------EALERLLRAIRP   51 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCc----c-------cCCCCH-----------HHHHHHHHhCCC
Confidence            689999999999999999999886       89998775    1       122221           1123445544  


Q ss_pred             cEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||++++......  .........|+.....+++.+.+.. .  .+|++|
T Consensus        52 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~v~~S   99 (287)
T TIGR01214        52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A--RLVHIS   99 (287)
T ss_pred             CEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEe
Confidence            99999987643221  2344567788999999999888753 3  444444

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.29  E-value=0.00055  Score=61.69  Aligned_cols=35  Identities=26%  Similarity=0.346  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|.+.|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~   38 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKS   38 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            457999999999999999999999987       89999988

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.002  Score=57.61  Aligned_cols=119  Identities=17%  Similarity=0.157  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      .++|.|+||+|.+|++++..|++.|.       ++.+. +++    .+.++....++.......   ..++.-..+..++
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~   74 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRN----KQAADETIREIESNGGKAFLIEADLNSIDGVKKL   74 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC----HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHH
Confidence            37999999999999999999999886       77665 444    333332222222110000   0011101111111


Q ss_pred             c-------------CCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 F-------------KDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l-------------~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +             .+.|+||+++|......   .+   ....+..|+.....+.+.+.++....+.++++|-
T Consensus        75 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS  147 (254)
T PRK12746         75 VEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISS  147 (254)
T ss_pred             HHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence            1             35899999988643211   12   2334556777766676666655323345555553

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.28  E-value=0.0015  Score=60.97  Aligned_cols=103  Identities=12%  Similarity=0.216  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..++|+|+|+ |.+|..++..|...+..      +|.++|++    .+++...+..+..       .+....+..+++.+
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~------~V~v~~r~----~~ra~~la~~~g~-------~~~~~~~~~~~l~~  238 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVA------EITIANRT----YERAEELAKELGG-------NAVPLDELLELLNE  238 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCC------EEEEEeCC----HHHHHHHHHHcCC-------eEEeHHHHHHHHhc
Confidence            3589999999 99999999999875542      79999998    4444433333211       11112345677899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      +|+||.+.+.+..            .......   +.....+..+++-+++|-|+-
T Consensus       239 aDvVi~at~~~~~------------~~~~~~~---~~~~~~~~~~viDlavPrdi~  279 (311)
T cd05213         239 ADVVISATGAPHY------------AKIVERA---MKKRSGKPRLIVDLAVPRDIE  279 (311)
T ss_pred             CCEEEECCCCCch------------HHHHHHH---HhhCCCCCeEEEEeCCCCCCc
Confidence            9999998665541            0111221   222111456888999998753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0031  Score=56.41  Aligned_cols=120  Identities=13%  Similarity=0.164  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP---   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~---   77 (329)
                      ..++|.|+||+|.+|.+++..|+..|.       +|.++|++    .+.++....++.......   ..++.-..+.   
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAART----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHH
Confidence            347899999999999999999999987       89999998    333433333333211000   0111100111   


Q ss_pred             ----ccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582          78 ----ITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGN  134 (329)
Q Consensus        78 ----~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tN  134 (329)
                          .+.+...|+||+.+|...  ++  ..+   ....+..|+.....+.+.+.++.. ....||+++.
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS  141 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS  141 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence                122356899999987632  11  122   233455666655555555544311 1235666654

>PRK06196 oxidoreductase; Provisional

Probab=97.27  E-value=0.0017  Score=60.38  Aligned_cols=116  Identities=12%  Similarity=0.068  Sum_probs=66.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC-------c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN-------P   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~-------~   77 (329)
                      .++|.|+||+|++|.+++..|+..|.       +|++.+++    .++++....++.... .+..++.-..+       .
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~----~~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~   93 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARR----PDVAREALAGIDGVE-VVMLDLADLESVRAFAERF   93 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHH
Confidence            36899999999999999999999887       89999998    443432222222110 00001110001       1


Q ss_pred             ccccCCccEEEEeCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITAFKDANIAILIGSFPRKSN----MERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g----~~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .+.....|++|+.+|....+.    ......+..|...    ++.+.+.+.+.  ..+.||++|-
T Consensus        94 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS  156 (315)
T PRK06196         94 LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG--AGARVVALSS  156 (315)
T ss_pred             HhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCeEEEECC
Confidence            112357899999988643211    1233445555554    55555566553  2356666654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.27  E-value=0.00098  Score=59.22  Aligned_cols=34  Identities=26%  Similarity=0.293  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|.+++..|+..|.       +|++++++
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~   39 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDIC   39 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            46899999999999999999999887       89999998

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0012  Score=58.12  Aligned_cols=33  Identities=24%  Similarity=0.333  Sum_probs=30.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+.|+||+|.+|++++..|++.|.       +|++++++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~   33 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGAR   33 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            3799999999999999999999887       89999998

>PRK08643 acetoin reductase; Validated

Probab=97.26  E-value=0.0026  Score=56.96  Aligned_cols=117  Identities=15%  Similarity=0.193  Sum_probs=65.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeec-------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHE-------   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~-------   75 (329)
                      +++.|+||+|.+|.+++..|++.|.       +|+++|++    .+.++....++.+.....   ..+++-..       
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   71 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYN----EETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVR   71 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            4799999999999999999999887       89999988    444433333333211000   00111101       


Q ss_pred             CcccccCCccEEEEeCCCCC-CCC--CC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          76 NPITAFKDANIAILIGSFPR-KSN--ME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~-~~g--~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ...+.+.+.|+||+++|... .+.  .+   ....+..|+...    +.+.+.+.+.. +++.++++|-
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS  139 (256)
T PRK08643         72 QVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG-HGGKIINATS  139 (256)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCEEEEECc
Confidence            11122346799999987642 211  11   223445565543    33444444432 3466666664

>PRK08507 prephenate dehydrogenase; Validated

Probab=97.26  E-value=0.0033  Score=57.46  Aligned_cols=66  Identities=17%  Similarity=0.206  Sum_probs=43.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||. |.+|++++..|...+...     +|+.+|++    .++++.    ..+.  ..   +....+..+ +.++|
T Consensus         1 m~I~iIG~-G~mG~sla~~l~~~g~~~-----~v~~~d~~----~~~~~~----~~~~--g~---~~~~~~~~~-~~~aD   60 (275)
T PRK08507          1 MKIGIIGL-GLMGGSLGLALKEKGLIS-----KVYGYDHN----ELHLKK----ALEL--GL---VDEIVSFEE-LKKCD   60 (275)
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCC-----EEEEEcCC----HHHHHH----HHHC--CC---CcccCCHHH-HhcCC
Confidence            47999998 999999999999887532     78999998    443331    1111  11   111123333 44699


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +||++.
T Consensus        61 ~Vilav   66 (275)
T PRK08507         61 VIFLAI   66 (275)
T ss_pred             EEEEeC
Confidence            999983

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0025  Score=57.44  Aligned_cols=118  Identities=13%  Similarity=0.086  Sum_probs=66.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~~~--   79 (329)
                      .+++.|+||+|++|.+++..|+..|.       +|++++++    .+.++....++....... ...+.++.  +..+  
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAART----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            47899999999999999999999887       89999998    444443333333211000 00111111  1111  


Q ss_pred             -----ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhcCCCeEEEEEcC
Q psy9582          80 -----AFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALN----SVASRDVKVLVVGN  134 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~----~~~~p~a~viv~tN  134 (329)
                           .+...|+||+.+|.....   ..+   ....+..|+.....+.+.+.    +.. ..+.+++++-
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~sS  147 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS-GGGSVINISS  147 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc-CCeEEEEEcc
Confidence                 134679999998753211   112   23345556655555554443    332 3456666654

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0035  Score=56.41  Aligned_cols=122  Identities=20%  Similarity=0.204  Sum_probs=67.6

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~   77 (329)
                      |..+..++.|+||+|.+|..++..|+..|.       +|++++++    .+.+.....++.... .. .....++.  +.
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~   68 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRN----AEKLEALAARLPYPG-RHRWVVADLTSEAGR   68 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence            334457899999999999999999999887       89999998    443433222221100 00 00001110  00


Q ss_pred             ------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          78 ------ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        78 ------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                            .+.+...|+||+++|.....   ..+   ....+..|+.....+.+.+.++.  .+.+.+++++.
T Consensus        69 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS  139 (263)
T PRK09072         69 EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS  139 (263)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence                  01135679999998864321   112   22345567665555555544322  12345666654

>KOG2305|consensus

Probab=97.25  E-value=0.00028  Score=61.45  Aligned_cols=111  Identities=19%  Similarity=0.146  Sum_probs=73.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC----------ccceEe
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL----------LVDVSV   73 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~----------~~~i~~   73 (329)
                      .-||+|+|. |-+|+++|..++..|+       +|.|||+.+.+....++....|+..... ..          +..++.
T Consensus         3 ~~ki~ivgS-gl~g~~WAmlFAs~Gy-------qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~   74 (313)
T KOG2305|consen    3 FGKIAIVGS-GLVGSSWAMLFASSGY-------QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISG   74 (313)
T ss_pred             ccceeEeec-ccccchHHHHHhccCc-------eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhC
Confidence            469999996 9999999999999998       9999999843333333433444433210 11          135667


Q ss_pred             ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      |+++.|..++|=.|=.+              +.+.+...+++.+++.+...|..  |+.|-...+|
T Consensus        75 t~~l~E~vk~Ai~iQEc--------------vpE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~m  124 (313)
T KOG2305|consen   75 TTSLNELVKGAIHIQEC--------------VPEDLNLKKQLYKQLDEIADPTT--ILASSTSTFM  124 (313)
T ss_pred             CccHHHHHhhhhhHHhh--------------chHhhHHHHHHHHHHHHhcCCce--EEeccccccC
Confidence            78888888887443222              34556778888899999875554  3454444333

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=97.24  E-value=0.0022  Score=59.17  Aligned_cols=108  Identities=19%  Similarity=0.193  Sum_probs=64.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC-cccc-----c
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN-PITA-----F   81 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~-~~~a-----l   81 (329)
                      |.|+||+|++|++++..|+..|.-      .+.++|..... .....-...|+.+..        -..+ ..++     +
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~------~v~~~~~~~~~-~~~~~~~~~~~~d~~--------~~~~~~~~~~~~~~~   66 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKDG-TKFVNLVDLDIADYM--------DKEDFLAQIMAGDDF   66 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCc------eEEEecCCCcc-hHHHhhhhhhhhhhh--------hHHHHHHHHhccccc
Confidence            789999999999999999998761      46777875210 000000111222110        0011 1112     2


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .++|+||++|+.+.............|+....++.+.+.+.. .  .+|..|
T Consensus        67 ~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~--~~i~~S  115 (308)
T PRK11150         67 GDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYAS  115 (308)
T ss_pred             CCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C--cEEEEc
Confidence            378999999875433333344567889999999999988753 2  455554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.24  E-value=0.0016  Score=66.95  Aligned_cols=122  Identities=15%  Similarity=0.058  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceEeecCcccc-
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVSVHENPITA-   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~~~~~~~~a-   80 (329)
                      +++||.|+||+|++|++++..|++.+.-     .+|+.+|...  ....+... ...... ...+ ..++.-....... 
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~-----~~V~~~d~~~--~~~~~~~l-~~~~~~~~v~~~~~Dl~d~~~~~~~~   76 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPD-----YKIVVLDKLD--YCSNLKNL-NPSKSSPNFKFVKGDIASADLVNYLL   76 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCC-----CEEEEEeCCC--ccchhhhh-hhcccCCCeEEEECCCCChHHHHHHH
Confidence            4589999999999999999999986321     1899898751  00111100 000000 0000 0011100011112 


Q ss_pred             -cCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 -FKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 -l~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       ..+.|+||++|+.....  .....+....|+.....+++.+++.. .-..+|.+|-
T Consensus        77 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS  132 (668)
T PLN02260         77 ITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVST  132 (668)
T ss_pred             hhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcc
Confidence             25899999998864321  11234566789999999999988763 2235555553

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0017  Score=56.74  Aligned_cols=32  Identities=31%  Similarity=0.209  Sum_probs=29.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|..++..|++. .       +|++++++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~   35 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-------TLLLGGRP   35 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCC
Confidence            58999999999999999999987 4       79999998

>PRK06128 oxidoreductase; Provisional

Probab=97.23  E-value=0.0015  Score=60.30  Aligned_cols=120  Identities=15%  Similarity=0.095  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN------   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~------   76 (329)
                      +++.|+||+|.+|.+++..|+..|.       +|++.+++..  ....+.....+.......   ..++.-..+      
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~  126 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFAREGA-------DIALNYLPEE--EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVE  126 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcc--hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH
Confidence            6899999999999999999999887       8888776511  111222222222211000   001110011      


Q ss_pred             -cccccCCccEEEEeCCCCC--CC--CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 -PITAFKDANIAILIGSFPR--KS--NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 -~~~al~~aDiVi~~~g~~~--~~--g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       ..+.+...|++|+.+|...  .+  ..   .....+..|+.....+++.+.++..+.+.||+++-
T Consensus       127 ~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS  192 (300)
T PRK06128        127 RAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS  192 (300)
T ss_pred             HHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence             1122446899999988642  21  11   23455677887777777777665434556666654

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0026  Score=56.55  Aligned_cols=117  Identities=12%  Similarity=0.041  Sum_probs=64.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~al   81 (329)
                      +++.|+||+|++|.+++..|++.|.       +|.++|++    .+.+.....++........    .++.-..+..+.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   70 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-------RLYLAARD----VERLERLADDLRARGAVAVSTHELDILDTASHAAFL   70 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHH
Confidence            3799999999999999999999887       89999998    3334333333322110000    0111111111122


Q ss_pred             ----CCccEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEc
Q psy9582          82 ----KDANIAILIGSFPRK---SNMERS---ELLAINSSIFIEQGKALNSVA--SRDVKVLVVG  133 (329)
Q Consensus        82 ----~~aDiVi~~~g~~~~---~g~~~~---~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~t  133 (329)
                          +..|++|+.+|....   ...+..   ..+..|+.....+.+.+.++.  ...+.++++|
T Consensus        71 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  134 (243)
T PRK07102         71 DSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS  134 (243)
T ss_pred             HHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence                235999998775321   122332   345566665555555544432  1235566555

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0014  Score=67.21  Aligned_cols=107  Identities=15%  Similarity=0.169  Sum_probs=63.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh--CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEe-----ecCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN--GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSV-----HENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~--~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~-----~~~~   77 (329)
                      |||.|+||+|++|++++..|+.  .+.       +|++++++.  ....+........+.... ...++.-     ....
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   71 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQ--SLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEAD   71 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcc--hHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHH
Confidence            4799999999999999999994  444       899999872  111121111000000000 0001100     0111


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      .+.++++|+||++++... ...+..+....|+...+.+++.+.+.
T Consensus        72 ~~~l~~~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~  115 (657)
T PRK07201         72 IAELGDIDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERL  115 (657)
T ss_pred             HHHhcCCCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhc
Confidence            223489999999987532 12334556678999999999988876

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0031  Score=57.30  Aligned_cols=38  Identities=26%  Similarity=0.358  Sum_probs=33.3

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||. +.+++.|+||+|++|.+++..|++.|.       +|++++++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~   39 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKT   39 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence            553 457899999999999999999999887       89999987

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0014  Score=59.47  Aligned_cols=117  Identities=13%  Similarity=0.049  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------C
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------N   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~   76 (329)
                      +.++|.|+||+|.+|..++..|++.|.       .|.+.+++    .++++....++.... ....++.-..       .
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGA-------RVAIGDLD----EALAKETAAELGLVV-GGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhccce-EEEccCCCHHHHHHHHHH
Confidence            346899999999999999999999887       89999988    444443322222110 0000110000       1


Q ss_pred             cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 PITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..+...+.|++|+.+|.....   ..+   ....+..|+.    ..+.+.+.+.+.  ..+.|+++|-
T Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~g~iv~isS  137 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR--GRGHVVNVAS  137 (273)
T ss_pred             HHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEcC
Confidence            122235789999998864321   111   2334556665    344445555543  3456666653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.19  E-value=0.005  Score=54.84  Aligned_cols=118  Identities=16%  Similarity=0.180  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEee-------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVH-------   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~-------   74 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++    .+.+.....++.+......  ....+.       
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~   79 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGA-------TVILLGRT----EEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNY   79 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCC----HHHHHHHHHHHHhcCCCCceEEEecccCCCHHHH
Confidence            347899999999999999999999886       89999998    4444444444443211100  011111       


Q ss_pred             ----cCcccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHH----HhhhcCCCeEEEEEcC
Q psy9582          75 ----ENPITAFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQGKA----LNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 ----~~~~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i~~~----i~~~~~p~a~viv~tN  134 (329)
                          ....+.+...|+||+.++....  +  ..+   ....+..|+.....+.+.    +.+.  +...|++.+.
T Consensus        80 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~--~~~~iv~~ss  152 (247)
T PRK08945         80 QQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS--PAASLVFTSS  152 (247)
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEEcc
Confidence                0112234467999998875321  1  122   233455666654444443    3432  3456666664

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.19  E-value=0.0031  Score=50.53  Aligned_cols=73  Identities=19%  Similarity=0.259  Sum_probs=46.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +||+|+|++|.+|+.++..+....-+      + +..+|.+    .....+  .|+.+........+.++.++.+.+..+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~------~lv~~v~~~----~~~~~g--~d~g~~~~~~~~~~~v~~~l~~~~~~~   68 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGF------ELVGAVDRK----PSAKVG--KDVGELAGIGPLGVPVTDDLEELLEEA   68 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTE------EEEEEEETT----TSTTTT--SBCHHHCTSST-SSBEBS-HHHHTTH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCc------EEEEEEecC----Cccccc--chhhhhhCcCCcccccchhHHHhcccC
Confidence            58999999999999999999984332      5 4556666    211222  233332211123566678888899999


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+||-.
T Consensus        69 DVvIDf   74 (124)
T PF01113_consen   69 DVVIDF   74 (124)
T ss_dssp             SEEEEE
T ss_pred             CEEEEc
Confidence            999875

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.01  Score=53.59  Aligned_cols=118  Identities=11%  Similarity=0.081  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC-ccceEee--cCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL-LVDVSVH--ENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~-~~~i~~~--~~~~~a   80 (329)
                      .+.+.|+||+|.+|.+++..|++.|.       +|.+.|++    .+.++....++..... .. .....++  .+..+.
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~   76 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRN----EENLKKAREKIKSESNVDVSYIVADLTKREDLERT   76 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence            35789999999999999999999987       89999998    4444433333322100 00 0001111  111111


Q ss_pred             ------cCCccEEEEeCCCCCCC---CCC---HHHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 ------FKDANIAILIGSFPRKS---NME---RSELLAIN----SSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                            +...|++|..+|.+...   ..+   ....+..|    ...++.+.+.+++.  ..+.||++|-.
T Consensus        77 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~--~~g~Ii~isS~  145 (263)
T PRK08339         77 VKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK--GFGRIIYSTSV  145 (263)
T ss_pred             HHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEcCc
Confidence                  23579999988864321   122   22334444    34566667777653  34566666543

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0014  Score=59.36  Aligned_cols=34  Identities=12%  Similarity=0.207  Sum_probs=31.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|++++..|++.|.       +|.+++++
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~   40 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRN   40 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCC
Confidence            47999999999999999999999987       89999987

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.19  E-value=0.0014  Score=58.48  Aligned_cols=38  Identities=16%  Similarity=0.114  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||-+.++|.|+||+|++|++++..|+..|.       +|++.+.+
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~   38 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQ   38 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCC
Confidence            676668999999999999999999999887       78776654

>PLN02253 xanthoxin dehydrogenase

Probab=97.18  E-value=0.0018  Score=58.94  Aligned_cols=34  Identities=18%  Similarity=0.173  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|+++|++
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~   51 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQ   51 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            36799999999999999999999887       89999987

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0028  Score=57.73  Aligned_cols=118  Identities=14%  Similarity=0.103  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~---   78 (329)
                      .+.+.|+||+|++|.+++..|+..|.       +|++.|++    .+.++....++.......   ..++.-..+..   
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~----~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   74 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVD----KPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLA   74 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            45799999999999999999999987       89999998    444443333343211000   01111111111   


Q ss_pred             ----cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          79 ----TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                          +.+...|++|+.+|.....   ..+   ....+..|+.....+.    +.+.+.. ..+.|++++.
T Consensus        75 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~-~~g~iv~isS  143 (275)
T PRK05876         75 DEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG-TGGHVVFTAS  143 (275)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCC
Confidence                1233579999998864311   122   2234556665444444    4444432 2456666654

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.001  Score=59.69  Aligned_cols=122  Identities=14%  Similarity=0.089  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI   78 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~   78 (329)
                      |..++++.|+||+|++|.+++..|++.|.       ++++.+...   .+.+......+.......   ..++.-..+..
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   75 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRS---RDEAEALAAEIRALGRRAVALQADLADEAEVR   75 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            34457899999999999999999999886       788877641   222222222222111000   00111011111


Q ss_pred             cc-------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcC--CCeEEEEEc
Q psy9582          79 TA-------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVAS--RDVKVLVVG  133 (329)
Q Consensus        79 ~a-------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~--p~a~viv~t  133 (329)
                      ++       +...|+||+++|.....   ..+   ....+..|+.....+.+.+.++..  ..+.+++++
T Consensus        76 ~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~  145 (258)
T PRK09134         76 ALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI  145 (258)
T ss_pred             HHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence            12       23469999998864321   122   234566776655555555444321  234555543

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.002  Score=57.18  Aligned_cols=35  Identities=31%  Similarity=0.320  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++++.|+||+|.+|..++..|++.|.       +|++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~   39 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-------DLALVARS   39 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            346899999999999999999999887       89999998

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.001  Score=59.79  Aligned_cols=33  Identities=27%  Similarity=0.364  Sum_probs=30.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|..++..|++.|.       +|+++|++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~   35 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGA-------TLGLVARR   35 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            4799999999999999999999887       89999998

>PRK09186 flagellin modification protein A; Provisional

Probab=97.16  E-value=0.0014  Score=58.50  Aligned_cols=37  Identities=35%  Similarity=0.407  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      || +.+++.|+||+|.+|.+++..|+..|.       +|++.+++
T Consensus         1 ~~-~~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~   37 (256)
T PRK09186          1 ML-KGKTILITGAGGLIGSALVKAILEAGG-------IVIAADID   37 (256)
T ss_pred             CC-CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecC
Confidence            44 457999999999999999999999887       89999987

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.15  E-value=0.0027  Score=56.48  Aligned_cols=117  Identities=16%  Similarity=0.174  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~--   79 (329)
                      .+++.|+||+|++|+.++..|++.|.       +|+++|++    .+.......++.......   ..++.-..+..+  
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   71 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLN----REAAEKVAADIRAKGGNAQAFACDITDRDSVDTAV   71 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            36899999999999999999999887       89999998    333333333333211000   001100011111  


Q ss_pred             -----ccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEcC
Q psy9582          80 -----AFKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKAL----NSVASRDVKVLVVGN  134 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~tN  134 (329)
                           .+...|+||+.+|.....   ..+.   ...+..|+.....+.+.+    ++.  +...+++++.
T Consensus        72 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~iss  139 (250)
T TIGR03206        72 AAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER--GAGRIVNIAS  139 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEECc
Confidence                 123579999988753211   1122   234566666555554444    343  2345555554

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06398 aldose dehydrogenase; Validated

Probab=97.15  E-value=0.0012  Score=59.54  Aligned_cols=116  Identities=8%  Similarity=0.098  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|+++++++.. ...+.....|+.+... . ..  ......+.+...
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~-~~~~~~~~~D~~~~~~-i-~~--~~~~~~~~~~~i   73 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPS-YNDVDYFKVDVSNKEQ-V-IK--GIDYVISKYGRI   73 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccc-cCceEEEEccCCCHHH-H-HH--HHHHHHHHcCCC
Confidence            47899999999999999999999887       89999987311 1111112233332110 0 00  001112234578


Q ss_pred             cEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRK-S--NME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |++|+.+|.... +  ..+   ....+..|+....    .+.+.+.+.  ..+.||+++-
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS  131 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ--DKGVIINIAS  131 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeCc
Confidence            999999886431 1  112   2334556665444    444444442  3456666653

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0016  Score=58.39  Aligned_cols=35  Identities=26%  Similarity=0.360  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|++|++++..|++.|.       +|++++++
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~   44 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVS   44 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            347999999999999999999999887       89999998

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0079  Score=53.69  Aligned_cols=124  Identities=15%  Similarity=0.121  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee-----
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH-----   74 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~-----   74 (329)
                      ||+ .+++.|+||+|++|.+++..|+..|.       +|.+.+.+.   .+.++....++....... .....++     
T Consensus         1 ~~~-~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   69 (252)
T PRK12747          1 MLK-GKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR---KEEAEETVYEIQSNGGSAFSIGANLESLHGV   69 (252)
T ss_pred             CCC-CCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCC---HHHHHHHHHHHHhcCCceEEEecccCCHHHH
Confidence            443 46899999999999999999999887       788875431   233333333332211000 0000000     


Q ss_pred             ----cCccc----c--cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          75 ----ENPIT----A--FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        75 ----~~~~~----a--l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                          .+..+    .  ....|++|+.+|.... +  ..+   ....+..|+.....+.+.+.+.....+.||++|--
T Consensus        70 ~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~  146 (252)
T PRK12747         70 EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA  146 (252)
T ss_pred             HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence                00111    1  1268999999886321 1  112   23445667665555555444432234566666543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.13  E-value=0.0042  Score=56.41  Aligned_cols=33  Identities=21%  Similarity=0.323  Sum_probs=30.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|.+++..|+..|.       +|+++|++
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~   43 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGA-------KVAILDRN   43 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            6899999999999999999999887       89999998

>PRK06182 short chain dehydrogenase; Validated

Probab=97.13  E-value=0.0019  Score=58.55  Aligned_cols=113  Identities=11%  Similarity=0.041  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA---   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a---   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.+++    .+++....    ...... ..++.-..+..+.   
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~l~~~~----~~~~~~~~~Dv~~~~~~~~~~~~   67 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY-------TVYGAARR----VDKMEDLA----SLGVHPLSLDVTDEASIKAAVDT   67 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHH----hCCCeEEEeeCCCHHHHHHHHHH
Confidence            36899999999999999999999887       89999988    43333211    100000 0111111111122   


Q ss_pred             ----cCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 ----FKDANIAILIGSFPRK-S--NM---ERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 ----l~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                          ..+.|++|+.+|.... +  ..   .....+..|...    ++.+.+.+++..  .+.|++++-
T Consensus        68 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS  133 (273)
T PRK06182         68 IIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISS  133 (273)
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcc
Confidence                2378999999886431 1  11   233445556544    555666666542  345566653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.13  E-value=0.0039  Score=56.19  Aligned_cols=105  Identities=15%  Similarity=0.216  Sum_probs=63.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-CccE
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-DANI   86 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-~aDi   86 (329)
                      |+|+||+|.||+++...|.+.|.       +|.++-++    ..+....   + +.      .++.-..+.+... ++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~----~~~~~~~---~-~~------~v~~~~~~~~~~~~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRR----PPKASQN---L-HP------NVTLWEGLADALTLGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC-------eEEEEEcC----Ccchhhh---c-Cc------cccccchhhhcccCCCCE
Confidence            68999999999999999999988       89999988    3322211   1 10      1111112222333 7999


Q ss_pred             EEEeCCCCC--CC-CCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          87 AILIGSFPR--KS-NME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        87 Vi~~~g~~~--~~-g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ||..||.|-  +. ... ...+..--+...+.+.+.|.+.-.+-..+|+.|
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaS  110 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISAS  110 (297)
T ss_pred             EEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecc
Confidence            999999763  21 111 223344455677777777775432222445544

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0055  Score=57.63  Aligned_cols=116  Identities=14%  Similarity=0.111  Sum_probs=66.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCcc----
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPI----   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~----   78 (329)
                      ++|.|+||+|.+|..++..|+..|.       +|++++++    .++++....++........ ....++  .+..    
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~----~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~   77 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGA-------KVVLLARG----EEGLEALAAEIRAAGGEALAVVADVADAEAVQAAAD   77 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHH
Confidence            6899999999999999999999987       89999998    4555544444432210100 001111  1111    


Q ss_pred             ---cccCCccEEEEeCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ---TAFKDANIAILIGSFPRKS---NMER---SELLAIN----SSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ---~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                         +.+...|++|+.+|.....   ..+.   ...+..|    +...+.+.+.+.+.  ..+.||+++-
T Consensus        78 ~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~--~~g~iV~isS  144 (334)
T PRK07109         78 RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR--DRGAIIQVGS  144 (334)
T ss_pred             HHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEeCC
Confidence               1234679999988864211   1121   2233444    33455566666653  2356666653

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.12  E-value=0.0029  Score=55.04  Aligned_cols=34  Identities=26%  Similarity=0.545  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|+|+ |.+|+.++..|+..|. +     +|+|+|.+
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gv-g-----~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGI-G-----KLILVDFD   54 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCC-C-----EEEEECCC
Confidence            468999999 9999999999999987 3     79999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.12  E-value=0.0078  Score=53.92  Aligned_cols=118  Identities=8%  Similarity=0.097  Sum_probs=66.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CC-ccceEeec--Ccc--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PL-LVDVSVHE--NPI--   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~-~~~i~~~~--~~~--   78 (329)
                      ++|.|+||+|.+|.+++..|++.|.       +|+++|++    ...++....++.....  .. .....++.  +..  
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   71 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADIN----SEKAANVAQEINAEYGEGMAYGFGADATSEQSVLAL   71 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHH
Confidence            4799999999999999999999887       89999988    3333333223322110  00 00111111  111  


Q ss_pred             -----cccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 -----TAFKDANIAILIGSFPRKS---NMER---SELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 -----~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           +.+...|+||+++|.+...   ..+.   ...+..|+..    .+.+.+.+.+.. +++.+++++..
T Consensus        72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~~ss~  142 (259)
T PRK12384         72 SRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQINSK  142 (259)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEEecCc
Confidence                 1124579999998865421   1222   2334455554    445555555432 34577776654

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=97.12  E-value=0.00061  Score=61.90  Aligned_cols=120  Identities=16%  Similarity=0.176  Sum_probs=76.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC----CCCCCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      .||.|.|| |..|..++.+|...    |+- .++ .-.++++|.+-  .++...+......+.+..    .. ....++.
T Consensus        26 ~~iv~~GA-GsAg~gia~ll~~~~~~~G~~-~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~----~~-~~~~~L~   98 (279)
T cd05312          26 QRILFLGA-GSAGIGIADLIVSAMVREGLS-EEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD----EE-KEGKSLL   98 (279)
T ss_pred             cEEEEECc-CHHHHHHHHHHHHHHHHcCCC-hhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc----Cc-ccCCCHH
Confidence            69999999 99999999988765    652 111 12899999871  000111211222222111    00 1235788


Q ss_pred             cccC--CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582          79 TAFK--DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA  147 (329)
Q Consensus        79 ~al~--~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~  147 (329)
                      ++++  ++|++|=+.+.+   |           -+.+++.+.|.+++ ++.+|.-.|||..   +...-+.+.+
T Consensus        99 e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~-~~PIIFaLSNPt~~~E~~pe~a~~~t  157 (279)
T cd05312          99 EVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSN-ERPIIFALSNPTSKAECTAEDAYKWT  157 (279)
T ss_pred             HHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcC-CCCEEEECCCcCCccccCHHHHHHhh
Confidence            9999  899988654433   2           25567788888887 8899999999974   5555566655

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0023  Score=58.06  Aligned_cols=115  Identities=12%  Similarity=0.082  Sum_probs=64.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--Cc------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NP------   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~------   77 (329)
                      +++.|+||+|++|++++..|++.|.       .|.+++++    .+.+........... .. ....++.  +.      
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~   69 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRR----PDALDDLKARYGDRL-WV-LQLDVTDSAAVRAVVDR   69 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHhccCce-EE-EEccCCCHHHHHHHHHH
Confidence            4799999999999999999999887       89999987    333322111110000 00 0011111  11      


Q ss_pred             -ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEc
Q psy9582          78 -ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVG  133 (329)
Q Consensus        78 -~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~t  133 (329)
                       .+.+.+.|+||+++|......   .+   ....+..|+.....+.+.+.++.  ...+.+|++|
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s  134 (276)
T PRK06482         70 AFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS  134 (276)
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence             112346799999988654211   11   23455677777777776653221  1233555554

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0016  Score=57.86  Aligned_cols=117  Identities=16%  Similarity=0.187  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK---   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~---   82 (329)
                      .++.|+||+|++|..++..|+..|.       +|.++|++    .++++.......+.. ....+++-..+..++++   
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-------QVIACGRN----QSVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLP   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcc
Confidence            4699999999999999999999887       89999998    444432211111100 00001111111122222   


Q ss_pred             -CccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 -DANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 -~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       .-|.+|+.+|.... +  ..+   ....+..|......+.+.+.....+...+++++.
T Consensus        70 ~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS  128 (240)
T PRK06101         70 FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS  128 (240)
T ss_pred             cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence             24777777664321 1  122   2345677877777777766654323445555543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.11  E-value=0.00065  Score=59.79  Aligned_cols=165  Identities=16%  Similarity=0.154  Sum_probs=91.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH-hhhhhcccCCccceEeecCcccccCCc--
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI-MEIEDCIFPLLVDVSVHENPITAFKDA--   84 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~-~dl~~~~~~~~~~i~~~~~~~~al~~a--   84 (329)
                      |.|+||+|++|++++..|+..+.       +++.+....   ........ .++....    .++.-.....+.+++.  
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~----~dl~~~~~~~~~~~~~~~   66 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSS---NSESFEEKKLNVEFVI----GDLTDKEQLEKLLEKANI   66 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCS---TGGHHHHHHTTEEEEE----SETTSHHHHHHHHHHHTE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC-------ccccccccc---cccccccccceEEEEE----eeccccccccccccccCc
Confidence            78999999999999999999987       766555552   11111010 0111000    0111112234556666  


Q ss_pred             cEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHH----HHHHCCCCCCCcEEEe
Q psy9582          85 NIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYI----TMKSAPDLSYKNFTAM  158 (329)
Q Consensus        85 DiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~----~~~~~~~~~~~~i~~~  158 (329)
                      |.||++++.+.  .......+....|+...+.+.+.+.+.. . ..+|..+.. .+....    +.+.+ .+.+....+.
T Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~i~~sS~-~~y~~~~~~~~~e~~-~~~~~~~Y~~  142 (236)
T PF01370_consen   67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-V-KRFIFLSSA-SVYGDPDGEPIDEDS-PINPLSPYGA  142 (236)
T ss_dssp             SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-T-SEEEEEEEG-GGGTSSSSSSBETTS-GCCHSSHHHH
T ss_pred             eEEEEeecccccccccccccccccccccccccccccccccc-c-ccccccccc-ccccccccccccccc-cccccccccc
Confidence            99999987653  1113456778899999999999999984 4 345555432 110000    00000 0001111223


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      +-....++....+++.+++...++...+.|-+
T Consensus       143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred             cccccccccccccccccccccccccccccccc
Confidence            33333455555666667777777776677765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK12320 hypothetical protein; Provisional

Probab=97.10  E-value=0.0018  Score=66.34  Aligned_cols=101  Identities=10%  Similarity=0.124  Sum_probs=64.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|++|++++..|+..|.       +|+.+|+.    ......  .++. .   ...++.-. ...++++++|
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~----~~~~~~--~~ve-~---v~~Dl~d~-~l~~al~~~D   62 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQH----PHDALD--PRVD-Y---VCASLRNP-VLQELAGEAD   62 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCC----hhhccc--CCce-E---EEccCCCH-HHHHHhcCCC
Confidence            4899999999999999999999887       89999986    211100  0000 0   00011101 1345678899


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++++...  ..    ....|+....++++.+++.. .  .+|.+|
T Consensus        63 ~VIHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G-v--RiV~~S  101 (699)
T PRK12320         63 AVIHLAPVDT--SA----PGGVGITGLAHVANAAARAG-A--RLLFVS  101 (699)
T ss_pred             EEEEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC-C--eEEEEE
Confidence            9999986521  11    12468888888988888763 3  444544

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.10  E-value=0.0033  Score=58.75  Aligned_cols=46  Identities=26%  Similarity=0.346  Sum_probs=38.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE   61 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~   61 (329)
                      ...+.|+||+|++|.++|..|++.|.       +|.+++++    .++++....++.
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~----~~~l~~~~~~l~   98 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARN----PDKLKDVSDSIQ   98 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECC----HHHHHHHHHHHH
Confidence            36789999999999999999999987       89999999    556665555554

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.10  E-value=0.00055  Score=60.75  Aligned_cols=73  Identities=16%  Similarity=0.288  Sum_probs=46.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc-cCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA-FKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a-l~~a   84 (329)
                      |+++|+|+ |.+|+++|..|...|.       +|+++|.+    +++++....+-.+.. ....+-+-..-+.++ +.++
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~-------~Vv~Id~d----~~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~a   67 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH-------NVVLIDRD----EERVEEFLADELDTH-VVIGDATDEDVLEEAGIDDA   67 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC-------ceEEEEcC----HHHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCcC
Confidence            58999999 9999999999999988       89999999    555543222111111 000011011123333 7889


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |.++.+.
T Consensus        68 D~vva~t   74 (225)
T COG0569          68 DAVVAAT   74 (225)
T ss_pred             CEEEEee
Confidence            9999874

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0022  Score=57.42  Aligned_cols=38  Identities=16%  Similarity=0.130  Sum_probs=33.4

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||. +.+++.|+||+|.+|.+++..|+..|.       +|+++|++
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~   39 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRR   39 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            453 457899999999999999999999887       89999998

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0068  Score=53.68  Aligned_cols=109  Identities=19%  Similarity=0.230  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c--cceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L--VDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~--~~i~~~~~~~~a-   80 (329)
                      .++|.|+||+|++|.+++..|++.|.       ++++++.......+.+.....++....... .  .++.-..+..+. 
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAAL   78 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            47899999999999999999999887       899988652111222222222222111000 0  000000111111 


Q ss_pred             ------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHh
Q psy9582          81 ------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALN  120 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~  120 (329)
                            ....|.||+++|.... +  ..+   ....+..|......+++.+.
T Consensus        79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (249)
T PRK12827         79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL  130 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence                  2468999999886441 1  112   22345677777777776665

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0028  Score=57.39  Aligned_cols=116  Identities=14%  Similarity=0.120  Sum_probs=64.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCcc----
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPI----   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~----   78 (329)
                      ++|.|+||+|.+|+.++..|++.|.       +|.+.+++    .+.++....++....... ......+  .+..    
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   69 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVN----EEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQ   69 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            3699999999999999999999987       89999988    444443333333211000 0000110  0111    


Q ss_pred             ---cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ---TAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ---~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                         +.+...|+||+.+|.....   ..+   ....+..|+.    ..+.+.+.+++.  ..+.|+++|-
T Consensus        70 ~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS  136 (270)
T PRK05650         70 ACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ--KSGRIVNIAS  136 (270)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEECC
Confidence               1234689999998864321   112   2234556654    334444555553  2345556553

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.09  E-value=0.0022  Score=59.25  Aligned_cols=114  Identities=14%  Similarity=0.131  Sum_probs=65.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC--
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK--   82 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~--   82 (329)
                      ||.|+||+|++|+.++..|++.+.       +|+++|...   ..... ....+.+.. ... ..++.-..+..++++  
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   69 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLS---NGSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEH   69 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCC---ccchh-hhhhhccccceEEEECCCCCHHHHHHHHHhC
Confidence            689999999999999999999886       788888641   11111 111111100 000 001111112223333  


Q ss_pred             CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.|+||+++|.....  .....+.+..|+.....+++.+.+.. .. .++++|
T Consensus        70 ~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~s  120 (328)
T TIGR01179        70 KIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VK-KFIFSS  120 (328)
T ss_pred             CCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CC-EEEEec
Confidence            689999998864321  12333456788888899988888763 33 344444

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0043  Score=55.40  Aligned_cols=79  Identities=15%  Similarity=0.132  Sum_probs=47.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~~al~   82 (329)
                      ++|.|+||+|.+|..++..|++.|.       +|++.+++    ...+.....+......... ....++  .+..+++.
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQI----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE   71 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc
Confidence            3799999999999999999999887       89998887    3323222111111110110 011111  12223343


Q ss_pred             -CccEEEEeCCCCC
Q psy9582          83 -DANIAILIGSFPR   95 (329)
Q Consensus        83 -~aDiVi~~~g~~~   95 (329)
                       +.|+||+.+|...
T Consensus        72 ~~id~vi~~ag~~~   85 (257)
T PRK09291         72 WDVDVLLNNAGIGE   85 (257)
T ss_pred             CCCCEEEECCCcCC
Confidence             7999999988653

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0066  Score=55.11  Aligned_cols=33  Identities=15%  Similarity=0.181  Sum_probs=30.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.|+||+|.+|.+++..|+..|.       +|++++++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~   36 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRN   36 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCC
Confidence            4799999999999999999999887       89999987

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.005  Score=55.16  Aligned_cols=106  Identities=16%  Similarity=0.041  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      +..++.|+||+|.+|.+++..|++.|.       ++++.+++    .... ....++.......   ..++.-..+..+.
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~----~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRS----APDD-EFAEELRALQPRAEFVQVDLTDDAQCRDA   73 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCC----hhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            346899999999999999999999987       78999887    3333 2233333211010   0111101111122


Q ss_pred             c-------CCccEEEEeCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhh
Q psy9582          81 F-------KDANIAILIGSFPRKSN-----MERSELLAINSSIFIEQGKALNS  121 (329)
Q Consensus        81 l-------~~aDiVi~~~g~~~~~g-----~~~~~~~~~n~~~~~~i~~~i~~  121 (329)
                      +       ...|+||+++|......     .+....+..|+.....+.+.+.+
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (258)
T PRK08628         74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLP  126 (258)
T ss_pred             HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            2       35799999988543221     12334456676655555554443

>KOG1205|consensus

Probab=97.07  E-value=0.0035  Score=57.20  Aligned_cols=120  Identities=16%  Similarity=0.208  Sum_probs=79.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEeecC--
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVHEN--   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~~~--   76 (329)
                      ..+.|.|+|||+++|.++|+.|+..|.       .++|+.+.    .++++....++....... .    .+++-..+  
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~----~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~   79 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARR----ARRLERVAEELRKLGSLEKVLVLQLDVSDEESVK   79 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehh----hhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHH
Confidence            357889999999999999999999998       78999888    666765556665433111 0    11111111  


Q ss_pred             -----cccccCCccEEEEeCCCCCCCCC----C---HHHHHHH----HHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          77 -----PITAFKDANIAILIGSFPRKSNM----E---RSELLAI----NSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        77 -----~~~al~~aDiVi~~~g~~~~~g~----~---~~~~~~~----n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                           ...-+.+.|+.|.-||..+ .+.    +   ....++.    .+...+...+.|++. + ++-|++++...+
T Consensus        80 ~~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-~-~GhIVvisSiaG  153 (282)
T KOG1205|consen   80 KFVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-N-DGHIVVISSIAG  153 (282)
T ss_pred             HHHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-C-CCeEEEEecccc
Confidence                 1234679999999999877 321    1   2223443    456778888888886 3 677777776554

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=97.07  E-value=0.0017  Score=64.08  Aligned_cols=100  Identities=14%  Similarity=0.149  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--   82 (329)
                      ..+|++||- |.||+++|..|+..|.       +|++||++    .++.+..+.......   ...+....+..+..+  
T Consensus         6 ~~~IG~IGL-G~MG~~mA~nL~~~G~-------~V~V~NRt----~~k~~~l~~~~~~~G---a~~~~~a~s~~e~v~~l   70 (493)
T PLN02350          6 LSRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRT----TSKVDETVERAKKEG---NLPLYGFKDPEDFVLSI   70 (493)
T ss_pred             CCCEEEEee-HHHHHHHHHHHHhCCC-------eEEEECCC----HHHHHHHHHhhhhcC---CcccccCCCHHHHHhcC
Confidence            468999998 9999999999999998       89999998    555443221111101   011223334444444  


Q ss_pred             -CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 -DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 -~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       .+|+||++-...               +.++++...+.....++.++|-.||
T Consensus        71 ~~~dvIi~~v~~~---------------~aV~~Vi~gl~~~l~~G~iiID~sT  108 (493)
T PLN02350         71 QKPRSVIILVKAG---------------APVDQTIKALSEYMEPGDCIIDGGN  108 (493)
T ss_pred             CCCCEEEEECCCc---------------HHHHHHHHHHHhhcCCCCEEEECCC
Confidence             599999973211               2444444444444457778888886

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.07  E-value=0.0024  Score=52.73  Aligned_cols=74  Identities=11%  Similarity=0.157  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|+|+ |.+|..++..|...+ ..     +|.++|++    .++++..+.++...   . .... ..+..+.++++
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g-~~-----~v~v~~r~----~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~   82 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELG-AA-----KIVIVNRT----LEKAKALAERFGEL---G-IAIA-YLDLEELLAEA   82 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC-CC-----EEEEEcCC----HHHHHHHHHHHhhc---c-ccee-ecchhhccccC
Confidence            579999998 999999999999876 22     89999998    44444333333211   0 0111 23445668999


Q ss_pred             cEEEEeCCCC
Q psy9582          85 NIAILIGSFP   94 (329)
Q Consensus        85 DiVi~~~g~~   94 (329)
                      |+||.+....
T Consensus        83 Dvvi~~~~~~   92 (155)
T cd01065          83 DLIINTTPVG   92 (155)
T ss_pred             CEEEeCcCCC
Confidence            9999986543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=97.06  E-value=0.0027  Score=62.39  Aligned_cols=101  Identities=11%  Similarity=0.139  Sum_probs=64.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---cccccCC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---PITAFKD   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---~~~al~~   83 (329)
                      +|+|||. |.||.++|..|+..|.       +|.+||++    .++++........   .  ..+....+   ..+.+++
T Consensus         1 ~IG~IGL-G~MG~~mA~nL~~~G~-------~V~v~drt----~~~~~~l~~~~~~---g--~~~~~~~s~~e~v~~l~~   63 (467)
T TIGR00873         1 DIGVIGL-AVMGSNLALNMADHGF-------TVSVYNRT----PEKTDEFLAEHAK---G--KKIVGAYSIEEFVQSLER   63 (467)
T ss_pred             CEEEEee-HHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHhhccC---C--CCceecCCHHHHHhhcCC
Confidence            4899998 9999999999999997       89999998    5544432211000   0  01222222   2334567


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC--chhhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN--PVNTN  139 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN--P~~~~  139 (329)
                      +|+|+++...    +           +.+.++.+.+..+.+++.+||-.+|  |.+..
T Consensus        64 ~dvIil~v~~----~-----------~~v~~Vi~~l~~~L~~g~iIID~gns~~~~t~  106 (467)
T TIGR00873        64 PRKIMLMVKA----G-----------APVDAVINQLLPLLEKGDIIIDGGNSHYPDTE  106 (467)
T ss_pred             CCEEEEECCC----c-----------HHHHHHHHHHHhhCCCCCEEEECCCcCHHHHH
Confidence            9998887311    1           3445555666666557778888886  55543

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>KOG1201|consensus

Probab=97.06  E-value=0.0065  Score=55.38  Aligned_cols=116  Identities=12%  Similarity=0.086  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cCCc------cceEee-c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FPLL------VDVSVH-E   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~~~------~~i~~~-~   75 (329)
                      ...|.|+||++.+|..+|.++++.+-       .++|+|+|.    +-.+..+..+++..  ..+.      .++.-+ .
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~----~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~  106 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINK----QGNEETVKEIRKIGEAKAYTCDISDREEIYRLAK  106 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEeccc----cchHHHHHHHHhcCceeEEEecCCCHHHHHHHHH
Confidence            35789999988999999999999987       899999993    33333344444321  0010      111111 1


Q ss_pred             CcccccCCccEEEEeCCCC-CCCC--CCHH---HHHHHHH----HHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPITAFKDANIAILIGSFP-RKSN--MERS---ELLAINS----SIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~-~~~g--~~~~---~~~~~n~----~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..++...+.|++|.-||.- -++.  .+++   ..++.|+    ..++.+.+.|.+.  .++-|+.++
T Consensus       107 ~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~--~~GHIV~Ia  172 (300)
T KOG1201|consen  107 KVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN--NNGHIVTIA  172 (300)
T ss_pred             HHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc--CCceEEEeh
Confidence            3456678999999988863 3332  2322   2233343    4778888999985  455555543

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0023  Score=57.26  Aligned_cols=118  Identities=18%  Similarity=0.160  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP---   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~---   77 (329)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.+++    .+.++....++.+.....   ..++.-..+.   
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARH----LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSM   76 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            347899999999999999999999987       89999998    444444433343211000   0011000111   


Q ss_pred             ----ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEc
Q psy9582          78 ----ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVG  133 (329)
Q Consensus        78 ----~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~t  133 (329)
                          .+.+...|++|+.+|.... +  ..+   ....+..|+.....+    .+.+.+.. ..+.+++++
T Consensus        77 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~s  145 (253)
T PRK05867         77 LDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG-QGGVIINTA  145 (253)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC-CCcEEEEEC
Confidence                1223478999999886431 1  112   223345555544444    44444321 234565554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.04  E-value=0.0027  Score=56.56  Aligned_cols=124  Identities=16%  Similarity=0.190  Sum_probs=64.6

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEee--
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVH--   74 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~--   74 (329)
                      ||+ +..+|.|+||+|++|++++..|++.+.       ++++...+.   .+.......++.......   ..+++-.  
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKR---AEEMNETLKMVKENGGEGIGVLADVSTREG   70 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC---hHHHHHHHHHHHHcCCeeEEEEeccCCHHH
Confidence            664 457999999999999999999999887       676655431   222222222222110000   0011100  


Q ss_pred             -----cCcccccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          75 -----ENPITAFKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 -----~~~~~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                           .+..+.+...|+||+++|.....   +.+.   ...+..|......+++.+.++..+.+.+|+++.
T Consensus        71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (252)
T PRK06077         71 CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS  141 (252)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence                 11112235679999998863211   1122   233455555545555554444323356666653

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=97.02  E-value=0.012  Score=53.91  Aligned_cols=67  Identities=15%  Similarity=0.350  Sum_probs=43.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhcccCCccceEeecC-cccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCIFPLLVDVSVHEN-PITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~~~~~~~i~~~~~-~~~al~   82 (329)
                      .++|+|+|. |-||..++..|...|.       .+..++.+..  ...++ +..+++.+         +.+.+ ..++.+
T Consensus         3 ~~~v~IvG~-GliG~s~a~~l~~~g~-------~v~i~g~d~~--~~~~~~a~~lgv~d---------~~~~~~~~~~~~   63 (279)
T COG0287           3 SMKVGIVGL-GLMGGSLARALKEAGL-------VVRIIGRDRS--AATLKAALELGVID---------ELTVAGLAEAAA   63 (279)
T ss_pred             CcEEEEECC-chHHHHHHHHHHHcCC-------eEEEEeecCc--HHHHHHHhhcCccc---------ccccchhhhhcc
Confidence            468999998 9999999999999998       6677777621  11111 11112211         11122 257888


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +||+||++
T Consensus        64 ~aD~Viva   71 (279)
T COG0287          64 EADLVIVA   71 (279)
T ss_pred             cCCEEEEe
Confidence            99999998

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.02  E-value=0.0031  Score=57.06  Aligned_cols=69  Identities=9%  Similarity=0.147  Sum_probs=47.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.+|++++..|...+...    ..+.++|++    .++++.    +.+..    ..+....+..+.++++|
T Consensus         1 m~IgiIG~-G~mG~aia~~L~~~g~~~----~~i~v~~r~----~~~~~~----l~~~~----~~~~~~~~~~~~~~~aD   63 (258)
T PRK06476          1 MKIGFIGT-GAITEAMVTGLLTSPADV----SEIIVSPRN----AQIAAR----LAERF----PKVRIAKDNQAVVDRSD   63 (258)
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCh----heEEEECCC----HHHHHH----HHHHc----CCceEeCCHHHHHHhCC
Confidence            37999998 999999999999876411    157888887    444332    22110    12334456667788999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +||++.
T Consensus        64 vVilav   69 (258)
T PRK06476         64 VVFLAV   69 (258)
T ss_pred             EEEEEe
Confidence            999983

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.013  Score=54.13  Aligned_cols=118  Identities=14%  Similarity=0.039  Sum_probs=66.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cCC---ccceEeecCc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FPL---LVDVSVHENP--   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~~---~~~i~~~~~~--   77 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|++++++    .++......++....  ...   ..++.-..+.  
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~   84 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRN----LDKGKAAAARITAATPGADVTLQELDLTSLASVRA   84 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHH
Confidence            36899999999999999999999887       89999988    333332222332110  000   0011000011  


Q ss_pred             -----ccccCCccEEEEeCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 -----ITAFKDANIAILIGSFPRKSN----MERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 -----~~al~~aDiVi~~~g~~~~~g----~~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           .+.+...|++|+.+|....+.    ......+..|...    .+.+.+.+++.  ..+.||++|-.
T Consensus        85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS~  153 (306)
T PRK06197         85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV--PGSRVVTVSSG  153 (306)
T ss_pred             HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEECCH
Confidence                 112346899999988532111    1222345555554    66666666654  34566666643

>PRK07069 short chain dehydrogenase; Validated

Probab=97.02  E-value=0.0031  Score=56.13  Aligned_cols=116  Identities=18%  Similarity=0.194  Sum_probs=67.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-Cc--cceEeec--C-----
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LL--VDVSVHE--N-----   76 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~--~~i~~~~--~-----   76 (329)
                      ||.|+||+|.+|.+++..|+..|.       +|++.+++.   .+.++....++...... ..  ....++.  +     
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   70 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDIND---AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALL   70 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc---chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHH
Confidence            589999999999999999999887       899999871   22233333233221100 00  0011111  1     


Q ss_pred             --cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 --PITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                        ..+.+...|+||+.+|.....   ..+   ....+..|+.    .++.+.+.+++.  +.+.|+++|.
T Consensus        71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~ss  138 (251)
T PRK07069         71 AQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS--QPASIVNISS  138 (251)
T ss_pred             HHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCcEEEEecC
Confidence              112245679999998864321   112   2334556766    677777777764  3345666654

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.01  Score=53.81  Aligned_cols=119  Identities=14%  Similarity=0.145  Sum_probs=66.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeec--------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHE--------   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~--------   75 (329)
                      +++.|+||+|.+|..++..|+..|.       +|++++++    .+.++....++........  ....++.        
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   69 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRD----ADGLAQTVADARALGGTVPEHRALDISDYDAVAAFA   69 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHH
Confidence            3699999999999999999999886       89999988    4444433333332110000  0111110        


Q ss_pred             -CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcCc
Q psy9582          76 -NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGNP  135 (329)
Q Consensus        76 -~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tNP  135 (329)
                       ...+.+...|+||+++|.....   ..+   ....+..|+.....+++.+..+.   +..+.|++++-.
T Consensus        70 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~  139 (272)
T PRK07832         70 ADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA  139 (272)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc
Confidence             1112345689999998864311   122   23345566665555554433211   234566666543

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.011  Score=53.29  Aligned_cols=121  Identities=11%  Similarity=0.108  Sum_probs=67.9

Q ss_pred             CCCC---CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-Cc--cceEee
Q psy9582           1 MLKK---PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LL--VDVSVH   74 (329)
Q Consensus         1 ~~~~---~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~--~~i~~~   74 (329)
                      ||+.   .+.+.|+||+|.+|.+++..|+..|.       +|++.+++    .++++....++...... ..  ....++
T Consensus         1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~   69 (265)
T PRK07062          1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRD----EERLASAEARLREKFPGARLLAARCDVL   69 (265)
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhhCCCceEEEEEecCC
Confidence            5543   36899999999999999999999887       89999998    44444333333321100 00  001111


Q ss_pred             c--Cc-------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          75 E--NP-------ITAFKDANIAILIGSFPRKS---NME---RSELLAIN----SSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 ~--~~-------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .  +.       .+.+...|++|..+|.....   ..+   ....+..|    ....+.+.+.+++.  ..+.|++++-
T Consensus        70 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS  146 (265)
T PRK07062         70 DEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS--AAASIVCVNS  146 (265)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc--CCcEEEEecc
Confidence            1  11       11234679999998864311   112   22233334    33455566666653  2456666543

>PLN02712 arogenate dehydrogenase

Probab=97.01  E-value=0.0074  Score=61.95  Aligned_cols=92  Identities=15%  Similarity=0.155  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc-C
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF-K   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al-~   82 (329)
                      +++||+|||. |.+|..++..|...|.       +|..+|++    ....  .+.++         .+....+..+.+ +
T Consensus        51 ~~~kIgIIG~-G~mG~slA~~L~~~G~-------~V~~~dr~----~~~~--~A~~~---------Gv~~~~d~~e~~~~  107 (667)
T PLN02712         51 TQLKIAIIGF-GNYGQFLAKTLISQGH-------TVLAHSRS----DHSL--AARSL---------GVSFFLDPHDLCER  107 (667)
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHCCC-------EEEEEeCC----HHHH--HHHHc---------CCEEeCCHHHHhhc
Confidence            3579999998 9999999999998885       89999987    2211  11111         122334445534 5


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN-SVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~-~~~~p~a~viv~tN  134 (329)
                      +||+||++.  |-              ..+.++++.+. .+.+++++|+.++.
T Consensus       108 ~aDvViLav--P~--------------~~~~~vl~~l~~~~l~~g~iVvDv~S  144 (667)
T PLN02712        108 HPDVILLCT--SI--------------ISTENVLKSLPLQRLKRNTLFVDVLS  144 (667)
T ss_pred             CCCEEEEcC--CH--------------HHHHHHHHhhhhhcCCCCeEEEECCC
Confidence            799999982  11              23444444443 33346788777763

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.01  E-value=0.0044  Score=57.11  Aligned_cols=110  Identities=12%  Similarity=0.115  Sum_probs=66.2

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc----ccCC
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT----AFKD   83 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~----al~~   83 (329)
                      |.|+||+|++|++++..|...|..      +|.++|....  ...+.    .+...  .....+........    .+.+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~------~v~~~~~~~~--~~~~~----~~~~~--~~~~d~~~~~~~~~~~~~~~~~   66 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGIT------DILVVDNLRD--GHKFL----NLADL--VIADYIDKEDFLDRLEKGAFGK   66 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCc------eEEEEecCCC--chhhh----hhhhe--eeeccCcchhHHHHHHhhccCC
Confidence            579999999999999999988752      6888887621  11111    11100  00001111111111    2358


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .|+||++++.......+.......|+.....+++.+.+.. .  .+|.+|.
T Consensus        67 ~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~--~~v~~SS  114 (314)
T TIGR02197        67 IEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I--PFIYASS  114 (314)
T ss_pred             CCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C--cEEEEcc
Confidence            9999999886432223445567789999999999888763 3  3555553

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0084  Score=53.81  Aligned_cols=100  Identities=17%  Similarity=0.065  Sum_probs=58.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +++.|+||+|.+|.+++..|+..|.       +|++++++.   .+.++ ...+  ........++.-..+..+.+...|
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~---~~~~~-~~~~--~~~~~~~~D~~~~~~~~~~~~~iD   81 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSK---INNSE-SNDE--SPNEWIKWECGKEESLDKQLASLD   81 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCc---hhhhh-hhcc--CCCeEEEeeCCCHHHHHHhcCCCC
Confidence            6899999999999999999999987       899999872   11111 1000  000000011111112234567899


Q ss_pred             EEEEeCCCCCCCCCC---HHHHHHHHHHHHHHHHHH
Q psy9582          86 IAILIGSFPRKSNME---RSELLAINSSIFIEQGKA  118 (329)
Q Consensus        86 iVi~~~g~~~~~g~~---~~~~~~~n~~~~~~i~~~  118 (329)
                      ++|+.+|.......+   ....+..|+.....+++.
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  117 (245)
T PRK12367         82 VLILNHGINPGGRQDPENINKALEINALSSWRLLEL  117 (245)
T ss_pred             EEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence            999998864322222   334556677654444443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.00  E-value=0.002  Score=57.84  Aligned_cols=103  Identities=15%  Similarity=0.174  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEe-ecCccccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSV-HENPITAF-   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~-~~~~~~al-   81 (329)
                      ++||.|+||+|++|+.++..|+..+.       +|+++.++    .+++.....+  ...... ..++.- ..++.+++ 
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~~~   83 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRD----VDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEAIG   83 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecC----HHHHHHhccc--CCceEEEEeeCCCCHHHHHHHhh
Confidence            47899999999999999999999886       88888776    3322211100  000000 011110 01234556 


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      .++|+||+++|.....+.  ......|......+++.+.+.
T Consensus        84 ~~~d~vi~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~  122 (251)
T PLN00141         84 DDSDAVICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKA  122 (251)
T ss_pred             cCCCEEEECCCCCcCCCC--CCceeeehHHHHHHHHHHHHc
Confidence            689999998775322111  111223444556677777664

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=97.00  E-value=0.0026  Score=58.74  Aligned_cols=62  Identities=13%  Similarity=0.219  Sum_probs=45.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||++||. |.+|++++..|++.|+       +|.++|++    .. .+    ++....      .....+..++.++||
T Consensus         1 m~Ig~IGl-G~MG~~ma~~L~~~G~-------~v~v~~~~----~~-~~----~~~~~g------~~~~~s~~~~~~~ad   57 (292)
T PRK15059          1 MKLGFIGL-GIMGTPMAINLARAGH-------QLHVTTIG----PV-AD----ELLSLG------AVSVETARQVTEASD   57 (292)
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCC-------eEEEEeCC----Hh-HH----HHHHcC------CeecCCHHHHHhcCC
Confidence            37999998 9999999999999987       89999987    32 22    122111      222344567789999


Q ss_pred             EEEEe
Q psy9582          86 IAILI   90 (329)
Q Consensus        86 iVi~~   90 (329)
                      +||++
T Consensus        58 vVi~~   62 (292)
T PRK15059         58 IIFIM   62 (292)
T ss_pred             EEEEe
Confidence            99997

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0068  Score=54.09  Aligned_cols=34  Identities=21%  Similarity=0.113  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       .|+++|++
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~   41 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRK   41 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            46899999999999999999999886       89999998

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.98  E-value=0.00048  Score=61.73  Aligned_cols=121  Identities=14%  Similarity=0.116  Sum_probs=73.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC----CCCCCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      .||.+.|| |..|..++.+|+..    |+-. ++ --+++|+|.+-  ....+.+......+.+..    .......++.
T Consensus        26 ~riv~~GA-GsAg~gia~ll~~~~~~~G~~~-~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~----~~~~~~~~L~   99 (255)
T PF03949_consen   26 QRIVFFGA-GSAGIGIARLLVAAMVREGLSE-EEARKRIWLVDSKGLLTDDREDLNPHKKPFARKT----NPEKDWGSLL   99 (255)
T ss_dssp             -EEEEEB--SHHHHHHHHHHHHHHHCTTS-H-HHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSS----STTT--SSHH
T ss_pred             cEEEEeCC-ChhHHHHHHHHHHHHHHhcCCH-HHHhccEEEEeccceEeccCccCChhhhhhhccC----cccccccCHH
Confidence            69999999 99999999988876    7630 00 01799999871  001111222222222211    1111115788


Q ss_pred             cccCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582          79 TAFKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA  147 (329)
Q Consensus        79 ~al~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~  147 (329)
                      ++++++  |++|=+.+.+.              -..+++.+.|.+++ ++.+|.-.|||..   +..+-+++.+
T Consensus       100 eav~~~kPtvLIG~S~~~g--------------~ft~evv~~Ma~~~-erPIIF~LSNPt~~aE~~peda~~~t  158 (255)
T PF03949_consen  100 EAVKGAKPTVLIGLSGQGG--------------AFTEEVVRAMAKHN-ERPIIFPLSNPTPKAECTPEDAYEWT  158 (255)
T ss_dssp             HHHHCH--SEEEECSSSTT--------------SS-HHHHHHCHHHS-SSEEEEE-SSSCGGSSS-HHHHHHTT
T ss_pred             HHHHhcCCCEEEEecCCCC--------------cCCHHHHHHHhccC-CCCEEEECCCCCCcccCCHHHHHhhC
Confidence            999999  99887655433              35677888899997 8999999999975   4445555555

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.98  E-value=0.002  Score=55.64  Aligned_cols=74  Identities=14%  Similarity=0.163  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-----cCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-----ENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-----~~~~~   79 (329)
                      .+++.|+||+|.+|..++..|...+.       +|++++++    .++++....++.+.. ..  .+...     .+..+
T Consensus        28 ~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~----~~~~~~l~~~l~~~~-~~--~~~~~~~~~~~~~~~   93 (194)
T cd01078          28 GKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRD----LERAQKAADSLRARF-GE--GVGAVETSDDAARAA   93 (194)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHhhc-CC--cEEEeeCCCHHHHHH
Confidence            47999999889999999999998775       89999988    555554443343211 11  11111     22346


Q ss_pred             ccCCccEEEEeCC
Q psy9582          80 AFKDANIAILIGS   92 (329)
Q Consensus        80 al~~aDiVi~~~g   92 (329)
                      +++++|+||.+..
T Consensus        94 ~~~~~diVi~at~  106 (194)
T cd01078          94 AIKGADVVFAAGA  106 (194)
T ss_pred             HHhcCCEEEECCC
Confidence            7899999888643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0033  Score=55.92  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|.+|++++..|++.|.       +|.+++++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~   38 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRD   38 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCC
Confidence            456899999999999999999999886       89999988

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.98  E-value=0.0028  Score=55.92  Aligned_cols=34  Identities=12%  Similarity=0.284  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+|.|+||+|++|+.++..|++.|.       +|++++++
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~   38 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRN   38 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            46899999999999999999999887       89999998

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.98  E-value=0.0044  Score=55.51  Aligned_cols=116  Identities=16%  Similarity=0.109  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCc----
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENP----   77 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~----   77 (329)
                      -+.+++.|+||+|.+|.+++..|++.|.       +|++.+.+.   ++.++    ++.+..... ..++.-..+.    
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~---~~~~~----~l~~~~~~~~~~Dl~~~~~~~~~~   70 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSA---ENEAK----ELREKGVFTIKCDVGNRDQVKKSK   70 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCc---HHHHH----HHHhCCCeEEEecCCCHHHHHHHH
Confidence            3457899999999999999999999887       788877651   11111    111110000 0011000111    


Q ss_pred             ---ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|+||+++|.... +  ..+   ....+..|+..    .+.+.+.+.+.  ..+.||+++-
T Consensus        71 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~g~iv~isS  138 (255)
T PRK06463         71 EVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS--KNGAIVNIAS  138 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcC
Confidence               1223467999999886431 1  122   22344556554    56666666643  3456666654

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=96.97  E-value=0.0026  Score=59.62  Aligned_cols=74  Identities=15%  Similarity=0.178  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+++|||+ |.+|...+..+....-+.     +|.++|++    .++++..+.++++.    ...+....+..+++++
T Consensus       127 ~~~~lgiiG~-G~qA~~~l~al~~~~~~~-----~v~V~~r~----~~~~~~~~~~~~~~----g~~v~~~~~~~eav~~  192 (325)
T TIGR02371       127 DSSVLGIIGA-GRQAWTQLEALSRVFDLE-----EVSVYCRT----PSTREKFALRASDY----EVPVRAATDPREAVEG  192 (325)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEECCC----HHHHHHHHHHHHhh----CCcEEEeCCHHHHhcc
Confidence            3579999998 999998777665533333     99999999    66666555555432    1235666788899999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+.+.
T Consensus       193 aDiVitaT  200 (325)
T TIGR02371       193 CDILVTTT  200 (325)
T ss_pred             CCEEEEec
Confidence            99999863

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0075  Score=54.08  Aligned_cols=161  Identities=14%  Similarity=0.079  Sum_probs=79.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~--   79 (329)
                      .+++.|+||+|.+|.+++..|+..|.       ++++++.+.....+.++....++.......   ..++.-..+..+  
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence            47899999999999999999998887       767776542111222222222222111000   001111111111  


Q ss_pred             -----ccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhHHHHHHHHC
Q psy9582          80 -----AFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTNTYITMKSA  147 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~~~~~~~~~  147 (329)
                           .+...|++|+.+|.... +  ..+   ....+..|+.....+.+.+.+...+.+.++++ +--...       ..
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------~~  153 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------FT  153 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-------cC
Confidence                 13467999999886321 1  112   33445567665555555554433233333333 222111       01


Q ss_pred             CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         148 PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       148 ~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ++.   ...+.+-.....+...+++.++  +..|+..
T Consensus       154 ~~~---~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~  185 (257)
T PRK12744        154 PFY---SAYAGSKAPVEHFTRAASKEFG--ARGISVT  185 (257)
T ss_pred             CCc---ccchhhHHHHHHHHHHHHHHhC--cCceEEE
Confidence            111   1223333333456677777776  4456544

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0037  Score=56.00  Aligned_cols=34  Identities=21%  Similarity=0.188  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+|.|+||+|++|.+++..|++.|.       +|+++|++
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~   40 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDID   40 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            46899999999999999999999887       89999998

>PRK12742 oxidoreductase; Provisional

Probab=96.96  E-value=0.0051  Score=54.25  Aligned_cols=34  Identities=18%  Similarity=0.266  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|..++..|+..|.       ++++.+.+
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~   39 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAG   39 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCC
Confidence            46899999999999999999999887       78887654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.96  E-value=0.0045  Score=55.64  Aligned_cols=78  Identities=9%  Similarity=0.155  Sum_probs=48.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCc------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENP------   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~------   77 (329)
                      |++.|+||+|.+|.+++..|++.|.       +|.+.+++    .+.++....++.+....  +..+++-..+.      
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~   69 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRN----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKE   69 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHH
Confidence            4799999999999999999999987       89999998    44444333334321100  00011100111      


Q ss_pred             -ccccCCccEEEEeCCCC
Q psy9582          78 -ITAFKDANIAILIGSFP   94 (329)
Q Consensus        78 -~~al~~aDiVi~~~g~~   94 (329)
                       .+.+..-|++|..+|..
T Consensus        70 ~~~~~g~id~li~naG~~   87 (259)
T PRK08340         70 AWELLGGIDALVWNAGNV   87 (259)
T ss_pred             HHHhcCCCCEEEECCCCC
Confidence             12235689999998863

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.96  E-value=0.0036  Score=56.13  Aligned_cols=34  Identities=29%  Similarity=0.368  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~   41 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRS   41 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCc
Confidence            36899999999999999999999987       89999987

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0046  Score=55.53  Aligned_cols=118  Identities=19%  Similarity=0.175  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCccc---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPIT---   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~~---   79 (329)
                      ++|.|+||+|++|..++..|+..|.       +|+++|++    .+..+....++........ .....+  .+..+   
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   70 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARN----ETRLASLAQELADHGGEALVVPTDVSDAEACERLIE   70 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            4799999999999999999998886       89999988    3333333333332110000 000010  01111   


Q ss_pred             ----ccCCccEEEEeCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582          80 ----AFKDANIAILIGSFPRKSN---M-ER---SELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN  134 (329)
Q Consensus        80 ----al~~aDiVi~~~g~~~~~g---~-~~---~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN  134 (329)
                          .+.+.|+||+++|......   . +.   ...+..|+.....+.+.+.++. +..+.+++++-
T Consensus        71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS  137 (263)
T PRK06181         71 AAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSS  137 (263)
T ss_pred             HHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEec
Confidence                1236799999987643211   1 21   2335666666666555554321 12345555554

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0033  Score=57.80  Aligned_cols=119  Identities=13%  Similarity=0.112  Sum_probs=68.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCccc---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPIT---   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~---   79 (329)
                      +++.|+||+|.+|++++..|++.|.       +|++++++.   ...++.....++...... .....++  .+..+   
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  116 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDE---HEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVE  116 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---chHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            6899999999999999999999887       899999872   111222222222111000 0001111  11111   


Q ss_pred             ----ccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          80 ----AFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 ----al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                          .+...|+||+.+|....  +  ..+   ....+..|+.....+.+.+.++-.+.+.+|++|.
T Consensus       117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS  182 (290)
T PRK06701        117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS  182 (290)
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence                12357999998876321  1  122   2345677877777777777664324456666654

>PRK08264 short chain dehydrogenase; Validated

Probab=96.94  E-value=0.0036  Score=55.29  Aligned_cols=122  Identities=16%  Similarity=0.153  Sum_probs=66.0

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---   76 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---   76 (329)
                      ||+ +.++|.|+||+|.+|++++..|++.|.-      +|.+++++    .+++..    ..........++.-..+   
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~------~V~~~~r~----~~~~~~----~~~~~~~~~~D~~~~~~~~~   66 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAA------KVYAAARD----PESVTD----LGPRVVPLQLDVTDPASVAA   66 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcc------cEEEEecC----hhhhhh----cCCceEEEEecCCCHHHHHH
Confidence            564 4578999999999999999999988752      68999987    332221    00000000001100111   


Q ss_pred             cccccCCccEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCch
Q psy9582          77 PITAFKDANIAILIGSFPRKS----NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNPV  136 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~----g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP~  136 (329)
                      ..+.+...|+||+++|.+...    ..+   ....+..|......+.+.+.+..  ...+.++++|...
T Consensus        67 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~  135 (238)
T PRK08264         67 AAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVL  135 (238)
T ss_pred             HHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChh
Confidence            112234579999998873211    112   22334556665555555543321  1345666666543

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.94  E-value=0.0029  Score=58.20  Aligned_cols=60  Identities=13%  Similarity=0.206  Sum_probs=44.7

Q ss_pred             EEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEE
Q psy9582          10 ITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAIL   89 (329)
Q Consensus        10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~   89 (329)
                      +||. |.+|.+++..|+..|.       +|.+||++    .++.+.    +...      ....+.+..++++++|+||+
T Consensus         1 ~IGl-G~mG~~mA~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~------g~~~~~s~~~~~~~advVil   58 (288)
T TIGR01692         1 FIGL-GNMGGPMAANLLKAGH-------PVRVFDLF----PDAVEE----AVAA------GAQAAASPAEAAEGADRVIT   58 (288)
T ss_pred             CCcc-cHhHHHHHHHHHhCCC-------eEEEEeCC----HHHHHH----HHHc------CCeecCCHHHHHhcCCEEEE
Confidence            5798 9999999999999887       89999998    444332    2221      12344566788999999999


Q ss_pred             eC
Q psy9582          90 IG   91 (329)
Q Consensus        90 ~~   91 (329)
                      +.
T Consensus        59 ~v   60 (288)
T TIGR01692        59 ML   60 (288)
T ss_pred             eC
Confidence            83

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.93  E-value=0.0057  Score=54.43  Aligned_cols=33  Identities=24%  Similarity=0.294  Sum_probs=30.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|+.++..|+..|.       +|++++++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~   34 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLG   34 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            4799999999999999999999887       89999998

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0023  Score=56.67  Aligned_cols=117  Identities=16%  Similarity=0.152  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc---c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA---F   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a---l   81 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|++++++    .++++....... .. ....+++-..+..+.   .
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~-~~-~~~~D~~~~~~v~~~~~~~   75 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARN----AAALDRLAGETG-CE-PLRLDVGDDAAIRAALAAA   75 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhC-Ce-EEEecCCCHHHHHHHHHHh
Confidence            46899999999999999999999887       89999998    333332211111 00 000011101111122   2


Q ss_pred             CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcC---CCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVAS---RDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~---p~a~viv~tN  134 (329)
                      ...|+||+.+|.....   ..+   ....+..|+.....+.+.+.+...   ..+.|+++|-
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  137 (245)
T PRK07060         76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS  137 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence            3579999988764311   112   223445666666556555544321   1246666653

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.02  Score=51.36  Aligned_cols=118  Identities=12%  Similarity=0.041  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-C-ccceEeec--C---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-L-LVDVSVHE--N---   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~-~~~i~~~~--~---   76 (329)
                      +.+++.|+|++|.+|.+++..|+..|.       +|.+.+++    .++++....++...... . .....++.  +   
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   74 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARD----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQ   74 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHH
Confidence            357899999999999999999999887       89999998    44444333333321100 0 00111110  1   


Q ss_pred             cccccCCccEEEEeCCCCC-CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 PITAFKDANIAILIGSFPR-KS--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~-~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..+.+...|++|+++|... .+  ..+   ....+..|+..    .+.+.+.+.+.  ..+.+++++.
T Consensus        75 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~iss  140 (259)
T PRK06125         75 LAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR--GSGVIVNVIG  140 (259)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEecC
Confidence            1123457899999888642 11  112   23344555553    44444555543  2356666653

>PRK08291 ectoine utilization protein EutC; Validated

Probab=96.92  E-value=0.0037  Score=58.73  Aligned_cols=73  Identities=12%  Similarity=0.166  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..+|+|+|+ |..|...+..+.. .+ +.     +|.+++++    .++++..+.++++.. +  ..+....+..+++.+
T Consensus       132 ~~~v~IiGa-G~~a~~~~~al~~~~~-~~-----~V~v~~R~----~~~a~~l~~~~~~~~-g--~~v~~~~d~~~al~~  197 (330)
T PRK08291        132 ASRAAVIGA-GEQARLQLEALTLVRP-IR-----EVRVWARD----AAKAEAYAADLRAEL-G--IPVTVARDVHEAVAG  197 (330)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCC-CC-----EEEEEcCC----HHHHHHHHHHHhhcc-C--ceEEEeCCHHHHHcc
Confidence            479999998 9999988887775 34 33     89999999    666666655554321 1  234556777889999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+.+.
T Consensus       198 aDiVi~aT  205 (330)
T PRK08291        198 ADIIVTTT  205 (330)
T ss_pred             CCEEEEee
Confidence            99998874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.91  E-value=0.007  Score=53.55  Aligned_cols=33  Identities=24%  Similarity=0.277  Sum_probs=29.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~   45 (329)
                      ++|.|+||+|.+|..++..|++.|.       ++++. +++
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~   39 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDIN   39 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCC
Confidence            5899999999999999999998886       78887 887

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.90  E-value=0.0043  Score=55.86  Aligned_cols=38  Identities=18%  Similarity=0.204  Sum_probs=32.7

Q ss_pred             CCCC--CCEEEEEcC--CCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKK--PVRISITGA--AGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~--~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||++  .+.+.|+||  ++.+|..++..|+..|.       .|++.|++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~   42 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFG   42 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCc
Confidence            6753  468999998  78999999999999887       89999876

>PRK09242 tropinone reductase; Provisional

Probab=96.90  E-value=0.015  Score=52.05  Aligned_cols=117  Identities=15%  Similarity=0.093  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEeec----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVHE----   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~~----   75 (329)
                      .+++.|+||+|.+|..++..|++.|.       +|++.+++    .+.++....++....... .    .++.-..    
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~   77 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGA-------DVLIVARD----ADALAQARDELAEEFPEREVHGLAADVSDDEDRRA   77 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence            46899999999999999999999887       89999998    444444444443221000 0    0110000    


Q ss_pred             ---CcccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          76 ---NPITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ---~~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                         ...+.+...|+||+++|.... +  ..+   ....+..|+.-...+    .+.+++.  +.+.++++|-
T Consensus        78 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~~sS  147 (257)
T PRK09242         78 ILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH--ASSAIVNIGS  147 (257)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCceEEEECc
Confidence               112234567999999886321 1  112   223345565544444    4444443  3345555543

>TIGR02415 23BDH acetoin reductases

Probab=96.88  E-value=0.0076  Score=53.73  Aligned_cols=32  Identities=25%  Similarity=0.346  Sum_probs=29.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++.|+||+|.+|.+++..|++.|.       +|++++.+
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~   33 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-------AVAVADLN   33 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            689999999999999999999887       89999987

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.88  E-value=0.016  Score=51.37  Aligned_cols=38  Identities=29%  Similarity=0.281  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |+.+..++.|+|++|.+|..++..|++.|.       +|+++|++
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~   38 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLN   38 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            444567899999999999999999999886       89999998

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0061  Score=54.55  Aligned_cols=33  Identities=27%  Similarity=0.291  Sum_probs=30.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|..++..|++.|.       +|.+++++
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~   35 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDID   35 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            3799999999999999999998886       89999988

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.87  E-value=0.0029  Score=59.50  Aligned_cols=62  Identities=18%  Similarity=0.191  Sum_probs=44.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .++|+|||. |.+|+.+|..|+. .|.       +|+.+|.+    ....      ...       .+....++.+++++
T Consensus       146 g~~VgIIG~-G~IG~~vA~~L~~~~g~-------~V~~~d~~----~~~~------~~~-------~~~~~~~l~ell~~  200 (332)
T PRK08605        146 DLKVAVIGT-GRIGLAVAKIFAKGYGS-------DVVAYDPF----PNAK------AAT-------YVDYKDTIEEAVEG  200 (332)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC-------EEEEECCC----ccHh------HHh-------hccccCCHHHHHHh
Confidence            479999999 9999999999953 344       89999987    2211      011       01223467788999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+++.
T Consensus       201 aDvIvl~l  208 (332)
T PRK08605        201 ADIVTLHM  208 (332)
T ss_pred             CCEEEEeC
Confidence            99999974

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.017  Score=51.86  Aligned_cols=118  Identities=14%  Similarity=0.226  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccc-hhhhHhhhhhccc-CC-ccceEee--cC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKA-IKGVIMEIEDCIF-PL-LVDVSVH--EN   76 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~-~~~~~~dl~~~~~-~~-~~~i~~~--~~   76 (329)
                      .++++|.|+||+|++|.+++..|++.+ .       .|.+++++    .+. ++....++..... .. .....++  .+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~-------~V~~~~r~----~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~   74 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPA-------RVVLAALP----DDPRRDAAVAQMKAAGASSVEVIDFDALDTDS   74 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCC-------eEEEEeCC----cchhHHHHHHHHHhcCCCceEEEEecCCChHH
Confidence            456789999999999999999999874 5       79999998    333 4433334432110 00 0011111  11


Q ss_pred             c----cccc--CCccEEEEeCCCCCCCCC---CH---HHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 P----ITAF--KDANIAILIGSFPRKSNM---ER---SELLAINSSI----FIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~----~~al--~~aDiVi~~~g~~~~~g~---~~---~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .    .+..  .+.|++|..+|.......   +.   .+.+..|+..    .+.+.+.+.+..  .+.|+++|
T Consensus        75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~is  145 (253)
T PRK07904         75 HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMS  145 (253)
T ss_pred             HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEe
Confidence            1    1111  378999988776432111   11   1235666543    345666666642  34555554

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.86  E-value=0.003  Score=56.67  Aligned_cols=34  Identities=12%  Similarity=0.120  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|..++..|++.|.       +|.+++++
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~   48 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHG   48 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            47899999999999999999999887       89999887

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.016  Score=51.90  Aligned_cols=34  Identities=18%  Similarity=0.140  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~   45 (329)
                      .++|.|+||+|.+|..++..|+..|.       + |.+++++
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~   40 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRN   40 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCC
Confidence            47899999999999999999998886       5 9999987

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.85  E-value=0.004  Score=58.58  Aligned_cols=92  Identities=12%  Similarity=0.129  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..||+.    .....    +. ..  .    +.. .++.+.+++|
T Consensus       150 gktvgIiG~-G~IG~~vA~~l~~~G~-------~V~~~d~~----~~~~~----~~-~~--~----~~~-~~l~ell~~a  205 (333)
T PRK13243        150 GKTIGIIGF-GRIGQAVARRAKGFGM-------RILYYSRT----RKPEA----EK-EL--G----AEY-RPLEELLRES  205 (333)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCC----CChhh----HH-Hc--C----CEe-cCHHHHHhhC
Confidence            479999999 9999999999998887       89999987    22111    11 11  0    111 3567889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.....           .+..++-  .+.+... +|++++|+++-
T Consensus       206 DiV~l~lP~t~-----------~T~~~i~--~~~~~~m-k~ga~lIN~aR  241 (333)
T PRK13243        206 DFVSLHVPLTK-----------ETYHMIN--EERLKLM-KPTAILVNTAR  241 (333)
T ss_pred             CEEEEeCCCCh-----------HHhhccC--HHHHhcC-CCCeEEEECcC
Confidence            99999743211           0111111  1233443 58899999973

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0077  Score=55.45  Aligned_cols=118  Identities=18%  Similarity=0.217  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeec--C-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHE--N-----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~--~-----   76 (329)
                      .+++.|+||+|.+|..++..|+..|.       +|.+.+++    .+.++....++.... ... ....++.  +     
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~l~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~   76 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGA-------KLALVDLE----EAELAALAAELGGDD-RVLTVVADVTDLAAMQAAA   76 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcCCC-cEEEEEecCCCHHHHHHHH
Confidence            36899999999999999999999987       89999998    444544333332110 000 0011111  1     


Q ss_pred             --cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582          77 --PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN  134 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN  134 (329)
                        ..+.+...|+||+.+|.... +  ..+   ....+..|+.....+++.+.++. ...+.|++++.
T Consensus        77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence              11223567999999886431 1  112   22345566665555554443321 12345666653

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.04  Score=48.91  Aligned_cols=103  Identities=15%  Similarity=0.121  Sum_probs=58.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c--cceEeec--C----
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L--VDVSVHE--N----   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~--~~i~~~~--~----   76 (329)
                      +++.|+||+|++|.+++..|++.|.       +|.+.+++    .+++.....++....... .  ....++.  +    
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGR-------DLALCARR----TDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEV   71 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHH
Confidence            4799999999999999999999886       89999998    444443333333211000 0  0111111  1    


Q ss_pred             ---cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH
Q psy9582          77 ---PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKAL  119 (329)
Q Consensus        77 ---~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i  119 (329)
                         ..+.+...|+||+.+|......   .+   ....+..|+.....+.+.+
T Consensus        72 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  123 (248)
T PRK08251         72 FAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAA  123 (248)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHH
Confidence               1223457899999988643221   11   1234456665544444443

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0048  Score=55.12  Aligned_cols=35  Identities=29%  Similarity=0.241  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|.+|.+++..|++.|.       +|.+.+++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~   48 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRS   48 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            347899999999999999999999887       89999987

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=96.83  E-value=0.0088  Score=55.76  Aligned_cols=65  Identities=14%  Similarity=0.118  Sum_probs=44.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |++|.+++..|...|.       ++.+++...   .+....    +...      .+... +..+++++|
T Consensus         3 ~kkIgiIG~-G~mG~AiA~~L~~sG~-------~Viv~~~~~---~~~~~~----a~~~------Gv~~~-s~~ea~~~A   60 (314)
T TIGR00465         3 GKTVAIIGY-GSQGHAQALNLRDSGL-------NVIVGLRKG---GASWKK----ATED------GFKVG-TVEEAIPQA   60 (314)
T ss_pred             cCEEEEEeE-cHHHHHHHHHHHHCCC-------eEEEEECcC---hhhHHH----HHHC------CCEEC-CHHHHHhcC
Confidence            478999998 9999999999999886       676665541   122211    1111      12222 356788999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+++.
T Consensus        61 DiVvLaV   67 (314)
T TIGR00465        61 DLIMNLL   67 (314)
T ss_pred             CEEEEeC
Confidence            9999983

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.0062  Score=54.54  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.+.|+||+|.+|.+++..|++.|.       +|++.|++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~   41 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLR   41 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            347899999999999999999999987       89999987

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=96.81  E-value=0.0015  Score=58.58  Aligned_cols=122  Identities=11%  Similarity=0.094  Sum_probs=76.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCC---CCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLL---GKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~---~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      .||.+.|| |..|..++.+|...+.-   +.++ --+++++|..-  ......+......+.+    +...-....++.+
T Consensus        26 ~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~----~~~~~~~~~~L~e  100 (254)
T cd00762          26 HKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLAR----FANPERESGDLED  100 (254)
T ss_pred             cEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHH----HcCcccccCCHHH
Confidence            69999999 99999999888765431   1111 12799999861  0001111111111111    1111112357889


Q ss_pred             ccC--CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582          80 AFK--DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA  147 (329)
Q Consensus        80 al~--~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~  147 (329)
                      +++  ++|++|=+.+.+.              -+.+++.+.|.+++ ++.+|+-.|||..   +...-+++.+
T Consensus       101 av~~~kptvlIG~S~~~g--------------~ft~evv~~Ma~~~-~~PIIFaLSNPt~~aE~tpe~a~~~t  158 (254)
T cd00762         101 AVEAAKPDFLIGVSRVGG--------------AFTPEVIRAXAEIN-ERPVIFALSNPTSKAECTAEEAYTAT  158 (254)
T ss_pred             HHHhhCCCEEEEeCCCCC--------------CCCHHHHHHHhhcC-CCCEEEECCCcCCccccCHHHHHhhc
Confidence            999  9999886654432              25567788888887 8899999999974   5666666665

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.80  E-value=0.0053  Score=52.37  Aligned_cols=93  Identities=17%  Similarity=0.170  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.+|+.+|..+..-|.       +|..+|+.    .....    ...+.      .+. ..++.+.++.|
T Consensus        36 g~tvgIiG~-G~IG~~vA~~l~~fG~-------~V~~~d~~----~~~~~----~~~~~------~~~-~~~l~ell~~a   92 (178)
T PF02826_consen   36 GKTVGIIGY-GRIGRAVARRLKAFGM-------RVIGYDRS----PKPEE----GADEF------GVE-YVSLDELLAQA   92 (178)
T ss_dssp             TSEEEEEST-SHHHHHHHHHHHHTT--------EEEEEESS----CHHHH----HHHHT------TEE-ESSHHHHHHH-
T ss_pred             CCEEEEEEE-cCCcCeEeeeeecCCc-------eeEEeccc----CChhh----hcccc------cce-eeehhhhcchh
Confidence            479999999 9999999999998887       99999998    22111    11111      122 23677889999


Q ss_pred             cEEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGS-FPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g-~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|+++.. .+...++=       |       .+.++.. ++++++||++--
T Consensus        93 Div~~~~plt~~T~~li-------~-------~~~l~~m-k~ga~lvN~aRG  129 (178)
T PF02826_consen   93 DIVSLHLPLTPETRGLI-------N-------AEFLAKM-KPGAVLVNVARG  129 (178)
T ss_dssp             SEEEE-SSSSTTTTTSB-------S-------HHHHHTS-TTTEEEEESSSG
T ss_pred             hhhhhhhccccccceee-------e-------eeeeecc-ccceEEEeccch
Confidence            99999743 23222210       1       1334443 588999999854

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.79  E-value=0.0084  Score=53.66  Aligned_cols=119  Identities=14%  Similarity=0.130  Sum_probs=66.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--C-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--N-----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~-----   76 (329)
                      .++|.|+||+|.+|.+++..|+..|.       ++++.+++    .+.++....++.+..... .....++.  +     
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   79 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            47999999999999999999999887       89999987    444433333333211000 00111111  1     


Q ss_pred             --cccccCCccEEEEeCCCCCC--CCCCHH---HHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          77 --PITAFKDANIAILIGSFPRK--SNMERS---ELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~--~g~~~~---~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                        ..+.+...|++|+++|....  ...+..   ..+..|+.....+.+.+..+.  ...+.+|+++-
T Consensus        80 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  146 (255)
T PRK06113         80 DFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS  146 (255)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence              11223457999998875321  122222   235667666555555544321  12345555543

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=96.79  E-value=0.013  Score=60.98  Aligned_cols=94  Identities=17%  Similarity=0.183  Sum_probs=61.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||+|||+ |.+|.+++..|...|...     +|..+|++    .++++. +.+.     ...  ....++..++++++|
T Consensus         4 ~~I~IIG~-G~mG~ala~~l~~~G~~~-----~V~~~d~~----~~~~~~-a~~~-----g~~--~~~~~~~~~~~~~aD   65 (735)
T PRK14806          4 GRVVVIGL-GLIGGSFAKALRERGLAR-----EVVAVDRR----AKSLEL-AVSL-----GVI--DRGEEDLAEAVSGAD   65 (735)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCC-----EEEEEECC----hhHHHH-HHHC-----CCC--CcccCCHHHHhcCCC
Confidence            68999998 999999999999887422     79999998    443331 1111     110  112345567789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++...                ..+.++.+.+.++.+++.+|+.++
T Consensus        66 vVilavp~----------------~~~~~vl~~l~~~~~~~~ii~d~~   97 (735)
T PRK14806         66 VIVLAVPV----------------LAMEKVLADLKPLLSEHAIVTDVG   97 (735)
T ss_pred             EEEECCCH----------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence            99997321                235566666666655666665554

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.032  Score=49.34  Aligned_cols=46  Identities=30%  Similarity=0.255  Sum_probs=36.9

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI   57 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~   57 (329)
                      |..+.+.+.|+||++.+|.+++..|++.|.       +|.+.+++    .++++...
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~l~~~~   46 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQD----QSALKDTY   46 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHH
Confidence            333457899999999999999999999987       89999998    44454333

>PRK07985 oxidoreductase; Provisional

Probab=96.78  E-value=0.011  Score=54.31  Aligned_cols=120  Identities=13%  Similarity=0.150  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec---------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE---------   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~---------   75 (329)
                      +++.|+||+|.+|.+++..|++.|.       +|.+.+++..  .+.++.....+....... .....++.         
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  120 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVE--EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVH  120 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcc--hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHH
Confidence            6899999999999999999999987       8988876521  122221111111110000 00001110         


Q ss_pred             CcccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          76 NPITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ...+.+...|++|+.+|...  .+  ..+   ....+..|+.....+.+.+.++...++.||++|-
T Consensus       121 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS  186 (294)
T PRK07985        121 EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS  186 (294)
T ss_pred             HHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence            11123456799999887532  11  122   2344567776665666555544323456777664

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.78  E-value=0.0083  Score=53.29  Aligned_cols=120  Identities=17%  Similarity=0.204  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a-   80 (329)
                      .+++.|+||+|.+|++++..|++.|.       ++.+.+.+.   .+.++....++.+.....   ..++.-.....++ 
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   75 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS---KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLV   75 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc---HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            47899999999999999999999886       777655431   223333333333211000   0011111111112 


Q ss_pred             ------cCCccEEEEeCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          81 ------FKDANIAILIGSFPRKSN------MERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~g------~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                            +...|+||+++|......      ....+.+..|+.....+.+.+.++.  ...+.+++++-
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         76 EEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence                  234799999988643211      1233455667666666555554431  12345666554

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.0064  Score=54.61  Aligned_cols=34  Identities=35%  Similarity=0.245  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|+.++..|+..|.       +|++++++
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~   39 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGA-------NLILLDIS   39 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCC
Confidence            47899999999999999999999887       89999987

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.77  E-value=0.012  Score=52.30  Aligned_cols=34  Identities=24%  Similarity=0.265  Sum_probs=28.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~   45 (329)
                      .+++.|+||+|++|..++..|++.|.       +|++. +++
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~-------~v~~~~~r~   38 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGY-------DIAVNYARS   38 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC
Confidence            36899999999999999999999886       67664 555

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.77  E-value=0.0053  Score=56.91  Aligned_cols=75  Identities=15%  Similarity=0.116  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+++|+|+ |..|...+..+..-.-+.     +|++||++    .++.+..+.++.+.   +...+....+..+++.+
T Consensus       116 da~~l~iiGa-G~QA~~~~~a~~~v~~i~-----~v~v~~r~----~~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~  182 (301)
T PRK06407        116 NVENFTIIGS-GFQAETQLEGMASVYNPK-----RIRVYSRN----FDHARAFAERFSKE---FGVDIRPVDNAEAALRD  182 (301)
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHhcCCCC-----EEEEECCC----HHHHHHHHHHHHHh---cCCcEEEeCCHHHHHhc
Confidence            3578999998 999988777777643334     99999999    66677666666542   11246666788999999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+.+.
T Consensus       183 aDIV~taT  190 (301)
T PRK06407        183 ADTITSIT  190 (301)
T ss_pred             CCEEEEec
Confidence            99999753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.77  E-value=0.0044  Score=54.74  Aligned_cols=34  Identities=26%  Similarity=0.236  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|+.++..|++.|.       ++.+...+
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~-------~v~~~~~~   39 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGA-------DVVVHYRS   39 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC
Confidence            36899999999999999999999887       67665554

>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional

Probab=96.76  E-value=0.012  Score=55.52  Aligned_cols=101  Identities=20%  Similarity=0.236  Sum_probs=62.9

Q ss_pred             CEEEEEcCCCc--------------------hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-hhhcc
Q psy9582           6 VRISITGAAGQ--------------------IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-IEDCI   64 (329)
Q Consensus         6 ~kI~IiGa~G~--------------------vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-l~~~~   64 (329)
                      +||+|-|| |+                    -|..+|..|+..|.       +|+++|++    .+.++....+ +..  
T Consensus         1 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gG~~MA~~La~aG~-------~V~v~Dr~----~~~l~~~~~~~l~~--   66 (342)
T PRK12557          1 MKVSVYGA-GNQKLYLEQLNLPEKFGGEPPYGGSRMAIEFAEAGH-------DVVLAEPN----RSILSEELWKKVED--   66 (342)
T ss_pred             CeeEEEcC-cchhHHHHHhCCHHhcCCCCCcCHHHHHHHHHhCCC-------eEEEEECC----HHHhhHHHHHHHHH--
Confidence            57888888 75                    37789999998887       89999998    3322211111 211  


Q ss_pred             cCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhH
Q psy9582          65 FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTN  139 (329)
Q Consensus        65 ~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~  139 (329)
                          ..++.+++..+++++||+||++.  |.  +           ..++++++.+.....++.+|+..+ -+...+
T Consensus        67 ----~Gi~~asd~~eaa~~ADvVIlaV--P~--~-----------~~v~~Vl~~L~~~L~~g~IVId~ST~~~~~~  123 (342)
T PRK12557         67 ----AGVKVVSDDAEAAKHGEIHILFT--PF--G-----------KKTVEIAKNILPHLPENAVICNTCTVSPVVL  123 (342)
T ss_pred             ----CCCEEeCCHHHHHhCCCEEEEEC--CC--c-----------HHHHHHHHHHHhhCCCCCEEEEecCCCHHHH
Confidence                12455567778899999999982  22  1           134445555665554666766665 344443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.74  E-value=0.0043  Score=55.18  Aligned_cols=34  Identities=21%  Similarity=0.126  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|.+++..|++.|.       +|++++++
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~   38 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRS   38 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCc
Confidence            47899999999999999999999987       89999987

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06141 ornithine cyclodeaminase; Validated

Probab=96.74  E-value=0.0058  Score=57.02  Aligned_cols=73  Identities=14%  Similarity=0.201  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ...+|+|||+ |.+|...+..+.. .+. .     +|+++|++    .++.+..+.++.+.  .  ..+....+..++++
T Consensus       124 ~~~~v~iiG~-G~~a~~~~~al~~~~~~-~-----~V~V~~Rs----~~~a~~~a~~~~~~--g--~~~~~~~~~~~av~  188 (314)
T PRK06141        124 DASRLLVVGT-GRLASLLALAHASVRPI-K-----QVRVWGRD----PAKAEALAAELRAQ--G--FDAEVVTDLEAAVR  188 (314)
T ss_pred             CCceEEEECC-cHHHHHHHHHHHhcCCC-C-----EEEEEcCC----HHHHHHHHHHHHhc--C--CceEEeCCHHHHHh
Confidence            3579999998 9999999876664 443 2     89999998    66666665555432  1  13555567778999


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      +||+|+.+.
T Consensus       189 ~aDIVi~aT  197 (314)
T PRK06141        189 QADIISCAT  197 (314)
T ss_pred             cCCEEEEee
Confidence            999997653

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.025  Score=50.02  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|+..|.       +|++++++
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~   39 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARH   39 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            36899999999999999999999887       89999998

>PLN02712 arogenate dehydrogenase

Probab=96.72  E-value=0.021  Score=58.73  Aligned_cols=64  Identities=14%  Similarity=0.200  Sum_probs=44.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-   82 (329)
                      +++||+|||. |.+|.+++..|...|.       +|..+|++    ... + .+.++     .    +...++..+.+. 
T Consensus       368 ~~~kIgIIGl-G~mG~slA~~L~~~G~-------~V~~~dr~----~~~-~-~a~~~-----G----v~~~~~~~el~~~  424 (667)
T PLN02712        368 SKLKIAIVGF-GNFGQFLAKTMVKQGH-------TVLAYSRS----DYS-D-EAQKL-----G----VSYFSDADDLCEE  424 (667)
T ss_pred             CCCEEEEEec-CHHHHHHHHHHHHCcC-------EEEEEECC----hHH-H-HHHHc-----C----CeEeCCHHHHHhc
Confidence            4589999998 9999999999998775       89999998    221 1 11111     1    123345555554 


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      ++|+||++
T Consensus       425 ~aDvVILa  432 (667)
T PLN02712        425 HPEVILLC  432 (667)
T ss_pred             CCCEEEEC
Confidence            58999998

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.71  E-value=0.008  Score=51.11  Aligned_cols=32  Identities=34%  Similarity=0.642  Sum_probs=29.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+|+|+ |.+|+.++..|+..|. +     +++|+|.+
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gv-g-----~i~lvD~D   32 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGV-G-----NLKLVDFD   32 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence            6899998 9999999999999887 3     79999998

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.71  E-value=0.011  Score=55.09  Aligned_cols=92  Identities=16%  Similarity=0.205  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.||+.+|..|...|.       +|..||..    .+...+    ...        +....++.+.+++|
T Consensus       136 g~tvgIvG~-G~IG~~vA~~l~afG~-------~V~~~~~~----~~~~~~----~~~--------~~~~~~l~e~l~~a  191 (312)
T PRK15469        136 DFTIGILGA-GVLGSKVAQSLQTWGF-------PLRCWSRS----RKSWPG----VQS--------FAGREELSAFLSQT  191 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----CCCCCC----cee--------ecccccHHHHHhcC
Confidence            479999999 9999999999998887       89999987    221111    000        11123567899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.....           .+..++-  .+.+... +|++++||++-
T Consensus       192 Dvvv~~lPlt~-----------~T~~li~--~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        192 RVLINLLPNTP-----------ETVGIIN--QQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             CEEEECCCCCH-----------HHHHHhH--HHHHhcC-CCCcEEEECCC
Confidence            99999732211           1112221  3445554 58899999983

>PRK07574 formate dehydrogenase; Provisional

Probab=96.70  E-value=0.0089  Score=57.25  Aligned_cols=94  Identities=15%  Similarity=0.253  Sum_probs=60.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.||+.+|..|...|.       +|..+|+.    ....+     .....     .++...++.+.++.|
T Consensus       192 gktVGIvG~-G~IG~~vA~~l~~fG~-------~V~~~dr~----~~~~~-----~~~~~-----g~~~~~~l~ell~~a  249 (385)
T PRK07574        192 GMTVGIVGA-GRIGLAVLRRLKPFDV-------KLHYTDRH----RLPEE-----VEQEL-----GLTYHVSFDSLVSVC  249 (385)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEECCC----CCchh-----hHhhc-----CceecCCHHHHhhcC
Confidence            478999999 9999999999998777       89999987    21111     11100     122234577899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|++......           .+-.++-  .+.+... ++++++||++-
T Consensus       250 DvV~l~lPlt~-----------~T~~li~--~~~l~~m-k~ga~lIN~aR  285 (385)
T PRK07574        250 DVVTIHCPLHP-----------ETEHLFD--ADVLSRM-KRGSYLVNTAR  285 (385)
T ss_pred             CEEEEcCCCCH-----------HHHHHhC--HHHHhcC-CCCcEEEECCC
Confidence            99999733211           1111111  2344443 57899999973

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.014  Score=51.42  Aligned_cols=113  Identities=12%  Similarity=0.076  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc-cchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ-KAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.+++..... ..+.....|+.+.          .....+.+..
T Consensus         5 ~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~----------~~~~~~~~~~   67 (235)
T PRK06550          5 TKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKPDLSGNFHFLQLDLSDD----------LEPLFDWVPS   67 (235)
T ss_pred             CCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCcccccCCcEEEEECChHHH----------HHHHHHhhCC
Confidence            46899999999999999999999887       8999998721100 0000011111110          0112234567


Q ss_pred             ccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                      .|++|+.+|...  .+  ..+   ....+..|+.....+.+.+....  .+.+.+++++-
T Consensus        68 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  127 (235)
T PRK06550         68 VDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS  127 (235)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            899999988542  11  112   22345566655444444443221  13345666553

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.01  Score=53.04  Aligned_cols=34  Identities=18%  Similarity=0.156  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|++++..|+..|.       +|.+++++
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~   42 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRR   42 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            37899999999999999999999887       89999998

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.69  E-value=0.0099  Score=51.97  Aligned_cols=96  Identities=16%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|..+...+..+. .+.+   -+.+||.+    .+++..    +...   ....  .+++..+.+.+.|
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~-~~~e---~v~v~D~~----~ek~~~----~~~~---~~~~--~~s~ide~~~~~D   62 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGR-VDFE---LVAVYDRD----EEKAKE----LEAS---VGRR--CVSDIDELIAEVD   62 (255)
T ss_pred             CeEEEEec-cHHHHHHHHHHhcCC-ccee---EEEEecCC----HHHHHH----HHhh---cCCC--ccccHHHHhhccc
Confidence            58999998 999999887776553 2212   68889998    444432    2211   1111  1255666779999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +++.+|+.                +.+++++.++-+.+ .|.+|+-++--+
T Consensus        63 lvVEaAS~----------------~Av~e~~~~~L~~g-~d~iV~SVGALa   96 (255)
T COG1712          63 LVVEAASP----------------EAVREYVPKILKAG-IDVIVMSVGALA   96 (255)
T ss_pred             eeeeeCCH----------------HHHHHHhHHHHhcC-CCEEEEechhcc
Confidence            99998753                68899998888875 787776665444

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.69  E-value=0.0061  Score=57.15  Aligned_cols=74  Identities=11%  Similarity=0.151  Sum_probs=51.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+++|+|+ |..|...+..++...-+.     +|.++|++    .++.+....++++.. +  ..+....+..+++.++
T Consensus       127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~-----~v~v~~r~----~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~~~a  193 (325)
T PRK08618        127 AKTLCLIGT-GGQAKGQLEAVLAVRDIE-----RVRVYSRT----FEKAYAFAQEIQSKF-N--TEIYVVNSADEAIEEA  193 (325)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHhcCCcc-----EEEEECCC----HHHHHHHHHHHHHhc-C--CcEEEeCCHHHHHhcC
Confidence            478999998 999988777665432233     89999999    666665555554321 1  1344556677899999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+.+.
T Consensus       194 DiVi~aT  200 (325)
T PRK08618        194 DIIVTVT  200 (325)
T ss_pred             CEEEEcc
Confidence            9999874

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.68  E-value=0.0051  Score=59.72  Aligned_cols=105  Identities=13%  Similarity=0.159  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|+|+ |.+|..++..|...|..      +|+++|++    .+++...+..+...      .+ ...+..+++.++
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~------~V~v~~rs----~~ra~~la~~~g~~------~i-~~~~l~~~l~~a  241 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVG------KILIANRT----YERAEDLAKELGGE------AV-KFEDLEEYLAEA  241 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCC------EEEEEeCC----HHHHHHHHHHcCCe------Ee-eHHHHHHHHhhC
Confidence            479999998 99999999999887743      79999998    44444333322210      11 113456788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                      |+||.+.+.+.. -.+            .+..+....--....+++-+++|-|+-.
T Consensus       242 DvVi~aT~s~~~-ii~------------~e~l~~~~~~~~~~~~viDla~Prdid~  284 (417)
T TIGR01035       242 DIVISSTGAPHP-IVS------------KEDVERALRERTRPLFIIDIAVPRDVDP  284 (417)
T ss_pred             CEEEECCCCCCc-eEc------------HHHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence            999998655431 011            1111222111012458888999977643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08324 short chain dehydrogenase; Validated

Probab=96.68  E-value=0.0072  Score=62.43  Aligned_cols=116  Identities=16%  Similarity=0.157  Sum_probs=64.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccc---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITA---   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~a---   80 (329)
                      +++.|+||+|.+|..++..|+..|.       +|+++|++    .+.++.....+............++  .+..++   
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~----~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~  491 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLD----EEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEE  491 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCC----HHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHH
Confidence            6899999999999999999999886       89999998    4444333222321100000001111  111112   


Q ss_pred             ----cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEc
Q psy9582          81 ----FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 ----l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~t  133 (329)
                          ..+.|+||.++|.....   ..+   ....+..|+.....+    .+.+++.. ..+.|++++
T Consensus       492 ~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vs  557 (681)
T PRK08324        492 AALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIA  557 (681)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEEC
Confidence                34689999998864321   112   223345555544444    44444432 235565555

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.68  E-value=0.0089  Score=53.89  Aligned_cols=118  Identities=13%  Similarity=0.096  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN-----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~-----   76 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.+++    .++++....++.......   ..+++-..+     
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDIN----QELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMV   78 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            36799999999999999999999887       89999887    444443333333211000   001100001     


Q ss_pred             --cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 --PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                        ..+.+...|++|+++|.... +  ..+   ....+..|....    +.+.+.+.+.  ..+.|++++..
T Consensus        79 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS~  147 (265)
T PRK07097         79 SQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK--GHGKIINICSM  147 (265)
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCc
Confidence              11223457999999886321 1  111   223344555433    3444445442  34566676654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.67  E-value=0.0034  Score=55.73  Aligned_cols=104  Identities=20%  Similarity=0.237  Sum_probs=61.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC----CcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS----NKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~----~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ..||.|+|| |.+|..++..|...|.-. +   +|+++|++    .+. .+.+......+.+.. .. ..  ...++.++
T Consensus        25 ~~rvlvlGA-GgAg~aiA~~L~~~G~~~-~---~i~ivdr~gl~~~~r-~~~L~~~~~~la~~~-~~-~~--~~~~l~~~   94 (226)
T cd05311          25 EVKIVINGA-GAAGIAIARLLLAAGAKP-E---NIVVVDSKGVIYEGR-EDDLNPDKNEIAKET-NP-EK--TGGTLKEA   94 (226)
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHcCcCc-c---eEEEEeCCCcccccc-chhhhHHHHHHHHHh-cc-Cc--ccCCHHHH
Confidence            469999999 999999999999887631 1   69999998    111 011111222222111 00 01  11245688


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      ++++|+||-+.+    +|+-       +    .+..+.|.    ++.+++..+||..
T Consensus        95 l~~~dvlIgaT~----~G~~-------~----~~~l~~m~----~~~ivf~lsnP~~  132 (226)
T cd05311          95 LKGADVFIGVSR----PGVV-------K----KEMIKKMA----KDPIVFALANPVP  132 (226)
T ss_pred             HhcCCEEEeCCC----CCCC-------C----HHHHHhhC----CCCEEEEeCCCCC
Confidence            899999998754    3321       0    13333332    4557777889974

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.0033  Score=56.39  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|+.++..|++.|.       +|++++++
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~   42 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARS   42 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCC
Confidence            37899999999999999999999887       89999987

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=96.65  E-value=0.0075  Score=56.58  Aligned_cols=73  Identities=15%  Similarity=0.256  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..+++|||+ |..|...+..|.. .++ .     +|++++++    .++++..+.++.+.. +  .++....+..+++.+
T Consensus       129 ~~~v~iiGa-G~qA~~~~~al~~~~~i-~-----~v~V~~R~----~~~a~~~a~~~~~~~-g--~~v~~~~~~~~av~~  194 (326)
T TIGR02992       129 SSVVAIFGA-GMQARLQLEALTLVRDI-R-----SARIWARD----SAKAEALALQLSSLL-G--IDVTAATDPRAAMSG  194 (326)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHhCCc-c-----EEEEECCC----HHHHHHHHHHHHhhc-C--ceEEEeCCHHHHhcc
Confidence            468999998 9999988888874 443 3     89999999    666666655554321 1  234555677889999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+.+.
T Consensus       195 aDiVvtaT  202 (326)
T TIGR02992       195 ADIIVTTT  202 (326)
T ss_pred             CCEEEEec
Confidence            99999874

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.64  E-value=0.0083  Score=53.33  Aligned_cols=32  Identities=25%  Similarity=0.175  Sum_probs=27.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +|.|+||+|++|+.++..|++.|.       +|++.+.+
T Consensus         4 ~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~   35 (248)
T PRK06947          4 VVLITGASRGIGRATAVLAAARGW-------SVGINYAR   35 (248)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            799999999999999999999886       77776543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.64  E-value=0.0036  Score=56.43  Aligned_cols=34  Identities=18%  Similarity=0.196  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.|++
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~   42 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIH   42 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            46899999999999999999999987       89999988

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.011  Score=50.79  Aligned_cols=105  Identities=11%  Similarity=0.058  Sum_probs=60.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |++.|+||+|.+|..++..|++. .       +|.+.+++    .+.   ...|+.+...     +   ....+.+...|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~----~~~---~~~D~~~~~~-----~---~~~~~~~~~id   57 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRS----SGD---VQVDITDPAS-----I---RALFEKVGKVD   57 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecC----CCc---eEecCCChHH-----H---HHHHHhcCCCC
Confidence            37999999999999999999887 3       79999887    221   2234433210     0   00112234689


Q ss_pred             EEEEeCCCCCC-C--CCCHH---HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRK-S--NMERS---ELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~-~--g~~~~---~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++|..+|.... +  ..+..   ..+..|+.....+.+...++-.+.+.+++++
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            99998886431 1  12222   3344566555555554444322344555554

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.017  Score=51.41  Aligned_cols=33  Identities=15%  Similarity=0.184  Sum_probs=30.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|++|++++..|++.|.       +|.+++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~   34 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGT-------HVISISRT   34 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCC
Confidence            3799999999999999999999887       89999987

>PRK06484 short chain dehydrogenase; Validated

Probab=96.63  E-value=0.0043  Score=61.71  Aligned_cols=120  Identities=16%  Similarity=0.197  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------   77 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.|++    .++++.....+......+..++.-..+.       
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  337 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRD----AEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI  337 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       89999998    4444332222211000000011000111       


Q ss_pred             ccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.+...|++|+.+|...  .+  ..+   ....+..|+.....+.+.+..+-...+.||++|..
T Consensus       338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            112345799999988642  12  122   33456667766655555554443344677777654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=96.63  E-value=0.0049  Score=56.57  Aligned_cols=95  Identities=15%  Similarity=0.181  Sum_probs=60.2

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--CccE
Q psy9582           9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--DANI   86 (329)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~aDi   86 (329)
                      .|+||+|++|++++..|+..+.       ++++....    .   +   .|+.+..           ++.+.++  +.|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~----~---~---~Dl~~~~-----------~l~~~~~~~~~d~   52 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTH----K---E---LDLTRQA-----------DVEAFFAKEKPTY   52 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC-------cEEEeecc----c---c---CCCCCHH-----------HHHHHHhccCCCE
Confidence            3899999999999999998876       55554433    1   1   2333211           1222222  5799


Q ss_pred             EEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          87 AILIGSFPRK---SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        87 Vi~~~g~~~~---~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ||++|+....   ......+....|......+++.+++.. .. .+|.+|
T Consensus        53 Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~-~~i~~S  100 (306)
T PLN02725         53 VILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VK-KLLFLG  100 (306)
T ss_pred             EEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CC-eEEEeC
Confidence            9999875321   112344567889999999999999863 33 344443

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.63  E-value=0.0073  Score=56.11  Aligned_cols=73  Identities=5%  Similarity=-0.024  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ...+++|+|+ |..|...+..+.. .+. .     +|.++|++    .++++..+..+.+..    ..+. ..+..+++.
T Consensus       124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~-~-----~v~v~~r~----~~~a~~~a~~~~~~~----~~~~-~~~~~~av~  187 (304)
T PRK07340        124 PPGDLLLIGT-GVQARAHLEAFAAGLPV-R-----RVWVRGRT----AASAAAFCAHARALG----PTAE-PLDGEAIPE  187 (304)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHhCCC-C-----EEEEEcCC----HHHHHHHHHHHHhcC----CeeE-ECCHHHHhh
Confidence            3579999998 9999999988875 443 2     89999999    666666655554321    1222 356678999


Q ss_pred             CccEEEEeCC
Q psy9582          83 DANIAILIGS   92 (329)
Q Consensus        83 ~aDiVi~~~g   92 (329)
                      +||+|+.+..
T Consensus       188 ~aDiVitaT~  197 (304)
T PRK07340        188 AVDLVVTATT  197 (304)
T ss_pred             cCCEEEEccC
Confidence            9999998743

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.63  E-value=0.0051  Score=54.80  Aligned_cols=34  Identities=21%  Similarity=0.330  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|+.++..|++.|.       ++++++++
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~   41 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQA   41 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence            36899999999999999999999887       89999987

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.028  Score=51.17  Aligned_cols=113  Identities=13%  Similarity=0.158  Sum_probs=61.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cccc----
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NPIT----   79 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~~~----   79 (329)
                      .+.|+|| |++|.+++..|. .|.       +|++.|++    .+.++....++....... .....++.  +..+    
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~-------~Vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~   70 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGK-------KVLLADYN----EENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAAT   70 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence            5667776 899999999986 565       89999998    333433333332211000 00111111  1111    


Q ss_pred             --ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          80 --AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        80 --al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        .+...|++|..+|... ...+....+..|+.....+.+.+.+...+++.+++++
T Consensus        71 ~~~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~is  125 (275)
T PRK06940         71 AQTLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIA  125 (275)
T ss_pred             HHhcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEE
Confidence              1246899999998753 2234556677777666655555544322233344444

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.052  Score=48.42  Aligned_cols=116  Identities=13%  Similarity=0.101  Sum_probs=64.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Ccc----
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NPI----   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~~----   78 (329)
                      +++.|+||+|.+|.+++..|++.|.       .|++.|++    .+.++....++....... .....++.  +..    
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   70 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRT----KEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVE   70 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            5789999999999999999999887       89999998    444443333333211000 00111111  111    


Q ss_pred             ---cccCCccEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEc
Q psy9582          79 ---TAFKDANIAILIGSFPRK-S--NMER---SELLAINSSIFIEQGKAL----NSVASRDVKVLVVG  133 (329)
Q Consensus        79 ---~al~~aDiVi~~~g~~~~-~--g~~~---~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~t  133 (329)
                         +.+...|++|..+|.... +  ..+.   ...+..|+.....+.+.+    .+.. ..+.++++|
T Consensus        71 ~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~ii~is  137 (252)
T PRK07677         71 QIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG-IKGNIINMV  137 (252)
T ss_pred             HHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CCEEEEEEc
Confidence               113467999998875321 1  2222   334555655444444443    3322 346677766

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.61  E-value=0.0033  Score=56.35  Aligned_cols=34  Identities=15%  Similarity=0.137  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|++++++
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~   41 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVA   41 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCc
Confidence            47899999999999999999999987       89999876

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.0078  Score=52.83  Aligned_cols=33  Identities=15%  Similarity=0.189  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|++++..|++.|.       +|.++|++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~   34 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-------QVTATVRG   34 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCC
Confidence            4699999999999999999999887       89999998

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.0082  Score=54.42  Aligned_cols=33  Identities=15%  Similarity=0.113  Sum_probs=30.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|..++..|+..|.       +|++.+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~   34 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-------EVWATARK   34 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            3699999999999999999998887       89999988

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.58  E-value=0.014  Score=55.63  Aligned_cols=58  Identities=17%  Similarity=0.235  Sum_probs=43.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |-..++|+|||.+|-+|+.++..|.+. +.       +|+-+|.+    .+.                     ..+..+.
T Consensus         1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~-------~V~g~D~~----d~~---------------------~~~~~~~   48 (370)
T PRK08818          1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQL-------EVIGHDPA----DPG---------------------SLDPATL   48 (370)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhcCCC-------EEEEEcCC----ccc---------------------cCCHHHH
Confidence            334589999998899999999999975 33       88888875    110                     0133567


Q ss_pred             cCCccEEEEeC
Q psy9582          81 FKDANIAILIG   91 (329)
Q Consensus        81 l~~aDiVi~~~   91 (329)
                      +++||+||++.
T Consensus        49 v~~aDlVilav   59 (370)
T PRK08818         49 LQRADVLIFSA   59 (370)
T ss_pred             hcCCCEEEEeC
Confidence            88999999983

>PRK06823 ornithine cyclodeaminase; Validated

Probab=96.57  E-value=0.01  Score=55.34  Aligned_cols=74  Identities=15%  Similarity=0.067  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ....++|+|+ |..+...+..+....-+.     +|++||++    .++.+..+..+++.    ..++....+..+++++
T Consensus       127 d~~~l~iiG~-G~qA~~~~~a~~~v~~i~-----~v~v~~r~----~~~a~~~~~~~~~~----~~~v~~~~~~~~av~~  192 (315)
T PRK06823        127 HVSAIGIVGT-GIQARMQLMYLKNVTDCR-----QLWVWGRS----ETALEEYRQYAQAL----GFAVNTTLDAAEVAHA  192 (315)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhcCCCC-----EEEEECCC----HHHHHHHHHHHHhc----CCcEEEECCHHHHhcC
Confidence            3579999998 999988877777643333     99999999    66666554444332    1246666778899999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+.+.
T Consensus       193 ADIV~taT  200 (315)
T PRK06823        193 ANLIVTTT  200 (315)
T ss_pred             CCEEEEec
Confidence            99999763

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.56  E-value=0.0061  Score=56.86  Aligned_cols=72  Identities=15%  Similarity=0.199  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +..+++|+|+ |..+...+..+.. .+ +.     +|++||++    .++++..+.++++ .   ...+....+.+++++
T Consensus       127 ~~~~l~viGa-G~QA~~~~~a~~~~~~-i~-----~v~v~~r~----~~~~~~~~~~~~~-~---~~~v~~~~~~~~av~  191 (313)
T PF02423_consen  127 DARTLGVIGA-GVQARWHLRALAAVRP-IK-----EVRVYSRS----PERAEAFAARLRD-L---GVPVVAVDSAEEAVR  191 (313)
T ss_dssp             T--EEEEE---SHHHHHHHHHHHHHS---S-----EEEEE-SS----HHHHHHHHHHHHC-C---CTCEEEESSHHHHHT
T ss_pred             CCceEEEECC-CHHHHHHHHHHHHhCC-ce-----EEEEEccC----hhHHHHHHHhhcc-c---cccceeccchhhhcc
Confidence            3578999998 9999888777765 45 44     99999999    6677767667765 1   235677788899999


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +||+|+.+
T Consensus       192 ~aDii~ta  199 (313)
T PF02423_consen  192 GADIIVTA  199 (313)
T ss_dssp             TSSEEEE-
T ss_pred             cCCEEEEc
Confidence            99998875

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.56  E-value=0.0096  Score=54.34  Aligned_cols=32  Identities=19%  Similarity=0.254  Sum_probs=29.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||.|+||+|++|++++..|++.|.       +|+.+.++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~   32 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRS   32 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCC
Confidence            589999999999999999999887       89999998

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK05855 short chain dehydrogenase; Validated

Probab=96.54  E-value=0.0082  Score=60.19  Aligned_cols=118  Identities=14%  Similarity=0.091  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~----   77 (329)
                      ..++.|+||+|++|.+++..|++.|.       +|++.+++    .+.++....++....... .....++.  +.    
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGA-------EVVASDID----EAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            36899999999999999999999987       89999998    444444433443211000 00011110  11    


Q ss_pred             ---ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|++|+.+|.....   ..+   ....+..|+.....    +.+.+.+.. ..+.||++|-
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS  452 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVAS  452 (582)
T ss_pred             HHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECC
Confidence               11233579999999875321   112   22345566544444    444555542 3456666654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.53  E-value=0.012  Score=53.95  Aligned_cols=73  Identities=14%  Similarity=0.123  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..++.|+|+ |.+|.+++..|...|..      +|++++++    .++++..+.++....     .+.+..+..+.+.++
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~------~V~v~~R~----~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~  186 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGVA------EITIVNRT----VERAEELAKLFGALG-----KAELDLELQEELADF  186 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCC------EEEEEeCC----HHHHHHHHHHhhhcc-----ceeecccchhccccC
Confidence            468999998 99999999999988853      89999998    555554443333211     122212345678899


Q ss_pred             cEEEEeCCC
Q psy9582          85 NIAILIGSF   93 (329)
Q Consensus        85 DiVi~~~g~   93 (329)
                      |+||.+...
T Consensus       187 DivInaTp~  195 (278)
T PRK00258        187 DLIINATSA  195 (278)
T ss_pred             CEEEECCcC
Confidence            999997543

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.52  E-value=0.016  Score=52.75  Aligned_cols=67  Identities=13%  Similarity=0.199  Sum_probs=44.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +||+|||+ |.+|..++..+...+. +    .+ +.++|++    .++.+.    +.+.   +  .....++..+.+.++
T Consensus         2 mrIgIIG~-G~iG~~ia~~l~~~~~-~----~elv~v~d~~----~~~a~~----~a~~---~--~~~~~~~~~ell~~~   62 (265)
T PRK13304          2 LKIGIVGC-GAIASLITKAILSGRI-N----AELYAFYDRN----LEKAEN----LASK---T--GAKACLSIDELVEDV   62 (265)
T ss_pred             CEEEEECc-cHHHHHHHHHHHcCCC-C----eEEEEEECCC----HHHHHH----HHHh---c--CCeeECCHHHHhcCC
Confidence            48999998 9999999998887541 1    13 5688888    443332    2111   1  123345556666899


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|++++
T Consensus        63 DvVvi~a   69 (265)
T PRK13304         63 DLVVECA   69 (265)
T ss_pred             CEEEEcC
Confidence            9999985

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.52  E-value=0.0076  Score=56.77  Aligned_cols=77  Identities=21%  Similarity=0.388  Sum_probs=49.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |..+++||+|+||+|.+|..+...|.....+.-.   +|.++....      -.|....+..      .++.+..-..++
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~---~l~~~aS~~------saGk~~~~~~------~~l~v~~~~~~~   65 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIA---EVTLLSSKR------SAGKTVQFKG------REIIIQEAKINS   65 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcc---cEEEEECcc------cCCCCeeeCC------cceEEEeCCHHH
Confidence            4456789999999999999999988865554211   588886651      1222222211      134443323456


Q ss_pred             cCCccEEEEeCC
Q psy9582          81 FKDANIAILIGS   92 (329)
Q Consensus        81 l~~aDiVi~~~g   92 (329)
                      ++++|+||++++
T Consensus        66 ~~~~Divf~a~~   77 (347)
T PRK06728         66 FEGVDIAFFSAG   77 (347)
T ss_pred             hcCCCEEEECCC
Confidence            789999999754

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=96.52  E-value=0.0034  Score=57.74  Aligned_cols=98  Identities=19%  Similarity=0.292  Sum_probs=58.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|.+|+++...|...+.       +++.+++.+           .|+.+.. .    +   ....+.. .-|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~~-----------~dl~d~~-~----~---~~~~~~~-~pd   53 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY-------EVIATSRSD-----------LDLTDPE-A----V---AKLLEAF-KPD   53 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTTC-----------S-TTSHH-H----H---HHHHHHH---S
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCchh-----------cCCCCHH-H----H---HHHHHHh-CCC
Confidence            6899999999999999999998876       788885541           1222211 0    0   0111222 478


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++++.....  ..........|+.....+++...+.   ++.+|.+|
T Consensus        54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~S  100 (286)
T PF04321_consen   54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER---GARLIHIS  100 (286)
T ss_dssp             EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEE
T ss_pred             eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEee
Confidence            999998764311  1234455678999999999988875   34555554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.014  Score=53.59  Aligned_cols=35  Identities=20%  Similarity=0.230  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.+.|+||++.+|.+++..|++.|.       +|++.|++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~   39 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIG   39 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCC
Confidence            347899999999999999999999887       89999876

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.50  E-value=0.0079  Score=52.90  Aligned_cols=118  Identities=15%  Similarity=0.190  Sum_probs=65.2

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCccccc---
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITAF---   81 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~al---   81 (329)
                      |.|+|++|.+|+.++..|++.|.       +|.+.+++.   .+.+.....++.+..... .....++  .+..+.+   
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   70 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSS---EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEI   70 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999887       899998872   122333333333221000 0011111  1111222   


Q ss_pred             ----CCccEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          82 ----KDANIAILIGSFPRKS---N---MERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        82 ----~~aDiVi~~~g~~~~~---g---~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                          ...|+||+.+|.....   +   ......+..|+.....+.+.+.++.  .....++++|-.
T Consensus        71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  136 (239)
T TIGR01830        71 EEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV  136 (239)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence                3469999988764211   1   1233455677776666666665442  123455665543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.50  E-value=0.0076  Score=54.98  Aligned_cols=36  Identities=22%  Similarity=0.122  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+.+.|+||+  +.+|..++..|++.|.       .|++.|++
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~   40 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLN   40 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecC
Confidence            345789999996  6899999999999987       89999987

>PLN03139 formate dehydrogenase; Provisional

Probab=96.49  E-value=0.013  Score=56.02  Aligned_cols=94  Identities=11%  Similarity=0.191  Sum_probs=60.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.||+.+|..|..-|.       +|..+|..    ....+ ..   .+.      .+....++.+.+++|
T Consensus       199 gktVGIVG~-G~IG~~vA~~L~afG~-------~V~~~d~~----~~~~~-~~---~~~------g~~~~~~l~ell~~s  256 (386)
T PLN03139        199 GKTVGTVGA-GRIGRLLLQRLKPFNC-------NLLYHDRL----KMDPE-LE---KET------GAKFEEDLDAMLPKC  256 (386)
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC-------EEEEECCC----Ccchh-hH---hhc------CceecCCHHHHHhhC
Confidence            479999998 9999999999998776       89999987    21111 10   111      122234677889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|++......           .+..++-  .+.+... +|++++|+++-
T Consensus       257 DvV~l~lPlt~-----------~T~~li~--~~~l~~m-k~ga~lIN~aR  292 (386)
T PLN03139        257 DVVVINTPLTE-----------KTRGMFN--KERIAKM-KKGVLIVNNAR  292 (386)
T ss_pred             CEEEEeCCCCH-----------HHHHHhC--HHHHhhC-CCCeEEEECCC
Confidence            99999732211           1111221  2344444 58899999873

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.48  E-value=0.032  Score=57.53  Aligned_cols=87  Identities=9%  Similarity=0.074  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE--ecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL--EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~--D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      .|||.|+||+|++|++++..|...+.       ++...  |+.     + ......++.                  . .
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~~~~l~-----d-~~~v~~~i~------------------~-~  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYGKGRLE-----D-RSSLLADIR------------------N-V  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCC-------eEEeeccccc-----c-HHHHHHHHH------------------h-h
Confidence            47999999999999999999988775       55311  111     0 000000110                  0 2


Q ss_pred             CccEEEEeCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          83 DANIAILIGSFPRKS--N---MERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~--g---~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      +.|+||++|+....+  +   ....+.+..|+.....+++.+++..
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g  473 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG  473 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC
Confidence            579999998764322  1   2345667899999999999999863

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=96.48  E-value=0.012  Score=53.74  Aligned_cols=95  Identities=18%  Similarity=0.318  Sum_probs=66.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      |||.|+|++|.+|+.|...|. .+.       +|.-.|..    .       +|+.+..           ...+.++  .
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~-------~v~a~~~~----~-------~Ditd~~-----------~v~~~i~~~~   50 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEF-------EVIATDRA----E-------LDITDPD-----------AVLEVIRETR   50 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCc-------eEEeccCc----c-------ccccChH-----------HHHHHHHhhC
Confidence            459999999999999988887 433       78877776    2       3443321           1233444  3


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      -|+||++|....-.  ..++..-+..|+.....+++..++++   +++|.+|
T Consensus        51 PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiS   99 (281)
T COG1091          51 PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHIS   99 (281)
T ss_pred             CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEee
Confidence            49999998865432  23456667899999999999999874   4655554

>PRK07589 ornithine cyclodeaminase; Validated

Probab=96.45  E-value=0.0096  Score=56.22  Aligned_cols=73  Identities=10%  Similarity=0.077  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+++|||+ |..+...+..++.-.-+.     +|++||++    .++.+..+.++++.  +  .++....+..+++++|
T Consensus       129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~-----~V~v~~r~----~~~a~~~~~~~~~~--~--~~v~~~~~~~~av~~A  194 (346)
T PRK07589        129 SRTMALIGN-GAQSEFQALAFKALLGIE-----EIRLYDID----PAATAKLARNLAGP--G--LRIVACRSVAEAVEGA  194 (346)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHHhCCce-----EEEEEeCC----HHHHHHHHHHHHhc--C--CcEEEeCCHHHHHhcC
Confidence            578999998 999987776665532233     99999999    66666666666542  1  2466677889999999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+.+.
T Consensus       195 DIIvtaT  201 (346)
T PRK07589        195 DIITTVT  201 (346)
T ss_pred             CEEEEec
Confidence            9999864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.43  E-value=0.0096  Score=54.82  Aligned_cols=102  Identities=14%  Similarity=0.148  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+++|+|+ |.+|..++..|...|.       +|+++|++    .+++.. .   ...  .. ..+. ..++.+.++++
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~-------~V~v~~R~----~~~~~~-~---~~~--g~-~~~~-~~~l~~~l~~a  210 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGA-------RVFVGARS----SADLAR-I---TEM--GL-IPFP-LNKLEEKVAEI  210 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH-H---HHC--CC-eeec-HHHHHHHhccC
Confidence            479999999 9999999999998886       89999998    333221 1   111  11 0111 13456788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYITMK  145 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~~~  145 (329)
                      |+||.+....         ++  +    .   +.+... ++++++|.++ +|-..--..+.+
T Consensus       211 DiVint~P~~---------ii--~----~---~~l~~~-k~~aliIDlas~Pg~tdf~~Ak~  253 (287)
T TIGR02853       211 DIVINTIPAL---------VL--T----A---DVLSKL-PKHAVIIDLASKPGGTDFEYAKK  253 (287)
T ss_pred             CEEEECCChH---------Hh--C----H---HHHhcC-CCCeEEEEeCcCCCCCCHHHHHH
Confidence            9999974211         11  1    1   223333 4788888774 775532244444

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN02858 fructose-bisphosphate aldolase

Probab=96.43  E-value=0.012  Score=64.96  Aligned_cols=68  Identities=13%  Similarity=0.195  Sum_probs=51.7

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |....||++||- |.||+.+|..|+..|.       +|..||++    .++.+    ++.+..      .....+..++.
T Consensus         1 ~~~~~~IGfIGL-G~MG~~mA~~L~~~G~-------~v~v~dr~----~~~~~----~l~~~G------a~~~~s~~e~a   58 (1378)
T PLN02858          1 AQSAGVVGFVGL-DSLSFELASSLLRSGF-------KVQAFEIS----TPLME----KFCELG------GHRCDSPAEAA   58 (1378)
T ss_pred             CCCCCeEEEEch-hHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHH----HHHHcC------CeecCCHHHHH
Confidence            455689999998 9999999999999987       89999998    44443    233221      22335567888


Q ss_pred             CCccEEEEeC
Q psy9582          82 KDANIAILIG   91 (329)
Q Consensus        82 ~~aDiVi~~~   91 (329)
                      ++||+||++.
T Consensus        59 ~~advVi~~l   68 (1378)
T PLN02858         59 KDAAALVVVL   68 (1378)
T ss_pred             hcCCEEEEEc
Confidence            9999999973

>TIGR01746 Thioester-redct thioester reductase domain

Probab=96.42  E-value=0.034  Score=52.02  Aligned_cols=118  Identities=15%  Similarity=0.088  Sum_probs=66.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc---CCc-cceEe-ecC-----
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF---PLL-VDVSV-HEN-----   76 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~-~~i~~-~~~-----   76 (329)
                      +|.|+||+|++|++++..|+..+...     +|+++.++... ....+.....+.....   ... ..+.. ..|     
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~-----~V~~l~R~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   74 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQA-----KVICLVRAASE-EHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPR   74 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCC-----EEEEEEccCCH-HHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCccc
Confidence            58899999999999999999887322     79999887211 0001111111111000   000 11211 111     


Q ss_pred             -------cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 -------PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 -------~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                             ..+..+++|+||++++... ...+..++...|+.....+.+.+.+.. ... ++.+|
T Consensus        75 ~gl~~~~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~-~v~iS  135 (367)
T TIGR01746        75 LGLSDAEWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGR-AKP-LHYVS  135 (367)
T ss_pred             CCcCHHHHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCC-Cce-EEEEc
Confidence                   2234578999999887533 122344556788888888888887753 343 44443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.41  E-value=0.0096  Score=55.15  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|+.
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~   45 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVA   45 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCC
Confidence            47899999999999999999999887       89999986

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.41  E-value=0.013  Score=51.04  Aligned_cols=68  Identities=12%  Similarity=0.135  Sum_probs=44.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--ecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--HENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--~~~~~~al   81 (329)
                      +.+||.|||| |.+|...+..|+..|.       +|++++..    .   .....++.+..     .+..  ..-.++.+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga-------~V~VIs~~----~---~~~l~~l~~~~-----~i~~~~~~~~~~~l   68 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGA-------HIVVISPE----L---TENLVKLVEEG-----KIRWKQKEFEPSDI   68 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEcCC----C---CHHHHHHHhCC-----CEEEEecCCChhhc
Confidence            3579999999 9999999999999885       89999765    1   11111222211     1111  11224578


Q ss_pred             CCccEEEEeC
Q psy9582          82 KDANIAILIG   91 (329)
Q Consensus        82 ~~aDiVi~~~   91 (329)
                      .++|+||.+.
T Consensus        69 ~~adlViaaT   78 (202)
T PRK06718         69 VDAFLVIAAT   78 (202)
T ss_pred             CCceEEEEcC
Confidence            9999988873

>PRK06199 ornithine cyclodeaminase; Validated

Probab=96.39  E-value=0.011  Score=56.48  Aligned_cols=77  Identities=13%  Similarity=0.252  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ....++|+|+ |..+...+..++. ..-+.     +|++||++    .++++..+.++.+.. +...++.+..+..++++
T Consensus       154 da~~l~iiG~-G~QA~~~l~a~~~v~~~i~-----~V~v~~r~----~~~a~~f~~~~~~~~-~~~~~v~~~~s~~eav~  222 (379)
T PRK06199        154 DSKVVGLLGP-GVMGKTILAAFMAVCPGID-----TIKIKGRG----QKSLDSFATWVAETY-PQITNVEVVDSIEEVVR  222 (379)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHhcCCcc-----EEEEECCC----HHHHHHHHHHHHHhc-CCCceEEEeCCHHHHHc
Confidence            3579999998 9999888877776 33244     99999999    667776666665421 11124777788899999


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      +||+|+.+.
T Consensus       223 ~ADIVvtaT  231 (379)
T PRK06199        223 GSDIVTYCN  231 (379)
T ss_pred             CCCEEEEcc
Confidence            999998753

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.39  E-value=0.0089  Score=56.19  Aligned_cols=75  Identities=17%  Similarity=0.280  Sum_probs=46.2

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |.+.+||+|+||+|.+|..+...|....+-.    .+|.++..+.      -.|....+..      .++.+..-...++
T Consensus         1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~----~~l~~laS~~------saG~~~~~~~------~~~~v~~~~~~~~   64 (336)
T PRK08040          1 MSEGWNIALLGATGAVGEALLELLAERQFPV----GELYALASEE------SAGETLRFGG------KSVTVQDAAEFDW   64 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhcCCCCc----eEEEEEEccC------cCCceEEECC------cceEEEeCchhhc
Confidence            4466899999999999999999888743210    1888885541      1122111211      1344432223345


Q ss_pred             CCccEEEEeCC
Q psy9582          82 KDANIAILIGS   92 (329)
Q Consensus        82 ~~aDiVi~~~g   92 (329)
                      .++|+||++.+
T Consensus        65 ~~~Dvvf~a~p   75 (336)
T PRK08040         65 SQAQLAFFVAG   75 (336)
T ss_pred             cCCCEEEECCC
Confidence            78999999754

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.38  E-value=0.011  Score=56.00  Aligned_cols=37  Identities=32%  Similarity=0.528  Sum_probs=30.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+  +||+|+||+|.+|+.++..|...+.+      +|+++...
T Consensus         1 ~~~--~~V~I~GatG~iG~~l~~~L~~~p~~------el~~~~~s   37 (349)
T PRK08664          1 MMK--LKVGILGATGMVGQRFVQLLANHPWF------EVTALAAS   37 (349)
T ss_pred             CCC--cEEEEECCCCHHHHHHHHHHHcCCCc------eEEEEEcC
Confidence            564  79999999999999999988876543      78888544

>PLN03129 NADP-dependent malic enzyme; Provisional

Probab=96.38  E-value=0.0063  Score=60.47  Aligned_cols=118  Identities=18%  Similarity=0.199  Sum_probs=75.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh-----CCCCCCCC-CceEEEEecCC--cccc-cchhhhHhhhhhcccCCccceEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN-----GDLLGKDQ-PIILQLLEASN--KKSQ-KAIKGVIMEIEDCIFPLLVDVSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-----~~~~~~~~-~~ei~L~D~~~--~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~   76 (329)
                      .||.+.|| |..|..++..|..     .|+- .++ .-.++++|.+-  -... +.+......+.       .......+
T Consensus       322 ~riv~~GA-GsAgigia~ll~~~~~~~~Gls-~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa-------~~~~~~~~  392 (581)
T PLN03129        322 QRILFAGA-GEAGTGIAELIALAMSRQTGIS-EEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFA-------HDHEPGAS  392 (581)
T ss_pred             ceEEEECC-CHHHHHHHHHHHHHHHhhcCCC-hhhhcCcEEEEcCCCeEeCCCCccChHHHHHHH-------hhcccCCC
Confidence            69999999 9999999988876     3542 122 12899999871  0000 00111111111       11112357


Q ss_pred             cccccCC--ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch---hhHHHHHHHHC
Q psy9582          77 PITAFKD--ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV---NTNTYITMKSA  147 (329)
Q Consensus        77 ~~~al~~--aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~---~~~~~~~~~~~  147 (329)
                      +.+++++  +|++|=+.+.+.              -..+++.+.|.+++ ++.+|.-.|||.   .+...-+.+.+
T Consensus       393 L~e~v~~vkptvLIG~S~~~g--------------~Ft~evi~~Ma~~~-~rPIIFaLSNPt~~~E~~pe~a~~~T  453 (581)
T PLN03129        393 LLEAVKAIKPTVLIGLSGVGG--------------TFTKEVLEAMASLN-ERPIIFALSNPTSKAECTAEEAYTWT  453 (581)
T ss_pred             HHHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcC-CCCEEEECCCCCCCcCcCHHHHHHhh
Confidence            8899999  898886644332              24567778888886 889999999997   56666677765

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.37  E-value=0.01  Score=52.51  Aligned_cols=33  Identities=24%  Similarity=0.121  Sum_probs=30.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|++++..|++.|.       .|.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~   35 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-------RVIATYFS   35 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            3799999999999999999998886       89999987

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.35  E-value=0.021  Score=51.16  Aligned_cols=34  Identities=12%  Similarity=0.141  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+.|+||+|.+|.+++..|++.|.       +|+++|.+
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~   43 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIV   43 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCc
Confidence            36799999999999999999999887       88888876

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.065  Score=49.81  Aligned_cols=34  Identities=24%  Similarity=0.289  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|..++..|++.|.       +|++.+++
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~   47 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRN   47 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            36899999999999999999999886       89999998

>KOG0409|consensus

Probab=96.34  E-value=0.0065  Score=55.31  Aligned_cols=68  Identities=18%  Similarity=0.378  Sum_probs=52.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+-||- |.+|++++..|+..|+       .|++||++    .++.+    ++++..      .++...+.|..+++
T Consensus        35 ~~~iGFIGL-G~MG~~M~~nLik~G~-------kVtV~dr~----~~k~~----~f~~~G------a~v~~sPaeVae~s   92 (327)
T KOG0409|consen   35 KTRIGFIGL-GNMGSAMVSNLIKAGY-------KVTVYDRT----KDKCK----EFQEAG------ARVANSPAEVAEDS   92 (327)
T ss_pred             cceeeEEee-ccchHHHHHHHHHcCC-------EEEEEeCc----HHHHH----HHHHhc------hhhhCCHHHHHhhc
Confidence            479999998 9999999999999998       99999999    44333    455432      12334567888999


Q ss_pred             cEEEEeCCCC
Q psy9582          85 NIAILIGSFP   94 (329)
Q Consensus        85 DiVi~~~g~~   94 (329)
                      |+||...+.|
T Consensus        93 Dvvitmv~~~  102 (327)
T KOG0409|consen   93 DVVITMVPNP  102 (327)
T ss_pred             CEEEEEcCCh
Confidence            9999875543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.32  E-value=0.04  Score=49.11  Aligned_cols=33  Identities=21%  Similarity=0.240  Sum_probs=30.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|++|++++..|++.|.       +|+++|++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~   35 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRP   35 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecC
Confidence            4799999999999999999999887       89999976

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.0096  Score=54.84  Aligned_cols=56  Identities=11%  Similarity=0.198  Sum_probs=46.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||.+|.||..++..|...|.       +|++++..    ..                        ++.+..+.|
T Consensus       159 Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~----t~------------------------~l~e~~~~A  203 (301)
T PRK14194        159 GKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSR----ST------------------------DAKALCRQA  203 (301)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCC----CC------------------------CHHHHHhcC
Confidence            57999999977999999999999887       89999876    21                        245677899


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.|.+.
T Consensus       204 DIVIsavg~~~  214 (301)
T PRK14194        204 DIVVAAVGRPR  214 (301)
T ss_pred             CEEEEecCChh
Confidence            99999877653

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.053  Score=49.19  Aligned_cols=33  Identities=18%  Similarity=0.212  Sum_probs=30.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.|+||+|.+|.+++..|+..|.       +|.+.+++
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~   43 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGF-------PVALGARR   43 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            5799999999999999999999887       89999887

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.28  E-value=0.023  Score=52.57  Aligned_cols=67  Identities=10%  Similarity=0.045  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..|++|+|+ |.+|..++..|...|.       +|.++|++    .++.+ .+.++     +.  ......++.+.++++
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~Ga-------~V~v~~r~----~~~~~-~~~~~-----G~--~~~~~~~l~~~l~~a  211 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALGA-------NVTVGARK----SAHLA-RITEM-----GL--SPFHLSELAEEVGKI  211 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHH-HHHHc-----CC--eeecHHHHHHHhCCC
Confidence            579999998 9999999999998886       89999998    33222 22111     11  111113456788999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+||.+.
T Consensus       212 DiVI~t~  218 (296)
T PRK08306        212 DIIFNTI  218 (296)
T ss_pred             CEEEECC
Confidence            9999974

>PRK08589 short chain dehydrogenase; Validated

Probab=96.28  E-value=0.087  Score=47.70  Aligned_cols=34  Identities=21%  Similarity=0.214  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|++++++
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~   39 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIA   39 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc
Confidence            46899999999999999999999987       89999987

>PRK06484 short chain dehydrogenase; Validated

Probab=96.28  E-value=0.013  Score=58.26  Aligned_cols=118  Identities=17%  Similarity=0.140  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------C
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------N   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~   76 (329)
                      +.+.+.|+||++.+|..++..|++.|.       .|.+++++    .++++....++......+..++.-..       .
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRN----VERARERADSLGPDHHALAMDVSDEAQIREGFEQ   72 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHH
Confidence            446889999999999999999999987       89999998    44443332222110000000111000       1


Q ss_pred             cccccCCccEEEEeCCCCC---CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 PITAFKDANIAILIGSFPR---KS--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~---~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..+.+...|++|+.+|...   .+  ..+   ....+..|+..    .+.+.+.+.+. +..+.|++++
T Consensus        73 ~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~~iv~is  140 (520)
T PRK06484         73 LHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQ-GHGAAIVNVA  140 (520)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCCeEEEEC
Confidence            1222356899999988621   11  122   33445556554    44445555442 2333666665

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.28  E-value=0.01  Score=53.22  Aligned_cols=35  Identities=14%  Similarity=0.163  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.+.|+||+  +.+|..++..|++.|.       +|++.+++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~   42 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQN   42 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCc
Confidence            34689999997  6999999999999987       89999886

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.021  Score=50.22  Aligned_cols=34  Identities=26%  Similarity=0.306  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|.+|..++..|++.|.       +|++++++
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~   36 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARS   36 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            36899999999999999999999886       89999987

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.27  E-value=0.019  Score=49.59  Aligned_cols=117  Identities=15%  Similarity=0.127  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-------eec
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-------VHE   75 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-------~~~   75 (329)
                      .....|.|+||+.++|..+|..+.+.|.       +|.+..++    ++++.+......... ....++.       ...
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~----e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lve   70 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRN----EERLAEAKAENPEIH-TEVCDVADRDSRRELVE   70 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCc----HHHHHHHHhcCcchh-eeeecccchhhHHHHHH
Confidence            3567899999999999999999999887       89999999    666654321111110 0000110       011


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCC-----H---HHHHH----HHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNME-----R---SELLA----INSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~-----~---~~~~~----~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      -+.+...+-+++|..||..+..+.+     .   .+-+.    .-+.....+.+.+.+.  |+|.||++|
T Consensus        71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVS  138 (245)
T COG3967          71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVS  138 (245)
T ss_pred             HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEec
Confidence            1233456779999999987754321     1   11122    2344566677777773  799999997

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.27  E-value=0.01  Score=54.46  Aligned_cols=75  Identities=9%  Similarity=0.088  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..++.|+|| |.+|.+++..|...|.-      +|.+++++    .++++..+.++.... . ...+....+..+.+.++
T Consensus       125 ~k~vlvlGa-GGaarai~~aL~~~G~~------~i~I~nRt----~~ka~~La~~~~~~~-~-~~~~~~~~~~~~~~~~~  191 (282)
T TIGR01809       125 GFRGLVIGA-GGTSRAAVYALASLGVT------DITVINRN----PDKLSRLVDLGVQVG-V-ITRLEGDSGGLAIEKAA  191 (282)
T ss_pred             CceEEEEcC-cHHHHHHHHHHHHcCCC------eEEEEeCC----HHHHHHHHHHhhhcC-c-ceeccchhhhhhcccCC
Confidence            468999999 99999999999988863      79999998    566665544443211 0 00111002233566889


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |+||.+..
T Consensus       192 DiVInaTp  199 (282)
T TIGR01809       192 EVLVSTVP  199 (282)
T ss_pred             CEEEECCC
Confidence            99999743

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.27  E-value=0.0093  Score=54.46  Aligned_cols=68  Identities=19%  Similarity=0.227  Sum_probs=44.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      ++||+|||. |.+|..++..|...  +.       +|. ++|++    .++.+..+..+.        .....++..+.+
T Consensus         6 ~irIGIIG~-G~IG~~~a~~L~~~~~~~-------el~aV~dr~----~~~a~~~a~~~g--------~~~~~~~~eell   65 (271)
T PRK13302          6 ELRVAIAGL-GAIGKAIAQALDRGLPGL-------TLSAVAVRD----PQRHADFIWGLR--------RPPPVVPLDQLA   65 (271)
T ss_pred             eeEEEEECc-cHHHHHHHHHHHhcCCCe-------EEEEEECCC----HHHHHHHHHhcC--------CCcccCCHHHHh
Confidence            489999998 99999999988764  33       565 78888    444332221111        011224556667


Q ss_pred             CCccEEEEeCC
Q psy9582          82 KDANIAILIGS   92 (329)
Q Consensus        82 ~~aDiVi~~~g   92 (329)
                      .++|+|+++++
T Consensus        66 ~~~D~Vvi~tp   76 (271)
T PRK13302         66 THADIVVEAAP   76 (271)
T ss_pred             cCCCEEEECCC
Confidence            88999999854

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.021  Score=58.51  Aligned_cols=116  Identities=15%  Similarity=0.090  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a-   80 (329)
                      .+++.|+||+|++|.+++..|+..|.       +|.+++++    .+.++....++.......   ..++.-..+..++ 
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  439 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARN----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTV  439 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            35899999999999999999999887       89999998    444443333332211000   0011101111122 


Q ss_pred             ------cCCccEEEEeCCCCCCCC--------CCHHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEc
Q psy9582          81 ------FKDANIAILIGSFPRKSN--------MERSELLAINSSIFI----EQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~g--------~~~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~t  133 (329)
                            +...|++|+.+|......        .+....+..|+....    .+.+.+++.  ..+.||++|
T Consensus       440 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~is  508 (657)
T PRK07201        440 KDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER--RFGHVVNVS  508 (657)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCEEEEEC
Confidence                  236899999988642111        112234556655443    444445543  345666665

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.26  E-value=0.021  Score=55.03  Aligned_cols=91  Identities=16%  Similarity=0.120  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+|+|+|. |.+|..++..+...|.       +|..+|.+    ..+.....+   +   .+    .. .+..+++++
T Consensus       194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga-------~ViV~d~d----p~r~~~A~~---~---G~----~v-~~leeal~~  250 (406)
T TIGR00936       194 AGKTVVVAGY-GWCGKGIAMRARGMGA-------RVIVTEVD----PIRALEAAM---D---GF----RV-MTMEEAAKI  250 (406)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHhhCcC-------EEEEEeCC----hhhHHHHHh---c---CC----Ee-CCHHHHHhc
Confidence            3579999999 9999999999998876       89999998    333221111   1   11    11 123568899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +|+||.+.|.+               .++..  +.+... ++.+++++++-+
T Consensus       251 aDVVItaTG~~---------------~vI~~--~~~~~m-K~GailiN~G~~  284 (406)
T TIGR00936       251 GDIFITATGNK---------------DVIRG--EHFENM-KDGAIVANIGHF  284 (406)
T ss_pred             CCEEEECCCCH---------------HHHHH--HHHhcC-CCCcEEEEECCC
Confidence            99998875432               22221  122332 477899998754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.019  Score=50.25  Aligned_cols=112  Identities=11%  Similarity=0.071  Sum_probs=62.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc---ccC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT---AFK   82 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~---al~   82 (329)
                      ++.|+||+|.+|++++..|++.|.       +|+++|++    .+.++.    +....... ..++.-..+..+   .+.
T Consensus         3 ~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~----~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~~   67 (222)
T PRK06953          3 TVLIVGASRGIGREFVRQYRADGW-------RVIATARD----AAALAA----LQALGAEALALDVADPASVAGLAWKLD   67 (222)
T ss_pred             eEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECC----HHHHHH----HHhccceEEEecCCCHHHHHHHHHHhc
Confidence            699999999999999999998886       89999988    333321    11110000 001111111111   122


Q ss_pred             --CccEEEEeCCCCC--C-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEc
Q psy9582          83 --DANIAILIGSFPR--K-S--NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVG  133 (329)
Q Consensus        83 --~aDiVi~~~g~~~--~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~t  133 (329)
                        ..|+||+++|...  . +  ..+   ....+..|+.....+.+.+.++.. ..+.+++++
T Consensus        68 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~is  129 (222)
T PRK06953         68 GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLS  129 (222)
T ss_pred             CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEc
Confidence              4799999888642  1 1  112   234566777766666665554321 123444444

>PLN02494 adenosylhomocysteinase

Probab=96.25  E-value=0.02  Score=55.92  Aligned_cols=90  Identities=12%  Similarity=0.103  Sum_probs=59.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|+|. |.+|..+|..+...|.       +|+.+|++    ..+.. .+..  +   .+    .. .+..++++++
T Consensus       254 GKtVvViGy-G~IGr~vA~~aka~Ga-------~VIV~e~d----p~r~~-eA~~--~---G~----~v-v~leEal~~A  310 (477)
T PLN02494        254 GKVAVICGY-GDVGKGCAAAMKAAGA-------RVIVTEID----PICAL-QALM--E---GY----QV-LTLEDVVSEA  310 (477)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----chhhH-HHHh--c---CC----ee-ccHHHHHhhC
Confidence            579999999 9999999999987776       89999998    33221 1111  1   11    11 1345788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+||.+.|...               ++.  .+.+... ++++++++++-+
T Consensus       311 DVVI~tTGt~~---------------vI~--~e~L~~M-K~GAiLiNvGr~  343 (477)
T PLN02494        311 DIFVTTTGNKD---------------IIM--VDHMRKM-KNNAIVCNIGHF  343 (477)
T ss_pred             CEEEECCCCcc---------------chH--HHHHhcC-CCCCEEEEcCCC
Confidence            99998755421               111  2333433 578999999975

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.25  E-value=0.0091  Score=57.79  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||.|+|+ |.+|..++..|...|.-      +|++++++    .++++..+..+...      .+....++.+.+.++
T Consensus       181 ~kkvlviGa-G~~a~~va~~L~~~g~~------~I~V~nRt----~~ra~~La~~~~~~------~~~~~~~l~~~l~~a  243 (414)
T PRK13940        181 SKNVLIIGA-GQTGELLFRHVTALAPK------QIMLANRT----IEKAQKITSAFRNA------SAHYLSELPQLIKKA  243 (414)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCC------EEEEECCC----HHHHHHHHHHhcCC------eEecHHHHHHHhccC
Confidence            479999999 99999999999988763      79999998    55554443333210      111224557889999


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.+.|.
T Consensus       244 DiVI~aT~a~~  254 (414)
T PRK13940        244 DIIIAAVNVLE  254 (414)
T ss_pred             CEEEECcCCCC
Confidence            99999866654

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=96.25  E-value=0.013  Score=54.81  Aligned_cols=73  Identities=12%  Similarity=0.124  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ...++|||+ |..+...+..+..---+.     +|++||++    .+..+..+.+++...   ...+....+.++++++|
T Consensus       130 a~~laiIGa-G~qA~~ql~a~~~v~~~~-----~I~i~~r~----~~~~e~~a~~l~~~~---~~~v~a~~s~~~av~~a  196 (330)
T COG2423         130 ASTLAIIGA-GAQARTQLEALKAVRDIR-----EIRVYSRD----PEAAEAFAARLRKRG---GEAVGAADSAEEAVEGA  196 (330)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHhhCCcc-----EEEEEcCC----HHHHHHHHHHHHhhc---CccceeccCHHHHhhcC
Confidence            467999998 998888777776532233     99999999    666776666666532   22466667789999999


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+|+.+
T Consensus       197 DiIvt~  202 (330)
T COG2423         197 DIVVTA  202 (330)
T ss_pred             CEEEEe
Confidence            999986

>PRK12743 oxidoreductase; Provisional

Probab=96.25  E-value=0.099  Score=46.74  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=28.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++.|+||+|.+|.+++..|++.|.       +|.+.+..
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~   35 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGF-------DIGITWHS   35 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            3799999999999999999999987       78887654

>PLN02928 oxidoreductase family protein

Probab=96.24  E-value=0.015  Score=54.94  Aligned_cols=104  Identities=17%  Similarity=0.146  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~~~i~~~~~~~~al~~   83 (329)
                      .++|+|+|. |.||+.+|..|..-|.       +|..+|+..    .........+..... ..........++.+.++.
T Consensus       159 gktvGIiG~-G~IG~~vA~~l~afG~-------~V~~~dr~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~  226 (347)
T PLN02928        159 GKTVFILGY-GAIGIELAKRLRPFGV-------KLLATRRSW----TSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGE  226 (347)
T ss_pred             CCEEEEECC-CHHHHHHHHHHhhCCC-------EEEEECCCC----ChhhhhhhccccccccccccccCcccCHHHHHhh
Confidence            479999999 9999999999998787       899999861    111100000000000 000000012467889999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ||+|+++....  +         .+..++-  .+.+... +|++++||++-
T Consensus       227 aDiVvl~lPlt--~---------~T~~li~--~~~l~~M-k~ga~lINvaR  263 (347)
T PLN02928        227 ADIVVLCCTLT--K---------ETAGIVN--DEFLSSM-KKGALLVNIAR  263 (347)
T ss_pred             CCEEEECCCCC--h---------HhhcccC--HHHHhcC-CCCeEEEECCC
Confidence            99999974221  1         0111111  2444444 58999999984

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.24  E-value=0.022  Score=49.99  Aligned_cols=34  Identities=32%  Similarity=0.615  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|+|+ |.+|+.++..|+..|. +     +++++|.+
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gv-g-----~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGV-G-----NLKLVDFD   61 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence            468999998 9999999999999987 3     79999988

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.23  E-value=0.011  Score=55.54  Aligned_cols=75  Identities=21%  Similarity=0.383  Sum_probs=45.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+|+||+|.+|.-+...|.+.++-.    .+|+.+-..+    .  .|....+..      ..+.+.....+++
T Consensus         1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~----~~l~~v~s~~----~--aG~~l~~~~------~~l~~~~~~~~~~   64 (336)
T PRK05671          1 MSQPLDIAVVGATGTVGEALVQILEERDFPV----GTLHLLASSE----S--AGHSVPFAG------KNLRVREVDSFDF   64 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhhCCCCc----eEEEEEECcc----c--CCCeeccCC------cceEEeeCChHHh
Confidence            4455899999999999999999999654311    1777775541    1  122112211      1233322222347


Q ss_pred             CCccEEEEeCC
Q psy9582          82 KDANIAILIGS   92 (329)
Q Consensus        82 ~~aDiVi~~~g   92 (329)
                      +++|+||++.+
T Consensus        65 ~~vD~vFla~p   75 (336)
T PRK05671         65 SQVQLAFFAAG   75 (336)
T ss_pred             cCCCEEEEcCC
Confidence            89999999743

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.048  Score=48.97  Aligned_cols=34  Identities=21%  Similarity=0.178  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCC-chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAG-QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G-~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+| .+|..++..|+..|.       +|.+.|++
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~   51 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIH   51 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            46899999987 799999999999887       89999988

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.22  E-value=0.019  Score=55.91  Aligned_cols=106  Identities=13%  Similarity=0.200  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+|+|+|+ |.+|..++..|...|..      +|+++|++    .+++...+.++.     .  .+....+..+++.+
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~------~V~v~~r~----~~ra~~la~~~g-----~--~~~~~~~~~~~l~~  242 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVR------KITVANRT----LERAEELAEEFG-----G--EAIPLDELPEALAE  242 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCC------eEEEEeCC----HHHHHHHHHHcC-----C--cEeeHHHHHHHhcc
Confidence            3479999998 99999999999877652      79999998    544443333221     0  11111345677899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      +|+||.+.+.+..- .+.        ..++..   +..-.....+++-+++|-|+=
T Consensus       243 aDvVI~aT~s~~~~-i~~--------~~l~~~---~~~~~~~~~vviDla~Prdid  286 (423)
T PRK00045        243 ADIVISSTGAPHPI-IGK--------GMVERA---LKARRHRPLLLVDLAVPRDIE  286 (423)
T ss_pred             CCEEEECCCCCCcE-EcH--------HHHHHH---HhhccCCCeEEEEeCCCCCCc
Confidence            99999986554310 111        111111   111102457888999998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.22  E-value=0.021  Score=50.65  Aligned_cols=31  Identities=23%  Similarity=0.214  Sum_probs=27.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEe
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLE   43 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D   43 (329)
                      +.+.|+||+|.+|..++..|++.|.       ++++..
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~-------~vv~~~   34 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGF-------KVVAGC   34 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCC-------EEEEEc
Confidence            5789999999999999999999987       777754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.21  E-value=0.026  Score=50.66  Aligned_cols=34  Identities=18%  Similarity=0.207  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|.+|.+++..|+..|.       .+++..++
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~   40 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRS   40 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            47899999999999999999999886       78887765

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.21  E-value=0.023  Score=54.88  Aligned_cols=90  Identities=12%  Similarity=0.080  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|+|+ |.+|..++..+...|.       +|.++|++    +.++. .+..+     .+    .. ....++++++
T Consensus       202 GktVvViG~-G~IG~~va~~ak~~Ga-------~ViV~d~d----~~R~~-~A~~~-----G~----~~-~~~~e~v~~a  258 (413)
T cd00401         202 GKVAVVAGY-GDVGKGCAQSLRGQGA-------RVIVTEVD----PICAL-QAAME-----GY----EV-MTMEEAVKEG  258 (413)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEECC----hhhHH-HHHhc-----CC----EE-ccHHHHHcCC
Confidence            469999999 9999999999998887       78999998    44443 22111     11    11 1234678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+||.+.|.+               ..+..  ..+... ++.+++++++.+
T Consensus       259 DVVI~atG~~---------------~~i~~--~~l~~m-k~GgilvnvG~~  291 (413)
T cd00401         259 DIFVTTTGNK---------------DIITG--EHFEQM-KDGAIVCNIGHF  291 (413)
T ss_pred             CEEEECCCCH---------------HHHHH--HHHhcC-CCCcEEEEeCCC
Confidence            9999886532               12211  113333 478899999864

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.20  E-value=0.024  Score=51.67  Aligned_cols=72  Identities=11%  Similarity=0.135  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+++.|+|+ |.+|.+++..|+..+.       +|.++|++    .++++..+.++....     .+.........+.++
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~-------~v~v~~R~----~~~~~~la~~~~~~~-----~~~~~~~~~~~~~~~  179 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADC-------NVIIANRT----VSKAEELAERFQRYG-----EIQAFSMDELPLHRV  179 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHhhcC-----ceEEechhhhcccCc
Confidence            468999999 9999999999998875       89999998    555554444433211     111111112345689


Q ss_pred             cEEEEeCCC
Q psy9582          85 NIAILIGSF   93 (329)
Q Consensus        85 DiVi~~~g~   93 (329)
                      |+||.+.+.
T Consensus       180 DivInatp~  188 (270)
T TIGR00507       180 DLIINATSA  188 (270)
T ss_pred             cEEEECCCC
Confidence            999998554

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.20  E-value=0.028  Score=58.06  Aligned_cols=34  Identities=26%  Similarity=0.279  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~  447 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLN  447 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCC
Confidence            36899999999999999999999887       89999998

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.13  E-value=0.016  Score=55.55  Aligned_cols=35  Identities=26%  Similarity=0.314  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++||+|+||+|.+|..+...|.....+      +|+++..+
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~------el~~l~s~   72 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDF------EITVMTAD   72 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCC------eEEEEECh
Confidence            469999999999999999999888543      89998775

>PRK06720 hypothetical protein; Provisional

Probab=96.13  E-value=0.073  Score=44.96  Aligned_cols=35  Identities=17%  Similarity=0.145  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.+.|+||+|.+|..++..|.+.|.       +|.++|++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~   49 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDID   49 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence            346889999988999999999999886       89999987

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.13  E-value=0.018  Score=56.29  Aligned_cols=91  Identities=12%  Similarity=0.083  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..++++|+|. |.+|..+|..+...|.       +|..+|++    ..+......   +   .    +.. .+..++++.
T Consensus       253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga-------~ViV~e~d----p~~a~~A~~---~---G----~~~-~~leell~~  309 (476)
T PTZ00075        253 AGKTVVVCGY-GDVGKGCAQALRGFGA-------RVVVTEID----PICALQAAM---E---G----YQV-VTLEDVVET  309 (476)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----chhHHHHHh---c---C----cee-ccHHHHHhc
Confidence            3579999998 9999999999998887       89999887    332211111   1   1    111 235678999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ||+|+.+.|.+.               ++.  .+.+... +|.+++++++-.
T Consensus       310 ADIVI~atGt~~---------------iI~--~e~~~~M-KpGAiLINvGr~  343 (476)
T PTZ00075        310 ADIFVTATGNKD---------------IIT--LEHMRRM-KNNAIVGNIGHF  343 (476)
T ss_pred             CCEEEECCCccc---------------ccC--HHHHhcc-CCCcEEEEcCCC
Confidence            999999754321               111  1334443 588999999855

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.11  E-value=0.047  Score=51.12  Aligned_cols=94  Identities=18%  Similarity=0.240  Sum_probs=57.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-ENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~~~al~~   83 (329)
                      ..+|+|+|+ |.+|..-++.+...+.       +|+.+|++    +++++ .+.+|-.   ...  +..+ .+..+++++
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga-------~Via~~~~----~~K~e-~a~~lGA---d~~--i~~~~~~~~~~~~~  228 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGA-------EVIAITRS----EEKLE-LAKKLGA---DHV--INSSDSDALEAVKE  228 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCC-------eEEEEeCC----hHHHH-HHHHhCC---cEE--EEcCCchhhHHhHh
Confidence            479999999 8888776666665674       99999999    55544 3333321   110  1111 223344443


Q ss_pred             -ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          84 -ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        84 -aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                       +|+||.+++ +.               -+....+.+    ++++.++.+++|-
T Consensus       229 ~~d~ii~tv~-~~---------------~~~~~l~~l----~~~G~~v~vG~~~  262 (339)
T COG1064         229 IADAIIDTVG-PA---------------TLEPSLKAL----RRGGTLVLVGLPG  262 (339)
T ss_pred             hCcEEEECCC-hh---------------hHHHHHHHH----hcCCEEEEECCCC
Confidence             999999865 22               223333333    3678999999994

>PTZ00317 NADP-dependent malic enzyme; Provisional

Probab=96.10  E-value=0.014  Score=57.74  Aligned_cols=123  Identities=12%  Similarity=0.101  Sum_probs=76.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh----CCCCCCCC-CceEEEEecCC--cccc-cchhhhHhhhhhcccCCccceEeecCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN----GDLLGKDQ-PIILQLLEASN--KKSQ-KAIKGVIMEIEDCIFPLLVDVSVHENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~----~~~~~~~~-~~ei~L~D~~~--~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~~   77 (329)
                      .||.+.|| |..|..+|..|+.    .|+- .++ .-.++++|.+-  -+.. +.+......+.+..  ....-....++
T Consensus       298 ~riv~~GA-GsAgiGia~ll~~~m~~~Gls-~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~--~~~~~~~~~~L  373 (559)
T PTZ00317        298 QRIVFFGA-GSAAIGVANNIADLAAEYGVT-REEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTD--ISAEDSSLKTL  373 (559)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHHHHHcCCC-hhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccc--cccccccCCCH
Confidence            69999999 9999999988874    5652 111 12899999861  0000 11111111221110  00000012578


Q ss_pred             ccccCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch---hhHHHHHHHHC
Q psy9582          78 ITAFKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV---NTNTYITMKSA  147 (329)
Q Consensus        78 ~~al~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~---~~~~~~~~~~~  147 (329)
                      .++++++  |++|=+.+.+.              -..+++.+.|.+++ ++.+|.-.|||.   .+...-+.+.+
T Consensus       374 ~e~v~~~KPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~-~rPIIFaLSNPt~~aE~tpeda~~~T  433 (559)
T PTZ00317        374 EDVVRFVKPTALLGLSGVGG--------------VFTEEVVKTMASNV-ERPIIFPLSNPTSKAECTAEDAYKWT  433 (559)
T ss_pred             HHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcC-CCCEEEECCCCCCCCCcCHHHHHhhc
Confidence            8999999  98886544332              25567888888887 889999999997   56666677765

>PLN00203 glutamyl-tRNA reductase

Probab=96.10  E-value=0.011  Score=58.72  Aligned_cols=74  Identities=14%  Similarity=0.239  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|||+ |.+|..++..|...|.-      +|++++++    .+++......+..    ....+....+..+++.++
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~------~V~V~nRs----~era~~La~~~~g----~~i~~~~~~dl~~al~~a  330 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCT------KMVVVNRS----EERVAALREEFPD----VEIIYKPLDEMLACAAEA  330 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCC------eEEEEeCC----HHHHHHHHHHhCC----CceEeecHhhHHHHHhcC
Confidence            479999999 99999999999987752      79999998    5555443322211    000111223556789999


Q ss_pred             cEEEEeCCC
Q psy9582          85 NIAILIGSF   93 (329)
Q Consensus        85 DiVi~~~g~   93 (329)
                      |+||.+.+.
T Consensus       331 DVVIsAT~s  339 (519)
T PLN00203        331 DVVFTSTSS  339 (519)
T ss_pred             CEEEEccCC
Confidence            999987443

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.09  E-value=0.019  Score=53.79  Aligned_cols=92  Identities=16%  Similarity=0.178  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++++|||. |.||+.++..+..-|.       +|..||....  ++ ..     ..+       .+....++.+-++.|
T Consensus       142 gkTvGIiG~-G~IG~~va~~l~afgm-------~v~~~d~~~~--~~-~~-----~~~-------~~~~~~~Ld~lL~~s  198 (324)
T COG0111         142 GKTVGIIGL-GRIGRAVAKRLKAFGM-------KVIGYDPYSP--RE-RA-----GVD-------GVVGVDSLDELLAEA  198 (324)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEECCCCc--hh-hh-----ccc-------cceecccHHHHHhhC
Confidence            479999999 9999999999999888       8999999510  11 11     001       122224578899999


Q ss_pred             cEEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGS-FPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g-~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |||++..- ++...|+       -|       ++.+.+. ++.+++||++-
T Consensus       199 Div~lh~PlT~eT~g~-------i~-------~~~~a~M-K~gailIN~aR  234 (324)
T COG0111         199 DILTLHLPLTPETRGL-------IN-------AEELAKM-KPGAILINAAR  234 (324)
T ss_pred             CEEEEcCCCCcchhcc-------cC-------HHHHhhC-CCCeEEEECCC
Confidence            99998632 2221111       01       1333443 57889999873

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.08  E-value=0.026  Score=54.71  Aligned_cols=91  Identities=11%  Similarity=0.110  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+|+|+|. |.+|..++..+...|.       +|.++|++    ..++.....+      ++    .. .+..+++++
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga-------~ViV~d~d----p~ra~~A~~~------G~----~v-~~l~eal~~  267 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGA-------RVIVTEVD----PICALQAAMD------GF----RV-MTMEEAAEL  267 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEcCC----chhhHHHHhc------CC----Ee-cCHHHHHhC
Confidence            3478999998 9999999999998887       89999998    3333211111      11    11 134678899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +|+||.+.|.+               .++..  +.+... ++.+++++++-+
T Consensus       268 aDVVI~aTG~~---------------~vI~~--~~~~~m-K~GailiNvG~~  301 (425)
T PRK05476        268 GDIFVTATGNK---------------DVITA--EHMEAM-KDGAILANIGHF  301 (425)
T ss_pred             CCEEEECCCCH---------------HHHHH--HHHhcC-CCCCEEEEcCCC
Confidence            99999875431               12221  223333 477899998754

>PLN02996 fatty acyl-CoA reductase

Probab=96.07  E-value=0.11  Score=51.58  Aligned_cols=112  Identities=14%  Similarity=0.117  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcc--cccchhhhH--hhhh----hcccC-C----ccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKK--SQKAIKGVI--MEIE----DCIFP-L----LVD   70 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~--~~~~~~~~~--~dl~----~~~~~-~----~~~   70 (329)
                      .+.|.|+||+|++|++++..|+.. .-.+     +|+++.+..+.  ..+++....  .++.    +.... +    ..+
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~-----~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k   85 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK   85 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCC-----EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence            478999999999999999988764 3333     78888876311  011111010  0110    00000 0    011


Q ss_pred             eEe-ecC-------------cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          71 VSV-HEN-------------PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        71 i~~-~~~-------------~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      +.. ..|             ..+.++++|+||++|+... ...+.......|+....++.+.+.+.
T Consensus        86 v~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~  150 (491)
T PLN02996         86 VTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC  150 (491)
T ss_pred             EEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            111 111             2345678999999987543 22345566788999999999888764

>PLN00016 RNA-binding protein; Provisional

Probab=96.07  E-value=0.042  Score=52.49  Aligned_cols=34  Identities=15%  Similarity=0.298  Sum_probs=31.5

Q ss_pred             CCEEEEE----cCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISIT----GAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~Ii----Ga~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++||.|+    ||+|++|++++..|++.|+       +|++++++
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~   89 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRG   89 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecC
Confidence            4689999    9999999999999999987       89999998

>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2

Probab=96.07  E-value=0.03  Score=46.84  Aligned_cols=78  Identities=13%  Similarity=0.129  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh-hcccCCccceEeecCccccc
Q psy9582           4 KPVRISITGA-AGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE-DCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa-~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~-~~~~~~~~~i~~~~~~~~al   81 (329)
                      +..||+++|= .+++..+++..+..-|.       +++++-...  ..-.......+.. +........++++.+..+++
T Consensus         1 ~gl~i~~vGD~~~rv~~Sl~~~~~~~g~-------~~~~~~P~~--~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~e~l   71 (158)
T PF00185_consen    1 KGLKIAYVGDGHNRVAHSLIELLAKFGM-------EVVLIAPEG--LRYPPDPEVLEKAKKNAKKNGGKITITDDIEEAL   71 (158)
T ss_dssp             TTEEEEEESSTTSHHHHHHHHHHHHTTS-------EEEEESSGG--GGGSHHHHHHHHHHHHHHHHTTEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCChHHHHHHHHHHHcCC-------EEEEECCCc--ccCCCCHHHHHHHHHHHHHhCCCeEEEeCHHHhc
Confidence            3579999995 47999999999998887       888887761  0000111112111 11101124688888988999


Q ss_pred             CCccEEEEe
Q psy9582          82 KDANIAILI   90 (329)
Q Consensus        82 ~~aDiVi~~   90 (329)
                      ++||+|+..
T Consensus        72 ~~aDvvy~~   80 (158)
T PF00185_consen   72 KGADVVYTD   80 (158)
T ss_dssp             TT-SEEEEE
T ss_pred             CCCCEEEEc
Confidence            999999886

1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.07  E-value=0.0032  Score=60.41  Aligned_cols=75  Identities=16%  Similarity=0.206  Sum_probs=45.7

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccccCCcc
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITAFKDAN   85 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~al~~aD   85 (329)
                      |.|+|| |.+|+.++..|++..-..     +|++.|++    .++++.....+....... ..+.+.  .++.+.++++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~-----~v~va~r~----~~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFE-----EVTVADRN----PEKAERLAEKLLGDRVEA-VQVDVNDPESLAELLRGCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE------EEEEEESS----HHHHHHHHT--TTTTEEE-EE--TTTHHHHHHHHTTSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCC-----cEEEEECC----HHHHHHHHhhccccceeE-EEEecCCHHHHHHHHhcCC
Confidence            789999 999999999999886543     79999999    666554433221110000 111111  12456799999


Q ss_pred             EEEEeCCC
Q psy9582          86 IAILIGSF   93 (329)
Q Consensus        86 iVi~~~g~   93 (329)
                      +||.+++.
T Consensus        70 vVin~~gp   77 (386)
T PF03435_consen   70 VVINCAGP   77 (386)
T ss_dssp             EEEE-SSG
T ss_pred             EEEECCcc
Confidence            99998764

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.06  E-value=0.046  Score=44.62  Aligned_cols=32  Identities=25%  Similarity=0.586  Sum_probs=29.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+|+|+ |.+|+.++..|+..|. +     +++++|.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv-~-----~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV-G-----KITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-C-----EEEEEcCC
Confidence            6899998 9999999999999987 3     89999987

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.06  E-value=0.024  Score=52.55  Aligned_cols=92  Identities=16%  Similarity=0.264  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|- |.||+.+|..+...|.       +|..||+.    ... .+    ..    .      ...++.+.++.|
T Consensus       122 gktvgIiG~-G~IG~~vA~~l~afG~-------~V~~~~r~----~~~-~~----~~----~------~~~~l~ell~~a  174 (303)
T PRK06436        122 NKSLGILGY-GGIGRRVALLAKAFGM-------NIYAYTRS----YVN-DG----IS----S------IYMEPEDIMKKS  174 (303)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCC----Ccc-cC----cc----c------ccCCHHHHHhhC
Confidence            479999998 9999999987776676       89999987    211 10    00    0      013567889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc--Cchh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG--NPVN  137 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t--NP~~  137 (329)
                      |+|+++.....  . ++        .++-  .+.+... +|++++|+++  .++|
T Consensus       175 Div~~~lp~t~--~-T~--------~li~--~~~l~~m-k~ga~lIN~sRG~~vd  215 (303)
T PRK06436        175 DFVLISLPLTD--E-TR--------GMIN--SKMLSLF-RKGLAIINVARADVVD  215 (303)
T ss_pred             CEEEECCCCCc--h-hh--------cCcC--HHHHhcC-CCCeEEEECCCccccC
Confidence            99999733211  0 11        1110  2344443 5889999997  4454

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.03  Score=49.60  Aligned_cols=33  Identities=24%  Similarity=0.156  Sum_probs=28.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+.|+||+|.+|++++..|+..|.       .+++.+.+
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~   35 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGY-------AVCLNYLR   35 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-------eEEEecCC
Confidence            3699999999999999999999886       77777754

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=96.04  E-value=0.046  Score=45.62  Aligned_cols=64  Identities=19%  Similarity=0.230  Sum_probs=40.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||- |+-|.+.|..|...|+       +|.+-.+....+.++++      .+   .    +++ .+..|+.+.|
T Consensus         4 ~k~IAViGy-GsQG~a~AlNLrDSG~-------~V~Vglr~~s~s~~~A~------~~---G----f~v-~~~~eAv~~a   61 (165)
T PF07991_consen    4 GKTIAVIGY-GSQGHAHALNLRDSGV-------NVIVGLREGSASWEKAK------AD---G----FEV-MSVAEAVKKA   61 (165)
T ss_dssp             TSEEEEES--SHHHHHHHHHHHHCC--------EEEEEE-TTCHHHHHHH------HT---T-----EC-CEHHHHHHC-
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCC-------CEEEEecCCCcCHHHHH------HC---C----Cee-ccHHHHHhhC
Confidence            579999999 9999999999999998       88877776211111111      11   1    222 2457899999


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+|+++
T Consensus        62 DvV~~L   67 (165)
T PF07991_consen   62 DVVMLL   67 (165)
T ss_dssp             SEEEE-
T ss_pred             CEEEEe
Confidence            999997

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.04  E-value=0.016  Score=49.01  Aligned_cols=54  Identities=17%  Similarity=0.255  Sum_probs=42.6

Q ss_pred             CCEEEEEcCCCc-hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQ-IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~-vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..||.|+|+ |. +|..++..|...+.       +|++.+++    .                        .++.+.+++
T Consensus        44 gk~vlViG~-G~~~G~~~a~~L~~~g~-------~V~v~~r~----~------------------------~~l~~~l~~   87 (168)
T cd01080          44 GKKVVVVGR-SNIVGKPLAALLLNRNA-------TVTVCHSK----T------------------------KNLKEHTKQ   87 (168)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhhCCC-------EEEEEECC----c------------------------hhHHHHHhh
Confidence            479999999 86 58889999998876       78888876    2                        134567889


Q ss_pred             ccEEEEeCCCC
Q psy9582          84 ANIAILIGSFP   94 (329)
Q Consensus        84 aDiVi~~~g~~   94 (329)
                      ||+||.+.+.|
T Consensus        88 aDiVIsat~~~   98 (168)
T cd01080          88 ADIVIVAVGKP   98 (168)
T ss_pred             CCEEEEcCCCC
Confidence            99999886654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=96.04  E-value=0.026  Score=49.73  Aligned_cols=76  Identities=13%  Similarity=0.161  Sum_probs=43.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc--cchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ--KAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~--~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      |++.|+||+|++|.+++..|++.+.-     ..+.+.+++.....  .++.....|+.+..     .+   ....+.+..
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~-----~~---~~~~~~~~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPD-----ATVHATYRHHKPDFQHDNVQWHALDVTDEA-----EI---KQLSEQFTQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCC-----CEEEEEccCCccccccCceEEEEecCCCHH-----HH---HHHHHhcCC
Confidence            47999999999999999999987431     15666666521100  00001112222110     00   012345678


Q ss_pred             ccEEEEeCCCC
Q psy9582          84 ANIAILIGSFP   94 (329)
Q Consensus        84 aDiVi~~~g~~   94 (329)
                      .|++|+++|..
T Consensus        68 id~li~~aG~~   78 (235)
T PRK09009         68 LDWLINCVGML   78 (235)
T ss_pred             CCEEEECCccc
Confidence            89999998865

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.03  E-value=0.025  Score=55.34  Aligned_cols=117  Identities=18%  Similarity=0.196  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--C------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--N------   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~------   76 (329)
                      ..++.|+||+|.+|..++..|+..|.       +|+++|+..  ..+.+.....++..   .. ..+.++.  +      
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~--~~~~l~~~~~~~~~---~~-~~~Dv~~~~~~~~~~~  276 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPA--AGEALAAVANRVGG---TA-LALDITAPDAPARIAE  276 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCc--cHHHHHHHHHHcCC---eE-EEEeCCCHHHHHHHHH
Confidence            36899999999999999999999887       899998851  12222222111110   00 0111111  0      


Q ss_pred             -cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh--hcCCCeEEEEEcC
Q psy9582          77 -PITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNS--VASRDVKVLVVGN  134 (329)
Q Consensus        77 -~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~--~~~p~a~viv~tN  134 (329)
                       ..+.....|+||+++|.....   ..+   ....+..|+.....+.+.+.+  ...+.+.|+++|-
T Consensus       277 ~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        277 HLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence             011123579999998865321   122   334556777777777766655  2224466777663

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.03  E-value=0.019  Score=50.77  Aligned_cols=93  Identities=13%  Similarity=0.124  Sum_probs=56.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCccE
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDANI   86 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~aDi   86 (329)
                      |+|+||+|.+|++++..|++.+.       +|+++=++    ...  .....+++..... ..++.-...+.++++|+|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~----~~~--~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRD----PSS--DRAQQLQALGAEVVEADYDDPESLVAALKGVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESS----SHH--HHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-------CcEEEEec----cch--hhhhhhhcccceEeecccCCHHHHHHHHcCCce
Confidence            79999999999999999999765       78888887    211  1122233221110 0111112345778999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      ||++.+...   ...       .+....+++..++..
T Consensus        68 v~~~~~~~~---~~~-------~~~~~~li~Aa~~ag   94 (233)
T PF05368_consen   68 VFSVTPPSH---PSE-------LEQQKNLIDAAKAAG   94 (233)
T ss_dssp             EEEESSCSC---CCH-------HHHHHHHHHHHHHHT
T ss_pred             EEeecCcch---hhh-------hhhhhhHHHhhhccc
Confidence            998755332   111       234555666666653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.048  Score=50.60  Aligned_cols=38  Identities=18%  Similarity=0.213  Sum_probs=32.8

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||.+  .+.+.|+||++.+|.+++..|+..|.       .|++.+++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~   41 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRS   41 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence            5543  46889999999999999999999887       89999987

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.01  E-value=0.043  Score=47.82  Aligned_cols=34  Identities=21%  Similarity=0.449  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||.|+|+ |.+|+.++..|+..|. +     +|+++|.+
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv-~-----~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGV-G-----TIVIVDDD   54 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence            479999998 9999999999999986 3     89999987

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06046 alanine dehydrogenase; Validated

Probab=96.00  E-value=0.022  Score=53.46  Aligned_cols=74  Identities=15%  Similarity=0.212  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+|+|||+ |..|...+..+....-+.     ++.++|++    .++++..+.++.+.   +...+....+..+++. 
T Consensus       128 ~~~~vgiiG~-G~qa~~h~~al~~~~~i~-----~v~v~~r~----~~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~-  193 (326)
T PRK06046        128 DSKVVGIIGA-GNQARTQLLALSEVFDLE-----EVRVYDRT----KSSAEKFVERMSSV---VGCDVTVAEDIEEACD-  193 (326)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhhCCce-----EEEEECCC----HHHHHHHHHHHHhh---cCceEEEeCCHHHHhh-
Confidence            3578999998 999999888787543344     89999999    55565555445432   1123555566677776 


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      +|+|+++.
T Consensus       194 aDiVv~aT  201 (326)
T PRK06046        194 CDILVTTT  201 (326)
T ss_pred             CCEEEEec
Confidence            99999873

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.97  E-value=0.027  Score=50.68  Aligned_cols=34  Identities=15%  Similarity=0.020  Sum_probs=29.5

Q ss_pred             CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+.|+||+  +.+|..++..|++.|.       +|++.|++
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~   45 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLN   45 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            4678899996  3899999999999887       89999987

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.97  E-value=0.026  Score=49.14  Aligned_cols=33  Identities=15%  Similarity=0.388  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|+|+|. |++|++++..|...|.       +|+++|++
T Consensus        28 gk~v~I~G~-G~vG~~~A~~L~~~G~-------~Vvv~D~~   60 (200)
T cd01075          28 GKTVAVQGL-GKVGYKLAEHLLEEGA-------KLIVADIN   60 (200)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEcCC
Confidence            478999999 9999999999999987       89999998

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.95  E-value=0.06  Score=48.92  Aligned_cols=35  Identities=23%  Similarity=0.210  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.+.|+||++  .+|.++|..|++.|.       .|++.+++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~   42 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQG   42 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCc
Confidence            446799999965  899999999999987       89999876

>PLN02858 fructose-bisphosphate aldolase

Probab=95.94  E-value=0.035  Score=61.47  Aligned_cols=66  Identities=14%  Similarity=0.281  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|++||. |.||.+++..|+..|.       +|..||++    .++++.    +.+..      .....+..+++++|
T Consensus       324 ~~~IGfIGl-G~MG~~mA~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~G------a~~~~s~~e~~~~a  381 (1378)
T PLN02858        324 VKRIGFIGL-GAMGFGMASHLLKSNF-------SVCGYDVY----KPTLVR----FENAG------GLAGNSPAEVAKDV  381 (1378)
T ss_pred             CCeEEEECc-hHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH----HHHcC------CeecCCHHHHHhcC
Confidence            379999998 9999999999999987       89999998    444332    22211      11234556788999


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |+||++..
T Consensus       382 DvVi~~V~  389 (1378)
T PLN02858        382 DVLVIMVA  389 (1378)
T ss_pred             CEEEEecC
Confidence            99999743

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.94  E-value=0.07  Score=44.56  Aligned_cols=65  Identities=15%  Similarity=0.189  Sum_probs=42.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|.|+|| |.+|...+..|+..|.       +|++++..      ..+ ...++...      .+....-..+.++++
T Consensus        13 ~~~vlVvGG-G~va~rka~~Ll~~ga-------~V~VIsp~------~~~-~l~~l~~i------~~~~~~~~~~dl~~a   71 (157)
T PRK06719         13 NKVVVIIGG-GKIAYRKASGLKDTGA-------FVTVVSPE------ICK-EMKELPYI------TWKQKTFSNDDIKDA   71 (157)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEcCc------cCH-HHHhccCc------EEEecccChhcCCCc
Confidence            479999999 9999999999999887       89999654      111 11122110      111111124568999


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+||.+
T Consensus        72 ~lViaa   77 (157)
T PRK06719         72 HLIYAA   77 (157)
T ss_pred             eEEEEC
Confidence            999986

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.91  E-value=0.028  Score=49.86  Aligned_cols=34  Identities=26%  Similarity=0.446  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|+|+ |.+|+.++..|+..|. +     +++|+|.+
T Consensus        21 ~~~VlivG~-GglGs~va~~La~~Gv-g-----~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGA-GGLGSPAAEYLAAAGV-G-----KLGLVDDD   54 (228)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-C-----EEEEEcCC
Confidence            369999998 9999999999999987 3     89999977

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=95.89  E-value=0.026  Score=53.98  Aligned_cols=60  Identities=8%  Similarity=0.131  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |+||+.++..+...|.       +|..+|..    .....       ..       .. ..++.+.+++|
T Consensus       116 gktvGIIG~-G~IG~~va~~l~a~G~-------~V~~~Dp~----~~~~~-------~~-------~~-~~~l~ell~~a  168 (381)
T PRK00257        116 ERTYGVVGA-GHVGGRLVRVLRGLGW-------KVLVCDPP----RQEAE-------GD-------GD-FVSLERILEEC  168 (381)
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEECCc----ccccc-------cC-------cc-ccCHHHHHhhC
Confidence            478999999 9999999999998887       89999986    21111       00       00 12467788999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|++..
T Consensus       169 DiV~lh~  175 (381)
T PRK00257        169 DVISLHT  175 (381)
T ss_pred             CEEEEeC
Confidence            9999863

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.89  E-value=0.03  Score=52.78  Aligned_cols=34  Identities=21%  Similarity=0.363  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|||+ |.+|++++..|+..|+ +     +|+|+|.+
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGv-g-----~i~lvD~D   57 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGI-G-----KLTIADRD   57 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-C-----EEEEEcCC
Confidence            368999999 9999999999999986 3     89999987

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.89  E-value=0.12  Score=45.51  Aligned_cols=31  Identities=26%  Similarity=0.264  Sum_probs=27.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA   44 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~   44 (329)
                      .+.|+||+|.+|..++..|+..|.       ++++..+
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r   32 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGY-------RVAANCG   32 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-------EEEEEeC
Confidence            578999999999999999999887       7888877

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.87  E-value=0.024  Score=52.67  Aligned_cols=117  Identities=10%  Similarity=0.054  Sum_probs=64.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--c-cceEeec------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--L-VDVSVHE------   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~-~~i~~~~------   75 (329)
                      +.+.|+||++.+|.+++..|+..| .       .|++.+++    .++++....++.......  . .++.-..      
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEW-------HVIMACRD----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCC----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence            479999999999999999999988 6       89999988    343332222232110000  0 0110000      


Q ss_pred             -CcccccCCccEEEEeCCCCCC----CCCCH---HHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 -NPITAFKDANIAILIGSFPRK----SNMER---SELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 -~~~~al~~aDiVi~~~g~~~~----~g~~~---~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                       ...+.....|++|..+|....    +..+.   ...+..|..    .++.+.+.+.+.....+.||++|
T Consensus        73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vs  142 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVG  142 (314)
T ss_pred             HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence             111123568999999886321    11222   233455554    45556666665421135666654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.85  E-value=0.019  Score=55.09  Aligned_cols=73  Identities=15%  Similarity=0.280  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..|+.|||| |-||.-.+..|...|..      +|++.++.    .++++..+..+.       ..+.--.++.+.+.++
T Consensus       178 ~~~vlvIGA-Gem~~lva~~L~~~g~~------~i~IaNRT----~erA~~La~~~~-------~~~~~l~el~~~l~~~  239 (414)
T COG0373         178 DKKVLVIGA-GEMGELVAKHLAEKGVK------KITIANRT----LERAEELAKKLG-------AEAVALEELLEALAEA  239 (414)
T ss_pred             cCeEEEEcc-cHHHHHHHHHHHhCCCC------EEEEEcCC----HHHHHHHHHHhC-------CeeecHHHHHHhhhhC
Confidence            468999999 99999999999999874      89999998    666655554443       1122224567899999


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.+.|.
T Consensus       240 DvVissTsa~~  250 (414)
T COG0373         240 DVVISSTSAPH  250 (414)
T ss_pred             CEEEEecCCCc
Confidence            99999866554

>PLN02306 hydroxypyruvate reductase

Probab=95.83  E-value=0.041  Score=52.82  Aligned_cols=105  Identities=10%  Similarity=0.104  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh---cccCCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED---CIFPLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~---~~~~~~~~i~~~~~~~~a   80 (329)
                      .++|+|+|. |.||+.+|..+. .-|.       +|..||...   .............   ........+....++.+.
T Consensus       165 gktvGIiG~-G~IG~~vA~~l~~~fGm-------~V~~~d~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~el  233 (386)
T PLN02306        165 GQTVGVIGA-GRIGSAYARMMVEGFKM-------NLIYYDLYQ---STRLEKFVTAYGQFLKANGEQPVTWKRASSMEEV  233 (386)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC-------EEEEECCCC---chhhhhhhhhhcccccccccccccccccCCHHHH
Confidence            479999999 999999999885 4565       899999872   1111100000000   000000112223467889


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++.||+|++......   .++        .++-  .+.++.. +|++++||++-
T Consensus       234 l~~sDiV~lh~Plt~---~T~--------~lin--~~~l~~M-K~ga~lIN~aR  273 (386)
T PLN02306        234 LREADVISLHPVLDK---TTY--------HLIN--KERLALM-KKEAVLVNASR  273 (386)
T ss_pred             HhhCCEEEEeCCCCh---hhh--------hhcC--HHHHHhC-CCCeEEEECCC
Confidence            999999998632211   011        1111  1334443 58999999983

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.83  E-value=0.023  Score=51.46  Aligned_cols=65  Identities=18%  Similarity=0.411  Sum_probs=42.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +||+|+|++|.||+.++..+...+-+      +|+ ++|.+    .++....    .    .  ..+..+++..+.++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~------elvav~d~~----~~~~~~~----~----~--~~i~~~~dl~~ll~~~   61 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDL------ELVAAVDRP----GSPLVGQ----G----A--LGVAITDDLEAVLADA   61 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecC----Ccccccc----C----C--CCccccCCHHHhccCC
Confidence            68999998899999999888764322      444 58877    3322211    1    1  1233456666677789


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+||.+
T Consensus        62 DvVid~   67 (257)
T PRK00048         62 DVLIDF   67 (257)
T ss_pred             CEEEEC
Confidence            999865

>PRK13529 malate dehydrogenase; Provisional

Probab=95.82  E-value=0.017  Score=57.28  Aligned_cols=125  Identities=14%  Similarity=0.122  Sum_probs=76.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh----CCCCCCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCc-cc-eEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN----GDLLGKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLL-VD-VSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~----~~~~~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~-~~-i~~~~~   76 (329)
                      .||.+.|| |..|..+|..|+.    .|+- .++ .-.++++|.+-  .+....+......+.+...+.. +. -....+
T Consensus       296 ~riv~~GA-GsAgiGia~ll~~~~~~~Gl~-~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~  373 (563)
T PRK13529        296 QRIVFLGA-GSAGCGIADQIVAAMVREGLS-EEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVIS  373 (563)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHHHHHcCCC-hhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCC
Confidence            69999999 9999999998876    4652 111 12899999871  0001112222222221110100 00 012246


Q ss_pred             cccccCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582          77 PITAFKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA  147 (329)
Q Consensus        77 ~~~al~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~  147 (329)
                      +.++++++  |++|=+.+.+.              -..+++.+.|.+++ ++.+|.-.|||..   +...-+.+.+
T Consensus       374 L~e~v~~~kPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~-erPIIFaLSNPt~~aE~tpe~a~~~T  434 (563)
T PRK13529        374 LLEVVRNVKPTVLIGVSGQPG--------------AFTEEIVKEMAAHC-ERPIIFPLSNPTSRAEATPEDLIAWT  434 (563)
T ss_pred             HHHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcC-CCCEEEECCCcCCCcccCHHHHHHhh
Confidence            78999998  98876544332              25567788888887 8889999999974   5556666665

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.81  E-value=0.029  Score=46.95  Aligned_cols=56  Identities=13%  Similarity=0.218  Sum_probs=41.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++++|||.|..+|..++..|...+.       .|.+.+.+    .                        .++.+.++.|
T Consensus        36 Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~----T------------------------~~l~~~~~~A   80 (160)
T PF02882_consen   36 GKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSK----T------------------------KNLQEITRRA   80 (160)
T ss_dssp             T-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TT----S------------------------SSHHHHHTTS
T ss_pred             CCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCC----C------------------------Ccccceeeec
Confidence            47999999988999999999999876       88888776    2                        1234566899


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.|.|.
T Consensus        81 DIVVsa~G~~~   91 (160)
T PF02882_consen   81 DIVVSAVGKPN   91 (160)
T ss_dssp             SEEEE-SSSTT
T ss_pred             cEEeeeecccc
Confidence            99999988764

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=95.81  E-value=0.023  Score=54.26  Aligned_cols=60  Identities=17%  Similarity=0.250  Sum_probs=44.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |+||+.+|..|..-|.       +|..+|..    ... .+      ..       .. ..++.+.++.|
T Consensus       116 gktvGIIG~-G~IG~~vA~~l~a~G~-------~V~~~dp~----~~~-~~------~~-------~~-~~~L~ell~~s  168 (378)
T PRK15438        116 DRTVGIVGV-GNVGRRLQARLEALGI-------KTLLCDPP----RAD-RG------DE-------GD-FRSLDELVQEA  168 (378)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCc----ccc-cc------cc-------cc-cCCHHHHHhhC
Confidence            479999999 9999999999998887       89999965    110 10      00       00 13567888999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|++..
T Consensus       169 DiI~lh~  175 (378)
T PRK15438        169 DILTFHT  175 (378)
T ss_pred             CEEEEeC
Confidence            9999863

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.80  E-value=0.033  Score=49.15  Aligned_cols=33  Identities=21%  Similarity=0.285  Sum_probs=30.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++.|+||+|.+|.+++..|+..|.       +|.+.|++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~   35 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRT   35 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCC
Confidence            4699999999999999999999887       89999987

>KOG1371|consensus

Probab=95.80  E-value=0.1  Score=48.27  Aligned_cols=107  Identities=11%  Similarity=0.112  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cCc--ccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-ENP--ITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~--~~a-   80 (329)
                      ...|.|+||+|++|+|.+..|+.+|.       +|+.+|.-.....+.+. .+..+.+.    ...+.+. .|+  .++ 
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n~~~~sl~-r~~~l~~~----~~~v~f~~~Dl~D~~~L   69 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNNSYLESLK-RVRQLLGE----GKSVFFVEGDLNDAEAL   69 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEecccccchhHHH-HHHHhcCC----CCceEEEEeccCCHHHH
Confidence            46899999999999999999999998       89999986211111111 11111111    1122221 111  122 


Q ss_pred             ---c--CCccEEEEeCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          81 ---F--KDANIAILIGSFPRK-SN-MERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        81 ---l--~~aDiVi~~~g~~~~-~g-~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                         +  ..-|-|++.|+.... +. +.+......|+-....+.+.++++.
T Consensus        70 ~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~  119 (343)
T KOG1371|consen   70 EKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN  119 (343)
T ss_pred             HHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence               2  245778887765431 11 2234455678888888889999884

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.79  E-value=0.11  Score=46.56  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||++.+|.+++..|++.|.       +|++.+++
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~   41 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNS   41 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCC
Confidence            46899999999999999999999887       78887653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.78  E-value=0.023  Score=51.39  Aligned_cols=34  Identities=26%  Similarity=0.307  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+.|+||++  .+|.+++..|++.|.       .|++.+++
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~   41 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQN   41 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecc
Confidence            36789999964  799999999999887       89998876

>PRK05599 hypothetical protein; Provisional

Probab=95.78  E-value=0.11  Score=46.20  Aligned_cols=116  Identities=10%  Similarity=0.140  Sum_probs=63.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEee---------c
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVH---------E   75 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~---------~   75 (329)
                      .+.|+||++.+|.+++..|.+ |.       .|.+.+++    .++++....++........  ..+.++         .
T Consensus         2 ~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~   69 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLCH-GE-------DVVLAARR----PEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVK   69 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCC----HHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHH
Confidence            488999999999999999984 54       89999988    5555555445543210000  001111         0


Q ss_pred             CcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          76 NPITAFKDANIAILIGSFPRKSN---ME---RSELLAINS----SIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~----~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ...+....-|++|+.+|......   .+   ..+....|.    ...+.+.+.+.+.. .++.|+++|--
T Consensus        70 ~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~  138 (246)
T PRK05599         70 QTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSI  138 (246)
T ss_pred             HHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEecc
Confidence            11222456799999888643211   11   112223332    23344556665532 34667776643

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.77  E-value=0.024  Score=52.78  Aligned_cols=35  Identities=23%  Similarity=0.397  Sum_probs=29.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++||+|+||+|..|..+...|....-+      |+.++...
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v------e~~~~ss~   36 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDV------ELILISSR   36 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCe------EEEEeech
Confidence            368999999999999999999987654      88888776

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.76  E-value=0.043  Score=51.77  Aligned_cols=34  Identities=18%  Similarity=0.347  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||.|+|+ |.+|+.++..|+..|. +     +|.++|.+
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGv-g-----~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGV-G-----KVTIVDRD   57 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence            368999999 9999999999999987 4     89999987

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.75  E-value=0.021  Score=52.40  Aligned_cols=74  Identities=12%  Similarity=0.128  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--CcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~~~al~   82 (329)
                      .+++.|+|| |..|.++++.|+..|..      +|.++|++    .++++..+.++.... +.. .+....  +..+.+.
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~------~i~i~nR~----~~ka~~La~~~~~~~-~~~-~~~~~~~~~~~~~~~  193 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQ------KLQVADLD----TSRAQALADVINNAV-GRE-AVVGVDARGIEDVIA  193 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCC------EEEEEcCC----HHHHHHHHHHHhhcc-Ccc-eEEecCHhHHHHHHh
Confidence            368999999 99999999999988763      89999998    566665544443211 110 111111  1123457


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      ++|+||.+.
T Consensus       194 ~~divINaT  202 (283)
T PRK14027        194 AADGVVNAT  202 (283)
T ss_pred             hcCEEEEcC
Confidence            899999874

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.75  E-value=0.03  Score=48.21  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||.|.-+|..++..|++.+.       .|.+.|++  .......+.  .+.|...+.   -..+.++.+.++.|
T Consensus        62 GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~--~~~~~~~~~--~~~hs~t~~---~~~~~~l~~~~~~A  127 (197)
T cd01079          62 GKTITIINRSEVVGRPLAALLANDGA-------RVYSVDIN--GIQVFTRGE--SIRHEKHHV---TDEEAMTLDCLSQS  127 (197)
T ss_pred             CCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecC--ccccccccc--ccccccccc---cchhhHHHHHhhhC
Confidence            57999999988999999999998876       89999987  111100100  111111000   00011256788999


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.|.+.
T Consensus       128 DIVIsAvG~~~  138 (197)
T cd01079         128 DVVITGVPSPN  138 (197)
T ss_pred             CEEEEccCCCC
Confidence            99999988765

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.74  E-value=0.029  Score=53.01  Aligned_cols=74  Identities=20%  Similarity=0.359  Sum_probs=45.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      .+++||+|+||+|.+|..+...|...++-.    .++.++....    .  .|...+...      .++.+..-..+++.
T Consensus         5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~----~~l~~las~r----s--aGk~~~~~~------~~~~v~~~~~~~~~   68 (344)
T PLN02383          5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPY----SSLKMLASAR----S--AGKKVTFEG------RDYTVEELTEDSFD   68 (344)
T ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCCc----ceEEEEEccC----C--CCCeeeecC------ceeEEEeCCHHHHc
Confidence            457899999999999999998888754311    1677665441    1  121111111      12333322245778


Q ss_pred             CccEEEEeCC
Q psy9582          83 DANIAILIGS   92 (329)
Q Consensus        83 ~aDiVi~~~g   92 (329)
                      ++|+||++.+
T Consensus        69 ~~D~vf~a~p   78 (344)
T PLN02383         69 GVDIALFSAG   78 (344)
T ss_pred             CCCEEEECCC
Confidence            9999999764

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.73  E-value=0.031  Score=55.92  Aligned_cols=92  Identities=11%  Similarity=0.155  Sum_probs=58.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.+|+.+|..|...|.       +|..||..    ... + ...++         .+....++.+.+++|
T Consensus       138 gktvgIiG~-G~IG~~vA~~l~~fG~-------~V~~~d~~----~~~-~-~~~~~---------g~~~~~~l~ell~~a  194 (525)
T TIGR01327       138 GKTLGVIGL-GRIGSIVAKRAKAFGM-------KVLAYDPY----ISP-E-RAEQL---------GVELVDDLDELLARA  194 (525)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEECCC----CCh-h-HHHhc---------CCEEcCCHHHHHhhC
Confidence            479999999 9999999999988777       89999985    111 1 11111         122234577899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+|++......   .++        .++-  .+.+... +|++++|+++
T Consensus       195 DvV~l~lPlt~---~T~--------~li~--~~~l~~m-k~ga~lIN~a  229 (525)
T TIGR01327       195 DFITVHTPLTP---ETR--------GLIG--AEELAKM-KKGVIIVNCA  229 (525)
T ss_pred             CEEEEccCCCh---hhc--------cCcC--HHHHhcC-CCCeEEEEcC
Confidence            99999743211   011        1110  1444443 5788888887

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=95.71  E-value=0.07  Score=50.57  Aligned_cols=72  Identities=15%  Similarity=0.214  Sum_probs=44.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a   84 (329)
                      +||+|+||+|.||+.+...|.....|..   .+++++....      ..|.......      ....+.. +..+++++.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~---~~~~~~ss~~------s~g~~~~f~~------~~~~v~~~~~~~~~~~v   65 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDA---IRPVFFSTSQ------LGQAAPSFGG------TTGTLQDAFDIDALKAL   65 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCcc---ccEEEEEchh------hCCCcCCCCC------CcceEEcCcccccccCC
Confidence            4799999999999999998884444421   2788887751      1122111111      1222222 222478999


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |++|+++|
T Consensus        66 Divffa~g   73 (366)
T TIGR01745        66 DIIITCQG   73 (366)
T ss_pred             CEEEEcCC
Confidence            99999875

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.71  E-value=0.07  Score=50.71  Aligned_cols=72  Identities=15%  Similarity=0.207  Sum_probs=43.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a   84 (329)
                      ++|+|+||+|.+|..+...++....+...   +++++....      ..+....+...      ...+.. ...+.++++
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~---~l~~~ss~~------sg~~~~~f~g~------~~~v~~~~~~~~~~~~   66 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLI---EPVFFSTSQ------AGGAAPSFGGK------EGTLQDAFDIDALKKL   66 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcC---cEEEecchh------hCCcccccCCC------cceEEecCChhHhcCC
Confidence            58999999999999999866665544311   578865541      11111122211      111111 113567899


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |+||++++
T Consensus        67 Divf~a~~   74 (369)
T PRK06598         67 DIIITCQG   74 (369)
T ss_pred             CEEEECCC
Confidence            99999865

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.70  E-value=0.028  Score=54.97  Aligned_cols=71  Identities=18%  Similarity=0.309  Sum_probs=45.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc-cCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA-FKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a-l~~   83 (329)
                      |||.|+|+ |.+|..++..|...+.       +++++|.+    .++++......   .... ..+..-...+.++ +++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~-------~v~vid~~----~~~~~~~~~~~---~~~~~~gd~~~~~~l~~~~~~~   65 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN-------DVTVIDTD----EERLRRLQDRL---DVRTVVGNGSSPDVLREAGAED   65 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-------cEEEEECC----HHHHHHHHhhc---CEEEEEeCCCCHHHHHHcCCCc
Confidence            48999998 9999999999998887       89999998    44443221101   0000 0111111223334 789


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      +|.||++.
T Consensus        66 a~~vi~~~   73 (453)
T PRK09496         66 ADLLIAVT   73 (453)
T ss_pred             CCEEEEec
Confidence            99999873

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=95.67  E-value=0.069  Score=48.78  Aligned_cols=119  Identities=17%  Similarity=0.159  Sum_probs=70.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCc-cceEeecCcccccC-
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLL-VDVSVHENPITAFK-   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~-~~i~~~~~~~~al~-   82 (329)
                      ++|.|+|++|+||+++...++....-.     +|+.+|.-  .....++ ...++.+.. ..+. .++.-.....+.++ 
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~-----~v~~~DkL--TYAgn~~-~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDD-----HVVNLDKL--TYAGNLE-NLADVEDSPRYRFVQGDICDRELVDRLFKE   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCc-----eEEEEecc--cccCCHH-HHHhhhcCCCceEEeccccCHHHHHHHHHh
Confidence            579999999999999999988765421     68888875  1111222 112232211 0111 12211122234455 


Q ss_pred             -CccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 -DANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 -~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                       +.|.|+..|.-.-  ++=.....++..|+-....+.+..+++- ..-.++-+|
T Consensus        73 ~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HIS  125 (340)
T COG1088          73 YQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHIS  125 (340)
T ss_pred             cCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEec
Confidence             5899998764322  1112355778899999999999999984 433444444

>PRK07041 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.033  Score=48.85  Aligned_cols=112  Identities=7%  Similarity=0.031  Sum_probs=60.4

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccc---cCC
Q psy9582           9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITA---FKD   83 (329)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~a---l~~   83 (329)
                      .|+||+|.+|..++..|++.|.       +|++.+++    .+.+.....++.... ... ..++.-..+..++   +..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   69 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRS----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGP   69 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCC
Confidence            3899999999999999999987       89999998    333433333332100 000 0011111111222   334


Q ss_pred             ccEEEEeCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKS---NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~---g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .|++|..+|.....   ..   .....+..|+.....+.+ +.... +.+.|++++
T Consensus        70 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~~~-~~g~iv~~s  123 (230)
T PRK07041         70 FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARIA-PGGSLTFVS  123 (230)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh-hhhhc-CCeEEEEEC
Confidence            79999988764321   11   123445566665556655 22222 344555544

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.64  E-value=0.026  Score=51.64  Aligned_cols=56  Identities=11%  Similarity=0.143  Sum_probs=45.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||.||.||..++..|++.+.       +|+++...    ..                        ++.+.+++|
T Consensus       158 Gk~v~vIG~S~ivG~Pla~lL~~~ga-------tVtv~~s~----t~------------------------~l~~~~~~A  202 (284)
T PRK14179        158 GKHAVVIGRSNIVGKPMAQLLLDKNA-------TVTLTHSR----TR------------------------NLAEVARKA  202 (284)
T ss_pred             CCEEEEECCCCcCcHHHHHHHHHCCC-------EEEEECCC----CC------------------------CHHHHHhhC
Confidence            57999999999999999999999886       88888443    10                        245678999


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.|.|.
T Consensus       203 DIVI~avg~~~  213 (284)
T PRK14179        203 DILVVAIGRGH  213 (284)
T ss_pred             CEEEEecCccc
Confidence            99999987765

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=95.60  E-value=0.041  Score=49.52  Aligned_cols=38  Identities=21%  Similarity=0.255  Sum_probs=30.6

Q ss_pred             CCC-CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLK-KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+ +.+.+.|+||+  +.+|..++..|++.|.       +|++.+++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~   41 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLP   41 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecC
Confidence            553 34678999985  6999999999999887       88888765

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.58  E-value=0.045  Score=51.75  Aligned_cols=25  Identities=24%  Similarity=0.426  Sum_probs=21.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDL   30 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (329)
                      +||+|+||+|.+|..++..|.....
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~   27 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPE   27 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCC
Confidence            5899999999999999998887644

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.57  E-value=0.12  Score=40.95  Aligned_cols=23  Identities=26%  Similarity=0.559  Sum_probs=20.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGD   29 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~   29 (329)
                      ||+|+|++|.+|..++..|....
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~   23 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHP   23 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCC
Confidence            68999987999999999888853

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.56  E-value=0.039  Score=46.12  Aligned_cols=67  Identities=16%  Similarity=0.182  Sum_probs=43.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..+++.|+|- |.+|+.+|..|...|.       .|.++|++    +-++      ++..+..    +++. ...++++.
T Consensus        22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga-------~V~V~e~D----Pi~a------lqA~~dG----f~v~-~~~~a~~~   78 (162)
T PF00670_consen   22 AGKRVVVIGY-GKVGKGIARALRGLGA-------RVTVTEID----PIRA------LQAAMDG----FEVM-TLEEALRD   78 (162)
T ss_dssp             TTSEEEEE---SHHHHHHHHHHHHTT--------EEEEE-SS----HHHH------HHHHHTT-----EEE--HHHHTTT
T ss_pred             CCCEEEEeCC-CcccHHHHHHHhhCCC-------EEEEEECC----hHHH------HHhhhcC----cEec-CHHHHHhh
Confidence            4578999999 9999999999999887       89999999    3222      1221112    2332 46789999


Q ss_pred             ccEEEEeCCC
Q psy9582          84 ANIAILIGSF   93 (329)
Q Consensus        84 aDiVi~~~g~   93 (329)
                      +|++|.+.|.
T Consensus        79 adi~vtaTG~   88 (162)
T PF00670_consen   79 ADIFVTATGN   88 (162)
T ss_dssp             -SEEEE-SSS
T ss_pred             CCEEEECCCC
Confidence            9999887554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.55  E-value=0.017  Score=46.72  Aligned_cols=34  Identities=26%  Similarity=0.519  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|+|+ |.+|+.++..|+..|. +     +++|+|.+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~-----~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGV-G-----KITLVDDD   35 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTT-S-----EEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCC-C-----ceeecCCc
Confidence            469999999 9999999999999987 3     89999998

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.55  E-value=0.044  Score=42.77  Aligned_cols=30  Identities=23%  Similarity=0.501  Sum_probs=26.5

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |.|+|. |.+|..++..|...+.       +++++|.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~-------~vvvid~d   30 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGI-------DVVVIDRD   30 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTS-------EEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCC-------EEEEEECC
Confidence            679998 9999999999999764       89999999

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.53  E-value=0.034  Score=52.37  Aligned_cols=71  Identities=17%  Similarity=0.344  Sum_probs=43.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|+||+|.+|..++..|...++-.    .+|+.+-.+.    .  .+...++..      ..+.+......+++++|
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~----~~l~~l~s~~----~--~g~~l~~~g------~~i~v~d~~~~~~~~vD   65 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPV----DKLRLLASAR----S--AGKELSFKG------KELKVEDLTTFDFSGVD   65 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCc----ceEEEEEccc----c--CCCeeeeCC------ceeEEeeCCHHHHcCCC
Confidence            589999999999999999998754411    2777775541    1  111111211      12333222234568999


Q ss_pred             EEEEeCC
Q psy9582          86 IAILIGS   92 (329)
Q Consensus        86 iVi~~~g   92 (329)
                      +||++.|
T Consensus        66 vVf~A~g   72 (334)
T PRK14874         66 IALFSAG   72 (334)
T ss_pred             EEEECCC
Confidence            9999854

>PRK08017 oxidoreductase; Provisional

Probab=95.52  E-value=0.049  Score=48.49  Aligned_cols=33  Identities=15%  Similarity=0.196  Sum_probs=30.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++|.|+||+|.+|.+++..|++.|.       +|++++++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~   35 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRK   35 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            3699999999999999999998886       89999988

>KOG1200|consensus

Probab=95.49  E-value=0.24  Score=42.66  Aligned_cols=126  Identities=13%  Similarity=0.138  Sum_probs=75.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc----ccCCc----cceEee-c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC----IFPLL----VDVSVH-E   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~----~~~~~----~~i~~~-~   75 (329)
                      +....|.||+..||.+++..|+..|.       +|...|.+    ...+++-+.+|...    .+.+.    .++.-+ .
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Ga-------rv~v~dl~----~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~   82 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGA-------RVAVADLD----SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLE   82 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCc-------EEEEeecc----hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHH
Confidence            35677899988999999999999998       89999999    45556666666431    11111    011110 0


Q ss_pred             CcccccCCccEEEEeCCCCCCCC------CCHHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCchhhHHH
Q psy9582          76 NPITAFKDANIAILIGSFPRKSN------MERSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNPVNTNTY  141 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g------~~~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP~~~~~~  141 (329)
                      ...+.+---++++.++|..+..-      ..+.+.+..|+.-+    +..++.+........-||+++--+..+..
T Consensus        83 e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN  158 (256)
T KOG1200|consen   83 EMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN  158 (256)
T ss_pred             HHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc
Confidence            11123445689999999876432      23555566666533    33444433322123367888876655443

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.48  E-value=0.039  Score=55.20  Aligned_cols=92  Identities=13%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.+|+.+|..|...|.       +|+.||..    ... + ...++         .+... ++.+.++.|
T Consensus       140 gktvgIiG~-G~IG~~vA~~l~~fG~-------~V~~~d~~----~~~-~-~~~~~---------g~~~~-~l~ell~~a  195 (526)
T PRK13581        140 GKTLGIIGL-GRIGSEVAKRAKAFGM-------KVIAYDPY----ISP-E-RAAQL---------GVELV-SLDELLARA  195 (526)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEECCC----CCh-h-HHHhc---------CCEEE-cHHHHHhhC
Confidence            479999999 9999999999998887       89999986    211 1 11111         11222 567899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.....   .++        .++-  .+.+... +|++++|+++-
T Consensus       196 DiV~l~lP~t~---~t~--------~li~--~~~l~~m-k~ga~lIN~aR  231 (526)
T PRK13581        196 DFITLHTPLTP---ETR--------GLIG--AEELAKM-KPGVRIINCAR  231 (526)
T ss_pred             CEEEEccCCCh---Hhh--------cCcC--HHHHhcC-CCCeEEEECCC
Confidence            99999743211   011        1110  1333433 57888888874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.48  E-value=0.056  Score=49.82  Aligned_cols=79  Identities=10%  Similarity=0.107  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~~al   81 (329)
                      .+++.|+|| |.+|.+++..|+..|.-      +|++++++... .++++..+.++.+...... .....+  .+..+.+
T Consensus       126 ~k~vlI~GA-GGagrAia~~La~~G~~------~V~I~~R~~~~-~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~  197 (289)
T PRK12548        126 GKKLTVIGA-GGAATAIQVQCALDGAK------EITIFNIKDDF-YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI  197 (289)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCC------EEEEEeCCchH-HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh
Confidence            468999999 99999999999988862      69999998200 1444444444432210100 001111  1223456


Q ss_pred             CCccEEEEeC
Q psy9582          82 KDANIAILIG   91 (329)
Q Consensus        82 ~~aDiVi~~~   91 (329)
                      +.+|+||.+.
T Consensus       198 ~~~DilINaT  207 (289)
T PRK12548        198 ASSDILVNAT  207 (289)
T ss_pred             ccCCEEEEeC
Confidence            7889999864

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.47  E-value=0.048  Score=44.62  Aligned_cols=56  Identities=11%  Similarity=0.189  Sum_probs=44.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.++|.|+|.+..+|..++..|.+.+.       ++.+.|.+    ..                        ++.+++++
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~ga-------tV~~~~~~----t~------------------------~l~~~v~~   71 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGA-------TVYSCDWK----TI------------------------QLQSKVHD   71 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeCCC----Cc------------------------CHHHHHhh
Confidence            357999999988999999999988776       78888766    11                        34567899


Q ss_pred             ccEEEEeCCCC
Q psy9582          84 ANIAILIGSFP   94 (329)
Q Consensus        84 aDiVi~~~g~~   94 (329)
                      ||+||.+.|.+
T Consensus        72 ADIVvsAtg~~   82 (140)
T cd05212          72 ADVVVVGSPKP   82 (140)
T ss_pred             CCEEEEecCCC
Confidence            99999987765

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.46  E-value=0.045  Score=48.23  Aligned_cols=31  Identities=29%  Similarity=0.339  Sum_probs=27.6

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |.|+||+|++|.+++..|++.|.       +++++++.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~   31 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHS   31 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            57999999999999999999987       88888765

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.46  E-value=0.17  Score=45.58  Aligned_cols=74  Identities=18%  Similarity=0.286  Sum_probs=45.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||+|.||+|.||+.+...+.+.+-+.     =+..+|+.    .....+  .|.......-...+.++.++.....++
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~-----L~aa~~~~----~~~~~g--~d~ge~~g~~~~gv~v~~~~~~~~~~~   70 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLE-----LVAAFDRP----GSLSLG--SDAGELAGLGLLGVPVTDDLLLVKADA   70 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCce-----EEEEEecC----Cccccc--cchhhhccccccCceeecchhhcccCC
Confidence            4689999999999999999998776331     34455665    111111  122222111112455566667788899


Q ss_pred             cEEEE
Q psy9582          85 NIAIL   89 (329)
Q Consensus        85 DiVi~   89 (329)
                      |++|=
T Consensus        71 DV~ID   75 (266)
T COG0289          71 DVLID   75 (266)
T ss_pred             CEEEE
Confidence            99884

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.45  E-value=0.066  Score=50.12  Aligned_cols=92  Identities=15%  Similarity=0.189  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++++|+|. |.||+.+|..+..-|.       +|.-+|+.    .. .+ ...+.         ..+... +.+.++.|
T Consensus       146 gktvGIiG~-GrIG~avA~r~~~Fgm-------~v~y~~~~----~~-~~-~~~~~---------~~~y~~-l~ell~~s  201 (324)
T COG1052         146 GKTLGIIGL-GRIGQAVARRLKGFGM-------KVLYYDRS----PN-PE-AEKEL---------GARYVD-LDELLAES  201 (324)
T ss_pred             CCEEEEECC-CHHHHHHHHHHhcCCC-------EEEEECCC----CC-hH-HHhhc---------Cceecc-HHHHHHhC
Confidence            579999998 9999999999995565       89999998    22 11 10111         112222 67899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|++......   +++.   .-|       .+.+++. ++++++||.+-
T Consensus       202 Dii~l~~Plt~---~T~h---Lin-------~~~l~~m-k~ga~lVNtaR  237 (324)
T COG1052         202 DIISLHCPLTP---ETRH---LIN-------AEELAKM-KPGAILVNTAR  237 (324)
T ss_pred             CEEEEeCCCCh---HHhh---hcC-------HHHHHhC-CCCeEEEECCC
Confidence            99998643211   0111   111       1344444 58899998873

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.43  E-value=0.28  Score=44.03  Aligned_cols=38  Identities=21%  Similarity=0.229  Sum_probs=31.5

Q ss_pred             CCCC--CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKK--PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||.+  .+.+.|+||+  +.+|.+++..|++.|.       +|++.+++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~   42 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAG   42 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCc
Confidence            5543  4688999996  6999999999999987       89998765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.41  E-value=0.054  Score=47.84  Aligned_cols=32  Identities=16%  Similarity=0.218  Sum_probs=27.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~   45 (329)
                      .+.|+||+|++|.+++..|++.|.       +|.+. +++
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~-------~v~~~~~~~   35 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGY-------TVAVNYQQN   35 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCC
Confidence            699999999999999999999886       77764 454

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.40  E-value=0.059  Score=46.78  Aligned_cols=34  Identities=18%  Similarity=0.413  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|+|+ |.+|+.++..|+..|. +     +|+++|.+
T Consensus        19 ~s~VlviG~-gglGsevak~L~~~GV-g-----~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGA-GALGAEIAKNLVLAGI-D-----SITIVDHR   52 (198)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCC-C-----EEEEEECC
Confidence            369999999 9999999999999997 3     89999977

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.40  E-value=0.051  Score=51.41  Aligned_cols=34  Identities=21%  Similarity=0.407  Sum_probs=27.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~   45 (329)
                      +||+|+||+|.+|..++..|.....+      +++ +++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~------el~~l~~s~   35 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEV------EITYLVSSR   35 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCc------eEEEEeccc
Confidence            58999999999999999999876443      677 66765

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.38  E-value=0.069  Score=52.21  Aligned_cols=100  Identities=13%  Similarity=0.174  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.++|.|+|+ |.+|..+|..|+..|.       +|+++|.+.   .+.+.....++....    ..+.......+...+
T Consensus         4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~-------~V~~~d~~~---~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~   68 (450)
T PRK14106          4 KGKKVLVVGA-GVSGLALAKFLKKLGA-------KVILTDEKE---EDQLKEALEELGELG----IELVLGEYPEEFLEG   68 (450)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCCc---hHHHHHHHHHHHhcC----CEEEeCCcchhHhhc
Confidence            3579999999 8899999999999998       899999982   122222222332111    111111111234578


Q ss_pred             ccEEEEeCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHh
Q psy9582          84 ANIAILIGSFPRKSNMERSEL-LAINSSIFIEQGKALN  120 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~-~~~n~~~~~~i~~~i~  120 (329)
                      +|+||.++|.+.  ..+.... -..+++++...+....
T Consensus        69 ~d~vv~~~g~~~--~~~~~~~a~~~~i~~~~~~~~~~~  104 (450)
T PRK14106         69 VDLVVVSPGVPL--DSPPVVQAHKKGIEVIGEVELAYR  104 (450)
T ss_pred             CCEEEECCCCCC--CCHHHHHHHHCCCcEEeHHHHHHh
Confidence            999999888643  1111111 2345555555544333

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.37  E-value=0.12  Score=52.54  Aligned_cols=140  Identities=13%  Similarity=0.101  Sum_probs=81.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCc-ccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENP-ITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~-~~al~~   83 (329)
                      .+|.|+|. |.+|+.++..|...+.       +++++|.|    +++.+.    +++...+. ..+.+-..-+ ...+++
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~-------~vvvID~d----~~~v~~----~~~~g~~v~~GDat~~~~L~~agi~~  464 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKM-------RITVLERD----ISAVNL----MRKYGYKVYYGDATQLELLRAAGAEK  464 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCC-------CEEEEECC----HHHHHH----HHhCCCeEEEeeCCCHHHHHhcCCcc
Confidence            68999998 9999999999998887       89999999    554442    22211111 1111100111 234779


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhHHHHHHHHCCCCCCCcEEEechhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTNTYITMKSAPDLSYKNFTAMLRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld  162 (329)
                      ||.||++-+..           ..|    ..++..+++.. |+..++.- .||.+.-  .+. .. |.  +.++-=+..-
T Consensus       465 A~~vv~~~~d~-----------~~n----~~i~~~~r~~~-p~~~IiaRa~~~~~~~--~L~-~~-Ga--~~vv~e~~es  522 (601)
T PRK03659        465 AEAIVITCNEP-----------EDT----MKIVELCQQHF-PHLHILARARGRVEAH--ELL-QA-GV--TQFSRETFSS  522 (601)
T ss_pred             CCEEEEEeCCH-----------HHH----HHHHHHHHHHC-CCCeEEEEeCCHHHHH--HHH-hC-CC--CEEEccHHHH
Confidence            99999873221           223    34556667774 88665544 4664432  222 23 33  2344334444


Q ss_pred             HHHHHHHHHHHhCCCCCCeeE
Q psy9582         163 HNRAIAKLASKLNEPVSSIKK  183 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~  183 (329)
                      +..+....-..+|++++++..
T Consensus       523 ~l~l~~~~L~~lg~~~~~~~~  543 (601)
T PRK03659        523 ALELGRKTLVSLGMHPHQAQR  543 (601)
T ss_pred             HHHHHHHHHHHcCCCHHHHHH
Confidence            455666777788888877753

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.37  E-value=0.064  Score=49.99  Aligned_cols=88  Identities=18%  Similarity=0.188  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|- |.||+.+|..+..-|.       +|..||..    ... .       +.  .    +. ..++.+.++.|
T Consensus       145 gktvGIiG~-G~IG~~vA~~~~~fgm-------~V~~~d~~----~~~-~-------~~--~----~~-~~~l~ell~~s  197 (311)
T PRK08410        145 GKKWGIIGL-GTIGKRVAKIAQAFGA-------KVVYYSTS----GKN-K-------NE--E----YE-RVSLEELLKTS  197 (311)
T ss_pred             CCEEEEECC-CHHHHHHHHHHhhcCC-------EEEEECCC----ccc-c-------cc--C----ce-eecHHHHhhcC
Confidence            479999998 9999999999887676       89999986    211 0       00  0    11 13577899999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|++.... +...++       -|       .+.+... +|++++||++-
T Consensus       198 Dvv~lh~Plt~~T~~l-------i~-------~~~~~~M-k~~a~lIN~aR  233 (311)
T PRK08410        198 DIISIHAPLNEKTKNL-------IA-------YKELKLL-KDGAILINVGR  233 (311)
T ss_pred             CEEEEeCCCCchhhcc-------cC-------HHHHHhC-CCCeEEEECCC
Confidence            999987422 211111       01       1333333 58999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	329
1b8p_A	329	Malate Dehydrogenase From Aquaspirillum Arcticum Le		1e-115
3d5t_A	331	Crystal Structure Of Malate Dehydrogenase From Burk		1e-107
1iz9_A	327	Crystal Structure Of Malate Dehydrogenase From Ther		3e-92
1bmd_A	327	Determinants Of Protein Thermostability Observed In		3e-92
1wze_A	327	Structural Basis For Alteration Of Cofactor Specifi		4e-92
1bdm_A	327	The Structure At 1.8 Angstroms Resolution Of A Sing		1e-91
4mdh_A	334	Refined Crystal Structure Of Cytoplasmic Malate Deh		6e-71
5mdh_A	333	Crystal Structure Of Ternary Complex Of Porcine Cyt		6e-71
4h7p_A	345	Crystal Structure Of A Putative Cytosolic Malate De		6e-62
7mdh_A	375	Structural Basis For Light Acitvation Of A Chloropl		3e-60
1civ_A	385	Chloroplast Nadp-Dependent Malate Dehydrogenase Fro		4e-60
3fi9_A	343	Crystal Structure Of Malate Dehydrogenase From Porp		1e-10
3gvh_A	324	Crystal Structure Of LactateMALATE DEHYDROGENASE FR		2e-09
3nep_X	314	1.55a Resolution Structure Of Malate Dehydrogenase		4e-09
1hyg_A	313	Crystal Structure Of Mj0490 Gene Product, The Famil		6e-08
1gv0_A	310	Structural Basis For Thermophilic Protein Stability		3e-07
2d4a_A	308	Structure Of The Malate Dehydrogenase From Aeropyru		2e-06
1gv1_A	310	Structural Basis For Thermophilic Protein Stability		2e-06
2hjr_A	328	Crystal Structure Of Cryptosporidium Parvum Malate		3e-06
3tl2_A	315	Crystal Structure Of Bacillus Anthracis Str. Ames M		4e-06
1guz_A	310	Structural Basis For Thermophilic Protein Stability		2e-05
1a5z_A	319	Lactate Dehydrogenase From Thermotoga Maritima (tml		2e-05
2a92_A	321	Crystal Structure Of Lactate Dehydrogenase From Pla		9e-05
2x0i_A	294	2.9 A Resolution Structure Of Malate Dehydrogenase		2e-04
1oc4_A	322	Lactate Dehydrogenase From Plasmodium Berghei Lengt		4e-04
3vku_A	326	Penta Mutant Of Lactobacillus Casei Lactate Dehydro		8e-04

>pdb|1B8P|A Chain A, Malate Dehydrogenase From Aquaspirillum Arcticum Length = 329

Iteration: 1
 Score =  410 bits (1055), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 184/329 (55%), Positives = 248/329 (75%), Gaps = 2/329 (0%)
Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQI Y+++FRIANGD+LGKDQP+ILQLLE  N+K+QKA++GV+MEI
Sbjct: 1   MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI 60
Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  ++ H +P+TAFKDA++A+L+G+ PR   MER +LL  N+ IF  QGKA++
Sbjct: 61  DDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID 120
Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR++KVLVVGNP NTN YI MKSAP L  KNFTAMLRLDHNRA++++A+K  +PVSS
Sbjct: 121 AVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSS 180
Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXX 240
           I+K+FVWGNHS +MY DYRYA ++G  ++DMIN+++ WN++ FLP               
Sbjct: 181 IEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDA-WNRDTFLPTVGKRGAAIIDARGV 239
Query: 241 XXXXXXXXXXIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
                     IDHI DW+ GT   W TMGIPSDGSY +P+ +IFGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQG 299
Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           L ID FS+++IN+++ EL  E   + HL+
Sbjct: 300 LSIDAFSQERINVTLNELLEEQNGVQHLL 328

>pdb|3D5T|A Chain A, Crystal Structure Of Malate Dehydrogenase From Burkholderia Pseudomallei Length = 331

Iteration: 1
 Score =  383 bits (984), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/330 (53%), Positives = 240/330 (72%), Gaps = 4/330 (1%)
Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K   R+++TGAAGQI Y+++FRIANGDLLGKDQP+ILQLL+    ++Q A+KGV+ME+
Sbjct: 5   MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLP--QAQAAVKGVVMEL 62
Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  V + ++P  AFKDA++A+L+G+ PR   MER +LL+ N+ IF  QG ALN
Sbjct: 63  DDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALN 122
Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
            VASRDVKVLVVGNP NTN YI MKSAPDL  KNFTAMLRLDHNRA+++LA+K  +PV+S
Sbjct: 123 EVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVAS 182
Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXX 240
           I+K+ VWGNHS +MYPD+R+AT  G  +  +IN++  WN++ F+P               
Sbjct: 183 IEKLAVWGNHSPTMYPDFRFATAEGESLLKLINDD-VWNRDTFIPTVGKRGAAIIEARGL 241
Query: 241 XXXXXXXXXXIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
                     IDH++DW+ GT   WVTMGIPSDGSY +P+DII+G PV  +N +YK ++ 
Sbjct: 242 SSAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPEDIIYGVPVICENGEYKRVEG 301
Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLIR 329
           LEID FSR+K++ ++ EL  E   ++HL++
Sbjct: 302 LEIDAFSREKMDGTLAELLEERDGVAHLLK 331

>pdb|1IZ9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Thermus Thermophilus Hb8 Length = 327

Iteration: 1
 Score =  335 bits (858), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 153/328 (46%), Positives = 223/328 (67%), Gaps = 6/328 (1%)
Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLLE    ++ KA++GV+ME+E
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELE 58
Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           DC FPLL  +   ++P  AFKDA+ A+L+G+ PRK+ MER +LL +N  IF EQG+AL  
Sbjct: 59  DCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118
Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
           VA +DVKVLVVGNP NTN  I  K+AP L+ +NFTAM RLDHNRA A+LA K    V  I
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRI 178
Query: 182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXX 241
           +++ VWGNHS +M+PD  +A V+G    ++++    W + VF+P                
Sbjct: 179 RRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME--WYEKVFIPTVAQRGAAIIQARGAS 236
Query: 242 XXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
                    I+HI+DW  GT   +WV+M +PS G Y +P+ I++ FPV  K+  Y++++ 
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 300 LEIDKFSRKKINLSIEELKNEILSISHL 327
           LEI++F+RK++ ++ +EL +E+  +  L
Sbjct: 297 LEINEFARKRMEITAQELLDEMEQVKAL 324

>pdb|1BMD|A Chain A, Determinants Of Protein Thermostability Observed In The 1.9 Angstroms Crystal Structure Of Malate Dehydrogenase From The Thermophilic Bacterium Thermus Flavus Length = 327

Iteration: 1
 Score =  334 bits (857), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 153/328 (46%), Positives = 223/328 (67%), Gaps = 6/328 (1%)
Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLLE    ++ KA++GV+ME+E
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELE 58
Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           DC FPLL  +   ++P  AFKDA+ A+L+G+ PRK+ MER +LL +N  IF EQG+AL  
Sbjct: 59  DCAFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118
Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
           VA +DVKVLVVGNP NTN  I  K+AP L+ +NFTAM RLDHNRA A+LA K    V  I
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRI 178
Query: 182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXX 241
           +++ VWGNHS +M+PD  +A V+G    ++++    W + VF+P                
Sbjct: 179 RRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME--WYEKVFIPTVAQRGAAIIQARGAS 236
Query: 242 XXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
                    I+HI+DW  GT   +WV+M +PS G Y +P+ I++ FPV  K+  Y++++ 
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 300 LEIDKFSRKKINLSIEELKNEILSISHL 327
           LEI++F+RK++ ++ +EL +E+  +  L
Sbjct: 297 LEINEFARKRMEITAQELLDEMEQVKAL 324

>pdb|1WZE|A Chain A, Structural Basis For Alteration Of Cofactor Specificity Of Malate Dehydrogenase From Thermus Flavus Length = 327

Iteration: 1
 Score =  334 bits (856), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 224/328 (68%), Gaps = 6/328 (1%)
Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLL   +++S +A++GV+ME+E
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL--GSERSFQALEGVVMELE 58
Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           DC FPLL  +   ++P  AFKDA+ A+L+G+ PRK+ MER +LL +N  IF EQG+AL  
Sbjct: 59  DCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118
Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
           VA +DVKVLVVGNP NTN  I  K+AP L+ +NFTAM RLDHNRA A+LA K    V  I
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRI 178
Query: 182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXX 241
           +++ VWGNHS +M+PD  +A V+G    ++++    W + VF+P                
Sbjct: 179 RRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME--WYEKVFIPTVAQRGAAIIQARGAS 236
Query: 242 XXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
                    I+HI+DW  GT   +WV+M +PS G Y +P+ I++ FPV  K+  Y++++ 
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 300 LEIDKFSRKKINLSIEELKNEILSISHL 327
           LEI++F+RK++ ++ +EL +E+  +  L
Sbjct: 297 LEINEFARKRMEITAQELLDEMEQVKAL 324

>pdb|1BDM|A Chain A, The Structure At 1.8 Angstroms Resolution Of A Single Site Mutant (T189i) Of Malate Dehydrogenase From Thermus Flavus With Increased Enzymatic Activity Length = 327

Iteration: 1
 Score =  332 bits (852), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 153/328 (46%), Positives = 222/328 (67%), Gaps = 6/328 (1%)
Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLLE    ++ KA++GV+ME+E
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELE 58
Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           DC FPLL  +   ++P  AFKDA+ A+L+G+ PRK+ MER +LL +N  IF EQG+AL  
Sbjct: 59  DCAFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118
Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
           VA +DVKVLVVGNP NTN  I  K+AP L+ +NFTAM RLDHNRA A+LA K    V  I
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRI 178
Query: 182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXX 241
           +++ VWGNHS  M+PD  +A V+G    ++++    W + VF+P                
Sbjct: 179 RRMTVWGNHSSIMFPDLFHAEVDGRPALELVDME--WYEKVFIPTVAQRGAAIIQARGAS 236
Query: 242 XXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
                    I+HI+DW  GT   +WV+M +PS G Y +P+ I++ FPV  K+  Y++++ 
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 300 LEIDKFSRKKINLSIEELKNEILSISHL 327
           LEI++F+RK++ ++ +EL +E+  +  L
Sbjct: 297 LEINEFARKRMEITAQELLDEMEQVKAL 324

>pdb|4MDH|A Chain A, Refined Crystal Structure Of Cytoplasmic Malate Dehydrogenase At 2.5-Angstroms Resolution Length = 334

Iteration: 1
 Score =  264 bits (674), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 195/324 (60%), Gaps = 10/324 (3%)
Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ +       + GV+ME++DC
Sbjct: 3   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT--PMMGVLDGVLMELQDC 60
Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
             PLL DV   +    AFKD ++AIL+GS PR+  MER +LL  N  IF  QG AL+  A
Sbjct: 61  ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 120
Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
            + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA A++A KL      +K 
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKN 180
Query: 184 VFVWGNHSLSMYPDYRYATV----NGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXX 239
           V +WGNHS + YPD  +A V      V + + + ++S W K  F+               
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDS-WLKGEFITTVQQRGAAVIKARK 239
Query: 240 XXXXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKYKI 296
                       DH++D  FGT    +V+MGI SDG SY VP D+++ FPV IK+  +KI
Sbjct: 240 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKI 299
Query: 297 IQNLEIDKFSRKKINLSIEELKNE 320
           ++ L I+ FSR+K++L+ +EL  E
Sbjct: 300 VEGLPINDFSREKMDLTAKELAEE 323

>pdb|5MDH|A Chain A, Crystal Structure Of Ternary Complex Of Porcine Cytoplasmic Malate Dehydrogenase Alpha-Ketomalonate And Tnad At 2.4 Angstroms Resolution Length = 333

Iteration: 1
 Score =  264 bits (674), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 195/324 (60%), Gaps = 10/324 (3%)
Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ +       + GV+ME++DC
Sbjct: 2   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT--PMMGVLDGVLMELQDC 59
Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
             PLL DV   +    AFKD ++AIL+GS PR+  MER +LL  N  IF  QG AL+  A
Sbjct: 60  ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 119
Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
            + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA A++A KL      +K 
Sbjct: 120 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKN 179
Query: 184 VFVWGNHSLSMYPDYRYATV----NGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXX 239
           V +WGNHS + YPD  +A V      V + + + ++S W K  F+               
Sbjct: 180 VIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDS-WLKGEFITTVQQRGAAVIKARK 238
Query: 240 XXXXXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKYKI 296
                       DH++D  FGT    +V+MGI SDG SY VP D+++ FPV IK+  +KI
Sbjct: 239 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKI 298
Query: 297 IQNLEIDKFSRKKINLSIEELKNE 320
           ++ L I+ FSR+K++L+ +EL  E
Sbjct: 299 VEGLPINDFSREKMDLTAKELAEE 322

>pdb|4H7P|A Chain A, Crystal Structure Of A Putative Cytosolic Malate Dehydrogenase From Leishmania Major Friedlin Length = 345

Iteration: 1
 Score =  234 bits (596), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 125/319 (39%), Positives = 184/319 (57%), Gaps = 8/319 (2%)
Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           V++++TGAAGQIGY ++  IA G LLG   P+ L+LL+   + + KA+ GV  E+EDC F
Sbjct: 25  VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDI--EPALKALAGVEAELEDCAF 82
Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
           PLL  V V  +P  AF    IAI+ G+FPRK+ MER +LL +N+ IF EQG+A+ +VA+ 
Sbjct: 83  PLLDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAAS 142
Query: 126 DVKVLVVGNPVNTNTYITMKSAPD-LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV 184
           D +V+VVGNP NTN  I +KSA   L+ ++ TAM RLDHNRA++ LA K   PVS ++ V
Sbjct: 143 DCRVVVVGNPANTNALILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNV 202
Query: 185 FVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXXXXX 244
            +WGNHS +  PD   A +     R+ I +++    + F+                    
Sbjct: 203 IIWGNHSSTQVPDTDSAVIGTTPAREAIKDDAL--DDDFVQVVRGRGAEIIQLRGLSSAM 260
Query: 245 XXXXXXIDHIKDWIFGTEN--WVTMGIPSD-GSYNVPKDIIFGFPVKIKNSKYKIIQNLE 301
                 +DH+ DWI GT    +V+MG+ SD   Y VP  +IF FP      ++ ++    
Sbjct: 261 SAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCHAGEWTVVSGKL 320
Query: 302 IDKFSRKKINLSIEELKNE 320
                ++++  +I EL+ E
Sbjct: 321 NGDLGKQRLASTIAELQEE 339

>pdb|7MDH|A Chain A, Structural Basis For Light Acitvation Of A Chloroplast Enzyme. The Structure Of Sorghum Nadp-Malate Dehydrogenase In Its Oxidized Form Length = 375

Iteration: 1
 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/329 (38%), Positives = 195/329 (59%), Gaps = 7/329 (2%)
Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           KK V I+++GAAG I  +++F++A+G++ G+DQPI L+LL   +++S +A++GV ME+ED
Sbjct: 30  KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLL--GSERSFQALEGVAMELED 87
Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
            ++PLL +VS+  +P   F+D + A+LIG+ PR   MER+ LL IN  IF +QGKALN+V
Sbjct: 88  SLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147
Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           AS++VKVLVVGNP NTN  I +K+APD+  KNF A+ RLD NRA  +LA K       + 
Sbjct: 148 ASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVS 207
Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXXX 242
            V +WGNHS +  PD+  A ++G  ++++I     W +  F                   
Sbjct: 208 NVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTK-WLEEEFTITVQKRGGALIQKWGRSS 266
Query: 243 XXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGS-YNVPKDIIFGFPVKIK-NSKYKIIQ 298
                    D IK  +  T   +W + G+ + G+ Y + +DI+F  P + K +  Y++  
Sbjct: 267 AASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELAT 326
Query: 299 NLEIDKFSRKKINLSIEELKNEILSISHL 327
           ++  D F  ++I  S  EL  E   ++HL
Sbjct: 327 DVSNDDFLWERIKKSEAELLAEKKCVAHL 355

>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From Flaveria Bidentis Length = 385

Iteration: 1
 Score =  228 bits (581), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/329 (37%), Positives = 198/329 (60%), Gaps = 7/329 (2%)
Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           KK + ++++GAAG I  +++F++A+G++ G DQPI L+LL   +++S  A++GV ME+ED
Sbjct: 40  KKIINVAVSGAAGMISNHLLFKLASGEVFGPDQPISLKLL--GSERSFAALEGVAMELED 97
Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
            ++PLL  VS+  +P   F+DA  A+LIG+ PR   MER++LL IN  IF EQGKALN+V
Sbjct: 98  SLYPLLRQVSIGIDPYEIFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNAV 157
Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           AS +VKV+VVGNP NTN  I +K+AP++  KNF A+ RLD NRA  +LA K       + 
Sbjct: 158 ASPNVKVMVVGNPCNTNALICLKNAPNIPPKNFHALTRLDENRAKCQLALKAGVFYDKVS 217
Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXXX 242
            V +WGNHS +  PD+  A ++G+ + ++I +   W ++ F                   
Sbjct: 218 NVTIWGNHSTTQVPDFLNAKIHGIPVTEVIRDRK-WLEDEFTNMVQTRGGVLIKKWGRSS 276
Query: 243 XXXXXXXXIDHIKDWIFGTE--NWVTMGIPSDGS-YNVPKDIIFGFPVKIK-NSKYKIIQ 298
                   +D I+  +  T   +W + G+ ++G+ Y + +DI+F  P + K +  Y+ ++
Sbjct: 277 AASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGNPYGIAEDIVFSMPCRSKGDGDYEFVK 336
Query: 299 NLEIDKFSRKKINLSIEELKNEILSISHL 327
           ++  D +  KKI  S +EL  E   ++HL
Sbjct: 337 DVIFDDYLSKKIKKSEDELLAEKKCVAHL 365

>pdb|3FI9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Porphyromonas Gingivalis Length = 343

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 17/218 (7%)
Query: 7   RISITGAAGQIGYNIIFRIANGDL---LGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           +++I GAAG IG N+    A   L   L    P  + L            +GV  EI  C
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGL------------EGVAEEIRHC 57
Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
            F  L +++   +   A  DA   +  G  PRK  M R +LL  N+ I  + GK + S  
Sbjct: 58  GFEGL-NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC 116
Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
                V+++ NP +    +T+  +  L     T +  LD  R  ++LA       S +  
Sbjct: 117 PDCKHVIIIFNPADITGLVTLIYS-GLKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTN 175
Query: 184 VFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKN 221
              +G H   M      A VNG  + D+I  +   N+ 
Sbjct: 176 TRTYGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQ 213

>pdb|3GVH|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM Brucella Melitensis Length = 324

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 76  NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135
           N   A + A++ I+    PRK  M R +LL IN  +  + G  +   A  +  V+ + NP
Sbjct: 68  NDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAP-EAFVICITNP 126
Query: 136 VNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMY 195
           ++   +   K +   ++K       LD  R    L+ + N  V  +  VFV G H  SM 
Sbjct: 127 LDAMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVT-VFVLGGHGDSMV 185
Query: 196 PDYRYATVNGVLIRDMI 212
           P  RY+TV G+ + D++
Sbjct: 186 PLARYSTVAGIPLPDLV 202

>pdb|3NEP|X Chain X, 1.55a Resolution Structure Of Malate Dehydrogenase From Salinibacter Ruber Length = 314

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSI-------FIEQGKALNSVASRDVKVLVVGN 134
           +D+++ I+    PR   M R +LLA N+ I       F+E         S D  ++VV N
Sbjct: 68  EDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVE--------GSPDSTIIVVAN 119
Query: 135 PVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSM 194
           P++  TY+  +++   + +       LD  R  + +A +L+  V  + +  + G H  +M
Sbjct: 120 PLDVMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDV-QALLMGGHGDTM 178
Query: 195 YPDYRYATVNGVLIRDMINN 214
            P  RY TV G+ +  +I++
Sbjct: 179 VPLPRYTTVGGIPVPQLIDD 198

>pdb|1HYG|A Chain A, Crystal Structure Of Mj0490 Gene Product, The Family Of LactateMALATE DEHYDROGENASE Length = 313

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/302 (19%), Positives = 122/302 (40%), Gaps = 15/302 (4%)
Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++++I GA+G++G       A   LL K +P +  L+    + S   ++G+  +I D + 
Sbjct: 1   MKVTIIGASGRVGS------ATALLLAK-EPFMKDLVLIGREHSINKLEGLREDIYDALA 53
Query: 66  PLLVDVSVH---ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
               D +++   +  +    ++++ I+    PRK  M R +L   N+ I  +  K +  +
Sbjct: 54  GTRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI 113
Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
              D K+ V+ NPV+  TY  +  +     + F     LD  R    +A      +  + 
Sbjct: 114 C--DTKIFVITNPVDVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEV- 170
Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXXX 242
           +  + G H  SM P     ++ G+ I+            +                    
Sbjct: 171 RTRIIGEHGDSMVPLLSATSIGGIPIQKFERFKELPIDEII--EDVKTKGEQIIRLKGGS 228
Query: 243 XXXXXXXXIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEI 302
                   ++ ++  +   +  +T+    DG ++  +D+  G PVKI     + + ++E+
Sbjct: 229 EFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSIEL 288
Query: 303 DK 304
           DK
Sbjct: 289 DK 290

>pdb|1GV0|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/302 (20%), Positives = 129/302 (42%), Gaps = 20/302 (6%)
Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++I++ GA G +G    FR+A   L    + ++L ++E   +       G  +++ +   
Sbjct: 1   MKITVIGA-GNVGATTAFRLAEKQL--ARELVLLDVVEGIPQ-------GKALDMYESGP 50
Query: 66  PLLVDVSV-HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIE-QGKALNSVA 123
             L D  V   N      +++I ++    PRK  M R +LL++N+ I  E  G+ +    
Sbjct: 51  VGLFDTKVTGSNDYADTANSDIVVITAGLPRKPGMTREDLLSMNAGIVREVTGRIMEH-- 108
Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLR-LDHNRAIAKLASKLNEPVSSIK 182
           S++  ++VV NP++  T++  + +  L  +    M   LD  R  + +A +L   +  + 
Sbjct: 109 SKNPIIVVVSNPLDIMTHVAWQKS-GLPKERVIGMAGVLDSARFRSFIAMELGVSMQDVT 167
Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPXXXXXXXXXXXXXXXXX 242
              V G H  +M P  +Y TV G+ + D+I+        +                    
Sbjct: 168 AC-VLGGHGDAMVPVVKYTTVAGIPVADLISAERI--AELVERTRTGGAEIVNHLKQGSA 224
Query: 243 XXXXXXXXIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEI 302
                   ++ ++  +   +  +T  +  DG Y +    + G PVK+  +  + I  +++
Sbjct: 225 FYSPATSVVEMVESIVLDRKRVLTCAVSLDGQYGIDGTFV-GVPVKLGKNGVEHIYEIKL 283
Query: 303 DK 304
           D+
Sbjct: 284 DQ 285

>pdb|2D4A|A Chain A, Structure Of The Malate Dehydrogenase From Aeropyrum Pernix Length = 308

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 54  KGVIMEIEDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF 112
           +G  +++      L VD+ +   N     + ++I ++     RK  M R +LL  N++  
Sbjct: 37  QGEALDLAHAAAELGVDIRISGSNSYEDMRGSDIVLVTAGIGRKPGMTREQLLEANANTM 96
Query: 113 IEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLRLDHNRAIAKL 170
            +  + + + A +D  V++  NPV+  TY+  K    P      F+ +  LD  R    +
Sbjct: 97  ADLAEKIKAYA-KDAIVVITTNPVDAMTYVMYKKTGFPRERVIGFSGI--LDSARMAYYI 153
Query: 171 ASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN 215
           + KL     S+  + V G H   M+P  R ++V GV +  +++  
Sbjct: 154 SQKLGVSFKSVNAI-VLGMHGQKMFPVPRLSSVGGVPLEHLMSKE 197

>pdb|1GV1|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++I++ GA G +G    FRIA+  L    + ++L ++E   +      KG+ M  E    
Sbjct: 1   MKITVIGA-GNVGATTAFRIADKKL--ARELVLLDVVEGIPQG-----KGLDM-YETGPV 51
Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
            L        N      D++I I+    PRK  M R +LL  N+ I  E    +    S+
Sbjct: 52  GLFDTKITGSNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HSK 110
Query: 126 DVKVLVVGNPVNTNTYIT-MKSAPDLSYKNFTAMLR-LDHNRAIAKLASKLNEPVSSIKK 183
           +  ++VV NP++  T++  ++S   L  +    M   LD  R  + +A +L   +  I  
Sbjct: 111 NPIIIVVSNPLDIMTHVAWVRSG--LPKERVIGMAGVLDAARFRSFIAMELGVSMQDINA 168
Query: 184 VFVWGNHSLSMYPDYRYATVNGVLIRDMI 212
             V G H  +M P  +Y TV G+ I D++
Sbjct: 169 C-VLGGHGDAMVPVVKYTTVAGIPISDLL 196

>pdb|2HJR|A Chain A, Crystal Structure Of Cryptosporidium Parvum Malate Dehydrogenase Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 18/219 (8%)
Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +ISI GA GQIG  I   +   DL       +  ++E          +G  +++  C+  
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDL---GDVYMFDIIEG-------VPQGKALDLNHCMAL 64
Query: 67  LLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA-- 123
           +     +  EN     +++++ I+    PRK NM RS+LL +N+ I    G    +V   
Sbjct: 65  IGSPAKIFGENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIV---GSVAENVGKY 121
Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
             +  V+ + NP++   Y   + +   + K       LD  R    L+  L    S +  
Sbjct: 122 CPNAFVICITNPLDAMVYYFKEKSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSA 181
Query: 184 VFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNV 222
           + V G H   M P     T+ G+L+ D +      +  +
Sbjct: 182 IVV-GGHGDEMIPLTSSVTIGGILLSDFVEQGKITHSQI 219

>pdb|3TL2|A Chain A, Crystal Structure Of Bacillus Anthracis Str. Ames Malate Dehydrogenase In Closed Conformation Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 83  DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVK-------VLVVGNP 135
           D+++ ++     RK  M R +L+A NS I       + S+ +RD+        ++V+ NP
Sbjct: 78  DSDVVVITAGIARKPGMSRDDLVATNSKI-------MKSI-TRDIAKHSPNAIIVVLTNP 129
Query: 136 VNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMY 195
           V+  TY   K A     +       LD  R    +A +LN  V  I   FV G H   M 
Sbjct: 130 VDAMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITG-FVLGGHGDDMV 188
Query: 196 PDYRYATVNGVLIRDMI 212
           P  RY+   G+ +  +I
Sbjct: 189 PLVRYSYAGGIPLETLI 205

>pdb|1GUZ|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++I++ GA G +G    FR+A   L    + ++L ++E   +       G  +++ +   
Sbjct: 1   MKITVIGA-GNVGATTAFRLAEKQL--ARELVLLDVVEGIPQ-------GKALDMYESGP 50
Query: 66  PLLVDVSV-HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
             L D  V   N      +++I I+    PRK  M R +LL  N+ I  E    +    S
Sbjct: 51  VGLFDTKVTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HS 109
Query: 125 RDVKVLVVGNPVNTNTYIT-MKSAPDLSYKNFTAMLR-LDHNRAIAKLASKLNEPVSSIK 182
           ++  ++VV NP++  T++  ++S   L  +    M   LD  R  + +A +L   +  I 
Sbjct: 110 KNPIIIVVSNPLDIMTHVAWVRSG--LPKERVIGMAGVLDAARFRSFIAMELGVSMQDIN 167
Query: 183 KVFVWGNHSLSMYPDYRYATVNGVLIRDMI 212
              V G H  +M P  +Y TV G+ I D++
Sbjct: 168 AC-VLGGHGDAMVPVVKYTTVAGIPISDLL 196

>pdb|1A5Z|A Chain A, Lactate Dehydrogenase From Thermotoga Maritima (tmldh) Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
           P     +++       K +++ I+    P+K    R +LL  N+ +  E  + ++  A  
Sbjct: 50  PFTRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP- 108
Query: 126 DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVF 185
           D  V+VV NPV+  TY  +K +     K F +   LD  R    +A        S+  V+
Sbjct: 109 DSIVIVVTNPVDVLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSV-HVY 167
Query: 186 VWGNHSLSMYPDYRYATVNGVLIRDMIN 213
           V G H  S  P +  A + G+ +++M  
Sbjct: 168 VIGEHGDSEVPVWSGAMIGGIPLQNMCQ 195

>pdb|2A92|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Plasmodium Vivax: Complex With Nadh Length = 321

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 81  FKDANIAILIGSF---PRKSNME--RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135
            K A++ I+   F   P KS+ E  R +LL +N+ I IE G  + ++   +  ++VV NP
Sbjct: 69  LKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNLCP-NAFIIVVTNP 127
Query: 136 VNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMY 195
           V+    +  + +     K       LD +R    ++ KLN     +  + V G H   M 
Sbjct: 128 VDVMVQLLFEHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIV-GAHGNKMV 186
Query: 196 PDYRYATVNGVLIRDMINNNSFWNKNV 222
              RY TV G+ +++ INN    ++ V
Sbjct: 187 LLKRYITVGGIPLQEFINNKKITDEEV 213

>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From Archaeoglobus Fulgidus In Complex With Nadh Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 81  FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT 140
            K + I ++     RK  M R +L   N+ I  +  K +   A  + K+LVV NP++  T
Sbjct: 67  LKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVTNPMDVMT 125
Query: 141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRY 200
           YI  K +     + F    +LD  R   +L    N    +I++ ++ G H  SM+     
Sbjct: 126 YIMWKESGKPRNEVFGMGNQLDSQRLKERL---YNAGARNIRRAWIIGEHGDSMFVAKSL 182
Query: 201 ATVNGVLIRDMINNN 215
           A  +G +  + + N+
Sbjct: 183 ADFDGEVDWEAVEND 197

>pdb|1OC4|A Chain A, Lactate Dehydrogenase From Plasmodium Berghei Length = 322

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 81  FKDANIAILIGSF---PRKSNME--RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135
            KDA++ I+   F   P KS+ E  R +LL +N+ I IE G  + +    +  ++VV NP
Sbjct: 70  LKDADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKN-NCPNAFIIVVTNP 128
Query: 136 VNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMY 195
           V+    +  + +     K       LD +R    ++ KLN     +    + G H   M 
Sbjct: 129 VDVMVQLLHQHSGVPKNKIVGLGGVLDTSRLKYYISQKLNVCPRDVN-AHIVGAHGNKMV 187
Query: 196 PDYRYATVNGVLIRDMINNNSFWNKNV 222
              RY TV G+ +++ INN    ++ +
Sbjct: 188 LLKRYITVGGIPLQEFINNKKITDQEL 214

>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 54  KGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF- 112
           KG  +++ED + P      ++    +  KDA++ ++    P+K    R +L+  N  I  
Sbjct: 48  KGDAIDLEDAL-PFTSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILK 106
Query: 113 ------IEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRA 166
                 ++ G   N +       LV  NPV+  TY T K +     +   +   LD  R 
Sbjct: 107 SIVDPIVDSG--FNGI------FLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARF 158
Query: 167 IAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMI 212
              +A  +N    S+   ++ G H  + +P + +A + GV I + +
Sbjct: 159 RQSIAKMVNVDARSV-HAYIMGEHGDTEFPVWSHANIGGVTIAEWV 203

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	329
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	1e-160
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	1e-154
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	1e-147
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	1e-145
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	1e-109
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	6e-23
3tl2_A	315	Malate dehydrogenase; center for structural genomi	5e-20
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	6e-20
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	8e-20
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	2e-19
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	5e-19
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	5e-19
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	5e-19
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	9e-19
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	2e-18
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	3e-18
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	3e-18
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	4e-18
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	1e-17
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	6e-17
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	5e-16
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	5e-16
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	6e-16
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	8e-16
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	2e-15
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	2e-15
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	3e-15
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	3e-14
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	3e-14
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	8e-14
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	2e-13
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	2e-13
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	7e-13
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	1e-08
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	6e-08

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Length = 329

 Score =  449 bits (1158), Expect = e-160
 Identities = 199/329 (60%), Positives = 266/329 (80%), Gaps = 2/329 (0%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K P+R+++TGAAGQI Y+++FRIANGD+LGKDQP+ILQLLE  N+K+QKA++GV+MEI
Sbjct: 1   MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI 60

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           +DC FPLL  ++ H +P+TAFKDA++A+L+G+ PR   MER +LL  N+ IF  QGKA++
Sbjct: 61  DDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID 120

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VASR++KVLVVGNP NTN YI MKSAP L  KNFTAMLRLDHNRA++++A+K  +PVSS
Sbjct: 121 AVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSS 180

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           I+K+FVWGNHS +MY DYRYA ++G  ++DMIN+++ WN++ FLP + +RG  II  RG 
Sbjct: 181 IEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDA-WNRDTFLPTVGKRGAAIIDARGV 239

Query: 241 SSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SSAASAA+AAIDHI DW+ GT   W TMGIPSDGSY +P+ +IFGFPV  +N +YKI+Q 
Sbjct: 240 SSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQG 299

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHLI 328
           L ID FS+++IN+++ EL  E   + HL+
Sbjct: 300 LSIDAFSQERINVTLNELLEEQNGVQHLL 328

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Length = 327

 Score =  433 bits (1116), Expect = e-154
 Identities = 169/328 (51%), Positives = 243/328 (74%), Gaps = 6/328 (1%)

Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLLE    ++ KA++GV+ME+E
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE--IPQAMKALEGVVMELE 58

Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           DC FPLL  +   ++P  AFKDA+ A+L+G+ PRK+ MER +LL +N  IF EQG+AL  
Sbjct: 59  DCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118

Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181
           VA +DVKVLVVGNP NTN  I  K+AP L+ +NFTAM RLDHNRA A+LA K    V  I
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRI 178

Query: 182 KKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS 241
           +++ VWGNHS +M+PD  +A V+G    ++++    W + VF+P +++RG  II  RGAS
Sbjct: 179 RRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME--WYEKVFIPTVAQRGAAIIQARGAS 236

Query: 242 SAASAASAAIDHIKDWIFGTE--NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQN 299
           SAASAA+AAI+HI+DW  GT   +WV+M +PS G Y +P+ I++ FPV  K+  Y++++ 
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296

Query: 300 LEIDKFSRKKINLSIEELKNEILSISHL 327
           LEI++F+RK++ ++ +EL +E+  +  L
Sbjct: 297 LEINEFARKRMEITAQELLDEMEQVKAL 324

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* Length = 375

 Score =  419 bits (1078), Expect = e-147
 Identities = 135/332 (40%), Positives = 208/332 (62%), Gaps = 7/332 (2%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
             KK V I+++GAAG I  +++F++A+G++ G+DQPI L+LL   +++S +A++GV ME+
Sbjct: 28  SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLG--SERSFQALEGVAMEL 85

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           ED ++PLL +VS+  +P   F+D + A+LIG+ PR   MER+ LL IN  IF +QGKALN
Sbjct: 86  EDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALN 145

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSS 180
           +VAS++VKVLVVGNP NTN  I +K+APD+  KNF A+ RLD NRA  +LA K       
Sbjct: 146 AVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDK 205

Query: 181 IKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240
           +  V +WGNHS +  PD+  A ++G  ++++I     W +  F   + +RG  +I   G 
Sbjct: 206 VSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTK-WLEEEFTITVQKRGGALIQKWGR 264

Query: 241 SSAASAASAAIDHIKDWIFGTE--NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKI 296
           SSAAS A +  D IK  +  T   +W + G+ + G+ Y + +DI+F  P +   +  Y++
Sbjct: 265 SSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYEL 324

Query: 297 IQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
             ++  D F  ++I  S  EL  E   ++HL 
Sbjct: 325 ATDVSNDDFLWERIKKSEAELLAEKKCVAHLT 356

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* Length = 333

 Score =  412 bits (1060), Expect = e-145
 Identities = 149/332 (44%), Positives = 210/332 (63%), Gaps = 10/332 (3%)

Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+         + GV+ME++DC
Sbjct: 2   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLD--ITPMMGVLDGVLMELQDC 59

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
             PLL DV   +    AFKD ++AIL+GS PR+  MER +LL  N  IF  QG AL+  A
Sbjct: 60  ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 119

Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
            + VKV+VVGNP NTN     KSAP +  +NF+ + RLDHNRA A++A KL      +K 
Sbjct: 120 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKN 179

Query: 184 VFVWGNHSLSMYPDYRYATVNG----VLIRDMINNNSFWNKNVFLPAISRRGEEIISIRG 239
           V +WGNHS + YPD  +A V      V + + + ++S W K  F+  + +RG  +I  R 
Sbjct: 180 VIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDS-WLKGEFITTVQQRGAAVIKARK 238

Query: 240 ASSAASAASAAIDHIKDWIFGTEN--WVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKYKI 296
            SSA SAA A  DH++D  FGT    +V+MGI SDG SY VP D+++ FPV IK+  +KI
Sbjct: 239 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKI 298

Query: 297 IQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
           ++ L I+ FSR+K++L+ +EL  E  +    +
Sbjct: 299 VEGLPINDFSREKMDLTAKELAEEKETAFEFL 330

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Length = 343

 Score =  319 bits (820), Expect = e-109
 Identities = 76/327 (23%), Positives = 126/327 (38%), Gaps = 16/327 (4%)

Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
              +++I GAAG IG N+    A   L   +    L L +         ++GV  EI  C
Sbjct: 7   TEEKLTIVGAAGMIGSNMAQTAAMMRL-TPN----LCLYDPF----AVGLEGVAEEIRHC 57

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
            F  L +++   +   A  DA   +  G  PRK  M R +LL  N+ I  + GK + S  
Sbjct: 58  GFEGL-NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC 116

Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKK 183
                V+++ NP +    +T+  +  L     T +  LD  R  ++LA       S +  
Sbjct: 117 PDCKHVIIIFNPADITGLVTLIYSG-LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTN 175

Query: 184 VFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNV--FLPAISRRGEEIISIRGAS 241
              +G H   M      A VNG  + D+I  +   N+        + + G  II +RG S
Sbjct: 176 TRTYGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLRGRS 235

Query: 242 SAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL 300
           S  S +  +I+ I+  + G       G   +      + I+      I K+       N 
Sbjct: 236 SFQSPSYVSIEMIRAAMGGEAFRWPAGCYVNV-PGF-EHIMMAMETTITKDGVKHSDINQ 293

Query: 301 EIDKFSRKKINLSIEELKNEILSISHL 327
             ++  R  +  S   L      +  +
Sbjct: 294 LGNEAERAALKESYSHLAKLRDEVIAM 320

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Length = 313

 Score = 95.7 bits (239), Expect = 6e-23
 Identities = 67/343 (19%), Positives = 136/343 (39%), Gaps = 51/343 (14%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++++I GA+G++G      +A    +     ++L           K  +G+  +I D + 
Sbjct: 1   MKVTIIGASGRVGSATALLLAKEPFMKD---LVLIGR---EHSINKL-EGLREDIYDALA 53

Query: 66  PLLVDVSVH---ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
               D +++   +  +    ++++ I+    PRK  M R +L   N+ I      A    
Sbjct: 54  GTRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIV--GKYAKKIA 111

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKL 170
              D K+ V+ NPV+  TY  +  +            + + N+                +
Sbjct: 112 EICDTKIFVITNPVDVMTYKALVDS------------KFERNQVFGLGTHLDSLRFKVAI 159

Query: 171 ASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR 230
           A      +  + +  + G H  SM P     ++ G+ I+          K + +  I   
Sbjct: 160 AKFFGVHIDEV-RTRIIGEHGDSMVPLLSATSIGGIPIQKFER-----FKELPIDEIIED 213

Query: 231 ----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGF 285
               GE+II ++G S    AA+    ++   I   E  + T+    DG ++  +D+  G 
Sbjct: 214 VKTKGEQIIRLKGGSEFGPAAAIL--NVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIGV 271

Query: 286 PVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           PVKI ++   +++ ++E+DK        S E +K     + +L
Sbjct: 272 PVKIGRDGIEEVV-SIELDKDEIIAFRKSAEIIKKYCEEVKNL 313

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Length = 315

 Score = 87.9 bits (219), Expect = 5e-20
 Identities = 83/346 (23%), Positives = 141/346 (40%), Gaps = 57/346 (16%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVI 57
           M  K  ++S+ GA G  G    F +A     D++  D            +      KG  
Sbjct: 4   MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVD----------IPQLENPT-KGKA 51

Query: 58  MEIEDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQG 116
           +++ +       D ++   +      D+++ ++     RK  M R +L+A NS I     
Sbjct: 52  LDMLEASPVQGFDANIIGTSDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSIT 111

Query: 117 KALNSVASRDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLR-------LDHNRAI 167
           + +   +  +  ++V+ NPV+  TY   K A  P    K      R       LD  R  
Sbjct: 112 RDIAKHSP-NAIIVVLTNPVDAMTYSVFKEAGFP----KE-----RVIGQSGVLDTARFR 161

Query: 168 AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI 227
             +A +LN  V  I   FV G H   M P  RY+   G+ +  +I           L AI
Sbjct: 162 TFIAQELNLSVKDI-TGFVLGGHGDDMVPLVRYSYAGGIPLETLIPKER-------LEAI 213

Query: 228 SRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPK 279
             R    G EI+ + G  SA  A +A++  + + I   +  V   +P+    +G Y    
Sbjct: 214 VERTRKGGGEIVGLLGNGSAYYAPAASLVEMTEAILKDQRRV---LPAIAYLEGEYGY-S 269

Query: 280 DIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
           D+  G PV +  N   KII  LE+    ++ ++ S+E ++N +  +
Sbjct: 270 DLYLGVPVILGGNGIEKII-ELELLADEKEALDRSVESVRNVMKVL 314

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Length = 321

 Score = 87.6 bits (218), Expect = 6e-20
 Identities = 59/265 (22%), Positives = 114/265 (43%), Gaps = 35/265 (13%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY 141
           +++++ I+    PRK  M R +LL IN  +    G+ +      +  V+ + NP++    
Sbjct: 72  ENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCP-NAFVICITNPLDIMVN 130

Query: 142 ITMKSA--PDLSYKNFTAMLR-------LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL 192
           +  K +  P     N     +       LD  R    LA +LN  V  + + +V G H  
Sbjct: 131 MLQKFSGVP----DN-----KIVGMAGVLDSARFRTFLADELNVSVQQV-QAYVMGGHGD 180

Query: 193 SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASSAASAAS 248
           +M P  + + V GV +  ++       +   L AI  R    G EI+++    SA  A +
Sbjct: 181 TMVPLTKMSNVAGVSLEQLVKEGKLKQER--LDAIVSRTRSGGGEIVALLKTGSAYYAPA 238

Query: 249 AAIDHIKDWIFGTENWVTMGIPS-----DGSYNVPKDIIFGFPVKIKNSKYKIIQNLEID 303
           AA   + +     +  +   +P       G Y + +D+  G P +I  +  + I  +EI 
Sbjct: 239 AAGIQMAESFLKDKKMI---LPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EVEIS 294

Query: 304 KFSRKKINLSIEELKNEILSISHLI 328
              R+++ +SI  +K+   + + ++
Sbjct: 295 DKEREQLQVSINAIKDLNKAAAEIL 319

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Length = 328

 Score = 87.6 bits (218), Expect = 8e-20
 Identities = 69/349 (19%), Positives = 131/349 (37%), Gaps = 54/349 (15%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
            +    +ISI GA GQIG  I   +   DL       +  ++E          +G  +++
Sbjct: 10  TVIMRKKISIIGA-GQIGSTIALLLGQKDL---GDVYMFDIIEG------VP-QGKALDL 58

Query: 61  EDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKAL 119
             C+  +     +  EN     +++++ I+    PRK NM RS+LL +N+ I     + +
Sbjct: 59  NHCMALIGSPAKIFGENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENV 118

Query: 120 NSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------ 167
                 +  V+ + NP++   Y   + +             +  N+              
Sbjct: 119 GKYCP-NAFVICITNPLDAMVYYFKEKS------------GIPANKVCGMSGVLDSARFR 165

Query: 168 AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI 227
             L+  L    S +    V G H   M P     T+ G+L+ D +      +    +  I
Sbjct: 166 CNLSRALGVKPSDVS-AIVVGGHGDEMIPLTSSVTIGGILLSDFVEQGKITHSQ--INEI 222

Query: 228 SRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPK 279
            ++    G EI+ +    SA  A +A+   +          V   +       G YNV  
Sbjct: 223 IKKTAFGGGEIVELLKTGSAFYAPAASAVAMAQAYLKDSKSV---LVCSTYLTGQYNV-N 278

Query: 280 DIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           ++  G PV I KN    ++  + +    +   + S+E ++N +  +  L
Sbjct: 279 NLFVGVPVVIGKNGIEDVVI-VNLSDDEKSLFSKSVESIQNLVQDLKSL 326

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Length = 314

 Score = 86.4 bits (215), Expect = 2e-19
 Identities = 74/341 (21%), Positives = 145/341 (42%), Gaps = 53/341 (15%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++++ GA G +G  +   +A  D+  K+    + +++  +   Q    G  +++ +   
Sbjct: 1   MKVTVIGA-GNVGATVAECVARQDV-AKE----VVMVDIKDGMPQ----GKALDMRESSP 50

Query: 66  PLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
               D  V   N     +D+++ I+    PR   M R +LLA N+ I     +     + 
Sbjct: 51  IHGFDTRVTGTNDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSP 110

Query: 125 RDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLR-------LDHNRAIAKLASKLN 175
            D  ++VV NP++  TY+  +++  P     N     R       LD  R  + +A +L+
Sbjct: 111 -DSTIIVVANPLDVMTYVAYEASGFP----TN-----RVMGMAGVLDTGRFRSFIAEELD 160

Query: 176 EPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----G 231
             V  + +  + G H  +M P  RY TV G+ +  +I++         +  I  R    G
Sbjct: 161 VSVRDV-QALLMGGHGDTMVPLPRYTTVGGIPVPQLIDDAR-------IEEIVERTKGAG 212

Query: 232 EEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPKDIIFGFPV 287
            EI+ + G  SA  A  AA   + + I      +   +P     DG Y +  D+  G PV
Sbjct: 213 GEIVDLMGT-SAWYAPGAAAAEMTEAILKDNKRI---LPCAAYCDGEYGL-DDLFIGVPV 267

Query: 288 KI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           K+      ++I  +++D   + ++  S   + + +  +  L
Sbjct: 268 KLGAGGVEEVI-EVDLDADEKAQLKTSAGHVHSNLDDLQRL 307

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Length = 331

 Score = 85.3 bits (212), Expect = 5e-19
 Identities = 71/360 (19%), Positives = 134/360 (37%), Gaps = 70/360 (19%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIAN---GDLL------GKDQPIILQLLEASN-KKSQ 50
           ++++  ++++ G+ G IG  + +  A     D++      G  +   L L   ++   + 
Sbjct: 5   LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTN 63

Query: 51  KAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNME-----RSELL 105
            +++                             A+  I+     +          R++LL
Sbjct: 64  VSVRAEYSYEAAL------------------TGADCVIVTAGLTKVPGKPDSEWSRNDLL 105

Query: 106 AINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLR--- 160
             NS I  E G+ +         ++VV NP++    +  +++  P     N         
Sbjct: 106 PFNSKIIREIGQNIKK-YCPKTFIIVVTNPLDCMVKVMCEASGVP----TN-----MICG 155

Query: 161 ----LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS 216
               LD  R    +A  L+     ++   V G H   M P  RY TVNG  I+  I +  
Sbjct: 156 MACMLDSGRFRRYVADALSVSPRDVQ-ATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGV 214

Query: 217 FWNKNVFLPAISRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS- 271
              K   L  I+      G EI+   G  SA  A +A+   +       E  V   IP  
Sbjct: 215 VTEKQ--LEEIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKRV---IPCS 269

Query: 272 ---DGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
              +G Y + KD+  G P  I      ++I  LE+++  +K+   S++++     +++ L
Sbjct: 270 VYCNGEYGL-KDMFIGLPAVIGGAGIERVI-ELELNEEEKKQFQKSVDDVMALNKAVAAL 327

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Length = 324

 Score = 85.2 bits (212), Expect = 5e-19
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 36/264 (13%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY 141
           + A++ I+    PRK  M R +LL IN  +  + G  +   A  +  V+ + NP++   +
Sbjct: 74  EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAP-EAFVICITNPLDAMVW 132

Query: 142 ITMKSA--PDLSYKNFTAMLR-------LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL 192
              K +  P     +     +       LD  R    L+ + N  V  +  VFV G H  
Sbjct: 133 ALQKFSGLP----AH-----KVVGMAGVLDSARFRYFLSEEFNVSVEDVT-VFVLGGHGD 182

Query: 193 SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASSAASAAS 248
           SM P  RY+TV G+ + D++     W     L  I +R    G EI+ +    SA  A +
Sbjct: 183 SMVPLARYSTVAGIPLPDLVKMG--WTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPA 240

Query: 249 AAIDHIKDWIFGTENWVTMGIPS----DGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEID 303
           A+   + +     +  V   +P      G Y V KD+  G P  I  N   +II  +++D
Sbjct: 241 ASAIQMAESYLKDKKRV---LPVAAQLSGQYGV-KDMYVGVPTVIGANGVERII-EIDLD 295

Query: 304 KFSRKKINLSIEELKNEILSISHL 327
           K  + + + S+  +     +   +
Sbjct: 296 KDEKAQFDKSVASVAGLCEACIGI 319

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Length = 309

 Score = 84.9 bits (211), Expect = 5e-19
 Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 62/349 (17%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVI 57
           M KK   ISI GA G +G      +A    GD++         LL+      Q    G  
Sbjct: 1   MRKK---ISIIGA-GFVGSTTAHWLAAKELGDIV---------LLDIVEGVPQ----GKA 43

Query: 58  MEIEDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQG 116
           +++ +       DV V   N      ++++ ++    PRK  M R +L+ +N+ I     
Sbjct: 44  LDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACI 103

Query: 117 KALNSVASRDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLR-------LDHNRAI 167
                ++  +  +++V NP++  TY+  + +  P    K      R       LD  R  
Sbjct: 104 SQAAPLSP-NAVIIMVNNPLDAMTYLAAEVSGFP----KE-----RVIGQAGVLDAARYR 153

Query: 168 AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI 227
             +A +    V  ++   + G H   M P  R++ ++G+ + + I  +        L  I
Sbjct: 154 TFIAMEAGVSVEDVQ-AMLMGGHGDEMVPLPRFSCISGIPVSEFIAPDR-------LAQI 205

Query: 228 SRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPK 279
             R    G EI+++    SA  A +AA   + + +   +  V   +P      G Y +  
Sbjct: 206 VERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRV---MPVAAYLTGQYGL-N 261

Query: 280 DIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           DI FG PV +      KI+  L +++     +N S + ++  + ++  L
Sbjct: 262 DIYFGVPVILGAGGVEKIL-ELPLNEEEMALLNASAKAVRATLDTLKSL 309

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Length = 310

 Score = 84.1 bits (209), Expect = 9e-19
 Identities = 76/342 (22%), Positives = 137/342 (40%), Gaps = 52/342 (15%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++I++ GA G +G    FR+A   L  ++    L LL+      Q    G  +++ +   
Sbjct: 1   MKITVIGA-GNVGATTAFRLAEKQL-ARE----LVLLDVVEGIPQ----GKALDMYESGP 50

Query: 66  PLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
             L D  V   N      +++I I+    PRK  M R +LL  N+ I  E    +   + 
Sbjct: 51  VGLFDTKVTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK 110

Query: 125 RDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLR-------LDHNRAIAKLASKLN 175
            +  ++VV NP++  T++    +  P    K      R       LD  R  + +A +L 
Sbjct: 111 -NPIIIVVSNPLDIMTHVAWVRSGLP----KE-----RVIGMAGVLDAARFRSFIAMELG 160

Query: 176 EPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----G 231
             +  I    V G H  +M P  +Y TV G+ I D++   +       +  +  R    G
Sbjct: 161 VSMQDIN-ACVLGGHGDAMVPVVKYTTVAGIPISDLLPAET-------IDKLVERTRNGG 212

Query: 232 EEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPKDIIFGFPV 287
            EI+      SA  A ++++  + + I      V   +P     +G Y +      G PV
Sbjct: 213 AEIVEHLKQGSAFYAPASSVVEMVESIVLDRKRV---LPCAVGLEGQYGI-DKTFVGVPV 268

Query: 288 KI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
           K+ +N   +I   + +D+     +  S + +      +   I
Sbjct: 269 KLGRNGVEQIY-EINLDQADLDLLQKSAKIVDENCKMLESTI 309

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Length = 314

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 70/330 (21%), Positives = 123/330 (37%), Gaps = 43/330 (13%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           ++++ GA+G IG  +   + N  L+ +     L L + ++        GV  ++      
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSR-----LTLYDIAH------TPGVAADLSHIETR 50

Query: 67  LLVDVSVHENPI-TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
             V   +    +    K  ++ ++    PRK  M R +L   N++I      A       
Sbjct: 51  ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCP- 109

Query: 126 DVKVLVVGNPVNTNTYIT---MKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
           D  + ++ NPVN+   IT    K     +      +  LD  RA A +A       + + 
Sbjct: 110 DAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARV- 168

Query: 183 KVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEII-S 236
            V V G H+  ++ P     T      +D ++             ++ R    G E++ +
Sbjct: 169 SVPVIGGHAGKTIIPLISQCTPKVDFPQDQLS------------TLTGRIQEAGTEVVKA 216

Query: 237 IRGASSA----ASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKI-KN 291
             GA SA    A A +  +  + D + G E  V          + P    F  P+ + K 
Sbjct: 217 KAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCP---YFSTPLLLGKK 273

Query: 292 SKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
              K +   +I  F  K I  +I ELK  I
Sbjct: 274 GIEKNLGIGKISPFEEKMIAEAIPELKASI 303

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Length = 317

 Score = 82.9 bits (206), Expect = 3e-18
 Identities = 68/346 (19%), Positives = 123/346 (35%), Gaps = 55/346 (15%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVI 57
           M+++  +I++ G+ GQIG NI + +      D++         L + +    Q    G  
Sbjct: 1   MIERR-KIAVIGS-GQIGGNIAYIVGKDNLADVV---------LFDIAEGIPQ----GKA 45

Query: 58  MEIEDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQG 116
           ++I   +        V   +       +++ I+  S P +   +RSELL  N+ I     
Sbjct: 46  LDITHSMVMFGSTSKVIGTDDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVA 105

Query: 117 KALNSVASRDVKVLVVGNPVNTNTYITMKSA--PDLSYKNFTAMLR-------LDHNRAI 167
           + +      +  V+ + NP++       K +  P     N     +       LD +R  
Sbjct: 106 EGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLP----HN-----KVCGMAGVLDSSRFR 155

Query: 168 AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI 227
             +A       S +    V G H   M P     +V GV +   I       +   +  I
Sbjct: 156 TFIAQHFGVNASDVS-ANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQ--IDEI 212

Query: 228 SRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPK 279
                   +E+       +A  A +AA   + +     +  V   +P        Y V K
Sbjct: 213 VCHTRIAWKEVADNLKTGTAYFAPAAAAVKMAEAYLKDKKAV---VPCSAFCSNHYGV-K 268

Query: 280 DIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
            I  G P  I KN    I+  L++    +K +  SI E+      +
Sbjct: 269 GIYMGVPTIIGKNGVEDIL-ELDLTPLEQKLLGESINEVNTISKVL 313

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* Length = 312

 Score = 82.6 bits (205), Expect = 3e-18
 Identities = 62/333 (18%), Positives = 127/333 (38%), Gaps = 47/333 (14%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++++ GAAG IG  +   +      G +    L L + +         GV +++     
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIAP-----VTPGVAVDLSHIPT 51

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
            + +     E+   A + A++ ++     RK  M+RS+L  +N+ I     + +      
Sbjct: 52  AVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP- 110

Query: 126 DVKVLVVGNPVNTNTYI---TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIK 182
              + ++ NPVNT   I    +K A          +  LD  R+   +A    +    + 
Sbjct: 111 KACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEV- 169

Query: 183 KVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISI 237
           +V V G HS +++ P    + V GV   +             +  +++R    G E++  
Sbjct: 170 EVPVIGGHSGVTILP--LLSQVPGVSFTEQE-----------VADLTKRIQNAGTEVVEA 216

Query: 238 R-GASSA----ASAASAAIDHIKDWIFGTENWVTMGIPSDGSY---NVPKDIIFGFPVKI 289
           + G  SA      AA+     +   + G +  V      + +Y   +      F  P+ +
Sbjct: 217 KAGGGSATLSMGQAAARFGLSLVRALQGEQGVV------ECAYVEGDGQYARFFSQPLLL 270

Query: 290 -KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            KN   +      +  F +  +   ++ LK +I
Sbjct: 271 GKNGVEERKSIGTLSAFEQNALEGMLDTLKKDI 303

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Length = 308

 Score = 82.6 bits (205), Expect = 4e-18
 Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 48/269 (17%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY 141
           + ++I ++     RK  M R +LL  N++   +  + + + A  D  V++  NPV+  TY
Sbjct: 66  RGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAK-DAIVVITTNPVDAMTY 124

Query: 142 ITMKSAPDLSYKNFTAMLRLDHNRAI------------AKLASKLNEPVSSIKKVFVWGN 189
           +  K                   R I              ++ KL     S+    V G 
Sbjct: 125 VMYKKT------------GFPRERVIGFSGILDSARMAYYISQKLGVSFKSV-NAIVLGM 171

Query: 190 HSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASSAAS 245
           H   M+P  R ++V GV +  +++          +  +       G +I  +RG  S+  
Sbjct: 172 HGQKMFPVPRLSSVGGVPLEHLMSKEE-------IEEVVSETVNAGAKITELRG-YSSNY 223

Query: 246 AASAAIDHIKDWIFGTENWVTMGIPS----DGSYNVPKDIIFGFPVKI-KNSKYKIIQNL 300
             +A +    + I      +    P      G Y    DI+   P  I K+   +II  L
Sbjct: 224 GPAAGLVLTVEAIKRDSKRI---YPYSLYLQGEYGY-NDIVAEVPAVIGKSGIERII-EL 278

Query: 301 EIDKFSRKKINLSIEELKNEILSISHLIR 329
            + +  ++K + +++ +K  + ++   +R
Sbjct: 279 PLTEDEKRKFDEAVQAVKKLVETLPPQLR 307

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Length = 322

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 71/356 (19%), Positives = 126/356 (35%), Gaps = 68/356 (19%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVI 57
           M  K  +I + G+ G IG  +   I     GD++         L +           G  
Sbjct: 1   MAPKA-KIVLVGS-GMIGGVMATLIVQKNLGDVV---------LFDIVKNMPH----GKA 45

Query: 58  MEIEDCIFPLLVDVSVH-ENPITAFKDANIAILIGSFPRKSNM-----ERSELLAINSSI 111
           ++          +  V   N       A++ I+   F +          R +LL +N+ I
Sbjct: 46  LDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKI 105

Query: 112 FIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI---- 167
            IE G  +      +  ++VV NPV+    +  + +             +  N+ I    
Sbjct: 106 MIEIGGHIKK-NCPNAFIIVVTNPVDVMVQLLHQHS------------GVPKNKIIGLGG 152

Query: 168 --------AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
                     ++ KLN     +    + G H   M    RY TV G+ +++ INN     
Sbjct: 153 VLDTSRLKYYISQKLNVCPRDVN-AHIVGAHGNKMVLLKRYITVGGIPLQEFINNK--LI 209

Query: 220 KNVFLPAISRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPS---- 271
            +  L AI  R      EI+++  +   A AA+     + +        V   +      
Sbjct: 210 SDAELEAIFDRTVNTALEIVNLHASPYVAPAAAII--EMAESYLKDLKKV---LICSTLL 264

Query: 272 DGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISH 326
           +G Y    DI  G PV +  N   ++I+ L+++   + K + +I E K       H
Sbjct: 265 EGQYGH-SDIFGGTPVVLGANGVEQVIE-LQLNSEEKAKFDEAIAETKRMKALAHH 318

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Length = 303

 Score = 78.7 bits (195), Expect = 6e-17
 Identities = 54/340 (15%), Positives = 116/340 (34%), Gaps = 59/340 (17%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           ++S+ GAAG +G    + IA  D+   D+ + + + +  +        G   +    I  
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIA--DEVVFVDIPDKEDD-----TVGQAADTNHGI-A 53

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNSVA 123
              +  V +        +++ ++    PR+    R +L   N+ I               
Sbjct: 54  YDSNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE----H 109

Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKLA 171
           + D   L   NPV+       +                   + I              L+
Sbjct: 110 NDDYISLTTSNPVDLLNRHLYE----AG--------DRSREQVIGFGGRLDSARFRYVLS 157

Query: 172 SKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR- 230
            + + PV ++ +  + G H  +  P +   +V+G       +             +    
Sbjct: 158 EEFDAPVQNV-EGTILGEHGDAQVPVFSKVSVDGTDPEFSGDE---------KEQLLGDL 207

Query: 231 ---GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFP 286
                ++I  +GA+    A   A  H+ + I      V    +  +G +   +D  FG P
Sbjct: 208 QESAMDVIERKGATEWGPARGVA--HMVEAILHDTGEVLPASVKLEGEFGH-EDTAFGVP 264

Query: 287 VKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
           V +  N   +I+   ++D + +  +  + E+L ++   IS
Sbjct: 265 VSLGSNGVEEIV-EWDLDDYEQDLMADAAEKLSDQYDKIS 303

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score = 76.4 bits (189), Expect = 5e-16
 Identities = 68/348 (19%), Positives = 131/348 (37%), Gaps = 53/348 (15%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M+K   +++I GA G +G +  F +A      +     L L++   +K+     G  M+I
Sbjct: 3   MVKSRSKVAIIGA-GFVGASAAFTMALRQTANE-----LVLIDVFKEKA----IGEAMDI 52

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGK 117
              + P +  +S++    +  KD ++ ++     RK    R +L   N  I     +   
Sbjct: 53  NHGL-PFMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIM 111

Query: 118 ALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI---------- 167
                      +LVV NPV+  TY+  K     S         L   + I          
Sbjct: 112 K----YYNHGVILVVSNPVDIITYMIQK----WS--------GLPVGKVIGSGTVLDSIR 155

Query: 168 --AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLP 225
               L+ KL   V ++   ++ G H  S  P +    + G  I + I++           
Sbjct: 156 FRYLLSEKLGVDVKNVH-GYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKK 214

Query: 226 AISRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKD 280
            I+      G  II  +GA+    A S     I + +   +N + T+G   +G Y + +D
Sbjct: 215 KIAEDVKTAGATIIKNKGATYYGIAVSIN--TIVETLLKNQNTIRTVGTVINGMYGI-ED 271

Query: 281 IIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           +    P  +      +++    +     + +  S E++K  +  + +L
Sbjct: 272 VAISLPSIVNSEGVQEVL-QFNLTPEEEEALRFSAEQVKKVLNEVKNL 318

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Length = 319

 Score = 76.4 bits (189), Expect = 5e-16
 Identities = 69/341 (20%), Positives = 133/341 (39%), Gaps = 54/341 (15%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           ++I I G  G++G +  F +         + +++ + +       +A +G  +++     
Sbjct: 1   MKIGIVGL-GRVGSSTAFALLMKGFA--REMVLIDVDKK------RA-EGDALDLIHGT- 49

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNSV 122
           P     +++       K +++ I+    P+K    R +LL  N+ +              
Sbjct: 50  PFTRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSK---- 105

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKL 170
            + D  V+VV NPV+  TY  +K     S         +D  +                +
Sbjct: 106 YAPDSIVIVVTNPVDVLTYFFLK----ES--------GMDPRKVFGSGTVLDTARLRTLI 153

Query: 171 ASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR 230
           A        S+  V+V G H  S  P +  A + G+ +++M       +  + L   + +
Sbjct: 154 AQHCGFSPRSVH-VYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCDSKI-LENFAEK 211

Query: 231 ----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGF 285
                 EII  +GA+  A A + A   I + IF  E  V T+ +  +    V KD+    
Sbjct: 212 TKRAAYEIIERKGATHYAIALAVA--DIVESIFFDEKRVLTLSVYLEDYLGV-KDLCISV 268

Query: 286 PVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
           PV + K+   +I+  L +++   +    S   LKN I  I+
Sbjct: 269 PVTLGKHGVERIL-ELNLNEEELEAFRKSASILKNAINEIT 308

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Length = 331

 Score = 76.4 bits (189), Expect = 6e-16
 Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 41/264 (15%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNSVASRDVKVLVVGNPVNT 138
            ++ + I+     ++    R  L+  N +IF   I          S   K+L+V NPV+ 
Sbjct: 86  ANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVK----YSPQCKLLIVSNPVDI 141

Query: 139 NTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKLASKLNEPVSSIKKVFV 186
            TY+  K    +S            NR I              +  +L     S    +V
Sbjct: 142 LTYVAWK----IS--------GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSC-HGWV 188

Query: 187 WGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEEIISIRGASS 242
            G H  S  P +    V GV ++ +               + ++      E+I ++G +S
Sbjct: 189 LGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLKGYTS 248

Query: 243 AASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL 300
            A   S A   + + I      V  +     G Y + +D+    P  + +N    ++  +
Sbjct: 249 WAIGLSVA--DLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVV-KV 305

Query: 301 EIDKFSRKKINLSIEELKNEILSI 324
            +      ++  S + L      +
Sbjct: 306 TLTPDEEARLKKSADTLWGIQKEL 329

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Length = 326

 Score = 75.7 bits (187), Expect = 8e-16
 Identities = 64/337 (18%), Positives = 123/337 (36%), Gaps = 49/337 (14%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
               +++I GAAG IG  +   +    L+      +  ++ A          GV  +I  
Sbjct: 6   APGFKVAILGAAGGIGQPLAMLMKMNPLV--SVLHLYDVVNA---------PGVTADISH 54

Query: 63  CIFPLLVDVSVHENPIT-AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
                +V   + +  +  A    ++ I+    PRK  M R +L  IN+ I     + +  
Sbjct: 55  MDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK 114

Query: 122 VASRDVKVLVVGNPVNTNTYIT---MKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPV 178
                  V ++ NPVN+   I     K A     K    +  LD  RA   +A  L    
Sbjct: 115 CCP-RAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDP 173

Query: 179 SSIKKVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----GEE 233
             +  V V G H+ +++ P            ++ I+             ++ R    G E
Sbjct: 174 RDVD-VPVVGGHAGVTILPLLSQVKPPSSFTQEEIS------------YLTDRIQNGGTE 220

Query: 234 IISIR-GASSA--ASAASAA--IDHIKDWIFGTENWVTMGIPSDGSY---NVPKDIIFGF 285
           ++  + GA SA  + A +A    D     + G    +      + ++    V +   F  
Sbjct: 221 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVI------ECAFVSSQVTELPFFAS 274

Query: 286 PVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            V++ +N   ++     ++++ R  +  + +EL   I
Sbjct: 275 KVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSI 311

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Length = 326

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 67/342 (19%), Positives = 131/342 (38%), Gaps = 54/342 (15%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
             K   ++ + G  G +G +  + +    +    +  I+ + +       K  KG  +++
Sbjct: 5   TDKDHQKVILVGD-GAVGSSYAYAMVLQGIA--QEIGIVDIFKD------KT-KGDAIDL 54

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGK 117
            + + P      ++    +  KDA++ ++    P+K    R +L+  N  I    ++   
Sbjct: 55  SNAL-PFTSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIV 113

Query: 118 ALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI---------- 167
                +  +   LV  NPV+  TY T K    LS            NR +          
Sbjct: 114 D----SGFNGIFLVAANPVDILTYATWK----LS--------GFPKNRVVGSGTSLDTAR 157

Query: 168 --AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLP 225
               +A  +N    S+   ++ G H  + +P + +A + GV I + +  +    ++  L 
Sbjct: 158 FRQSIAEMVNVDARSV-HAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDK-LV 215

Query: 226 AISRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKD 280
            +         EII ++GA+    A + A   I   I   EN V  + +  DG Y +  D
Sbjct: 216 KMFEDVRDAAYEIIKLKGATFYGIATALA--RISKAILNDENAVLPLSVYMDGQYGL-ND 272

Query: 281 IIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           I  G P  I +N    I+  + +     + +  S  +LK  +
Sbjct: 273 IYIGTPAVINRNGIQNIL-EIPLTDHEEESMQKSASQLKKVL 313

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Length = 326

 Score = 74.5 bits (184), Expect = 2e-15
 Identities = 75/342 (21%), Positives = 127/342 (37%), Gaps = 53/342 (15%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           M K   ++++ GA G +G +  F + N  +   D+ +++ + +       KA  G +M++
Sbjct: 1   MNKHVNKVALIGA-GFVGSSYAFALINQGIT--DELVVIDVNKE------KA-MGDVMDL 50

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGK 117
                     V          KDA+I  +     +K    R EL+  N  IF   + +  
Sbjct: 51  NHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVM 110

Query: 118 ALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI---------- 167
           A    +  D   LV  NPV+  TY T K     S         L   R I          
Sbjct: 111 A----SGFDGIFLVATNPVDILTYATWK----FS--------GLPKERVIGSGTTLDSAR 154

Query: 168 --AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLP 225
               L+        ++    + G H  +  P + +A V GV + +++  N  + +   L 
Sbjct: 155 FRFMLSEYFGAAPQNV-CAHIIGEHGDTELPVWSHANVGGVPVSELVEKNDAYKQEE-LD 212

Query: 226 AISRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKD 280
            I          II  +GA+    A S A   I   I   EN + T+    DG Y    D
Sbjct: 213 QIVDDVKNAAYHIIEKKGATYYGVAMSLA--RITKAILHNENSILTVSTYLDGQYGA-DD 269

Query: 281 IIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           +  G P  + +     I   L +++  +++   S   LKN +
Sbjct: 270 VYIGVPAVVNRGGIAGIT-ELNLNEKEKEQFLHSAGVLKNIL 310

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Length = 310

 Score = 74.5 bits (184), Expect = 3e-15
 Identities = 58/340 (17%), Positives = 107/340 (31%), Gaps = 53/340 (15%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++ I G+ G +G    + +A   +  +     + L++   K +    +    +I     
Sbjct: 1   MKVGIVGS-GMVGSATAYALALLGVARE-----VVLVDLDRKLA----QAHAEDILHAT- 49

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNSV 122
           P    V V        + A   +L     ++    R +LL  N+ +F   + +       
Sbjct: 50  PFAHPVWVWAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLE---- 105

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKL 170
           A+ +  +LV  NPV+  T +               +  L   R +            A L
Sbjct: 106 AAPEAVLLVATNPVDVMTQVAYA------------LSGLPPGRVVGSGTILDTARFRALL 153

Query: 171 ASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR 230
           A  L     S+   +V G H  S    +  A V GV + +                I   
Sbjct: 154 AEYLRVAPQSV-HAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEG 212

Query: 231 ----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGF 285
                  II  +GA+     A  A   +   I   E  V T+   +     V  ++    
Sbjct: 213 VRRAAYRIIEGKGATYYGIGAGLA--RLVRAILTDEKGVYTVSAFTPEVAGV-LEVSLSL 269

Query: 286 PVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
           P  +        +    +    R  +  S E LK    ++
Sbjct: 270 PRILGAGGVAGTV-YPSLSPEERAALRRSAEILKEAAFAL 308

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Length = 316

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 69/342 (20%), Positives = 126/342 (36%), Gaps = 53/342 (15%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
                 R+ + GA G +G + +F + N  +   D+ +++   E+      KA  G  M+ 
Sbjct: 2   KNNGGARVVVIGA-GFVGASYVFALMNQGIA--DEIVLIDANES------KA-IGDAMDF 51

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGK 117
                     V +        +DA++ ++     +K    R +L+  N +IF   +E   
Sbjct: 52  NHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVM 111

Query: 118 ALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI---------- 167
           A    +      LV  NPV+  TY T K               L H R I          
Sbjct: 112 A----SGFQGLFLVATNPVDILTYATWK------------FSGLPHERVIGSGTILDTAR 155

Query: 168 --AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLP 225
               L    +    ++   ++ G H  +  P +  A +  + IR ++ +         L 
Sbjct: 156 FRFLLGEYFSVAPQNV-HAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKG-EEAQKDLE 213

Query: 226 AISRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKD 280
            I         +II  +GA+    A   A   +   I   EN + T+    DG Y   +D
Sbjct: 214 RIFVNVRDAAYQIIEKKGATYYGIAMGLA--RVTRAILHNENAILTVSAYLDGLYGE-RD 270

Query: 281 IIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           +  G P  I +N   ++I  +E++   + + + S   LK+ +
Sbjct: 271 VYIGVPAVINRNGIREVI-EIELNDDEKNRFHHSAATLKSVL 311

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Length = 317

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 67/346 (19%), Positives = 129/346 (37%), Gaps = 54/346 (15%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
            K  ++ + G  G +G +  F + N  ++  D+ +I+ L         K  +G +M+++ 
Sbjct: 4   FKGNKVVLIGN-GAVGSSYAFSLVNQSIV--DELVIIDLDTE------KV-RGDVMDLKH 53

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKAL 119
                   V V     +   DA++ ++     +K    R +L++ N  IF   + +  A 
Sbjct: 54  ATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMA- 112

Query: 120 NSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------ 167
              +  D   LV  NPV+   Y T K               L   R I            
Sbjct: 113 ---SKFDGIFLVATNPVDILAYATWK------------FSGLPKERVIGSGTILDSARFR 157

Query: 168 AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI 227
             L+   +    S+    + G H  +  P + +A + G  ++ ++           +  I
Sbjct: 158 LLLSEAFDVAPRSV-DAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQ--IEQI 214

Query: 228 SRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDII 282
             +      +II  +GA+    A   A   I + IF  E+ V T+    +G Y   +D+ 
Sbjct: 215 FVQTRDAAYDIIQAKGATYYGVAMGLA--RITEAIFRNEDAVLTVSALLEGEYEE-EDVY 271

Query: 283 FGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
            G P  I +N    ++  + ++   + K   S + LK+ +     L
Sbjct: 272 IGVPAVINRNGIRNVV-EIPLNDEEQSKFAHSAKTLKDIMAEAEEL 316

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A* Length = 294

 Score = 69.8 bits (172), Expect = 8e-14
 Identities = 52/330 (15%), Positives = 121/330 (36%), Gaps = 55/330 (16%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++   GA G++G    F       + +     + L++ +   +     G  M++     
Sbjct: 1   MKLGFVGA-GRVGSTSAFTCLLNLDVDE-----IALVDIAEDLAV----GEAMDLAHAAA 50

Query: 66  PLLVDVSV-HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNS 121
            +     +      +  K + I ++     RK  M R +L   N+ I     ++      
Sbjct: 51  GIDKYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVE--- 107

Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI--------AKLASK 173
             + + K+LVV NP++  TYI  K +                N            +L  +
Sbjct: 108 -NAPESKILVVTNPMDVMTYIMWKES------------GKPRNEVFGMGNQLDSQRLKER 154

Query: 174 L-NEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGE 232
           L N    +I++ ++ G H  SM+     A  +G +  + + N+           +     
Sbjct: 155 LYNAGARNIRRAWIIGEHGDSMFVAKSLADFDGEVDWEAVEND-----------VRFVAA 203

Query: 233 EIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPVKIKN 291
           E+I  +GA+    A +     +   +      +    +   G Y + +++  G P K+  
Sbjct: 204 EVIKRKGATIFGPAVAIY--RMVKAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGK 260

Query: 292 SKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           +  ++  ++++     +K+  S + L+  +
Sbjct: 261 NGAEVA-DIKLSDEEIEKLRNSAKILRERL 289

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 69/340 (20%), Positives = 124/340 (36%), Gaps = 55/340 (16%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
               ++ + G  G +G +  F +A   +   ++ +I+ +++       +  KG  +++ED
Sbjct: 3   PNHQKVVLVGD-GAVGSSYAFAMAQQGIA--EEFVIVDVVKD------RT-KGDALDLED 52

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKAL 119
                     ++    +  KDA++ ++    P+K    R +L+  N +I    ++     
Sbjct: 53  AQ-AFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD- 110

Query: 120 NSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------ 167
              +  D   LV  NPV+  TY T K     S             R I            
Sbjct: 111 ---SGFDGIFLVAANPVDILTYATWK----FS--------GFPKERVIGSGTSLDSSRLR 155

Query: 168 AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAI 227
             L  + N    S+   ++ G H  S +  Y  AT+    +RD+         +  L  +
Sbjct: 156 VALGKQFNVDPRSV-DAYIMGEHGDSEFAAYSTATIGTRPVRDVAKEQ--GVSDDDLAKL 212

Query: 228 SRR----GEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDII 282
                    +II+++GA+      +     I   I   EN V  +G   DG Y +  DI 
Sbjct: 213 EDGVRNKAYDIINLKGATFYGIGTALM--RISKAILRDENAVLPVGAYMDGQYGL-NDIY 269

Query: 283 FGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            G P  I      +II    +     KK+  S   LK  +
Sbjct: 270 IGTPAIIGGTGLKQII-ESPLSADELKKMQDSAATLKKVL 308

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Length = 304

 Score = 68.3 bits (168), Expect = 2e-13
 Identities = 49/259 (18%), Positives = 85/259 (32%), Gaps = 39/259 (15%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
           +++ + G  G +G    F +       +     L L++    ++    +    +I     
Sbjct: 1   MKVGVVGT-GFVGSTAAFALVLRGSCSE-----LVLVDRDEDRA----QAEAEDIAHAA- 49

Query: 66  PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNSV 122
           P+     V     +   DA + IL     +K    R +LL  N+ IF   + Q       
Sbjct: 50  PVSHGTRVWHGGHSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITR---- 105

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLR-------LDHNRAIAKLASKLN 175
           A+ D  +LV  NPV+  T +  + AP                   LD  R    +A    
Sbjct: 106 AAPDAVLLVTSNPVDLLTDLATQLAP----GQ-----PVIGSGTVLDSARFRHLMAQHAG 156

Query: 176 EPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR----G 231
              +     +V G H  S    +  A V G+ + D +   +          I        
Sbjct: 157 VDGTHA-HGYVLGEHGDSEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAA 215

Query: 232 EEIISIRGASSAASAASAA 250
             II  + A+     A+ A
Sbjct: 216 ASIIEGKRATYYGIGAALA 234

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Length = 319

 Score = 67.2 bits (165), Expect = 7e-13
 Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 43/265 (16%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIF---IEQGKALNSVASRDVKVLVVGNPVNT 138
           +DA++ ++     +K    R EL+    +I    +          + +   +++ NPV+ 
Sbjct: 74  RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVK----VAPNAIYMLITNPVDI 129

Query: 139 NTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKLASKLNEPVSSIKKVFV 186
            T++  K    L+         L  N+                +A +    V ++   ++
Sbjct: 130 ATHVAQK----LT--------GLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNV-HAYI 176

Query: 187 WGNHSLSMYPDYRYATVNGVLIRDMI-NNNSFWNKNVFLPAISRR----GEEIISIRGAS 241
            G H  S  P +  AT+ GV + D                 I +       +II+ +GA+
Sbjct: 177 AGEHGDSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGAT 236

Query: 242 SAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQN 299
           + A   S     I + +    N +  +       + +  DI    P  + +      I N
Sbjct: 237 NYAIGMSGV--DIIEAVLHDTNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTI-N 292

Query: 300 LEIDKFSRKKINLSIEELKNEILSI 324
             +       +  S E LK      
Sbjct: 293 TPVSDKELAALKRSAETLKETAAQF 317

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Length = 330

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 45/352 (12%), Positives = 102/352 (28%), Gaps = 72/352 (20%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           +   +I++ G    +G      +   DL   D+  ++ ++E       K  KG +M++E 
Sbjct: 19  RSYNKITVVGC-DAVGMADAISVLMKDLA--DEVALVDVMED------KL-KGEMMDLEH 68

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122
               L     V     +    + + ++     ++    R  L+  N +IF      +   
Sbjct: 69  GSLFLHTAKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH 128

Query: 123 ASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI------------AKL 170
            S D    +             K +             L  +R I              +
Sbjct: 129 -SPDCLKELHPELGTDKNKQDWKLS------------GLPMHRIIGSGCNLDSARFRYLM 175

Query: 171 ASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRR 230
             +L      +   +V G H  S+   +       +             K+V   A    
Sbjct: 176 GERLGVHSCLV-IGWVIGQHGDSVPSVWSGMWDAKLH------------KDVVDSA---- 218

Query: 231 GEEIISIRGA---------------SSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGS 274
             E+I ++G                 +  +    ++  +   I      V  +       
Sbjct: 219 -YEVIKLKGYTSWAIGLVVSNPVDVLTYVAWKGCSVADLAQTIMKDLCRVHPVSTMVKDF 277

Query: 275 YNVPKDIIFGFPVKIKN--SKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
           Y +  ++    P  + N  S   I+  +++     +++  S   L +    +
Sbjct: 278 YGIKDNVFLSLPCVLNNGISHCNIV-KMKLKPDEEQQLQKSATTLWDIQKDL 328

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 3e-10
 Identities = 32/236 (13%), Positives = 80/236 (33%), Gaps = 70/236 (29%)

Query: 122 VASRDVK-VLVVGNPVNTNTYI--TMKSAPDLSYKNFT-AMLRLDHNRAIAKLASKLNEP 177
           ++  ++  +++  + V+    +  T+ S  +   + F   +LR+++   ++ + ++  +P
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 178 VSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKN-VFLPAISRRGEEIIS 236
            S + +          MY + R               +  +N N VF      R +  + 
Sbjct: 106 -SMMTR----------MYIEQR---------------DRLYNDNQVFAKYNVSRLQPYLK 139

Query: 237 IR--------------------GASS-AASAASAA--IDHIKDWIFGTENWVTMGIPSDG 273
           +R                    G +  A     +      +   IF    W+ +      
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF----WLNLK----- 190

Query: 274 SYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLIR 329
           + N P+ ++      ++   Y+I  N          I L I  ++ E   +  L++
Sbjct: 191 NCNSPETVL----EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE---LRRLLK 239

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Length = 303

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 32/239 (13%)

Query: 82  KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY 141
             + + I        S+    +++  N  +F     AL    S+   +LV   PV   TY
Sbjct: 76  AHSKVVI-FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY-SQHSVLLVASQPVEIMTY 133

Query: 142 ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYA 201
           +T K +   + +       LD  R    + + L    S   +V+V G         +   
Sbjct: 134 VTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGK-EVWVIGEQGEDKVLTWSGQ 192

Query: 202 TVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT 261
                              +     +S R  E++ ++G  S +   S A   + D I   
Sbjct: 193 EEVV--------------SHTSQVQLSNRAMELLRVKGQRSWSVGLSVA--DMVDSIVNN 236

Query: 262 ENWV-TMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK 318
           +  V ++   + G Y++  ++    P  +  N   ++I           K  L  + + 
Sbjct: 237 KKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVI-----------KTTLKEDTVT 284

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Length = 309

 Score = 52.1 bits (126), Expect = 6e-08
 Identities = 41/295 (13%), Positives = 92/295 (31%), Gaps = 45/295 (15%)

Query: 54  KGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAIL----IGSFPRKSNMERSELLAINS 109
           K   ++ +D +  L    ++  N   A  DA++ I     I         +R   L   S
Sbjct: 40  KADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTS 99

Query: 110 SIF---IEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRA 166
           S+        K     +     ++V+ NPV+  T +               +     ++ 
Sbjct: 100 SMVQSVGTNLKE----SGFHGVLVVISNPVDVITALFQH------------VTGFPAHKV 143

Query: 167 I------------AKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINN 214
           I              +    +    S+   +  G H  S +  +    V G  I  + + 
Sbjct: 144 IGTGTLLDTARMQRAVGEAFDLDPRSVS-GYNLGEHGNSQFVAWSTVRVMGQPIVTLADA 202

Query: 215 NSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGS 274
                  +   A  + G  +++ +G +S   A SA    I   +    +     +     
Sbjct: 203 GDIDLAAIEEEAR-KGGFTVLNGKGYTSYGVATSAI--RIAKAVMADAHAE---LVVSNR 256

Query: 275 YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
            +    +   +P  I ++        L++    ++K+  S + ++     I   +
Sbjct: 257 RDD-MGMYLSYPAIIGRDGVLAETT-LDLTTDEQEKLLQSRDYIQQRFDEIVDTL 309

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	329
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	100.0
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	100.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	100.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	100.0
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	100.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	100.0
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	100.0
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	100.0
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	100.0
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	100.0
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	100.0
3tl2_A	315	Malate dehydrogenase; center for structural genomi	100.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	100.0
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	100.0
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	100.0
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	100.0
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	100.0
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	100.0
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	100.0
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	100.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	100.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	100.0
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	100.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	100.0
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	100.0
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	100.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	100.0
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	100.0
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	100.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	100.0
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	100.0
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	100.0
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	100.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	100.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	100.0
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	100.0
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	100.0
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	100.0
1up7_A	417	6-phospho-beta-glucosidase; hydrolase, family4 hyd	100.0
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	100.0
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	100.0
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	100.0
3u95_A	477	Glycoside hydrolase, family 4; hydrolysis, cytosol	99.98
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	99.02
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.85
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	98.82
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.72
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.7
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.7
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.67
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	98.64
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	98.63
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.61
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.61
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.6
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	98.59
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	98.59
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	98.55
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	98.54
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	98.52
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	98.5
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	98.47
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	98.45
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.45
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.44
3qha_A	296	Putative oxidoreductase; seattle structural genomi	98.43
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	98.43
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	98.42
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.4
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	98.39
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	98.39
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	98.37
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	98.37
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.36
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	98.35
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	98.35
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.34
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.34
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.33
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	98.3
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.3
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.29
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	98.29
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	98.29
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	98.28
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	98.28
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	98.28
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	98.28
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.27
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	98.27
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	98.25
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.25
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	98.25
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	98.23
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	98.23
4ezb_A	317	Uncharacterized conserved protein; structural geno	98.23
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	98.23
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	98.22
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.21
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.21
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.2
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.2
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	98.2
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	98.2
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	98.2
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	98.19
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.18
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.18
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	98.18
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	98.17
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.17
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	98.17
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.17
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	98.16
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	98.16
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.15
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.14
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	98.14
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.13
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	98.13
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.13
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	98.13
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.12
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	98.12
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.12
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	98.11
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.1
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	98.08
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	98.07
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.05
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.05
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	98.04
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.04
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.04
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	98.03
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	98.03
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	98.02
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	98.02
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	98.01
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.01
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	98.0
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	98.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.99
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.99
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.99
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	97.99
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.99
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.98
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.96
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	97.96
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.96
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.96
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.95
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	97.94
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	97.94
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	97.94
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	97.94
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.93
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	97.93
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.93
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	97.93
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.92
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.92
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.9
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.9
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.89
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.88
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	97.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.88
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.87
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.86
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.86
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	97.86
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.86
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.86
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.85
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.84
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.84
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.84
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.84
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.83
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.83
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.83
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.82
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.82
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	97.82
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.81
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.81
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	97.81
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.81
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	97.8
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.8
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.8
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.8
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.79
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.79
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.79
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.79
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.78
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.78
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.78
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.78
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.77
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.77
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.76
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.76
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.76
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.76
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.75
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.75
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.75
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.75
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.74
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	97.74
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.74
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.74
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.74
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.74
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.73
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.73
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.73
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.73
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.73
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.73
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.72
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.72
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	97.72
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.72
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.72
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.72
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.72
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.7
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.7
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.7
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.7
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.69
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.69
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.69
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.69
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.68
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.68
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.68
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	97.68
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.68
4f6c_A	427	AUSA reductase domain protein; thioester reductase	97.68
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.68
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.68
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	97.68
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.68
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.68
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.67
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.67
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.67
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.67
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.67
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.67
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.67
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.66
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.66
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.66
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.65
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.65
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.65
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.65
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.65
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.65
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.65
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.65
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.65
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.64
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.64
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.64
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.64
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.63
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.63
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.62
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.62
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.62
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.62
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.61
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.61
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	97.61
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.61
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.6
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.6
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.6
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.59
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.58
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.58
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.58
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.58
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.58
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.58
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.58
1spx_A	278	Short-chain reductase family member (5L265); paral	97.57
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.57
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.57
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.57
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.56
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.56
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.56
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.56
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.56
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.55
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.55
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.55
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.55
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.54
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.54
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.53
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.53
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.52
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.52
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.52
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.52
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.52
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.51
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.51
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.51
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.51
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.5
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.5
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.5
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.5
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.5
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.49
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.49
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.49
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.49
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.49
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.48
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.48
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.48
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.48
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.48
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.47
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.47
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.46
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.46
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.46
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.46
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.46
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.46
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.45
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.45
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.45
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.44
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.44
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.43
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.43
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.43
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.43
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	97.42
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.42
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.42
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.42
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.42
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.42
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.41
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.4
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.4
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.4
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.4
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.39
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	97.39
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.39
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.39
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.39
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.38
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.37
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.37
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.37
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	97.37
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.37
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.37
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.36
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.35
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.35
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.34
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.34
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.34
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.33
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.33
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.32
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	97.32
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.31
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.31
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.31
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.31
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.3
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.3
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.29
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.29
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.28
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.27
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.27
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.27
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.27
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.27
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.26
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.26
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.25
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	96.34
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.24
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.24
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.23
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.22
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.21
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.21
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.2
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.2
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.2
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.2
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.2
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.19
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.19
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.17
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	97.16
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	97.16
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	97.14
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	97.13
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.13
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	97.12
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.11
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.1
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.09
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.08
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.08
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.05
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.03
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	97.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.98
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.97
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.97
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.96
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	96.96
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.96
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	96.92
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.88
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.87
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.85
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.82
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.81
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.8
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.78
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.77
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.75
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	96.73
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.73
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.66
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.64
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.64
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.63
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.62
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	96.6
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.6
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	96.6
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.57
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.57
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.57
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.57
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	96.57
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.55
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	96.55
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.54
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.54
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.54
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.53
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	96.52
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.52
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.5
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.5
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.48
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.47
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.44
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.44
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	96.43
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	96.42
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.42
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.42
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.37
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.36
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.35
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	96.35
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.34

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=100.00  E-value=6.7e-73  Score=530.34  Aligned_cols=324  Identities=41%  Similarity=0.701  Sum_probs=292.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+||||+|+||+++++.|+.+++++.++|  |.|+|.+.+..+++++|.++||+|+..+++.+++++++.++++
T Consensus        29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~--l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~  106 (375)
T 7mdh_A           29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQP--IALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF  106 (375)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCC--EEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCce--eEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence            56779999999779999999999999999986554  5554444224467789999999999867777888888899999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      +|||+||+++|.||+|||+|.|++..|+++++++++.|.++++|+++++++|||+|++|++++++++.+|+++|+++|.|
T Consensus       107 ~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~k~sg~~~~rvig~gT~L  186 (375)
T 7mdh_A          107 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRL  186 (375)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHHHHcCCCCccEEEeeehH
Confidence            99999999999999999999999999999999999999998459999999999999999999999866666669999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS  241 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~  241 (329)
                      |++||++++|+++|++|++|++++||||||+++||+||+++|+|+|+.++++++ .|..+++.+++++++++|++.||++
T Consensus       187 DsaR~r~~lA~~lgv~~~~V~~v~V~GeHgdt~vp~~S~a~V~G~pl~~~~~~~-~~~~~~i~~~v~~~g~eII~~kG~t  265 (375)
T 7mdh_A          187 DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRT-KWLEEEFTITVQKRGGALIQKWGRS  265 (375)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEECCEEEBCSSTTCEEECSSCEETTEEGGGTCCCH-HHHHHHHHHHHHTHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHHhCcChhhcccceEEecCCCceeeeeecccCCCEEhhHhccch-hhHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999866899999999999999999999999988665 6778899999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhC-CC-cEEEEEeecCC-CCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFG-TE-NWVTMGIPSDG-SYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL  317 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~-~~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  317 (329)
                      +++++++++++.+.+|+.+ |+ +|+|||++++| +||+|+|+|||+||++ ++|++++++.++|+++|+++|++|+++|
T Consensus       266 s~a~aa~~i~~~i~~~l~g~d~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~l~~Sa~~L  345 (375)
T 7mdh_A          266 SAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAEL  345 (375)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCTTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHHHHHHHHHH
Confidence            9876666666666666764 77 99999999999 7999999999999999 9999999955999999999999999999


Q ss_pred             HHHHHHHHhhh
Q psy9582         318 KNEILSISHLI  328 (329)
Q Consensus       318 ~~~~~~~~~~~  328 (329)
                      +++.+.+.++|
T Consensus       346 ~~e~~~~~~~~  356 (375)
T 7mdh_A          346 LAEKKCVAHLT  356 (375)
T ss_dssp             HHHHHHTHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999887

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=100.00  E-value=1.6e-69  Score=504.46  Aligned_cols=321  Identities=46%  Similarity=0.793  Sum_probs=286.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +++||+|+||+|+||+++++.|+.+++++.++|++|+|+|++  +.+++++|.++||+|+..++..++.++++.+++++|
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~--~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT--PMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKD   79 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCC--CccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCC
Confidence            568999999889999999999999999987778889999998  224578999999999866666778888888999999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCe-EEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDV-KVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a-~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld  162 (329)
                      ||+||+++|.||+||++|.+++..|+++++++++.+++++ |++ +++++|||+|++|++++++++++|+++|+++|.||
T Consensus        80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvsNPvd~~t~~~~~~~~~~p~~~ig~~t~LD  158 (333)
T 5mdh_A           80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA-KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLD  158 (333)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCchHHHHHHHHHHcCCCCcCEEEEEEhHH
Confidence            9999999999999999999999999999999999999998 876 79999999999999999998667777788999999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCee--ccee--hhhhhccCccchhhhHHHHHhhhhHHHHHhc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATV--NGVL--IRDMINNNSFWNKNVFLPAISRRGEEIISIR  238 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v--~~~p--~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~k  238 (329)
                      ++|+++++|+++|++|++|++++||||||+++||+||++++  +|.|  +.+++.++ .|..+++.+++++++++|++.|
T Consensus       159 s~R~~~~la~~l~v~~~~v~~~vV~GeHgds~vp~~S~a~v~i~g~~~~~~~~~~~~-~~~~~~~~~~v~~~g~eIi~~k  237 (333)
T 5mdh_A          159 HNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDD-SWLKGEFITTVQQRGAAVIKAR  237 (333)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECTTCEEECSSCEEEHHHHHCCH-HHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCHHHeeecEEEEcCCCCEEEeeeccEeccCCeeccHHHhhccc-cccHHHHHHHHHHHHHHHHHcc
Confidence            99999999999999999999987799999999999999986  5775  45777654 6778899999999999999988


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCC-C-cEEEEEeecCC-CCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGT-E-NWVTMGIPSDG-SYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~-~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      |.+++++++.++++.+..++.++ + +|+|||++++| +||+|+|+|||+||++++|+++++++++|+++|+++|++|++
T Consensus       238 ~~ssa~~~a~~~~~~~~~il~~~~~~~v~~~s~~~~G~~YGi~~~v~~s~P~~~~~Gv~~iv~~l~L~~~E~~~l~~sa~  317 (333)
T 5mdh_A          238 KLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAK  317 (333)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEecCCcccCCCCCeEEEEEEEEcCCeEEEcCCCCCCHHHHHHHHHHHH
Confidence            87666566655554444555555 4 79999999999 999988999999999999999998768999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy9582         316 ELKNEILSISHLI  328 (329)
Q Consensus       316 ~i~~~~~~~~~~~  328 (329)
                      +|++.++.+.++|
T Consensus       318 ~L~~~~~~~~~~l  330 (333)
T 5mdh_A          318 ELAEEKETAFEFL  330 (333)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999887

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=100.00  E-value=4.2e-69  Score=501.89  Aligned_cols=315  Identities=44%  Similarity=0.741  Sum_probs=274.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +.||+|+||+|+||+++++.|+++.+++++++.||+|+|++  +...+++|.++||+|+.++....+.++++.+++++||
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~--~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~a  101 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE--PALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGV  101 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC--CccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCC
Confidence            46999999999999999999999999998888899999998  3345678999999999877777888889999999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCC-CcEEEechhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSY-KNFTAMLRLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~-~~i~~~t~lds  163 (329)
                      |+||+++|.||||||+|.|++..|+++++++++.|.++|+|+++|+++|||+|+++++++++.+++++ ++|+++|.||+
T Consensus       102 dvVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~g~~~~r~i~~~t~LDs  181 (345)
T 4h7p_A          102 AIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQGKLNPRHVTAMTRLDH  181 (345)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTTTCSCGGGEEECCHHHH
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHccCCCCcceeeeccchhH
Confidence            99999999999999999999999999999999999999878999999999999999999997657655 45899999999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccH
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSA  243 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~  243 (329)
                      +|+++++|+++|++|++|++++|||+||+++||+||+++++|.|+.+++.++  |..+++.+++++++++|++.||.+++
T Consensus       182 ~R~~~~la~~~~v~~~~V~~~~V~G~HG~t~vp~~s~a~v~g~~~~~~~~~~--~~~~~~~~~v~~~g~eIi~~kg~ss~  259 (345)
T 4h7p_A          182 NRALSLLARKAGVPVSQVRNVIIWGNHSSTQVPDTDSAVIGTTPAREAIKDD--ALDDDFVQVVRGRGAEIIQLRGLSSA  259 (345)
T ss_dssp             HHHHHHHHHHHTSCGGGEECCEEEBCSSTTCEEECTTCEETTEEGGGGCCC--------HHHHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHHCcChhheecceeecCCCCeEEeeeccceECCccHHHhcchh--hHHHHHHHHHHhhhhhhhhcCCCcch
Confidence            9999999999999999999888999999999999999999999999988654  66678999999999999999998777


Q ss_pred             HHHHHHHHHHHHHHHhCC-C-cEEEEEeec-CCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         244 ASAASAAIDHIKDWIFGT-E-NWVTMGIPS-DGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       244 ~~~a~~~~~~l~~~i~~~-~-~i~~~~v~~-~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      +++|+++++.+..|+.+. + .++++++++ +|+||+|+|+|||+||++++|.+++++.++|+++|+++|++|+++|+++
T Consensus       260 ~s~a~a~~~~~~~~l~~~~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~~G~~~iv~~l~l~~~e~~~l~~s~~~L~~E  339 (345)
T 4h7p_A          260 MSAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCHAGEWTVVSGKLNGDLGKQRLASTIAELQEE  339 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCTTCCCSSCEEEEEEEEETTEEEECCSCC-----CGGGHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCceEEEEEEEeCCCCcCCCCCEEEEEEEEEeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            777776776666666665 3 677777877 4899999999999999997789999988999999999999999999998


Q ss_pred             HHH
Q psy9582         321 ILS  323 (329)
Q Consensus       321 ~~~  323 (329)
                      ...
T Consensus       340 ~~~  342 (345)
T 4h7p_A          340 RAQ  342 (345)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=100.00  E-value=1e-68  Score=497.33  Aligned_cols=306  Identities=22%  Similarity=0.291  Sum_probs=281.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~   79 (329)
                      ||++.+||+|||| |.+|+++++.|+..++++     +|+|+|++    ++++++.++||+|. .++. .+++++++.++
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~-----~l~l~D~~----~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~   69 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITD-----ELVVIDVN----KEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE   69 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSC----HHHHHHHHHHHHHT-GGGSSSCCEEEEECGG
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCc-----eEEEEecc----hHHHHHHHHHHHhc-cccccCCeEEEeCcHH
Confidence            6777899999998 999999999999999877     99999999    88899999999997 3554 45666666789


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-e
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-M  158 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~  158 (329)
                      +++|||+||+++|.|++||++|.+++.+|+++++++++.+.++| |++|++++|||+|++|+++++++ ++|++|++| +
T Consensus        70 a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvvtNPvd~~t~~~~k~~-g~p~~rviG~g  147 (326)
T 3pqe_A           70 DCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG-FDGIFLVATNPVDILTYATWKFS-GLPKERVIGSG  147 (326)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEECT
T ss_pred             HhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcCChHHHHHHHHHHhc-CCCHHHEEeec
Confidence            99999999999999999999999999999999999999999998 99999999999999999999998 899999777 5


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC---ccchhhhHHHHHhhhhHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---SFWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~---~~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.||++|+++++|+++|++|++|+++ ||||||+++||+||+++++|+|+.+++++.   +.|..+++.+++++++++|+
T Consensus       148 t~LD~~R~~~~la~~lgv~~~~V~~~-V~GeHG~t~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi  226 (326)
T 3pqe_A          148 TTLDSARFRFMLSEYFGAAPQNVCAH-IIGEHGDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHII  226 (326)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECGGGCEETTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhCCCHHHceee-eeecCCCceeeeeeeeeECCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheee
Confidence            99999999999999999999999987 899999999999999999999999988552   15678999999999999999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      +.||+++|+++.  ++.+++++|++|+ +|+|||++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus       227 ~~kG~t~~a~a~--a~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~s  302 (326)
T 3pqe_A          227 EKKGATYYGVAM--SLARITKAILHNENSILTVSTYLDGQYGAD-DVYIGVPAVVNRGGIAGITE-LNLNEKEKEQFLHS  302 (326)
T ss_dssp             HHHSCCCHHHHH--HHHHHHHHHHTTCCEEECCEEEEESGGGCE-EEEEECCEEEETTEEEEECC-CCCCHHHHHHHHHH
T ss_pred             eCCCCcHHHHHH--HHHHHHHHHhcCCCcEEEEEEeeccccCCC-ceEEEEEEEEcCCceEEEec-CCCCHHHHHHHHHH
Confidence            999999988765  3458999999998 9999999999999995 9999999999 999999999 99999999999999


Q ss_pred             HHHHHHHHHHH
Q psy9582         314 IEELKNEILSI  324 (329)
Q Consensus       314 ~~~i~~~~~~~  324 (329)
                      +++|++.++.+
T Consensus       303 ~~~l~~~~~~~  313 (326)
T 3pqe_A          303 AGVLKNILKPH  313 (326)
T ss_dssp             HHHHHHHHTTT
T ss_pred             HHHHHHHHHHh
Confidence            99999988754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=4.9e-69  Score=498.66  Aligned_cols=305  Identities=20%  Similarity=0.331  Sum_probs=262.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +++||+|||| |.+|+++++.|+..++++     +|+|+|++    +++++|.++|++|.. ++..+++++++.+++++|
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~-----el~l~D~~----~~k~~g~a~DL~~~~-~~~~~~~i~~~~~~a~~~   76 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQ-----EIGIVDIF----KDKTKGDAIDLEDAL-PFTSPKKIYSAEYSDAKD   76 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSC----HHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCC-----eEEEEeCC----hHHHHHHHhhHhhhh-hhcCCcEEEECcHHHhcC
Confidence            4589999998 999999999999999987     99999999    888999999999976 444567777788999999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~ld  162 (329)
                      ||+||+++|.|++||++|.+++.+|+++++++++.|+++| |++|++++|||+|++|+++++++ ++|++|++| +|.||
T Consensus        77 aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPvdi~t~~~~k~~-g~p~~rviG~gt~LD  154 (326)
T 3vku_A           77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVDILTYATWKLS-GFPKNRVVGSGTSLD  154 (326)
T ss_dssp             CSEEEECCCCC----------------CHHHHHHHHHTTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTTHHH
T ss_pred             CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCchHHHHHHHHHhc-CCCHHHeeeecccCc
Confidence            9999999999999999999999999999999999999998 99999999999999999999998 999999777 59999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC---ccchhhhHHHHHhhhhHHHHHhcC
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---SFWNKNVFLPAISRRGEEIISIRG  239 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~---~~~~~~~l~~~v~~~~~~i~~~kg  239 (329)
                      ++|+++++|+++|++|++|+++ ||||||+++||+||+++++|+|+.+++++.   +.|..+++.+++++++++|++.||
T Consensus       155 ~~R~~~~la~~lgv~~~~V~~~-ViGeHGdt~vp~~S~a~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kG  233 (326)
T 3vku_A          155 TARFRQSIAKMVNVDARSVHAY-IMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLKG  233 (326)
T ss_dssp             HHHHHHHHHHHHTSCGGGEECC-EEBSSSTTCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCCHHHCeEE-EEcCCCCeeEEeeeccccCCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999987 899999999999999999999999988542   156788999999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582         240 ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL  317 (329)
Q Consensus       240 ~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  317 (329)
                      +++|+++++  +.+++++|++|+ +|+|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|
T Consensus       234 ~t~~a~a~a--~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~sa~~L  309 (326)
T 3vku_A          234 ATFYGIATA--LARISKAILNDENAVLPLSVYMDGQYGL-NDIYIGTPAVINRNGIQNILE-IPLTDHEEESMQKSASQL  309 (326)
T ss_dssp             CCCHHHHHH--HHHHHHHHHTTCCEEEEEEEEEEEGGGE-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHH
T ss_pred             CchHHHHHH--HHHHHHHHhcCCCceEEEEeeccCccCC-CceEEEEEEEEcCCceEEEec-CCCCHHHHHHHHHHHHHH
Confidence            999988653  458999999998 999999999999999 59999999999 999999999 999999999999999999


Q ss_pred             HHHHHHHHh
Q psy9582         318 KNEILSISH  326 (329)
Q Consensus       318 ~~~~~~~~~  326 (329)
                      ++.++.+..
T Consensus       310 ~~~~~~~~~  318 (326)
T 3vku_A          310 KKVLTDAFA  318 (326)
T ss_dssp             HCC------
T ss_pred             HHHHHHHHH
Confidence            998887643

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=100.00  E-value=9.5e-68  Score=488.42  Aligned_cols=303  Identities=21%  Similarity=0.390  Sum_probs=268.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-ENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~~~al~~a   84 (329)
                      |||+|||| |.||+++++.|+..++++     +|+|+|++    ++++++.++|++|.......+..++ ++.+++++||
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~-----el~l~D~~----~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~a   70 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAK-----EVVMVDIK----DGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDS   70 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSS-----EEEEECSS----TTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCc----hHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCC
Confidence            68999998 999999999999999876     99999999    7789999999999753222233343 3669999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEec-hhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML-RLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t-~lds  163 (329)
                      |+||+++|.|++||++|.+++.+|+++++++++.+.++| |+++++++|||+|++|+++++.+ ++|++|++|+| .||+
T Consensus        71 DvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~~-g~p~~rviG~~t~LD~  148 (314)
T 3nep_X           71 DVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVANPLDVMTYVAYEAS-GFPTNRVMGMAGVLDT  148 (314)
T ss_dssp             SEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECCSSHHHHHHHHHHHH-TCCGGGEEECCHHHHH
T ss_pred             CEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecCCchhHHHHHHHHhc-CCChHHEEeecCchHH
Confidence            999999999999999999999999999999999999997 99999999999999999999988 89999988875 9999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCC-cc
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA-SS  242 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~-~~  242 (329)
                      +|+++++|+++|++|++|+++ ||||||+++||+||+++++|+|+.+++.++   ..+++.+++++++++|++.||. +.
T Consensus       149 ~R~~~~la~~lgv~~~~v~~~-ViG~Hg~t~vp~~S~~~v~g~p~~~~~~~~---~~~~i~~~v~~~g~eIi~~kg~sa~  224 (314)
T 3nep_X          149 GRFRSFIAEELDVSVRDVQAL-LMGGHGDTMVPLPRYTTVGGIPVPQLIDDA---RIEEIVERTKGAGGEIVDLMGTSAW  224 (314)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEE-EEESSGGGEEEEEEEEEETTEEGGGTSCHH---HHHHHHHHHHTHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHhCcCHHHeEEE-EECCCCCcEEeeeecCeECcEehhhccCHH---HHHHHHHHHHHhHHHHHhccCCcHH
Confidence            999999999999999999988 799999999999999999999999987554   3588999999999999999984 44


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      |++++  ++.++++||++|+ +|+|||++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++.
T Consensus       225 ~a~a~--a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~lg~~Gv~~v~~-l~L~~~E~~~l~~s~~~l~~~  300 (314)
T 3nep_X          225 YAPGA--AAAEMTEAILKDNKRILPCAAYCDGEYGL-DDLFIGVPVKLGAGGVEEVIE-VDLDADEKAQLKTSAGHVHSN  300 (314)
T ss_dssp             HHHHH--HHHHHHHHHHHTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHcCCCeEEEEEEEeccccCC-CceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence            44443  4569999999998 999999999999999 79999999999 999999998 999999999999999999999


Q ss_pred             HHHHHhhh
Q psy9582         321 ILSISHLI  328 (329)
Q Consensus       321 ~~~~~~~~  328 (329)
                      ++.+.++|
T Consensus       301 ~~~~~~~l  308 (314)
T 3nep_X          301 LDDLQRLR  308 (314)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998876

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=100.00  E-value=1.1e-66  Score=483.98  Aligned_cols=302  Identities=18%  Similarity=0.254  Sum_probs=272.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~~~i~~~~~~~~al~   82 (329)
                      +.+||+|||| |.+|+++++.|+..++.+     +|+|+|++    ++++++.++||+|.. .+....+..+++ +++++
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~-----el~L~Di~----~~~~~g~a~DL~~~~~~~~~~~i~~~~d-~~~~~   86 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLAD-----ELALVDVI----EDKLKGEMMDLQHGSLFLKTPKIVSSKD-YSVTA   86 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSC----HHHHHHHHHHHHHTGGGCSCCEEEECSS-GGGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCc-----eEEEEeCC----hHHHHHHHHhhhhhhhccCCCeEEEcCC-HHHhC
Confidence            3589999998 999999999999998876     99999999    888999999999975 222234444444 78999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~l  161 (329)
                      |||+||+++|.|++|||+|.|++.+|+++++++++.|+++| |++|++++|||+|++|+++++++ ++|++|++|. |.|
T Consensus        87 ~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvvtNPvdi~t~~~~k~s-g~p~~rviG~gt~L  164 (331)
T 4aj2_A           87 NSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIVSNPVDILTYVAWKIS-GFPKNRVIGSGCNL  164 (331)
T ss_dssp             TEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTTHH
T ss_pred             CCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHHh-CCCHHHEEeecccc
Confidence            99999999999999999999999999999999999999997 99999999999999999999999 9999996555 999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC----ccchhhhHHHHHhhhhHHHHHh
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN----SFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~----~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |++|+++++|+++|++|++|+++ ||||||+++||+||+++++|+|+.+++++.    +....+++.+++++++++|++.
T Consensus       165 D~~R~~~~la~~lgv~~~~V~~~-ViGeHG~s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~  243 (331)
T 4aj2_A          165 DSARFRYLMGERLGVHPLSCHGW-VLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKL  243 (331)
T ss_dssp             HHHHHHHHHHHHHTSCGGGCBCC-EEBCSSTTCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHCEEe-EEecCCCceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhc
Confidence            99999999999999999999988 899999999999999999999999887421    0112379999999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||+++|+++.+  +..+++++++|+ .++|+|++++|+||+++|+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       244 kg~t~~a~a~a--~a~~~~ail~d~~~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~s~~  320 (331)
T 4aj2_A          244 KGYTSWAIGLS--VADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK-VTLTPDEEARLKKSAD  320 (331)
T ss_dssp             HSSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEEC-CCCCHHHHHHHHHHHH
T ss_pred             CCCCchhHHHH--HHHHHHHHHhCCCCeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEcc-CCCCHHHHHHHHHHHH
Confidence            99999877653  448999999998 999999999999999889999999999 999999999 9999999999999999


Q ss_pred             HHHHHHH
Q psy9582         316 ELKNEIL  322 (329)
Q Consensus       316 ~i~~~~~  322 (329)
                      +|++.++
T Consensus       321 ~l~~~~~  327 (331)
T 4aj2_A          321 TLWGIQK  327 (331)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9998543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=6e-66  Score=478.57  Aligned_cols=308  Identities=22%  Similarity=0.307  Sum_probs=274.0

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+|||| |++|+++++.|+..++++     ||+|+|++    ++++++.++|+.|.. ++..+++++.+.++++
T Consensus         2 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~-----el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~   70 (318)
T 1ez4_A            2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAE-----EFVIVDVV----KDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDC   70 (318)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHGGG-GGSCCCEEEECCGGGG
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHcCCCCC-----EEEEEeCC----chHHHHHHHHHHHHH-HhcCCeEEEECCHHHh
Confidence            677799999999 999999999999999887     99999999    788999999999986 5556677777789999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-ch
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LR  160 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~  160 (329)
                      +|||+||+++|.|+++|++|.+++.+|+++++++++.|+++| |++|++++|||+|++|+++++++ ++|++|++|. |.
T Consensus        71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~s-~~p~~rviG~gt~  148 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAANPVDILTYATWKFS-GFPKERVIGSGTS  148 (318)
T ss_dssp             TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTTH
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHHHHc-CCCHHHEEecccc
Confidence            999999999999999999999999999999999999999997 99999999999999999999999 9999997665 99


Q ss_pred             hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc---hhhhHHHHHhhhhHHHHHh
Q psy9582         161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW---NKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~---~~~~l~~~v~~~~~~i~~~  237 (329)
                      ||++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|.|+.+++++. .|   ..+++.+++++++++|++.
T Consensus       149 LD~~R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~eii~~  226 (318)
T 1ez4_A          149 LDSSRLRVALGKQFNVDPRSVDAY-IMGEHGDSEFAAYSTATIGTRPVRDVAKEQ-GVSDDDLAKLEDGVRNKAYDIINL  226 (318)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECC-EESSSSSSCEECGGGCEETTEEHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhCcChhHEEEE-EecccCCceEEEehhhcCCCeeHHHHhhcc-CCCHHHHHHHHHHHHHhhhhheeC
Confidence            999999999999999999999977 899999999999999999999999887543 34   3578888999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||.++++++. + +.+++++|++|+ .++|++++++|+||+| |+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       227 kg~t~~~~a~-a-~~~~~~ai~~~~~~~~~vs~~~~G~yg~~-~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~  302 (318)
T 1ez4_A          227 KGATFYGIGT-A-LMRISKAILRDENAVLPVGAYMDGQYGLN-DIYIGTPAIIGGTGLKQIIE-SPLSADELKKMQDSAA  302 (318)
T ss_dssp             HSCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CCcchHHHHH-H-HHHHHHHHHhCCCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHH
Confidence            9998887764 3 448999999998 9999999999999997 9999999999 999999999 9999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy9582         316 ELKNEILSISHLI  328 (329)
Q Consensus       316 ~i~~~~~~~~~~~  328 (329)
                      +|++.++.+.++|
T Consensus       303 ~l~~~~~~~~~~~  315 (318)
T 1ez4_A          303 TLKKVLNDGLAEL  315 (318)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998887

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=100.00  E-value=6.3e-66  Score=471.06  Aligned_cols=286  Identities=20%  Similarity=0.309  Sum_probs=257.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~   83 (329)
                      |||+|||| |+||+++|+.|+.+++++     ||+|+|++    +++++|.++||+|......  ..+..+. .+++++|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~-----el~L~Di~----~~~~~G~a~DL~h~~~~~~~~~~i~~~~-d~~~~~~   69 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVD-----EIALVDIA----EDLAVGEAMDLAHAAAGIDKYPKIVGGA-DYSLLKG   69 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCS-----EEEEECSS----HHHHHHHHHHHHHHHGGGTCCCEEEEES-CGGGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----CCcchhhhhhhhcccccCCCCCeEecCC-CHHHhCC
Confidence            69999998 999999999999999988     99999999    7889999999999763222  3444444 4899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~ld  162 (329)
                      ||+||++||.||+|||+|.|++..|+++++++++++.++| |+++++++|||+|++|+++++.+ ++|++| |+++|.||
T Consensus        70 aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd~~t~i~~k~s-g~p~~rvig~gT~LD  147 (294)
T 2x0j_A           70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYIMWKES-GKPRNEVFGMGNQLD  147 (294)
T ss_dssp             CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHHHHHHHHHS-SCCTTSEEECCHHHH
T ss_pred             CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcchhhHHhhHHHc-CCChhhEEEeeeEEe
Confidence            9999999999999999999999999999999999999998 99999999999999999999999 899888 56679999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS  242 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~  242 (329)
                      ++||+++++++++.++.  +.+ |||+||++++|+||++++.|.|           +.+++.+++++++++|++.||++.
T Consensus       148 s~R~~~~l~~~~~~~~~--~~~-V~G~HGdt~vp~~S~~~v~g~~-----------~~~~i~~~~~~~g~eIi~~kGst~  213 (294)
T 2x0j_A          148 SQRLKERLYNAGARNIR--RAW-IIGEHGDSMFVAKSLADFDGEV-----------DWEAVENDVRFVAAEVIKRKGATI  213 (294)
T ss_dssp             HHHHHHHHHHTTCEEEC--CCC-EEBCSSTTCEECGGGCCEESCC-----------CHHHHHHHHHTHHHHHHHHHSSCC
T ss_pred             HHHHHHHHhhcccCCcc--eeE-EEecCCCcEEEeeeccCCCCch-----------hHHHHHHHHhhhheEEEecCcccc
Confidence            99999999999987765  345 8999999999999999998753           235678889999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      |+++++  +.++++++++|+ +++|++++++|+||+ +|+|||+||++ ++|+ ++++ ++|+++|+++|++|++.||+.
T Consensus       214 ~a~a~a--~~~~~~ail~d~~~v~~~s~~l~g~yG~-~~v~~s~P~~lg~~Gv-ei~~-l~L~~~E~~~l~~s~~~lk~~  288 (294)
T 2x0j_A          214 FGPAVA--IYRMVKAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGA-EVAD-IKLSDEEIEKLRNSAKILRER  288 (294)
T ss_dssp             HHHHHH--HHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEE-EECC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHH--HHHHHHHHHcCCCcEEEEEEEEecCCCC-ccEEEEEEEEEeCCEE-EEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence            877654  348999999998 999999999999999 79999999999 9998 5888 999999999999999999998


Q ss_pred             HHH
Q psy9582         321 ILS  323 (329)
Q Consensus       321 ~~~  323 (329)
                      ++.
T Consensus       289 i~~  291 (294)
T 2x0j_A          289 LEE  291 (294)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            875

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=100.00  E-value=2.9e-65  Score=477.00  Aligned_cols=326  Identities=59%  Similarity=1.009  Sum_probs=290.8

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |.++++||+||||+|++|++++..|+..++++.+++.+|+|+|++.+..++++++.++|+.|...++..+++.+++.+++
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA   80 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence            44557899999988999999999999998876544559999999711013456788999998644555678888888999


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEech
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLR  160 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~  160 (329)
                      ++|||+||+++|.++++|++|.+++.+|+++++++++.++++|+|++++|++|||+|++|++++++++++|++|++|+|.
T Consensus        81 l~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~  160 (329)
T 1b8p_A           81 FKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLR  160 (329)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCH
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeec
Confidence            99999999999999999999999999999999999999999965999999999999999999999988999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCC
Q psy9582         161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA  240 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~  240 (329)
                      ||+.|+++++|+++|++|++|+.++|||+||++++|+||+++++|.|+.++++++ .|..+++.+++++++++|++.||+
T Consensus       161 Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s~~p~~s~~~v~g~~~~~~~~~~-~~~~~~i~~~v~~~g~eii~~kg~  239 (329)
T 1b8p_A          161 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDD-AWNRDTFLPTVGKRGAAIIDARGV  239 (329)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTTCEEECSSCEETTEEHHHHHCCH-HHHHHTHHHHHHTHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHhCcCHHHceEEEEEeccCCcEeeehHHCeECCeeHHHHhccc-hhhHHHHHHHHHHHHHhhhhccCC
Confidence            9999999999999999999999766899999999999999999999999887654 566789999999999999999998


Q ss_pred             ccHHHHHHHHHHHHHHHHhCC-C-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGT-E-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~-~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      +++++++.+++ +++++|++| + +++|++++++|+||+|+|+|||+||++++|+++++++++|+++|+++|++|+++|+
T Consensus       240 ~~~~~~a~a~~-~~~~ai~~~~~~~~~~~s~~~~g~yg~~~~~~~s~P~~i~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~  318 (329)
T 1b8p_A          240 SSAASAANAAI-DHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELL  318 (329)
T ss_dssp             CCHHHHHHHHH-HHHHHHHHCCTTCCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHH-HHHHHHhcCCCCcEEEEEEEecCccCCCCCeEEEEEEEEcCCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence            88888776555 566666655 7 99999999999999999999999999999999999768999999999999999999


Q ss_pred             HHHHHHHhhh
Q psy9582         319 NEILSISHLI  328 (329)
Q Consensus       319 ~~~~~~~~~~  328 (329)
                      +.++.+.++|
T Consensus       319 ~~~~~~~~~~  328 (329)
T 1b8p_A          319 EEQNGVQHLL  328 (329)
T ss_dssp             HHHHHHGGGG
T ss_pred             HHHHHHHHhh
Confidence            9999999887

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=100.00  E-value=1.7e-65  Score=475.36  Aligned_cols=306  Identities=21%  Similarity=0.320  Sum_probs=271.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~   82 (329)
                      .+||+|||| |.+|+++++.|+..++.      +|+|+|++    ++++++.++|++|.....  ..+++.+++ +++++
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~------~v~l~Di~----~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~   72 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLG------DVVLFDIA----QGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLE   72 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCC------EEEEECSS----SSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCc------eEEEEeCC----hHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHC
Confidence            479999998 99999999999998873      89999999    778889999999875322  234555555 79999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEec-hh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML-RL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t-~l  161 (329)
                      |||+||+++|.|++||++|.|++.+|++++++++++|.++| |+++++++|||+|++|+++++++ ++|++|++|+| .|
T Consensus        73 ~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~s-g~p~~rviG~~~~L  150 (321)
T 3p7m_A           73 NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLDIMVNMLQKFS-GVPDNKIVGMAGVL  150 (321)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEEEECHHH
T ss_pred             CCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHhc-CCCHHHEEeeccch
Confidence            99999999999999999999999999999999999999998 99999999999999999999998 99999987765 99


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHHhcC
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIISIRG  239 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~~kg  239 (329)
                      |++|+++++|+++|++|++|+++ ||||||++++|+||+++++|+|+.++++..  +....+++.+++++++++|++.||
T Consensus       151 D~~R~~~~la~~l~v~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~g  229 (321)
T 3p7m_A          151 DSARFRTFLADELNVSVQQVQAY-VMGGHGDTMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALLK  229 (321)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECTTTCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhCcCHHHceEe-eecCcCCceeeeeeeceECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhcC
Confidence            99999999999999999999988 799999999999999999999999987432  011346788889999999999655


Q ss_pred             --CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecC-CCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHH
Q psy9582         240 --ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSD-GSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSI  314 (329)
Q Consensus       240 --~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~-g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~  314 (329)
                        .+.|+++. + +.+++++|++|+ +|+|||++++ |+||+|+|+|||+||++ ++|++++ + ++|+++|+++|++|+
T Consensus       230 ~gsa~~~~a~-a-~~~~~~ail~~~~~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~-l~L~~~E~~~l~~s~  305 (321)
T 3p7m_A          230 TGSAYYAPAA-A-GIQMAESFLKDKKMILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-E-VEISDKEREQLQVSI  305 (321)
T ss_dssp             SSCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-C-CCCCHHHHHHHHHHH
T ss_pred             CCChHHHHHH-H-HHHHHHHHHcCCCcEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-C-CCCCHHHHHHHHHHH
Confidence              44454443 3 458999999998 9999999999 99999889999999999 9999999 8 999999999999999


Q ss_pred             HHHHHHHHHHHhhhC
Q psy9582         315 EELKNEILSISHLIR  329 (329)
Q Consensus       315 ~~i~~~~~~~~~~~~  329 (329)
                      ++|++.++.+.++|.
T Consensus       306 ~~l~~~~~~~~~~l~  320 (321)
T 3p7m_A          306 NAIKDLNKAAAEILA  320 (321)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999998873

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-65  Score=474.16  Aligned_cols=302  Identities=24%  Similarity=0.374  Sum_probs=272.9

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~   77 (329)
                      ||++.+||+|||| |.+|+++++.|+..++ +     +|+|+|++  +.++++++.++|+.|.. ++   ..+++.+++ 
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~-~-----~v~l~D~~--~~~~~~~g~a~dl~~~~-~~~~~~~~i~~t~d-   72 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKEL-A-----DVVLVDIP--QLENPTKGKALDMLEAS-PVQGFDANIIGTSD-   72 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTC-C-----EEEEECCG--GGHHHHHHHHHHHHHHH-HHHTCCCCEEEESC-
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCC-C-----eEEEEecc--chHHHHHHhhhhHHHhh-hhccCCCEEEEcCC-
Confidence            6666789999998 9999999999999988 7     99999998  22456788999999864 22   235666555 


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      +++++|||+||+++|.|++||++|.+++.+|+++++++++.+.++| |++|++++|||+|++|+++++++ ++|++|++|
T Consensus        73 ~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvsNPvd~~t~~~~k~s-g~p~~rviG  150 (315)
T 3tl2_A           73 YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLTNPVDAMTYSVFKEA-GFPKERVIG  150 (315)
T ss_dssp             GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEEE
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECCChHHHHHHHHHHhc-CCChHHEEe
Confidence            7999999999999999999999999999999999999999999998 99999999999999999999998 899999777


Q ss_pred             e-chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHH
Q psy9582         158 M-LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIIS  236 (329)
Q Consensus       158 ~-t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~  236 (329)
                      . |.||++|+++++|+++|++|++|+++ ||||||+++||+||+++++|+|+.++++++   ..+++.+++++++++|++
T Consensus       151 ~gt~LD~~R~~~~la~~lgv~~~~v~~~-viG~Hg~t~vp~~S~~~v~g~p~~~~~~~~---~~~~i~~~v~~~g~eii~  226 (315)
T 3tl2_A          151 QSGVLDTARFRTFIAQELNLSVKDITGF-VLGGHGDDMVPLVRYSYAGGIPLETLIPKE---RLEAIVERTRKGGGEIVG  226 (315)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGEECC-EEBCSGGGCEECGGGCEETTEEGGGTSCHH---HHHHHHHHHHTHHHHHHH
T ss_pred             eccCcHHHHHHHHHHHHhCcCHHHceee-EecCCCCcceeecccCeECCEEHHHhCCHH---HHHHHHHHHHHHHHHHHH
Confidence            6 99999999999999999999999998 799999999999999999999999987654   357999999999999999


Q ss_pred             --hcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582         237 --IRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL  312 (329)
Q Consensus       237 --~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~  312 (329)
                        +||++.|++++  ++.+++++|++|+ +|+|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++
T Consensus       227 ~~~kgst~~a~a~--a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~~g~~Gv~~v~~-l~L~~~E~~~l~~  302 (315)
T 3tl2_A          227 LLGNGSAYYAPAA--SLVEMTEAILKDQRRVLPAIAYLEGEYGY-SDLYLGVPVILGGNGIEKIIE-LELLADEKEALDR  302 (315)
T ss_dssp             HHSSSCCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHH
T ss_pred             hcCCCcchHHHHH--HHHHHHHHHHcCCCcEEEEEEeccCccCC-CceEEEEEEEEeCCEEEEEcC-CCCCHHHHHHHHH
Confidence              77777776654  3458999999998 999999999999999 79999999999 999999998 9999999999999


Q ss_pred             HHHHHHHHHHH
Q psy9582         313 SIEELKNEILS  323 (329)
Q Consensus       313 s~~~i~~~~~~  323 (329)
                      |+++|++.++.
T Consensus       303 s~~~l~~~~~~  313 (315)
T 3tl2_A          303 SVESVRNVMKV  313 (315)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHHH
Confidence            99999998763

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=3.6e-65  Score=474.68  Aligned_cols=307  Identities=20%  Similarity=0.317  Sum_probs=274.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +++||+|||| |++|+++++.|+..++++     ||+|+|++    ++++++.++|+.|.. ++..+++++.+.+++++|
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~-----el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~   76 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQ-----EIGIVDIF----KDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD   76 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSC----HHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCC-----EEEEEeCC----chHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC
Confidence            4589999999 999999999999999876     99999999    788999999999976 555667777778999999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|+++|++|.+++.+|+++++++++.|+++| |++|++++|||+|++|+++++++ ++|++|++|. |.||
T Consensus        77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~s-~~p~~rviG~gt~LD  154 (326)
T 2zqz_A           77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVDILTYATWKLS-GFPKNRVVGSGTSLD  154 (326)
T ss_dssp             CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTTHHH
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHHc-CCCHHHEEEccccch
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 9999997665 9999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhc-cCccc---hhhhHHHHHhhhhHHHHHhc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN-NNSFW---NKNVFLPAISRRGEEIISIR  238 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~-~~~~~---~~~~l~~~v~~~~~~i~~~k  238 (329)
                      ++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|+.++++ +. .|   ..+++.+++++++++|++.|
T Consensus       155 ~~R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~~~~e~~~~~~-~~~~~~~~~i~~~v~~~g~eii~~k  232 (326)
T 2zqz_A          155 TARFRQSIAEMVNVDARSVHAY-IMGEHGDTEFPVWSHANIGGVTIAEWVKAHP-EIKEDKLVKMFEDVRDAAYEIIKLK  232 (326)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECGGGCEETTEEHHHHHHHCT-TSCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCChhheEEE-EecccCCceEeehhhceECCEEHHHhhcccc-cCCHHHHHHHHHHHHHhHHHHHHcC
Confidence            9999999999999999999976 8999999999999999999999998875 32 24   34689999999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      |.++++++. + +.+++++|++|+ .++|++++++|+||+| |+|||+||++ ++|++++++ ++|+++|+++|++|+++
T Consensus       233 G~t~~~~a~-a-a~~~~~ai~~~~~~~~~vsv~~~G~yg~~-~~~~svP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~  308 (326)
T 2zqz_A          233 GATFYGIAT-A-LARISKAILNDENAVLPLSVYMDGQYGLN-DIYIGTPAVINRNGIQNILE-IPLTDHEEESMQKSASQ  308 (326)
T ss_dssp             SCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             CCcHHHHHH-H-HHHHHHHHHhCCCcEEEEEEeccCccCCC-ceEEEEEEEEcCCeeEEEec-CCCCHHHHHHHHHHHHH
Confidence            998887764 3 348999999998 9999999999999997 9999999999 999999998 99999999999999999


Q ss_pred             HHHHHHHHHhhhC
Q psy9582         317 LKNEILSISHLIR  329 (329)
Q Consensus       317 i~~~~~~~~~~~~  329 (329)
                      |++.++.+.++|+
T Consensus       309 l~~~~~~~~~~~~  321 (326)
T 2zqz_A          309 LKKVLTDAFAKND  321 (326)
T ss_dssp             HHHHHHHHC----
T ss_pred             HHHHHHHHHHhhh
Confidence            9999999998874

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=100.00  E-value=5.3e-65  Score=466.30  Aligned_cols=286  Identities=20%  Similarity=0.308  Sum_probs=262.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~~   83 (329)
                      |||+|||| |++|+++++.|+..++++     +|+|+|++    ++++++.++|++|....+  ..+++.+++ +++++|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~-----~v~L~D~~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~   69 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVD-----EIALVDIA----EDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG   69 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCS-----EEEEECSS----HHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----eEEEEECC----hHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC
Confidence            58999999 999999999999998876     99999999    778889999999876322  246666777 899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|++||++|.+++.+|++++++++++|.++| |+++++++|||+|++|+++++++ ++|++|++|. |.||
T Consensus        70 aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvsNPvd~~t~~~~k~~-g~p~~rviG~gt~LD  147 (294)
T 1oju_A           70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYIMWKES-GKPRNEVFGMGNQLD  147 (294)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHHHHHHHHHS-CCCTTSEEECSHHHH
T ss_pred             CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcchHHHHHHHHhc-CCCHHHEeecccccH
Confidence            9999999999999999999999999999999999999997 99999999999999999999998 9999997776 8999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS  242 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~  242 (329)
                      ++|+++++| ++|++|++ +.+ ||||||+++||+||+++++|.|       +    .+++.+++++++++|++.||+++
T Consensus       148 ~~R~~~~la-~l~v~~~~-~~~-V~G~Hg~t~vp~~s~~~v~g~~-------~----~~~~~~~v~~~g~eii~~kG~t~  213 (294)
T 1oju_A          148 SQRLKERLY-NAGARNIR-RAW-IIGEHGDSMFVAKSLADFDGEV-------D----WEAVENDVRFVAAEVIKRKGATI  213 (294)
T ss_dssp             HHHHHHHHH-HTTCBSCC-CCC-EEBCSSTTCEECGGGCCCBSCC-------C----HHHHHHHHHTTHHHHHHHHSSCC
T ss_pred             HHHHHHHHH-HhCCCccC-ceE-EEecCCCceeeecccceECCcC-------h----HHHHHHHHHHHHHHHHHhcCCcc
Confidence            999999999 99999999 877 8999999999999999999987       1    36899999999999999999888


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      |+++.+  +.+++++|++|+ +|+|||++++|+||++ |+|||+||++ ++|++ +++ ++|+++|+++|++|+++|++.
T Consensus       214 ~~~a~a--~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~~~~s~P~~~g~~Gv~-v~~-l~L~~~E~~~l~~s~~~l~~~  288 (294)
T 1oju_A          214 FGPAVA--IYRMVKAVVEDTGEIIPTSMILQGEYGIE-NVAVGVPAKLGKNGAE-VAD-IKLSDEEIEKLRNSAKILRER  288 (294)
T ss_dssp             HHHHHH--HHHHHHHHHTTCCCEEEEEEEEESGGGCE-EEEEEEEEEEETTEEE-ECC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHH--HHHHHHHHHcCCCeEEEEEecccccCCCC-ceEEEEEEEEeCCEEE-Eec-CCCCHHHHHHHHHHHHHHHHH
Confidence            876643  458999999998 9999999999999995 9999999999 99999 888 999999999999999999999


Q ss_pred             HHH
Q psy9582         321 ILS  323 (329)
Q Consensus       321 ~~~  323 (329)
                      ++.
T Consensus       289 ~~~  291 (294)
T 1oju_A          289 LEE  291 (294)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            875

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=100.00  E-value=2.8e-65  Score=476.65  Aligned_cols=306  Identities=25%  Similarity=0.304  Sum_probs=266.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+||||+|+||+++++.++..++..     ||+|+|++    ++++++.++||+|..++ ..++.++++.+++++||
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~-----evvLiDi~----~~k~~g~a~DL~~~~~~-~~~i~~t~d~~~al~dA   77 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTP-----NLCLYDPF----AVGLEGVAEEIRHCGFE-GLNLTFTSDIKEALTDA   77 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCS-----CEEEECSC----HHHHHHHHHHHHHHCCT-TCCCEEESCHHHHHTTE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCC-----EEEEEeCC----chhHHHHHHhhhhCcCC-CCceEEcCCHHHHhCCC
Confidence            3799999988999999999999998866     89999999    78899999999997532 24677788888999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeE-EEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVK-VLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~-viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds  163 (329)
                      |+||+++|.|+++|++|.+++.+|++++++++++++++| |+++ ++++|||+|++|+++++++ ++|++||+++|.||+
T Consensus        78 DvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPvd~~t~i~~k~s-g~p~~rv~g~t~LDs  155 (343)
T 3fi9_A           78 KYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPADITGLVTLIYS-GLKPSQVTTLAGLDS  155 (343)
T ss_dssp             EEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSHHHHHHHHHHHH-TCCGGGEEEECCHHH
T ss_pred             CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCchHHHHHHHHHHc-CCCcceEEEecCcHH
Confidence            999999999999999999999999999999999999998 9996 8999999999999999999 899999989999999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIISIRGAS  241 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~~kg~~  241 (329)
                      +|+++++|+++|++|++|+..+||||||++++|+||+++|+|+|+.+++...  +....+++.+++++++++|++.||++
T Consensus       156 ~R~~~~la~~l~v~~~~v~~~~ViGeHgds~vp~~S~a~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kg~s  235 (343)
T 3fi9_A          156 TRLQSELAKHFGIKQSLVTNTRTYGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLRGRS  235 (343)
T ss_dssp             HHHHHHHHHHHTSCGGGEECCCEEESSGGGEEECGGGCEETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHhCcCHHHcccceEEEcCCCceeeeeecceECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHccCCC
Confidence            9999999999999999998433899999999999999999999999886432  01134589999999999999999998


Q ss_pred             cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCC--CCHHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLE--IDKFSRKKINLSIEEL  317 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~--l~~~E~~~l~~s~~~i  317 (329)
                      +|++.|.+++ ++++++++|+ .++|+|++.+|+| . +|+|||+||++ ++|++.+ + ++  |+++|+++|++|++.|
T Consensus       236 s~~s~A~a~~-~~~~ail~d~~~v~~~s~~~~g~~-~-~~v~~s~P~~lg~~Gv~~~-~-~~~ll~~~E~~~l~~Sa~~l  310 (343)
T 3fi9_A          236 SFQSPSYVSI-EMIRAAMGGEAFRWPAGCYVNVPG-F-EHIMMAMETTITKDGVKHS-D-INQLGNEAERAALKESYSHL  310 (343)
T ss_dssp             CCHHHHHHHH-HHHHHHTTSSCCCSCEEEEEEETT-E-EEEEEEESEEEETTEEEEC-C-GGGSSCHHHHHHHHHHHHHH
T ss_pred             cHHhHHHHHH-HHHHHHHhCCCceEEEEEEEeCCC-c-CceEEEeEEEEeCCceEEE-e-cCCCCCHHHHHHHHHHHHHH
Confidence            8877666554 7899999998 9999999999864 4 79999999999 9999876 4 45  8999999999999999


Q ss_pred             HHHHHHHHhh
Q psy9582         318 KNEILSISHL  327 (329)
Q Consensus       318 ~~~~~~~~~~  327 (329)
                      ++.++.+.++
T Consensus       311 ~~~~~~~~~l  320 (343)
T 3fi9_A          311 AKLRDEVIAM  320 (343)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHc
Confidence            9999988773

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=100.00  E-value=1.1e-64  Score=469.83  Aligned_cols=303  Identities=22%  Similarity=0.342  Sum_probs=265.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~al~   82 (329)
                      .+||+|||| |++|+++++.|+..++ .     +|+|+|++    ++++++.++|++|....  ...++..+++ +++++
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~-~-----~v~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~v~~t~d-~~a~~   74 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKEL-G-----DVVLFDIA----EGTPQGKGLDIAESSPVDGFDAKFTGAND-YAAIE   74 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-C-----EEEEECSS----SSHHHHHHHHHHHHHHHHTCCCCEEEESS-GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-C-----eEEEEeCC----chhHHHHHHHHhchhhhcCCCCEEEEeCC-HHHHC
Confidence            479999999 9999999999999987 3     89999999    77888999999987521  2235666666 69999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEec-hh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML-RL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t-~l  161 (329)
                      |||+||+++|.|++||++|.|++.+|++++++++++|+++| |+++++++|||+|++|+++++++ ++|++|++|+| .|
T Consensus        75 ~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPvd~~t~~~~k~s-g~p~~rviG~~~~L  152 (324)
T 3gvi_A           75 GADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPLDAMVWALQKFS-GLPAHKVVGMAGVL  152 (324)
T ss_dssp             TCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEEECCHHH
T ss_pred             CCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCcHHHHHHHHHhc-CCCHHHEEeecCcc
Confidence            99999999999999999999999999999999999999998 99999999999999999999998 99999988876 89


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHHhcC
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIISIRG  239 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~~kg  239 (329)
                      |++|+++++|+++|++|++|+.+ |||+||+++||+||+++++|+|+.++++..  +....+++.+++++++++|++.||
T Consensus       153 D~~R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~g  231 (324)
T 3gvi_A          153 DSARFRYFLSEEFNVSVEDVTVF-VLGGHGDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLK  231 (324)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhCcCHHHCeEE-EEcCCCCceeeehhhCeECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhcC
Confidence            99999999999999999999988 799999999999999999999999987432  011356788899999999999654


Q ss_pred             --CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         240 --ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       240 --~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                        ++.|++++  ++.+++++|++|+ +|+|||++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       232 kgsa~~~~a~--a~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~v~~s~P~~~g~~Gv~~v~~-l~L~~~E~~~l~~s~~  307 (324)
T 3gvi_A          232 TGSAFYAPAA--SAIQMAESYLKDKKRVLPVAAQLSGQYGVK-DMYVGVPTVIGANGVERIIE-IDLDKDEKAQFDKSVA  307 (324)
T ss_dssp             SCCCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHH--HHHHHHHHHHcCCCcEEEEEEEecCccCCC-ceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHH
Confidence              44454443  3458999999998 9999999999999995 9999999999 999999998 9999999999999999


Q ss_pred             HHHHHHHHHHh
Q psy9582         316 ELKNEILSISH  326 (329)
Q Consensus       316 ~i~~~~~~~~~  326 (329)
                      +|++.++.+.+
T Consensus       308 ~l~~~~~~~~~  318 (324)
T 3gvi_A          308 SVAGLCEACIG  318 (324)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999998765

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=100.00  E-value=1.3e-63  Score=461.65  Aligned_cols=301  Identities=19%  Similarity=0.228  Sum_probs=274.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||| |++|++++..|+..++++     ||+|+|++    ++++++.++|+.|.. ++..+++++.+.+++++|||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~-----el~L~Di~----~~k~~g~a~dl~~~~-~~~~~~~v~~~~~~a~~~aD   69 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAR-----EVVLVDLD----RKLAQAHAEDILHAT-PFAHPVWVWAGSYGDLEGAR   69 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS----HHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGTTEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----hhHHHHHHHHHHHhH-hhcCCeEEEECCHHHhCCCC
Confidence            58999999 999999999999999887     99999999    788999999999976 44455566556799999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHHH
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDHN  164 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~  164 (329)
                      +||+++|.|+++|++|.+++.+|+++++++++.|+++| |++|++++|||+|++|+++++.+ ++|++|++|. |.||++
T Consensus        70 ~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~s-~~p~~rviG~gt~LD~~  147 (310)
T 2xxj_A           70 AVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVATNPVDVMTQVAYALS-GLPPGRVVGSGTILDTA  147 (310)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHH-TCCGGGEEECTTHHHHH
T ss_pred             EEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHHc-CCCHHHEEecCcchhHH
Confidence            99999999999999999999999999999999999997 99999999999999999999999 9999997665 999999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc-cc---hhhhHHHHHhhhhHHHHHhcCC
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS-FW---NKNVFLPAISRRGEEIISIRGA  240 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~-~~---~~~~l~~~v~~~~~~i~~~kg~  240 (329)
                      |+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|+.+++++.. .|   ..+++.+++++++++|++.||.
T Consensus       148 R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~  226 (310)
T 2xxj_A          148 RFRALLAEYLRVAPQSVHAY-VLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGA  226 (310)
T ss_dssp             HHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCcCHHHeEEE-EecccCCccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhccCC
Confidence            99999999999999999985 8999999999999999999999998865420 13   4578888999999999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      ++++++. + +.+++++|++|+ .++|++++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|+++|+
T Consensus       227 t~~~~a~-a-~~~~~~ai~~~~~~~~~vs~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~  302 (310)
T 2xxj_A          227 TYYGIGA-G-LARLVRAILTDEKGVYTVSAFTPEVAGV-LEVSLSLPRILGAGGVAGTVY-PSLSPEERAALRRSAEILK  302 (310)
T ss_dssp             CCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEEEETTE-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHH-H-HHHHHHHHHcCCCCEEEEEEEEcCccCC-ccEEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence            8887754 3 348999999998 999999999999999 89999999999 999999999 9999999999999999999


Q ss_pred             HHHHHH
Q psy9582         319 NEILSI  324 (329)
Q Consensus       319 ~~~~~~  324 (329)
                      +.++.+
T Consensus       303 ~~~~~~  308 (310)
T 2xxj_A          303 EAAFAL  308 (310)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999865

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=100.00  E-value=1.2e-63  Score=463.66  Aligned_cols=305  Identities=20%  Similarity=0.331  Sum_probs=275.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~   82 (329)
                      +++||+|||| |++|++++..|+..++++     ||+|+|++    ++++++.++|+.|.. ++. .+++++.+.+++++
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~-----ei~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~~v~~~~~~a~~   73 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVD-----ELVIIDLD----TEKVRGDVMDLKHAT-PYSPTTVRVKAGEYSDCH   73 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCS-----EEEEECSC----HHHHHHHHHHHHHHG-GGSSSCCEEEECCGGGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----hhHhhhhhhhHHhhh-hhcCCCeEEEeCCHHHhC
Confidence            4589999999 999999999999988876     99999999    778899999999874 544 45566667799999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~l  161 (329)
                      |||+||+++|.|+++|++|.+++.+|+++++++++.|+++| |++|++++|||+|++|+++++++ ++|++|++|. |.|
T Consensus        74 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~k~~-~~p~~rviG~gt~l  151 (317)
T 3d0o_A           74 DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVATNPVDILAYATWKFS-GLPKERVIGSGTIL  151 (317)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTTHH
T ss_pred             CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCcHHHHHHHHHHHh-CCCHHHEEecCccc
Confidence            99999999999999999999999999999999999999997 99999999999999999999999 9999997665 999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc---hhhhHHHHHhhhhHHHHHhc
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW---NKNVFLPAISRRGEEIISIR  238 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~---~~~~l~~~v~~~~~~i~~~k  238 (329)
                      |++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|+.+++++. .|   ..+++.+++++++++|++.|
T Consensus       152 D~~r~~~~la~~l~v~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~eii~~k  229 (317)
T 3d0o_A          152 DSARFRLLLSEAFDVAPRSVDAQ-IIGEHGDTELPVWSHANIAGQPLKTLLEQR-PEGKAQIEQIFVQTRDAAYDIIQAK  229 (317)
T ss_dssp             HHHHHHHHHHHHHTSCGGGCBCC-EEBCSSTTCEECTTTCEETTEEHHHHHHTS-TTHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCcChhhEEEE-EEecCCCCeeEeeeccccCCEEHHHHhhcc-CCCHHHHHHHHHHHHhhhhEEEeCC
Confidence            99999999999999999999977 899999999999999999999999887543 34   34678889999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      |.++++++. + +.+++++|++|+ +++|++++++|+||+| |+|||+||++ ++|++++++ ++|+++|+++|++|+++
T Consensus       230 g~~~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g~~g~~-~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~  305 (317)
T 3d0o_A          230 GATYYGVAM-G-LARITEAIFRNEDAVLTVSALLEGEYEEE-DVYIGVPAVINRNGIRNVVE-IPLNDEEQSKFAHSAKT  305 (317)
T ss_dssp             SCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             CCchHhHHH-H-HHHHHHHHHcCCCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHHHHHH
Confidence            998887764 2 448999999998 9999999999999997 9999999999 999999999 99999999999999999


Q ss_pred             HHHHHHHHHhh
Q psy9582         317 LKNEILSISHL  327 (329)
Q Consensus       317 i~~~~~~~~~~  327 (329)
                      |++.++.+.++
T Consensus       306 l~~~~~~~~~~  316 (317)
T 3d0o_A          306 LKDIMAEAEEL  316 (317)
T ss_dssp             HHHHHHC----
T ss_pred             HHHHHHHHHcc
Confidence            99999877643

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.4e-63  Score=463.07  Aligned_cols=307  Identities=22%  Similarity=0.341  Sum_probs=264.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |+++++||+|||| |++|++++..|+..++++     ||+|+|++    ++++++.++|+.|.. ++..+++++.+.+++
T Consensus         3 m~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~-----ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a   71 (318)
T 1y6j_A            3 MVKSRSKVAIIGA-GFVGASAAFTMALRQTAN-----ELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGDYSD   71 (318)
T ss_dssp             ----CCCEEEECC-SHHHHHHHHHHHHTTCSS-----EEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--CGGG
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECCHHH
Confidence            4445789999999 999999999999999887     99999999    788899999999976 555566666566899


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-c
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-L  159 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t  159 (329)
                      ++|||+||+++|.|+++|++|.+++.+|+++++++++.|.++| |++|++++|||+|++|+++++++ ++|++|++|. |
T Consensus        72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~k~s-~~p~~rviG~gt  149 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVSNPVDIITYMIQKWS-GLPVGKVIGSGT  149 (318)
T ss_dssp             GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECSSSHHHHHHHHHHHH-TCCTTTEEECTT
T ss_pred             hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEecCcHHHHHHHHHHHc-CCCHHHEeccCC
Confidence            9999999999999999999999999999999999999999997 99999999999999999999999 9999997665 9


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC-ccc---hhhhHHHHHhhhhHHHH
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN-SFW---NKNVFLPAISRRGEEII  235 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~-~~~---~~~~l~~~v~~~~~~i~  235 (329)
                      .||++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|.|+.+++++. ..|   ..+++.+++++++++|+
T Consensus       150 ~Ld~~r~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii  228 (318)
T 1y6j_A          150 VLDSIRFRYLLSEKLGVDVKNVHGY-IIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATII  228 (318)
T ss_dssp             HHHHHHHHHHHHTTTTCCTTTEECC-EEBCSSSSCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhCCCHHHeEEE-EecccCCcEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHh
Confidence            9999999999999999999999985 899999999999999999999998876431 012   24789999999999999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      +.||.++++++. + +.+++++|++|+ +++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus       229 ~~kg~t~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s  304 (318)
T 1y6j_A          229 KNKGATYYGIAV-S-INTIVETLLKNQNTIRTVGTVINGMYGI-EDVAISLPSIVNSEGVQEVLQ-FNLTPEEEEALRFS  304 (318)
T ss_dssp             HHTSCCCHHHHH-H-HHHHHHHHHHTCCCEECCEEEECSBTTB-CSEEEECCEEEETTEEEECCC-CCCCHHHHHHHHHH
T ss_pred             hCCCccHHHHHH-H-HHHHHHHHHcCCCcEEEEEEeecCccCC-cceEEEEEEEEcCCeeEEEec-CCCCHHHHHHHHHH
Confidence            999998887754 3 348899999888 999999999999999 89999999999 999999999 99999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         314 IEELKNEILSIS  325 (329)
Q Consensus       314 ~~~i~~~~~~~~  325 (329)
                      +++|++.++.+.
T Consensus       305 ~~~l~~~~~~~~  316 (318)
T 1y6j_A          305 AEQVKKVLNEVK  316 (318)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=100.00  E-value=6.1e-64  Score=463.35  Aligned_cols=301  Identities=21%  Similarity=0.359  Sum_probs=275.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCcccccCCc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPITAFKDA   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~al~~a   84 (329)
                      ||+|||| |++|+++++.|+..++ +     ||+|+|++    ++++++.++|+.|....  ...+++.+++ +++++||
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l-~-----el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~a   68 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGY-D-----DLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNS-YEDMRGS   68 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC-S-----CEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCC-C-----EEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCC-HHHhCCC
Confidence            7999999 9999999999998888 6     89999999    78889999999986422  2235666666 6899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds  163 (329)
                      |+||+++|.|++||++|.+++.+|++++++++++++++| |++|+|++|||+|++|+++++++ ++|++|++|+ |.||+
T Consensus        69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~~-~~p~~rviG~gt~LD~  146 (308)
T 2d4a_B           69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNPVDAMTYVMYKKT-GFPRERVIGFSGILDS  146 (308)
T ss_dssp             SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEEECCHHHHH
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHhc-CCChhhEEEecccchH
Confidence            999999999999999999999999999999999999998 99999999999999999999997 9999998777 99999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcC-Ccc
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRG-ASS  242 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg-~~~  242 (329)
                      +|+++++|+++|++|++|+.+ ||||||++++|+||+++++|.|+.+++.++   ..+++.+++++++++|++.|| .+.
T Consensus       147 ~R~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p~~s~~~v~g~~~~~~~~~~---~~~~~~~~v~~~g~eii~~kg~s~~  222 (308)
T 2d4a_B          147 ARMAYYISQKLGVSFKSVNAI-VLGMHGQKMFPVPRLSSVGGVPLEHLMSKE---EIEEVVSETVNAGAKITELRGYSSN  222 (308)
T ss_dssp             HHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHSCHH---HHHHHHHHHHTHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHhCcChhHeEEE-EEeccCCceeeeehhccCCCEEHHHHcCHH---HHHHHHHHHHHhhHhhhhCCCCccH
Confidence            999999999999999999988 899999999999999999999999987654   458899999999999999999 766


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      ++++. + +.+++++|++|+ +++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++.
T Consensus       223 ~~~a~-a-~~~~~~ai~~~~~~v~~vs~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~  298 (308)
T 2d4a_B          223 YGPAA-G-LVLTVEAIKRDSKRIYPYSLYLQGEYGY-NDIVAEVPAVIGKSGIERIIE-LPLTEDEKRKFDEAVQAVKKL  298 (308)
T ss_dssp             HHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-H-HHHHHHHHHhCCCcEEEEEEEEcCccCC-CceEEEEEEEEcCCceEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence            65544 3 348999999998 999999999999999 89999999999 999999999 999999999999999999999


Q ss_pred             HHHHHhhhC
Q psy9582         321 ILSISHLIR  329 (329)
Q Consensus       321 ~~~~~~~~~  329 (329)
                      ++.+.++||
T Consensus       299 ~~~~~~~l~  307 (308)
T 2d4a_B          299 VETLPPQLR  307 (308)
T ss_dssp             HHTSCHHHH
T ss_pred             HHHHHHHhc
Confidence            999888875

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=100.00  E-value=1.7e-61  Score=446.53  Aligned_cols=297  Identities=20%  Similarity=0.344  Sum_probs=269.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec--CCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA--SNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~--~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +||+||||+|++|++++..|+..++..     |++|+|+  +    ++++++.++|+.|... +..+++++.+.+++++|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~-----el~L~Di~~~----~~~~~~~~~dl~~~~~-~~~~~~v~~~~~~a~~~   70 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIAD-----EVVFVDIPDK----EDDTVGQAADTNHGIA-YDSNTRVRQGGYEDTAG   70 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCS-----EEEEECCGGG----HHHHHHHHHHHHHHHT-TTCCCEEEECCGGGGTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEcCCCC----hhhHHHHHHHHHHHHh-hCCCcEEEeCCHHHhCC
Confidence            589999977999999999999888765     8999999  7    6677888899998764 44455665556899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.++++|++|.+++.+|+++++++++.+++++ |+++++++|||+|++|+++++++ ++|++|++|+ |.||
T Consensus        71 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv~~~~~~~~~~~-~~p~~rviG~gt~Ld  148 (303)
T 1o6z_A           71 SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVDLLNRHLYEAG-DRSREQVIGFGGRLD  148 (303)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHHHHHHHHHHHS-SSCGGGEEECCHHHH
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHHc-CCCHHHeeecccchh
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 9999998777 9999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS  242 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~  242 (329)
                      ++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|  +++.++   ..+++.+++++++++|++.||.++
T Consensus       149 ~~r~~~~la~~l~v~~~~v~~~-v~G~HG~~~~p~~s~~~v~g~p--~~~~~~---~~~~~~~~v~~~g~eii~~kg~~~  222 (303)
T 1o6z_A          149 SARFRYVLSEEFDAPVQNVEGT-ILGEHGDAQVPVFSKVSVDGTD--PEFSGD---EKEQLLGDLQESAMDVIERKGATE  222 (303)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEETTBC--CCCCHH---HHHHHHHHHHHHHHHHHTTTSSCC
T ss_pred             HHHHHHHHHHHhCcCHHHeEEE-EEeCCCCccccCCcccccCCcC--ccCCHH---HHHHHHHHHHHHhHHHHhcCCChH
Confidence            9999999999999999999977 8999999999999999999999  666444   458899999999999999999888


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582         243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  320 (329)
                      ++++. + +.+++++|++|+ +++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++.
T Consensus       223 ~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~  298 (303)
T 1o6z_A          223 WGPAR-G-VAHMVEAILHDTGEVLPASVKLEGEFGH-EDTAFGVPVSLGSNGVEEIVE-WDLDDYEQDLMADAAEKLSDQ  298 (303)
T ss_dssp             HHHHH-H-HHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-H-HHHHHHHHHhCCCCEEEEEEecCCccCC-cceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence            85543 3 448999999998 999999999999999 89999999999 999999999 999999999999999999999


Q ss_pred             HHHH
Q psy9582         321 ILSI  324 (329)
Q Consensus       321 ~~~~  324 (329)
                      ++.+
T Consensus       299 ~~~~  302 (303)
T 1o6z_A          299 YDKI  302 (303)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            8864

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=100.00  E-value=3.2e-61  Score=447.22  Aligned_cols=303  Identities=20%  Similarity=0.292  Sum_probs=273.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~   82 (329)
                      +++||+|||| |.+|++++..|+..++.+     +|+|+|++    ++++++.++|+.|.. +.. .+++++++.+++++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~-----ev~l~Di~----~~~~~~~~~dl~~~~-~~~~~~~~i~~~~~~al~   73 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIAD-----EIVLIDAN----ESKAIGDAMDFNHGK-VFAPKPVDIWHGDYDDCR   73 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHHHT-TSSSSCCEEEECCGGGTT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----cchHHHHHhhHHHHh-hhcCCCeEEEcCcHHHhC
Confidence            3579999999 999999999999888876     99999999    668888899999864 332 35666667789999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRL  161 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~l  161 (329)
                      |||+||++++.++++|++|.+++.+|+++++++++.++++| |++|++++|||+|++|+++++++ ++|++|++|. |.|
T Consensus        74 ~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv~~~~~~~~~~s-~~p~~rviG~gt~l  151 (316)
T 1ldn_A           74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVDILTYATWKFS-GLPHERVIGSGTIL  151 (316)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHHH-TCCGGGEEECTTHH
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHHHh-CCCHHHEEecccch
Confidence            99999999999999999999999999999999999999998 99999999999999999999999 9999997666 999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccch---hhhHHHHHhhhhHHHHHhc
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN---KNVFLPAISRRGEEIISIR  238 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~---~~~l~~~v~~~~~~i~~~k  238 (329)
                      |++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|+.+++++...|.   .+++.+++++++++|++.|
T Consensus       152 D~~r~~~~la~~l~v~~~~v~~~-v~G~HG~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k  230 (316)
T 1ldn_A          152 DTARFRFLLGEYFSVAPQNVHAY-IIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKK  230 (316)
T ss_dssp             HHHHHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHeEEE-EecccCCceeeeehhccCCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHhcc
Confidence            99999999999999999999985 8999999999999999999999998875430132   3788889999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      |.++++++.+  +.+++++|++|+ .++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++
T Consensus       231 g~~~~~~a~a--~~~~~~ai~~~~~~~~~~~~~~~g~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~  306 (316)
T 1ldn_A          231 GATYYGIAMG--LARVTRAILHNENAILTVSAYLDGLYGE-RDVYIGVPAVINRNGIREVIE-IELNDDEKNRFHHSAAT  306 (316)
T ss_dssp             SCCCHHHHHH--HHHHHHHHHTTCCEEEEEEEEEESTTSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHH--HHHHHHHHHhCCCcEEEEEEEecCccCC-cceEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHH
Confidence            9988877643  448999999998 999999999999999 89999999999 999999999 99999999999999999


Q ss_pred             HHHHHHHH
Q psy9582         317 LKNEILSI  324 (329)
Q Consensus       317 i~~~~~~~  324 (329)
                      |++.++.+
T Consensus       307 l~~~~~~~  314 (316)
T 1ldn_A          307 LKSVLARA  314 (316)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHHH
Confidence            99998764

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=100.00  E-value=1e-60  Score=441.04  Aligned_cols=294  Identities=19%  Similarity=0.307  Sum_probs=255.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~al~   82 (329)
                      |||+||||+|+||+++++.|..+ ++..     ||+|+|++    + +++|.++|++|..  ....++..  ++.+++++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~-----el~L~Di~----~-~~~G~a~Dl~~~~--~~~~v~~~~~~~~~~~~~   68 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGS-----ELSLYDIA----P-VTPGVAVDLSHIP--TAVKIKGFSGEDATPALE   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTE-----EEEEECSS----T-THHHHHHHHHTSC--SSEEEEEECSSCCHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCc-----eEEEEecC----C-CchhHHHHhhCCC--CCceEEEecCCCcHHHhC
Confidence            58999997799999999999887 6655     99999999    5 5789999999863  32234432  46799999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHH---HHHHCCCC-CCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYI---TMKSAPDL-SYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~---~~~~~~~~-~~~~i~~~  158 (329)
                      |||+||+++|.||+|||+|.|++.+|+++++++++.+.++| |+++++++|||+|++|++   +++++ ++ |++|++|+
T Consensus        69 ~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvvtNPvd~~t~~a~~~~k~s-g~~p~~rv~G~  146 (312)
T 3hhp_A           69 GADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNPVNTTVAIAAEVLKKA-GVYDKNKLFGV  146 (312)
T ss_dssp             TCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHHT-TCCCTTSEEEC
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEecCcchhHHHHHHHHHHHc-CCCCcceEEEE
Confidence            99999999999999999999999999999999999999998 999999999999999999   78888 66 99999999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecC-CCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH-SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h-g~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |.||++|+++++|+++|++|++|+.+ ||||| |+++||+||++  .|.|+.    ++   ..+++.+++++++++|++.
T Consensus       147 ~~LD~~R~~~~la~~lgv~~~~v~~~-V~G~Hsg~t~vp~~S~~--~g~~~~----~~---~~~~i~~~v~~~g~eIi~~  216 (312)
T 3hhp_A          147 TTLDIIRSNTFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV--PGVSFT----EQ---EVADLTKRIQNAGTEVVEA  216 (312)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGCCCC-EEECSSGGGEEECGGGC--TTCCCC----HH---HHHHHHHHHHTHHHHHHHH
T ss_pred             echhHHHHHHHHHHHhCcChhHccee-EEeccCCCceeeecccC--CCCCCC----HH---HHHHHHHHHHhhhHHHHhh
Confidence            99999999999999999999999977 89999 88999999998  676643    22   3478999999999999998


Q ss_pred             c---CCccHHHHHHHHHHHHHHHH---hCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582         238 R---GASSAASAASAAIDHIKDWI---FGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK  308 (329)
Q Consensus       238 k---g~~~~~~~a~~~~~~l~~~i---~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~  308 (329)
                      |   |.+.++.+ .+++ +++++|   ++|+ .++||+ +++|+ |. .|+|||+||++ ++|++++++ + +|+++|++
T Consensus       217 k~g~gst~~s~a-~a~~-~~~~ai~~~l~~~~~v~~~s-~~~g~-g~-~~v~~s~P~~~g~~Gv~~v~~-~~~L~~~E~~  290 (312)
T 3hhp_A          217 KAGGGSATLSMG-QAAA-RFGLSLVRALQGEQGVVECA-YVEGD-GQ-YARFFSQPLLLGKNGVEERKS-IGTLSAFEQN  290 (312)
T ss_dssp             TTTSCCCCHHHH-HHHH-HHHHHHHHHHTTCSSCEEEE-EEECC-CS-SCSEEEEEEEEETTEEEEECC-CCCCCHHHHH
T ss_pred             ccCCCCchhHHH-HHHH-HHHHHHHHHcCCCCceEEEE-EecCC-CC-cceEEEeEEEEeCCEEEEEcC-CCCCCHHHHH
Confidence            7   55555444 3344 676666   6777 999998 78766 43 67899999999 999999999 6 99999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhC
Q psy9582         309 KINLSIEELKNEILSISHLIR  329 (329)
Q Consensus       309 ~l~~s~~~i~~~~~~~~~~~~  329 (329)
                      +|++|+++|++.++.+++|..
T Consensus       291 ~l~~s~~~l~~~i~~g~~~~~  311 (312)
T 3hhp_A          291 ALEGMLDTLKKDIALGEEFVN  311 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999998863

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=100.00  E-value=3.8e-61  Score=445.41  Aligned_cols=298  Identities=20%  Similarity=0.340  Sum_probs=262.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~al~~   83 (329)
                      +||+|||| |++|++++..|+..+++      +|+|+|++    ++++++.++|+.+....  ...+++.+++ +++++|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~------~v~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~   70 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELG------DIVLLDIV----EGVPQGKALDLYEASPIEGFDVRVTGTNN-YADTAN   70 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSS----SSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCC------eEEEEeCC----ccHHHHHHHhHHHhHhhcCCCeEEEECCC-HHHHCC
Confidence            58999999 99999999999998865      69999999    77888889999886422  2245666667 499999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|+++|++|.+++.+|+++++++++.++++| |++|++++|||+|++|+++++++ ++|++|++|+ |.||
T Consensus        71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv~~~t~~~~~~~-~~~~~rviG~gt~LD  148 (309)
T 1ur5_A           71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDAMTYLAAEVS-GFPKERVIGQAGVLD  148 (309)
T ss_dssp             CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEEECCHHHH
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCchHHHHHHHHHHc-CCCHHHEEECCcchH
Confidence            9999999999999999999999999999999999999998 99999999999999999999997 9999998777 9999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHH--hcCC
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIIS--IRGA  240 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~--~kg~  240 (329)
                      ++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|.|+.+++.++   ..+++.+++++++++|++  .||.
T Consensus       149 ~~r~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p~~s~~~v~g~~~~~~~~~~---~~~~~~~~v~~~g~eii~~~~kgs  224 (309)
T 1ur5_A          149 AARYRTFIAMEAGVSVEDVQAM-LMGGHGDEMVPLPRFSCISGIPVSEFIAPD---RLAQIVERTRKGGGEIVNLLKTGS  224 (309)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEC-CEECSGGGEECCGGGEEETTEEGGGTSCHH---HHHHHHHHHHTHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHhCCChhheeEE-EecCcCCceeeeeecceeCCEeHHHHcCHh---HHHHHHHHHHhhhHHhhhhccCCC
Confidence            9999999999999999999986 899999999999999999999999887554   457899999999999999  7887


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      +.++++. + +.+++++|++|+ +++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|+
T Consensus       225 ~~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~  300 (309)
T 1ur5_A          225 AYYAPAA-A-TAQMVEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILE-LPLNEEEMALLNASAKAVR  300 (309)
T ss_dssp             CCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHH-H-HHHHHHHHHcCCCcEEEEEEEecCccCC-cceEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHHHHH
Confidence            6665544 3 348999999998 999999999999999 89999999999 999999999 9999999999999999999


Q ss_pred             HHHHHHH
Q psy9582         319 NEILSIS  325 (329)
Q Consensus       319 ~~~~~~~  325 (329)
                      +.++.+.
T Consensus       301 ~~~~~~~  307 (309)
T 1ur5_A          301 ATLDTLK  307 (309)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHh
Confidence            9998765

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=100.00  E-value=2.5e-62  Score=452.91  Aligned_cols=287  Identities=14%  Similarity=0.183  Sum_probs=260.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~~~i~~~~~~~~al~~   83 (329)
                      .+||+|||| |.||+++++.|+..++++     +|+|+|++    ++++++.++|++|.. .....++..+++ +++++|
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~-----ev~L~Di~----~~~~~g~a~DL~~~~~~~~~~~i~~t~d-~~~~~d   89 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLAD-----EVALVDVM----EDKLKGEMMDLEHGSLFLHTAKIVSGKD-YSVSAG   89 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCS-----EEEEECSC----HHHHHHHHHHHHHHGGGSCCSEEEEESS-SCSCSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCC-----eEEEEECC----HHHHHHHHHHhhhhhhcccCCeEEEcCC-HHHhCC
Confidence            479999999 999999999999999987     99999999    788999999999974 222346666666 678999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~ld  162 (329)
                      ||+||+++|.|++|||+|.+++.+|+++++++++++.++| |+++++++|||+|++|+++++++ ++|++|++| +|.||
T Consensus        90 aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvvtNPvdi~t~~~~k~s-g~p~~rViG~gt~LD  167 (330)
T 3ldh_A           90 SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELHPELGTDKNKQDWKLS-GLPMHRIIGSGCNLD  167 (330)
T ss_dssp             CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHH-CCCGGGEECCTTHHH
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeCCCccHHHHHHHHHHh-CCCHHHeecccCchh
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 999999655 58999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS  242 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~  242 (329)
                      ++|+++++|+++|++|++|+++ |||+||++++|+||+         +       | .+++.+++++++++|++.||+++
T Consensus       168 s~R~~~~lA~~lgv~~~~V~~~-V~G~Hg~t~vp~~S~---------~-------~-~~~~~~~v~~~g~eii~~kg~t~  229 (330)
T 3ldh_A          168 SARFRYLMGERLGVHSCLVIGW-VIGQHGDSVPSVWSG---------M-------W-DAKLHKDVVDSAYEVIKLKGYTS  229 (330)
T ss_dssp             HHHHHHHHHHHHTSCTTTCCEE-ECSSSSTTCCEEEEE---------E-------E-ETTEEHHHHHCCCTTSTTCHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHeEEE-EEcCCCCceeeechh---------h-------H-HHHHHHHHHHHHHHHHHccCCcc
Confidence            9999999999999999999987 899999999999999         1       1 14677889999999999999888


Q ss_pred             HHHHH---------------HHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEE--eccCCCCCH
Q psy9582         243 AASAA---------------SAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYK--IIQNLEIDK  304 (329)
Q Consensus       243 ~~~~a---------------~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~--~~~~~~l~~  304 (329)
                      |++++               .+++.++++++++|+ .++|||++++|+||+++|+|||+||++.+|+++  +++ ++|++
T Consensus       230 ~a~a~~~~~~~~~~~~~~~~~~a~~~~~~ail~~~~~v~~~s~~~~g~yg~~~~v~~s~P~~lg~Gv~~~~iv~-~~L~~  308 (330)
T 3ldh_A          230 WAIGLVVSNPVDVLTYVAWKGCSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNVFLSLPCVLNNGISHCNIVK-MKLKP  308 (330)
T ss_dssp             HHHHHTTHHHHTTSSSCSCTHHHHHHHHHHHHHTCCEEECCBCCCSSSSSCCSCCCCBCCEEEBTTBCTTCCCC-CCCCH
T ss_pred             eeeeeeccCccchhhhhhhHHHHHHHHHHHHHcCCCceEEEEeecCCccCCCCceEEEEEEEECCcEEEcceec-CCCCH
Confidence            87765               113458999999998 999999999999999889999999999999999  999 99999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q psy9582         305 FSRKKINLSIEELKNEILS  323 (329)
Q Consensus       305 ~E~~~l~~s~~~i~~~~~~  323 (329)
                      +|+++|++|+++|++.++.
T Consensus       309 ~E~~~l~~s~~~l~~~~~~  327 (330)
T 3ldh_A          309 DEEQQLQKSATTLWDIQKD  327 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998875

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=100.00  E-value=8.1e-60  Score=437.36  Aligned_cols=299  Identities=23%  Similarity=0.409  Sum_probs=264.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec--CCcccccchhhhHhhhhhcccCCc-cceEe--ec-Cccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA--SNKKSQKAIKGVIMEIEDCIFPLL-VDVSV--HE-NPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~--~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~--~~-~~~~   79 (329)
                      +||+||||+|++|++++..|+..++..     |++|+|+  +    ++++++.++|+.|.. ++. .++.+  ++ ++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~-----el~L~Di~~~----~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d~l~~   70 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMK-----DLVLIGREHS----INKLEGLREDIYDAL-AGTRSDANIYVESDENLR   70 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCC-----EEEEEECGGG----HHHHHHHHHHHHHHH-TTSCCCCEEEEEETTCGG
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCC-----EEEEEcCCCc----hhhhHHHHHHHHHhH-HhcCCCeEEEeCCcchHH
Confidence            589999999999999999999888765     8999999  6    667888999999865 333 23344  33 2689


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-  158 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-  158 (329)
                      +++|||+||+++|.++++|++|.+++.+|+++++++++.++++|  ++|++++|||+|++|+++++++ ++|++|++|. 
T Consensus        71 al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~~-~~p~~rviG~g  147 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVDS-KFERNQVFGLG  147 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHHHHHHHHH-CCCTTSEEECT
T ss_pred             HhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHHHHHHHhh-CcChhcEEEeC
Confidence            99999999999999999999999999999999999999999996  9999999999999999999997 8999998776 


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhh--ccCccchhhhHHHHHhhhhHHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMI--NNNSFWNKNVFLPAISRRGEEIIS  236 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~--~~~~~~~~~~l~~~v~~~~~~i~~  236 (329)
                      |.||++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|.|+.+++  .++   ..+++.+++++++++|++
T Consensus       148 t~LD~~r~~~~la~~lgv~~~~v~~~-v~G~Hg~~~~p~~s~~~v~g~~~~~~~~~~~~---~~~~~~~~v~~~g~eii~  223 (313)
T 1hye_A          148 THLDSLRFKVAIAKFFGVHIDEVRTR-IIGEHGDSMVPLLSATSIGGIPIQKFERFKEL---PIDEIIEDVKTKGEQIIR  223 (313)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEETTEEGGGCGGGGGC---CHHHHHHHHHHHTTSCCC
T ss_pred             ccHHHHHHHHHHHHHhCcCHHHeEEE-EeeccCCcccceeeccccCCEEHHHHhcCCHH---HHHHHHHHHHhccceeec
Confidence            99999999999999999999999987 899999999999999999999999874  444   458999999999999999


Q ss_pred             hcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         237 IRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       237 ~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      .||.+.++++. + +.+++++|++|+ .++|++++++|+| |+ +|+|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus       224 ~kgs~~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g~~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s  299 (313)
T 1hye_A          224 LKGGSEFGPAA-A-ILNVVRCIVNNEKRLLTLSAYVDGEFDGI-RDVCIGVPVKIGRDGIEEVVS-IELDKDEIIAFRKS  299 (313)
T ss_dssp             ------CCHHH-H-HHHHHHHHHTTCCEEEEEEEEEESSSSSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHH
T ss_pred             CCCCcHHHHHH-H-HHHHHHHHHcCCCeEEEEEEeecceecCc-cceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHH
Confidence            99966554443 3 348999999998 9999999999999 99 89999999999 999999999 99999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         314 IEELKNEILSIS  325 (329)
Q Consensus       314 ~~~i~~~~~~~~  325 (329)
                      +++|++.++.+.
T Consensus       300 ~~~l~~~~~~~~  311 (313)
T 1hye_A          300 AEIIKKYCEEVK  311 (313)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999998775

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=100.00  E-value=4.8e-59  Score=433.15  Aligned_cols=305  Identities=21%  Similarity=0.289  Sum_probs=270.9

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~   79 (329)
                      |+..+||+|||| |++|++++..|+..+++      +|+|+|++    ++++++.+.|+.+....  ...+++.+++. +
T Consensus         1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~   68 (322)
T 1t2d_A            1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D   68 (322)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence            445679999999 99999999999999875      69999999    78888888999875321  23467777775 9


Q ss_pred             ccCCccEEEEeCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc
Q psy9582          80 AFKDANIAILIGSFPRKSNME-----RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN  154 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~-----~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~  154 (329)
                      +++|||+||+++|.|+++|++     |.+++.+|++++++++++|+++| |++|+|++|||++++|+++++.+ ++|++|
T Consensus        69 al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~t~~~~~~~-g~~~~r  146 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVMVQLLHQHS-GVPKNK  146 (322)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHHH-CCCGGG
T ss_pred             HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHHHHHHHHhc-CCChHH
Confidence            999999999999999999999     99999999999999999999998 99999999999999999999987 899999


Q ss_pred             EEEe-chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhh
Q psy9582         155 FTAM-LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRG  231 (329)
Q Consensus       155 i~~~-t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~  231 (329)
                      ++|+ |.||++|+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|+.+++++.  +....+++.+++++++
T Consensus       147 viG~gt~ld~~R~~~~la~~lgv~~~~v~~~-v~G~HG~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g  225 (322)
T 1t2d_A          147 IIGLGGVLDTSRLKYYISQKLNVCPRDVNAH-IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTA  225 (322)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHH
T ss_pred             EEeccCcccHHHHHHHHHHHhCCCHHHeEEE-EEcCCCCcEEeeHHHceECcEeHHHhccccCCCHHHHHHHHHHHHHHH
Confidence            8776 89999999999999999999999988 899999999999999999999999886432  0112467888999999


Q ss_pred             HHHHHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHH
Q psy9582         232 EEIISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKK  309 (329)
Q Consensus       232 ~~i~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~  309 (329)
                      ++|++.||.+.++++.+  +.+++++|++|+ ++++++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++
T Consensus       226 ~eii~~kgs~~~~~a~a--~~~~~~ai~~~~~~v~~~s~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~  301 (322)
T 1t2d_A          226 LEIVNLHASPYVAPAAA--IIEMAESYLKDLKKVLICSTLLEGQYGH-SDIFGGTPVVLGANGVEQVIE-LQLNSEEKAK  301 (322)
T ss_dssp             HHHHHHTSSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHH
T ss_pred             HHHHhccCchHHHHHHH--HHHHHHHHHhCCCCEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEeCC-CCCCHHHHHH
Confidence            99999999777655543  348999999998 999999999999999 89999999999 999999999 9999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy9582         310 INLSIEELKNEILSIS  325 (329)
Q Consensus       310 l~~s~~~i~~~~~~~~  325 (329)
                      |++|++.|++.++.+-
T Consensus       302 l~~s~~~L~~~~~~~~  317 (322)
T 1t2d_A          302 FDEAIAETKRMKALAH  317 (322)
T ss_dssp             HHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=100.00  E-value=2.9e-58  Score=429.61  Aligned_cols=304  Identities=21%  Similarity=0.318  Sum_probs=270.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~al   81 (329)
                      +++||+|||| |++|++++..|+..+++      +|+|+|++    ++++++.+.|+.+....  ...+++.+++..+++
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~------~V~L~D~~----~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~   76 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELA------DVVLYDVV----KGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAAL   76 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCC------EEEEECSS----SSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC------eEEEEECC----hhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHh
Confidence            4589999999 99999999999998874      79999999    77888878888875421  234677788876699


Q ss_pred             CCccEEEEeCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEE
Q psy9582          82 KDANIAILIGSFPRKSNM-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFT  156 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~  156 (329)
                      ++||+||+++|.|+++|+     +|.+++.+|++++++++++|.++| |++++|++|||++++|+++++.+ ++|++|++
T Consensus        77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~t~~~~~~~-~~~~~rvi  154 (331)
T 1pzg_A           77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCMVKVMCEAS-GVPTNMIC  154 (331)
T ss_dssp             TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEE
T ss_pred             CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHHHHHHHHhc-CCChhcEE
Confidence            999999999999999999     999999999999999999999998 99999999999999999999998 99999987


Q ss_pred             Ee-chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHH
Q psy9582         157 AM-LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEE  233 (329)
Q Consensus       157 ~~-t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~  233 (329)
                      |+ |.||++|+++++|+++|++|++|+.+ |||+||+++||+||+++++|.|+.+++.+.  +....+++.+++++++++
T Consensus       155 G~gt~LD~~R~~~~la~~lgv~~~~v~~~-v~G~Hg~~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~e  233 (331)
T 1pzg_A          155 GMACMLDSGRFRRYVADALSVSPRDVQAT-VIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGE  233 (331)
T ss_dssp             ECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred             eccchHHHHHHHHHHHHHhCCCHHHceEE-EecCCCCCEeeeeecceECCEEHHHHhhcccCCHHHHHHHHHHHHhccHH
Confidence            76 89999999999999999999999987 899999999999999999999999886431  011246677788999999


Q ss_pred             HHH--hcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHH
Q psy9582         234 IIS--IRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKK  309 (329)
Q Consensus       234 i~~--~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~  309 (329)
                      |++  .||.+.|+.+. + +..++++|++|+ ++++++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++
T Consensus       234 ii~~~~kgst~~~~a~-a-~~~ii~ai~~~~~~~~~~~v~~~G~~g~-~~~~~~vP~~vg~~Gv~~i~~-~~L~~~e~~~  309 (331)
T 1pzg_A          234 IVRFLGQGSAYYAPAA-S-AVAMATSFLNDEKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGIERVIE-LELNEEEKKQ  309 (331)
T ss_dssp             HHHHHSSSCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHH
T ss_pred             HHHhhcCCCccchHHH-H-HHHHHHHHHhCCCcEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEecC-CCCCHHHHHH
Confidence            999  68876665543 3 448999999998 999999999999999 89999999999 999999998 9999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy9582         310 INLSIEELKNEILSIS  325 (329)
Q Consensus       310 l~~s~~~i~~~~~~~~  325 (329)
                      |++|+++|++.++.+.
T Consensus       310 l~~s~~~l~~~~~~~~  325 (331)
T 1pzg_A          310 FQKSVDDVMALNKAVA  325 (331)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=100.00  E-value=7.9e-58  Score=426.18  Aligned_cols=301  Identities=23%  Similarity=0.361  Sum_probs=268.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~al~~   83 (329)
                      +||+|||| |++|+++|..|+..+++      +|+|+|++    ++++++.++|+.+....  ...+++.+++. +++++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~------~V~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~   82 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLG------DVYMFDII----EGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN   82 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC------EEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC------eEEEEECC----HHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence            69999999 99999999999998875      79999999    77888888888875421  23467777775 99999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||+++|.|+++|++|.+++.+|+++++++++++.++| |++++|++|||++++|+++++.+ ++||+|++|+ |.||
T Consensus        83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~t~~~~~~~-~~~~~rviG~~t~Ld  160 (328)
T 2hjr_A           83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAMVYYFKEKS-GIPANKVCGMSGVLD  160 (328)
T ss_dssp             CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGGGEEESCHHHH
T ss_pred             CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHhc-CCChhhEEEeCcHHH
Confidence            9999999999999999999999999999999999999998 99999999999999999999987 8999998877 6999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHH--hc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIIS--IR  238 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~--~k  238 (329)
                      ++|+++++|+++|++|++|+.+ |||+||++++|+||+++++|+|+.+++++.  +....+++.++++++++++++  .+
T Consensus       161 ~~R~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~~~  239 (328)
T 2hjr_A          161 SARFRCNLSRALGVKPSDVSAI-VVGGHGDEMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELLKT  239 (328)
T ss_dssp             HHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHhCCCHHHeeEE-EecCCCCceeeeeeeceECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhhCC
Confidence            9999999999999999999987 899999999999999999999999886431  011236788888999999999  57


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      |.+.|+++. + +.+++++|++|+ ++++++++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus       240 gs~~~~~a~-a-~~~i~~ai~~~~~~v~~~~v~~~G~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~  315 (328)
T 2hjr_A          240 GSAFYAPAA-S-AVAMAQAYLKDSKSVLVCSTYLTGQYNV-NNLFVGVPVVIGKNGIEDVVI-VNLSDDEKSLFSKSVES  315 (328)
T ss_dssp             CCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             CchHHHHHH-H-HHHHHHHHHcCCCcEEEEEEeecCccCC-CceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHH
Confidence            776665543 2 448999999998 999999999999999 89999999999 999999998 99999999999999999


Q ss_pred             HHHHHHHHH
Q psy9582         317 LKNEILSIS  325 (329)
Q Consensus       317 i~~~~~~~~  325 (329)
                      |++.++.+.
T Consensus       316 l~~~~~~~~  324 (328)
T 2hjr_A          316 IQNLVQDLK  324 (328)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998875

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=100.00  E-value=1.1e-57  Score=419.97  Aligned_cols=284  Identities=18%  Similarity=0.270  Sum_probs=247.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||| |++|+++++.|+..++++     +|+|+|++    ++ +.+.++|+.+...   .+++.+++ +++++||
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~-----ev~L~Di~----~~-~~g~a~dl~~~~~---~~i~~t~d-~~~l~~a   78 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIAD-----RLVLLDLS----EG-TKGATMDLEIFNL---PNVEISKD-LSASAHS   78 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECCC----------CHHHHHHHTC---TTEEEESC-GGGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEcCC----cc-hHHHHHHHhhhcC---CCeEEeCC-HHHHCCC
Confidence            479999998 999999999999998876     99999999    55 6778889987532   26777777 5999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDH  163 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds  163 (329)
                      |+||+++|.+ +||++|.+++.+|++++++++++++++| |++|+|++|||+|++|+++++++ ++|++|++|+ |.||+
T Consensus        79 D~Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~-~~p~~rviG~gt~Ld~  155 (303)
T 2i6t_A           79 KVVIFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLS-TFPANRVIGIGCNLDS  155 (303)
T ss_dssp             SEEEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTTHHHH
T ss_pred             CEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhc-CCCHHHeeCCCCCchH
Confidence            9999999996 7999999999999999999999999998 99999999999999999999997 9999998887 99999


Q ss_pred             HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccH
Q psy9582         164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSA  243 (329)
Q Consensus       164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~  243 (329)
                      +|+++++|+++|++|++|+.+ |||+||++++|+||+..       +       |..+++.+++++++++|++.||.+.|
T Consensus       156 ~R~~~~la~~lgv~~~~v~~~-v~G~Hg~s~~p~~s~~~-------~-------~~~~~~~~~~~~~g~eii~~kGst~~  220 (303)
T 2i6t_A          156 QRLQYIITNVLKAQTSGKEVW-VIGEQGEDKVLTWSGQE-------E-------VVSHTSQVQLSNRAMELLRVKGQRSW  220 (303)
T ss_dssp             HHHHHHHHHTSCCTTGGGGEE-EEBSCSSSCEEEEBCSS-------C-------CCCHHHHHHHHHHHHTTSSSCCCCHH
T ss_pred             HHHHHHHHHHcCCChHHeEEE-EecCCCCCccccccccc-------c-------ccHHHHHHHHHHHHHHHHHccCchHH
Confidence            999999999999999999977 89999999999999952       1       23467888899999999999997666


Q ss_pred             HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHHHHHHHHHHHHHH
Q psy9582         244 ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRKKINLSIEELKNE  320 (329)
Q Consensus       244 ~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~~l~~s~~~i~~~  320 (329)
                      +++. + +.+++++|++|+ .+++++++++|+||+|+|+|||+||++ ++|++++++ + +|+++|+++|++|++.|++.
T Consensus       221 ~~a~-a-~~~i~~ai~~~~~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~-~~~l~~~e~~~l~~s~~~l~~~  297 (303)
T 2i6t_A          221 SVGL-S-VADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIK-TTLKEDTVTEKLQSSASSIHSL  297 (303)
T ss_dssp             HHHH-H-HHHHHHHHHTTCCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECC-BCC-CCHHHHHHHHHHHHHHHH
T ss_pred             hHHH-H-HHHHHHHHHcCCCcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            5544 3 348999999998 999999999999999999999999999 999999998 6 89999999999999999999


Q ss_pred             HHHH
Q psy9582         321 ILSI  324 (329)
Q Consensus       321 ~~~~  324 (329)
                      ++.+
T Consensus       298 ~~~~  301 (303)
T 2i6t_A          298 QQQL  301 (303)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            8754

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=100.00  E-value=1.7e-57  Score=420.12  Aligned_cols=295  Identities=19%  Similarity=0.260  Sum_probs=237.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||| |++|++++..|+..++++     +|+|+|++    ++++++.++|+.+.. ++....+++.+.++++++||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~-----eV~L~D~~----~~~~~~~~~~l~~~~-~~~~~~~i~~~~~~a~~~aD   69 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCS-----ELVLVDRD----EDRAQAEAEDIAHAA-PVSHGTRVWHGGHSELADAQ   69 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS----HHHHHHHHHHHTTSC-CTTSCCEEEEECGGGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----HHHHHHHHHhhhhhh-hhcCCeEEEECCHHHhCCCC
Confidence            58999999 999999999999998876     99999999    777888889998865 33334444433478999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHHH
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDHN  164 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~  164 (329)
                      +||++++.|+++|++|.+++.+|+++++++++++.+++ |+++++++|||++++++++++.+   |++|++|+ |.||+.
T Consensus        70 vVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~---~~~rviG~gt~Ld~~  145 (304)
T 2v6b_A           70 VVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA---PGQPVIGSGTVLDSA  145 (304)
T ss_dssp             EEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS---CSSCEEECTTHHHHH
T ss_pred             EEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC---ChhcEEeCCcCchHH
Confidence            99999999999999999999999999999999999997 99999999999999999999987   67887655 999999


Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc-cc---hhhhHHHHHhhhhHHHHHhcCC
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS-FW---NKNVFLPAISRRGEEIISIRGA  240 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~-~~---~~~~l~~~v~~~~~~i~~~kg~  240 (329)
                      |+++++|+++|++|++|+.+ ||||||++++|+||+++++|+|+.+++++.. .|   ..+++.+++++++++|++.||.
T Consensus       146 r~~~~la~~l~v~~~~v~~~-v~G~Hg~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~~kg~  224 (304)
T 2v6b_A          146 RFRHLMAQHAGVDGTHAHGY-VLGEHGDSEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIEGKRA  224 (304)
T ss_dssp             HHHHHHHHHHTSCGGGEECC-EEESSSTTEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC-----------
T ss_pred             HHHHHHHHHhCcCHHHceEE-EecCCCCceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999985 8999999999999999999999998864320 13   4578999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      ++++++. + +.+++++|++|+ +++|++++++| ||    +|||+||++ ++|++++++ ++|+++|+++|++|+++|+
T Consensus       225 t~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g-yg----~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~  296 (304)
T 2v6b_A          225 TYYGIGA-A-LARITEAVLRDRRAVLTVSAPTPE-YG----VSLSLPRVVGRQGVLSTLH-PKLTGDEQQKLEQSAGVLR  296 (304)
T ss_dssp             CCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEETT-TT----EEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHH-H-HHHHHHHHHhCCCcEEEEEEEECC-cC----cEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence            8887754 3 448999999998 99999999999 96    899999999 999999999 9999999999999999999


Q ss_pred             HHHHHH
Q psy9582         319 NEILSI  324 (329)
Q Consensus       319 ~~~~~~  324 (329)
                      +.++.+
T Consensus       297 ~~~~~~  302 (304)
T 2v6b_A          297 GFKQQL  302 (304)
T ss_dssp             C-----
T ss_pred             HHHHHh
Confidence            998765

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=100.00  E-value=3.6e-57  Score=419.16  Aligned_cols=301  Identities=22%  Similarity=0.360  Sum_probs=266.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~~al~~   83 (329)
                      |||+|||| |.+|++++..|+..++..     +|+|+|++    ++++++..+|+.+....  ...+++.+++. +++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~-----~V~l~D~~----~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~~l~~   69 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLAR-----ELVLLDVV----EGIPQGKALDMYESGPVGLFDTKVTGSNDY-ADTAN   69 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS----SSHHHHHHHHHHTTHHHHTCCCEEEEESCG-GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----hhHHHHHHHhHHhhhhcccCCcEEEECCCH-HHHCC
Confidence            58999999 999999999999875433     99999999    67788887788765311  12356666765 56999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  162 (329)
                      ||+||++.+.|+++|++|.+++.+|+++++++++.+++++ |+++++++|||++.+++++++++ ++|++|++|+ |.||
T Consensus        70 aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~~~~~~~~~~~-~~~~~rviG~gt~ld  147 (310)
T 1guz_A           70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLDIMTHVAWVRS-GLPKERVIGMAGVLD  147 (310)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHHHHHHHHHHHH-CSCGGGEEEECHHHH
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchHHHHHHHHHhc-CCChHHEEECCCchH
Confidence            9999999999999999999999999999999999999997 99999999999999999999997 9999997666 9999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHH--hcCC
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIIS--IRGA  240 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~--~kg~  240 (329)
                      ++|+++++|+++|++|++|+.+ |||+||++++|+||+++++|+|+.+++.++   ..+++.+++++++++|++  .||.
T Consensus       148 ~~r~~~~la~~l~v~~~~v~~~-v~G~Hg~~~~p~~s~~~v~g~~~~~~~~~~---~~~~~~~~v~~~g~~ii~~~~kgs  223 (310)
T 1guz_A          148 AARFRSFIAMELGVSMQDINAC-VLGGHGDAMVPVVKYTTVAGIPISDLLPAE---TIDKLVERTRNGGAEIVEHLKQGS  223 (310)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECGGGCEETTEEHHHHSCHH---HHHHHHHHHHTHHHHHHHHHSSSC
T ss_pred             HHHHHHHHHHHhCCCHHHeEEE-EEcccCCcEeeeeecccCCCEEHHHHCCHH---HHHHHHHHHHHhHHHHHhhcCCCC
Confidence            9999999999999999999986 899999999999999999999999987654   457899999999999999  7887


Q ss_pred             ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      +.++++. + +.+++++|++|+ +++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|+
T Consensus       224 ~~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~  299 (310)
T 1guz_A          224 AFYAPAS-S-VVEMVESIVLDRKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYE-INLDQADLDLLQKSAKIVD  299 (310)
T ss_dssp             CCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHH-H-HHHHHHHHHcCCCcEEEEEEeecCccCC-cceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence            6665544 3 348999999998 999999999999999 89999999999 999999999 9999999999999999999


Q ss_pred             HHHHHHHhh
Q psy9582         319 NEILSISHL  327 (329)
Q Consensus       319 ~~~~~~~~~  327 (329)
                      +.++.+...
T Consensus       300 ~~~~~~~~~  308 (310)
T 1guz_A          300 ENCKMLEST  308 (310)
T ss_dssp             HHHHTC---
T ss_pred             HHHHHHhhh
Confidence            999876543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=100.00  E-value=3.7e-56  Score=412.54  Aligned_cols=293  Identities=21%  Similarity=0.269  Sum_probs=252.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee---cCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH---ENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~---~~~~~al~   82 (329)
                      |||+||||+|++|++++..|+..++..     +|+|+|++    +  .++.++|+.|...+  .+++.+   ++..++++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~-----ev~L~Di~----~--~~~~a~dL~~~~~~--~~l~~~~~t~d~~~a~~   67 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVS-----RLTLYDIA----H--TPGVAADLSHIETR--ATVKGYLGPEQLPDCLK   67 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCS-----EEEEEESS----S--HHHHHHHHTTSSSS--CEEEEEESGGGHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCc-----EEEEEeCC----c--cHHHHHHHhccCcC--ceEEEecCCCCHHHHhC
Confidence            589999988999999999999888755     99999999    4  57788999986533  245553   45556899


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH----HHHHHCCCCCCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY----ITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~  158 (329)
                      |||+||+++|.|+++|++|.+++.+|+++++++++.|++++ |++|++++|||+|++++    ++++.+ ++|++|++|.
T Consensus        68 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~~~~~~~~~-~~p~~rvig~  145 (314)
T 1mld_A           68 GCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNSTIPITAEVFKKHG-VYNPNKIFGV  145 (314)
T ss_dssp             TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHHTT-CCCTTSEEEC
T ss_pred             CCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcchhHHHHHHHHHHcC-CCCcceEEEe
Confidence            99999999999999999999999999999999999999998 99999999999999985    444545 8999999888


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecC-CCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH-SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h-g~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      |.||+.|+++++|+++|++|++|+.+ ||||| |++++|+||++++    ..+ +.++   ..+++.+++++++++|++.
T Consensus       146 t~Ld~~r~~~~la~~l~v~~~~v~~~-v~G~H~G~~~~p~~s~~~~----~~~-~~~~---~~~~~~~~v~~~g~eii~~  216 (314)
T 1mld_A          146 TTLDIVRANAFVAELKGLDPARVSVP-VIGGHAGKTIIPLISQCTP----KVD-FPQD---QLSTLTGRIQEAGTEVVKA  216 (314)
T ss_dssp             CHHHHHHHHHHHHHHTTCCGGGCBCC-EEECSSGGGEEECGGGCBS----CCC-CCHH---HHHHHHHHHHHHHHHHHHH
T ss_pred             ecccHHHHHHHHHHHhCcChHhEEEE-EccCCCCCcEeeecccCCC----ccc-CCHH---HHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999977 89999 7999999999983    323 2232   3478999999999999996


Q ss_pred             c---CCccHHHHHHHHHHHHHHHHhCC---C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582         238 R---GASSAASAASAAIDHIKDWIFGT---E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK  308 (329)
Q Consensus       238 k---g~~~~~~~a~~~~~~l~~~i~~~---~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~  308 (329)
                      |   |.+.++++. ++ .+++++|++|   + .++++ ++++|+|  |+|+|||+||++ ++|++++++ + +|+++|++
T Consensus       217 k~~~g~t~~~~a~-a~-~~~~~ai~~~~~g~~~v~~~-~~~~g~y--~~~~~~~~P~~ig~~Gv~~i~~-l~~l~~~e~~  290 (314)
T 1mld_A          217 KAGAGSATLSMAY-AG-ARFVFSLVDAMNGKEGVVEC-SFVKSQE--TDCPYFSTPLLLGKKGIEKNLG-IGKISPFEEK  290 (314)
T ss_dssp             HTTSCSCCHHHHH-HH-HHHHHHHHHHHHTCTTCEEE-EEEECCS--SSSSEEEEEEEEETTEEEEECC-CCSCCHHHHH
T ss_pred             hcCCCCcchhHHH-HH-HHHHHHHHcCcCCCcceEEE-EEeCCcc--CCceEEEEEEEEeCCeeEEecC-CCCCCHHHHH
Confidence            6   544554443 33 4788888876   4 68998 7999999  689999999999 999999988 7 99999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhh
Q psy9582         309 KINLSIEELKNEILSISHLI  328 (329)
Q Consensus       309 ~l~~s~~~i~~~~~~~~~~~  328 (329)
                      +|++|+++|++.++.+.+|.
T Consensus       291 ~l~~s~~~l~~~~~~~~~~~  310 (314)
T 1mld_A          291 MIAEAIPELKASIKKGEEFV  310 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998875

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=7.2e-55  Score=405.23  Aligned_cols=299  Identities=24%  Similarity=0.347  Sum_probs=266.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~   83 (329)
                      +||+|||| |.+|++++..|+..++.+     +|+|+|++    ++++++...++.+.. ++.  ..+.. ++ ++++++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~-----~V~l~D~~----~~~~~~~~~~l~~~~-~~~~~~~i~~-~d-~~~~~~   67 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAR-----EMVLIDVD----KKRAEGDALDLIHGT-PFTRRANIYA-GD-YADLKG   67 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHHHG-GGSCCCEEEE-CC-GGGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----eEEEEeCC----hHHHHHHHHHHHhhh-hhcCCcEEEe-CC-HHHhCC
Confidence            58999999 999999999999988765     89999999    677777777777653 222  23433 34 789999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echhH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRLD  162 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~ld  162 (329)
                      ||+||++.+.+++++++|.+++.+|+++++++++.|.+++ |+++++++|||++++++++++.+ ++|++|++| +|.||
T Consensus        68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~~~~~~~~~-~~~~~rviG~~t~ld  145 (319)
T 1a5z_A           68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVLTYFFLKES-GMDPRKVFGSGTVLD  145 (319)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHH-TCCTTTEEECTTHHH
T ss_pred             CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHHHHHHHHHh-CCChhhEEeeCccHH
Confidence            9999999999999999999999999999999999999997 99999999999999999999998 899999755 58999


Q ss_pred             HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCcc-c---hhhhHHHHHhhhhHHHHHhc
Q psy9582         163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSF-W---NKNVFLPAISRRGEEIISIR  238 (329)
Q Consensus       163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~-~---~~~~l~~~v~~~~~~i~~~k  238 (329)
                      ++|+++++|+++|++|++|+.+ |||+||++++|+||+++++|+|+.+++++. . |   ..+++.+.++++++++++.|
T Consensus       146 ~~r~~~~la~~lgv~~~~v~~~-v~G~hg~~~~p~~s~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~v~~~g~eii~~k  223 (319)
T 1a5z_A          146 TARLRTLIAQHCGFSPRSVHVY-VIGEHGDSEVPVWSGAMIGGIPLQNMCQVC-QKCDSKILENFAEKTKRAAYEIIERK  223 (319)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHTTS-SSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCHHHceEE-EEeCCCCCcccchhhceECCEEHHHHhhcc-cccCHHHHHHHHHHHHHhhhhhhccC
Confidence            9999999999999999999987 899999999999999999999999987543 2 3   34678888999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE  316 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  316 (329)
                      |.++++++. + +..++++|++|+ .++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus       224 g~~~~~~a~-a-~~~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~vP~~vg~~Gv~~i~~-~~L~~~e~~~l~~s~~~  299 (319)
T 1a5z_A          224 GATHYAIAL-A-VADIVESIFFDEKRVLTLSVYLEDYLGV-KDLCISVPVTLGKHGVERILE-LNLNEEELEAFRKSASI  299 (319)
T ss_dssp             SCCCHHHHH-H-HHHHHHHHHTTCCEEEEEEEEESSBTTB-CSEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             CchHHHHHH-H-HHHHHHHHHhCCCCEEEEEEEecCccCc-cceEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHH
Confidence            998887754 3 448999999998 999999999999999 89999999999 999999999 99999999999999999


Q ss_pred             HHHHHHHHH
Q psy9582         317 LKNEILSIS  325 (329)
Q Consensus       317 i~~~~~~~~  325 (329)
                      |++.++.+.
T Consensus       300 l~~~~~~~~  308 (319)
T 1a5z_A          300 LKNAINEIT  308 (319)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999998764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=100.00  E-value=1.8e-54  Score=404.16  Aligned_cols=321  Identities=51%  Similarity=0.885  Sum_probs=282.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+|+||+|++|++++..|+..++++.+++.+|+++|+++  ..+++++.++|+.|...++..++..+.+.++++
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~--~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~   78 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ--AMKALEGVVMELEDCAFPLLAGLEATDDPKVAF   78 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG--GHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC--chhhccchhhhhhcccccccCCeEeccChHHHh
Confidence            677789999999999999999999998876433344899999971  124566778899875434445677777888999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      +++|+||++||.+++++++|.+++..|+.+++++++.++++++|+++++++|||++.++++.++.+++++|+++.++|.+
T Consensus        79 ~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl  158 (327)
T 1y7t_A           79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRL  158 (327)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH
T ss_pred             CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchH
Confidence            99999999999999999999999999999999999999998448999999999999999988887657888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS  241 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~  241 (329)
                      |+.|+.+.+++++|+++..++...|||+|+++++|+|+++.++|.|+.++++.  .|..+++.+++++++++|++.||++
T Consensus       159 ~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~~~~~~~~~~~~g~~l~~~~~~--~~~~~~~~~~v~~~g~~ii~~kg~~  236 (327)
T 1y7t_A          159 DHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDM--EWYEKVFIPTVAQRGAAIIQARGAS  236 (327)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECSSCEETTEEGGGTSCH--HHHHHTHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHhCcChhheeeeEEEcCCCCeEEEEeeeeeeCCeeHHHhccc--hhHHHHHHHHHHHHHHHHHHccCCC
Confidence            99999999999999999999976689999999999999999999999987643  3556899999999999999999988


Q ss_pred             cHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582         242 SAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELK  318 (329)
Q Consensus       242 ~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  318 (329)
                      ++++++.+++ +++++|++|  + +++|++++++|+||+|+|+|||+||++++|++++++.++|+++|+++|++|+++|+
T Consensus       237 ~~~~~a~a~~-~~~~~i~~~~~~~~~~~~~~~~~g~yg~~~~~~~~~P~~i~~G~~~i~~~~~l~~~e~~~l~~s~~~l~  315 (327)
T 1y7t_A          237 SAASAANAAI-EHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELL  315 (327)
T ss_dssp             CHHHHHHHHH-HHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHH-HHHHHHHcCCCCCeEEEEEEEecCccCCCCCeEEEEEEEEcCCeEEecCCCCCCHHHHHHHHHHHHHHH
Confidence            8887665544 788888888  6 99999999999999999999999999999999998768999999999999999999


Q ss_pred             HHHHHHHhh
Q psy9582         319 NEILSISHL  327 (329)
Q Consensus       319 ~~~~~~~~~  327 (329)
                      +.++.+.++
T Consensus       316 ~~~~~~~~~  324 (327)
T 1y7t_A          316 DEMEQVKAL  324 (327)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999988764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=100.00  E-value=2.4e-54  Score=402.53  Aligned_cols=297  Identities=20%  Similarity=0.271  Sum_probs=253.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe---ecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV---HENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~---~~~~~~a   80 (329)
                      +++||+||||+|++|++++..|+..++..     +|+|+|++    ++  .+.++|+.+...+  ..+..   +++.+++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~-----ev~l~Di~----~~--~~~~~dL~~~~~~--~~v~~~~~t~d~~~a   73 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS-----VLHLYDVV----NA--PGVTADISHMDTG--AVVRGFLGQQQLEAA   73 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEE-----EEEEEESS----SH--HHHHHHHHTSCSS--CEEEEEESHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEeCC----Cc--HhHHHHhhccccc--ceEEEEeCCCCHHHH
Confidence            45799999977999999999999887544     99999998    33  6678899875422  23444   4466789


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh----HHHHHHHHCCCCCCCcEE
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT----NTYITMKSAPDLSYKNFT  156 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~----~~~~~~~~~~~~~~~~i~  156 (329)
                      ++|||+||+++|.|+++|++|.+++.+|+++++++++++.+++ |+++|+++|||+|+    +++.+++.+ ++|++|++
T Consensus        74 l~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~~~~~~~t~~~~~~~-~~p~~rvi  151 (326)
T 1smk_A           74 LTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVNSTVPIAAEVFKKAG-TYDPKRLL  151 (326)
T ss_dssp             HTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHHHHHHT-CCCTTSEE
T ss_pred             cCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchHHHHHHHHHHHHHcc-CCCcccEE
Confidence            9999999999999999999999999999999999999999997 99999999999999    566667887 99999998


Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC-CCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHH
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH-SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h-g~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.|.||+.|+++++|+++|++|++|+.+ ||||| |++++|+||++++..    + ++++   ..+++.+++++++++|+
T Consensus       152 G~~~Ld~~r~~~~la~~l~v~~~~v~~~-v~G~H~G~~~~p~~s~~~v~~----~-~~~~---~~~~~~~~v~~~g~eii  222 (326)
T 1smk_A          152 GVTMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPS----S-FTQE---EISYLTDRIQNGGTEVV  222 (326)
T ss_dssp             ECCHHHHHHHHHHHHHHHTCCGGGCBCC-EEECSSGGGEEECGGGCBSCC----C-CCHH---HHHHHHHHHHHHHHHHH
T ss_pred             EEeehHHHHHHHHHHHHhCcChhheEEE-EecccCCceEEEecccCeecC----c-CCHH---HHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999976 89999 899999999999853    1 2232   34789999999999999


Q ss_pred             Hhc---CCccHHHHHHHHHHHHHHHH---hCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHH
Q psy9582         236 SIR---GASSAASAASAAIDHIKDWI---FGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSR  307 (329)
Q Consensus       236 ~~k---g~~~~~~~a~~~~~~l~~~i---~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~  307 (329)
                      +.|   |.+.++++ .+ +.+++++|   ++|+ .+++++ +++|+  +|+|+|||+||++ ++|++++++.++|+++|+
T Consensus       223 ~~k~~~gs~~~~~a-~a-~~~~~~ai~~~~~~~~~v~~~~-~~~g~--~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~  297 (326)
T 1smk_A          223 EAKAGAGSATLSMA-YA-AVKFADACLRGLRGDAGVIECA-FVSSQ--VTELPFFASKVRLGRNGIEEVYSLGPLNEYER  297 (326)
T ss_dssp             HHTTTSCCCCHHHH-HH-HHHHHHHHHHHHHTCSCEEEEE-EEECC--SSSSSEEEEEEEEETTEEEEECCCCCCCHHHH
T ss_pred             hcccCCCCcHHHHH-HH-HHHHHHHHHHHhCCCCeEEEEE-eeccc--cCCceEEEEEEEEeCCeeEEEcCCCCCCHHHH
Confidence            977   55545443 33 34777777   7787 999998 68887  4678999999999 999999987689999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC
Q psy9582         308 KKINLSIEELKNEILSISHLIR  329 (329)
Q Consensus       308 ~~l~~s~~~i~~~~~~~~~~~~  329 (329)
                      ++|++|+++|++.++.+.+|.+
T Consensus       298 ~~l~~s~~~l~~~~~~~~~~~~  319 (326)
T 1smk_A          298 IGLEKAKKELAGSIEKGVSFIR  319 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988753

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=100.00  E-value=4.9e-52  Score=386.04  Aligned_cols=306  Identities=21%  Similarity=0.289  Sum_probs=266.7

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~   79 (329)
                      |++++||+|||| |.+|++++..|+..++.      +|+|+|++    ++++++..+|+.+...  ....+++.+++. +
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~------~V~l~D~~----~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~   68 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLA------DVVLFDIA----EGIPQGKALDITHSMVMFGSTSKVIGTDDY-A   68 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCC------EEEEECSS----SSHHHHHHHHHHHHHHHHTCCCCEEEESCG-G
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCc------eEEEEeCC----chHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence            677789999999 99999999999998864      79999999    6777777777776431  122467776775 8


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-  158 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-  158 (329)
                      ++++||+||+++|.|+++|++|.+++.+|.++++++++++.+++ |+++++++|||++++++.+++.+ ++|++|++|+ 
T Consensus        69 a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~~~~~~~~~~~-~~~~~rviG~~  146 (317)
T 2ewd_A           69 DISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLDVMVSHFQKVS-GLPHNKVCGMA  146 (317)
T ss_dssp             GGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHHH-CCCGGGEEESC
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHhh-CCCHHHEEecc
Confidence            99999999999999999999999999999999999999999997 89999999999999999999988 8988997776 


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIIS  236 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~  236 (329)
                      |.+|+.|+++.+|+++|++++++.++ |||+||++++|+||+++++|+|+.+++.+.  +..+.+++.+.++.++++++.
T Consensus       147 t~ld~~r~~~~la~~lg~~~~~v~~~-v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~  225 (317)
T 2ewd_A          147 GVLDSSRFRTFIAQHFGVNASDVSAN-VIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVAD  225 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHhCcChhhceEE-EEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHH
Confidence            79999999999999999999999988 899999999999999999999999886442  011345666677788999998


Q ss_pred             --hcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582         237 --IRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL  312 (329)
Q Consensus       237 --~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~  312 (329)
                        ++|.+.|.++.  ++..++++|++|+ +++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++
T Consensus       226 ~~g~g~~~~~~a~--a~~~~~~ai~~~~~~~~~~~~~~~G~~g~-~~~~~~~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~  301 (317)
T 2ewd_A          226 NLKTGTAYFAPAA--AAVKMAEAYLKDKKAVVPCSAFCSNHYGV-KGIYMGVPTIIGKNGVEDILE-LDLTPLEQKLLGE  301 (317)
T ss_dssp             HHSSSCCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEESSSTTC-SSEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHH
T ss_pred             hhcCCchHHHHHH--HHHHHHHHHHcCCCeEEEEEEEecCccCC-cceEEEeEEEEcCCeeEEecC-CCCCHHHHHHHHH
Confidence              45656655443  2448899999998 999999999999999 89999999999 999999998 9999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q psy9582         313 SIEELKNEILSISH  326 (329)
Q Consensus       313 s~~~i~~~~~~~~~  326 (329)
                      |++.|++.++.+.+
T Consensus       302 s~~~l~~~~~~~~~  315 (317)
T 2ewd_A          302 SINEVNTISKVLDN  315 (317)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999988754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=5.1e-51  Score=377.93  Aligned_cols=298  Identities=16%  Similarity=0.204  Sum_probs=256.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~~~~al~~a   84 (329)
                      +||+|||+ |.+|++++..|+..++..     +|+|+|++    ++++++...++.+........+.+ +++. +++++|
T Consensus         2 ~kI~VIGa-G~~G~~la~~L~~~g~~~-----~V~l~d~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~a   70 (309)
T 1hyh_A            2 RKIGIIGL-GNVGAAVAHGLIAQGVAD-----DYVFIDAN----EAKVKADQIDFQDAMANLEAHGNIVINDW-AALADA   70 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEcCC----HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCC
Confidence            48999998 999999999999888533     89999999    777887777776553211123444 4554 899999


Q ss_pred             cEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-c
Q psy9582          85 NIAILIGSFPRK----SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-L  159 (329)
Q Consensus        85 DiVi~~~g~~~~----~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t  159 (329)
                      |+||++.+.+++    +|++|.+++.+|+++++++++.+.+++ |+++++++|||++++++++++.+ ++|++|++|+ |
T Consensus        71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~~~~~~~~~-~~~~~rvig~gt  148 (309)
T 1hyh_A           71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDVITALFQHVT-GFPAHKVIGTGT  148 (309)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEECTT
T ss_pred             CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHHHHHHHHHhc-CCCHHHEeecCc
Confidence            999999999988    999999999999999999999999997 99999999999999999999987 8999998777 9


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhh--ccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMI--NNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~--~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      .+|+.|+++.+++.+++++.+++.+ +||+||++++|+||+++++|.|+.++.  .++   ..+++.++++++++++++.
T Consensus       149 ~ld~~r~~~~~a~~l~~~~~~v~~~-v~G~hg~~~~~~~s~~~v~g~~~~~~~~~~~~---~~~~~~~~v~~~g~~ii~~  224 (309)
T 1hyh_A          149 LLDTARMQRAVGEAFDLDPRSVSGY-NLGEHGNSQFVAWSTVRVMGQPIVTLADAGDI---DLAAIEEEARKGGFTVLNG  224 (309)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCBCC-EEBCTTTTCEECTTTCEETTEEGGGC-----C---CHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhCCChhheEEE-EEeCCCCcEeeccccceECCEEHHHhccCCHH---HHHHHHHHHHHhHHHHHhc
Confidence            9999999999999999999999977 899999999999999999999999873  333   3378999999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||.+.++.+.+  +..++++|++|+ .++|++++++|     +|+|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       225 kg~~~~~~a~a--~~~~~~ai~~~~~~~~~~~~~~~g-----~~~~~~vP~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~  296 (309)
T 1hyh_A          225 KGYTSYGVATS--AIRIAKAVMADAHAELVVSNRRDD-----MGMYLSYPAIIGRDGVLAETT-LDLTTDEQEKLLQSRD  296 (309)
T ss_dssp             HSSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEECTT-----TCSEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             cCCchHHHHHH--HHHHHHHHHcCCCcEEEEEEEECC-----CCeEEEEEEEEeCCceEEEeC-CCCCHHHHHHHHHHHH
Confidence            99877765543  448999999998 99999999998     57899999999 999999998 8999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy9582         316 ELKNEILSISHLI  328 (329)
Q Consensus       316 ~i~~~~~~~~~~~  328 (329)
                      +|++.++.+.+.|
T Consensus       297 ~l~~~~~~~~~~~  309 (309)
T 1hyh_A          297 YIQQRFDEIVDTL  309 (309)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhhhC
Confidence            9999999887654

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=8.9e-46  Score=356.95  Aligned_cols=305  Identities=10%  Similarity=0.089  Sum_probs=234.6

Q ss_pred             CCCCCCEEEEEcCCCch-HHHHHHHHHh--CCC-CCCCCCceEEEEecCCcccc--cchhhhHhhhhhcc---cCCccce
Q psy9582           1 MLKKPVRISITGAAGQI-GYNIIFRIAN--GDL-LGKDQPIILQLLEASNKKSQ--KAIKGVIMEIEDCI---FPLLVDV   71 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~v-G~~la~~l~~--~~~-~~~~~~~ei~L~D~~~~~~~--~~~~~~~~dl~~~~---~~~~~~i   71 (329)
                      ||++++||+|||| |++ |.+++..|+.  .++ ..     ||+|+|++    +  +++++. .|+.+..   .....++
T Consensus         3 ~m~~~~KIaVIGa-Gsv~~~al~~~L~~~~~~l~~~-----ev~L~Di~----~~~e~~~~~-~~~~~~~~~~~~~~~~i   71 (450)
T 1s6y_A            3 AMDKRLKIATIGG-GSSYTPELVEGLIKRYHELPVG-----ELWLVDIP----EGKEKLEIV-GALAKRMVEKAGVPIEI   71 (450)
T ss_dssp             ----CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEE-----EEEEECCG----GGHHHHHHH-HHHHHHHHHHTTCCCEE
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHHcCCCCCCCC-----EEEEEEcC----CChHHHHHH-HHHHHHHHhhcCCCcEE
Confidence            5755789999999 888 7777777876  444 33     89999999    6  777763 3554332   1223467


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhcCCCeEEEE
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSE--------------------LLAINSSIFIEQGKALNSVASRDVKVLV  131 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~--------------------~~~~n~~~~~~i~~~i~~~~~p~a~viv  131 (329)
                      +.++|.+++++|||+||++++.+++++++|++                    ++.+|+++++++++.|+++| |+||+|+
T Consensus        72 ~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~  150 (450)
T 1s6y_A           72 HLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN  150 (450)
T ss_dssp             EEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred             EEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE
Confidence            77788779999999999999999888777764                    47899999999999999998 9999999


Q ss_pred             EcCchhhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-----------cCCCceeecccC
Q psy9582         132 VGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-----------NHSLSMYPDYRY  200 (329)
Q Consensus       132 ~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-----------~hg~~~~p~~s~  200 (329)
                      +|||+|++|+++++++   |++|++|.|... .|+++.+|+.+|++|++|+.+ ++|           +||++++|.||.
T Consensus       151 ~tNPvdivT~a~~k~~---p~~rViG~c~~~-~r~~~~la~~lgv~~~~v~~~-v~GlNH~~w~~~v~~~G~d~~p~~~~  225 (450)
T 1s6y_A          151 FTNPAGMVTEAVLRYT---KQEKVVGLCNVP-IGMRMGVAKLLGVDADRVHID-FAGLNHMVFGLHVYLDGVEVTEKVID  225 (450)
T ss_dssp             CSSSHHHHHHHHHHHC---CCCCEEECCSHH-HHHHHHHHHHHTSCGGGEEEE-EEEETTEEEEEEEEETTEECHHHHHH
T ss_pred             eCCcHHHHHHHHHHhC---CCCCEEEeCCcH-HHHHHHHHHHhCCCHHHcEEE-EEeeecceeEEEeeeCCcCchHhHHH
Confidence            9999999999999997   566887776554 599999999999999999988 689           899999999988


Q ss_pred             Ceec----c--------eehh------------hhhcc----Cc---cc--------hhhhHHHHHhhhhHHHH-----H
Q psy9582         201 ATVN----G--------VLIR------------DMINN----NS---FW--------NKNVFLPAISRRGEEII-----S  236 (329)
Q Consensus       201 ~~v~----~--------~p~~------------~~~~~----~~---~~--------~~~~l~~~v~~~~~~i~-----~  236 (329)
                      ..++    |        .|+.            +|++.    +.   .|        .+.++.+++++.+++++     .
T Consensus       226 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~  305 (450)
T 1s6y_A          226 LVAHPDRSGVTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLA  305 (450)
T ss_dssp             HHSCC------------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC---
T ss_pred             HHhhhccccccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccc
Confidence            5543    2        2331            11110    00   00        12345566777788888     4


Q ss_pred             hcC-----CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHH
Q psy9582         237 IRG-----ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRK  308 (329)
Q Consensus       237 ~kg-----~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~  308 (329)
                      .|+     +++++++.  ++..|+++|++|+ .+++||++++|+| |+|+|+++|+||++ ++|+.++.. ++|+++|++
T Consensus       306 ~k~~~~~~~~~~~~~~--~a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~-~~L~~~e~~  382 (450)
T 1s6y_A          306 IKPPQLEKRGGAYYSD--AACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRG  382 (450)
T ss_dssp             --------CCSCCHHH--HHHHHHHHHHHTCCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHH
T ss_pred             cccchhhcccchHHHH--HHHHHHHHHHcCCCeEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeec-CCCCHHHHH
Confidence            443     34434443  2348999999998 9999999999998 79999999999999 999999998 999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy9582         309 KINLSIEELKNEILSIS  325 (329)
Q Consensus       309 ~l~~s~~~i~~~~~~~~  325 (329)
                      +++.++..-+-.++++.
T Consensus       383 l~~~~~~~e~l~veAa~  399 (450)
T 1s6y_A          383 LVQQIKSFERVAAEAAV  399 (450)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99998877666666543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=100.00  E-value=4.8e-44  Score=332.30  Aligned_cols=301  Identities=18%  Similarity=0.255  Sum_probs=259.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al   81 (329)
                      +++||+|||| |.+|++++..|+..++++     +|+|+|++    ++++++.++|+.+.. ++.  .++..+++ ++++
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~-----~V~l~d~~----~~~~~~~~~~~~~~~-~~~~~~~v~~~~~-~~~~   73 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAR-----EIVLEDIA----KERVEAEVLDMQHGS-SFYPTVSIDGSDD-PEIC   73 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS----HHHHHHHHHHHHHTG-GGSTTCEEEEESC-GGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----hhHHHHHHHHHHhhh-hhcCCeEEEeCCC-HHHh
Confidence            3579999999 999999999999988766     89999999    666776677776643 222  23444444 6899


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-ech
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLR  160 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~  160 (329)
                      ++||+||++.+.++++|++|.+++.+|+++++++++.+.+++ |+++|++++||++.+++++++.+ ++|++++++ +|.
T Consensus        74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~-~~~~vi~~~Np~~~~~~~~~~~~-~~~~~~vig~~~~  151 (319)
T 1lld_A           74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIYMLITNPVDIATHVAQKLT-GLPENQIFGSGTN  151 (319)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHHH-TCCTTSEEECTTH
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEecCchHHHHHHHHHhc-CCCHHHEeecccc
Confidence            999999999999999999999999999999999999999996 99999999999999999998887 899888755 599


Q ss_pred             hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc------hhhhHHHHHhhhhHHH
Q psy9582         161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW------NKNVFLPAISRRGEEI  234 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~------~~~~l~~~v~~~~~~i  234 (329)
                      +|+.|++..+++.+++++.+++.+ +||+||++++|+|+++.+++.|+..+.... .|      ..+++.+.+++.+++|
T Consensus       152 l~~~r~~~~~a~~~~v~~~~v~~~-~~G~~g~~~~~~w~k~~in~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~~e~~~v  229 (319)
T 1lld_A          152 LDSARLRFLIAQQTGVNVKNVHAY-IAGEHGDSEVPLWESATIGGVPMSDWTPLP-GHDPLDADKREEIHQEVKNAAYKI  229 (319)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECTTSCEETTEEGGGCCCCT-TCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHhCCCHHHeEEE-EEeCCCCceeeeeecceECCccHHHHHhcc-ccccCCHHHHHHHHHHHHHhhHhh
Confidence            999999999999999999999976 799999999999999999999998775332 11      1467788889999999


Q ss_pred             HHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582         235 ISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL  312 (329)
Q Consensus       235 ~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~  312 (329)
                      ++.+|.+.+..+.+  ...+.+.+.++. .++++|.+++|+|+. .+.++|+||.+ ++|++++++ ++|+++|+++|++
T Consensus       230 ~~~~G~~~~~~a~~--~~sm~~di~~~~~~ei~~s~~~~G~~~~-~~~~~gvp~~~~~~Gv~~i~~-~~l~~~e~~~l~~  305 (319)
T 1lld_A          230 INGKGATNYAIGMS--GVDIIEAVLHDTNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTIN-TPVSDKELAALKR  305 (319)
T ss_dssp             HTSCCSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEECSSBTTB-CSSEEEEEEEEETTEEECCSC-CCCCHHHHHHHHH
T ss_pred             hhCCCCchHHHHHH--HHHHHHHHHcCCCcEEEEEEEecCcCCc-cceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHH
Confidence            99999877665543  347888888887 999999999999988 89999999999 999999999 9999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         313 SIEELKNEILSI  324 (329)
Q Consensus       313 s~~~i~~~~~~~  324 (329)
                      |++.|++.++.+
T Consensus       306 s~~~l~~~~~~~  317 (319)
T 1lld_A          306 SAETLKETAAQF  317 (319)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754

>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A

Probab=100.00  E-value=8.4e-45  Score=347.02  Aligned_cols=298  Identities=14%  Similarity=0.119  Sum_probs=232.8

Q ss_pred             CCEEEEEcCCCch-HHHHHHHHHh--CCC-CCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQI-GYNIIFRIAN--GDL-LGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~v-G~~la~~l~~--~~~-~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ++||+|||| |++ +..++..|+.  .++ .+     ||+|+|++    ++++++ +.|+.+.......+++.++|.+++
T Consensus         2 ~~KI~IIGa-G~v~~~~l~~~l~~~~~~l~~~-----el~L~Di~----~~~~~~-~~~~~~~~~~~~~~v~~t~d~~~a   70 (417)
T 1up7_A            2 HMRIAVIGG-GSSYTPELVKGLLDISEDVRID-----EVIFYDID----EEKQKI-VVDFVKRLVKDRFKVLISDTFEGA   70 (417)
T ss_dssp             CCEEEEETT-TCTTHHHHHHHHHHHTTTSCCC-----EEEEECSC----HHHHHH-HHHHHHHHHTTSSEEEECSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcccCCCcC-----EEEEEeCC----HHHHHH-HHHHHHHHhhCCeEEEEeCCHHHH
Confidence            479999999 665 3333445565  555 44     99999999    677775 677766431111456666777799


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          81 FKDANIAILIGSFPRKSNMERSE--------------------LLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~--------------------~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                      ++||||||+++|.+++++++|++                    ++.+|+++++++++.|+++|  |||+|++|||++++|
T Consensus        71 l~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvdi~t  148 (417)
T 1up7_A           71 VVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSGHIT  148 (417)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHHHHH
T ss_pred             hCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHHHHH
Confidence            99999999999998887777642                    46899999999999999996  999999999999999


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-----------cCCCceeecccCC---eecc-
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-----------NHSLSMYPDYRYA---TVNG-  205 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-----------~hg~~~~p~~s~~---~v~~-  205 (329)
                      +++++++   |++|++|.|... .|+++.+|+.+|++|++|+.+ ++|           +||++++|.||..   ++.+ 
T Consensus       149 ~a~~k~~---p~~rviG~c~~~-~r~~~~la~~lgv~~~~v~~~-v~GlNH~~w~~~~~~hG~d~~p~~~~~~~~~~~~~  223 (417)
T 1up7_A          149 EFVRNYL---EYEKFIGLCNVP-INFIREIAEMFSARLEDVFLK-YYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNI  223 (417)
T ss_dssp             HHHHHTT---CCSSEEECCSHH-HHHHHHHHHHTTCCGGGEEEE-EEEETTEEEEEEEEETTEECHHHHHHHHTTC---C
T ss_pred             HHHHHhC---CCCCEEEeCCCH-HHHHHHHHHHhCCCHHHCeEE-EEeecceeeEEEeecCCcEehhhHHHHHHHhhCCC
Confidence            9999986   566877766443 499999999999999999988 789           9999999999996   5554 


Q ss_pred             --eehh-hhhccC---c-c---c------h---------hhhHHHHHhhhhHHHH----------HhcCCccHHHHHHHH
Q psy9582         206 --VLIR-DMINNN---S-F---W------N---------KNVFLPAISRRGEEII----------SIRGASSAASAASAA  250 (329)
Q Consensus       206 --~p~~-~~~~~~---~-~---~------~---------~~~l~~~v~~~~~~i~----------~~kg~~~~~~~a~~~  250 (329)
                        .|+. ++++..   | .   |      .         +.+..+++++.+++++          ..||++.+  +.  +
T Consensus       224 ~~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l~~kg~t~~--~~--~  299 (417)
T 1up7_A          224 PDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMY--ST--A  299 (417)
T ss_dssp             CTTSCCHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGSTTTTH--HH--H
T ss_pred             cCCchHHHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhhhhcCCcHH--HH--H
Confidence              5662 332100   0 0   0      1         1222456667788888          44565433  32  2


Q ss_pred             HHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9582         251 IDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS  325 (329)
Q Consensus       251 ~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~  325 (329)
                      +..++++|++|+ .++++|++++|+| |+|+|+++|+||++ ++|+.++.. ++|+++|+++++.++...+..++++.
T Consensus       300 a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~-~~L~~~e~~~l~~~~~~e~l~veA~~  376 (417)
T 1up7_A          300 AAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAVKMYERLTIEAYL  376 (417)
T ss_dssp             HHHHHHHHHSSSCEEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCeEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeec-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            348999999998 9999999999999 79999999999999 999999998 99999999999999999998888764

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=6.7e-44  Score=345.22  Aligned_cols=304  Identities=13%  Similarity=0.145  Sum_probs=227.4

Q ss_pred             CCCCCCEEEEEcCCCch-HHHHHHHHHhC--CC-CCCCCCceEEEEecCCcccccchhhhHhhhhhccc---CCccceEe
Q psy9582           1 MLKKPVRISITGAAGQI-GYNIIFRIANG--DL-LGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSV   73 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~v-G~~la~~l~~~--~~-~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~   73 (329)
                      ||++++||+|||| |++ |.+++..|+..  ++ ..     ||+|+|++    ++++++. .|+.+...   ....+++.
T Consensus        24 m~m~~~KIaVIGa-Gsv~~~ala~~L~~~~~~l~~~-----eV~L~Di~----~e~~~~~-~~~~~~~l~~~~~~~~I~~   92 (472)
T 1u8x_X           24 MKKKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIR-----KLKLYDND----KERQDRI-AGACDVFIREKAPDIEFAA   92 (472)
T ss_dssp             --CCCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEE-----EEEEECSC----HHHHHHH-HHHHHHHHHHHCTTSEEEE
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHHhCCCCCCCC-----EEEEEeCC----HHHHHHH-HHHHHHHhccCCCCCEEEE
Confidence            5445689999999 888 55678788876  55 33     89999999    6777764 46654321   23357888


Q ss_pred             ecCcccccCCccEEEEeCCCCCCCCCCHH--------------------HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          74 HENPITAFKDANIAILIGSFPRKSNMERS--------------------ELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~--------------------~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++|.+++++|||+||++++.+++++++|+                    +++.+|+++++++++.|+++| |+||+|++|
T Consensus        93 t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~T  171 (472)
T 1u8x_X           93 TTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYS  171 (472)
T ss_dssp             ESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred             ECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeC
Confidence            88877999999999999999887777764                    447899999999999999998 999999999


Q ss_pred             CchhhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCC-CCeeEEEEEe-----------c-CCCceeecccC
Q psy9582         134 NPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPV-SSIKKVFVWG-----------N-HSLSMYPDYRY  200 (329)
Q Consensus       134 NP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~-~~v~~~~v~G-----------~-hg~~~~p~~s~  200 (329)
                      ||+|++|+++++.+   |++|++|.|... .|+++.+|+.+|++| ++|+.+ ++|           + ||++++|.||.
T Consensus       172 NPvdi~T~~~~k~~---p~~rViG~c~~~-~r~~~~la~~lgv~~~~~v~~~-v~GlNH~~W~~~~~~~hG~d~~p~~~~  246 (472)
T 1u8x_X          172 NPAAIVAEATRRLR---PNSKILNICDMP-VGIEDRMAQILGLSSRKEMKVR-YYGLNHFGWWTSIQDQEGNDLMPKLKE  246 (472)
T ss_dssp             SCHHHHHHHHHHHS---TTCCEEECCSHH-HHHHHHHHHHHTCSCGGGEEEE-EEEETTEEEEEEEEETTCCBCHHHHHH
T ss_pred             CcHHHHHHHHHHhC---CCCCEEEeCCcH-HHHHHHHHHHhCcCchhceeEE-EeccchhhheeeeEeCCCCEehHhHHH
Confidence            99999999999987   566887776544 499999999999998 999988 689           8 99999999998


Q ss_pred             Cee-cc-----------eehh-hhhcc----------Cc-c---c--hhhhHHH----------HHhh-hh---HHHHH-
Q psy9582         201 ATV-NG-----------VLIR-DMINN----------NS-F---W--NKNVFLP----------AISR-RG---EEIIS-  236 (329)
Q Consensus       201 ~~v-~~-----------~p~~-~~~~~----------~~-~---~--~~~~l~~----------~v~~-~~---~~i~~-  236 (329)
                      ..+ +|           .|+. +++..          -| .   |  ..+++.+          .+++ ++   +++++ 
T Consensus       247 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~  326 (472)
T 1u8x_X          247 HVSQYGYIPKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDM  326 (472)
T ss_dssp             HHHHHSSCCCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHH
T ss_pred             HHHhcCCCccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh
Confidence            654 22           1221 11100          00 0   1  0122222          2222 22   22222 


Q ss_pred             h--cC---CccH---HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHH
Q psy9582         237 I--RG---ASSA---ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKF  305 (329)
Q Consensus       237 ~--kg---~~~~---~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~  305 (329)
                      .  +|   .+.+   +++.+  +..|+++|++|+ .+++|+++++|+| |+|+|+++|+||++ ++|+.++.. ++|+++
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~--a~~ii~AI~~d~~~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~-~~Lp~~  403 (472)
T 1u8x_X          327 ITREQSSENSEIKIDDHASY--IVDLARAIAYNTGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQF  403 (472)
T ss_dssp             HHHHTSCCSCSSCCCTTTHH--HHHHHHHHHHTCCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHH
T ss_pred             hhhcCCcccccccccHHHHH--HHHHHHHHhcCCCeEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeec-CCCCHH
Confidence            3  45   2222   45443  348999999998 9999999999998 79999999999999 999999998 999999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q psy9582         306 SRKKINLSIEELKNEILSI  324 (329)
Q Consensus       306 E~~~l~~s~~~i~~~~~~~  324 (329)
                      |+++++.-...-+-.++++
T Consensus       404 ~~~l~~~~~~~e~l~veAa  422 (472)
T 1u8x_X          404 QKGLMEQQVSVEKLTVEAW  422 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999988665555445443

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=100.00  E-value=1.2e-36  Score=292.00  Aligned_cols=300  Identities=16%  Similarity=0.130  Sum_probs=216.3

Q ss_pred             CCCCCCEEEEEcCCCch--HHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQI--GYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~v--G~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~   77 (329)
                      |+++++||+|||| |++  |..++..|+... +.+     +|+|+|++    +++++.... +.+.......+++.|+|+
T Consensus         1 m~m~~~KIaVIGa-Gs~g~g~~la~~l~~~~~~~g-----eV~L~Di~----~e~le~~~~-~~~~l~~~~~~I~~TtD~   69 (450)
T 3fef_A            1 MSLDQIKIAYIGG-GSQGWARSLMSDLSIDERMSG-----TVALYDLD----FEAAQKNEV-IGNHSGNGRWRYEAVSTL   69 (450)
T ss_dssp             --CCCEEEEEETT-TCSSHHHHHHHHHHHCSSCCE-----EEEEECSS----HHHHHHHHH-HHTTSTTSCEEEEEESSH
T ss_pred             CCCCCCEEEEECC-ChhHhHHHHHHHHHhccccCC-----eEEEEeCC----HHHHHHHHH-HHHHHhccCCeEEEECCH
Confidence            5455689999999 986  568888888643 233     89999999    555542211 111111133578889999


Q ss_pred             ccccCCccEEEEeCC------------CCCCCCCCHH----------HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGS------------FPRKSNMERS----------ELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g------------~~~~~g~~~~----------~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ++|++||||||++..            .|+|+|+.+.          ....+|+++++++++.|+++| |+||+|++|||
T Consensus        70 ~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~-p~a~~i~~tNP  148 (450)
T 3fef_A           70 KKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYA-PESWVINYTNP  148 (450)
T ss_dssp             HHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSS
T ss_pred             HHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHC-CCeEEEEecCc
Confidence            999999999999874            5778887544          445699999999999999998 99999999999


Q ss_pred             hhhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHh----C---CCCCCeeEEEEEe-cCCCceeecccCCeeccee
Q psy9582         136 VNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKL----N---EPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVL  207 (329)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l----~---~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p  207 (329)
                      +|++|+++++..   |+.|++|+|... .+++..+|+.|    |   +++++++.. +.| ||    +.||++.+++|.+
T Consensus       149 vdi~t~~~~k~~---p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~-~~GlNH----~~w~~~~~~~G~d  219 (450)
T 3fef_A          149 MSVCTRVLYKVF---PGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPRREDIRVN-VLGINH----FTWITKASYRHID  219 (450)
T ss_dssp             HHHHHHHHHHHC---TTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEE-EEEETT----EEEEEEEEETTEE
T ss_pred             hHHHHHHHHHHC---CCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEE-EeeecC----eEeEEEEEECCEE
Confidence            999999999874   567898988776 78999999999    5   779999977 578 99    9999999999998


Q ss_pred             hhhhh----cc---C---c---cch----------hhhHHHHH-------------------------------------
Q psy9582         208 IRDMI----NN---N---S---FWN----------KNVFLPAI-------------------------------------  227 (329)
Q Consensus       208 ~~~~~----~~---~---~---~~~----------~~~l~~~v-------------------------------------  227 (329)
                      +...+    .+   .   +   .|.          +-++.+..                                     
T Consensus       220 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~  299 (450)
T 3fef_A          220 LLPIFREFSAHYGESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRK  299 (450)
T ss_dssp             HHHHHHHHHHHHTTTCCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHH
T ss_pred             ChHHHHHHHHhhcccccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHH
Confidence            87422    10   0   0   010          00111110                                     


Q ss_pred             ---hhhhHHHHHh-cCCccH---HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEec
Q psy9582         228 ---SRRGEEIISI-RGASSA---ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKII  297 (329)
Q Consensus       228 ---~~~~~~i~~~-kg~~~~---~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~  297 (329)
                         .++..+..+. .+...+   .+ +.+ +..|+++|++|+ .++++|++++|+| |+|+|+++|+||++ ++|+.++.
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~e~-~~~ii~aI~~d~~~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~  377 (450)
T 3fef_A          300 QDRAEKRQETERLIVQQRGVAEKAS-GEE-GVNIIAALLGLGELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPIL  377 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCSCC-SCC-HHHHHHHHTTSCCEEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBC
T ss_pred             HHHHHHHHHHHHHhcCCcCcCcCcc-HHH-HHHHHHHHHcCCCeEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceecc
Confidence               0000000000 000000   00 011 238999999998 9999999999997 89999999999999 99999998


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9582         298 QNLEIDKFSRKKINLSIEELKNEILSI  324 (329)
Q Consensus       298 ~~~~l~~~E~~~l~~s~~~i~~~~~~~  324 (329)
                      . .+|++.++++++.....-+-.++++
T Consensus       378 ~-g~Lp~~~~~l~~~~~~~e~l~veAa  403 (450)
T 3fef_A          378 S-GALPKGVEMLAARHISNQEAVADAG  403 (450)
T ss_dssp             C-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8 9999999999887655555445444

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=1.1e-32  Score=266.57  Aligned_cols=292  Identities=14%  Similarity=0.151  Sum_probs=203.7

Q ss_pred             CCEEEEEcCCCchH--HHHHHHHHhC-CC-CCCCCCceEEEEecCCcccccchhhhHhhhhhcc---cCCccceEeecCc
Q psy9582           5 PVRISITGAAGQIG--YNIIFRIANG-DL-LGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI---FPLLVDVSVHENP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG--~~la~~l~~~-~~-~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~---~~~~~~i~~~~~~   77 (329)
                      ++||+|||| |+||  .+++..|+.. ++ ..     +|+|+|++    ++++++. .+..+..   .....+++.++|.
T Consensus         3 ~~KIaVIGA-GsVg~g~ala~~La~~~~l~~~-----eV~L~Di~----~e~l~~~-~~~~~~~l~~~~~~~~I~~ttD~   71 (480)
T 1obb_A            3 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGS-----TVTLMDID----EERLDAI-LTIAKKYVEEVGADLKFEKTMNL   71 (480)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTC-----EEEEECSC----HHHHHHH-HHHHHHHHHHTTCCCEEEEESCH
T ss_pred             CCEEEEECC-CchHHHHHHHHHHHhcCcCCCC-----EEEEEeCC----HHHHHHH-HHHHHHHhccCCCCcEEEEECCH
Confidence            479999999 9875  5557778743 33 22     99999999    6777763 3333221   1233578888887


Q ss_pred             ccccCCccEEEEeCCC------------CCCCCCCH--------------HHHHHHHHHHHHHHHHHHhhhcCCCeEEEE
Q psy9582          78 ITAFKDANIAILIGSF------------PRKSNMER--------------SELLAINSSIFIEQGKALNSVASRDVKVLV  131 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~------------~~~~g~~~--------------~~~~~~n~~~~~~i~~~i~~~~~p~a~viv  131 (329)
                      +++++|||+||++++.            |+|+|+.+              ..++.+|+++++++++.|+++| |+||+|+
T Consensus        72 ~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~-P~A~ii~  150 (480)
T 1obb_A           72 DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQ  150 (480)
T ss_dssp             HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred             HHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-CCeEEEE
Confidence            7999999999999875            34555433              2357899999999999999998 9999999


Q ss_pred             EcCchhhHHHHHHHHCCCCCCCcEEEec-hhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehh
Q psy9582         132 VGNPVNTNTYITMKSAPDLSYKNFTAML-RLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIR  209 (329)
Q Consensus       132 ~tNP~~~~~~~~~~~~~~~~~~~i~~~t-~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~  209 (329)
                      +|||++++|++++++    |++|++|.| .++  ++++.+ +.+|++|++|+.+ |+| ||    +.||.+.+.+|..+.
T Consensus       151 ~TNPvdi~t~~~~k~----p~~rviG~c~~~~--~~~~~l-~~lgv~~~~v~~~-v~GlNH----~~w~~~~~~~G~D~~  218 (480)
T 1obb_A          151 AANPIFEGTTLVTRT----VPIKAVGFCHGHY--GVMEIV-EKLGLEEEKVDWQ-VAGVNH----GIWLNRFRYNGGNAY  218 (480)
T ss_dssp             CSSCHHHHHHHHHHH----SCSEEEEECSGGG--HHHHHH-HHTTCCGGGEEEE-EEEETT----EEEEEEEEETTEECH
T ss_pred             eCCcHHHHHHHHHHC----CCCcEEecCCCHH--HHHHHH-HHhCCCHHHceEE-EEeecc----hhhhhheeeCCeEcH
Confidence            999999999999884    567876665 665  478999 9999999999988 456 99    777766665554332


Q ss_pred             hhhc-----------------c--C-------------c--------cch------h------------h----------
Q psy9582         210 DMIN-----------------N--N-------------S--------FWN------K------------N----------  221 (329)
Q Consensus       210 ~~~~-----------------~--~-------------~--------~~~------~------------~----------  221 (329)
                      ..+.                 +  .             |        .|.      +            +          
T Consensus       219 p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~  298 (480)
T 1obb_A          219 PLLDKWIEEKSKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQD  298 (480)
T ss_dssp             HHHHHHHHHTGGGCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHH
T ss_pred             HHHHHHHHccCccccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhcccccccccHhHHH
Confidence            1000                 0  0             0        011      1            0          


Q ss_pred             ---hHHHHHhhhhHHHHHhcC-----------CccH----------------HHHHHHHHHHHHHHHhCCC-cEEEEEee
Q psy9582         222 ---VFLPAISRRGEEIISIRG-----------ASSA----------------ASAASAAIDHIKDWIFGTE-NWVTMGIP  270 (329)
Q Consensus       222 ---~l~~~v~~~~~~i~~~kg-----------~~~~----------------~~~a~~~~~~l~~~i~~~~-~i~~~~v~  270 (329)
                         +..+...+.-+++.+...           .+++                .++ -.++ .++++|.+|+ .++.++|.
T Consensus       299 ~~~e~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-e~a~-~ii~ai~~~~~~~~~vnv~  376 (480)
T 1obb_A          299 TLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSG-EQHI-PFIDALLNDNKARFVVNIP  376 (480)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCS-CSHH-HHHHHHHHCCCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccchhhh-HHHH-HHHHHHHhCCCeEEEEEee
Confidence               001111111122322211           0111                011 1123 7899999998 99999999


Q ss_pred             cCCC-CCCCCCeEEEEeEEE-cCccEEeccCCC-CCHHHHHH-HHHHHHHHHHHHHH
Q psy9582         271 SDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLE-IDKFSRKK-INLSIEELKNEILS  323 (329)
Q Consensus       271 ~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~-l~~~E~~~-l~~s~~~i~~~~~~  323 (329)
                      ++|. .++|+|+++++||++ ++|+.++.- .+ |++..+++ ++.-...-+-.+++
T Consensus       377 N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~l~~~~~~~~e~l~veA  432 (480)
T 1obb_A          377 NKGIIHGIDDDVVVEVPALVDKNGIHPEKI-EPPLPDRVVKYYLRPRIMRMEMALEA  432 (480)
T ss_dssp             CTTSSTTSCTTSEEEEEEEEETTEEEECCC-SSCCCHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCceeCCCCCCeEEEEEEEEcCCCCEeecc-CCCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            9996 899999999999999 999999987 88 99999999 77655544444443

>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*

Probab=99.98  E-value=1.7e-31  Score=259.40  Aligned_cols=282  Identities=16%  Similarity=0.143  Sum_probs=195.8

Q ss_pred             CEEEEEcCCCchHHH--HHHHHHhCCCCC-CCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYN--IIFRIANGDLLG-KDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~--la~~l~~~~~~~-~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~a   80 (329)
                      +||+|||| |++|.+  +...++....++ ..  .+|+|+|++    ++++++...++++...  ....+++.|+|.++|
T Consensus         1 mKI~iIGa-Gs~~~t~~l~~~~~~~~~l~~~~--~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eA   73 (477)
T 3u95_A            1 MKISIVGA-GSVRFALQLVEDIAQTDELSRED--THIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDEA   73 (477)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTCTTTCSTT--CEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHH
T ss_pred             CEEEEECC-CchhhHHHHHHHHHhhHhcCCCC--CEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            69999999 998866  344455543332 11  289999999    7888888888876542  233578889999999


Q ss_pred             cCCccEEEEeCCC-------------------CCCCCCCHHHH---------------HHHHHHHHHHHHHHHhhhcCCC
Q psy9582          81 FKDANIAILIGSF-------------------PRKSNMERSEL---------------LAINSSIFIEQGKALNSVASRD  126 (329)
Q Consensus        81 l~~aDiVi~~~g~-------------------~~~~g~~~~~~---------------~~~n~~~~~~i~~~i~~~~~p~  126 (329)
                      ++||||||+++|.                   |+|+|++|..+               ..+|++++.++++.|+++| ||
T Consensus        74 l~gAD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~-P~  152 (477)
T 3u95_A           74 IEGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA-PK  152 (477)
T ss_dssp             HTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC-TT
T ss_pred             hCCCCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC-CC
Confidence            9999999999864                   33566554432               2368999999999999998 99


Q ss_pred             eEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecce
Q psy9582         127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGV  206 (329)
Q Consensus       127 a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~  206 (329)
                      ||+|++|||++++|+++++++ ++   |++|+|.-  .+....+++.||+++++|+..+..-||    +.||...+.+|.
T Consensus       153 A~~in~tNP~~i~t~a~~~~~-~~---k~vGlC~~--~~~~~~~~~~Lg~~~~~v~~~~~GlNH----~~w~~~~~~~G~  222 (477)
T 3u95_A          153 AYLMQTANPVFEITQAVRRWT-GA---NIIGFCHG--VAGVYEVFERLGLDPEEVDWQVAGVNH----GIWLNRFRYRGK  222 (477)
T ss_dssp             CEEEECSSCHHHHHHHHHHHH-CC---CEEEECCG--GGHHHHHHHHTTCCGGGEEEEEEEETT----EEEEEEEEETTE
T ss_pred             eEEEEecChHHHHHHHHHHhC-CC---CeEEECCC--HHHHHHHHHHhCCCHHHcEEEEeecCC----CeeeeeeeecCC
Confidence            999999999999999999987 54   68888853  334456778899999999988543488    666666666665


Q ss_pred             ehhhhh----cc-----Cc------cc-----------------------------hhhh-------------------H
Q psy9582         207 LIRDMI----NN-----NS------FW-----------------------------NKNV-------------------F  223 (329)
Q Consensus       207 p~~~~~----~~-----~~------~~-----------------------------~~~~-------------------l  223 (329)
                      .+...+    ..     ++      .|                             ..++                   +
T Consensus       223 D~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~r~~g~~p~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (477)
T 3u95_A          223 DAYPLLDEWIEKELSKWEPKNPWDTQMSPAAMDMYRFYGMLPIGDTVRNGTWKYHYNLETKKKWFRRFGGIDNEVERPKF  302 (477)
T ss_dssp             ECHHHHHHHHHHHTTTCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGGTSCCGGGTSSHHHHHHHHCTTCCSSSTTHHHHH
T ss_pred             cccHHHHHHHHhhcccccccCccccccchHHHHHHHHhCCcccccccccccchhhhhHHHHHHHHHHhcccchhhhhhhH
Confidence            432111    00     00      00                             0000                   0


Q ss_pred             HHHHhhhhH-------HHHHhc-------------CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCe
Q psy9582         224 LPAISRRGE-------EIISIR-------------GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDI  281 (329)
Q Consensus       224 ~~~v~~~~~-------~i~~~k-------------g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~  281 (329)
                      .+.++....       ++.+..             +...++-.   ++ .++++|.+|+ .++.++|.++|. -++|+|+
T Consensus       303 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~---a~-~ii~AI~~~~~~~~~vNv~N~G~I~nLP~Da  378 (477)
T 3u95_A          303 HEHLRRARERLIKLAEEVQENPHLKITEKHPEIFPKGRLSGEQ---HI-PFINAIANNKRVRLFLNVENQGALKDFPDDL  378 (477)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCCHHHHCTTTSCSSCCCCCS---HH-HHHHHHHHCCCEEEEEEEECTTSSTTSCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhccchhcccccchhcccccccHHH---HH-HHHHHHhCCCCeEEEEEeecCcccCCCCCCc
Confidence            111111111       111100             00001111   23 7899999998 999999999998 6899999


Q ss_pred             EEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582         282 IFGFPVKI-KNSKYKIIQNLEIDKFSRKKI  310 (329)
Q Consensus       282 ~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l  310 (329)
                      ++++||++ ++|+.++.- .++++...+++
T Consensus       379 vVEVpc~Vd~~Gi~P~~v-g~~p~~~~~l~  407 (477)
T 3u95_A          379 VMELPVWVDSSGIHREKV-EPDLTHRIKIF  407 (477)
T ss_dssp             EEEEEEEEETTEEEECCC-CSCCCHHHHHH
T ss_pred             EEEEEEEEcCCCcccccC-CCCCHHHHHHH
Confidence            99999999 999998765 67877776664

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=99.02  E-value=3.1e-10  Score=104.28  Aligned_cols=145  Identities=14%  Similarity=0.078  Sum_probs=99.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh----Hhhhh---hcc--c-C-----Cccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV----IMEIE---DCI--F-P-----LLVD   70 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~----~~dl~---~~~--~-~-----~~~~   70 (329)
                      .||+|||| |.+|+.+|..++..|+       +|+|+|++    ++.++.-    ...+.   +..  . .     .+..
T Consensus         7 ~~VaViGa-G~MG~giA~~~a~~G~-------~V~l~D~~----~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~   74 (319)
T 3ado_A            7 GDVLIVGS-GLVGRSWAMLFASGGF-------RVKLYDIE----PRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSL   74 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSC----HHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHT
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC-------eEEEEECC----HHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhh
Confidence            69999999 9999999999999998       89999998    3333221    11111   110  0 1     1246


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC--
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP--  148 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~--  148 (329)
                      ++.++++.+++++||+||.+.              .+|.++.+++.+++.++|+|+++  +.||.+.+...-+...++  
T Consensus        75 i~~~~~l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~aI--laSNTSsl~is~ia~~~~~p  138 (319)
T 3ado_A           75 ISSCTNLAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRVV--LSSSSSCLLPSKLFTGLAHV  138 (319)
T ss_dssp             EEEECCHHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSSE--EEECCSSCCHHHHHTTCTTG
T ss_pred             cccccchHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcce--eehhhhhccchhhhhhccCC
Confidence            888888888999999999972              45778999999999999988886  689988765544444331  


Q ss_pred             -------CCCC-C--c---EEEe--chhHHHHHHHHHHHHhCCCC
Q psy9582         149 -------DLSY-K--N---FTAM--LRLDHNRAIAKLASKLNEPV  178 (329)
Q Consensus       149 -------~~~~-~--~---i~~~--t~lds~r~~~~la~~l~~~~  178 (329)
                             -|+| .  +   |+.+  |.-++......+++.+|..|
T Consensus       139 ~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~p  183 (319)
T 3ado_A          139 KQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSP  183 (319)
T ss_dssp             GGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred             CcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCcc
Confidence                   0211 1  1   2222  55555555666777777443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.85  E-value=7.8e-09  Score=93.62  Aligned_cols=106  Identities=16%  Similarity=0.178  Sum_probs=74.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc----------cc-----
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC----------IF-----   65 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~----------~~-----   65 (329)
                      ||. .+||+|||+ |.+|+.+|..++..|+       +|+++|++    +++++.....+.+.          ..     
T Consensus         1 Mm~-~~kV~VIGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~   67 (283)
T 4e12_A            1 MTG-ITNVTVLGT-GVLGSQIAFQTAFHGF-------AVTAYDIN----TDALDAAKKRFEGLAAVYEKEVAGAADGAAQ   67 (283)
T ss_dssp             CCS-CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHH
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHhcccCCHHHHH
Confidence            554 479999998 9999999999999997       99999999    55444322221110          00     


Q ss_pred             CCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          66 PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        66 ~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ....+++.+++..+++++||+||++..              .+.+..+++.+.+.++++|+++++..|
T Consensus        68 ~~~~~i~~~~~~~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~il~s~t  121 (283)
T 4e12_A           68 KALGGIRYSDDLAQAVKDADLVIEAVP--------------ESLDLKRDIYTKLGELAPAKTIFATNS  121 (283)
T ss_dssp             HHHHHCEEESCHHHHTTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             HHHcCeEEeCCHHHHhccCCEEEEecc--------------CcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            011346677887788999999999842              123566777778888887888765444

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=98.82  E-value=1.6e-08  Score=94.55  Aligned_cols=117  Identities=11%  Similarity=0.110  Sum_probs=83.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc----ccCCccceEeecCcc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC----IFPLLVDVSVHENPI   78 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~----~~~~~~~i~~~~~~~   78 (329)
                      ++.+||+|||+ |.+|.+++..|+..|.       +|.+||++    +++++.....-...    ...+..++..+++..
T Consensus        27 ~~~mkI~VIGa-G~mG~alA~~La~~G~-------~V~l~~r~----~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~   94 (356)
T 3k96_A           27 PFKHPIAILGA-GSWGTALALVLARKGQ-------KVRLWSYE----SDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLK   94 (356)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHTTTC-------CEEEECSC----HHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHH
T ss_pred             ccCCeEEEECc-cHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHcCCCcccCCCCccCCCeEEECCHH
Confidence            34589999999 9999999999999887       89999998    44444322111000    001224578888888


Q ss_pred             cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh----hHHHHHHHHC
Q psy9582          79 TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN----TNTYITMKSA  147 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~----~~~~~~~~~~  147 (329)
                      +++++||+||++.  |.              ..++++++.+..+.+++.+++.++|-.+    .+...+.+..
T Consensus        95 ea~~~aDvVilaV--p~--------------~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l  151 (356)
T 3k96_A           95 ASLEGVTDILIVV--PS--------------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL  151 (356)
T ss_dssp             HHHTTCCEEEECC--CH--------------HHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHH
T ss_pred             HHHhcCCEEEECC--CH--------------HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHc
Confidence            8999999999973  21              3677888889888877888888888543    3445666654

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.72  E-value=5.8e-08  Score=93.96  Aligned_cols=115  Identities=12%  Similarity=0.096  Sum_probs=77.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--------------
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--------------   67 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--------------   67 (329)
                      ++.+||+|||+ |.||..+|..|+.. |+.      +|+++|++    +++..+.+..+.....+.              
T Consensus        16 ~~~mkIaVIGl-G~mG~~lA~~la~~~G~~------~V~~~D~~----~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~   84 (478)
T 3g79_A           16 GPIKKIGVLGM-GYVGIPAAVLFADAPCFE------KVLGFQRN----SKSSGYKIEMLNRGESPLKGEEPGLEELIGKV   84 (478)
T ss_dssp             CSCCEEEEECC-STTHHHHHHHHHHSTTCC------EEEEECCC----CTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHhCCCC------eEEEEECC----hhHhHHHHHHHHhcCCCccccCCCHHHHHHhh
Confidence            34579999999 99999999999998 752      69999999    441111222222211011              


Q ss_pred             --ccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          68 --LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        68 --~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        ..+++.+++ .+++++||+||++.+.|.....++    ..++..+++.++.+.++.+++.+||..|
T Consensus        85 ~~~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~S  147 (478)
T 3g79_A           85 VKAGKFECTPD-FSRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLES  147 (478)
T ss_dssp             HHTTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             cccCCeEEeCc-HHHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence              246888888 789999999999987776433210    1233556666777777766777776665

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.70  E-value=4.5e-08  Score=94.36  Aligned_cols=110  Identities=13%  Similarity=0.157  Sum_probs=78.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~~   75 (329)
                      |||+|||+ |.||.++|..|+..|.       +|+++|++    +++++...........+.          ..+++.++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~-------~V~~~D~~----~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~   70 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGA-------NVRCIDTD----RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGT   70 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEES
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCC-------EEEEEECC----HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEEC
Confidence            69999998 9999999999999987       99999999    555543322111000000          13578888


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +..+++++||+||++.+.|.+++.      ..++..++++++.+.++.+++.+|+..|
T Consensus        71 d~~ea~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~S  122 (450)
T 3gg2_A           71 EIEQAVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKS  122 (450)
T ss_dssp             CHHHHGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred             CHHHHHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence            888889999999999877754332      2344577777788888776777777665

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.70  E-value=2.4e-08  Score=91.09  Aligned_cols=103  Identities=14%  Similarity=0.117  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh-------hcc-c-----------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE-------DCI-F-----------   65 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~-------~~~-~-----------   65 (329)
                      .+||+|||+ |.+|+.+|..|+..|+       +|+++|++    +++++.....+.       ... .           
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~-------~V~~~d~~----~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~   82 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGH-------TVVLVDQT----EDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVE   82 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC----HHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHH
Confidence            368999999 9999999999999987       89999999    444442111110       000 0           


Q ss_pred             CCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          66 PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        66 ~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ....+++.+++..+++++||+||++.  |            .+..+.+++.+.+.++++|+++|+..|
T Consensus        83 ~~~~~i~~~~~~~~~~~~aD~Vi~av--p------------~~~~~~~~v~~~l~~~~~~~~iv~s~t  136 (302)
T 1f0y_A           83 KTLSTIATSTDAASVVHSTDLVVEAI--V------------ENLKVKNELFKRLDKFAAEHTIFASNT  136 (302)
T ss_dssp             HHHHTEEEESCHHHHTTSCSEEEECC--C------------SCHHHHHHHHHHHTTTSCTTCEEEECC
T ss_pred             HHHhceEEecCHHHhhcCCCEEEEcC--c------------CcHHHHHHHHHHHHhhCCCCeEEEECC
Confidence            00125777788777999999999984  2            123455677778888876787654333

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=98.64  E-value=9.8e-08  Score=97.00  Aligned_cols=144  Identities=10%  Similarity=0.085  Sum_probs=96.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh----Hhhhhh-------c-ccCCccceEe
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV----IMEIED-------C-IFPLLVDVSV   73 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~----~~dl~~-------~-~~~~~~~i~~   73 (329)
                      .||+|||| |.+|+.+|..++..|+       +|+|+|++    ++.++.-    ...+..       . .......++.
T Consensus       317 ~~v~ViGa-G~MG~gIA~~~a~aG~-------~V~l~D~~----~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~  384 (742)
T 3zwc_A          317 SSVGVLGL-GTMGRGIAISFARVGI-------SVVAVESD----PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF  384 (742)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSS----HHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCC-------chhcccch----HhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc
Confidence            69999999 9999999999999998       99999998    3333211    111110       0 0012245667


Q ss_pred             ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC-----
Q psy9582          74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP-----  148 (329)
Q Consensus        74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~-----  148 (329)
                      +++ ++++++||+||.+.              .+|.++.+++.++++++++|+++  +.||.+.+-...+.+.+.     
T Consensus       385 ~~~-~~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~aI--lASNTSsl~i~~ia~~~~~p~r~  447 (742)
T 3zwc_A          385 SSS-TKELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGAF--LCTNTSALNVDDIASSTDRPQLV  447 (742)
T ss_dssp             ESC-GGGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTCE--EEECCSSSCHHHHHTTSSCGGGE
T ss_pred             cCc-HHHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCce--EEecCCcCChHHHHhhcCCcccc
Confidence            666 67899999999972              45778999999999999988986  689987764444443331     


Q ss_pred             ----CCCC-C--c---EEEe--chhHHHHHHHHHHHHhCCCC
Q psy9582         149 ----DLSY-K--N---FTAM--LRLDHNRAIAKLASKLNEPV  178 (329)
Q Consensus       149 ----~~~~-~--~---i~~~--t~lds~r~~~~la~~l~~~~  178 (329)
                          -|+| .  +   |+.+  |.-++......+++++|..|
T Consensus       448 ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~p  489 (742)
T 3zwc_A          448 IGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIG  489 (742)
T ss_dssp             EEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEE
T ss_pred             ccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCC
Confidence                1111 1  1   2222  55566556667778888543

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=98.63  E-value=6.2e-08  Score=91.20  Aligned_cols=127  Identities=15%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCC-CceEEEEecCCcccccchhhhHhhhhhcccC------CccceEeec
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQ-PIILQLLEASNKKSQKAIKGVIMEIEDCIFP------LLVDVSVHE   75 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~------~~~~i~~~~   75 (329)
                      .+|.||+|+|| |.+|+++|..|..++.--.+. ..+|.||.++++...+.+. ..+.-.|....      +..++++++
T Consensus        32 ~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~-e~in~~~~N~~YLpgv~Lp~~i~~t~  109 (391)
T 4fgw_A           32 EKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLT-EIINTRHQNVKYLPGITLPDNLVANP  109 (391)
T ss_dssp             -CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHH-HHHTTTCCBTTTBTTCCCCSSEEEES
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHH-HHHHhcCcCcccCCCCcCCCCcEEeC
Confidence            45679999999 999999999999864300000 0169999887211111111 11222232212      236899999


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC-------chhhHHHHHHHHC
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN-------PVNTNTYITMKSA  147 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN-------P~~~~~~~~~~~~  147 (329)
                      |+.+++++||+||++  +|.              +.+++++++++.+.+++..+|.++-       ....+..++.+..
T Consensus       110 dl~~al~~ad~ii~a--vPs--------------~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~  172 (391)
T 4fgw_A          110 DLIDSVKDVDIIVFN--IPH--------------QFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEEL  172 (391)
T ss_dssp             CHHHHHTTCSEEEEC--SCG--------------GGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHH
T ss_pred             CHHHHHhcCCEEEEE--CCh--------------hhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHh
Confidence            999999999999997  333              5788889999988767888887762       2346777777765

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.61  E-value=7.9e-08  Score=93.44  Aligned_cols=121  Identities=14%  Similarity=0.105  Sum_probs=79.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---------ccceEe
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---------LVDVSV   73 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---------~~~i~~   73 (329)
                      .+||+|||+ |.||..+|..|++.  +.       +|+++|++    +++++...........+.         ...++.
T Consensus         9 ~mkI~VIG~-G~vG~~~A~~La~~g~g~-------~V~~~D~~----~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~   76 (481)
T 2o3j_A            9 VSKVVCVGA-GYVGGPTCAMIAHKCPHI-------TVTVVDMN----TAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF   76 (481)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHCTTS-------EEEEECSC----HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCC-------EEEEEECC----HHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE
Confidence            369999998 99999999999987  55       89999998    555543321100000000         124777


Q ss_pred             ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhh
Q psy9582          74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNT  138 (329)
Q Consensus        74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~  138 (329)
                      +++..+++++||+||++.+.|.+.+.++.+ -..++..+++.++.+.++.+++.+|+.. |+|.+.
T Consensus        77 t~~~~~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt  141 (481)
T 2o3j_A           77 SSDIPKAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKA  141 (481)
T ss_dssp             ESCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred             ECCHHHHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCH
Confidence            888778899999999998777643322111 0122345667777787777667766654 677654

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.61  E-value=9.3e-08  Score=92.82  Aligned_cols=111  Identities=10%  Similarity=0.053  Sum_probs=78.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEee
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVH   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~   74 (329)
                      +|||+|||+ |.||..+|..|++.|.       +|+++|++    +++++...........+.          ..+++.+
T Consensus         8 ~~~I~VIG~-G~vG~~lA~~la~~G~-------~V~~~d~~----~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t   75 (478)
T 2y0c_A            8 SMNLTIIGS-GSVGLVTGACLADIGH-------DVFCLDVD----QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS   75 (478)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred             CceEEEECc-CHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE
Confidence            589999998 9999999999999987       99999998    555543321110000010          1257888


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++..+++++||+||++...|.+.+.+      -+...++++++.+.++.+++++|++.|
T Consensus        76 td~~~a~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~iVV~~S  128 (478)
T 2y0c_A           76 TDIEAAVAHGDVQFIAVGTPPDEDGS------ADLQYVLAAARNIGRYMTGFKVIVDKS  128 (478)
T ss_dssp             CCHHHHHHHCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred             CCHHHHhhcCCEEEEEeCCCcccCCC------ccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            88778899999999997776543221      234567777788888776787776665

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.60  E-value=1.8e-07  Score=89.80  Aligned_cols=115  Identities=17%  Similarity=0.100  Sum_probs=75.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~~   75 (329)
                      |||+|||+ |.||..+|..|++.|.       +|+++|++    +++++...........+.          ..+++.++
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~-------~V~~~d~~----~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~   68 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGH-------EVIGVDVS----STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTT   68 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeC
Confidence            48999998 9999999999999887       89999998    555543221100000000          12477788


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCC---CeEEEEE-cCchhh
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR---DVKVLVV-GNPVNT  138 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p---~a~viv~-tNP~~~  138 (329)
                      +..+++++||+||++.+.|......      .+...+++.++.+.++.++   +.+|+.. |+|.+.
T Consensus        69 ~~~~~~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~  129 (436)
T 1mv8_A           69 DFKKAVLDSDVSFICVGTPSKKNGD------LDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT  129 (436)
T ss_dssp             CHHHHHHTCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred             CHHHHhccCCEEEEEcCCCcccCCC------cchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence            8777899999999997766532211      1223455555666655545   6676665 677655

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=98.59  E-value=9.5e-08  Score=92.79  Aligned_cols=103  Identities=17%  Similarity=0.118  Sum_probs=70.9

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh----cc-cC---------
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED----CI-FP---------   66 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~----~~-~~---------   66 (329)
                      |+++.+||+|||+ |.||+.+|..|+..|+       +|+++|++    +++++.....+..    .. ..         
T Consensus         1 Msm~~~kVgVIGa-G~MG~~IA~~la~aG~-------~V~l~D~~----~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~   68 (483)
T 3mog_A            1 MSLNVQTVAVIGS-GTMGAGIAEVAASHGH-------QVLLYDIS----AEALTRAIDGIHARLNSRVTRGKLTAETCER   68 (483)
T ss_dssp             ---CCCCEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSC----HHHHHHHHHHHHHHHHTTTTTTSSCHHHHHH
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCC-------eEEEEECC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence            4334579999999 9999999999999997       89999999    5555432221111    00 00         


Q ss_pred             CccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEE
Q psy9582          67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVL  130 (329)
Q Consensus        67 ~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~vi  130 (329)
                      ...+++.+++. +++++||+||.+.  +            .+..+.+++.+.+.++++|+++++
T Consensus        69 ~~~~i~~~~~~-~~~~~aDlVIeAV--p------------e~~~vk~~v~~~l~~~~~~~~Ila  117 (483)
T 3mog_A           69 TLKRLIPVTDI-HALAAADLVIEAA--S------------ERLEVKKALFAQLAEVCPPQTLLT  117 (483)
T ss_dssp             HHHTEEEECCG-GGGGGCSEEEECC--C------------CCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             HHhceeEeCCH-HHhcCCCEEEEcC--C------------CcHHHHHHHHHHHHHhhccCcEEE
Confidence            11357777775 6899999999983  2            234566778888888887787653

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=98.59  E-value=1.4e-07  Score=90.72  Aligned_cols=102  Identities=9%  Similarity=0.086  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH-hhhh---hcc-------cCCccceEee
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI-MEIE---DCI-------FPLLVDVSVH   74 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~-~dl~---~~~-------~~~~~~i~~~   74 (329)
                      +||+|||+ |.||+.+|..|+..|+       +|+++|++    +++..... ..+.   ...       .....+++.+
T Consensus        55 ~kVaVIGa-G~MG~~IA~~la~aG~-------~V~l~D~~----~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t  122 (460)
T 3k6j_A           55 NSVAIIGG-GTMGKAMAICFGLAGI-------ETFLVVRN----EQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT  122 (460)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEECc----HHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe
Confidence            69999999 9999999999999998       99999999    33221111 0111   100       0112467788


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ++. +++++||+||.+..              .+..+.+++.+.+.++++|+++++  ||.+
T Consensus       123 ~dl-~al~~aDlVIeAVp--------------e~~~vk~~v~~~l~~~~~~~aIla--snTS  167 (460)
T 3k6j_A          123 SDF-HKLSNCDLIVESVI--------------EDMKLKKELFANLENICKSTCIFG--TNTS  167 (460)
T ss_dssp             SCG-GGCTTCSEEEECCC--------------SCHHHHHHHHHHHHTTSCTTCEEE--ECCS
T ss_pred             CCH-HHHccCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCCEEE--ecCC
Confidence            876 68999999999832              244677788888999988888754  4443

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=98.55  E-value=1.4e-07  Score=91.36  Aligned_cols=124  Identities=15%  Similarity=0.100  Sum_probs=78.9

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----C-----ccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----L-----LVD   70 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----~-----~~~   70 (329)
                      |++.+||+|||+ |.||..+|..|+..  |.       +|+++|++    +++++...........+    .     ...
T Consensus         2 M~~~mkI~VIG~-G~mG~~lA~~La~~g~G~-------~V~~~d~~----~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~   69 (467)
T 2q3e_A            2 MFEIKKICCIGA-GYVGGPTCSVIAHMCPEI-------RVTVVDVN----ESRINAWNSPTLPIYEPGLKEVVESCRGKN   69 (467)
T ss_dssp             CCCCCEEEEECC-STTHHHHHHHHHHHCTTS-------EEEEECSC----HHHHHHHTSSSCSSCCTTHHHHHHHHBTTT
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHhcCCCC-------EEEEEECC----HHHHHHHhCCCCCcCCCCHHHHHHHhhcCC
Confidence            555589999998 99999999999987  55       89999998    55444321100000000    0     024


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhh
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNT  138 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~  138 (329)
                      ++.+++..+++++||+||++.+.|........+ -..+...+.+.++.+.++.+++++|+.. |+|...
T Consensus        70 ~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~  137 (467)
T 2q3e_A           70 LFFSTNIDDAIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRA  137 (467)
T ss_dssp             EEEESCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTH
T ss_pred             EEEECCHHHHHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchH
Confidence            677788778899999999997665432110000 0123345667777777776567777665 567654

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=98.54  E-value=2.1e-07  Score=88.87  Aligned_cols=122  Identities=15%  Similarity=0.212  Sum_probs=76.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh--------hhcccCCccceEeecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI--------EDCIFPLLVDVSVHEN   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl--------~~~~~~~~~~i~~~~~   76 (329)
                      .+||+|||+ |.||.++|..|++ |.       +|+++|++    +++++......        .+.......+++.+++
T Consensus        36 ~mkIaVIGl-G~mG~~lA~~La~-G~-------~V~~~D~~----~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd  102 (432)
T 3pid_A           36 FMKITISGT-GYVGLSNGVLIAQ-NH-------EVVALDIV----QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTD  102 (432)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHT-TS-------EEEEECSC----HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHc-CC-------eEEEEecC----HHHhhHHhccCCccccccHHHHHhhccCCeEEEcC
Confidence            379999998 9999999999987 76       89999999    55554332110        0000000125788888


Q ss_pred             cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHHHH
Q psy9582          77 PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYITMK  145 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~~~  145 (329)
                      ..+++++||+||++...+..+...     .-++..+++.++.+.+ .+|+++||..| -|.+..-.+..+
T Consensus       103 ~~ea~~~aDvViiaVPt~~~~~~~-----~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~  166 (432)
T 3pid_A          103 KHDAYRNADYVIIATPTDYDPKTN-----YFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKER  166 (432)
T ss_dssp             HHHHHTTCSEEEECCCCEEETTTT-----EEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHH
T ss_pred             HHHHHhCCCEEEEeCCCccccccc-----cccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHH
Confidence            889999999999985443211110     0122345555555655 35777776654 676655554443

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=98.52  E-value=3e-07  Score=88.32  Aligned_cols=124  Identities=14%  Similarity=0.147  Sum_probs=84.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEee
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVH   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~   74 (329)
                      +.+|+|||+ |.||.++|..|++.|+       +|++||++    +++++...........+.          ..+++.+
T Consensus         8 ~~~~~vIGl-G~vG~~~A~~La~~G~-------~V~~~D~~----~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t   75 (446)
T 4a7p_A            8 SVRIAMIGT-GYVGLVSGACFSDFGH-------EVVCVDKD----ARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT   75 (446)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----STTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred             ceEEEEEcC-CHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE
Confidence            579999998 9999999999999988       99999999    555543321110000010          1357888


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchh---hHHHHHHH
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVN---TNTYITMK  145 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~---~~~~~~~~  145 (329)
                      ++..+++++||+||++.+.|...+..     .-++..+++.++.+.++.+++.+||..| -|.+   .+...+.+
T Consensus        76 td~~ea~~~aDvvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e  145 (446)
T 4a7p_A           76 TDLAEGVKDADAVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAE  145 (446)
T ss_dssp             SCHHHHHTTCSEEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred             CCHHHHHhcCCEEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence            99888999999999998777542100     1233567777778887776777777765 3443   34444444

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=98.50  E-value=1.1e-07  Score=90.38  Aligned_cols=121  Identities=12%  Similarity=0.176  Sum_probs=77.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--------CCccceEeecCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--------PLLVDVSVHENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--------~~~~~i~~~~~~   77 (329)
                      |||+|||+ |.||..++..|++ |.       +|+++|++    +++++...........        ....++..+++.
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~-------~V~~~d~~----~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~   67 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QN-------EVTIVDIL----PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDS   67 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TS-------EEEEECSC----HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CC-------EEEEEECC----HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCH
Confidence            48999999 9999999999998 75       89999998    5544432211100000        001245677776


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEE-EcCchhhHHHHHHH
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLV-VGNPVNTNTYITMK  145 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv-~tNP~~~~~~~~~~  145 (329)
                      .+++++||+||++...+...+..+.     ++..+.++++.+.+ .+++.+|+. .|||.+....+...
T Consensus        68 ~~~~~~aDvviiavpt~~~~~~~~~-----dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~  130 (402)
T 1dlj_A           68 KAAYKEAELVIIATPTNYNSRINYF-----DTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQK  130 (402)
T ss_dssp             HHHHHHCSEEEECCCCCEETTTTEE-----CCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHH
T ss_pred             HHHhcCCCEEEEecCCCcccCCCCc-----cHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHH
Confidence            6789999999998665532111111     12345555566665 457777776 68999876665544

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=98.47  E-value=3.2e-07  Score=88.69  Aligned_cols=105  Identities=10%  Similarity=0.084  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh--------hc-ccC---CccceE
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE--------DC-IFP---LLVDVS   72 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~--------~~-~~~---~~~~i~   72 (329)
                      .+||+|||+ |.||+.+|..|+..|+       +|+++|++    ++.++.....+.        .. ..+   ......
T Consensus        37 ~~kV~VIGa-G~MG~~iA~~la~~G~-------~V~l~D~~----~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~  104 (463)
T 1zcj_A           37 VSSVGVLGL-GTMGRGIAISFARVGI-------SVVAVESD----PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR  104 (463)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSS----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEECC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhh
Confidence            368999999 9999999999999987       89999998    444432211110        00 000   011234


Q ss_pred             eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++++. +++++||+||++..              .+..+.+++.+.+..+++|+++|+  +|...+
T Consensus       105 i~~~~-~~~~~aDlVIeaVp--------------e~~~~k~~v~~~l~~~~~~~~ii~--snTs~~  153 (463)
T 1zcj_A          105 FSSST-KELSTVDLVVEAVF--------------EDMNLKKKVFAELSALCKPGAFLC--TNTSAL  153 (463)
T ss_dssp             EESCG-GGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEEE--ECCSSS
T ss_pred             hcCCH-HHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeEEE--eCCCCc
Confidence            56665 78999999999842              234566777778888887787764  466554

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=98.45  E-value=4.2e-07  Score=92.51  Aligned_cols=104  Identities=15%  Similarity=0.129  Sum_probs=72.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh-------cc-------cCCccce
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED-------CI-------FPLLVDV   71 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~-------~~-------~~~~~~i   71 (329)
                      +||+|||+ |.||+.+|..++..|+       +|+++|++    ++.++.....+.+       ..       .....++
T Consensus       313 ~kV~VIGa-G~MG~~iA~~la~aG~-------~V~l~D~~----~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i  380 (725)
T 2wtb_A          313 KKVAIIGG-GLMGSGIATALILSNY-------PVILKEVN----EKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLL  380 (725)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTC-------CEEEECSS----HHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSE
T ss_pred             cEEEEEcC-CHhhHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcce
Confidence            58999999 9999999999999987       89999999    4444321111100       00       0122467


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      +.+++. +++++||+||++.  +            .+..+.+++...+.++++|++++  +||...+
T Consensus       381 ~~~~d~-~~~~~aDlVIeaV--p------------e~~~vk~~v~~~l~~~~~~~~Il--asntStl  430 (725)
T 2wtb_A          381 KGSLDY-ESFRDVDMVIEAV--I------------ENISLKQQIFADLEKYCPQHCIL--ASNTSTI  430 (725)
T ss_dssp             EEESSS-GGGTTCSEEEECC--C------------SCHHHHHHHHHHHHHHSCTTCEE--EECCSSS
T ss_pred             EEeCCH-HHHCCCCEEEEcC--c------------CCHHHHHHHHHHHHhhCCCCcEE--EeCCCCC
Confidence            777775 7999999999983  2            23456777778888888778754  5665443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.45  E-value=1.4e-07  Score=81.63  Aligned_cols=111  Identities=16%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||.|+||+|++|++++..|++.|.       +|++++++    .+++......+.-    ...++.-..+..+++
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~----~~~Dl~d~~~~~~~~   65 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRGF-------EVTAVVRH----PEKIKIENEHLKV----KKADVSSLDEVCEVC   65 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTTC-------EEEEECSC----GGGCCCCCTTEEE----ECCCTTCHHHHHHHH
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEEcC----cccchhccCceEE----EEecCCCHHHHHHHh
Confidence            44557999999999999999999999886       89999998    3332211000000    001111112345678


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +++|+||+++|....    ..+.+..|+...+.+++.+.+.. .. .+|.+|
T Consensus        66 ~~~d~vi~~a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S  111 (227)
T 3dhn_A           66 KGADAVISAFNPGWN----NPDIYDETIKVYLTIIDGVKKAG-VN-RFLMVG  111 (227)
T ss_dssp             TTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTT-CS-EEEEEC
T ss_pred             cCCCEEEEeCcCCCC----ChhHHHHHHHHHHHHHHHHHHhC-CC-EEEEeC
Confidence            899999999875421    11245678889999999998863 44 455554

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.44  E-value=2.6e-06  Score=74.19  Aligned_cols=111  Identities=10%  Similarity=0.102  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.+||.|+||+|++|++++..|++.|.       +|++++++    .+++..... . ........++.  .+..+++++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-------~V~~~~R~----~~~~~~~~~-~-~~~~~~~~Dl~--~~~~~~~~~   84 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-------EPVAMVRN----EEQGPELRE-R-GASDIVVANLE--EDFSHAFAS   84 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----GGGHHHHHH-T-TCSEEEECCTT--SCCGGGGTT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-------eEEEEECC----hHHHHHHHh-C-CCceEEEcccH--HHHHHHHcC
Confidence            357999999999999999999999987       89999998    444432111 0 00000011222  456788999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|+||+++|....  .+....+..|+.....+++.+++.. .. .||++|
T Consensus        85 ~D~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~iv~~S  130 (236)
T 3e8x_A           85 IDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG-IK-RFIMVS  130 (236)
T ss_dssp             CSEEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHT-CC-EEEEEC
T ss_pred             CCEEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence            9999999886542  3466677889999999999998863 33 555554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=98.43  E-value=8.4e-07  Score=80.67  Aligned_cols=95  Identities=9%  Similarity=0.108  Sum_probs=66.3

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++.+||+|||+ |.+|..++..|+..|+       +|++||++    .++++..    .+.      .++.+++..+++
T Consensus        12 M~~~~~I~vIG~-G~mG~~~A~~l~~~G~-------~V~~~dr~----~~~~~~~----~~~------g~~~~~~~~~~~   69 (296)
T 3qha_A           12 TTEQLKLGYIGL-GNMGAPMATRMTEWPG-------GVTVYDIR----IEAMTPL----AEA------GATLADSVADVA   69 (296)
T ss_dssp             ---CCCEEEECC-STTHHHHHHHHTTSTT-------CEEEECSS----TTTSHHH----HHT------TCEECSSHHHHT
T ss_pred             ccCCCeEEEECc-CHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHH----HHC------CCEEcCCHHHHH
Confidence            444579999998 9999999999999887       89999999    4444422    221      244556777788


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      + ||+||++...+               ..++++.+.+.+...++.+|+..|+
T Consensus        70 ~-aDvvi~~vp~~---------------~~~~~v~~~l~~~l~~g~ivv~~st  106 (296)
T 3qha_A           70 A-ADLIHITVLDD---------------AQVREVVGELAGHAKPGTVIAIHST  106 (296)
T ss_dssp             T-SSEEEECCSSH---------------HHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred             h-CCEEEEECCCh---------------HHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            8 99999984221               2345555666666667778777765

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=98.43  E-value=1.2e-07  Score=82.43  Aligned_cols=94  Identities=17%  Similarity=0.198  Sum_probs=66.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEE-EecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQL-LEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L-~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .+||+|||+ |.+|.+++..|...+.       +|.+ +|++    .++++....++.         +..+.+..+++++
T Consensus        23 mmkI~IIG~-G~mG~~la~~l~~~g~-------~V~~v~~r~----~~~~~~l~~~~g---------~~~~~~~~~~~~~   81 (220)
T 4huj_A           23 MTTYAIIGA-GAIGSALAERFTAAQI-------PAIIANSRG----PASLSSVTDRFG---------ASVKAVELKDALQ   81 (220)
T ss_dssp             SCCEEEEEC-HHHHHHHHHHHHHTTC-------CEEEECTTC----GGGGHHHHHHHT---------TTEEECCHHHHTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEECCC----HHHHHHHHHHhC---------CCcccChHHHHhc
Confidence            478999998 9999999999999887       7888 9998    555554332221         1122344677899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +|+||++.  |.              ..+.++++.+.. . ++.+|+.++||..
T Consensus        82 aDvVilav--p~--------------~~~~~v~~~l~~-~-~~~ivi~~~~g~~  117 (220)
T 4huj_A           82 ADVVILAV--PY--------------DSIADIVTQVSD-W-GGQIVVDASNAID  117 (220)
T ss_dssp             SSEEEEES--CG--------------GGHHHHHTTCSC-C-TTCEEEECCCCBC
T ss_pred             CCEEEEeC--Ch--------------HHHHHHHHHhhc-c-CCCEEEEcCCCCC
Confidence            99999984  21              244555666655 3 5778899999985

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=98.42  E-value=6.8e-07  Score=83.96  Aligned_cols=121  Identities=13%  Similarity=0.114  Sum_probs=76.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc-----chhhhHhhhhhc----ccCCccceEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK-----AIKGVIMEIEDC----IFPLLVDVSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~-----~~~~~~~dl~~~----~~~~~~~i~~~~~   76 (329)
                      +||+|||+ |.+|++++..|+..|.....-..+|+++|++    ++     +++.........    ......++..+++
T Consensus        22 ~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~~~~r~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~   96 (375)
T 1yj8_A           22 LKISILGS-GNWASAISKVVGTNAKNNYLFENEVRMWIRD----EFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD   96 (375)
T ss_dssp             BCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEEEECCS----CC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEEEEECC----hhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence            47999998 9999999999998771000000089999998    33     333221110000    0011135777777


Q ss_pred             cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----hcCCCeEEEEEcCch-------hhHHHHHHH
Q psy9582          77 PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS----VASRDVKVLVVGNPV-------NTNTYITMK  145 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~----~~~p~a~viv~tNP~-------~~~~~~~~~  145 (329)
                      ..+++++||+||++.  |.              ..++++++.+..    +..++.+++.++|..       ..+...+.+
T Consensus        97 ~~ea~~~aDvVilav--~~--------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~  160 (375)
T 1yj8_A           97 LASVINDADLLIFIV--PC--------------QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD  160 (375)
T ss_dssp             THHHHTTCSEEEECC--CH--------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH
T ss_pred             HHHHHcCCCEEEEcC--CH--------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH
Confidence            778899999999983  11              356777778877    666788888888743       235555555


Q ss_pred             HC
Q psy9582         146 SA  147 (329)
Q Consensus       146 ~~  147 (329)
                      ..
T Consensus       161 ~~  162 (375)
T 1yj8_A          161 FL  162 (375)
T ss_dssp             HS
T ss_pred             Hc
Confidence            44

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.40  E-value=5.7e-07  Score=82.66  Aligned_cols=120  Identities=16%  Similarity=0.141  Sum_probs=76.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----ccceEeecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----LVDVSVHEN   76 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----~~~i~~~~~   76 (329)
                      ||++.++|.|+||+|++|++++..|++.|.       +|+++|++.    +.......++.......    ..++.-..+
T Consensus         1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   69 (341)
T 3enk_A            1 SMSTKGTILVTGGAGYIGSHTAVELLAHGY-------DVVIADNLV----NSKREAIARIEKITGKTPAFHETDVSDERA   69 (341)
T ss_dssp             -CCSSCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECCCS----SSCTHHHHHHHHHHSCCCEEECCCTTCHHH
T ss_pred             CCCCCcEEEEecCCcHHHHHHHHHHHHCCC-------cEEEEecCC----cchHHHHHHHHhhcCCCceEEEeecCCHHH
Confidence            677778999999999999999999999987       899999972    22222222222110000    011111122


Q ss_pred             cccccC--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 PITAFK--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~~~al~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..++++  +.|+||++++.....  .....+.+..|+.....+++.+.+.. .. .||++|
T Consensus        70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~iv~~S  128 (341)
T 3enk_A           70 LARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VK-RIVFSS  128 (341)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             HHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CC-EEEEEe
Confidence            334455  899999998864311  12334567789999999999998863 44 444444

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=98.39  E-value=7.1e-07  Score=80.55  Aligned_cols=98  Identities=12%  Similarity=0.157  Sum_probs=68.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |++|.+++..|...|+-.    .+|.++|++    .++++..    .+.   +  .+..+.+..++++++|
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~----~~V~v~dr~----~~~~~~l----~~~---~--gi~~~~~~~~~~~~aD   65 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDP----NRICVTNRS----LDKLDFF----KEK---C--GVHTTQDNRQGALNAD   65 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCG----GGEEEECSS----SHHHHHH----HHT---T--CCEEESCHHHHHSSCS
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCC----CeEEEEeCC----HHHHHHH----HHH---c--CCEEeCChHHHHhcCC
Confidence            78999999 999999999999987411    279999999    4444422    221   1  2455667788999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-cCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV-ASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~-~~p~a~viv~tNP~~  137 (329)
                      +||++.  +  +            ..++++++.+..+ .+++.+||..++.+.
T Consensus        66 vVilav--~--p------------~~~~~vl~~l~~~~l~~~~iiiS~~agi~  102 (280)
T 3tri_A           66 VVVLAV--K--P------------HQIKMVCEELKDILSETKILVISLAVGVT  102 (280)
T ss_dssp             EEEECS--C--G------------GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred             eEEEEe--C--H------------HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence            999984  1  1            2455666666665 556767776666544

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=98.39  E-value=4.8e-07  Score=83.31  Aligned_cols=102  Identities=10%  Similarity=0.151  Sum_probs=69.2

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc--chhhhHhhhhhcccCCccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK--AIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~--~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      |++.+||+|||+ |.||.+++..|...|...   +.+|+++|++    .+  +++.    +...      .+.++.+..+
T Consensus        19 ~~~~mkI~iIG~-G~mG~ala~~L~~~G~~~---~~~V~v~~r~----~~~~~~~~----l~~~------G~~~~~~~~e   80 (322)
T 2izz_A           19 YFQSMSVGFIGA-GQLAFALAKGFTAAGVLA---AHKIMASSPD----MDLATVSA----LRKM------GVKLTPHNKE   80 (322)
T ss_dssp             ---CCCEEEESC-SHHHHHHHHHHHHTTSSC---GGGEEEECSC----TTSHHHHH----HHHH------TCEEESCHHH
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCCC---cceEEEECCC----ccHHHHHH----HHHc------CCEEeCChHH
Confidence            344579999998 999999999999988421   0179999998    32  3332    2211      2445566678


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +++++|+||++..    +            ..++++++.+.....++.+||.++|...
T Consensus        81 ~~~~aDvVilav~----~------------~~~~~vl~~l~~~l~~~~ivvs~s~gi~  122 (322)
T 2izz_A           81 TVQHSDVLFLAVK----P------------HIIPFILDEIGADIEDRHIVVSCAAGVT  122 (322)
T ss_dssp             HHHHCSEEEECSC----G------------GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred             HhccCCEEEEEeC----H------------HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence            8899999999842    1            2455566677766657888888888654

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=98.37  E-value=7.5e-07  Score=80.88  Aligned_cols=92  Identities=20%  Similarity=0.273  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.||+.+|..|+ .|+       +|++||++    +++++.....+.+   ..+..++.+++.. ++++||
T Consensus        13 ~~V~vIG~-G~MG~~iA~~la-aG~-------~V~v~d~~----~~~~~~~~~~l~~---~~~~~i~~~~~~~-~~~~aD   75 (293)
T 1zej_A           13 MKVFVIGA-GLMGRGIAIAIA-SKH-------EVVLQDVS----EKALEAAREQIPE---ELLSKIEFTTTLE-KVKDCD   75 (293)
T ss_dssp             CEEEEECC-SHHHHHHHHHHH-TTS-------EEEEECSC----HHHHHHHHHHSCG---GGGGGEEEESSCT-TGGGCS
T ss_pred             CeEEEEee-CHHHHHHHHHHH-cCC-------EEEEEECC----HHHHHHHHHHHHH---HHhCCeEEeCCHH-HHcCCC
Confidence            79999999 999999999999 988       99999999    5545422211211   1224577777764 589999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEE
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVL  130 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~vi  130 (329)
                      +||.+..              .+..+.+.+...+...  |++++.
T Consensus        76 lVieavp--------------e~~~vk~~l~~~l~~~--~~~Ila  104 (293)
T 1zej_A           76 IVMEAVF--------------EDLNTKVEVLREVERL--TNAPLC  104 (293)
T ss_dssp             EEEECCC--------------SCHHHHHHHHHHHHTT--CCSCEE
T ss_pred             EEEEcCc--------------CCHHHHHHHHHHHhcC--CCCEEE
Confidence            9999732              2334555666667776  787753

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=98.37  E-value=8.3e-07  Score=82.47  Aligned_cols=110  Identities=15%  Similarity=0.130  Sum_probs=70.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc-----chhhhHhhhhhcc----cCCccceEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK-----AIKGVIMEIEDCI----FPLLVDVSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~-----~~~~~~~dl~~~~----~~~~~~i~~~~~   76 (329)
                      +||+|||+ |.+|++++..|+..|.....-..+|+++|++    ++     +++..........    .....++..+++
T Consensus         9 mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   83 (354)
T 1x0v_A            9 KKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE----EDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPD   83 (354)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCC----CBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcC----hhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcC
Confidence            69999998 9999999999998771000000089999998    33     2322211100000    011234667777


Q ss_pred             cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          77 PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ..+++++||+||++.  |.              ..++++++.+..+.+++++|+.++|-.
T Consensus        84 ~~~~~~~aD~Vilav--~~--------------~~~~~v~~~i~~~l~~~~ivv~~~~Gi  127 (354)
T 1x0v_A           84 VVQAAEDADILIFVV--PH--------------QFIGKICDQLKGHLKANATGISLIKGV  127 (354)
T ss_dssp             HHHHHTTCSEEEECC--CG--------------GGHHHHHHHHTTCSCTTCEEEECCCCB
T ss_pred             HHHHHcCCCEEEEeC--CH--------------HHHHHHHHHHHhhCCCCCEEEEECCcc
Confidence            777899999999983  21              245666777887776788888888844

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.36  E-value=9e-07  Score=81.59  Aligned_cols=107  Identities=15%  Similarity=0.211  Sum_probs=74.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|.|+||+|++|++++..|+..|.       +|+.+|++..  ...+.-...|+.+.           .+..++++++
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~Dl~d~-----------~~~~~~~~~~   78 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQGR-------TVRGFDLRPS--GTGGEEVVGSLEDG-----------QALSDAIMGV   78 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTC-------CEEEEESSCC--SSCCSEEESCTTCH-----------HHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCC-------EEEEEeCCCC--CCCccEEecCcCCH-----------HHHHHHHhCC
Confidence            47999999999999999999999986       8999999821  11111122233221           2345678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||++++............+..|+...+.+++.+.+.. .. .||.+|
T Consensus        79 d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~-~~V~~S  125 (347)
T 4id9_A           79 SAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VR-RFVFAS  125 (347)
T ss_dssp             SEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CS-EEEEEE
T ss_pred             CEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEC
Confidence            999999886543333446778899999999999998863 44 444444

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=98.35  E-value=1.2e-06  Score=83.77  Aligned_cols=119  Identities=14%  Similarity=0.083  Sum_probs=78.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----------CccceEee
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----------LLVDVSVH   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----------~~~~i~~~   74 (329)
                      ..+|+|||. |+||..+|..|+..|.       +|+.+|++    +++.+.+.........+          ...+++++
T Consensus        21 m~~IaViGl-GYVGLp~A~~~A~~G~-------~V~g~Did----~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~t   88 (444)
T 3vtf_A           21 MASLSVLGL-GYVGVVHAVGFALLGH-------RVVGYDVN----PSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFA   88 (444)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC-------EEEEECSC----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCC-------cEEEEECC----HHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEE
Confidence            358999998 9999999999999887       99999999    55554321110000000          01468888


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhh
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNT  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~  138 (329)
                      ++..+++++||++|++.++|.+.+.+-.  +..-....+.+++.++... +..+||+- |-|+..
T Consensus        89 t~~~~ai~~ad~~~I~VpTP~~~d~~~D--l~~v~~a~~~I~~~l~~~~-~g~lVV~eSTVppGt  150 (444)
T 3vtf_A           89 ESAEEAVAATDATFIAVGTPPAPDGSAD--LRYVEAAARAVGRGIRAKG-RWHLVVVKSTVPPGT  150 (444)
T ss_dssp             SSHHHHHHTSSEEEECCCCCBCTTSSBC--CHHHHHHHHHHHHHHHHHC-SCCEEEECSCCCTTT
T ss_pred             cCHHHHHhcCCceEEEecCCCCCCCCCC--cHHHHHHHHHHHHHHhhcC-CCeEEEEeCCCCCch
Confidence            9988999999999999998875543211  1111245566777776543 44455554 456653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=98.35  E-value=1.6e-06  Score=77.36  Aligned_cols=93  Identities=12%  Similarity=0.156  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .+||+|||+ |.+|..++..|...|.       + |.++|++    .++++..    ....     .+..+.+..+++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~-------~~v~~~~~~----~~~~~~~----~~~~-----g~~~~~~~~~~~~~   68 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGF-------RIVQVYSRT----EESAREL----AQKV-----EAEYTTDLAEVNPY   68 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTC-------CEEEEECSS----HHHHHHH----HHHT-----TCEEESCGGGSCSC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCC-------eEEEEEeCC----HHHHHHH----HHHc-----CCceeCCHHHHhcC
Confidence            379999998 9999999999998876       5 8999998    4444322    2110     23445666778899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +|+||++..  .              ...+++++.+.+..+++++++..++
T Consensus        69 ~Dvvi~av~--~--------------~~~~~v~~~l~~~~~~~~ivv~~s~  103 (266)
T 3d1l_A           69 AKLYIVSLK--D--------------SAFAELLQGIVEGKREEALMVHTAG  103 (266)
T ss_dssp             CSEEEECCC--H--------------HHHHHHHHHHHTTCCTTCEEEECCT
T ss_pred             CCEEEEecC--H--------------HHHHHHHHHHHhhcCCCcEEEECCC
Confidence            999999831  1              1235666777766657888888876

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.34  E-value=4.4e-07  Score=83.86  Aligned_cols=175  Identities=13%  Similarity=0.055  Sum_probs=99.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-------ccCC-ccceEee
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-------IFPL-LVDVSVH   74 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-------~~~~-~~~i~~~   74 (329)
                      .++++|.|+||+|++|++++..|+..|.       +|+.++++.    ........++...       .... ..++.-.
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   91 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ-------VVIGLDNFS----TGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL   91 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS----SCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCC----CCchhhhhhhhhccccccCCceEEEEccCCCH
Confidence            3457999999999999999999999886       899999972    2112122222211       0000 0111111


Q ss_pred             cCcccccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH---HHHHHHCCC
Q psy9582          75 ENPITAFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT---YITMKSAPD  149 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~---~~~~~~~~~  149 (329)
                      .+..++++++|+||++++.....  ..+....+..|+.....+++.+.+.. .. .+|.+|-..-.-.   ..+.+.. .
T Consensus        92 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~-~~v~~SS~~vyg~~~~~~~~E~~-~  168 (351)
T 3ruf_A           92 TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQ-SFTYAASSSTYGDHPALPKVEEN-I  168 (351)
T ss_dssp             HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CS-EEEEEEEGGGGTTCCCSSBCTTC-C
T ss_pred             HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEecHHhcCCCCCCCCccCC-C
Confidence            23456788999999998864211  12345567889999999999998874 44 4444432110000   0000011 0


Q ss_pred             CCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         150 LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       150 ~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      ..+....+.+-....++...+++..+++..-++...|+|...
T Consensus       169 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          169 GNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCC
Confidence            111112233444444555666667788777777655677543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.34  E-value=1e-06  Score=75.39  Aligned_cols=114  Identities=16%  Similarity=0.167  Sum_probs=72.6

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |+.+.+||.|+||+|++|++++..|+..+...     +|++++++..+.....+-...|+.+.           .+..++
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~-----~V~~~~r~~~~~~~~~~~~~~D~~~~-----------~~~~~~   64 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLA-----KVIAPARKALAEHPRLDNPVGPLAEL-----------LPQLDG   64 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCC-----EEECCBSSCCCCCTTEECCBSCHHHH-----------GGGCCS
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCC-----eEEEEeCCCcccCCCceEEeccccCH-----------HHHHHh
Confidence            44456799999999999999999999987643     79999988211000011111222211           123334


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +  +|+||++++.......+..+....|+.....+++.+.+.. .. .+|++|-
T Consensus        65 ~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss  114 (215)
T 2a35_A           65 S--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-AR-HYLVVSA  114 (215)
T ss_dssp             C--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CC-EEEEECC
T ss_pred             h--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CC-EEEEECC
Confidence            4  8999999886532223556677889999999999988763 33 4555543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.33  E-value=3.9e-06  Score=76.80  Aligned_cols=118  Identities=10%  Similarity=0.032  Sum_probs=76.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cC--C--ccceEeecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FP--L--LVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~--~--~~~i~~~~~~~   78 (329)
                      +.++|.|+||+|++|++++..|++.|.       +|++++++    ..........+.+.. ..  +  ..++.-..+..
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~   78 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGY-------KVRGTARS----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYD   78 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCC----cccHHHHHHHhhccCCCceEEEEecCCcChHHHH
Confidence            347999999999999999999999887       89999998    333321111111100 00  0  01111112345


Q ss_pred             cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +++++.|+||++++.... +.+....+..|+.....+++.+.+.. .-..+|++|-
T Consensus        79 ~~~~~~d~vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~iv~~SS  132 (342)
T 1y1p_A           79 EVIKGAAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSS  132 (342)
T ss_dssp             TTTTTCSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECC
T ss_pred             HHHcCCCEEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCC-CCcEEEEecc
Confidence            567789999999886532 23556678899999999999887532 2345666654

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=98.30  E-value=6.9e-07  Score=83.52  Aligned_cols=102  Identities=16%  Similarity=0.245  Sum_probs=67.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCcccccC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPITAFK   82 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~~al~   82 (329)
                      ||+|||+ |.+|.+++..|+..|.       +|+++|++    .++++..........    ......+..+++..++++
T Consensus        17 kI~iIG~-G~mG~~la~~L~~~G~-------~V~~~~r~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (366)
T 1evy_A           17 KAVVFGS-GAFGTALAMVLSKKCR-------EVCVWHMN----EEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN   84 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTTEE-------EEEEECSC----HHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHcCcccccccccccccceeeeCCHHHHHc
Confidence            8999999 9999999999998886       89999998    444443221110000    011124667777777899


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHH----HhhhcCC-CeEEEEEcCch
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKA----LNSVASR-DVKVLVVGNPV  136 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~----i~~~~~p-~a~viv~tNP~  136 (329)
                      ++|+||++.  |.              ..++++++.    +..+..+ +.+|+.++|-.
T Consensus        85 ~aDvVilav--~~--------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi  127 (366)
T 1evy_A           85 GAEIILFVI--PT--------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI  127 (366)
T ss_dssp             TCSSEEECC--CH--------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred             CCCEEEECC--Ch--------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence            999999983  11              234455555    5554445 67888888754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.30  E-value=1.7e-06  Score=79.32  Aligned_cols=113  Identities=16%  Similarity=0.111  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
                      .|||.|+||+|++|++++..|+..|.       +|++++++    ......    +.+..... ..++.-..+..+++++
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~----l~~~~~~~~~~Dl~d~~~~~~~~~~   77 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGH-------DLVLIHRP----SSQIQR----LAYLEPECRVAEMLDHAGLERALRG   77 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECT----TSCGGG----GGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEecC----hHhhhh----hccCCeEEEEecCCCHHHHHHHHcC
Confidence            36899999999999999999999886       89999998    332221    11100000 0111111234567889


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +|+||++++..........+.+..|+.....+++.+.+.. .. .+|.+|-
T Consensus        78 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~~v~~SS  126 (342)
T 2x4g_A           78 LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VP-RILYVGS  126 (342)
T ss_dssp             CSEEEEC------------CHHHHHHHHHHHHHHHHHHHT-CS-CEEEECC
T ss_pred             CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEECC
Confidence            9999999886432223445567889999999999998863 33 4555553

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.29  E-value=1.9e-06  Score=78.29  Aligned_cols=162  Identities=12%  Similarity=0.089  Sum_probs=95.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||.|+||+|++|++++..|+..|.       +|+.++++    .....     +.... ....++. ..+..++++++|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~-----~~~~~-~~~~Dl~-~~~~~~~~~~~d   64 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-------TPIILTRS----IGNKA-----INDYE-YRVSDYT-LEDLINQLNDVD   64 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----CC----------CCE-EEECCCC-HHHHHHHTTTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-------EEEEEeCC----CCccc-----CCceE-EEEcccc-HHHHHHhhcCCC
Confidence            5899999999999999999999987       89999998    22211     11110 0112333 345567889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH----HHHHHHCCCCCCCcEEEechh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT----YITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~----~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      +||++++.....  +.......|+...+.+++.+.+.. .. .+|.+|-.. ...    ..+.+.. ...|....+.+-.
T Consensus        65 ~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~-~~-r~v~~SS~~-vyg~~~~~~~~E~~-~~~p~~~Y~~sK~  138 (311)
T 3m2p_A           65 AVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENN-IS-NIVYASTIS-AYSDETSLPWNEKE-LPLPDLMYGVSKL  138 (311)
T ss_dssp             EEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTT-CC-EEEEEEEGG-GCCCGGGCSBCTTS-CCCCSSHHHHHHH
T ss_pred             EEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEccHH-HhCCCCCCCCCCCC-CCCCCchhHHHHH
Confidence            999998865432  334456789999999999998864 44 344443211 000    0000111 1111122233334


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      ...++...+++..+++..-++...++|...
T Consensus       139 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  168 (311)
T 3m2p_A          139 ACEHIGNIYSRKKGLCIKNLRFAHLYGFNE  168 (311)
T ss_dssp             HHHHHHHHHHHHSCCEEEEEEECEEECSCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEeeCceeCcCC
Confidence            444555555666677666666555667543

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=98.29  E-value=1.7e-06  Score=78.46  Aligned_cols=98  Identities=10%  Similarity=0.151  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+|||+ |.+|..++..|...+.       +|+++|++    .++++.    +.+.      .+....+..+++
T Consensus         1 M~~~~~i~iiG~-G~~G~~~a~~l~~~g~-------~V~~~~~~----~~~~~~----~~~~------g~~~~~~~~~~~   58 (301)
T 3cky_A            1 MEKSIKIGFIGL-GAMGKPMAINLLKEGV-------TVYAFDLM----EANVAA----VVAQ------GAQACENNQKVA   58 (301)
T ss_dssp             ---CCEEEEECC-CTTHHHHHHHHHHTTC-------EEEEECSS----HHHHHH----HHTT------TCEECSSHHHHH
T ss_pred             CCCCCEEEEECc-cHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHH----HHHC------CCeecCCHHHHH
Confidence            556689999998 9999999999998886       89999998    444432    2211      233445667788


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHhhhcCCCeEEEEEcCch
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGK---ALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~---~i~~~~~p~a~viv~tNP~  136 (329)
                      +++|+||++...+               ..++.+..   .+....+++.+|+..+|-.
T Consensus        59 ~~~D~vi~~vp~~---------------~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~  101 (301)
T 3cky_A           59 AASDIIFTSLPNA---------------GIVETVMNGPGGVLSACKAGTVIVDMSSVS  101 (301)
T ss_dssp             HHCSEEEECCSSH---------------HHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred             hCCCEEEEECCCH---------------HHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence            8999999983211               12333332   4444445777888877643

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=98.29  E-value=7.6e-07  Score=78.70  Aligned_cols=99  Identities=13%  Similarity=0.230  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|.+++..|...++...   .+|+++|++    +++++....++         .+..+.+..++++++|
T Consensus         3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~---~~V~~~~r~----~~~~~~~~~~~---------g~~~~~~~~e~~~~aD   65 (247)
T 3gt0_A            3 KQIGFIGC-GNMGMAMIGGMINKNIVSS---NQIICSDLN----TANLKNASEKY---------GLTTTTDNNEVAKNAD   65 (247)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTSSCG---GGEEEECSC----HHHHHHHHHHH---------CCEECSCHHHHHHHCS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhCCCCCC---CeEEEEeCC----HHHHHHHHHHh---------CCEEeCChHHHHHhCC
Confidence            57999998 9999999999999886432   279999998    55444322111         2345567778899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +||++.  +  +            ..++++.+.+..+.+|+.++|..++.+.
T Consensus        66 vVilav--~--~------------~~~~~v~~~l~~~l~~~~~vvs~~~gi~  101 (247)
T 3gt0_A           66 ILILSI--K--P------------DLYASIINEIKEIIKNDAIIVTIAAGKS  101 (247)
T ss_dssp             EEEECS--C--T------------TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred             EEEEEe--C--H------------HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence            999984  1  1            2355666777777656777765655544

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=98.28  E-value=1.7e-06  Score=78.78  Aligned_cols=95  Identities=8%  Similarity=0.025  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.+||+|||+ |.+|..++..|+..|+       +|++||++    .++++.    +.+..  .   ...+++..+++++
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~-------~V~~~dr~----~~~~~~----~~~~g--~---~~~~~~~~e~~~~   64 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGL-------STWGADLN----PQACAN----LLAEG--A---CGAAASAREFAGV   64 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHH----HHHTT--C---SEEESSSTTTTTT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-------eEEEEECC----HHHHHH----HHHcC--C---ccccCCHHHHHhc
Confidence            3579999998 9999999999999987       89999998    444432    22211  1   1124667788999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQG---KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~---~~i~~~~~p~a~viv~tN  134 (329)
                      ||+||++...+               ..++++.   +.+....+++.+|+..|+
T Consensus        65 aDvvi~~vp~~---------------~~~~~v~~~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           65 VDALVILVVNA---------------AQVRQVLFGEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             CSEEEECCSSH---------------HHHHHHHC--CCCGGGSCTTCEEEECSC
T ss_pred             CCEEEEECCCH---------------HHHHHHHhChhhHHhhCCCCCEEEecCC
Confidence            99999984221               1334443   445555557778877774

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=98.28  E-value=7.9e-07  Score=83.07  Aligned_cols=95  Identities=13%  Similarity=0.200  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |.+.+||+|||. |.+|..++..|+..|.       +|.+||++    .++++.    +.+.      .+....+..+++
T Consensus        19 Mm~~mkIgiIGl-G~mG~~~A~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~------g~~~~~s~~e~~   76 (358)
T 4e21_A           19 YFQSMQIGMIGL-GRMGADMVRRLRKGGH-------ECVVYDLN----VNAVQA----LERE------GIAGARSIEEFC   76 (358)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHH----HHTT------TCBCCSSHHHHH
T ss_pred             hhcCCEEEEECc-hHHHHHHHHHHHhCCC-------EEEEEeCC----HHHHHH----HHHC------CCEEeCCHHHHH
Confidence            445689999998 9999999999999987       89999998    444432    2221      123345666777


Q ss_pred             CCc---cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KDA---NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~a---DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +++   |+||++...+                .++++++.+....+++.+||..||
T Consensus        77 ~~a~~~DvVi~~vp~~----------------~v~~vl~~l~~~l~~g~iiId~st  116 (358)
T 4e21_A           77 AKLVKPRVVWLMVPAA----------------VVDSMLQRMTPLLAANDIVIDGGN  116 (358)
T ss_dssp             HHSCSSCEEEECSCGG----------------GHHHHHHHHGGGCCTTCEEEECSS
T ss_pred             hcCCCCCEEEEeCCHH----------------HHHHHHHHHHhhCCCCCEEEeCCC
Confidence            777   9999973211                244455667676667888888876

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=98.28  E-value=2e-06  Score=77.63  Aligned_cols=93  Identities=8%  Similarity=0.106  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||+|||+ |.+|..++..|...|+       +|+++|++    +++++.    +.+.      .+..+++..+++++|
T Consensus         1 s~~i~iIG~-G~mG~~~a~~l~~~G~-------~V~~~dr~----~~~~~~----~~~~------g~~~~~~~~~~~~~a   58 (287)
T 3pef_A            1 SQKFGFIGL-GIMGSAMAKNLVKAGC-------SVTIWNRS----PEKAEE----LAAL------GAERAATPCEVVESC   58 (287)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----GGGGHH----HHHT------TCEECSSHHHHHHHC
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHC------CCeecCCHHHHHhcC
Confidence            368999998 9999999999999987       89999999    454442    2221      245556778889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQG---KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~---~~i~~~~~p~a~viv~tN  134 (329)
                      |+||++...+               ..++++.   +.+.+...++.+|+..++
T Consensus        59 Dvvi~~vp~~---------------~~~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           59 PVTFAMLADP---------------AAAEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             SEEEECCSSH---------------HHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             CEEEEEcCCH---------------HHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            9999983211               2344444   555555557778777765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.27  E-value=2.8e-06  Score=72.79  Aligned_cols=102  Identities=18%  Similarity=0.254  Sum_probs=67.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|++|++++..|++.|.       +|++++++    .+++...    .... .. ....++....++++++|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~~----~~~~-~~-~~~D~~d~~~~~~~~~d   63 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH-------EVTAIVRN----AGKITQT----HKDI-NI-LQKDIFDLTLSDLSDQN   63 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----SHHHHHH----CSSS-EE-EECCGGGCCHHHHTTCS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-------EEEEEEcC----chhhhhc----cCCC-eE-EeccccChhhhhhcCCC
Confidence            5899999999999999999999986       89999998    3333211    1000 00 00011111116889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||+++|.+...       ...|+...+.+++.+++..  ...+|++|
T Consensus        64 ~vi~~ag~~~~~-------~~~~~~~~~~l~~a~~~~~--~~~~v~~S  102 (221)
T 3ew7_A           64 VVVDAYGISPDE-------AEKHVTSLDHLISVLNGTV--SPRLLVVG  102 (221)
T ss_dssp             EEEECCCSSTTT-------TTSHHHHHHHHHHHHCSCC--SSEEEEEC
T ss_pred             EEEECCcCCccc-------cchHHHHHHHHHHHHHhcC--CceEEEEe
Confidence            999999875421       2347788889999888752  33555554

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=98.27  E-value=4.8e-06  Score=76.44  Aligned_cols=112  Identities=18%  Similarity=0.218  Sum_probs=74.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-hhhc--ccCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-IEDC--IFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-l~~~--~~~~~~~i~~~~~~~~al   81 (329)
                      .+||+|||+ |.+|+.++..|...|.       +|.++ .+    .++++....+ +...  .......+..+++. +++
T Consensus        19 ~~kI~IiGa-Ga~G~~~a~~L~~~G~-------~V~l~-~~----~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~   84 (318)
T 3hwr_A           19 GMKVAIMGA-GAVGCYYGGMLARAGH-------EVILI-AR----PQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAV   84 (318)
T ss_dssp             -CEEEEESC-SHHHHHHHHHHHHTTC-------EEEEE-CC----HHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGG
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC-------eEEEE-Ec----HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHc
Confidence            479999999 9999999999999887       89999 76    4444322211 0000  00111244555664 567


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHC
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA  147 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~  147 (329)
                      +++|+||++..  .              ..++++++.+..+..++.+|+.++|..+... .+.+..
T Consensus        85 ~~~D~vilavk--~--------------~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~-~l~~~~  133 (318)
T 3hwr_A           85 QGADLVLFCVK--S--------------TDTQSAALAMKPALAKSALVLSLQNGVENAD-TLRSLL  133 (318)
T ss_dssp             TTCSEEEECCC--G--------------GGHHHHHHHHTTTSCTTCEEEEECSSSSHHH-HHHHHC
T ss_pred             CCCCEEEEEcc--c--------------ccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH-HHHHHc
Confidence            99999999831  1              1346677788887778889999999887653 444554

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=98.25  E-value=9.2e-07  Score=89.89  Aligned_cols=103  Identities=13%  Similarity=0.121  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh----hh---hhccc-------CCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM----EI---EDCIF-------PLLVD   70 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~----dl---~~~~~-------~~~~~   70 (329)
                      .+||+|||+ |.||+.+|..++..|+       +|+++|++    .++++.-..    .+   .....       ....+
T Consensus       314 i~kV~VIGa-G~MG~~iA~~la~aG~-------~V~l~D~~----~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~  381 (715)
T 1wdk_A          314 VKQAAVLGA-GIMGGGIAYQSASKGT-------PILMKDIN----EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNG  381 (715)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHH
T ss_pred             CCEEEEECC-ChhhHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcC
Confidence            468999999 9999999999999998       89999999    444432100    01   00000       01135


Q ss_pred             eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ++.+++. +++++||+||++.  +            .+..+.+++...+.++++|++++  +||..
T Consensus       382 i~~~~d~-~~~~~aDlVIeaV--~------------e~~~vk~~v~~~l~~~~~~~~Il--asntS  430 (715)
T 1wdk_A          382 IRPTLSY-GDFGNVDLVVEAV--V------------ENPKVKQAVLAEVENHVREDAIL--ASNTS  430 (715)
T ss_dssp             EEEESSS-TTGGGCSEEEECC--C------------SCHHHHHHHHHHHHTTSCTTCEE--EECCS
T ss_pred             eEEECCH-HHHCCCCEEEEcC--C------------CCHHHHHHHHHHHHhhCCCCeEE--EeCCC
Confidence            7777776 8999999999983  2            23456677778888888778765  45543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.25  E-value=4.6e-06  Score=81.63  Aligned_cols=104  Identities=10%  Similarity=0.127  Sum_probs=72.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +|||.|+||+|++|++++..|++.|.       +|+.++++    .........|+.             ....++++++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~-------~V~~l~R~----~~~~~~v~~d~~-------------~~~~~~l~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH-------EVIQLVRK----EPKPGKRFWDPL-------------NPASDLLDGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESS----SCCTTCEECCTT-------------SCCTTTTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----CCCccceeeccc-------------chhHHhcCCC
Confidence            67999999999999999999999987       89999998    333222112221             2235678899


Q ss_pred             cEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRK---SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~---~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||++++....   ........+..|+...+.+++.+.+..... .+|.+|
T Consensus       203 D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~-r~V~~S  253 (516)
T 3oh8_A          203 DVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCT-TMISAS  253 (516)
T ss_dssp             SEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCC-EEEEEE
T ss_pred             CEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEEeC
Confidence            999999886432   112345567889999999999855443233 455554

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=98.25  E-value=2.1e-06  Score=79.70  Aligned_cols=105  Identities=13%  Similarity=0.059  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh-hc-ccCC--ccce-Eeec
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE-DC-IFPL--LVDV-SVHE   75 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~-~~-~~~~--~~~i-~~~~   75 (329)
                      ||++ +||+|||+ |.+|..++..|...|.       +|+++|++    .++++....... .. ....  ...+ ..++
T Consensus         1 mm~~-mki~iiG~-G~~G~~~a~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (359)
T 1bg6_A            1 MIES-KTYAVLGL-GNGGHAFAAYLALKGQ-------SVLAWDID----AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTS   67 (359)
T ss_dssp             ---C-CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHTSEEEESSSCCEEECCSEEES
T ss_pred             CCCc-CeEEEECC-CHHHHHHHHHHHhCCC-------EEEEEeCC----HHHHHHHHhcCCeEEeccccccccccceecC
Confidence            5654 89999998 9999999999998886       89999998    444443221100 00 0000  0122 3456


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +..++++++|+||++....                ...++++.+..+.+++++|+...|
T Consensus        68 ~~~~~~~~~D~vi~~v~~~----------------~~~~~~~~l~~~l~~~~~vv~~~~  110 (359)
T 1bg6_A           68 DIGLAVKDADVILIVVPAI----------------HHASIAANIASYISEGQLIILNPG  110 (359)
T ss_dssp             CHHHHHTTCSEEEECSCGG----------------GHHHHHHHHGGGCCTTCEEEESSC
T ss_pred             CHHHHHhcCCEEEEeCCch----------------HHHHHHHHHHHhCCCCCEEEEcCC
Confidence            6667789999999984221                124556777776667777666644

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=98.23  E-value=1.9e-06  Score=76.13  Aligned_cols=99  Identities=13%  Similarity=0.081  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccc--hhhh--------HhhhhhcccCCccceEee
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKA--IKGV--------IMEIEDCIFPLLVDVSVH   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~--~~~~--------~~dl~~~~~~~~~~i~~~   74 (329)
                      .+||+|||+ |.+|.+++..|+..|.       +|+++|++    .++  .+..        ..++...    ..... .
T Consensus        19 ~~kIgiIG~-G~mG~alA~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~   81 (245)
T 3dtt_A           19 GMKIAVLGT-GTVGRTMAGALADLGH-------EVTIGTRD----PKATLARAEPDAMGAPPFSQWLPE----HPHVH-L   81 (245)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHTCC-------CCHHHHGGG----STTCE-E
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----hhhhhhhhhhhhhcchhhhHHHhh----cCcee-c
Confidence            479999998 9999999999999987       89999998    333  1100        1111111    01122 2


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hhhcCCCeEEEEEcCchh
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKAL-NSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i-~~~~~p~a~viv~tNP~~  137 (329)
                      .+..+++++||+||++...+                ...+.+..+ .... ++.+||.++||.+
T Consensus        82 ~~~~e~~~~aDvVilavp~~----------------~~~~~~~~i~~~~l-~g~ivi~~s~~~~  128 (245)
T 3dtt_A           82 AAFADVAAGAELVVNATEGA----------------SSIAALTAAGAENL-AGKILVDIANPLD  128 (245)
T ss_dssp             EEHHHHHHHCSEEEECSCGG----------------GHHHHHHHHCHHHH-TTSEEEECCCCEE
T ss_pred             cCHHHHHhcCCEEEEccCcH----------------HHHHHHHHhhhhhc-CCCEEEECCCCCC
Confidence            44577889999999983211                111222233 3343 6779999999873

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=98.23  E-value=5.2e-06  Score=80.56  Aligned_cols=99  Identities=13%  Similarity=0.120  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD-   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~-   83 (329)
                      ++||+|||+ |.+|++++..|+..|.       +|.++|++    .++++.......    .  ..+..+.+..+++++ 
T Consensus        15 ~~~IgvIGl-G~MG~~lA~~La~~G~-------~V~v~~r~----~~~~~~l~~~~~----~--~gi~~~~s~~e~v~~l   76 (480)
T 2zyd_A           15 KQQIGVVGM-AVMGRNLALNIESRGY-------TVSIFNRS----REKTEEVIAENP----G--KKLVPYYTVKEFVESL   76 (480)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHTTTC-------CEEEECSS----HHHHHHHHHHST----T--SCEEECSSHHHHHHTB
T ss_pred             CCeEEEEcc-HHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHhhCC----C--CCeEEeCCHHHHHhCC
Confidence            368999999 9999999999999887       89999998    554443221111    0  135566676676666 


Q ss_pred             --ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          84 --ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        84 --aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                        +|+||++...+               +.++++++.+..+.+|+.+||..+|-.
T Consensus        77 ~~aDvVil~Vp~~---------------~~v~~vl~~l~~~l~~g~iIId~s~g~  116 (480)
T 2zyd_A           77 ETPRRILLMVKAG---------------AGTDAAIDSLKPYLDKGDIIIDGGNTF  116 (480)
T ss_dssp             CSSCEEEECSCSS---------------SHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             CCCCEEEEECCCH---------------HHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence              99999983221               134555567777766788888888865

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=98.23  E-value=3.4e-06  Score=77.42  Aligned_cols=97  Identities=9%  Similarity=0.067  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~   82 (329)
                      .+||+|||+ |.+|.+++..|+..| .       +|++||++.+. .++.+.....+...      .+  .+ +..++++
T Consensus        24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~-------~V~~~dr~~~~-~~~~~~~~~~~~~~------g~--~~~s~~e~~~   86 (317)
T 4ezb_A           24 MTTIAFIGF-GEAAQSIAGGLGGRNAA-------RLAAYDLRFND-PAASGALRARAAEL------GV--EPLDDVAGIA   86 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCS-------EEEEECGGGGC-TTTHHHHHHHHHHT------TC--EEESSGGGGG
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHcCCC-------eEEEEeCCCcc-ccchHHHHHHHHHC------CC--CCCCHHHHHh
Confidence            468999998 999999999999998 6       89999998210 12222222222221      12  34 6678999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +||+||++...+.                ..+.++.+....+++.+||..|+
T Consensus        87 ~aDvVi~avp~~~----------------~~~~~~~i~~~l~~~~ivv~~st  122 (317)
T 4ezb_A           87 CADVVLSLVVGAA----------------TKAVAASAAPHLSDEAVFIDLNS  122 (317)
T ss_dssp             GCSEEEECCCGGG----------------HHHHHHHHGGGCCTTCEEEECCS
T ss_pred             cCCEEEEecCCHH----------------HHHHHHHHHhhcCCCCEEEECCC
Confidence            9999999843211                11122555555557777777764

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=98.23  E-value=5e-06  Score=74.96  Aligned_cols=93  Identities=15%  Similarity=0.242  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||++|.+|+.++..|...|+       +|+++|++    .++++..    .+.  .    +..+ +..++++++|
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~-------~V~~~~r~----~~~~~~~----~~~--g----~~~~-~~~~~~~~aD   69 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAH-------HLAAIEIA----PEGRDRL----QGM--G----IPLT-DGDGWIDEAD   69 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSS-------EEEEECCS----HHHHHHH----HHT--T----CCCC-CSSGGGGTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHH----Hhc--C----CCcC-CHHHHhcCCC
Confidence            6999999779999999999999886       89999998    4444322    111  1    1122 4567889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++..  .              ..++++.+.+....+++++|+..++..
T Consensus        70 vVi~av~--~--------------~~~~~v~~~l~~~l~~~~ivv~~s~~~  104 (286)
T 3c24_A           70 VVVLALP--D--------------NIIEKVAEDIVPRVRPGTIVLILDAAA  104 (286)
T ss_dssp             EEEECSC--H--------------HHHHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred             EEEEcCC--c--------------hHHHHHHHHHHHhCCCCCEEEECCCCc
Confidence            9999831  1              125667777777766788887777755

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=98.22  E-value=3.3e-06  Score=77.16  Aligned_cols=94  Identities=12%  Similarity=0.167  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.+||+|||+ |.+|..++..|+..|+       +|+++|++    .++++..    .+.      .+..+++..+++++
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~-------~V~~~dr~----~~~~~~l----~~~------g~~~~~~~~~~~~~   77 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGF-------KVTVWNRT----LSKCDEL----VEH------GASVCESPAEVIKK   77 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----GGGGHHH----HHT------TCEECSSHHHHHHH
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHH----HHC------CCeEcCCHHHHHHh
Confidence            3479999998 9999999999999987       89999999    5544422    221      23455677788999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQG---KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~---~~i~~~~~p~a~viv~tN  134 (329)
                      ||+||++...+               ..++++.   +.+.....++.+||..|+
T Consensus        78 aDvvi~~vp~~---------------~~~~~v~~~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           78 CKYTIAMLSDP---------------CAALSVVFDKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             CSEEEECCSSH---------------HHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred             CCEEEEEcCCH---------------HHHHHHHhCchhhhhccCCCCEEEECCC
Confidence            99999974221               1344444   455555557778777775

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.21  E-value=4.1e-06  Score=77.79  Aligned_cols=119  Identities=13%  Similarity=0.137  Sum_probs=74.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh--CCCCCCCCCceEEEEecCCccc------ccchhhhHhhhhhcccCC-ccceEee
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN--GDLLGKDQPIILQLLEASNKKS------QKAIKGVIMEIEDCIFPL-LVDVSVH   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~--~~~~~~~~~~ei~L~D~~~~~~------~~~~~~~~~dl~~~~~~~-~~~i~~~   74 (329)
                      ++++|.|+||+|++|++++..|++  .|.       +|+++|++....      .+.+. ....+....... ..++.-.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~   80 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKA-------KVVVLDKFRSNTLFSNNRPSSLG-HFKNLIGFKGEVIAADINNP   80 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTS-------EEEEEECCCCC-------CCCCC-CGGGGTTCCSEEEECCTTCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCC-------eEEEEECCCccccccccchhhhh-hhhhccccCceEEECCCCCH
Confidence            357999999999999999999999  777       999999872100      00000 000111000000 0111111


Q ss_pred             cCcccc-cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          75 ENPITA-FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        75 ~~~~~a-l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .+..++ ..++|+||++|+.......+....+..|+.....+++.+++.. ..  ||++|
T Consensus        81 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~--~V~~S  137 (362)
T 3sxp_A           81 LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK--VIYAS  137 (362)
T ss_dssp             HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE--EEEEE
T ss_pred             HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc--EEEeC
Confidence            122333 6799999999986543345667788999999999999998863 33  44444

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.21  E-value=2.6e-06  Score=73.35  Aligned_cols=104  Identities=10%  Similarity=0.027  Sum_probs=68.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|++|++++..|++.|.       +|++++++    .+++..    +....... ....++....++++++|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~----~~~~~~~~-~~~D~~d~~~~~~~~~d   64 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH-------EVLAVVRD----PQKAAD----RLGATVAT-LVKEPLVLTEADLDSVD   64 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHH----HTCTTSEE-EECCGGGCCHHHHTTCS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC-------EEEEEEec----cccccc----ccCCCceE-EecccccccHhhcccCC
Confidence            5799999999999999999999987       89999998    333321    11100000 00011111116789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||+++|....+..     ...|+...+.+++.+++.  . ..+|++|
T Consensus        65 ~vi~~ag~~~~~~~-----~~~n~~~~~~l~~a~~~~--~-~~~v~~S  104 (224)
T 3h2s_A           65 AVVDALSVPWGSGR-----GYLHLDFATHLVSLLRNS--D-TLAVFIL  104 (224)
T ss_dssp             EEEECCCCCTTSSC-----THHHHHHHHHHHHTCTTC--C-CEEEEEC
T ss_pred             EEEECCccCCCcch-----hhHHHHHHHHHHHHHHHc--C-CcEEEEe
Confidence            99999887532221     346888889999888875  2 4566664

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.20  E-value=8.8e-06  Score=73.39  Aligned_cols=101  Identities=14%  Similarity=0.129  Sum_probs=68.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|+||++++..|.+.|+       +|+.+.++    .+... ...|               ....++++++|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~-------~V~~l~R~----~~~~~-~~~~---------------~~~~~~l~~~d   53 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH-------EVTLVSRK----PGPGR-ITWD---------------ELAASGLPSCD   53 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----CCTTE-EEHH---------------HHHHHCCCSCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----CCcCe-eecc---------------hhhHhhccCCC
Confidence            6899999999999999999999998       99999887    22111 0011               11235678999


Q ss_pred             EEEEeCCCCCC-----CCC-CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRK-----SNM-ERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~-----~g~-~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .||++++.+-.     ... ........|+...+.+.+.++....+..+++..|
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~S  107 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVT  107 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEE
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEe
Confidence            99998874321     111 1335567788899999888887643344444443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.20  E-value=2.4e-06  Score=73.39  Aligned_cols=101  Identities=17%  Similarity=0.237  Sum_probs=65.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|+||+|.+|+.++..|...+.       +|+++|++    .++++....++.... . ..++.. .+..++++++|
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~D   66 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH-------EIVVGSRR----EEKAEAKAAEYRRIA-G-DASITG-MKNEDAAEACD   66 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESS----HHHHHHHHHHHHHHH-S-SCCEEE-EEHHHHHHHCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcccc-c-cCCCCh-hhHHHHHhcCC
Confidence            4899999559999999999998886       89999998    444432221111000 0 012332 44567889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +||++...                ...+++.+.+.+.. ++.+++..+|+.+
T Consensus        67 ~Vi~~~~~----------------~~~~~~~~~l~~~~-~~~~vi~~~~g~~  101 (212)
T 1jay_A           67 IAVLTIPW----------------EHAIDTARDLKNIL-REKIVVSPLVPVS  101 (212)
T ss_dssp             EEEECSCH----------------HHHHHHHHHTHHHH-TTSEEEECCCCEE
T ss_pred             EEEEeCCh----------------hhHHHHHHHHHHHc-CCCEEEEcCCCcC
Confidence            99998421                12334444555544 5778899999765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=98.20  E-value=5.5e-06  Score=76.07  Aligned_cols=93  Identities=15%  Similarity=0.243  Sum_probs=64.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|..++..|+..|.       +|++||++    .++++.    +.+.      .+..+++..+++++|
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~-------~V~~~dr~----~~~~~~----l~~~------g~~~~~~~~e~~~~a   88 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGY-------ALQVWNRT----PARAAS----LAAL------GATIHEQARAAARDA   88 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTC-------EEEEECSC----HHHHHH----HHTT------TCEEESSHHHHHTTC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCC-------eEEEEcCC----HHHHHH----HHHC------CCEeeCCHHHHHhcC
Confidence            469999998 9999999999999987       89999999    444432    2221      245567778899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGK--ALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~--~i~~~~~p~a~viv~tN  134 (329)
                      |+||++...+               ..++++..  .+.....++.+||..|+
T Consensus        89 DvVi~~vp~~---------------~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           89 DIVVSMLENG---------------AVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             SEEEECCSSH---------------HHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             CEEEEECCCH---------------HHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            9999984211               12334432  33333346777777765

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=98.20  E-value=1.2e-05  Score=72.85  Aligned_cols=105  Identities=15%  Similarity=0.201  Sum_probs=67.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-C--CccceEeec--Ccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-P--LLVDVSVHE--NPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~--~~~~i~~~~--~~~~a   80 (329)
                      +||+|||+ |.+|+.++..|...|.       +|+++|++    .++++.....-..... +  ...++..++  +..++
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~-------~V~~~~r~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   71 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGN-------DVTLIDQW----PAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQ   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTT
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCC-------cEEEEECC----HHHHHHHHhCCEEEEeCCCeeEecceeecchhhccc
Confidence            58999998 9999999999999887       89999998    4444322111000000 0  001122222  12234


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++++|+||++..  .              ..+.++.+.+.++.+++.+|+.++|..+.
T Consensus        72 ~~~~d~vi~~v~--~--------------~~~~~v~~~l~~~l~~~~~iv~~~~g~~~  113 (316)
T 2ew2_A           72 NEQVDLIIALTK--A--------------QQLDAMFKAIQPMITEKTYVLCLLNGLGH  113 (316)
T ss_dssp             SCCCSEEEECSC--H--------------HHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred             CCCCCEEEEEec--c--------------ccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence            459999999831  1              23566777788877678888888887663

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=98.20  E-value=1e-06  Score=81.55  Aligned_cols=102  Identities=17%  Similarity=0.208  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH-hhhhhcc--cCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI-MEIEDCI--FPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~-~dl~~~~--~~~~~~i~~~~~~~~al   81 (329)
                      .+||+|||+ |.+|+.++..|...|.       +|.++|++    + .++... ..+.-..  .....++..+++. +++
T Consensus         3 ~mkI~IiGa-G~~G~~~a~~L~~~g~-------~V~~~~r~----~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~   68 (335)
T 3ghy_A            3 LTRICIVGA-GAVGGYLGARLALAGE-------AINVLARG----A-TLQALQTAGLRLTEDGATHTLPVRATHDA-AAL   68 (335)
T ss_dssp             CCCEEEESC-CHHHHHHHHHHHHTTC-------CEEEECCH----H-HHHHHHHTCEEEEETTEEEEECCEEESCH-HHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEEECh----H-HHHHHHHCCCEEecCCCeEEEeeeEECCH-HHc
Confidence            379999999 9999999999999886       89999986    2 122111 0010000  0011234455554 457


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +++|+||++..  .              ..++++++.+..+.+|+..|+.+.|..
T Consensus        69 ~~~D~Vilavk--~--------------~~~~~~~~~l~~~l~~~~~iv~~~nGi  107 (335)
T 3ghy_A           69 GEQDVVIVAVK--A--------------PALESVAAGIAPLIGPGTCVVVAMNGV  107 (335)
T ss_dssp             CCCSEEEECCC--H--------------HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred             CCCCEEEEeCC--c--------------hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence            99999999831  1              345667777887766888999999985

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=98.19  E-value=4e-06  Score=76.66  Aligned_cols=98  Identities=9%  Similarity=0.053  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ||...+||+|||+ |.+|+.++..|...|.       +|.++|++    .++++..    ...      .+....+..++
T Consensus        26 ~~~~~~~I~iIG~-G~mG~~~a~~l~~~g~-------~V~~~~~~----~~~~~~~----~~~------g~~~~~~~~~~   83 (316)
T 2uyy_A           26 ITPTDKKIGFLGL-GLMGSGIVSNLLKMGH-------TVTVWNRT----AEKCDLF----IQE------GARLGRTPAEV   83 (316)
T ss_dssp             CCCCSSCEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----GGGGHHH----HHT------TCEECSCHHHH
T ss_pred             CCCCCCeEEEEcc-cHHHHHHHHHHHhCCC-------EEEEEeCC----HHHHHHH----HHc------CCEEcCCHHHH
Confidence            3444589999998 9999999999998886       89999998    4444322    211      12344566678


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---hhcCCCeEEEEEcCc
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN---SVASRDVKVLVVGNP  135 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~---~~~~p~a~viv~tNP  135 (329)
                      ++++|+||++...+               ..++++...+.   ....++.+|+.++|-
T Consensus        84 ~~~~DvVi~av~~~---------------~~~~~v~~~~~~~~~~l~~~~~vv~~s~~  126 (316)
T 2uyy_A           84 VSTCDITFACVSDP---------------KAAKDLVLGPSGVLQGIRPGKCYVDMSTV  126 (316)
T ss_dssp             HHHCSEEEECCSSH---------------HHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred             HhcCCEEEEeCCCH---------------HHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence            88999999984211               22344444332   333477788878774

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.18  E-value=8e-06  Score=76.44  Aligned_cols=113  Identities=18%  Similarity=0.133  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
                      ++++|.|+||+|++|++++..|+..|.       +|+++|++.    ......    ......+ ..++.-..+..++++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGH-------YVIASDWKK----NEHMTE----DMFCDEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC----CSSSCG----GGTCSEEEECCTTSHHHHHHHHT
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCC-------eEEEEECCC----ccchhh----ccCCceEEECCCCCHHHHHHHhC
Confidence            347899999999999999999999886       899999982    221110    0000000 001111122356778


Q ss_pred             CccEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKS---NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~---g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++|+||++++.....   .....+.+..|+.....+++.+.+.. .. .||++|
T Consensus        93 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~-~~V~~S  144 (379)
T 2c5a_A           93 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK-RFFYAS  144 (379)
T ss_dssp             TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CS-EEEEEE
T ss_pred             CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence            999999998864321   23456677889999999999998763 44 444444

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.18  E-value=1.6e-05  Score=71.96  Aligned_cols=165  Identities=12%  Similarity=0.075  Sum_probs=94.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~al~~a   84 (329)
                      |||.|+||+|++|++++..|++.|.       +|+++|++.    .......    ..... ...++.-.. ..+++++ 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~----~~~~~~~~~Dl~d~~-~~~~~~~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY-------EVVVVDNLS----SGRREFV----NPSAELHVRDLKDYS-WGAGIKG-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECCCS----SCCGGGS----CTTSEEECCCTTSTT-TTTTCCC-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-------EEEEEeCCC----CCchhhc----CCCceEEECccccHH-HHhhcCC-
Confidence            5899999999999999999999987       899999872    2211110    00000 001111111 3456666 


Q ss_pred             cEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH-H--HHHHHHCCCCCCCcEEEec
Q psy9582          85 NIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN-T--YITMKSAPDLSYKNFTAML  159 (329)
Q Consensus        85 DiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~-~--~~~~~~~~~~~~~~i~~~t  159 (329)
                      |+||++++.+..  ...+....+..|+.....+++.+.+.. .. .+|++|--.-.- .  ..+.+.. ..++....+.+
T Consensus        64 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~iv~~SS~~vyg~~~~~~~~e~~-~~~p~~~Y~~s  140 (312)
T 3ko8_A           64 DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VR-TVVFASSSTVYGDADVIPTPEEE-PYKPISVYGAA  140 (312)
T ss_dssp             SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CC-EEEEEEEGGGGCSCSSSSBCTTS-CCCCCSHHHHH
T ss_pred             CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEeCcHHHhCCCCCCCCCCCC-CCCCCChHHHH
Confidence            999999886432  223456677889999999999998864 44 444444211000 0  0000001 11222223334


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      -....++...+++..+++..-++...++|..
T Consensus       141 K~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~  171 (312)
T 3ko8_A          141 KAAGEVMCATYARLFGVRCLAVRYANVVGPR  171 (312)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeccccCcC
Confidence            4444455666677778776666655567764

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=98.18  E-value=2.9e-06  Score=76.22  Aligned_cols=101  Identities=13%  Similarity=0.118  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~~~i~~~~~~~~al~~a   84 (329)
                      |||+|||+ |.+|+.++..|.+.|.       +|+++|++    .++++.    +..... .......+..+..++++++
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~-------~V~~~~r~----~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~   64 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGH-------EVQGWLRV----PQPYCS----VNLVETDGSIFNESLTANDPDFLATS   64 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCSEEE----EEEECTTSCEEEEEEEESCHHHHHTC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCC-------CEEEEEcC----ccceee----EEEEcCCCceeeeeeeecCccccCCC
Confidence            48999999 9999999999999887       89999998    333332    111100 0000122222335778899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      |+||++....                .+.++++.+..+.+++.+|+.++|..+.
T Consensus        65 d~vi~~v~~~----------------~~~~v~~~l~~~l~~~~~vv~~~~g~~~  102 (291)
T 1ks9_A           65 DLLLVTLKAW----------------QVSDAVKSLASTLPVTTPILLIHNGMGT  102 (291)
T ss_dssp             SEEEECSCGG----------------GHHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred             CEEEEEecHH----------------hHHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence            9999983221                1355566777766678888888997644

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=98.17  E-value=3.8e-06  Score=77.15  Aligned_cols=114  Identities=12%  Similarity=0.132  Sum_probs=69.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-C-ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-L-LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~-~~~i~~~~~~~~al~~   83 (329)
                      +||+|||+ |.+|+.++..|.+.|.       +|.++|+++   .+.+...-..+.....+ . ...+.++++..++.++
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~-------~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~   71 (320)
T 3i83_A            3 LNILVIGT-GAIGSFYGALLAKTGH-------CVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETK   71 (320)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHTTC-------EEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCC
Confidence            68999999 9999999999999886       899999981   11111100001110001 0 0123455665555559


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA  147 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~  147 (329)
                      +|+||++.-.    .            .+.++++.+..+..++..|+.+.|-.+.. ..+.+..
T Consensus        72 ~DlVilavK~----~------------~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~-~~l~~~~  118 (320)
T 3i83_A           72 PDCTLLCIKV----V------------EGADRVGLLRDAVAPDTGIVLISNGIDIE-PEVAAAF  118 (320)
T ss_dssp             CSEEEECCCC----C------------TTCCHHHHHTTSCCTTCEEEEECSSSSCS-HHHHHHS
T ss_pred             CCEEEEecCC----C------------ChHHHHHHHHhhcCCCCEEEEeCCCCChH-HHHHHHC
Confidence            9999998322    1            12234556666666788889999987644 2344444

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.17  E-value=4e-06  Score=72.26  Aligned_cols=99  Identities=22%  Similarity=0.195  Sum_probs=62.8

Q ss_pred             EEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCccccc-chhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           7 RISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQK-AIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~-~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +|.|+||+|++|++++..|+ ..|.       +|++++++    .+ +++.......... ....++.-..+..++++++
T Consensus         7 ~vlVtGasg~iG~~~~~~l~~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~   74 (221)
T 3r6d_A            7 YITILGAAGQIAQXLTATLLTYTDM-------HITLYGRQ----LKTRIPPEIIDHERVT-VIEGSFQNPGXLEQAVTNA   74 (221)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCC-------EEEEEESS----HHHHSCHHHHTSTTEE-EEECCTTCHHHHHHHHTTC
T ss_pred             EEEEEeCCcHHHHHHHHHHHhcCCc-------eEEEEecC----ccccchhhccCCCceE-EEECCCCCHHHHHHHHcCC
Confidence            59999999999999999999 7887       89999998    44 3432210000000 0001111112345678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||+++|..             |.. .+.+++.+++.. .. .||++|
T Consensus        75 d~vv~~ag~~-------------n~~-~~~~~~~~~~~~-~~-~iv~iS  107 (221)
T 3r6d_A           75 EVVFVGAMES-------------GSD-MASIVKALSRXN-IR-RVIGVS  107 (221)
T ss_dssp             SEEEESCCCC-------------HHH-HHHHHHHHHHTT-CC-EEEEEE
T ss_pred             CEEEEcCCCC-------------Chh-HHHHHHHHHhcC-CC-eEEEEe
Confidence            9999998753             334 778888888753 33 444444

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=98.17  E-value=2.3e-06  Score=75.98  Aligned_cols=93  Identities=14%  Similarity=0.178  Sum_probs=65.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|+.++..|...+...   +.+|.++|++    .++ .               .+..+.+..++++++
T Consensus         4 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~---~~~v~~~~~~----~~~-~---------------g~~~~~~~~~~~~~~   59 (262)
T 2rcy_A            4 NIKLGFMGL-GQMGSALAHGIANANIIK---KENLFYYGPS----KKN-T---------------TLNYMSSNEELARHC   59 (262)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHHTSSC---GGGEEEECSS----CCS-S---------------SSEECSCHHHHHHHC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCCC---CCeEEEEeCC----ccc-C---------------ceEEeCCHHHHHhcC
Confidence            368999999 999999999999877321   0179999998    333 0               123445566788899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      |+||++..  .              ..++++++.+..+. ++..++..+|.++.
T Consensus        60 D~vi~~v~--~--------------~~~~~v~~~l~~~l-~~~~vv~~~~gi~~   96 (262)
T 2rcy_A           60 DIIVCAVK--P--------------DIAGSVLNNIKPYL-SSKLLISICGGLNI   96 (262)
T ss_dssp             SEEEECSC--T--------------TTHHHHHHHSGGGC-TTCEEEECCSSCCH
T ss_pred             CEEEEEeC--H--------------HHHHHHHHHHHHhc-CCCEEEEECCCCCH
Confidence            99999842  1              12455566677776 67788888887654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.17  E-value=7.9e-06  Score=69.04  Aligned_cols=107  Identities=15%  Similarity=0.112  Sum_probs=67.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~al~~a   84 (329)
                      +||.|+||+|++|++++..|++.|.       +|++++++    .+++...    ...... ...++.-..+..++++++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-------~V~~~~r~----~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   68 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-------EVTVLVRD----SSRLPSE----GPRPAHVVVGDVLQAADVDKTVAGQ   68 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----GGGSCSS----SCCCSEEEESCTTSHHHHHHHHTTC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEEeC----hhhcccc----cCCceEEEEecCCCHHHHHHHHcCC
Confidence            7999999999999999999999886       89999998    3322210    000000 000111112345678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+||++++.......     ...|+.....+++.+.+.. .. .+|++|-
T Consensus        69 d~vi~~a~~~~~~~~-----~~~n~~~~~~~~~~~~~~~-~~-~~v~~Ss  111 (206)
T 1hdo_A           69 DAVIVLLGTRNDLSP-----TTVMSEGARNIVAAMKAHG-VD-KVVACTS  111 (206)
T ss_dssp             SEEEECCCCTTCCSC-----CCHHHHHHHHHHHHHHHHT-CC-EEEEECC
T ss_pred             CEEEECccCCCCCCc-----cchHHHHHHHHHHHHHHhC-CC-eEEEEee
Confidence            999999876432111     1256777888888888763 33 4555543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=98.16  E-value=1.9e-05  Score=72.37  Aligned_cols=94  Identities=16%  Similarity=0.200  Sum_probs=63.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc-ccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT-AFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~-al~~a   84 (329)
                      +||+|||+ |.+|.+++..|...|...     +|+++|++    .++++. +.+.     ...  -..+++..+ ++++|
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~-----~V~~~dr~----~~~~~~-a~~~-----G~~--~~~~~~~~~~~~~~a   95 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKG-----KIYGYDIN----PESISK-AVDL-----GII--DEGTTSIAKVEDFSP   95 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCS-----EEEEECSC----HHHHHH-HHHT-----TSC--SEEESCTTGGGGGCC
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCC-----EEEEEECC----HHHHHH-HHHC-----CCc--chhcCCHHHHhhccC
Confidence            79999998 999999999999988743     89999998    444332 1111     111  123456667 89999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||++..  .              ..+.++.+.+..+.+++++|+.++
T Consensus        96 DvVilavp--~--------------~~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A           96 DFVMLSSP--V--------------RTFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             SEEEECSC--G--------------GGHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CEEEEeCC--H--------------HHHHHHHHHHhhccCCCcEEEECC
Confidence            99999832  1              123444556666656787776654

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=98.16  E-value=1.5e-05  Score=71.79  Aligned_cols=108  Identities=16%  Similarity=0.055  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|+.++..|...+.--     +|.++|++    .++++.    +...  ...  ...+++..++++++
T Consensus         6 ~~~I~iIG~-G~mG~~~a~~l~~~g~~~-----~V~~~d~~----~~~~~~----~~~~--g~~--~~~~~~~~~~~~~a   67 (290)
T 3b1f_A            6 EKTIYIAGL-GLIGASLALGIKRDHPHY-----KIVGYNRS----DRSRDI----ALER--GIV--DEATADFKVFAALA   67 (290)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTS-----EEEEECSS----HHHHHH----HHHT--TSC--SEEESCTTTTGGGC
T ss_pred             cceEEEEee-CHHHHHHHHHHHhCCCCc-----EEEEEcCC----HHHHHH----HHHc--CCc--ccccCCHHHhhcCC
Confidence            368999998 999999999998874211     89999998    444432    1111  110  13445666788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-cCCCeEEEEEcCchhhHHHHHHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV-ASRDVKVLVVGNPVNTNTYITMKS  146 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~-~~p~a~viv~tNP~~~~~~~~~~~  146 (329)
                      |+||++...                ...+++++.+..+ .+++.+|+.++|.....+..+.+.
T Consensus        68 DvVilavp~----------------~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~  114 (290)
T 3b1f_A           68 DVIILAVPI----------------KKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYY  114 (290)
T ss_dssp             SEEEECSCH----------------HHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHH
T ss_pred             CEEEEcCCH----------------HHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHh
Confidence            999998321                2336666777766 557888877776433223444443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.15  E-value=7.9e-06  Score=74.92  Aligned_cols=119  Identities=13%  Similarity=0.178  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh--Hhhhhhc--ccCC-ccceEeecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV--IMEIEDC--IFPL-LVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~--~~dl~~~--~~~~-~~~i~~~~~~~   78 (329)
                      +.++|.|+||+|++|++++..|++.|.       +|+.++++    .+.....  ..++...  ...+ ..++.-..+..
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   72 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRD----PTNVKKVKHLLDLPKAETHLTLWKADLADEGSFD   72 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----TTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEECC----cchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHH
Confidence            457899999999999999999999887       89988877    2211100  0111100  0000 01111112345


Q ss_pred             cccCCccEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 TAFKDANIAILIGSFPRKSNMER-SELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~-~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++++++|+||++|+.......+. .+.+..|+.....+++.+.+.. .-..||++|-
T Consensus        73 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS  128 (337)
T 2c29_D           73 EAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSS  128 (337)
T ss_dssp             HHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECC
T ss_pred             HHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeee
Confidence            67889999999887542111222 3467889999999999888763 2335666653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.14  E-value=3.6e-06  Score=77.98  Aligned_cols=118  Identities=17%  Similarity=0.138  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al   81 (329)
                      +.++|.|+||+|++|++++..|++. |..      +|++++++    +.+.......+......+ ..++.-.....+++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~------~V~~~~r~----~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~   89 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAK------KIIVYSRD----ELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL   89 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCS------EEEEEESC----HHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCC------EEEEEECC----hhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH
Confidence            3479999999999999999999987 742      79999998    443332222222110000 01111112344678


Q ss_pred             CCccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KDANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++.|+||++++....+.  ....+.+..|+.....+++.+.+.. .. .+|.+|
T Consensus        90 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~-~~V~~S  141 (344)
T 2gn4_A           90 EGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-IS-QVIALS  141 (344)
T ss_dssp             TTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CS-EEEEEC
T ss_pred             hcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CC-EEEEec
Confidence            89999999988654211  2345677889999999999998863 44 455554

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=98.14  E-value=4.6e-06  Score=76.98  Aligned_cols=111  Identities=13%  Similarity=0.087  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
                      ++||+|||+ |.+|+.++..|++.|.       +|+++|++    .++++....+-.....+. ..++..+++..+ +++
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~-------~V~~~~r~----~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~   80 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGE-------EVILWARR----KEIVDLINVSHTSPYVEESKITVRATNDLEE-IKK   80 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----HHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCT
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcC
Confidence            589999999 9999999999999887       89999998    444443321110000000 003566667666 899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh-----hHHHHHHHHC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN-----TNTYITMKSA  147 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~-----~~~~~~~~~~  147 (329)
                      +|+||++..  .              ..++++++.+..   ++.++|.++|..+     .+...+.+..
T Consensus        81 aDvVil~vk--~--------------~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~  130 (335)
T 1z82_A           81 EDILVIAIP--V--------------QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEIL  130 (335)
T ss_dssp             TEEEEECSC--G--------------GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHT
T ss_pred             CCEEEEECC--H--------------HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHc
Confidence            999999832  1              234444444433   5778888888543     3455554443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.13  E-value=2.4e-06  Score=78.60  Aligned_cols=119  Identities=17%  Similarity=0.094  Sum_probs=72.2

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPI   78 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~   78 (329)
                      |+.+++|.|+||+|++|++++..|+..  +.       +|+++|++..  ..... ...++......+ ..++.-..+..
T Consensus         1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~~--~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~   70 (348)
T 1oc2_A            1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDV-------HVTVLDKLTY--AGNKA-NLEAILGDRVELVVGDIADAELVD   70 (348)
T ss_dssp             --CCSEEEEETTTSHHHHHHHHHHHHHCTTC-------EEEEEECCCT--TCCGG-GTGGGCSSSEEEEECCTTCHHHHH
T ss_pred             CCcCcEEEEeCCccHHHHHHHHHHHHhCCCC-------EEEEEeCCCC--CCChh-HHhhhccCCeEEEECCCCCHHHHH
Confidence            443468999999999999999999987  55       8999998621  00111 111111100000 00111112234


Q ss_pred             cccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          79 TAFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++++++|+||++++.....  ..+....+..|+.....+++.+.+.. .  .+|++|
T Consensus        71 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~--~~v~~S  124 (348)
T 1oc2_A           71 KLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I--RFHHVS  124 (348)
T ss_dssp             HHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C--EEEEEE
T ss_pred             HHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C--eEEEec
Confidence            6788999999998864310  11234567889999999999998863 3  555554

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=98.13  E-value=6.3e-06  Score=75.70  Aligned_cols=101  Identities=14%  Similarity=0.165  Sum_probs=66.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec--CCcccccchhhhHhhhhhc--ccCCccceEeec--Cccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA--SNKKSQKAIKGVIMEIEDC--IFPLLVDVSVHE--NPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~--~~~~~~~~~~~~~~dl~~~--~~~~~~~i~~~~--~~~~   79 (329)
                      |||+|||+ |.+|+.++..|...|.       +|+++|+  +    .++++.........  .... .++..++  +..+
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~-------~V~~~~r~~~----~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~   67 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGN-------EVRIWGTEFD----TEILKSISAGREHPRLGVKL-NGVEIFWPEQLEK   67 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC-------EEEEECCGGG----HHHHHHHHTTCCBTTTTBCC-CSEEEECGGGHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEEccCC----HHHHHHHHHhCcCcccCccc-cceEEecHHhHHH
Confidence            48999999 9999999999998886       8999999  6    44333221110000  0001 2345555  5567


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +++++|+||++...+                .+.++++.+.. .+++.+|+.++|..
T Consensus        68 ~~~~~D~vi~~v~~~----------------~~~~v~~~i~~-l~~~~~vv~~~ng~  107 (335)
T 1txg_A           68 CLENAEVVLLGVSTD----------------GVLPVMSRILP-YLKDQYIVLISKGL  107 (335)
T ss_dssp             HHTTCSEEEECSCGG----------------GHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred             HHhcCCEEEEcCChH----------------HHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence            789999999984221                23445556666 55788888888766

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.13  E-value=9e-06  Score=74.51  Aligned_cols=120  Identities=8%  Similarity=0.128  Sum_probs=70.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCc-cceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLL-VDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~-~~i~~~~~~~~al~~   83 (329)
                      +||.|+||+|++|++++..|++.|.       +|+.++++.+. ...+. ...++.... ..+. .++.-..+..+++++
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~-------~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   80 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGY-------AVNTTVRDPDN-QKKVS-HLLELQELGDLKIFRADLTDELSFEAPIAG   80 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTC-------EEEEEESCTTC-TTTTH-HHHHHGGGSCEEEEECCTTTSSSSHHHHTT
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCcch-hhhHH-HHHhcCCCCcEEEEecCCCChHHHHHHHcC
Confidence            6899999999999999999999887       89888776211 01111 111221100 0000 111111234567889


Q ss_pred             ccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          84 ANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +|+||++|+.......+ ..+.+..|+.....+++.+.+.. .-..||++|-.
T Consensus        81 ~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~  132 (338)
T 2rh8_A           81 CDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSA  132 (338)
T ss_dssp             CSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCH
T ss_pred             CCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecH
Confidence            99999998753211111 12367789999999999888752 22356666644

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=98.13  E-value=1.3e-05  Score=69.06  Aligned_cols=76  Identities=18%  Similarity=0.216  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|++++..|...+.       +|.++|++    ++                            ++++|
T Consensus        19 ~~~I~iiG~-G~mG~~la~~l~~~g~-------~V~~~~~~----~~----------------------------~~~~a   58 (209)
T 2raf_A           19 GMEITIFGK-GNMGQAIGHNFEIAGH-------EVTYYGSK----DQ----------------------------ATTLG   58 (209)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECTT----CC----------------------------CSSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEcCC----HH----------------------------HhccC
Confidence            479999998 9999999999999886       89999988    32                            56789


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      |+||++..  .              +.++++++.+..+.+ +++++.++|+.+
T Consensus        59 D~vi~av~--~--------------~~~~~v~~~l~~~~~-~~~vi~~~~g~~   94 (209)
T 2raf_A           59 EIVIMAVP--Y--------------PALAALAKQYATQLK-GKIVVDITNPLN   94 (209)
T ss_dssp             SEEEECSC--H--------------HHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred             CEEEEcCC--c--------------HHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence            99999832  1              234555556665554 778899999654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.12  E-value=2.6e-06  Score=78.41  Aligned_cols=178  Identities=12%  Similarity=0.053  Sum_probs=92.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceEeecCcccc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVSVHENPITA   80 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~~~~~~~~a   80 (329)
                      .+.+||.|+||+|++|++++..|++.|.-     .+|+.+|+...  ..... ...++... ...+ ..++.-.....++
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-----~~v~~~~~~~~--~~~~~-~l~~~~~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYET-----YKIINFDALTY--SGNLN-NVKSIQDHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTT-----EEEEEEECCCT--TCCGG-GGTTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCC-----cEEEEEecccc--ccchh-hhhhhccCCCeEEEEcCCCCHHHHHHH
Confidence            45689999999999999999999998731     17888887621  11111 11111100 0000 0011111123445


Q ss_pred             cCC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH----HHHHHHHCCCCCC
Q psy9582          81 FKD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN----TYITMKSAPDLSY  152 (329)
Q Consensus        81 l~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~----~~~~~~~~~~~~~  152 (329)
                      +++  +|+||++++.....  ..+....+..|+.....+++.+.+.. .. .+|.+|-..-.-    ...+.+.. ...+
T Consensus        94 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~-~~v~~SS~~vy~~~~~~~~~~E~~-~~~p  170 (346)
T 4egb_A           94 IKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HI-KLVQVSTDEVYGSLGKTGRFTEET-PLAP  170 (346)
T ss_dssp             HHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TS-EEEEEEEGGGGCCCCSSCCBCTTS-CCCC
T ss_pred             HhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CC-EEEEeCchHHhCCCCcCCCcCCCC-CCCC
Confidence            665  99999998864321  12344667899999999999999873 44 344444211000    00000011 1111


Q ss_pred             CcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         153 KNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       153 ~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      ....+.+-....++...+++..+++..-++...++|...
T Consensus       171 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          171 NSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence            122233333344555556666787766677666677543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=98.12  E-value=5.3e-06  Score=75.08  Aligned_cols=94  Identities=10%  Similarity=0.133  Sum_probs=64.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|..++..|...+.       +|.++|++    .++++.    +.+.      .+..+.+..++++++|
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~-------~V~~~~~~----~~~~~~----~~~~------g~~~~~~~~~~~~~~D   63 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGY-------SLVVSDRN----PEAIAD----VIAA------GAETASTAKAIAEQCD   63 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSC----HHHHHH----HHHT------TCEECSSHHHHHHHCS
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCC-------EEEEEeCC----HHHHHH----HHHC------CCeecCCHHHHHhCCC
Confidence            68999998 9999999999998886       89999998    444432    2211      1344556667888999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQG---KALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~---~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++...+               ..++.+.   +.+.+...++.+|+..+|-.
T Consensus        64 ~vi~~v~~~---------------~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~  102 (299)
T 1vpd_A           64 VIITMLPNS---------------PHVKEVALGENGIIEGAKPGTVLIDMSSIA  102 (299)
T ss_dssp             EEEECCSSH---------------HHHHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred             EEEEECCCH---------------HHHHHHHhCcchHhhcCCCCCEEEECCCCC
Confidence            999984321               1233333   34444445778888887643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.12  E-value=1.5e-06  Score=74.84  Aligned_cols=105  Identities=14%  Similarity=0.216  Sum_probs=68.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~~~~al~~a   84 (329)
                      |||.|+||+|++|++++..|++.|.       +|++++++    .+++... ..+.-    ...++.- ..+..++++++
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~~-~~~~~----~~~D~~d~~~~~~~~~~~~   64 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY-------QIYAGARK----VEQVPQY-NNVKA----VHFDVDWTPEEMAKQLHGM   64 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC-------EEEEEESS----GGGSCCC-TTEEE----EECCTTSCHHHHHTTTTTC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----ccchhhc-CCceE----EEecccCCHHHHHHHHcCC
Confidence            4899999999999999999999886       89999998    3332211 00000    0011111 12345678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+||.++|.....      .+..|+.....+++.+++.. .. .+|++|-
T Consensus        65 d~vi~~ag~~~~~------~~~~n~~~~~~l~~a~~~~~-~~-~iv~~SS  106 (219)
T 3dqp_A           65 DAIINVSGSGGKS------LLKVDLYGAVKLMQAAEKAE-VK-RFILLST  106 (219)
T ss_dssp             SEEEECCCCTTSS------CCCCCCHHHHHHHHHHHHTT-CC-EEEEECC
T ss_pred             CEEEECCcCCCCC------cEeEeHHHHHHHHHHHHHhC-CC-EEEEECc
Confidence            9999998875422      23456677778888887753 33 5555553

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=98.11  E-value=5e-06  Score=75.01  Aligned_cols=92  Identities=9%  Similarity=0.073  Sum_probs=64.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|..++..|+..|+       +|++||++    .++++..    .+.      .+..+++..+++++||
T Consensus         2 ~~I~iiG~-G~mG~~~a~~l~~~G~-------~V~~~dr~----~~~~~~~----~~~------g~~~~~~~~~~~~~ad   59 (287)
T 3pdu_A            2 TTYGFLGL-GIMGGPMAANLVRAGF-------DVTVWNRN----PAKCAPL----VAL------GARQASSPAEVCAACD   59 (287)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHHTC-------CEEEECSS----GGGGHHH----HHH------TCEECSCHHHHHHHCS
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHHH----HHC------CCeecCCHHHHHHcCC
Confidence            36999998 9999999999999887       89999999    5544422    211      2345567778889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQG---KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~---~~i~~~~~p~a~viv~tN  134 (329)
                      +||++...+               +.++++.   +.+.....++.+++..|+
T Consensus        60 vvi~~v~~~---------------~~~~~v~~~~~~l~~~l~~g~~vv~~st   96 (287)
T 3pdu_A           60 ITIAMLADP---------------AAAREVCFGANGVLEGIGGGRGYIDMST   96 (287)
T ss_dssp             EEEECCSSH---------------HHHHHHHHSTTCGGGTCCTTCEEEECSC
T ss_pred             EEEEEcCCH---------------HHHHHHHcCchhhhhcccCCCEEEECCC
Confidence            999984221               2344554   455555456777777765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.10  E-value=3.5e-06  Score=75.54  Aligned_cols=121  Identities=11%  Similarity=0.049  Sum_probs=70.7

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |+.+.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+..++
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   69 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGD-------TVIGTARR----TEALDDLVAAYPDRAEAISLDVTDGERIDVV   69 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESS----GGGGHHHHHHCTTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHhccCCceEEEeeCCCHHHHHHH
Confidence            444567899999999999999999999987       89999998    4444432222211000000011000111122


Q ss_pred             -------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 -------FKDANIAILIGSFPRK-S--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 -------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                             +.+.|+||+.||.... +  ..+   ....+..|+..    .+.+.+.+++.  ..+.||++|-
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~~iv~~sS  138 (281)
T 3m1a_A           70 AADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER--GSGSVVNISS  138 (281)
T ss_dssp             HHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEEcC
Confidence                   2378999999986421 1  122   33456677776    67777777765  3456777664

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=98.08  E-value=3e-05  Score=69.39  Aligned_cols=92  Identities=16%  Similarity=0.145  Sum_probs=64.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.+|+.++..|...+.       +|+++|++    .++++..    ...  ...  ...+++..++ +++|
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~-------~V~~~~~~----~~~~~~~----~~~--g~~--~~~~~~~~~~-~~~D   59 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGH-------YLIGVSRQ----QSTCEKA----VER--QLV--DEAGQDLSLL-QTAK   59 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHH----HHT--TSC--SEEESCGGGG-TTCS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHH----HhC--CCC--ccccCCHHHh-CCCC
Confidence            48999998 9999999999998886       89999998    4444321    111  110  1234566667 9999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +||++..  .              ..+.++++.+..+.+++++|+.+++
T Consensus        60 ~vi~av~--~--------------~~~~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           60 IIFLCTP--I--------------QLILPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             EEEECSC--H--------------HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             EEEEECC--H--------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence            9999832  1              2456666777776667888877754

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=98.07  E-value=1.5e-05  Score=71.56  Aligned_cols=92  Identities=12%  Similarity=0.103  Sum_probs=62.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|||+ |.+|..++..|.. |.       +|+++|++    .++++..    .+..      +..++ ..++++++|
T Consensus         2 ~~i~iiG~-G~~G~~~a~~l~~-g~-------~V~~~~~~----~~~~~~~----~~~g------~~~~~-~~~~~~~~D   57 (289)
T 2cvz_A            2 EKVAFIGL-GAMGYPMAGHLAR-RF-------PTLVWNRT----FEKALRH----QEEF------GSEAV-PLERVAEAR   57 (289)
T ss_dssp             CCEEEECC-STTHHHHHHHHHT-TS-------CEEEECSS----THHHHHH----HHHH------CCEEC-CGGGGGGCS
T ss_pred             CeEEEEcc-cHHHHHHHHHHhC-CC-------eEEEEeCC----HHHHHHH----HHCC------CcccC-HHHHHhCCC
Confidence            36999998 9999999999998 76       89999998    4444322    1111      11223 567788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +||++...+               ..++++.+.+.+...++.+|+..+|..
T Consensus        58 ~vi~~v~~~---------------~~~~~v~~~l~~~l~~~~~vv~~s~~~   93 (289)
T 2cvz_A           58 VIFTCLPTT---------------REVYEVAEALYPYLREGTYWVDATSGE   93 (289)
T ss_dssp             EEEECCSSH---------------HHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred             EEEEeCCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            999984221               124445566666555788888888754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.06  E-value=4.7e-06  Score=73.91  Aligned_cols=123  Identities=15%  Similarity=0.194  Sum_probs=70.7

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      ||.+  .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+..
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   70 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGA-------TVAIADID----IERARQAAAEIGPAAYAVQMDVTRQDSID   70 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCTTEEEEECCTTCHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCCceEEEeeCCCHHHHH
Confidence            5543  47899999999999999999999987       89999998    44454433333211000000111001111


Q ss_pred             c-------ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 T-------AFKDANIAILIGSFPRKS---NME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ~-------al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +       .+.+.|++|+.+|.....   ..+   ....+..|+....    ...+.+.+.. +.+.||+++-.
T Consensus        71 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~  143 (259)
T 4e6p_A           71 AAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG-RGGKIINMASQ  143 (259)
T ss_dssp             HHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCG
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEECCh
Confidence            2       233789999999874321   112   3344566765444    4445554432 36777777643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.05  E-value=4.7e-06  Score=72.64  Aligned_cols=115  Identities=11%  Similarity=0.178  Sum_probs=73.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|.|+||+|++|++++..|+..|...     +|+++|++.    +.+.....  .... ....++.-..+..+++++.
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~-----~V~~~~r~~----~~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~   85 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFS-----KVTLIGRRK----LTFDEEAY--KNVN-QEVVDFEKLDDYASAFQGH   85 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCS-----EEEEEESSC----CCCCSGGG--GGCE-EEECCGGGGGGGGGGGSSC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCC-----EEEEEEcCC----CCcccccc--CCce-EEecCcCCHHHHHHHhcCC
Confidence            4689999999999999999999988643     799999983    22221110  0000 0001111113445678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+||+++|.... .......+..|+.....+++.+.+.. . ..||++|-
T Consensus        86 d~vi~~ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~-~-~~iv~~SS  132 (242)
T 2bka_A           86 DVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGG-C-KHFNLLSS  132 (242)
T ss_dssp             SEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTT-C-CEEEEECC
T ss_pred             CEEEECCCcccc-cCCcccceeeeHHHHHHHHHHHHHCC-C-CEEEEEcc
Confidence            999999886421 11234566778888888988888753 3 35555553

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.05  E-value=4.6e-05  Score=69.97  Aligned_cols=111  Identities=13%  Similarity=0.106  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecC-ccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HEN-PITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~-~~~al   81 (329)
                      ++++|.|+||+|++|++++..|+..|.       +|+++|++.    ........++..     ..++.+ ..| ..+++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~   89 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGH-------EVTVVDNFF----TGRKRNVEHWIG-----HENFELINHDVVEPLY   89 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS----SCCGGGTGGGTT-----CTTEEEEECCTTSCCC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCC-------EEEEEeCCC----ccchhhhhhhcc-----CCceEEEeCccCChhh
Confidence            357999999999999999999999886       899999872    111111111110     011221 112 23467


Q ss_pred             CCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .++|+||++++.....  ..+....+..|+.....+++.+.+.. .  .+|++|
T Consensus        90 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~S  140 (343)
T 2b69_A           90 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A--RLLLAS  140 (343)
T ss_dssp             CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C--EEEEEE
T ss_pred             cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C--cEEEEC
Confidence            8999999998764311  12445667889999999999998863 3  555554

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=98.04  E-value=3.7e-06  Score=79.66  Aligned_cols=99  Identities=12%  Similarity=0.067  Sum_probs=62.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEe---cCCcccccchhhhHhhhh---hc-ccCC-----ccceE
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLE---ASNKKSQKAIKGVIMEIE---DC-IFPL-----LVDVS   72 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D---~~~~~~~~~~~~~~~dl~---~~-~~~~-----~~~i~   72 (329)
                      |||+|||+ |.+|..++..|+. .|.       +|.++|   ++    .++++.......   .. ..+.     ...+.
T Consensus         3 mkI~ViGa-G~~G~~~a~~La~~~G~-------~V~~~~~~~r~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   70 (404)
T 3c7a_A            3 VKVCVCGG-GNGAHTLSGLAASRDGV-------EVRVLTLFADE----AERWTKALGADELTVIVNEKDGTQTEVKSRPK   70 (404)
T ss_dssp             EEEEEECC-SHHHHHHHHHHTTSTTE-------EEEEECCSTTH----HHHHHHHHTTSCEEEEEECSSSCEEEEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHhCCCC-------EEEEEeCCCCc----HHHHHHHHhhccceeeeecCCCccceeeccce
Confidence            58999999 9999999999987 476       899999   54    333332111000   00 0000     01222


Q ss_pred             -eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE
Q psy9582          73 -VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV  132 (329)
Q Consensus        73 -~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~  132 (329)
                       ++++..++++++|+||++...                ...+++++.+..+..++.+|+..
T Consensus        71 ~~~~~~~~a~~~aD~Vilav~~----------------~~~~~v~~~l~~~l~~~~ivv~~  115 (404)
T 3c7a_A           71 VITKDPEIAISGADVVILTVPA----------------FAHEGYFQAMAPYVQDSALIVGL  115 (404)
T ss_dssp             EEESCHHHHHTTCSEEEECSCG----------------GGHHHHHHHHTTTCCTTCEEEET
T ss_pred             EEeCCHHHHhCCCCEEEEeCch----------------HHHHHHHHHHHhhCCCCcEEEEc
Confidence             556766789999999998321                12456777888877677776653

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.04  E-value=5.3e-06  Score=73.51  Aligned_cols=123  Identities=10%  Similarity=-0.006  Sum_probs=77.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPI   78 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~   78 (329)
                      .+.++|.|+||+|++|.+++..|++ .|.       +|++++++    .++++....++........   .++.-..+..
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~   70 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-------DVVLTARD----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIR   70 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-------EEEEEESS----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCC-------eEEEEeCC----hHHHHHHHHHHHhcCCeeEEEECCCCCHHHHH
Confidence            3457899999999999999999999 887       89999998    4444433334432110000   0110001111


Q ss_pred             ccc-------CCccEEEEeCCCCCCCC--C----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          79 TAF-------KDANIAILIGSFPRKSN--M----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        79 ~al-------~~aDiVi~~~g~~~~~g--~----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +++       .+.|+||+++|......  .    .....+..|+.....+.+.+.+...+.+.||++|--.
T Consensus        71 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~  141 (276)
T 1wma_A           71 ALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  141 (276)
T ss_dssp             HHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             HHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChh
Confidence            222       27899999988653221  1    1234577888888888888887743345777776543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.04  E-value=6e-06  Score=73.51  Aligned_cols=102  Identities=21%  Similarity=0.221  Sum_probs=73.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-----hHhhhhhcccCCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-----VIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-----~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ++|.|+||+|++|++++..|+..|.       +|++.|+++    .+..+     ...|+.+           ..+..++
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~Dl~d-----------~~~~~~~   61 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAE-------ILRLADLSP----LDPAGPNEECVQCDLAD-----------ANAVNAM   61 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEE-------EEEEEESSC----CCCCCTTEEEEECCTTC-----------HHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC-------EEEEEecCC----ccccCCCCEEEEcCCCC-----------HHHHHHH
Confidence            5799999999999999999999886       899999982    22221     1122221           1234566


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +++.|+||+++|...  .......+..|+.....+.+.+.+.. .. .||++|
T Consensus        62 ~~~~D~vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~-~~-~iv~~S  110 (267)
T 3rft_A           62 VAGCDGIVHLGGISV--EKPFEQILQGNIIGLYNLYEAARAHG-QP-RIVFAS  110 (267)
T ss_dssp             HTTCSEEEECCSCCS--CCCHHHHHHHHTHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             HcCCCEEEECCCCcC--cCCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEc
Confidence            789999999998742  23456778899999999999998863 33 455554

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=98.03  E-value=2e-05  Score=72.11  Aligned_cols=96  Identities=8%  Similarity=0.077  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.+||+|||+ |.+|..++..|...|. .     +|+++|++.  ++++.+    .+.+.      .+..+++..+++++
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~-~-----~V~~~dr~~--~~~~~~----~~~~~------g~~~~~~~~e~~~~   83 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGA-I-----DMAAYDAAS--AESWRP----RAEEL------GVSCKASVAEVAGE   83 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSC-C-----EEEEECSSC--HHHHHH----HHHHT------TCEECSCHHHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC-C-----eEEEEcCCC--CHHHHH----HHHHC------CCEEeCCHHHHHhc
Confidence            3579999998 9999999999998875 2     799999961  012222    12211      23455667788999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ||+||++...+.                ..++++.+.+...++.+||..|+
T Consensus        84 aDvVi~~vp~~~----------------~~~~~~~l~~~l~~~~ivvd~st  118 (312)
T 3qsg_A           84 CDVIFSLVTAQA----------------ALEVAQQAGPHLCEGALYADFTS  118 (312)
T ss_dssp             CSEEEECSCTTT----------------HHHHHHHHGGGCCTTCEEEECCC
T ss_pred             CCEEEEecCchh----------------HHHHHHhhHhhcCCCCEEEEcCC
Confidence            999999843221                11233556666657777776653

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=98.03  E-value=2.3e-05  Score=75.94  Aligned_cols=102  Identities=10%  Similarity=0.083  Sum_probs=70.0

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |+ .+||+|||+ |.+|++++..|...|.       +|.++|++    .++++.......      ...+..+.+..+++
T Consensus         3 m~-~~~IgvIG~-G~mG~~lA~~L~~~G~-------~V~v~dr~----~~~~~~l~~~~~------~~gi~~~~s~~e~v   63 (474)
T 2iz1_A            3 MA-QANFGVVGM-AVMGKNLALNVESRGY-------TVAIYNRT----TSKTEEVFKEHQ------DKNLVFTKTLEEFV   63 (474)
T ss_dssp             CT-TBSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHHHHHHTT------TSCEEECSSHHHHH
T ss_pred             CC-CCcEEEEee-HHHHHHHHHHHHhCCC-------EEEEEcCC----HHHHHHHHHhCc------CCCeEEeCCHHHHH
Confidence            44 378999998 9999999999999887       89999998    554443322111      01355556666665


Q ss_pred             CC---ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          82 KD---ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        82 ~~---aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      ++   +|+||++...+               ..++++++.+.....++.+||..+|-..
T Consensus        64 ~~l~~aDvVilavp~~---------------~~v~~vl~~l~~~l~~g~iiId~s~~~~  107 (474)
T 2iz1_A           64 GSLEKPRRIMLMVQAG---------------AATDATIKSLLPLLDIGDILIDGGNTHF  107 (474)
T ss_dssp             HTBCSSCEEEECCCTT---------------HHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred             hhccCCCEEEEEccCc---------------hHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence            55   99999983221               2345555677776667778888887653

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=98.02  E-value=6.6e-05  Score=67.23  Aligned_cols=96  Identities=17%  Similarity=0.189  Sum_probs=63.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-Cc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-DA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-~a   84 (329)
                      +||+|||+ |.+|..++..|...|...     +|+++|++    .++++.    +...  ...  ...+++..++++ ++
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~-----~V~~~d~~----~~~~~~----~~~~--g~~--~~~~~~~~~~~~~~a   63 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKG-----KIYGYDIN----PESISK----AVDL--GII--DEGTTSIAKVEDFSP   63 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCS-----EEEEECSC----HHHHHH----HHHT--TSC--SEEESCGGGGGGTCC
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCc-----EEEEEeCC----HHHHHH----HHHC--CCc--ccccCCHHHHhcCCC
Confidence            47999998 999999999999877522     79999998    444432    1111  111  123456667888 99


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+||++..  .              ....++++.+..+.+++++|+.++|.
T Consensus        64 DvVilavp--~--------------~~~~~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           64 DFVMLSSP--V--------------RTFREIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             SEEEECSC--H--------------HHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             CEEEEcCC--H--------------HHHHHHHHHHHhhCCCCcEEEECCCC
Confidence            99999832  1              12334555555555577787777663

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=98.02  E-value=7e-06  Score=74.05  Aligned_cols=93  Identities=9%  Similarity=0.063  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||+|||+ |.+|+.++..|...|.       +|+++| +    .++++..    .+.      .+....+..++++++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~-------~V~~~~-~----~~~~~~~----~~~------g~~~~~~~~~~~~~~   59 (295)
T 1yb4_A            3 AMKLGFIGL-GIMGSPMAINLARAGH-------QLHVTT-I----GPVADEL----LSL------GAVNVETARQVTEFA   59 (295)
T ss_dssp             -CEEEECCC-STTHHHHHHHHHHTTC-------EEEECC-S----SCCCHHH----HTT------TCBCCSSHHHHHHTC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCC-------EEEEEc-C----HHHHHHH----HHc------CCcccCCHHHHHhcC
Confidence            368999998 9999999999998886       899999 8    4444422    111      122335566778899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGK---ALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~---~i~~~~~p~a~viv~tNP  135 (329)
                      |+||++...+               ..++.+..   .+.+...++.+|+..+|-
T Consensus        60 D~vi~~vp~~---------------~~~~~v~~~~~~l~~~l~~~~~vv~~s~~   98 (295)
T 1yb4_A           60 DIIFIMVPDT---------------PQVEDVLFGEHGCAKTSLQGKTIVDMSSI   98 (295)
T ss_dssp             SEEEECCSSH---------------HHHHHHHHSTTSSTTSCCTTEEEEECSCC
T ss_pred             CEEEEECCCH---------------HHHHHHHhCchhHhhcCCCCCEEEECCCC
Confidence            9999984221               12344444   455555567777777764

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=98.01  E-value=3.2e-05  Score=73.81  Aligned_cols=114  Identities=13%  Similarity=0.147  Sum_probs=74.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEee
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVH   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~   74 (329)
                      ..|..|||. |+||..+|..|++.|+       +|+.||++    +++.+...........+.          ..+++.+
T Consensus        11 ~~~~~ViGl-GyvGlp~A~~La~~G~-------~V~~~D~~----~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t   78 (431)
T 3ojo_A           11 GSKLTVVGL-GYIGLPTSIMFAKHGV-------DVLGVDIN----QQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS   78 (431)
T ss_dssp             -CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred             CCccEEEee-CHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe
Confidence            479999998 9999999999999998       99999999    555553322110000010          1357777


Q ss_pred             cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchhh
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNT  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~  138 (329)
                      ++    +++||+||++.+.|......+    ..++..+++.++.+.++.+++.+||..| -|.+.
T Consensus        79 td----~~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgt  135 (431)
T 3ojo_A           79 TT----PEASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPKT  135 (431)
T ss_dssp             SS----CCCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTH
T ss_pred             Cc----hhhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChhH
Confidence            76    358999999987776432000    1233566667778888776777776665 45543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.01  E-value=6.1e-06  Score=75.52  Aligned_cols=173  Identities=12%  Similarity=0.041  Sum_probs=92.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC--CCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD--LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~--~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al   81 (329)
                      |||.|+||+|++|++++..|+..|  .       +|+.+|++..  ....+. ..++.... ... ..++.-.....+++
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~-------~V~~~~r~~~--~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDW-------EVINIDKLGY--GSNPAN-LKDLEDDPRYTFVKGDVADYELVKELV   73 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTC-------EEEEEECCCT--TCCGGG-GTTTTTCTTEEEEECCTTCHHHHHHHH
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCC-------EEEEEecCcc--cCchhH-HhhhccCCceEEEEcCCCCHHHHHHHh
Confidence            689999999999999999999875  4       8999998621  111111 11111100 000 00110011233456


Q ss_pred             CCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh--H-HHHHHHHCCCCCCCcEE
Q psy9582          82 KDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT--N-TYITMKSAPDLSYKNFT  156 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~--~-~~~~~~~~~~~~~~~i~  156 (329)
                      .++|+||++++.....  ..+....+..|+.....+++.+.+.. ....||++|-..-.  . ...+.+.. ..++....
T Consensus        74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~-~~~~~~~Y  151 (336)
T 2hun_A           74 RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDILKGSFTEND-RLMPSSPY  151 (336)
T ss_dssp             HTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCCSSSCBCTTB-CCCCCSHH
T ss_pred             hCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCCCCCCcCCCC-CCCCCCcc
Confidence            7899999998864310  12344567889999999999998873 43456555532100  0 00000001 11121122


Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      +.+-....++...+++.++++..-++...|.|..
T Consensus       152 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          152 SATKAASDMLVLGWTRTYNLNASITRCTNNYGPY  185 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTT
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcC
Confidence            2333333445555666667665555555456654

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=98.00  E-value=6e-06  Score=74.86  Aligned_cols=99  Identities=14%  Similarity=0.147  Sum_probs=65.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc-CCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF-KDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al-~~a   84 (329)
                      +||+|||+ |.+|+.++..|.+.|.       +|.++|++    .+.++.     .... .. ....++.+..+++ +++
T Consensus         3 mkI~iiGa-Ga~G~~~a~~L~~~g~-------~V~~~~r~----~~~~~~-----~~~~-g~-~~~~~~~~~~~~~~~~~   63 (294)
T 3g17_A            3 LSVAIIGP-GAVGTTIAYELQQSLP-------HTTLIGRH----AKTITY-----YTVP-HA-PAQDIVVKGYEDVTNTF   63 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHCT-------TCEEEESS----CEEEEE-----ESST-TS-CCEEEEEEEGGGCCSCE
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEEec----cCcEEE-----EecC-Ce-eccceecCchHhcCCCC
Confidence            57999999 9999999999998886       79999998    333321     1111 11 1122333445555 899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      |+||++.    |+            ..++++++.++.+..++..|+.+.|-.+..
T Consensus        64 D~vilav----k~------------~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~  102 (294)
T 3g17_A           64 DVIIIAV----KT------------HQLDAVIPHLTYLAHEDTLIILAQNGYGQL  102 (294)
T ss_dssp             EEEEECS----CG------------GGHHHHGGGHHHHEEEEEEEEECCSSCCCG
T ss_pred             CEEEEeC----Cc------------cCHHHHHHHHHHhhCCCCEEEEeccCcccH
Confidence            9999973    11            134455566666655678888999987654

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=98.00  E-value=2.2e-05  Score=76.16  Aligned_cols=102  Identities=13%  Similarity=0.178  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK---   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~---   82 (329)
                      |||+|||+ |.||+.++..|...|.       +|.++|++    .++++.........  +...++..+.+..++++   
T Consensus         2 MkIgVIG~-G~mG~~lA~~La~~G~-------~V~v~dr~----~~~~~~l~~~~g~~--~~~~~i~~~~~~~e~v~~l~   67 (478)
T 1pgj_A            2 MDVGVVGL-GVMGANLALNIAEKGF-------KVAVFNRT----YSKSEEFMKANASA--PFAGNLKAFETMEAFAASLK   67 (478)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHHHHHHTTTS--TTGGGEEECSCHHHHHHHBC
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHhcCCC--CCCCCeEEECCHHHHHhccc
Confidence            58999998 9999999999999887       89999998    55544332211100  11123556666656555   


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ++|+||++...+               ..++++++.+..+..++.+||..+|-.
T Consensus        68 ~aDvVilaVp~~---------------~~v~~vl~~l~~~l~~g~iIId~sng~  106 (478)
T 1pgj_A           68 KPRKALILVQAG---------------AATDSTIEQLKKVFEKGDILVDTGNAH  106 (478)
T ss_dssp             SSCEEEECCCCS---------------HHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred             CCCEEEEecCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            599999983221               134445556666655777888888754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.99  E-value=8.8e-06  Score=74.41  Aligned_cols=118  Identities=9%  Similarity=-0.054  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhc-ccCC-ccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDC-IFPL-LVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~-~~~~-~~~i~~~~~~~~al   81 (329)
                      .+||.|+||+|++|++++..|+..|.       +|+++|++.    .... ....++... .... ..++.-..+..+++
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   82 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGY-------RVHGLVARR----SSDTRWRLRELGIEGDIQYEDGDMADACSVQRAV   82 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCC----SSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCC----ccccccchhhccccCceEEEECCCCCHHHHHHHH
Confidence            47999999999999999999999886       899999972    2111 111111100 0000 00110011223455


Q ss_pred             CC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++  .|+||++++.....  ..+....+..|+.....+++.+.+.. ....+|.+|-
T Consensus        83 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS  138 (335)
T 1rpn_A           83 IKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQAST  138 (335)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEE
T ss_pred             HHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeC
Confidence            54  59999998864311  23455677889999999999998863 3245555553

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.99  E-value=4.9e-06  Score=73.83  Aligned_cols=107  Identities=16%  Similarity=0.177  Sum_probs=71.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      ++|.|+||+|++|++++..|+..|.       +|++++++.    .....  ... +   ....++.-.....+++++.|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~--~~~-~---~~~~Dl~d~~~~~~~~~~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAH-------EVRLSDIVD----LGAAE--AHE-E---IVACDLADAQAVHDLVKDCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEE-------EEEECCSSC----CCCCC--TTE-E---ECCCCTTCHHHHHHHHTTCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCCC----ccccC--CCc-c---EEEccCCCHHHHHHHHcCCC
Confidence            3799999999999999999998876       899999982    21100  000 0   00011111123456788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++++..  ...+....+..|+.....+++.+.+.. .. .||++|
T Consensus        66 ~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~iv~~S  109 (267)
T 3ay3_A           66 GIIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLG-KP-RIVFAS  109 (267)
T ss_dssp             EEEECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             EEEECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEeC
Confidence            999998865  223456677889999999999888753 33 444544

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.99  E-value=1.1e-05  Score=73.42  Aligned_cols=112  Identities=17%  Similarity=0.192  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.++|.|+||+|++|++++..|+..|.       +|+++|++.    .. ..  ..+.-.    ..++.-..+..+++++
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~----~~-~~--l~~~~~----~~Dl~d~~~~~~~~~~   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNV-------EVFGTSRNN----EA-KL--PNVEMI----SLDIMDSQRVKKVISD   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCT----TC-CC--TTEEEE----ECCTTCHHHHHHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCC-------EEEEEecCC----cc-cc--ceeeEE----ECCCCCHHHHHHHHHh
Confidence            458999999999999999999999886       899999982    21 10  011000    0011001122344554


Q ss_pred             --ccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 --ANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 --aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                        .|+||++++....  ...+....+..|+.....+++.+.+.. ....+|++|-
T Consensus        73 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS  126 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSN-LDCRILTIGS  126 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEEEE
T ss_pred             cCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcc
Confidence              8999999886431  122456677889999999999997652 3345555553

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=97.99  E-value=1.3e-05  Score=72.85  Aligned_cols=108  Identities=13%  Similarity=0.146  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhC-----C-CCCCCCCceEEEEecCCcccccchhhhHh--hhhhcccC---Ccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANG-----D-LLGKDQPIILQLLEASNKKSQKAIKGVIM--EIEDCIFP---LLV   69 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~-----~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~--dl~~~~~~---~~~   69 (329)
                      |..++|||+|||+ |.+|+.++..|.+.     | .       +|+++|+.     ++++....  -+.-....   ...
T Consensus         4 m~~~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~-------~V~~~~r~-----~~~~~l~~~~g~~~~~~~~~~~~~   70 (317)
T 2qyt_A            4 MNQQPIKIAVFGL-GGVGGYYGAMLALRAAATDGLL-------EVSWIARG-----AHLEAIRAAGGLRVVTPSRDFLAR   70 (317)
T ss_dssp             ---CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSE-------EEEEECCH-----HHHHHHHHHTSEEEECSSCEEEEC
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHhCccccCCCC-------CEEEEEcH-----HHHHHHHhcCCeEEEeCCCCeEEe
Confidence            3345579999998 99999999999987     7 6       89999873     12221111  00000000   001


Q ss_pred             ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      .+..+++ .++++++|+||++....                .+.++++.+..+..++..||.++|..+.
T Consensus        71 ~~~~~~~-~~~~~~~D~vil~vk~~----------------~~~~v~~~i~~~l~~~~~iv~~~nG~~~  122 (317)
T 2qyt_A           71 PTCVTDN-PAEVGTVDYILFCTKDY----------------DMERGVAEIRPMIGQNTKILPLLNGADI  122 (317)
T ss_dssp             CSEEESC-HHHHCCEEEEEECCSSS----------------CHHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred             cceEecC-ccccCCCCEEEEecCcc----------------cHHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence            2334444 45678999999984221                1244556666665467778888887654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.99  E-value=3.3e-05  Score=71.41  Aligned_cols=111  Identities=15%  Similarity=0.129  Sum_probs=71.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-   82 (329)
                      .++|.|+||+|++|++++..|+..| .       +|++++++.    ....  ...+...  ....++.-.....++++ 
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~-------~V~~~~r~~----~~~~--~~~~~~~--~~~~d~~~~~~~~~~~~~  110 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGIT-------DILVVDNLK----DGTK--FVNLVDL--NIADYMDKEDFLIQIMAG  110 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCC-------CEEEEECCS----SGGG--GGGTTTS--CCSEEEEHHHHHHHHHTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCc-------EEEEEecCC----Ccch--hhcccCc--eEeeecCcHHHHHHHHhh
Confidence            3789999999999999999999988 5       799999872    2110  0011111  01112211122233444 


Q ss_pred             ----CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 ----DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ----~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                          ++|+||++++.......+....+..|+.....+++.+.+.. .  .+|.+|
T Consensus       111 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~--r~V~~S  162 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYAS  162 (357)
T ss_dssp             CCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C--CEEEEE
T ss_pred             cccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEc
Confidence                59999999886543334566778899999999999998864 4  444444

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.98  E-value=1.2e-05  Score=73.56  Aligned_cols=114  Identities=18%  Similarity=0.133  Sum_probs=70.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--   82 (329)
                      .++|.|+||+|++|++++..|+..|.       +|+++|++.    ........++.... ....++.-..+..++++  
T Consensus        20 ~~~vlVTGasG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~l~~v~-~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           20 HMRILITGGAGCLGSNLIEHWLPQGH-------EILVIDNFA----TGKREVLPPVAGLS-VIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHGGGTC-------EEEEEECCS----SSCGGGSCSCTTEE-EEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCC----ccchhhhhccCCce-EEEeeCCCHHHHHHHHhhc
Confidence            47999999999999999999999886       899999962    11110000110000 00001110112344566  


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.|+||++++..........+ +..|+.....+++.+.+.. .. .||++|
T Consensus        88 ~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~-~~-~iV~~S  135 (330)
T 2pzm_A           88 KPTHVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAG-VK-RLLNFQ  135 (330)
T ss_dssp             CCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHT-CS-EEEEEE
T ss_pred             CCCEEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcC-CC-EEEEec
Confidence            899999998865422112223 7789999999999888753 33 555554

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.96  E-value=3e-05  Score=70.16  Aligned_cols=114  Identities=18%  Similarity=0.114  Sum_probs=67.7

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      ||++  ++||.|+||+|++|++++..|+..|.       +|+.++++.........    .+.+.. . ...++.   ..
T Consensus         1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~----~~~~~~-~-~~~~~~---~~   64 (321)
T 3vps_A            1 MQRNTLKHRILITGGAGFIGGHLARALVASGE-------EVTVLDDLRVPPMIPPE----GTGKFL-E-KPVLEL---EE   64 (321)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTC-------CEEEECCCSSCCSSCCT----TSSEEE-C-SCGGGC---CH
T ss_pred             CCcccCCCeEEEECCCChHHHHHHHHHHHCCC-------EEEEEecCCcccccchh----hhhhhc-c-CCCeeE---Ee
Confidence            5532  57999999999999999999999886       89999997210000111    111100 0 001111   12


Q ss_pred             cccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          79 TAFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .++.++|+||++++.....  .....+.+. |+...+.+++.+.+.. .. .+|.+|
T Consensus        65 ~Dl~~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~-~~v~~S  118 (321)
T 3vps_A           65 RDLSDVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VP-KVVVGS  118 (321)
T ss_dssp             HHHTTEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CC-EEEEEE
T ss_pred             CccccCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CC-eEEEec
Confidence            3444899999998764310  111222345 9999999999998874 44 444444

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=97.96  E-value=4e-05  Score=68.99  Aligned_cols=109  Identities=15%  Similarity=0.128  Sum_probs=71.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC--
Q psy9582           7 RISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD--   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~--   83 (329)
                      ||.|+||+|++|++++..|+..| .       +|++++++.    ....  ..++...  ....++.-.....+++++  
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~-------~V~~~~r~~----~~~~--~~~~~~~--~~~~d~~~~~~~~~~~~~~~   65 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT-------DILVVDNLK----DGTK--FVNLVDL--NIADYMDKEDFLIQIMAGEE   65 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC-------CEEEEECCS----SGGG--GHHHHTS--CCSEEEEHHHHHHHHHTTCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc-------EEEEEccCC----CCch--hhhcCcc--eeccccccHHHHHHHHhccc
Confidence            58999999999999999999988 4       799999872    2111  0111111  011122211223345554  


Q ss_pred             ---ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ---ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 ---aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                         +|+||++++.......+....+..|+.....+++.+.+.. .  .+|.+|
T Consensus        66 ~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~S  115 (310)
T 1eq2_A           66 FGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYAS  115 (310)
T ss_dssp             CSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C--CEEEEE
T ss_pred             cCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEe
Confidence               9999999886543334566778899999999999998874 4  444544

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.96  E-value=1.1e-05  Score=73.60  Aligned_cols=65  Identities=12%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|..++..|...|+       +|++||++    .++++.    +.+.      .+....+..+++++|
T Consensus         9 ~~~IgiIG~-G~mG~~~A~~l~~~G~-------~V~~~dr~----~~~~~~----~~~~------g~~~~~~~~e~~~~a   66 (306)
T 3l6d_A            9 EFDVSVIGL-GAMGTIMAQVLLKQGK-------RVAIWNRS----PGKAAA----LVAA------GAHLCESVKAALSAS   66 (306)
T ss_dssp             SCSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHH----HHHH------TCEECSSHHHHHHHS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH----HHHC------CCeecCCHHHHHhcC
Confidence            479999998 9999999999999987       89999998    444432    2221      133446677889999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+||++.
T Consensus        67 DvVi~~v   73 (306)
T 3l6d_A           67 PATIFVL   73 (306)
T ss_dssp             SEEEECC
T ss_pred             CEEEEEe
Confidence            9999973

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.96  E-value=1.3e-05  Score=73.41  Aligned_cols=117  Identities=14%  Similarity=0.048  Sum_probs=72.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-hHhhhhhc-ccC-CccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-VIMEIEDC-IFP-LLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-~~~dl~~~-~~~-~~~~i~~~~~~~~al   81 (329)
                      .++|.|+||+|++|++++..|++.|.       +|+++|++    ...... ...++... ... ...++.-..+..+++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-------EVYGADRR----SGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTI   71 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECSC----CSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEECC----CcccccccHhhccccCceeEEECCCCCHHHHHHHH
Confidence            36899999999999999999999886       89999998    222211 11111100 000 001111111223455


Q ss_pred             CC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++  .|+||++++.....  ..+....+..|+.....+++.+.+.. ....+|++|
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~S  126 (345)
T 2z1m_A           72 EKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQAS  126 (345)
T ss_dssp             HHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEE
T ss_pred             HhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEe
Confidence            54  49999998864311  23455677889999999999888763 334555554

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.95  E-value=2e-05  Score=69.35  Aligned_cols=154  Identities=15%  Similarity=0.121  Sum_probs=86.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc--
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI--   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~--   78 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.......   ..+++-..+..  
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-------AVVVADIN----AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            457899999999999999999999987       89999998    555554444443221000   00110001111  


Q ss_pred             -----cccCCccEEEEeCCCCC----C--CCCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582          79 -----TAFKDANIAILIGSFPR----K--SNME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNPVNTNT  140 (329)
Q Consensus        79 -----~al~~aDiVi~~~g~~~----~--~g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP~~~~~  140 (329)
                           +.+...|++|+.+|...    .  ...+   ....+..|+..    .+.+.+.+.+.  ..+.||+++-....  
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~--  152 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR--GGGAIVNQSSTAAW--  152 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEEEECC------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCCEEEEECCcccc--
Confidence                 12337899999998631    1  1122   33456677766    66666666664  35677777754322  


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                                +.....+.+-.....+...++..++  +..|+..
T Consensus       153 ----------~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~  184 (253)
T 3qiv_A          153 ----------LYSNYYGLAKVGINGLTQQLSRELG--GRNIRIN  184 (253)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHTT--TTTEEEE
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHh--hcCeEEE
Confidence                      0111223333333456777777775  4456644

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.95  E-value=1.6e-05  Score=70.27  Aligned_cols=121  Identities=14%  Similarity=0.109  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc--
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF--   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al--   81 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.........++.-..+..+++  
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-------SAVLLDLP----NSGGEAQAKKLGNNCVFAPADVTSEKDVQTALAL   79 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECT----TSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----cHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence            347899999999999999999999987       89999998    44444332222110000000110001112223  


Q ss_pred             -----CCccEEEEeCCCCCCCC---------CC---HHHHHHHHHHHHHHHHHHHhhhcC--------CCeEEEEEcCc
Q psy9582          82 -----KDANIAILIGSFPRKSN---------ME---RSELLAINSSIFIEQGKALNSVAS--------RDVKVLVVGNP  135 (329)
Q Consensus        82 -----~~aDiVi~~~g~~~~~g---------~~---~~~~~~~n~~~~~~i~~~i~~~~~--------p~a~viv~tNP  135 (329)
                           ...|+||+.+|......         .+   ....+..|+.....+.+.+.++..        ..+.||+++-.
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           80 AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence                 37899999988643211         12   334556677666555555444321        24567777643

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=97.94  E-value=1.1e-05  Score=73.97  Aligned_cols=118  Identities=11%  Similarity=0.115  Sum_probs=73.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~~   83 (329)
                      +||.|+||+|++|++++..|+..|.       +|+++|++.   .........++.... ... ..++.-..+..+++++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~---~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGI-------DLIVFDNLS---RKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCC---STTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCC-------EEEEEeCCC---ccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc
Confidence            3799999999999999999999886       899999751   111111111222110 000 0011111123445666


Q ss_pred             --ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 --ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 --aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                        .|+||++++.....  ..+....+..|+.....+++.+.+.. ..+.||++|-
T Consensus        72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS  125 (347)
T 1orr_A           72 YMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSST  125 (347)
T ss_dssp             HCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEE
T ss_pred             cCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEecc
Confidence              99999998864310  12345667889999999999999875 4445666653

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=97.94  E-value=3.8e-05  Score=74.78  Aligned_cols=100  Identities=9%  Similarity=0.070  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD-   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~-   83 (329)
                      +.||+|||+ |.||++++..|+..|.       +|+++|++    .++++.....   .. + ...+..+.+..+++++ 
T Consensus        10 ~~~IgvIGl-G~MG~~lA~~La~~G~-------~V~v~dr~----~~~~~~l~~~---~~-~-~~gi~~~~s~~e~v~~l   72 (497)
T 2p4q_A           10 SADFGLIGL-AVMGQNLILNAADHGF-------TVCAYNRT----QSKVDHFLAN---EA-K-GKSIIGATSIEDFISKL   72 (497)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----SHHHHHHHHT---TT-T-TSSEECCSSHHHHHHTS
T ss_pred             CCCEEEEee-HHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHcc---cc-c-CCCeEEeCCHHHHHhcC
Confidence            468999999 9999999999999987       89999998    5544422210   10 0 0135555666666665 


Q ss_pred             --ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          84 --ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        84 --aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                        +|+||++...+               ..++++++.+..+..|+.+||..+|-.
T Consensus        73 ~~aDvVil~Vp~~---------------~~v~~vl~~l~~~l~~g~iIId~s~~~  112 (497)
T 2p4q_A           73 KRPRKVMLLVKAG---------------APVDALINQIVPLLEKGDIIIDGGNSH  112 (497)
T ss_dssp             CSSCEEEECCCSS---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             CCCCEEEEEcCCh---------------HHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence              99999983221               245566677777776778888888743

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=97.94  E-value=3.5e-05  Score=70.29  Aligned_cols=120  Identities=10%  Similarity=0.029  Sum_probs=70.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.+|+.++..|. .+.       +|.+++++    .++++....+--....+............++..++|
T Consensus         3 mkI~IiGa-Ga~G~~~a~~L~-~g~-------~V~~~~r~----~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D   69 (307)
T 3ego_A            3 LKIGIIGG-GSVGLLCAYYLS-LYH-------DVTVVTRR----QEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFD   69 (307)
T ss_dssp             CEEEEECC-SHHHHHHHHHHH-TTS-------EEEEECSC----HHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHh-cCC-------ceEEEECC----HHHHHHHHhCCceEecCCCeecccccccccccCCCC
Confidence            68999999 999999999999 776       89999998    433332211000000000000011011124678999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEech
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLR  160 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~  160 (329)
                      +||++.    |+            ..+.++++.++.+ .++. |+.+.|-++..- .+.+   .+|.+++ .|.+.
T Consensus        70 ~vilav----K~------------~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e-~l~~---~~~~~~vl~g~~~  123 (307)
T 3ego_A           70 LLVVTV----KQ------------HQLQSVFSSLERI-GKTN-ILFLQNGMGHIH-DLKD---WHVGHSIYVGIVE  123 (307)
T ss_dssp             EEEECC----CG------------GGHHHHHHHTTSS-CCCE-EEECCSSSHHHH-HHHT---CCCSCEEEEEEEC
T ss_pred             EEEEEe----CH------------HHHHHHHHHhhcC-CCCe-EEEecCCccHHH-HHHH---hCCCCcEEEEEEe
Confidence            999973    21            1244556677766 4677 888889877542 2333   3456675 44444

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=97.94  E-value=2.5e-05  Score=69.19  Aligned_cols=99  Identities=11%  Similarity=0.131  Sum_probs=64.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      |||+|||+ |.+|+.++..|...+ .       +|.++|++    .++++..    .+..     .+..+.+..+++ ++
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~-------~v~~~~r~----~~~~~~~----~~~~-----g~~~~~~~~~~~-~~   58 (263)
T 1yqg_A            1 MNVYFLGG-GNMAAAVAGGLVKQGGY-------RIYIANRG----AEKRERL----EKEL-----GVETSATLPELH-SD   58 (263)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSC-------EEEEECSS----HHHHHHH----HHHT-----CCEEESSCCCCC-TT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCC-------eEEEECCC----HHHHHHH----HHhc-----CCEEeCCHHHHh-cC
Confidence            48999998 999999999999887 5       89999998    4444422    2110     134455666778 99


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA  147 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~  147 (329)
                      |+||++.. +               ..++++.+.+..  + +.+|+.++|....  ..+.+..
T Consensus        59 D~vi~~v~-~---------------~~~~~v~~~l~~--~-~~ivv~~~~g~~~--~~l~~~~  100 (263)
T 1yqg_A           59 DVLILAVK-P---------------QDMEAACKNIRT--N-GALVLSVAAGLSV--GTLSRYL  100 (263)
T ss_dssp             SEEEECSC-H---------------HHHHHHHTTCCC--T-TCEEEECCTTCCH--HHHHHHT
T ss_pred             CEEEEEeC-c---------------hhHHHHHHHhcc--C-CCEEEEecCCCCH--HHHHHHc
Confidence            99999832 1               234444444433  2 6677777666553  3344443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.93  E-value=1.9e-05  Score=71.76  Aligned_cols=63  Identities=19%  Similarity=0.278  Sum_probs=45.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||++||- |.+|.++|..|++.|+       +|+.||++    .++.+.    +.+.      ..+...+..++++++|
T Consensus         6 ~kIgfIGL-G~MG~~mA~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~------G~~~~~s~~e~~~~~d   63 (297)
T 4gbj_A            6 EKIAFLGL-GNLGTPIAEILLEAGY-------ELVVWNRT----ASKAEP----LTKL------GATVVENAIDAITPGG   63 (297)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEC-----------CT----TTTT------TCEECSSGGGGCCTTC
T ss_pred             CcEEEEec-HHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHH----HHHc------CCeEeCCHHHHHhcCC
Confidence            48999998 9999999999999998       99999999    444432    2221      2344566788999999


Q ss_pred             EEEEe
Q psy9582          86 IAILI   90 (329)
Q Consensus        86 iVi~~   90 (329)
                      +||++
T Consensus        64 vvi~~   68 (297)
T 4gbj_A           64 IVFSV   68 (297)
T ss_dssp             EEEEC
T ss_pred             ceeee
Confidence            99987

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=97.93  E-value=1.3e-05  Score=74.94  Aligned_cols=173  Identities=9%  Similarity=0.042  Sum_probs=92.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .++|.|+||+|++|++++..|+..| .       +|+++|++.....+.+.    +-.... ....++.-..+..+++++
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~-------~V~~~~r~~~~~~~~l~----~~~~v~-~~~~Dl~d~~~l~~~~~~   99 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVN-------QVHVVDNLLSAEKINVP----DHPAVR-FSETSITDDALLASLQDE   99 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCS-------EEEEECCCTTCCGGGSC----CCTTEE-EECSCTTCHHHHHHCCSC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCc-------eEEEEECCCCCchhhcc----CCCceE-EEECCCCCHHHHHHHhhC
Confidence            4689999999999999999999988 6       89999987211001110    000000 000111111223457789


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH--HH-HHH--HHC---CCCCCC
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN--TY-ITM--KSA---PDLSYK  153 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~--~~-~~~--~~~---~~~~~~  153 (329)
                      +|+||++++.....  ..+....+..|+.....+++.+.+..... .+|.+|-..-.-  .. .+.  +..   +..++.
T Consensus       100 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~  178 (377)
T 2q1s_A          100 YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLK-KVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND  178 (377)
T ss_dssp             CSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCC-EEEEEEEC--------------CCCCCCCSSCCC
T ss_pred             CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEeCCHHHcCCCCCCCcCcccccccccccCCC
Confidence            99999998764311  12345667889999999999888751123 444444321000  00 000  101   000111


Q ss_pred             cEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         154 NFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       154 ~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      ...+.+-....++...+++..+++..-++...++|..
T Consensus       179 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~  215 (377)
T 2q1s_A          179 SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPG  215 (377)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCC
Confidence            1222333333445555556667776666655566754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.93  E-value=4e-06  Score=78.01  Aligned_cols=114  Identities=11%  Similarity=0.120  Sum_probs=73.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~~~~al~   82 (329)
                      ++||.|+||+|++|++++..|+.. +.       +|+.+|++    .+.+.... +..... ....++. -.....++++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~----~~~~~~~~-~~~~v~-~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDW-------EVFGMDMQ----TDRLGDLV-KHERMH-FFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSC-------EEEEEESC----CTTTGGGG-GSTTEE-EEECCTTTCHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-------EEEEEeCC----hhhhhhhc-cCCCeE-EEeCccCCCHHHHHHHhc
Confidence            368999999999999999999987 76       89999998    33332111 000000 0001111 1112345677


Q ss_pred             CccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++|+||++|+......  .+..+.+..|+...+.+++.+.+..   ..+|.+|-
T Consensus        91 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS  141 (372)
T 3slg_A           91 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPST  141 (372)
T ss_dssp             HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECC
T ss_pred             cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCc
Confidence            9999999987643211  2344566788888899999998873   45666654

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=97.93  E-value=1.3e-05  Score=73.14  Aligned_cols=113  Identities=15%  Similarity=0.147  Sum_probs=69.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      +||+|||+ |.+|+.++..|.+.|.       +|.++++++   .+.+...-..+....... ...+.++++. ++++++
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~-------~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~   70 (312)
T 3hn2_A            3 LRIAIVGA-GALGLYYGALLQRSGE-------DVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPM   70 (312)
T ss_dssp             -CEEEECC-STTHHHHHHHHHHTSC-------CEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC-------eEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCC
Confidence            57999999 9999999999999886       899999971   111110000000000000 0123344553 567899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA  147 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~  147 (329)
                      |+||++.    |+            ..++++++.++.+..++..|+.+.|-.+.... +.+..
T Consensus        71 D~vilav----k~------------~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~-l~~~~  116 (312)
T 3hn2_A           71 DLVLVGL----KT------------FANSRYEELIRPLVEEGTQILTLQNGLGNEEA-LATLF  116 (312)
T ss_dssp             SEEEECC----CG------------GGGGGHHHHHGGGCCTTCEEEECCSSSSHHHH-HHHHT
T ss_pred             CEEEEec----CC------------CCcHHHHHHHHhhcCCCCEEEEecCCCCcHHH-HHHHC
Confidence            9999973    11            12345567777776688899999998765433 34444

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.92  E-value=3.1e-05  Score=70.19  Aligned_cols=118  Identities=12%  Similarity=0.050  Sum_probs=68.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec-CCcccccchhhhHhhhhh---cccCCccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA-SNKKSQKAIKGVIMEIED---CIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~~~~~~~~~dl~~---~~~~~~~~i~~~~~~~~al   81 (329)
                      ++|.|+||+|++|++++..|+..|.       +|+.+++ +.+. ..+.... .++..   .......++.-..+..+++
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~   72 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGY-------SVNTTIRADPER-KRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAI   72 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEECCCC-----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHH
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCC-------EEEEEEeCCccc-hhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHH
Confidence            5899999999999999999999887       8998887 5110 0111110 11110   0000001121123345678


Q ss_pred             CCccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KDANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +++|+||++|+.......+ ..+.+..|+.....+++.+.+.... ..||++|
T Consensus        73 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~-~~iV~~S  124 (322)
T 2p4h_X           73 EGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTV-KRFIYTS  124 (322)
T ss_dssp             TTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSC-CEEEEEE
T ss_pred             cCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEec
Confidence            8999999998632111111 2346788999999999988875212 3455544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.92  E-value=1.2e-05  Score=70.51  Aligned_cols=117  Identities=7%  Similarity=0.009  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh----hHhhhhhcccCCccceE-eecCc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG----VIMEIEDCIFPLLVDVS-VHENP   77 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~----~~~dl~~~~~~~~~~i~-~~~~~   77 (329)
                      .+.+++.|+||+|++|.+++..|++.|.       +|++.|++.    +.+.+    ...|+.+..     .+. .....
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~~~D~~~~~-----~v~~~~~~~   68 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-------WVASIDVVE----NEEASASVIVKMTDSFTE-----QADQVTAEV   68 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESSC----CTTSSEEEECCCCSCHHH-----HHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-------EEEEEeCCh----hhccCCcEEEEcCCCCHH-----HHHHHHHHH
Confidence            4457899999999999999999999987       899999983    22221    112222110     000 00011


Q ss_pred             cccc--CCccEEEEeCCCCCC-C---CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAF--KDANIAILIGSFPRK-S---NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al--~~aDiVi~~~g~~~~-~---g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.+  ...|++|+.+|.... +   ..   .....+..|+.....+.+.+.+...+.+.||++|--
T Consensus        69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~  135 (241)
T 1dhr_A           69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  135 (241)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCH
Confidence            1223  478999999986431 1   11   133456678777777776666553234677777643

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.90  E-value=3e-05  Score=75.05  Aligned_cols=99  Identities=12%  Similarity=0.110  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF---   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al---   81 (329)
                      .+||+|||. |.||.++|..|+..|+       +|.++|++    .++++..    .... ....++..+.+..+++   
T Consensus         4 ~~kIgiIGl-G~MG~~lA~~L~~~G~-------~V~v~dr~----~~~~~~l----~~~g-~~g~~i~~~~s~~e~v~~l   66 (484)
T 4gwg_A            4 QADIALIGL-AVMGQNLILNMNDHGF-------VVCAFNRT----VSKVDDF----LANE-AKGTKVVGAQSLKEMVSKL   66 (484)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----THHHHHH----HHTT-TTTSSCEECSSHHHHHHTB
T ss_pred             CCEEEEECh-hHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHH----Hhcc-cCCCceeccCCHHHHHhhc
Confidence            368999998 9999999999999987       89999999    4444422    2110 0011344445555554   


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +++|+||++...+               +.++++++.+.....++.+||..+|-
T Consensus        67 ~~aDvVil~Vp~~---------------~~v~~vl~~l~~~L~~g~iIId~st~  105 (484)
T 4gwg_A           67 KKPRRIILLVKAG---------------QAVDDFIEKLVPLLDTGDIIIDGGNS  105 (484)
T ss_dssp             CSSCEEEECSCSS---------------HHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred             cCCCEEEEecCCh---------------HHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence            4699999973221               24555566777776678888888863

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.90  E-value=1.9e-05  Score=72.85  Aligned_cols=176  Identities=13%  Similarity=0.057  Sum_probs=95.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh---cccCC-ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED---CIFPL-LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~---~~~~~-~~~i~~~~~~~~a   80 (329)
                      +++|.|+||+|++|++++..|+..|.       +|+++|++.....+.+......+..   ..... ..++.-..+..++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   99 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQ-------KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA   99 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH
Confidence            46899999999999999999999886       8999998721111112211111100   00000 0011111123456


Q ss_pred             cCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH---HHHHHCCCCCCCcE
Q psy9582          81 FKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY---ITMKSAPDLSYKNF  155 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~---~~~~~~~~~~~~~i  155 (329)
                      ++++|+||++++.....  ..+....+..|+.....+++.+.+.. .. .+|++|-....-..   .+.+..+ .++...
T Consensus       100 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~~v~~SS~~~~~~~~~~~~~E~~~-~~~~~~  176 (352)
T 1sb8_A          100 CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQ-SFTYAASSSTYGDHPGLPKVEDTI-GKPLSP  176 (352)
T ss_dssp             HTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CS-EEEEEEEGGGGTTCCCSSBCTTCC-CCCCSH
T ss_pred             hcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEeccHHhcCCCCCCCCCCCCC-CCCCCh
Confidence            78999999998864311  12345567789999999999988753 33 45555432210000   0000110 111112


Q ss_pred             EEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         156 TAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       156 ~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      .+.+-....++...+++..+++..-++...++|..
T Consensus       177 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~  211 (352)
T 1sb8_A          177 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRR  211 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTT
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcC
Confidence            22333333445555566668777666665567754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.90  E-value=1.3e-05  Score=70.92  Aligned_cols=120  Identities=10%  Similarity=0.122  Sum_probs=75.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------Cc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------NP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~~   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..       ..
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGA-------EVLLTGRN----ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence            46899999999999999999999997       89999998    44444333232111000000110000       11


Q ss_pred             ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.+...|++|+.+|......   .+   ....+..|+.....+.+.+.++..+.+.||+++-.
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  140 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV  140 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence            123447899999998754211   12   34557788888888888877764345677777653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.90  E-value=5.1e-05  Score=66.30  Aligned_cols=106  Identities=13%  Similarity=0.074  Sum_probs=69.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhcccCCccceEeecCccccc---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCIFPLLVDVSVHENPITAF---   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~~~~~~~i~~~~~~~~al---   81 (329)
                      ++|.|+||+|++|++++..|++.|.       +|+++|++.    +.+. ....|+.+..           +..+++   
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~D~~~~~-----------~~~~~~~~~   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-------TVIGIDRGQ----ADIEADLSTPGGRET-----------AVAAVLDRC   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSS----SSEECCTTSHHHHHH-----------HHHHHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCCh----hHccccccCCcccHH-----------HHHHHHHHc
Confidence            3699999999999999999999887       899999983    2221 1234444321           111222   


Q ss_pred             -CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          82 -KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        82 -~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                       .+.|+||+++|.... .......+..|+.....+++.+.+..  .....+|++|-
T Consensus        60 ~~~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS  114 (255)
T 2dkn_A           60 GGVLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS  114 (255)
T ss_dssp             TTCCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             CCCccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEec
Confidence             489999999986542 23456677788877777776555542  12356666653

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.90  E-value=2e-05  Score=68.69  Aligned_cols=112  Identities=17%  Similarity=0.187  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      .++|.|+||+|++|++++..|++.  +.       +|++++++    .+++..    +.........++.-..+..++++
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~   68 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKF-------VAKGLVRS----AQGKEK----IGGEADVFIGDITDADSINPAFQ   68 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTC-------EEEEEESC----HHHHHH----TTCCTTEEECCTTSHHHHHHHHT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCc-------EEEEEEcC----CCchhh----cCCCeeEEEecCCCHHHHHHHHc
Confidence            468999999999999999999998  55       89999998    333321    11000000011111123456788


Q ss_pred             CccEEEEeCCCCCC------------CCC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRK------------SNM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~------------~g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++|+||++++....            +..   .....+..|+.....+++.+.+.. .. .+|++|
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~iv~~S  132 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VK-HIVVVG  132 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CS-EEEEEE
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CC-EEEEEc
Confidence            99999999875321            110   112346788888899999888863 33 444444

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.89  E-value=2e-05  Score=71.40  Aligned_cols=103  Identities=13%  Similarity=0.092  Sum_probs=56.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD--   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~--   83 (329)
                      ++|.|+||+|++|++++..|+..|.       +|+++|++.    ..-.....|+.+           ..+..+++++  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~Dl~d-----------~~~~~~~~~~~~   60 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNW-------HAVGCGFRR----ARPKFEQVNLLD-----------SNAVHHIIHDFQ   60 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEC---------------------------------CHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCC-------eEEEEccCC----CCCCeEEecCCC-----------HHHHHHHHHhhC
Confidence            5899999999999999999999886       899999872    210011123322           1234455654  


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .|+||++++.....  ..+....+..|+.....+++.+.+.. .  .+|++|
T Consensus        61 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~S  109 (315)
T 2ydy_A           61 PHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A--FLIYIS  109 (315)
T ss_dssp             CSEEEECC-------------------CHHHHHHHHHHHHHT-C--EEEEEE
T ss_pred             CCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEc
Confidence            89999998864321  12344566789999999999888863 3  555555

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.89  E-value=1.7e-05  Score=72.68  Aligned_cols=114  Identities=11%  Similarity=0.027  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD-   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~-   83 (329)
                      .++|.|+||+|++|++++..|+..|.       +|+++|++.....+.+.    ++.... ....++.-..+..+++++ 
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~l~----~~~~~~-~~~~Dl~d~~~~~~~~~~~   88 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGD-------KVVGIDNFATGRREHLK----DHPNLT-FVEGSIADHALVNQLIGDL   88 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCCGGGSC----CCTTEE-EEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEECCCccchhhHh----hcCCce-EEEEeCCCHHHHHHHHhcc
Confidence            36899999999999999999999886       89999987211011111    010000 000011001123345666 


Q ss_pred             -ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 -ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 -aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                       +|+||++++..........+ +..|+.....+++.+.+.. .. .||++|
T Consensus        89 ~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~-~~-~iV~~S  136 (333)
T 2q1w_A           89 QPDAVVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNN-VG-RFVYFQ  136 (333)
T ss_dssp             CCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTT-CS-EEEEEE
T ss_pred             CCcEEEECceecCCCccCChH-HHHHHHHHHHHHHHHHHhC-CC-EEEEEC
Confidence             99999998865422111223 7789999999999888753 33 455554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.88  E-value=6.3e-06  Score=73.84  Aligned_cols=100  Identities=14%  Similarity=0.170  Sum_probs=64.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh----hhHhhhhhcccCCccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK----GVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~----~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      +||.|+|+ |++|++++..|++.|.       +|+.++++    ...+.    -...|+.+           ..+..+++
T Consensus         4 ~~ilVtGa-G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~Dl~d-----------~~~~~~~~   60 (286)
T 3gpi_A            4 SKILIAGC-GDLGLELARRLTAQGH-------EVTGLRRS----AQPMPAGVQTLIADVTR-----------PDTLASIV   60 (286)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-------CEEEEECT----TSCCCTTCCEEECCTTC-----------GGGCTTGG
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----ccccccCCceEEccCCC-----------hHHHHHhh
Confidence            68999996 9999999999999887       89999998    22221    11112221           12234566


Q ss_pred             CC-ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KD-ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~-aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++ +|+||++++...   .+.......|+...+.+++.+.+.. .. .+|.+|
T Consensus        61 ~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~v~~S  108 (286)
T 3gpi_A           61 HLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAP-LQ-HVFFVS  108 (286)
T ss_dssp             GGCCSEEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSC-CC-EEEEEE
T ss_pred             cCCCCEEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCC-CC-EEEEEc
Confidence            66 999999876432   1223345668888999999888742 33 455544

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=97.88  E-value=4.3e-05  Score=69.18  Aligned_cols=165  Identities=14%  Similarity=0.114  Sum_probs=91.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      +|.|+||+|++|++++..|+..|.       .+.+.+.+    .......    .........++.- .+..++++++|+
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~-------~v~~~~~~----~~~~~~~----~~~~~~~~~Dl~~-~~~~~~~~~~d~   66 (313)
T 3ehe_A            3 LIVVTGGAGFIGSHVVDKLSESNE-------IVVIDNLS----SGNEEFV----NEAARLVKADLAA-DDIKDYLKGAEE   66 (313)
T ss_dssp             CEEEETTTSHHHHHHHHHHTTTSC-------EEEECCCS----SCCGGGS----CTTEEEECCCTTT-SCCHHHHTTCSE
T ss_pred             EEEEECCCchHHHHHHHHHHhCCC-------EEEEEcCC----CCChhhc----CCCcEEEECcCCh-HHHHHHhcCCCE
Confidence            699999999999999999998873       44444443    2211110    0000000011211 345667889999


Q ss_pred             EEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH---HHHHHHCCCCCCCcEEEechh
Q psy9582          87 AILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT---YITMKSAPDLSYKNFTAMLRL  161 (329)
Q Consensus        87 Vi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~---~~~~~~~~~~~~~~i~~~t~l  161 (329)
                      ||++++.+..  ........+..|+.....+++.+.+.. .. .+|++|--.-.-.   ..+.+.. ..++....+.+-.
T Consensus        67 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~iv~~SS~~vyg~~~~~~~~E~~-~~~~~~~Y~~sK~  143 (313)
T 3ehe_A           67 VWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VS-RIVFTSTSTVYGEAKVIPTPEDY-PTHPISLYGASKL  143 (313)
T ss_dssp             EEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CC-EEEEECCGGGGCSCSSSSBCTTS-CCCCCSHHHHHHH
T ss_pred             EEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEeCchHHhCcCCCCCCCCCC-CCCCCCHHHHHHH
Confidence            9999886432  224566778899999999999998863 33 5555553210000   0000001 1111112233333


Q ss_pred             HHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         162 DHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       162 ds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      ...++...+++..+++..-++...++|..
T Consensus       144 ~~e~~~~~~~~~~g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          144 ACEALIESYCHTFDMQAWIYRFANVIGRR  172 (313)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSCEESTT
T ss_pred             HHHHHHHHHHHhcCCCEEEEeeccccCcC
Confidence            34455566666777665555544456653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.88  E-value=9.4e-06  Score=75.05  Aligned_cols=118  Identities=12%  Similarity=0.101  Sum_probs=72.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~   82 (329)
                      .++|.|+||+|++|++++..|+..|.       +|++++++.    .........+.... ... ..++.-..+..++++
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   77 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-------TVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQNKLLESIR   77 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-------eEEEEeCCC----cccchhhHhhccCCceEEEEccccCHHHHHHHHH
Confidence            47999999999999999999999886       899999982    22221111111000 000 001110112234455


Q ss_pred             C--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 D--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +  .|+||++++.+...  .......+..|+.....+++.+.+.. .-..||++|-
T Consensus        78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS  132 (357)
T 1rkx_A           78 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITS  132 (357)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECC
T ss_pred             hcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEecC
Confidence            4  79999998864211  12344667889999999999888863 2345666654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.87  E-value=3.4e-05  Score=68.51  Aligned_cols=117  Identities=12%  Similarity=0.028  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecC------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHEN------   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~------   76 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.....+  .++. +..|      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~   72 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-------KVALVDWN----LEAGVQCKAALHEQFEP--QKTLFIQCDVADQQQ   72 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHTTTSCG--GGEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhhcCC--CceEEEecCCCCHHH
Confidence            346899999999999999999999987       89999998    44333222233221000  0111 1111      


Q ss_pred             cccc-------cCCccEEEEeCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHhhhcC-CCeEEEEEcCc
Q psy9582          77 PITA-------FKDANIAILIGSFPRKSNMERSELLAINSS----IFIEQGKALNSVAS-RDVKVLVVGNP  135 (329)
Q Consensus        77 ~~~a-------l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~----~~~~i~~~i~~~~~-p~a~viv~tNP  135 (329)
                      ..++       +...|++|+.+|...  .......+..|+.    ..+.+.+.+.+... +.+.||++|-.
T Consensus        73 v~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           73 LRDTFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence            1112       235699999998653  2345566677766    55666666665421 24677777654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.86  E-value=1.7e-05  Score=71.54  Aligned_cols=111  Identities=8%  Similarity=0.018  Sum_probs=67.8

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~   79 (329)
                      |+++++|.|+||+|++|++++..|+..+ .       +|++++++    .++...  ..+....... ..++.-..++.+
T Consensus         2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~-------~V~~~~R~----~~~~~~--~~l~~~~~~~~~~D~~d~~~l~~   68 (299)
T 2wm3_A            2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTF-------KVRVVTRN----PRKKAA--KELRLQGAEVVQGDQDDQVIMEL   68 (299)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHHCSS-------EEEEEESC----TTSHHH--HHHHHTTCEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhcCCc-------eEEEEEcC----CCCHHH--HHHHHCCCEEEEecCCCHHHHHH
Confidence            5556799999999999999999999876 5       89999998    332211  1121111000 011111123456


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +++++|.||++++.....      ....|+...+.+++.+++.. .. .||..|
T Consensus        69 ~~~~~d~vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~g-v~-~iv~~S  114 (299)
T 2wm3_A           69 ALNGAYATFIVTNYWESC------SQEQEVKQGKLLADLARRLG-LH-YVVYSG  114 (299)
T ss_dssp             HHTTCSEEEECCCHHHHT------CHHHHHHHHHHHHHHHHHHT-CS-EEEECC
T ss_pred             HHhcCCEEEEeCCCCccc------cchHHHHHHHHHHHHHHHcC-CC-EEEEEc
Confidence            789999999987642111      13456777888888888763 33 444444

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.86  E-value=4.2e-05  Score=68.40  Aligned_cols=103  Identities=16%  Similarity=0.136  Sum_probs=66.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
                      |||.|+||+|++|++++..|... +.       +|++++++    .+++..    +....... ..++.-..++.+++++
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~-------~V~~~~R~----~~~~~~----~~~~~v~~~~~D~~d~~~l~~~~~~   65 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID-------HFHIGVRN----VEKVPD----DWRGKVSVRQLDYFNQESMVEAFKG   65 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT-------TEEEEESS----GGGSCG----GGBTTBEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC-------cEEEEECC----HHHHHH----hhhCCCEEEEcCCCCHHHHHHHHhC
Confidence            47999999999999999998886 65       79999998    333221    11110000 0111111234568999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|+||++++....        ...|+...+.+++.+++.. .. .||.+|
T Consensus        66 ~d~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~g-v~-~iv~~S  105 (289)
T 3e48_A           66 MDTVVFIPSIIHP--------SFKRIPEVENLVYAAKQSG-VA-HIIFIG  105 (289)
T ss_dssp             CSEEEECCCCCCS--------HHHHHHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             CCEEEEeCCCCcc--------chhhHHHHHHHHHHHHHcC-CC-EEEEEc
Confidence            9999999875431        1347778888888888863 44 344443

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=97.86  E-value=5.4e-05  Score=73.44  Aligned_cols=99  Identities=13%  Similarity=0.133  Sum_probs=66.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc---C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF---K   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al---~   82 (329)
                      +||+|||+ |.||++++..|+..|.       +|.++|++    .++++..... ...  .  ..+..+.+..+++   +
T Consensus         3 m~IgvIG~-G~mG~~lA~~La~~G~-------~V~v~dr~----~~~~~~l~~~-~~~--g--~gi~~~~~~~e~v~~l~   65 (482)
T 2pgd_A            3 ADIALIGL-AVMGQNLILNMNDHGF-------VVCAFNRT----VSKVDDFLAN-EAK--G--TKVLGAHSLEEMVSKLK   65 (482)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----THHHHHHHHT-TTT--T--SSCEECSSHHHHHHHBC
T ss_pred             CeEEEECh-HHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHhc-ccc--C--CCeEEeCCHHHHHhhcc
Confidence            58999998 9999999999999887       89999998    4444432210 000  0  1345556665554   5


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ++|+||++...+               ..++++++.+..+..++.+||..+|-.
T Consensus        66 ~aDvVilaVp~~---------------~~v~~vl~~l~~~l~~g~iII~~s~~~  104 (482)
T 2pgd_A           66 KPRRIILLVKAG---------------QAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (482)
T ss_dssp             SSCEEEECSCTT---------------HHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             CCCEEEEeCCCh---------------HHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence            999999973221               134445556666655677888887754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.86  E-value=3.1e-05  Score=69.02  Aligned_cols=118  Identities=17%  Similarity=0.241  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC-------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN-------   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~-------   76 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+       
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-------IVGLHGTR----EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEV   94 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHH
Confidence            347899999999999999999999987       89999998    444443332221100000001100001       


Q ss_pred             cccccCCccEEEEeCCCCCCC---CC---CHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 PITAFKDANIAILIGSFPRKS---NM---ERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~---g~---~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..+.+...|++|+.||.....   ..   +....+..|+..    .+.+.+.+.+.  ..+.||+++-
T Consensus        95 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~Iv~isS  160 (266)
T 3grp_A           95 AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR--RYGRIINITS  160 (266)
T ss_dssp             HHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCcEEEEECC
Confidence            112234789999999875321   11   233455667666    55666666654  3567777764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.86  E-value=5.8e-05  Score=66.88  Aligned_cols=118  Identities=10%  Similarity=0.068  Sum_probs=69.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF---   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al---   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+..+++   
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   75 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGA-------KVVFGDIL----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTA   75 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       89999998    44443332223211000000110001112223   


Q ss_pred             ----CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          82 ----KDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 ----~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                          .+.|++|+.+|.....   ..+   ....+..|+...    +.+.+.+++.  ..+.||++|-.
T Consensus        76 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  141 (260)
T 1nff_A           76 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA--GRGSIINISSI  141 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEEeeh
Confidence                3789999998865321   122   334556676655    5555666654  34677777643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.85  E-value=2.4e-05  Score=69.08  Aligned_cols=121  Identities=13%  Similarity=0.045  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI-----   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~-----   78 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+..     
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-------TVLGLDLK----PPAGEEPAAELGAAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESS----CC------------CEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence            357899999999999999999999987       89999998    33333222222110000000110001111     


Q ss_pred             --cccCCccEEEEeCCCCCCC-------CCC---HHHHHHHHHHHHHHHHHHHhhhcC--------CCeEEEEEcCc
Q psy9582          79 --TAFKDANIAILIGSFPRKS-------NME---RSELLAINSSIFIEQGKALNSVAS--------RDVKVLVVGNP  135 (329)
Q Consensus        79 --~al~~aDiVi~~~g~~~~~-------g~~---~~~~~~~n~~~~~~i~~~i~~~~~--------p~a~viv~tNP  135 (329)
                        +.+...|++|+.+|.....       ..+   ....+..|+.....+.+.+.++..        ..+.||+++-.
T Consensus        75 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~  151 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASI  151 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEech
Confidence              2233789999998865321       112   334556676655555544443321        34667777643

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.84  E-value=2.3e-05  Score=71.14  Aligned_cols=99  Identities=17%  Similarity=0.167  Sum_probs=70.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      +||.|+||+|++|++++..|+..|.       +|++++++    .      ..|+.+.           .+..++++  +
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~-------~v~~~~r~----~------~~D~~d~-----------~~~~~~~~~~~   55 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGD-------VELVLRTR----D------ELNLLDS-----------RAVHDFFASER   55 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-------EEEECCCT----T------TCCTTCH-----------HHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEecC----c------cCCccCH-----------HHHHHHHHhcC
Confidence            6899999999999999999998886       78888765    1      1233321           12334555  8


Q ss_pred             ccEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKS---NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~---g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +|+||++++.....   ..+..+.+..|+...+.+++.+.+.. .. .+|.+|-
T Consensus        56 ~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS  107 (321)
T 1e6u_A           56 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VN-KLLFLGS  107 (321)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CC-EEEEECC
T ss_pred             CCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEcc
Confidence            99999998764311   12345667889999999999988853 33 5666654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.84  E-value=0.00016  Score=64.16  Aligned_cols=118  Identities=15%  Similarity=0.128  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCcc-
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPI-   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~-   78 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........    .+++-..+.. 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~   77 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-------NVAVAGRS----TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDA   77 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHH
Confidence            357899999999999999999999987       89999998    5555555555543210000    0110001111 


Q ss_pred             ------cccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ------TAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ------~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                            +.+...|++|+.+|.... +  ..+   ....+..|+...    +.+.+.+.+.  ..+.||+++-
T Consensus        78 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS  147 (262)
T 3pk0_A           78 LAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS--GSGRVVLTSS  147 (262)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--SSCEEEEECC
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEec
Confidence                  123378999999886432 1  123   233456666544    4444555543  3456666653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.84  E-value=4.5e-05  Score=66.86  Aligned_cols=118  Identities=19%  Similarity=0.229  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCccceEeecCcccc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLLVDVSVHENPITA---   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~~~i~~~~~~~~a---   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++    .++++....++.... .....++.-..+..++   
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGA-------RLILIDRE----AAALDRAAQELGAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHH
Confidence            46899999999999999999999987       89999998    444433222221100 0000011000111111   


Q ss_pred             ---cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 ---FKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ---l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                         +.+.|+||+.+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|-.
T Consensus        80 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~iv~isS~  145 (254)
T 2wsb_A           80 AEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR--GAGAIVNLGSM  145 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEecc
Confidence               35789999999865321   112   23455667665    44455555554  34677777654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.84  E-value=2.5e-05  Score=71.72  Aligned_cols=119  Identities=10%  Similarity=0.153  Sum_probs=70.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc--cccchhhhHhhhhhc-ccCC---ccceEeecCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK--SQKAIKGVIMEIEDC-IFPL---LVDVSVHENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--~~~~~~~~~~dl~~~-~~~~---~~~i~~~~~~~~   79 (329)
                      ++|.|+||+|++|++++..|+..|.       +|+++|++...  +.........++... ....   ..++.-..+..+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   75 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGY-------LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-------CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH
Confidence            5899999999999999999999886       89999986211  000011111122110 0000   001111112234


Q ss_pred             ccC--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          80 AFK--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        80 al~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +++  +.|+||++++.....  .......+..|+.....+++.+.+.. .. .+|++|
T Consensus        76 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~iv~~S  131 (348)
T 1ek6_A           76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VK-NLVFSS  131 (348)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             HHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEEC
Confidence            455  799999998864211  12345667889999999999888753 33 445554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.84  E-value=2.1e-05  Score=71.73  Aligned_cols=113  Identities=12%  Similarity=0.081  Sum_probs=70.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      +||.|+||+|++|++++..|+..|.       +|+++|++.    .....   .+.........++.-.....++++  +
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   67 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGL-------SVVVVDNLQ----TGHED---AITEGAKFYNGDLRDKAFLRDVFTQEN   67 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS----SCCGG---GSCTTSEEEECCTTCHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-------EEEEEeCCC----cCchh---hcCCCcEEEECCCCCHHHHHHHHhhcC
Confidence            4799999999999999999999886       899999872    11110   111000000001100112334566  8


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +|+||++++.....  ..+....+..|+.....+++.+.+.. .. .+|.+|-
T Consensus        68 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~~v~~Ss  118 (330)
T 2c20_A           68 IEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VD-KFIFSST  118 (330)
T ss_dssp             EEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CC-EEEEECC
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CC-EEEEeCC
Confidence            99999998864311  12345567789999999999988753 33 5555554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.83  E-value=1e-05  Score=62.10  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~al   81 (329)
                      ..+||+|+|+ |.+|+.++..|...| .       +|+++|++    .++++...    ..... ...++.-..+..+.+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~-------~v~~~~r~----~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNY-------SVTVADHD----LAALAVLN----RMGVATKQVDAKDEAGLAKAL   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSE-------EEEEEESC----HHHHHHHH----TTTCEEEECCTTCHHHHHHHT
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCc-------eEEEEeCC----HHHHHHHH----hCCCcEEEecCCCHHHHHHHH
Confidence            3468999999 999999999999988 4       89999998    44443221    11000 001111112344578


Q ss_pred             CCccEEEEeCC
Q psy9582          82 KDANIAILIGS   92 (329)
Q Consensus        82 ~~aDiVi~~~g   92 (329)
                      +++|+||.+++
T Consensus        68 ~~~d~vi~~~~   78 (118)
T 3ic5_A           68 GGFDAVISAAP   78 (118)
T ss_dssp             TTCSEEEECSC
T ss_pred             cCCCEEEECCC
Confidence            89999999864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.83  E-value=1.7e-05  Score=72.56  Aligned_cols=111  Identities=12%  Similarity=0.147  Sum_probs=70.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec---Cccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE---NPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~---~~~~al   81 (329)
                      |||.|+||+|++|++++..|+.. |.       +|+++|++    ...+....   .+...... ...++.   ...+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~----~~~~~~~~---~~~~~~~~-~~D~~~~~~~~~~~~   65 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY-------EVYGLDIG----SDAISRFL---NHPHFHFV-EGDISIHSEWIEYHV   65 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-------EEEEEESC----CGGGGGGT---TCTTEEEE-ECCTTTCSHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC-------EEEEEeCC----cchHHHhh---cCCCeEEE-eccccCcHHHHHhhc
Confidence            48999999999999999999987 66       89999998    33222110   00000000 000111   123466


Q ss_pred             CCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +++|+||++++.....  ..+....+..|+.....+++.+.+.  . ..+|.+|-
T Consensus        66 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~v~~SS  117 (345)
T 2bll_A           66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY--R-KRIIFPST  117 (345)
T ss_dssp             HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEECC
T ss_pred             cCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh--C-CeEEEEec
Confidence            7899999998764311  1234456678888888998888875  2 46666654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.83  E-value=2.7e-05  Score=68.33  Aligned_cols=118  Identities=15%  Similarity=0.117  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++........   .++.-..+..+++
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   79 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHH
Confidence            47899999999999999999999887       89999998    4444433333332110000   0110001112222


Q ss_pred             -------CCccEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEcCc
Q psy9582          82 -------KDANIAILIGSFPRKS--NME---RSELLAINSSIFIEQGKAL----NSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 -------~~aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~tNP  135 (329)
                             .+.|+||+++|.....  ..+   ....+..|+.....+.+.+    ++.  ..+.|+++|-.
T Consensus        80 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~iv~~sS~  147 (255)
T 1fmc_A           80 DFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN--GGGVILTITSM  147 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcch
Confidence                   3789999998864321  222   2345566776655554444    443  34677777643

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.83  E-value=2.3e-05  Score=68.00  Aligned_cols=117  Identities=19%  Similarity=0.166  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI-----   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~-----   78 (329)
                      +.++|.|+||+|++|++++..|++.|.       +|+++|++    .+.++....++.... ....++.-..+..     
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~   71 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGY-------RVGLMARD----EKRLQALAAELEGAL-PLPGDVREEGDWARAVAA   71 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhhhce-EEEecCCCHHHHHHHHHH
Confidence            346799999999999999999999987       89999998    444433222221100 0000110001111     


Q ss_pred             --cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 --TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 --~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tN  134 (329)
                        +.+.+.|+||+++|.....   ..+   ....+..|+....    .+.+.+.+.  ..+.||++|-
T Consensus        72 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~~~iv~isS  137 (234)
T 2ehd_A           72 MEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR--GGGTIVNVGS  137 (234)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT--TCEEEEEECC
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCcEEEEECC
Confidence              1234789999998864321   112   3345566666554    445555543  3467777764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.82  E-value=3.9e-05  Score=67.51  Aligned_cols=120  Identities=13%  Similarity=0.171  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~al   81 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.......   ..+++-..+..+++
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   81 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGA-------RVIIADLD----EAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAV   81 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    444443333333211000   00110001111222


Q ss_pred             -------CCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          82 -------KDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        82 -------~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                             ...|+||+.+|...  .+  ..+   ....+..|+.....+++.+.++.  ...+.|++++-.
T Consensus        82 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~  151 (260)
T 3awd_A           82 RSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSM  151 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecc
Confidence                   36899999988643  11  122   23445667666555554443321  135677777643

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.82  E-value=1.3e-05  Score=69.33  Aligned_cols=93  Identities=12%  Similarity=0.115  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|+.++..|...+.       +|.++|++    .++++.    +.+.      .+..+ +..++++++
T Consensus        28 ~~~I~iiG~-G~~G~~la~~l~~~g~-------~V~~~~r~----~~~~~~----~~~~------g~~~~-~~~~~~~~~   84 (215)
T 2vns_A           28 APKVGILGS-GDFARSLATRLVGSGF-------KVVVGSRN----PKRTAR----LFPS------AAQVT-FQEEAVSSP   84 (215)
T ss_dssp             -CCEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESS----HHHHHH----HSBT------TSEEE-EHHHHTTSC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH----HHHc------CCcee-cHHHHHhCC
Confidence            368999997 9999999999998886       79999998    443332    2211      12233 456788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      |+||++...    ...            +++.+ +.... ++++++.++|+...
T Consensus        85 DvVi~av~~----~~~------------~~v~~-l~~~~-~~~~vv~~s~g~~~  120 (215)
T 2vns_A           85 EVIFVAVFR----EHY------------SSLCS-LSDQL-AGKILVDVSNPTEQ  120 (215)
T ss_dssp             SEEEECSCG----GGS------------GGGGG-GHHHH-TTCEEEECCCCCHH
T ss_pred             CEEEECCCh----HHH------------HHHHH-HHHhc-CCCEEEEeCCCccc
Confidence            999998431    111            11111 33344 67789999998754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.82  E-value=1.6e-05  Score=73.97  Aligned_cols=121  Identities=11%  Similarity=0.011  Sum_probs=69.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc-ccchhhhHhhh---hhcccCC-ccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS-QKAIKGVIMEI---EDCIFPL-LVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~~~~~~~~~dl---~~~~~~~-~~~i~~~~~~~~a   80 (329)
                      ++|.|+||+|++|++++..|+..|.       +|+++|++.... .+++.....+.   ....... ..++.-..+..++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   97 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY-------EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI   97 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHH
Confidence            5799999999999999999999886       899999872110 01111110000   0000000 0011001122334


Q ss_pred             cCC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCC--CeEEEEEcC
Q psy9582          81 FKD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASR--DVKVLVVGN  134 (329)
Q Consensus        81 l~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p--~a~viv~tN  134 (329)
                      +++  .|+||++++.....  ..+....+..|+.....+++.+.+.. .  ...||++|-
T Consensus        98 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS  156 (375)
T 1t2a_A           98 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQAST  156 (375)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEE
T ss_pred             HHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecc
Confidence            554  59999998864311  12344567789999999999888764 3  145666553

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.81  E-value=3.1e-05  Score=69.01  Aligned_cols=120  Identities=19%  Similarity=0.215  Sum_probs=72.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~   77 (329)
                      ||+ .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++........   .+++-..+.
T Consensus         1 Ml~-~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v   68 (264)
T 3tfo_A            1 MVM-DKVILITGASGGIGEGIARELGVAGA-------KILLGARR----QARIEAIATEIRDAGGTALAQVLDVTDRHSV   68 (264)
T ss_dssp             CCT-TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred             CCC-CCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence            443 46899999999999999999999987       89999998    5555554444443210000   011000111


Q ss_pred             -------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 -------ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 -------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                             .+.+...|++|..+|.....   ..+   ....+..|+...    +.+.+.+.+.  ..+.||+++-
T Consensus        69 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~IV~isS  140 (264)
T 3tfo_A           69 AAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ--RSGQIINIGS  140 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEEcC
Confidence                   12234789999999875321   122   334455666544    4455555553  3567777764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=97.81  E-value=2e-05  Score=72.30  Aligned_cols=104  Identities=13%  Similarity=0.120  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCC-------CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGD-------LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE   75 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~-------~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~   75 (329)
                      +.++|.|+||+|++|++++..|+..|       .       +|+++|++.    .....    .......+ ..++.-..
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~-------~V~~~~r~~----~~~~~----~~~~~~~~~~~Dl~d~~   77 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVE-------KFTLIDVFQ----PEAPA----GFSGAVDARAADLSAPG   77 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEE-------EEEEEESSC----CCCCT----TCCSEEEEEECCTTSTT
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCc-------eEEEEEccC----Ccccc----ccCCceeEEEcCCCCHH
Confidence            34689999999999999999999887       4       899999872    21110    00000000 00110001


Q ss_pred             Cccccc-CCccEEEEeCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          76 NPITAF-KDANIAILIGSFPRK-SNMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        76 ~~~~al-~~aDiVi~~~g~~~~-~g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      +..+++ .+.|+||++|+.... ...+....+..|+.....+++.+.+.
T Consensus        78 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~  126 (342)
T 2hrz_A           78 EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIA  126 (342)
T ss_dssp             HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            223445 489999999886431 01234456778988888988888775

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.81  E-value=0.00013  Score=63.57  Aligned_cols=124  Identities=17%  Similarity=0.189  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEe-cCCcccccchhhhHhhhhhcccCC---ccceEeecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLE-ASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN   76 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D-~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~   76 (329)
                      |..+.++|.|+||+|++|.+++..|++.|.       +|+++| ++    .+.++....++.......   ..+++-..+
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~-------~V~~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   69 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGA-------NIVLNGSPA----STSLDATAEEFKAAGINVVVAKGDVKNPED   69 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEECTT----CSHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCcC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            434567999999999999999999999987       899984 44    333333323332211000   001100011


Q ss_pred             cccc-------cCCccEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          77 PITA-------FKDANIAILIGSFPRK------SNMERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        77 ~~~a-------l~~aDiVi~~~g~~~~------~g~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                      ..++       +.+.|+||+.+|....      +..+....+..|+.....+.+.+.++.  ...+.||++|-.
T Consensus        70 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  143 (247)
T 2hq1_A           70 VENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSI  143 (247)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh
Confidence            1122       2378999999886431      112334556677766544444433321  134677777654

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=97.80  E-value=5.2e-05  Score=70.14  Aligned_cols=90  Identities=13%  Similarity=0.135  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|.+++..|...|.       +|+++|++    .+.....+.   ..  .    +..+ +..+++++|
T Consensus        16 ~~~I~IIG~-G~mG~alA~~L~~~G~-------~V~~~~~~----~~~~~~~a~---~~--G----~~~~-~~~e~~~~a   73 (338)
T 1np3_A           16 GKKVAIIGY-GSQGHAHACNLKDSGV-------DVTVGLRS----GSATVAKAE---AH--G----LKVA-DVKTAVAAA   73 (338)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTC-------CEEEECCT----TCHHHHHHH---HT--T----CEEE-CHHHHHHTC
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCcC-------EEEEEECC----hHHHHHHHH---HC--C----CEEc-cHHHHHhcC
Confidence            368999998 9999999999999886       79999998    332111111   11  1    2333 566788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhhhcCCCeEEEEE
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGK-ALNSVASRDVKVLVV  132 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~-~i~~~~~p~a~viv~  132 (329)
                      |+||++.  |.              ....++.+ .+..+.+|+++|+.+
T Consensus        74 DvVilav--p~--------------~~~~~v~~~~i~~~l~~~~ivi~~  106 (338)
T 1np3_A           74 DVVMILT--PD--------------EFQGRLYKEEIEPNLKKGATLAFA  106 (338)
T ss_dssp             SEEEECS--CH--------------HHHHHHHHHHTGGGCCTTCEEEES
T ss_pred             CEEEEeC--Cc--------------HHHHHHHHHHHHhhCCCCCEEEEc
Confidence            9999973  21              12355555 777666677776644

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.80  E-value=2.7e-05  Score=68.59  Aligned_cols=118  Identities=17%  Similarity=0.174  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP------   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~------   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++.....+.........+++-..+.      
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   76 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-------KVIGTATS----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKA   76 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHH
Confidence            346899999999999999999999997       89999998    4444433333322110000011000111      


Q ss_pred             -ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          78 -ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 -~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                       .+.+...|++|+.+|......   .+   ....+..|+.....+    .+.+.+.  ..+.||+++-
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--~~g~iv~isS  142 (248)
T 3op4_A           77 ITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK--RQGRIINVGS  142 (248)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEEcc
Confidence             122347899999998754211   12   334556666554444    4445443  3567777764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.80  E-value=5.2e-05  Score=68.80  Aligned_cols=77  Identities=16%  Similarity=0.227  Sum_probs=57.3

Q ss_pred             CEEEEEc-CCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITG-AAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiG-a~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +||+||| + |.+|.+++..|...|.       +|.++|++    .+.                       +..+++++|
T Consensus        22 ~~I~iIGg~-G~mG~~la~~l~~~G~-------~V~~~~~~----~~~-----------------------~~~~~~~~a   66 (298)
T 2pv7_A           22 HKIVIVGGY-GKLGGLFARYLRASGY-------PISILDRE----DWA-----------------------VAESILANA   66 (298)
T ss_dssp             CCEEEETTT-SHHHHHHHHHHHTTTC-------CEEEECTT----CGG-----------------------GHHHHHTTC
T ss_pred             CEEEEEcCC-CHHHHHHHHHHHhCCC-------eEEEEECC----ccc-----------------------CHHHHhcCC
Confidence            4799999 6 9999999999999887       79999987    220                       234678899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||++.  |.              ..+.++++.+..+.+++++|+.++
T Consensus        67 DvVilav--p~--------------~~~~~vl~~l~~~l~~~~iv~~~~   99 (298)
T 2pv7_A           67 DVVIVSV--PI--------------NLTLETIERLKPYLTENMLLADLT   99 (298)
T ss_dssp             SEEEECS--CG--------------GGHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CEEEEeC--CH--------------HHHHHHHHHHHhhcCCCcEEEECC
Confidence            9999983  21              125566667776666777766654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.80  E-value=2.3e-05  Score=69.22  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI-----   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~-----   78 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++    .++++....++.........+++-..+..     
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-------KVVIVDRD----KAGAERVAGEIGDAALAVAADISKEADVDAAVEA   76 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999987       89999998    55554433333211000000110001111     


Q ss_pred             --cccCCccEEEEeCCCCCCCC----CC---HHHHHHHHHHH----HHHHHHHHhhhcC--CCeEEEEEcC
Q psy9582          79 --TAFKDANIAILIGSFPRKSN----ME---RSELLAINSSI----FIEQGKALNSVAS--RDVKVLVVGN  134 (329)
Q Consensus        79 --~al~~aDiVi~~~g~~~~~g----~~---~~~~~~~n~~~----~~~i~~~i~~~~~--p~a~viv~tN  134 (329)
                        +.+...|++|+.+|....++    .+   ....+..|+..    .+.+.+.+.+...  ..+.|++++-
T Consensus        77 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS  147 (261)
T 3n74_A           77 ALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAS  147 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             HHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCc
Confidence              22336799999998754221    12   22344556554    4445555554321  2456777764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.79  E-value=2e-05  Score=70.11  Aligned_cols=121  Identities=16%  Similarity=0.180  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA---   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a---   80 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+..++   
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-------SLVAVDRE----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE   73 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHH
Confidence            347899999999999999999999987       89999998    4444433222210000000011000111112   


Q ss_pred             ----cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 ----FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ----l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                          +...|++|+.+|.....   ..+   ....+..|+.....+.+.+.++....+.||++|-.
T Consensus        74 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  138 (263)
T 2a4k_A           74 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  138 (263)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence                23569999998864321   122   33456778887777777776654224677777644

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.79  E-value=3e-05  Score=70.96  Aligned_cols=171  Identities=12%  Similarity=0.053  Sum_probs=91.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC---C---CCCCCCCceEEEEecCCcc-cccchhhhHhhhhhcc-cCC-ccceEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG---D---LLGKDQPIILQLLEASNKK-SQKAIKGVIMEIEDCI-FPL-LVDVSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~---~---~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~   76 (329)
                      |||.|+||+|++|++++..|++.   +   .       +|+++|++... ..+.+.    ++.... ... ..++.-..+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~-------~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~   69 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD-------EVIVLDSLTYAGNRANLA----PVDADPRLRFVHGDIRDAGL   69 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS-------EEEEEECCCTTCCGGGGG----GGTTCTTEEEEECCTTCHHH
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCce-------EEEEEECCCccCchhhhh----hcccCCCeEEEEcCCCCHHH
Confidence            47999999999999999999985   5   4       89999986210 011111    111100 000 001111112


Q ss_pred             cccccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh--H-HHHHHHHCCCCC
Q psy9582          77 PITAFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT--N-TYITMKSAPDLS  151 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~--~-~~~~~~~~~~~~  151 (329)
                      ..+++.++|+||++++.....  ..+....+..|+.....+++.+.+.. .. .||++|-..-.  . ...+.+.. ..+
T Consensus        70 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~-~~v~~SS~~vyg~~~~~~~~E~~-~~~  146 (337)
T 1r6d_A           70 LARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VG-RVVHVSTNQVYGSIDSGSWTESS-PLE  146 (337)
T ss_dssp             HHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CC-EEEEEEEGGGGCCCSSSCBCTTS-CCC
T ss_pred             HHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEecchHHhCCCCCCCCCCCC-CCC
Confidence            345678999999998864310  01234567889999999999998863 33 45554421100  0 00000001 111


Q ss_pred             CCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         152 YKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       152 ~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      +....+.+-....++...+++..+++..-++...++|..
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~  185 (337)
T 1r6d_A          147 PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPY  185 (337)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCC
Confidence            111222233333445455566667766666655566754

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.79  E-value=4.3e-05  Score=66.51  Aligned_cols=100  Identities=17%  Similarity=0.118  Sum_probs=61.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~al~~   83 (329)
                      ++|.|+||+|++|++++..|+..| .       +|++++++    .+++...    ...... ...++.-..+..+++++
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-------~V~~~~R~----~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~   88 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-------KQTLFARQ----PAKIHKP----YPTNSQIIMGDVLNHAALKQAMQG   88 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-------EEEEEESS----GGGSCSS----CCTTEEEEECCTTCHHHHHHHHTT
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-------eEEEEEcC----hhhhccc----ccCCcEEEEecCCCHHHHHHHhcC
Confidence            589999999999999999999988 5       89999998    3333211    000000 00111111234567889


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +|+||++++...      .+      ...+.+++.+++.. . ..||++|-
T Consensus        89 ~D~vv~~a~~~~------~~------~~~~~~~~~~~~~~-~-~~iV~iSS  125 (236)
T 3qvo_A           89 QDIVYANLTGED------LD------IQANSVIAAMKACD-V-KRLIFVLS  125 (236)
T ss_dssp             CSEEEEECCSTT------HH------HHHHHHHHHHHHTT-C-CEEEEECC
T ss_pred             CCEEEEcCCCCc------hh------HHHHHHHHHHHHcC-C-CEEEEEec
Confidence            999999876421      11      23456777777753 3 35555553

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.79  E-value=5.1e-05  Score=67.14  Aligned_cols=119  Identities=12%  Similarity=0.138  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--ccCC---ccceEeecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--IFPL---LVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--~~~~---~~~i~~~~~~~   78 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++...  ....   ..+++-..+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   74 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-------RLLLFSRN----REKLEAAASRIASLVSGAQVDIVAGDIREPGDID   74 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHH
Confidence            347899999999999999999999987       89999998    44444333333211  0000   00110001112


Q ss_pred             cccC------CccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 TAFK------DANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ~al~------~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ++++      +.|++|+.+|.....   ..+   ....+..|+...    +.+.+.+.+.  ..+.||++|-.
T Consensus        75 ~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  145 (260)
T 2z1n_A           75 RLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK--GWGRMVYIGSV  145 (260)
T ss_dssp             HHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECch
Confidence            2232      489999999864321   122   334556666655    5555555553  34667777643

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.78  E-value=2.6e-05  Score=68.08  Aligned_cols=118  Identities=18%  Similarity=0.165  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh-cccCC---ccceEeecCccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED-CIFPL---LVDVSVHENPIT   79 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~-~~~~~---~~~i~~~~~~~~   79 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++    .++++....++.. .....   ..++.-..+..+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-------TVIITGTS----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINK   74 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHH
Confidence            347899999999999999999999887       89999998    4444433333322 00000   001100011122


Q ss_pred             cc-------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          80 AF-------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 al-------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                      ++       .+.|+||+.+|.....   ..+   ....+..|+.....+    .+.+.+.  ..+.||++|-
T Consensus        75 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~iv~~sS  144 (248)
T 2pnf_A           75 AFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ--RWGRIVNISS  144 (248)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcc
Confidence            22       3789999998865421   122   334566777666444    4444443  3456777764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.78  E-value=8.2e-05  Score=66.65  Aligned_cols=119  Identities=13%  Similarity=0.154  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP------   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~------   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+.      
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-------YVVVADVN----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEK   94 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH
Confidence            346899999999999999999999987       89999998    4444433322211000000011000111      


Q ss_pred             -ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCc
Q psy9582          78 -ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 -~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP  135 (329)
                       .+.+...|++|+.||.....   ..+   ....+..|+.....+.    +.+.+.  ..+.||+++-.
T Consensus        95 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  161 (277)
T 4dqx_A           95 TTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN--GGGSIINTTSY  161 (277)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECCG
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEECch
Confidence             12234789999999864321   122   3345566766554444    444442  35677777643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.78  E-value=3.7e-05  Score=72.12  Aligned_cols=123  Identities=12%  Similarity=0.161  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc------------chhhhHhhhhhcccCCc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK------------AIKGVIMEIEDCIFPLL---   68 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~------------~~~~~~~dl~~~~~~~~---   68 (329)
                      +.++|.|+||+|++|++++..|++.|.       +|+++|+.......            .+.....++........   
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~   82 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNY-------EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELY   82 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEE
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCC-------eEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEE
Confidence            457999999999999999999999887       89999986100000            00000001100000000   


Q ss_pred             -cceEeecCcccccCC--ccEEEEeCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          69 -VDVSVHENPITAFKD--ANIAILIGSFPRKS--NMER---SELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        69 -~~i~~~~~~~~al~~--aDiVi~~~g~~~~~--g~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       .++.-..+..+++++  +|+||++|+.....  ..+.   ...+..|+.....+++.+.+.. ....||++|-
T Consensus        83 ~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS  155 (404)
T 1i24_A           83 VGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGT  155 (404)
T ss_dssp             ESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECC
T ss_pred             ECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCc
Confidence             011101122345666  99999998864311  1122   2356789999999999998874 3335666654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.78  E-value=3e-05  Score=70.36  Aligned_cols=119  Identities=14%  Similarity=0.098  Sum_probs=71.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a-   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.......   ..+++-..+..++ 
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   99 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGA-------RLVLSDVD----QPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLA   99 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            46899999999999999999999997       89999998    555554444444321000   0011100111122 


Q ss_pred             ------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q psy9582          81 ------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tNP  135 (329)
                            +...|++|..+|.....   ..+   ....+..|+.....+    .+.+.+.. ..+.|+++|--
T Consensus       100 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~  169 (301)
T 3tjr_A          100 DEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG-TGGHIAFTASF  169 (301)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-SCEEEEEECCG
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCcEEEEeCch
Confidence                  23789999999875321   112   334455665544444    44455542 35777777653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.77  E-value=1.8e-05  Score=70.28  Aligned_cols=121  Identities=13%  Similarity=0.095  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec-CCcccccchhhhHhhhhhcccCC---ccceEeecCccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA-SNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT   79 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~   79 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|++.++ +    .+.++....++.......   ..++.-..+..+
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-------~v~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   88 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-------SVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVA   88 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCc----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            347899999999999999999999987       8999998 4    333433333333211000   001100011122


Q ss_pred             cc-------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 AF-------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 al-------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ++       .+.|+||+.+|.....   ..+   ....+..|+.....+.+.+.+...+.+.||+++-.
T Consensus        89 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~  157 (274)
T 1ja9_A           89 LFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  157 (274)
T ss_dssp             HHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcCh
Confidence            23       3789999998865321   122   23456778888778877776654223567776643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.77  E-value=2.6e-05  Score=68.37  Aligned_cols=123  Identities=16%  Similarity=0.179  Sum_probs=72.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~   77 (329)
                      |.-+.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.+.....   ..+++-..+.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   69 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGA-------TVVGTATS----QASAEKFENSMKEKGFKARGLVLNISDIESI   69 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEEecCCCHHHH
Confidence            444567899999999999999999999987       89999998    444544444443221000   0011000011


Q ss_pred             c-------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcCch
Q psy9582          78 I-------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        78 ~-------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tNP~  136 (329)
                      .       +....-|++|+.+|.....   ..+   ....+..|+.....+    .+.+.+.  +.+.||+++-..
T Consensus        70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS~~  143 (247)
T 3lyl_A           70 QNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK--RWGRIISIGSVV  143 (247)
T ss_dssp             HHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCTH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCeEEEEEcchh
Confidence            1       1223579999999875421   112   334456666554444    4444443  356777776543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.77  E-value=3.8e-05  Score=68.95  Aligned_cols=99  Identities=15%  Similarity=0.168  Sum_probs=69.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD--   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~--   83 (329)
                      |||.|+||+|++|++++..|+ .|.       +|+.++++    ...   ...|+.+.           .+..+++++  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-------~V~~~~r~----~~~---~~~D~~d~-----------~~~~~~~~~~~   54 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG-------NLIALDVH----SKE---FCGDFSNP-----------KGVAETVRKLR   54 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS-------EEEEECTT----CSS---SCCCTTCH-----------HHHHHHHHHHC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC-------eEEEeccc----ccc---ccccCCCH-----------HHHHHHHHhcC
Confidence            489999999999999999999 775       89999987    321   12233321           123445555  


Q ss_pred             ccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|+||++++....  ...+....+..|+.....+++.+.+.. .  .+|.+|
T Consensus        55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~S  103 (299)
T 1n2s_A           55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A--WVVHYS  103 (299)
T ss_dssp             CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C--EEEEEE
T ss_pred             CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C--cEEEEe
Confidence            9999999886431  123456677889999999999998753 3  455554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.76  E-value=0.00011  Score=65.02  Aligned_cols=118  Identities=19%  Similarity=0.165  Sum_probs=71.5

Q ss_pred             CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c--cceEeecCcc-
Q psy9582           5 PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L--VDVSVHENPI-   78 (329)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~--~~i~~~~~~~-   78 (329)
                      .+++.|+||+  |++|.+++..|++.|.       +|++.|++    . .++....++....... .  .+++-..+.. 
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-------~V~~~~r~----~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~   76 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQN----D-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDT   76 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTC-------EEEEEESS----T-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEcCc----H-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence            4689999998  8999999999999987       89999998    3 1222222222110000 0  0110001111 


Q ss_pred             ------cccCCccEEEEeCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ------TAFKDANIAILIGSFPRK-----S--N-ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ------~al~~aDiVi~~~g~~~~-----~--g-~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                            +.+...|++|+.+|....     +  . .+   ....+..|+.....+.+.+.++..+.+.||++|-
T Consensus        77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  149 (265)
T 1qsg_A           77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY  149 (265)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence                  122367999999987542     1  1 22   3346678888888888888776423457777764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.76  E-value=2.7e-05  Score=67.80  Aligned_cols=115  Identities=9%  Similarity=0.013  Sum_probs=70.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh----hHhhhhhcccCCccceE-eecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG----VIMEIEDCIFPLLVDVS-VHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~----~~~dl~~~~~~~~~~i~-~~~~~~~a   80 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|+++    +.+.+    ...|+.+..     .+. ......+.
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~~~D~~~~~-----~~~~~~~~~~~~   67 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGY-------TVLNIDLSA----NDQADSNILVDGNKNWTE-----QEQSILEQTASS   67 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESSC----CTTSSEEEECCTTSCHHH-----HHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEecCc----cccccccEEEeCCCCCHH-----HHHHHHHHHHHH
Confidence            5899999999999999999999987       899999983    22221    112222211     000 00011122


Q ss_pred             c--CCccEEEEeCCCCCC-C---CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          81 F--KDANIAILIGSFPRK-S---NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        81 l--~~aDiVi~~~g~~~~-~---g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      +  .+.|+||+.+|.... +   ..   .....+..|+.....+.+.+.++..+.+.||++|-..
T Consensus        68 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  132 (236)
T 1ooe_A           68 LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  132 (236)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             hCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            3  478999999986431 1   11   2334567788877777777766542346777776543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.76  E-value=4.3e-05  Score=68.14  Aligned_cols=124  Identities=18%  Similarity=0.136  Sum_probs=71.7

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~   77 (329)
                      ||.+.+.+.|+||+|++|.+++..|++.|.       +|++.+.+.   .+.++....++........   .+++-..+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~-------~Vv~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   92 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGF-------TVVINYAGK---AAAAEEVAGKIEAAGGKALTAQADVSDPAAV   92 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTC-------EEEEEESSC---SHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEcCCC---HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            455567899999999999999999999987       888876541   3333333333332210000   011000111


Q ss_pred             -------ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 -------ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 -------~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                             .+.+...|++|..||......   .+   ....+..|+.....+++.+.+...+.+.||+++-
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A           93 RRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             HHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence                   112347899999998653211   12   3455667888777777666655434567777764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.76  E-value=3.9e-05  Score=67.23  Aligned_cols=119  Identities=14%  Similarity=0.123  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec---Ccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE---NPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~---~~~~a   80 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........++.-..   ...+.
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGS-------KVIISGSN----EEKLKSLGNALKDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh
Confidence            457899999999999999999999987       89999998    55554433333221000000010000   11122


Q ss_pred             cCCccEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q psy9582          81 FKDANIAILIGSFPRK------SNMERSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~------~g~~~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tNP  135 (329)
                      +...|++|+.+|....      ...+....+..|+.....+    .+.+.+.  ..+.||++|-.
T Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~isS~  144 (249)
T 3f9i_A           82 TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK--RYGRIINISSI  144 (249)
T ss_dssp             CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCC
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCcEEEEEccH
Confidence            3478999999886431      1123455566666554444    4444443  35677777643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.75  E-value=3.6e-05  Score=67.25  Aligned_cols=117  Identities=10%  Similarity=0.097  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------c
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------I   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------~   78 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+.       .
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGH-------QVSMMGRR----YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999987       89999998    4555443333321100000011000111       1


Q ss_pred             cccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEc
Q psy9582          79 TAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVG  133 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~t  133 (329)
                      +.+...|++|+.+|.... +  ..+   ....+..|+.....+++.+.+... ..+.||+++
T Consensus        73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~is  134 (235)
T 3l6e_A           73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVL  134 (235)
T ss_dssp             HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence            223467999999987432 1  122   334566777766555544433321 233666665

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.75  E-value=5e-05  Score=67.01  Aligned_cols=118  Identities=13%  Similarity=0.085  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA----   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a----   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+..++    
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGA-------RVVLADVL----DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       89999998    4444432222211000000011000111122    


Q ss_pred             ---cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 ---FKDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ---l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                         +...|++|+.+|.....   ..+   ....+..|+...    +.+.+.+++.  ..+.||+++-.
T Consensus        74 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  139 (254)
T 1hdc_A           74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA--GGGSIVNISSA  139 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEECch
Confidence               23789999999865321   122   334456665544    4566666654  34677777643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.75  E-value=7e-05  Score=66.89  Aligned_cols=117  Identities=14%  Similarity=0.167  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecC------c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHEN------P   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~------~   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++    .++++....++.....+  ..+. +..|      .
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v   98 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGL-------KVVGCART----VGNIEELAAECKSAGYP--GTLIPYRCDLSNEEDI   98 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCS--SEEEEEECCTTCHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECC----hHHHHHHHHHHHhcCCC--ceEEEEEecCCCHHHH
Confidence            46899999999999999999999987       89999998    44444333333321100  0111 1111      1


Q ss_pred             ccc-------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITA-------FKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~a-------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .++       +.+.|+||.++|.....   ..+   ....+..|+..    .+.+.+.+++...+.+.||+++-
T Consensus        99 ~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS  172 (279)
T 1xg5_A           99 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  172 (279)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence            112       23789999998864321   112   33456667766    67777777765312367777764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.75  E-value=2.8e-05  Score=69.63  Aligned_cols=97  Identities=19%  Similarity=0.218  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--   82 (329)
                      .+||.|+||+|++|++++..|+..|.       +|+.++++    .       .|+.+.           .+..++++  
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~-------~Dl~d~-----------~~~~~~~~~~   62 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNV-------EVIPTDVQ----D-------LDITNV-----------LAVNKFFNEK   62 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSE-------EEEEECTT----T-------CCTTCH-----------HHHHHHHHHH
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCC-------eEEeccCc----c-------CCCCCH-----------HHHHHHHHhc
Confidence            47999999999999999999999886       89999886    1       133221           11233444  


Q ss_pred             CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++|+||++++.....  ..+....+..|+.....+++.+.+.. .  .+|++|
T Consensus        63 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~--~iv~~S  112 (292)
T 1vl0_A           63 KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A--EIVQIS  112 (292)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C--EEEEEE
T ss_pred             CCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEec
Confidence            799999998864311  12455667889999999999988863 3  555554

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.74  E-value=2.5e-05  Score=69.84  Aligned_cols=96  Identities=19%  Similarity=0.239  Sum_probs=69.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      |||.|+||+|++|++++..|+..|.       +|+.+++.    .       .|+.+..           ...++++  +
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~-------~D~~d~~-----------~~~~~~~~~~   56 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEY-------DIYPFDKK----L-------LDITNIS-----------QVQQVVQEIR   56 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTE-------EEEEECTT----T-------SCTTCHH-----------HHHHHHHHHC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC-------EEEEeccc----c-------cCCCCHH-----------HHHHHHHhcC
Confidence            4899999999999999999998886       89999886    1       1332211           1233444  6


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|+||++++.....  ..+....+..|+.....+++.+.+.. .  .+|.+|
T Consensus        57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~v~~S  105 (287)
T 3sc6_A           57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A--KLVYIS  105 (287)
T ss_dssp             CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C--EEEEEE
T ss_pred             CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEc
Confidence            89999998865421  13566778899999999999998874 3  455554

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.74  E-value=2.1e-05  Score=69.46  Aligned_cols=122  Identities=16%  Similarity=0.136  Sum_probs=68.6

Q ss_pred             CCC--CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec-CCcccccchhhhHhhhhhcccCC---ccceEee
Q psy9582           1 MLK--KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA-SNKKSQKAIKGVIMEIEDCIFPL---LVDVSVH   74 (329)
Q Consensus         1 ~~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~   74 (329)
                      ||+  +.++|.|+||+|++|.+++..|++.|.       +|++.++ +    .+.++....++.......   ..++.-.
T Consensus         1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~   69 (261)
T 1gee_A            1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKA-------KVVVNYRSK----EDEANSVLEEIKKVGGEAIAVKGDVTVE   69 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTSH
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEcCCC----hHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            553  347899999999999999999999987       8999999 5    333333333332211000   0000000


Q ss_pred             cCccccc-------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          75 ENPITAF-------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 ~~~~~al-------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                      .+..+.+       .+.|+||+.+|.....   ..+   ....+..|+.....+    .+.+.+. .+.+.||++|-
T Consensus        70 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~iv~isS  145 (261)
T 1gee_A           70 SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN-DIKGTVINMSS  145 (261)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCCEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEeCC
Confidence            1111222       3789999998865321   122   234455666554444    4444443 12457777764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=97.74  E-value=2.5e-05  Score=72.14  Aligned_cols=107  Identities=12%  Similarity=0.169  Sum_probs=65.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~   82 (329)
                      |||.|+||+|++|++++..|+.. +.       +|+++|++..  ....+. ..++.... ... ..++.-..+..++++
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~-------~V~~~~r~~~--~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   70 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD-------TVVNIDKLTY--AGNLES-LSDISESNRYNFEHADICDSAEITRIFE   70 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC-------EEEEEECCCT--TCCGGG-GTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC-------eEEEEecCCC--CCchhh-hhhhhcCCCeEEEECCCCCHHHHHHHHh
Confidence            47999999999999999999986 55       8999998621  011111 11111100 000 001111112234555


Q ss_pred             --CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          83 --DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        83 --~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                        ++|+||++++.....  ..+....+..|+.....+++.+.+.
T Consensus        71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  114 (361)
T 1kew_A           71 QYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY  114 (361)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHH
T ss_pred             hcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence              899999998864310  1133456788999999998888876

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.74  E-value=0.00014  Score=63.86  Aligned_cols=111  Identities=11%  Similarity=0.068  Sum_probs=69.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-hHhhhhhcccCCccceEeecCccccc-CC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-VIMEIEDCIFPLLVDVSVHENPITAF-KD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-~~~dl~~~~~~~~~~i~~~~~~~~al-~~   83 (329)
                      ++|.|+||+|++|.+++..|++.|.       +|++.|+++    ++++. ...|+.+...     +   ....+.+ ..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~----~~~~~~~~~Dl~~~~~-----v---~~~~~~~~~~   62 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-------QIVGIDIRD----AEVIADLSTAEGRKQA-----I---ADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSS----SSEECCTTSHHHHHHH-----H---HHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCc----hhhccccccCCCCHHH-----H---HHHHHHhCCC
Confidence            3699999999999999999999987       899999983    22211 3345544310     0   0001122 46


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCch
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNPV  136 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP~  136 (329)
                      .|++|+.+|..... ......+..|+.....+.+.+.++.  ...+.||++|-..
T Consensus        63 id~lv~~Ag~~~~~-~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           63 MDGLVLCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CSEEEECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCc-ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            69999999875411 2356667777766655555544321  1246777776543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.74  E-value=7.8e-05  Score=65.53  Aligned_cols=119  Identities=14%  Similarity=0.147  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+.       
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   74 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGA-------TVIVSDIN----AEGAKAAAASIGKKARAIAADISDPGSVKALFAEI   74 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            47899999999999999999999987       89999998    4444433333311100000111100111       


Q ss_pred             ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.+...|++|..+|.... +  ..+   ....+..|+.....    +.+.+.+.. +.+.||+++--
T Consensus        75 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~  141 (247)
T 3rwb_A           75 QALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG-KAGRVISIASN  141 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCT
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCcEEEEECch
Confidence            1223478999999886532 1  122   33455666665444    444566653 45777777643

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.74  E-value=7.9e-05  Score=66.44  Aligned_cols=118  Identities=16%  Similarity=0.154  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI------   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~------   78 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+..      
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARAGA-------RVVLADLP----ETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECT----TSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       89999998    44454433333111000000111001111      


Q ss_pred             -cccCCccEEEEeCCCCCC-C----CCC---HHHHHHHHHHHHHHHHHH----HhhhcCCCeEEEEEcCc
Q psy9582          79 -TAFKDANIAILIGSFPRK-S----NME---RSELLAINSSIFIEQGKA----LNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 -~al~~aDiVi~~~g~~~~-~----g~~---~~~~~~~n~~~~~~i~~~----i~~~~~p~a~viv~tNP  135 (329)
                       +.+...|++|+.+|.... .    ..+   ....+..|+.....+++.    +.+.  ..+.||+++-.
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS~  147 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA--GGGAIVNISSA  147 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEECCG
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEECCH
Confidence             223478999999987522 1    122   334566777655555444    4553  45677777643

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.74  E-value=2.1e-05  Score=63.26  Aligned_cols=95  Identities=15%  Similarity=0.164  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|..++..|...+.       +|.++|++    .++++..+..+.       ..+....+..++++++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~-------~v~v~~r~----~~~~~~~a~~~~-------~~~~~~~~~~~~~~~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQY-------KVTVAGRN----IDHVRAFAEKYE-------YEYVLINDIDSLIKNN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTC-------EEEEEESC----HHHHHHHHHHHT-------CEEEECSCHHHHHHTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEcCC----HHHHHHHHHHhC-------CceEeecCHHHHhcCC
Confidence            479999998 9999999998887765       89999998    555543333322       1233445667888999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      |+||.+.+.+. +-..                  .... .+..+++.+++|.++
T Consensus        82 Divi~at~~~~-~~~~------------------~~~l-~~g~~vid~~~p~~~  115 (144)
T 3oj0_A           82 DVIITATSSKT-PIVE------------------ERSL-MPGKLFIDLGNPPNI  115 (144)
T ss_dssp             SEEEECSCCSS-CSBC------------------GGGC-CTTCEEEECCSSCSB
T ss_pred             CEEEEeCCCCC-cEee------------------HHHc-CCCCEEEEccCCccC
Confidence            99999865442 1111                  0112 367788999998654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.73  E-value=5.3e-05  Score=66.41  Aligned_cols=118  Identities=16%  Similarity=0.168  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec-CCcccccchhhhHhhhhhcccCCc---cceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA-SNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.++ +    .++++....++........   .+++-..+..+.
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGA-------NVVVNYAGN----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNM   72 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999987       8999998 5    3444433333322110000   011000111112


Q ss_pred             -------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 -------FKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 -------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                             +...|++|+.+|.....   ..+   ....+..|+..    .+.+.+.+++.  ..+.||++|--
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  142 (246)
T 2uvd_A           73 VKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ--RHGRIVNIASV  142 (246)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECCH
Confidence                   23789999999875421   122   33456667665    55556666554  34677777643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.73  E-value=2.4e-05  Score=69.08  Aligned_cols=120  Identities=10%  Similarity=0.095  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-C--CccceE-eec-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-P--LLVDVS-VHE-----   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~--~~~~i~-~~~-----   75 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++..... .  ...++. +..     
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   75 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGA-------TVAACDLD----RAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA   75 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHTC------------CCEEEECCTTSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence            46899999999999999999999987       89999998    4444333222221100 0  000111 111     


Q ss_pred             -CcccccCC-------c-cEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcCc
Q psy9582          76 -NPITAFKD-------A-NIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGNP  135 (329)
Q Consensus        76 -~~~~al~~-------a-DiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tNP  135 (329)
                       +..+++++       . |+||+.+|.....   ..+   ....+..|+.....+.+.+.+..   ...+.||++|-.
T Consensus        76 ~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  153 (264)
T 2pd6_A           76 RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSI  153 (264)
T ss_dssp             HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECCh
Confidence             11222333       3 9999998865421   112   33455667665555555444331   124677777654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.73  E-value=0.00031  Score=62.30  Aligned_cols=116  Identities=15%  Similarity=0.138  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecC-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHEN-------   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~-------   76 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.... +. ..+. +..|       
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~-~~-~~~~~~~~D~~~~~~~   76 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGA-------NVLINGRR----EENVNETIKEIRAQY-PD-AILQPVVADLGTEQGC   76 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHC-TT-CEEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhC-CC-ceEEEEecCCCCHHHH
Confidence            46899999999999999999999987       89999998    454544444443221 00 0010 1111       


Q ss_pred             --cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 --PITAFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                        ..+.+...|++|+.+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||+++-.
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  145 (267)
T 3t4x_A           77 QDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER--KEGRVIFIASE  145 (267)
T ss_dssp             HHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TEEEEEEECCG
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCEEEEEcch
Confidence              123345789999999865322   122   33446667665    55556666553  45677777643

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.73  E-value=4.1e-05  Score=70.65  Aligned_cols=98  Identities=16%  Similarity=0.107  Sum_probs=67.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC-----CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD-----LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~-----~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~   79 (329)
                      +||.|+||+|++|++++..|+..|     .       +|+++|++.    ....     +....... ..++.-..+..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~-------~V~~~~r~~----~~~~-----~~~~~~~~~~~Dl~d~~~~~~   65 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPW-------KVYGVARRT----RPAW-----HEDNPINYVQCDISDPDDSQA   65 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSE-------EEEEEESSC----CCSC-----CCSSCCEEEECCTTSHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCce-------EEEEEeCCC----Cccc-----cccCceEEEEeecCCHHHHHH
Confidence            689999999999999999999877     5       899999982    2111     00000000 001100112345


Q ss_pred             ccCC---ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          80 AFKD---ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        80 al~~---aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      ++++   +|+||++++...   .+..+....|+.....+++.+.+.
T Consensus        66 ~~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~  108 (364)
T 2v6g_A           66 KLSPLTDVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPN  108 (364)
T ss_dssp             HHTTCTTCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHhcCCCCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHh
Confidence            6777   999999988653   345667889999999999999886

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.73  E-value=0.00012  Score=65.56  Aligned_cols=126  Identities=12%  Similarity=0.134  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc--------ccchhhhHhhhhhcccCCc---cceE
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS--------QKAIKGVIMEIEDCIFPLL---VDVS   72 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~--------~~~~~~~~~dl~~~~~~~~---~~i~   72 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++....        .+.++....++........   .+++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   81 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-------DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR   81 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC
Confidence            357899999999999999999999997       899999872110        1112222222222110000   0110


Q ss_pred             eecCccc-------ccCCccEEEEeCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          73 VHENPIT-------AFKDANIAILIGSFPRKS-N---MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        73 ~~~~~~~-------al~~aDiVi~~~g~~~~~-g---~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      -..+..+       .+...|++|+.||..... .   ......+..|+.....+.+.+.++....+.||+++--.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            0011111       223789999998864321 1   22445678888888888888877754566777777544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.73  E-value=4.4e-05  Score=64.56  Aligned_cols=108  Identities=9%  Similarity=0.036  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +|||.|+||+|++|++++..|+ .|.       +|+++|++    .+.   ...|+.+..     .+   ....+.+...
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~-------~V~~~~r~----~~~---~~~D~~~~~-----~~---~~~~~~~~~~   59 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKA-------EVITAGRH----SGD---VTVDITNID-----SI---KKMYEQVGKV   59 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTS-------EEEEEESS----SSS---EECCTTCHH-----HH---HHHHHHHCCE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCC-------eEEEEecC----ccc---eeeecCCHH-----HH---HHHHHHhCCC
Confidence            4689999999999999999999 876       89999998    321   223443221     00   0011122458


Q ss_pred             cEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+||+++|......   .+   ....+..|+.....+.+.+.+.....+.++++|-.
T Consensus        60 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~  116 (202)
T 3d7l_A           60 DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGI  116 (202)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcch
Confidence            99999988643211   12   23445678887778877777653223566666643

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.72  E-value=0.00014  Score=64.68  Aligned_cols=117  Identities=16%  Similarity=0.140  Sum_probs=68.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~---   78 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.......   ..++.-..+..   
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKLKS-------KLVLWDIN----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEEcC----HHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    444443333333211000   00110000111   


Q ss_pred             ----cccCCccEEEEeCCCCCCCC---C---CHHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ----TAFKDANIAILIGSFPRKSN---M---ERSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~~g---~---~~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                          +.+.+.|+||..+|......   .   .....+..|+...    +.+.+.+.+.  ..+.||++|-
T Consensus       100 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~~iv~isS  167 (272)
T 1yb1_A          100 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN--NHGHIVTVAS  167 (272)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEEec
Confidence                12347899999998654211   1   1234556666654    4444444443  3566777764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.72  E-value=5.8e-05  Score=66.80  Aligned_cols=118  Identities=12%  Similarity=0.123  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF---   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al---   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+..+++   
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGA-------TVAIADLD----VMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       89999998    44443332222210000000110001112222   


Q ss_pred             ----CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          82 ----KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ----~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                          .+.|+||+.+|.....   ..+   ....+..|+.....+    .+.+.+. ...+.||+++-
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~g~iv~isS  146 (263)
T 3ak4_A           81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS-NTKGVIVNTAS  146 (263)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCCEEEEECC
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEEecc
Confidence                3789999999865321   122   334556666544444    4444432 12456777654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=97.72  E-value=6e-05  Score=70.52  Aligned_cols=119  Identities=12%  Similarity=0.109  Sum_probs=70.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccc-----cchhhhHhhhhhcccCC-ccc---eE-ee
Q psy9582           6 VRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQ-----KAIKGVIMEIEDCIFPL-LVD---VS-VH   74 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~-----~~~~~~~~dl~~~~~~~-~~~---i~-~~   74 (329)
                      |+|.|+||+|++|++++..|+ ..|.       +|+++|++.....     +........+.+..... ...   +. +.
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNH-------SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV   75 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-------EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCC-------EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEE
Confidence            589999999999999999999 8886       8999998721100     00111110011110000 000   11 11


Q ss_pred             c------CcccccC--C-ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          75 E------NPITAFK--D-ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        75 ~------~~~~al~--~-aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .      ...++++  + .|+||++++.....  ..+....+..|+.....+++.+.+.. .. .||++|
T Consensus        76 ~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~-~iv~~S  143 (397)
T 1gy8_A           76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CD-KIIFSS  143 (397)
T ss_dssp             SCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             CCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CC-EEEEEC
Confidence            1      1233454  5 99999998864311  12345677889999999999988753 44 444444

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.72  E-value=7.9e-05  Score=66.21  Aligned_cols=120  Identities=15%  Similarity=0.056  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cC-CccceEeecCccccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FP-LLVDVSVHENPITAF-   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~-~~~~i~~~~~~~~al-   81 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|++.|++    .+..+....++.... .. ...+++-..+..+++ 
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGA-------KVVIADIA----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCC----hhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            46899999999999999999999987       89999998    333332222221100 00 000110001111222 


Q ss_pred             ------CCccEEEEeCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          82 ------KDANIAILIGSFPRK---S--NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        82 ------~~aDiVi~~~g~~~~---~--g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                            .+.|+||+.+|....   +  ..+   ....+..|+.....+.+.+.+..  ...+.||+++-.
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  154 (278)
T 2bgk_A           85 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI  154 (278)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeec
Confidence                  378999999886431   1  122   33456667766665555544431  134677777643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.72  E-value=5.2e-05  Score=67.80  Aligned_cols=119  Identities=14%  Similarity=0.175  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------   77 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+.       
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGY-------GVALAGRR----LDALQETAAEIGDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Confidence            35688899999999999999999987       89999998    5555443333321100000011000111       


Q ss_pred             ccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITAFKDANIAILIGSFPRK--S--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .+.+...|++|..+|....  +  ..+   ....+..|+..    ++.+.+.+.+...+.+.||+++-
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS  164 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS  164 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECc
Confidence            1223478999999987432  1  122   33455666665    55555666654212567777764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.72  E-value=6.3e-05  Score=67.39  Aligned_cols=123  Identities=11%  Similarity=0.152  Sum_probs=71.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPI   78 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~   78 (329)
                      |.+.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++........   .+++-..+..
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~   89 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGI-------AVYGCARD----AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVH   89 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            44457899999999999999999999987       89999998    5555544444433210000   0110001111


Q ss_pred             -------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh----cCCCeEEEEEcCc
Q psy9582          79 -------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSV----ASRDVKVLVVGNP  135 (329)
Q Consensus        79 -------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~----~~p~a~viv~tNP  135 (329)
                             +.+...|++|+.+|.....   ..+   ....+..|+.....+++.+.+.    ....+.||+++-.
T Consensus        90 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~  163 (279)
T 3sju_A           90 AAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIAST  163 (279)
T ss_dssp             HHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCG
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECCh
Confidence                   1234679999999865321   122   3345667777666655544331    0134677777643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.72  E-value=3.3e-05  Score=68.43  Aligned_cols=120  Identities=15%  Similarity=0.154  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCc---cceEeecCc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP   77 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~   77 (329)
                      |.+.+++.|+||+|++|.+++..|++.|.       +|++. +++    .+.++....++........   .+++-..+.
T Consensus         1 M~~~k~vlVTGas~gIG~aia~~l~~~G~-------~vv~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   69 (258)
T 3oid_A            1 MEQNKCALVTGSSRGVGKAAAIRLAENGY-------NIVINYARS----KKAALETAEEIEKLGVKVLVVKANVGQPAKI   69 (258)
T ss_dssp             --CCCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHCCC-------EEEEEcCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence            34457899999999999999999999987       88886 666    4444444444432210000   011100111


Q ss_pred             ccc-------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          78 ITA-------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~a-------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                      .+.       +..-|++|+.+|.....   ..+   ....+..|+.....+    .+.+.+.  ..+.||+++-
T Consensus        70 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--~~g~iv~isS  141 (258)
T 3oid_A           70 KEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN--GGGHIVSISS  141 (258)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT--TCEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECc
Confidence            122       23569999998864321   122   233456666554444    4444543  3567777653

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.70  E-value=5.8e-05  Score=69.88  Aligned_cols=90  Identities=13%  Similarity=0.137  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--   82 (329)
                      .+||+|||+ |.||.+++..|...|.       +|+++|++    .+.++. +.+   .  .    +..+.+..++++  
T Consensus         8 ~~kIgIIG~-G~mG~slA~~L~~~G~-------~V~~~dr~----~~~~~~-a~~---~--G----~~~~~~~~e~~~~a   65 (341)
T 3ktd_A            8 SRPVCILGL-GLIGGSLLRDLHAANH-------SVFGYNRS----RSGAKS-AVD---E--G----FDVSADLEATLQRA   65 (341)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSC----HHHHHH-HHH---T--T----CCEESCHHHHHHHH
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH-HHH---c--C----CeeeCCHHHHHHhc
Confidence            379999998 9999999999999886       89999998    443331 111   1  1    123345555555  


Q ss_pred             --CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 --DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 --~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        ++|+||++.  |.              ..+.++.+.+..+ .|+++|+.++
T Consensus        66 ~~~aDlVilav--P~--------------~~~~~vl~~l~~~-~~~~iv~Dv~  101 (341)
T 3ktd_A           66 AAEDALIVLAV--PM--------------TAIDSLLDAVHTH-APNNGFTDVV  101 (341)
T ss_dssp             HHTTCEEEECS--CH--------------HHHHHHHHHHHHH-CTTCCEEECC
T ss_pred             ccCCCEEEEeC--CH--------------HHHHHHHHHHHcc-CCCCEEEEcC
Confidence              579999983  21              2344555666666 5788776665

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.70  E-value=1.8e-05  Score=73.88  Aligned_cols=118  Identities=12%  Similarity=0.008  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc-ccchhhhHhhhhhcccCCccceEe-ec------Cc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS-QKAIKGVIMEIEDCIFPLLVDVSV-HE------NP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~~~~~~~~~dl~~~~~~~~~~i~~-~~------~~   77 (329)
                      ++|.|+||+|++|++++..|+..|.       +|++++++.... ...+.....+..... +  ..+.. ..      +.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~Dl~d~~~~   98 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY-------EVHGLIRRSSNFNTQRINHIYIDPHNVN-K--ALMKLHYADLTDASSL   98 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-------EEEEEecCCccccchhhhhhhhcccccc-c--cceEEEECCCCCHHHH
Confidence            4899999999999999999999886       899999872110 001111110100000 0  01111 11      12


Q ss_pred             ccccCC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcC---CCeEEEEEc
Q psy9582          78 ITAFKD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVAS---RDVKVLVVG  133 (329)
Q Consensus        78 ~~al~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~---p~a~viv~t  133 (329)
                      .+++++  .|+||++++.....  ..+....+..|+.....+++.+.+...   +.+.||++|
T Consensus        99 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S  161 (381)
T 1n7h_A           99 RRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  161 (381)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             HHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence            344554  59999998864311  123445667788888888888777531   123666655

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.70  E-value=0.00015  Score=63.95  Aligned_cols=120  Identities=15%  Similarity=0.164  Sum_probs=67.8

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc--
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP--   77 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~--   77 (329)
                      ||. +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+. +....++......+  +++-..+.  
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~-~~~~~~~~~~~~~~--D~~~~~~~~~   66 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGA-------LVALCDLR----PEG-KEVAEAIGGAFFQV--DLEDERERVR   66 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----TTH-HHHHHHHTCEEEEC--CTTCHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----hhH-HHHHHHhhCCEEEe--eCCCHHHHHH
Confidence            553 357899999999999999999999987       89999998    332 22222221000000  01000011  


Q ss_pred             -----ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          78 -----ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        78 -----~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                           .+.+...|++|+.+|.....   ..+   ....+..|+.....+.+.+.++.  ...+.||++|-
T Consensus        67 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS  136 (256)
T 2d1y_A           67 FVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVAS  136 (256)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence                 12234789999998865321   122   33456677765555544433221  13467777764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.70  E-value=0.0001  Score=64.21  Aligned_cols=120  Identities=11%  Similarity=0.128  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc--
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF--   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al--   81 (329)
                      +.+++.|+||+|++|++++..|++.|.       +|+++|++    .+.++....++.... ....++.-..+..+++  
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~   73 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-------KVVAVTRT----NSDLVSLAKECPGIE-PVCVDLGDWDATEKALGG   73 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHhccCCC-cEEecCCCHHHHHHHHHH
Confidence            357999999999999999999999987       89999998    433332221111000 0000110001122233  


Q ss_pred             -CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcCc
Q psy9582          82 -KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGNP  135 (329)
Q Consensus        82 -~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tNP  135 (329)
                       ...|+||+++|.....   ..+   ....+..|+.....+.+.+.+..   ...+.||++|-.
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~  137 (244)
T 1cyd_A           74 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM  137 (244)
T ss_dssp             CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             cCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch
Confidence             3579999998864321   112   23455667766555554443321   124677777653

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.69  E-value=5.7e-05  Score=68.25  Aligned_cols=104  Identities=15%  Similarity=0.121  Sum_probs=61.6

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc-ccchhhhHhhhhhcccC-CccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS-QKAIKGVIMEIEDCIFP-LLVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~   79 (329)
                      |++++||.|+||+|++|++++..|+..|.       +|++++++.... .++.+ ....+...... ...++.-..++.+
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~l~~   72 (313)
T 1qyd_A            1 MDKKSRVLIVGGTGYIGKRIVNASISLGH-------PTYVLFRPEVVSNIDKVQ-MLLYFKQLGAKLIEASLDDHQRLVD   72 (313)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCSCCSSCHHHHH-HHHHHHTTTCEEECCCSSCHHHHHH
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCC-------cEEEEECCCcccchhHHH-HHHHHHhCCeEEEeCCCCCHHHHHH
Confidence            44457899999999999999999999886       899999972110 11111 11112111100 0011211223567


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      +++++|+||++++.....         .|+...+.+++.+++.
T Consensus        73 ~~~~~d~vi~~a~~~~~~---------~~~~~~~~l~~aa~~~  106 (313)
T 1qyd_A           73 ALKQVDVVISALAGGVLS---------HHILEQLKLVEAIKEA  106 (313)
T ss_dssp             HHTTCSEEEECCCCSSSS---------TTTTTHHHHHHHHHHS
T ss_pred             HHhCCCEEEECCccccch---------hhHHHHHHHHHHHHhc
Confidence            899999999988754211         1344456677777764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.69  E-value=9.3e-05  Score=67.29  Aligned_cols=92  Identities=17%  Similarity=0.224  Sum_probs=62.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||- |.+|+.+|..|++.|+       +|+.||++    .++.+.    +.+.      ..+...+..++.+++|
T Consensus         4 ~kIgfIGl-G~MG~~mA~~L~~~G~-------~v~v~dr~----~~~~~~----l~~~------Ga~~a~s~~e~~~~~d   61 (300)
T 3obb_A            4 KQIAFIGL-GHMGAPMATNLLKAGY-------LLNVFDLV----QSAVDG----LVAA------GASAARSARDAVQGAD   61 (300)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSS----HHHHHH----HHHT------TCEECSSHHHHHTTCS
T ss_pred             CEEEEeee-hHHHHHHHHHHHhCCC-------eEEEEcCC----HHHHHH----HHHc------CCEEcCCHHHHHhcCC
Confidence            58999998 9999999999999998       99999999    554442    3322      1334456778899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKA---LNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~---i~~~~~p~a~viv~tN  134 (329)
                      +||.+-.               +-+.++++...   +.....|..++|..|+
T Consensus        62 vv~~~l~---------------~~~~v~~V~~~~~g~~~~~~~g~iiId~sT   98 (300)
T 3obb_A           62 VVISMLP---------------ASQHVEGLYLDDDGLLAHIAPGTLVLECST   98 (300)
T ss_dssp             EEEECCS---------------CHHHHHHHHHSSSSSTTSCCC-CEEEECSC
T ss_pred             ceeecCC---------------chHHHHHHHhchhhhhhcCCCCCEEEECCC
Confidence            9999732               12455555432   2233345667777764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.69  E-value=0.00019  Score=63.96  Aligned_cols=68  Identities=10%  Similarity=0.012  Sum_probs=46.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      +||.|+|| |++|++++..|++.|.       +|+.++++    ..+...    +....... ..++   ++. + ++++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~D~---~d~-~-~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGW-------RIIGTSRN----PDQMEA----IRASGAEPLLWPG---EEP-S-LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTC-------EEEEEESC----GGGHHH----HHHTTEEEEESSS---SCC-C-CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCC-------EEEEEEcC----hhhhhh----HhhCCCeEEEecc---ccc-c-cCCC
Confidence            58999998 9999999999999887       89999998    333321    11110000 0011   122 2 8899


Q ss_pred             cEEEEeCCCC
Q psy9582          85 NIAILIGSFP   94 (329)
Q Consensus        85 DiVi~~~g~~   94 (329)
                      |+||++++..
T Consensus        65 d~vi~~a~~~   74 (286)
T 3ius_A           65 THLLISTAPD   74 (286)
T ss_dssp             CEEEECCCCB
T ss_pred             CEEEECCCcc
Confidence            9999998754

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.69  E-value=4.6e-05  Score=68.70  Aligned_cols=64  Identities=17%  Similarity=0.252  Sum_probs=48.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.+|..++..|...|.       +|+++|++    .++++.    +.+.      .+..+.+..++++++|
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~-------~V~~~~~~----~~~~~~----~~~~------g~~~~~~~~~~~~~~D   58 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGY-------PLIIYDVF----PDACKE----FQDA------GEQVVSSPADVAEKAD   58 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTC-------CEEEECSS----THHHHH----HHTT------TCEECSSHHHHHHHCS
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH----HHHc------CCeecCCHHHHHhcCC
Confidence            47999998 9999999999998886       89999998    444432    2221      2344556677788999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +||++.
T Consensus        59 vvi~~v   64 (296)
T 2gf2_A           59 RIITML   64 (296)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            999973

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.68  E-value=0.00011  Score=64.81  Aligned_cols=118  Identities=16%  Similarity=0.173  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a-   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.......   ..+++-..+..++ 
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   77 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGA-------SVYTCSRN----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELM   77 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    444443333333211000   0011000011112 


Q ss_pred             ------c-CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEcCc
Q psy9582          81 ------F-KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKAL----NSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 ------l-~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~tNP  135 (329)
                            + ...|++|+.+|.....   ..+   ....+..|+.....+.+.+    .+.  ..+.||++|--
T Consensus        78 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  147 (260)
T 2ae2_A           78 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS--ERGNVVFISSV  147 (260)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--SSEEEEEECCG
T ss_pred             HHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcch
Confidence                  2 5789999999865321   122   3345566766555554444    442  35677777643

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.68  E-value=5.7e-05  Score=66.89  Aligned_cols=119  Identities=13%  Similarity=0.074  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC---ccceEeecCccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL---LVDVSVHENPIT   79 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~---~~~i~~~~~~~~   79 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++... ....   ..+++-..+..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   74 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-------HIVLVARQ----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDA   74 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            347899999999999999999999987       89999998    44444333333221 1000   001100011112


Q ss_pred             c-------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 A-------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 a-------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +       +.+.|++|+.+|.....   ..+   ....+..|+.....    +.+.+.+.  ..+.||+++-.
T Consensus        75 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~  145 (263)
T 3ai3_A           75 VVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR--GGGAIIHNASI  145 (263)
T ss_dssp             HHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECch
Confidence            2       23789999999865321   122   23445556554444    44444443  34677777643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.68  E-value=8.4e-05  Score=65.19  Aligned_cols=119  Identities=16%  Similarity=0.162  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI-----   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~-----   78 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++. .. ....+++-..+..     
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~-~~-~~~~D~~~~~~~~~~~~~   70 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-------RLVACDIE----EGPLREAAEAVG-AH-PVVMDVADPASVERGFAE   70 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTTT-CE-EEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHcC-CE-EEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999987       89999998    444432222111 00 0000110001111     


Q ss_pred             --cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          79 --TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        79 --~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                        +.+...|++|+.+|.....   ..+   ....+..|+.....+++.+.++.  ...+.||++|--
T Consensus        71 ~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~  137 (245)
T 1uls_A           71 ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR  137 (245)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccc
Confidence              1233579999999865321   112   33456677776655555444332  134677777643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=97.68  E-value=7.5e-05  Score=69.17  Aligned_cols=121  Identities=10%  Similarity=0.068  Sum_probs=68.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc-ccchhhhHhhhh--hcccC-CccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS-QKAIKGVIMEIE--DCIFP-LLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~~~~~~~~~dl~--~~~~~-~~~~i~~~~~~~~al   81 (329)
                      ++|.|+||+|++|++++..|+..|.       +|+++|++.... .+.+.....+..  ..... ...++.-..+..+++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGY-------EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECC---------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHH
Confidence            4799999999999999999999886       899999872110 011111100000  00000 001111111223345


Q ss_pred             CC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCC--CeEEEEEcC
Q psy9582          82 KD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASR--DVKVLVVGN  134 (329)
Q Consensus        82 ~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p--~a~viv~tN  134 (329)
                      ++  .|+||++++.....  ..+....+..|+.....+++.+.+.. .  ...+|++|-
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS  132 (372)
T 1db3_A           75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQAST  132 (372)
T ss_dssp             HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEE
T ss_pred             HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCC
Confidence            54  59999998864321  23455667789999999999888863 3  145655553

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.68  E-value=0.0001  Score=58.21  Aligned_cols=33  Identities=21%  Similarity=0.445  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+||+|+|+ |.+|..++..|...+.       +|+++|.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~-------~v~~~d~~   36 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGH-------DIVLIDID   36 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC
Confidence            479999998 9999999999998886       89999998

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=97.68  E-value=0.00014  Score=68.92  Aligned_cols=116  Identities=12%  Similarity=0.149  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--------ccCC----ccceE
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--------IFPL----LVDVS   72 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--------~~~~----~~~i~   72 (329)
                      +++|.|+||+|++|++++..|...+.       +|++++++... .+.++.....+...        ....    ..++.
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~  140 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSH-------RIYCFIRADNE-EIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE  140 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEE-------EEEEEEECSSH-HHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCC-------EEEEEECCCCh-HHHHHHHHHHHHHhccccccccccCceEEEeCCCC
Confidence            46899999999999999999977776       89999998311 00112111111110        0000    01121


Q ss_pred             eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      -..... ++.++|+||++|+..... .+....+..|+...+.+++.+.+ . .. .+|++|
T Consensus       141 d~~~l~-~~~~~d~Vih~A~~~~~~-~~~~~~~~~Nv~g~~~l~~aa~~-~-~~-~~v~~S  196 (427)
T 4f6c_A          141 CMDDVV-LPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQ-H-HA-RLIYVS  196 (427)
T ss_dssp             --CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-T-TC-EEEEEE
T ss_pred             CcccCC-CcCCCCEEEECCcccCCC-CCHHHHHHHHHHHHHHHHHHHHh-c-CC-cEEEEC
Confidence            111222 678999999998865322 34455678899999999999888 3 33 444444

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.68  E-value=5.9e-05  Score=66.68  Aligned_cols=118  Identities=15%  Similarity=0.096  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccc-hhhhHhhhhhc-ccCC---ccceEeecCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKA-IKGVIMEIEDC-IFPL---LVDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~-~~~~~~dl~~~-~~~~---~~~i~~~~~~~~   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+. ++....++... ....   ..+++-..+..+
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   72 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGA-------DIVLNGFG----DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEECCS----CHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCC-------EEEEEeCC----cchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHH
Confidence            46899999999999999999999987       89999998    333 33333333211 0000   001100011111


Q ss_pred             -------ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 -------AFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 -------al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                             .+...|++|+.+|.....   ..+   ....+..|+.    .++.+.+.+++.  ..+.||+++-.
T Consensus        73 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  143 (260)
T 1x1t_A           73 LVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ--GFGRIINIASA  143 (260)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEECcH
Confidence                   233789999999865321   122   3345566666    444455555543  34677777643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.68  E-value=0.00015  Score=63.56  Aligned_cols=119  Identities=14%  Similarity=0.178  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a   80 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|.+.   .++++....++........   .+++-..+..+.
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-------~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-------NVAVNYAGS---KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAM   72 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            346899999999999999999999987       899988862   3334433333432210000   011000111112


Q ss_pred             -------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          81 -------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 -------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                             +...|++|+.+|.....   ..+   ....+..|+.....+.    +.+.+.  ..+.||++|-
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS  141 (246)
T 3osu_A           73 IKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ--RSGAIINLSS  141 (246)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEEcc
Confidence                   23789999999865321   122   3345666766554444    444554  3567777764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=97.68  E-value=6.9e-05  Score=75.87  Aligned_cols=117  Identities=12%  Similarity=0.089  Sum_probs=71.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPIT   79 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~   79 (329)
                      +.++|.|+||+|++|++++..|++.|.       +|+++|++.    ........++........    .++.-..+..+
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~-------~V~~~~r~~----~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~   78 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGY-------DCVVADNLS----NSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEK   78 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS----SCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCC----cchHHHHHHHhhccCCceEEEEcCCCCHHHHHH
Confidence            357999999999999999999999886       899999872    211111111111000000    11111112234


Q ss_pred             ccC--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          80 AFK--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        80 al~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +++  ++|+||++|+.....  .....+.+..|+.....+++.+++.. .. .+|++|
T Consensus        79 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~-~iV~~S  134 (699)
T 1z45_A           79 VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VS-KFVFSS  134 (699)
T ss_dssp             HHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CC-EEEEEE
T ss_pred             HHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEC
Confidence            555  799999998864311  11234567889999999999888763 34 444444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.68  E-value=4.9e-05  Score=65.60  Aligned_cols=109  Identities=10%  Similarity=0.068  Sum_probs=72.2

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      ||. +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+      .|+.+...     +   ....+
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~------~D~~~~~~-----v---~~~~~   55 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHT-------IVHVASRQ----TG------LDISDEKS-----V---YHYFE   55 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTE-------EEEEESGG----GT------CCTTCHHH-----H---HHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEecCC----cc------cCCCCHHH-----H---HHHHH
Confidence            665 356788999999999999999998887       89999988    22      34443210     0   01123


Q ss_pred             ccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          80 AFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .+...|++|+.+|....  +  ..+   ....+..|+.....+.+.+.++..+.+.|++++-
T Consensus        56 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS  117 (223)
T 3uce_A           56 TIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSG  117 (223)
T ss_dssp             HHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecc
Confidence            34678999999886421  1  122   3345678888888888887776544567777764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.68  E-value=0.0001  Score=65.00  Aligned_cols=118  Identities=12%  Similarity=0.115  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.......   ..+++-..+..+.
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-------TVFAGRRN----GEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAF   74 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-------EEEEEESS----GGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHH
Confidence            357899999999999999999999987       89999998    555555444443321000   0011000111122


Q ss_pred             c------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 F------KDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +      ...|++|..+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||+++-
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS  142 (252)
T 3h7a_A           75 LNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH--GQGKIFFTGA  142 (252)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEE
T ss_pred             HHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECC
Confidence            2      3679999999875421   122   23445556554    44455555554  3466666653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.67  E-value=7.6e-05  Score=69.27  Aligned_cols=111  Identities=16%  Similarity=0.092  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccc-eEeecCc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVD-VSVHENP   77 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~-i~~~~~~   77 (329)
                      |+.++++|.|+||+|++|++++..|+..+.       +|++++++    .....  ..++... .... ..+ +.-..+.
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~--~~~l~~~~~v~~v~~D~l~d~~~l   67 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGH-------HVRAQVHS----LKGLI--AEELQAIPNVTLFQGPLLNNVPLM   67 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESC----SCSHH--HHHHHTSTTEEEEESCCTTCHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEECC----CChhh--HHHHhhcCCcEEEECCccCCHHHH
Confidence            444468999999999999999999998876       89999988    33221  1122211 0000 011 1111224


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .++++++|.||+.++...   .      ..|... +.+++.+++..+.. .+|.+|-.
T Consensus        68 ~~~~~~~d~Vi~~a~~~~---~------~~~~~~-~~l~~aa~~~g~v~-~~V~~SS~  114 (352)
T 1xgk_A           68 DTLFEGAHLAFINTTSQA---G------DEIAIG-KDLADAAKRAGTIQ-HYIYSSMP  114 (352)
T ss_dssp             HHHHTTCSEEEECCCSTT---S------CHHHHH-HHHHHHHHHHSCCS-EEEEEECC
T ss_pred             HHHHhcCCEEEEcCCCCC---c------HHHHHH-HHHHHHHHHcCCcc-EEEEeCCc
Confidence            567899999998765321   1      124444 77777777752123 55555543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.67  E-value=0.00011  Score=64.28  Aligned_cols=117  Identities=12%  Similarity=0.046  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh-hhcccCC---ccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI-EDCIFPL---LVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl-~~~~~~~---~~~i~~~~~~~~al   81 (329)
                      +++.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++ .......   ..++.-..+..+++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   71 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGD-------RVAALDLS----AETLEETARTHWHAYADKVLRVRADVADEGDVNAAI   71 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            4799999999999999999999986       89999998    44444333333 1100000   00110001112222


Q ss_pred             -------CCccEEEEeCCCCCCCC------CC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          82 -------KDANIAILIGSFPRKSN------ME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 -------~~aDiVi~~~g~~~~~g------~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                             .+.|+||+.+|......      .+   ....+..|+...    +.+.+.+.+.  ..+.||+++-.
T Consensus        72 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS~  143 (250)
T 2cfc_A           72 AATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ--GAGVIVNIASV  143 (250)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCEEEEECCh
Confidence                   37899999988643211      12   233455666544    4455555553  34567776643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.67  E-value=4.3e-05  Score=67.97  Aligned_cols=122  Identities=16%  Similarity=0.122  Sum_probs=70.8

Q ss_pred             CCC--CCCEEEEEcC--CCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccc-hhhhHhhhhhcccCCccceEeec
Q psy9582           1 MLK--KPVRISITGA--AGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKA-IKGVIMEIEDCIFPLLVDVSVHE   75 (329)
Q Consensus         1 ~~~--~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~-~~~~~~dl~~~~~~~~~~i~~~~   75 (329)
                      ||+  +.+++.|+||  +|++|.+++..|++.|.       +|++.|++    .+. ++....++.........+++-..
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~   69 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGA-------QLVLTGFD----RLRLIQRITDRLPAKAPLLELDVQNEE   69 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-------EEEEEECS----CHHHHHHHHTTSSSCCCEEECCTTCHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCC-------EEEEEecC----hHHHHHHHHHhcCCCceEEEccCCCHH
Confidence            664  3468999998  89999999999999987       89999998    322 22211111100000000110001


Q ss_pred             Ccccc-------cC---CccEEEEeCCCCC------CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 NPITA-------FK---DANIAILIGSFPR------KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 ~~~~a-------l~---~aDiVi~~~g~~~------~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +..+.       +.   ..|++|+.+|...      .+  ..+   ....+..|+.....+++.+.++..+.+.||+++
T Consensus        70 ~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           70 HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence            11112       22   7899999998653      11  122   334567788887788877776542345676665

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.67  E-value=8.5e-05  Score=66.48  Aligned_cols=116  Identities=8%  Similarity=0.042  Sum_probs=70.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecC------c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HEN------P   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~------~   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++...... ...+.. ..|      .
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~-~~~~~~~~~Dv~~~~~v   78 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGA-------SVMIVGRN----PDKLAGAVQELEALGAN-GGAIRYEPTDITNEDET   78 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTCCS-SCEEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhCCC-CceEEEEeCCCCCHHHH
Confidence            46899999999999999999999987       89999998    55555444455432110 001111 111      1


Q ss_pred             ccc-------cCCccEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          78 ITA-------FKDANIAILIGSFPRKS----NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~a-------l~~aDiVi~~~g~~~~~----g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                      .++       +...|++|+.+|.....    ..+   ....+..|+.....++    +.+.+.  ..+.||++|-
T Consensus        79 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS  151 (281)
T 3svt_A           79 ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG--GGGSFVGISS  151 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEeC
Confidence            112       23569999998863221    122   3345666776554444    444442  4567777764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.67  E-value=0.00029  Score=62.18  Aligned_cols=119  Identities=13%  Similarity=0.099  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|+++|++    .++++....++.......   ..++.-..+..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-------VIHTCARN----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKL   81 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            347899999999999999999999987       89999998    444443333333211000   0011000011112


Q ss_pred             c--------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEcCc
Q psy9582          81 F--------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKAL----NSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 l--------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~tNP  135 (329)
                      +        ...|+||+.+|.....   ..+   ....+..|+.....+.+.+    ++.  ..+.||++|-.
T Consensus        82 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~isS~  152 (266)
T 1xq1_A           82 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS--GCGNIIFMSSI  152 (266)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SSCEEEEEC--
T ss_pred             HHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEccc
Confidence            2        5789999998864321   122   3345667777666655544    443  34566666643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.67  E-value=0.00011  Score=65.92  Aligned_cols=121  Identities=19%  Similarity=0.186  Sum_probs=70.6

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecC
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHEN   76 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~   76 (329)
                      ||. +.+.+.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........   .+++-..+
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~   91 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGV-------TVGALGRT----RTEVEEVADEIVGAGGQAIALEADVSDELQ   91 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHTTTTCCEEEEECCTTCHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHH
Confidence            443 346789999999999999999999987       89999998    5555544444433210000   01100001


Q ss_pred             c-------ccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          77 P-------ITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~-------~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                      .       .+.+...|++|..||...  .+  ..+   ....+..|+.....    +.+.+++.  ..+.||++|-
T Consensus        92 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~Iv~isS  165 (283)
T 3v8b_A           92 MRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR--GGGAIVVVSS  165 (283)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCceEEEEcC
Confidence            1       122347899999998642  22  222   33455666654444    44445554  3567777764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.67  E-value=0.00012  Score=63.78  Aligned_cols=121  Identities=13%  Similarity=0.144  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc--
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF--   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al--   81 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|+++|++    .++++....++.... ....++.-..+..+++  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~   73 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-------RVVAVSRT----QADLDSLVRECPGIE-PVCVDLGDWEATERALGS   73 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHcCCCC-EEEEeCCCHHHHHHHHHH
Confidence            347899999999999999999999987       89999998    443432222211100 0000110001112223  


Q ss_pred             -CCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcCch
Q psy9582          82 -KDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGNPV  136 (329)
Q Consensus        82 -~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tNP~  136 (329)
                       ...|+||+.+|......   .+   ....+..|+.....+.+.+.+..   ...+.||++|-..
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~  138 (244)
T 3d3w_A           74 VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC  138 (244)
T ss_dssp             CCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             cCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchh
Confidence             35799999988653211   12   33456667666544444443321   1246777776543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.66  E-value=6.6e-05  Score=66.51  Aligned_cols=117  Identities=15%  Similarity=0.123  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~----   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.......   ..+++-..+.    
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   97 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGA-------RVVLTARD----VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFA   97 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHH
Confidence            47899999999999999999999987       89999998    555554444443221000   0011000111    


Q ss_pred             ---ccccCCccEEEEeCCCCCCCC----CC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPRKSN----ME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~~g----~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|+||+.+|.....+    .+   ....+..|+.....+    .+.+.+.  ..+.||++|-
T Consensus        98 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS  166 (262)
T 3rkr_A           98 TGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA--KRGHIINISS  166 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCCEEEEECS
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCceEEEEec
Confidence               112345899999998732111    22   334455666554444    4445443  4567777764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.66  E-value=4.8e-05  Score=68.61  Aligned_cols=120  Identities=12%  Similarity=-0.006  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC---ccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL---LVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~---~~~i~~~~~~~~a   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++... ....   ..+++-..+..++
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   94 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGA-------QCVIASRK----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNT   94 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHH
Confidence            46899999999999999999999987       89999998    44444333333321 1000   0011000111122


Q ss_pred             c-------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcCc
Q psy9582          81 F-------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGNP  135 (329)
Q Consensus        81 l-------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tNP  135 (329)
                      +       ...|+||+++|.....   ..+   ....+..|+.....+.+.+.+..   ...+.||++|--
T Consensus        95 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~  165 (302)
T 1w6u_A           95 VSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI  165 (302)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccc
Confidence            2       3459999998864321   122   33455667666555544443321   134677777643

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.66  E-value=4.8e-05  Score=68.81  Aligned_cols=168  Identities=14%  Similarity=0.063  Sum_probs=89.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      |||.|+||+|++|++++..|+..|.       +|+++|+..   ......    +.........++.-..+..++++  +
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   66 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL-------EVAVLDNLA---TGKREN----VPKGVPFFRVDLRDKEGVERAFREFR   66 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEECCCS---SCCGGG----SCTTCCEECCCTTCHHHHHHHHHHHC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-------EEEEEECCC---cCchhh----cccCeEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999887       899999852   111110    10000000011111112334555  7


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH-----HHHHHCCCCCCCcEE
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY-----ITMKSAPDLSYKNFT  156 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~-----~~~~~~~~~~~~~i~  156 (329)
                      .|+||++++.....  ..+....+..|+.....+++.+.+.. .. .+|++|-.......     ...+.. ..++....
T Consensus        67 ~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~-~iv~~SS~~~~~g~~~~~~~~~E~~-~~~~~~~Y  143 (311)
T 2p5y_A           67 PTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VE-KLVFASTGGAIYGEVPEGERAEETW-PPRPKSPY  143 (311)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CS-EEEEEEEHHHHHCCCCTTCCBCTTS-CCCCCSHH
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEeCCChhhcCCCCCCCCcCCCC-CCCCCChH
Confidence            99999998754311  12344567789999999999888753 33 45555432110000     000000 00111122


Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      +.+-....++...+++..+++..-++...++|..
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~  177 (311)
T 2p5y_A          144 AASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPR  177 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcC
Confidence            2233333444455566667776666655566753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.65  E-value=0.0001  Score=66.04  Aligned_cols=118  Identities=17%  Similarity=0.132  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........   .+++-..+..+. 
T Consensus        32 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  100 (276)
T 3r1i_A           32 GKRALITGASTGIGKKVALAYAEAGA-------QVAVAARH----SDALQVVADEIAGVGGKALPIRCDVTQPDQVRGML  100 (276)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESS----GGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            47899999999999999999999987       89999998    5555544444443211100   011101111222 


Q ss_pred             ------cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 ------FKDANIAILIGSFPRKSN---ME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                            +...|++|..+|......   .+   ....+..|+..    .+.+.+.+.+.. ..+.||+++-
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~~g~iv~isS  169 (276)
T 3r1i_A          101 DQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG-LGGTIITTAS  169 (276)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEECc
Confidence                  237899999998754221   22   33345566554    444455555542 3467777764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.65  E-value=8.5e-05  Score=64.36  Aligned_cols=117  Identities=16%  Similarity=0.091  Sum_probs=65.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC---
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD---   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~---   83 (329)
                      ++.|+||+|++|.+++..|+..|.       +|++.|++    .++++....++.........++.-..+..+.++.   
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   71 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-------ATYLTGRS----ESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS   71 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESC----HHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh
Confidence            599999999999999999999987       89999998    4545433322211000000011101111112222   


Q ss_pred             -ccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCC-CeEEEEEcC
Q psy9582          84 -ANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASR-DVKVLVVGN  134 (329)
Q Consensus        84 -aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p-~a~viv~tN  134 (329)
                       -|++|..+|......   .+   ....+..|+.....+.+.+.+.... ...||+++-
T Consensus        72 ~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS  130 (230)
T 3guy_A           72 IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMS  130 (230)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECC
T ss_pred             cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEee
Confidence             299999988653211   22   3345666776666655555443212 235666654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.65  E-value=0.00017  Score=64.42  Aligned_cols=120  Identities=17%  Similarity=0.129  Sum_probs=73.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|.+.   .++++....++........   .+++-..+..++ 
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~  100 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGA-------AVALTYVNA---AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAI  100 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999987       899998762   3334433334432210000   011000111122 


Q ss_pred             ------cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 ------FKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                            +...|++|..||......   .+   ....+..|+.....+.+.+.+...+.+.||+++-
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence                  237899999998753211   22   3455677877777777776665444567777754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.65  E-value=5e-05  Score=69.55  Aligned_cols=120  Identities=15%  Similarity=0.112  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-Cc----cceEeecCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LL----VDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~----~~i~~~~~~~~   79 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++...... ..    .+++-..+..+
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~-------~Vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~   76 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGC-------KVAIADIR----QDSIDKALATLEAEGSGPEVMGVQLDVASREGFKM   76 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHH
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHH
Confidence            46899999999999999999999987       89999998    55554444344321100 00    01100011111


Q ss_pred             c-------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHhhh----cCCCeEEEEEcCc
Q psy9582          80 A-------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQ----GKALNSV----ASRDVKVLVVGNP  135 (329)
Q Consensus        80 a-------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i----~~~i~~~----~~p~a~viv~tNP  135 (329)
                      +       +...|++|+.+|.... +  ..+   ....+..|+.....+    .+.+.+.    ....+.||++|--
T Consensus        77 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~  153 (319)
T 3ioy_A           77 AADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASM  153 (319)
T ss_dssp             HHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCG
T ss_pred             HHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccc
Confidence            2       2466999999986432 1  112   334556666554444    4444332    0135567777643

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.65  E-value=0.00038  Score=60.72  Aligned_cols=118  Identities=16%  Similarity=0.140  Sum_probs=69.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe----e--cC--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV----H--EN--   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~----~--~~--   76 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++    .++++.....+.....+...-+..    +  .+  
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~   82 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGA-------SVVLLGRT----EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYR   82 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEecC----HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHH
Confidence            46899999999999999999999987       89999998    555554444443321010000000    0  00  


Q ss_pred             -----cccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHH----HhhhcCCCeEEEEEcCc
Q psy9582          77 -----PITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKA----LNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 -----~~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~----i~~~~~p~a~viv~tNP  135 (329)
                           ..+.+...|++|+.+|...  .+  ..+   ....+..|+.....+.+.    +++.  ..+.||+++-.
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~~iv~isS~  155 (247)
T 3i1j_A           83 ELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS--EDASIAFTSSS  155 (247)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS--SSEEEEEECCG
T ss_pred             HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCeEEEEcch
Confidence                 1112347899999988632  21  112   334456666655544444    4442  45677777643

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.65  E-value=2.5e-05  Score=70.54  Aligned_cols=165  Identities=11%  Similarity=0.006  Sum_probs=90.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-   82 (329)
                      +||.|+||+|++|++++..|+..  +.       +|+++|++.    .... ..   .... ....++.-..+..++++ 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~----~~~~-~~---~~~~-~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTE-------NVIASDIRK----LNTD-VV---NSGP-FEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGG-------GEEEEESCC----CSCH-HH---HSSC-EEECCTTCHHHHHHHHHH
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCC-------EEEEEcCCC----cccc-cc---CCCc-eEEecCCCHHHHHHHHhh
Confidence            57999999999999999999987  66       899999872    2211 10   0000 00001111112334566 


Q ss_pred             -CccEEEEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH----HHHHHCCCCCCCcEE
Q psy9582          83 -DANIAILIGSFPRKS-NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY----ITMKSAPDLSYKNFT  156 (329)
Q Consensus        83 -~aDiVi~~~g~~~~~-g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~----~~~~~~~~~~~~~i~  156 (329)
                       ++|+||++++..... ..+....+..|+.....+++.+.+.. .. .+|.+|-....-..    ...+.. ...+....
T Consensus        67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~e~~-~~~~~~~Y  143 (312)
T 2yy7_A           67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IK-KIFWPSSIAVFGPTTPKENTPQYT-IMEPSTVY  143 (312)
T ss_dssp             TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CS-EEECCEEGGGCCTTSCSSSBCSSC-BCCCCSHH
T ss_pred             cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEeccHHHhCCCCCCCCccccC-cCCCCchh
Confidence             899999998764211 12345667889999999999988753 33 44444422110000    000000 01111122


Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEec
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGN  189 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~  189 (329)
                      +.+-....++...+++..+++..-++...++|.
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISW  176 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEECEEECEEECS
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecC
Confidence            233333334445555666777667775556774

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.65  E-value=0.00014  Score=65.10  Aligned_cols=120  Identities=12%  Similarity=0.077  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cC-CccceEeecCc----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FP-LLVDVSVHENP----   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~-~~~~i~~~~~~----   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.... .. ...+++-..+.    
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~   96 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-------RVFICARD----AEACADTATRLSAYGDCQAIPADLSSEAGARRLA   96 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHH
Confidence            346899999999999999999999987       89999998    444443333332210 00 00011000011    


Q ss_pred             ---ccccCCccEEEEeCCCCCCC---CC---CHHHHHHHHHHHH----HHHHHHHhhhcCC---CeEEEEEcCc
Q psy9582          78 ---ITAFKDANIAILIGSFPRKS---NM---ERSELLAINSSIF----IEQGKALNSVASR---DVKVLVVGNP  135 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~~---g~---~~~~~~~~n~~~~----~~i~~~i~~~~~p---~a~viv~tNP  135 (329)
                         .+.+...|++|..+|.....   ..   +....+..|+...    +.+.+.+++.. .   .+.||+++--
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~  169 (276)
T 2b4q_A           97 QALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSV  169 (276)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCG
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCH
Confidence               11234789999998864321   11   2334566666655    45555555542 2   1677777643

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.65  E-value=8.4e-05  Score=65.96  Aligned_cols=118  Identities=16%  Similarity=0.130  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--ccCCc---cceEeecCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--IFPLL---VDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--~~~~~---~~i~~~~~~~~   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++...  .....   .+++-..+..+
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   81 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAEGA-------KLSLVDVS----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEA   81 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHH
Confidence            46899999999999999999999987       89999998    44444333333221  00000   01100011111


Q ss_pred             c-------cCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 A-------FKDANIAILIGSFPRK--S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 a-------l~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +       +...|++|+.+|....  +  ..+   ....+..|+.    ..+.+.+.+++.  ..+.||+++-.
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  153 (267)
T 1iy8_A           82 YVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ--GSGMVVNTASV  153 (267)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCG
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEEcch
Confidence            2       2367999999986532  1  122   3344556664    445566666654  34567777643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.64  E-value=0.00013  Score=63.27  Aligned_cols=116  Identities=7%  Similarity=-0.040  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      ++|.|+||+|++|.+++..|++.|.       +|+++|++..  .+.+.....|+.+... . ...  .... +...+.|
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~D~~~~~~-~-~~~--~~~~-~~~~~~d   68 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGY-------RVVVLDLRRE--GEDLIYVEGDVTREED-V-RRA--VARA-QEEAPLF   68 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEESSCC--SSSSEEEECCTTCHHH-H-HHH--HHHH-HHHSCEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEccCcc--ccceEEEeCCCCCHHH-H-HHH--HHHH-HhhCCce
Confidence            5799999999999999999999887       8999999821  1111112223332110 0 000  0001 2233789


Q ss_pred             EEEEeCCCCCCCC------C----CHHHHHHHHHHHHHHHHHHHhhhcCC--------CeEEEEEcCc
Q psy9582          86 IAILIGSFPRKSN------M----ERSELLAINSSIFIEQGKALNSVASR--------DVKVLVVGNP  135 (329)
Q Consensus        86 iVi~~~g~~~~~g------~----~~~~~~~~n~~~~~~i~~~i~~~~~p--------~a~viv~tNP  135 (329)
                      ++|+++|......      .    .....+..|+.....+.+.+.+....        .+.||+++-.
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~  136 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV  136 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence            9999988643211      1    23445667777666666555443211        2367776643

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.64  E-value=3.3e-05  Score=68.10  Aligned_cols=115  Identities=7%  Similarity=0.037  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh--hHhhhhhcccCCccceE-eecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG--VIMEIEDCIFPLLVDVS-VHENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~--~~~dl~~~~~~~~~~i~-~~~~~~~al~   82 (329)
                      +++.|+||+|++|.+++..|++.|.       +|+++|++.    +.+..  ...|+.+..     .+. ......+.+.
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~d~~d~~-----~v~~~~~~~~~~~g   86 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSW-------NTISIDFRE----NPNADHSFTIKDSGEE-----EIKSVIEKINSKSI   86 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC----CTTSSEEEECSCSSHH-----HHHHHHHHHHTTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCc----ccccccceEEEeCCHH-----HHHHHHHHHHHHcC
Confidence            5799999999999999999999987       899999983    22221  112221110     000 0011223345


Q ss_pred             CccEEEEeCCCCCCC----CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          83 DANIAILIGSFPRKS----NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~----g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ..|++|+.+|.....    ..   .....+..|+.....+.+.+.+...+.+.||++|-..
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  147 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA  147 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence            679999998864321    11   2334566788887777777776643456777776543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.64  E-value=0.00012  Score=65.36  Aligned_cols=121  Identities=12%  Similarity=0.180  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP---   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~---   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.......   ..+++-..+.   
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-------RVFVCARG----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            346899999999999999999999987       89999998    444443333333211000   0011000011   


Q ss_pred             ----ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh--c--CCCeEEEEEcCc
Q psy9582          78 ----ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSV--A--SRDVKVLVVGNP  135 (329)
Q Consensus        78 ----~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~--~--~p~a~viv~tNP  135 (329)
                          .+.+...|++|..+|.....   ..+   ....+..|+.....+++.+.+.  .  ...+.||+++-.
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~  161 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAST  161 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCG
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcc
Confidence                12234789999999865321   122   3445667777766666665443  1  124677777643

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.64  E-value=0.00017  Score=64.77  Aligned_cols=119  Identities=11%  Similarity=0.108  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCcc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPI--   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~--   78 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........    .+++-..+..  
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  101 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGY-------SVVITGRR----PDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAAL  101 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHH
Confidence            36799999999999999999999987       89999998    4545444444432110000    0110001111  


Q ss_pred             -----cccCCccEEEEeCCCCCCC----CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 -----TAFKDANIAILIGSFPRKS----NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 -----~al~~aDiVi~~~g~~~~~----g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                           +.+..-|++|..+|.....    ..+   ....+..|+..    .+.+.+.+.+.....+.||+++-
T Consensus       102 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS  173 (281)
T 4dry_A          102 FAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS  173 (281)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence                 1234679999999864321    122   33455666654    55555666654212567777764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.63  E-value=0.0003  Score=62.23  Aligned_cols=117  Identities=15%  Similarity=0.224  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~----   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.......   ..+++-..+.    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGT-------AIALLDMN----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTV   75 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    444443333333211000   0011000011    


Q ss_pred             ---ccccCCccEEEEeCCCC-C-CC--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFP-R-KS--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~-~-~~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|++|+.+|.. . .+  ..+   ....+..|+.....+.    +.+.+.  ..+.||++|-
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS  144 (262)
T 1zem_A           76 DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ--NYGRIVNTAS  144 (262)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcc
Confidence               11234789999999864 2 11  122   2344556665544444    444443  3467777764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.63  E-value=7.5e-05  Score=67.20  Aligned_cols=118  Identities=12%  Similarity=0.032  Sum_probs=74.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc---cc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT---AF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~---al   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-..+..+   .+
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARRGA-------TVIMAVRD----TRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc
Confidence            47899999999999999999999987       89999998    444443322221000000001100011112   22


Q ss_pred             CCccEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          82 KDANIAILIGSFPRKS----NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~----g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ...|++|+.||.....    .......+..|+.....+.+.+.+.. .. .||++|-.
T Consensus        85 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~-riv~isS~  140 (291)
T 3rd5_A           85 SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TD-RVVTVSSM  140 (291)
T ss_dssp             CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EE-EEEEECCG
T ss_pred             CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-heeEeech
Confidence            4679999999864321    12344678889999888998888875 33 56666543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.62  E-value=4.9e-05  Score=68.84  Aligned_cols=122  Identities=13%  Similarity=0.140  Sum_probs=68.7

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecC--
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHEN--   76 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~--   76 (329)
                      ||. +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.....+ ..++. +..|  
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~-~~~~~~~~~Dv~   88 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGA-------QVTITGRN----EDRLEETKQQILKAGVP-AEKINAVVADVT   88 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCC-GGGEEEEECCTT
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCC-CceEEEEecCCC
Confidence            553 457899999999999999999999987       89999998    44444333333321100 00111 1111  


Q ss_pred             ----cccc-------cCCccEEEEeCCCCCC-C----CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582          77 ----PITA-------FKDANIAILIGSFPRK-S----NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGN  134 (329)
Q Consensus        77 ----~~~a-------l~~aDiVi~~~g~~~~-~----g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tN  134 (329)
                          ..++       +...|++|..+|.... +    ..+   ....+..|+.....+++.+.++.. ..+.||+++-
T Consensus        89 d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS  166 (297)
T 1xhl_A           89 EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSS  166 (297)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence                1112       2378999999886432 1    122   334556666655554444433210 1267777764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.62  E-value=0.00045  Score=60.72  Aligned_cols=118  Identities=14%  Similarity=0.111  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cce--EeecC--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDV--SVHEN--   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i--~~~~~--   76 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++........    .++  .-..+  
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGA-------TVILLGRN----EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ   80 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH
Confidence            36899999999999999999999987       89999998    5555544444432210000    011  00000  


Q ss_pred             -----cccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q psy9582          77 -----PITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 -----~~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tNP  135 (329)
                           ..+.+...|++|+.+|...  .+  ..+   ....+..|+.....+    .+.+.+.  ..+.||+++-.
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS~  153 (252)
T 3f1l_A           81 QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS--DAGSLVFTSSS  153 (252)
T ss_dssp             HHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS--SSCEEEEECCG
T ss_pred             HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC--CCCEEEEECCh
Confidence                 1122347899999998632  12  223   234456666654444    4444543  45677777643

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.62  E-value=6.6e-05  Score=66.95  Aligned_cols=103  Identities=17%  Similarity=0.154  Sum_probs=66.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
                      +||.|+||+|++|++++..|+..  |.       +|+.++++    ..+...    +....... ..++.-..+..++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~----~~~~~~----l~~~~~~~~~~D~~d~~~l~~~~~   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-------QIIAIVRN----VEKAST----LADQGVEVRHGDYNQPESLQKAFA   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-------GEEEEESC----TTTTHH----HHHTTCEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-------eEEEEEcC----HHHHhH----HhhcCCeEEEeccCCHHHHHHHHh
Confidence            47999999999999999999987  65       89999998    333321    11110000 011111123456788


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++|+||++++...  +  .    ..|+...+.+++.+.+.. .. .+|.+|
T Consensus        66 ~~d~vi~~a~~~~--~--~----~~n~~~~~~l~~a~~~~~-~~-~~v~~S  106 (287)
T 2jl1_A           66 GVSKLLFISGPHY--D--N----TLLIVQHANVVKAARDAG-VK-HIAYTG  106 (287)
T ss_dssp             TCSEEEECCCCCS--C--H----HHHHHHHHHHHHHHHHTT-CS-EEEEEE
T ss_pred             cCCEEEEcCCCCc--C--c----hHHHHHHHHHHHHHHHcC-CC-EEEEEC
Confidence            9999999987531  1  1    357888888888888753 34 444444

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.62  E-value=0.00063  Score=56.67  Aligned_cols=138  Identities=10%  Similarity=-0.000  Sum_probs=76.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA--   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a--   80 (329)
                      ..+|.|+|+ |.+|..++..|... |.       +|+++|.+    +++++.    +....... ..+..-...+.++  
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~-------~V~vid~~----~~~~~~----~~~~g~~~~~gd~~~~~~l~~~~~  102 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGK-------ISLGIEIR----EEAAQQ----HRSEGRNVISGDATDPDFWERILD  102 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCS-------CEEEEESC----HHHHHH----HHHTTCCEEECCTTCHHHHHTBCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCC-------eEEEEECC----HHHHHH----HHHCCCCEEEcCCCCHHHHHhccC
Confidence            358999998 99999999999987 87       89999998    444432    22111000 0000000112344  


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEech
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLR  160 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~  160 (329)
                      ++++|+||++.+..           ..|    ..++..+++.. |+..++..+|-.+.. ..+.+.  |.  +.++....
T Consensus       103 ~~~ad~vi~~~~~~-----------~~~----~~~~~~~~~~~-~~~~ii~~~~~~~~~-~~l~~~--G~--~~vi~p~~  161 (183)
T 3c85_A          103 TGHVKLVLLAMPHH-----------QGN----QTALEQLQRRN-YKGQIAAIAEYPDQL-EGLLES--GV--DAAFNIYS  161 (183)
T ss_dssp             CCCCCEEEECCSSH-----------HHH----HHHHHHHHHTT-CCSEEEEEESSHHHH-HHHHHH--TC--SEEEEHHH
T ss_pred             CCCCCEEEEeCCCh-----------HHH----HHHHHHHHHHC-CCCEEEEEECCHHHH-HHHHHc--CC--CEEEchHH
Confidence            78999999974321           122    23344556654 676766666533322 233333  33  34555444


Q ss_pred             hHHHHHHHHHHHHhCCCCC
Q psy9582         161 LDHNRAIAKLASKLNEPVS  179 (329)
Q Consensus       161 lds~r~~~~la~~l~~~~~  179 (329)
                      .-+.++...+.+.++.+-.
T Consensus       162 ~~a~~l~~~~~~~~~~~~~  180 (183)
T 3c85_A          162 EAGSGFARHVCKQLEPQFT  180 (183)
T ss_dssp             HHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHhcCCccc
Confidence            4344556666666665543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.61  E-value=0.00013  Score=64.37  Aligned_cols=118  Identities=13%  Similarity=0.090  Sum_probs=70.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~---   78 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.+......   .+++-..+..   
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   80 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGA-------SVVVTDLK----SEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVI   80 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTC-------EEEEEESS----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    5555544444433210000   0110001111   


Q ss_pred             ----cccCCccEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCc
Q psy9582          79 ----TAFKDANIAILIGSFPRKS--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP  135 (329)
                          +.+...|++|+.+|.....  ..+   ....+..|+.....+.    +.+.+.  ..+.||+++-.
T Consensus        81 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~  148 (256)
T 3gaf_A           81 KAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA--GGGAILNISSM  148 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCG
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcCH
Confidence                1233789999998864321  222   2334556665544444    444443  45677777643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.61  E-value=0.00017  Score=64.56  Aligned_cols=118  Identities=15%  Similarity=0.096  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC-------c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN-------P   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~-------~   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........+++-..+       .
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGC-------HVLCADID----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHH
Confidence            36799999999999999999999987       89999998    444443333331110000001100011       1


Q ss_pred             ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.+...|++|..+|.....   ..+   ....+..|+.....    +.+.+.+.  ..+.||+++-.
T Consensus        98 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~Iv~isS~  163 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER--GGGAIVNLSSL  163 (277)
T ss_dssp             HHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEECCG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcch
Confidence            12234789999998864321   122   33455667665444    44445443  45677777643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=97.61  E-value=0.00029  Score=64.34  Aligned_cols=115  Identities=12%  Similarity=0.093  Sum_probs=68.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC---ccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL---LVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~---~~~i~~~~~~~~al   81 (329)
                      |||.|+||+|++|++++..|+..|.       +|+++|+......+.+    ..+... ....   ..++.-..+..+++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   69 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVIILDNLCNSKRSVL----PVIERLGGKHPTFVEGDIRNEALMTEIL   69 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCCTTHH----HHHHHHHTSCCEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEecCCCcchhHH----HHHHhhcCCcceEEEccCCCHHHHHHHh
Confidence            4799999999999999999999887       8999987521111111    111110 0000   00110001122334


Q ss_pred             C--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 K--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +  +.|+||++|+.....  .....+.+..|+.....+++.+++.. .. .+|++|
T Consensus        70 ~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~iv~~S  123 (338)
T 1udb_A           70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VK-NFIFSS  123 (338)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CC-EEEEEE
T ss_pred             hccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CC-eEEEEc
Confidence            3  589999998864211  11334567889999999999888763 33 444444

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.61  E-value=7.2e-05  Score=67.10  Aligned_cols=125  Identities=12%  Similarity=0.146  Sum_probs=68.3

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeec
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHE   75 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~   75 (329)
                      ||.+  .+.+.|+||+|++|.+++..|++.|.       +|++.|++.   .+.++....++........   .+++-..
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~   92 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGF-------DIAITGIGD---AEGVAPVIAELSGLGARVIFLRADLADLS   92 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCC---HHHHHHHHHHHHHTTCCEEEEECCTTSGG
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCC-------eEEEEeCCC---HHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence            5543  46789999999999999999999987       899999741   3444433334432210000   0111011


Q ss_pred             Ccccc-------cCCccEEEEeCCCC--C-CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhc-CCCeEEEEEcCc
Q psy9582          76 NPITA-------FKDANIAILIGSFP--R-KS--NME---RSELLAINSSI----FIEQGKALNSVA-SRDVKVLVVGNP  135 (329)
Q Consensus        76 ~~~~a-------l~~aDiVi~~~g~~--~-~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~-~p~a~viv~tNP  135 (329)
                      +..++       +...|++|..||..  . .+  ..+   ....+..|+..    .+.+.+.+.+.. .+.+.||+++--
T Consensus        93 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~  172 (280)
T 4da9_A           93 SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSV  172 (280)
T ss_dssp             GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcch
Confidence            11122       23789999999873  1 11  122   22334455554    445555555532 115677777643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.60  E-value=0.00017  Score=64.36  Aligned_cols=117  Identities=12%  Similarity=0.185  Sum_probs=69.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~----   77 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........   .+++-..+.    
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   96 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGA-------MVIGTATT----EAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALV   96 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHH
Confidence            46788999999999999999999987       89999998    5555544444433210100   011000111    


Q ss_pred             ---ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|++|+.||.....   ..+   ....+..|+.....+.    +.+.+.  ..+.||+++-
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS  164 (270)
T 3ftp_A           97 ESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA--RGGRIVNITS  164 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEECc
Confidence               12234789999999865321   122   3345566766554444    444443  4567777764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.60  E-value=4.6e-05  Score=69.25  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=49.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      +||.|+||+|++|++++..|++.|.       +|++++++..   .+.. ...++....... ..++.-..++.++++++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~---~~~~-~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGH-------PTYVFTRPNS---SKTT-LLDEFQSLGAIIVKGELDEHEKLVELMKKV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC-------CEEEEECTTC---SCHH-HHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCC-------cEEEEECCCC---chhh-HHHHhhcCCCEEEEecCCCHHHHHHHHcCC
Confidence            4899999999999999999999886       7999999821   1211 111222111000 01111112356788999


Q ss_pred             cEEEEeCCC
Q psy9582          85 NIAILIGSF   93 (329)
Q Consensus        85 DiVi~~~g~   93 (329)
                      |+||++++.
T Consensus        81 d~vi~~a~~   89 (318)
T 2r6j_A           81 DVVISALAF   89 (318)
T ss_dssp             SEEEECCCG
T ss_pred             CEEEECCch
Confidence            999998764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.59  E-value=0.00012  Score=64.86  Aligned_cols=121  Identities=17%  Similarity=0.208  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCc---cceEeecCccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPIT   79 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~   79 (329)
                      +.+++.|+||+|++|.+++..|+..|.       +|++. +.+    .+.++....++........   .+++-..+..+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-------NVVLTYNGA----AEGAATAVAEIEKLGRSALAIKADLTNAAEVEA   75 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECSS----CHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCC----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            347899999999999999999999987       88888 444    3333333333332210100   01110011111


Q ss_pred             c-------cCCccEEEEeCCCC--CCC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 A-------FKDANIAILIGSFP--RKS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 a-------l~~aDiVi~~~g~~--~~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .       +...|++|+.+|..  ..+  ..+   ....+..|+.....+.+.+.+...+.+.||+++-.
T Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           76 AISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             HHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            2       23789999988754  222  122   34567788888888888877765335677777653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.58  E-value=0.00042  Score=62.42  Aligned_cols=120  Identities=13%  Similarity=0.080  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~----   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++.   ....+.....+........   .+++-..+.    
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  116 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGA-------NIAIAYLDE---EGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIV  116 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            36899999999999999999999987       899999982   1112211111211110000   011000011    


Q ss_pred             ---ccccCCccEEEEeCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPRKSN----ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~~~g----~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|++|+.+|.....+    .+   ....+..|+.....+.+.+.++....+.||+++-
T Consensus       117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS  183 (291)
T 3ijr_A          117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS  183 (291)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence               112346899999988643211    12   3456778888888888887776544567777764

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.58  E-value=0.00013  Score=64.02  Aligned_cols=115  Identities=15%  Similarity=0.078  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc-cchhhhHhhhhhcccCC---ccceEeecCcc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ-KAIKGVIMEIEDCIFPL---LVDVSVHENPI--   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~-~~~~~~~~dl~~~~~~~---~~~i~~~~~~~--   78 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    . ++++.   .+.......   ..+++-..+..  
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGA-------DIAIADLV----PAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAF   72 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----CCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCC----chhHHHH---HHHhcCCcEEEEEeecCCHHHHHHH
Confidence            46899999999999999999999987       89999998    3 33332   121111000   00110000111  


Q ss_pred             -----cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 -----TAFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 -----~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           +.+...|++|+.+|.....   ..+   ....+..|+..    .+.+.+.+++.  ..+.||+++-.
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  142 (249)
T 2ew8_A           73 GKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN--GWGRIINLTST  142 (249)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCeEEEEEcch
Confidence                 1235789999999865321   122   33455667665    44445556654  34677777643

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.58  E-value=5.9e-05  Score=66.45  Aligned_cols=117  Identities=14%  Similarity=0.097  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT-----   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~-----   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........++.-..+..+     
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGA-------KVAFSDIN----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            36899999999999999999999987       89999998    444443322221000000001100011111     


Q ss_pred             --ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 --AFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 --al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                        .+...|++|+.+|.....   ..+   ....+..|+.    ..+.+.+.+++.  . +.||+++-.
T Consensus        75 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~-g~iv~isS~  139 (253)
T 1hxh_A           75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--G-GSIINMASV  139 (253)
T ss_dssp             HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--C-EEEEEECCG
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc--C-CEEEEEcch
Confidence              233569999999865321   122   3345566755    445555566543  3 677777653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.58  E-value=8.7e-05  Score=66.31  Aligned_cols=118  Identities=16%  Similarity=0.104  Sum_probs=67.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cC-CccceEeec-------C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FP-LLVDVSVHE-------N   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~-~~~~i~~~~-------~   76 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.... .. ...++.-..       .
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   90 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-------SLVLTGRR----EERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDN   90 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHT
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            5799999999999999999999987       89999998    444443333332210 00 000110001       1


Q ss_pred             cccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 PITAFKDANIAILIGSFPRK--S--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ..+.+...|++|..+|....  +  ..+   ....+..|+..    ++.+.+.+.+.. ....||+++--
T Consensus        91 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~  159 (272)
T 2nwq_A           91 LPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSV  159 (272)
T ss_dssp             CCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCG
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCc
Confidence            11223456999999987432  2  122   33445666655    455555565542 23266666643

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.58  E-value=5.1e-05  Score=67.09  Aligned_cols=102  Identities=16%  Similarity=0.208  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD--   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~--   83 (329)
                      |||.|+||+|++|++++..|++ +.       +|++++++.    +...+...|+.+.           .+..+++++  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~-------~V~~~~r~~----~~~~~~~~Dl~~~-----------~~~~~~~~~~~   57 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH-------EVIKVYNSS----EIQGGYKLDLTDF-----------PRLEDFIIKKR   57 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS-------CEEEEESSS----CCTTCEECCTTSH-----------HHHHHHHHHHC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC-------eEEEecCCC----cCCCCceeccCCH-----------HHHHHHHHhcC
Confidence            3799999999999999999985 54       799999982    1101111222211           122344554  


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .|+||+++|.....  ..+....+..|+.....+++.+.+..   +.+|++|
T Consensus        58 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~iv~~S  106 (273)
T 2ggs_A           58 PDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID---SYIVHIS  106 (273)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT---CEEEEEE
T ss_pred             CCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC---CeEEEEe
Confidence            89999998864311  12455667889999999999988752   3555555

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.58  E-value=0.00054  Score=61.86  Aligned_cols=118  Identities=17%  Similarity=0.189  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE--ee--cC---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS--VH--EN---   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~--~~--~~---   76 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.........-+.  ++  .+   
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~  108 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-------NVAVAARS----PRELSSVTAELGELGAGNVIGVRLDVSDPGSCAD  108 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESS----GGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHH
Confidence            346899999999999999999999997       89999998    55555444455432100000000  10  01   


Q ss_pred             ----cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          77 ----PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ----~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                          ..+.+...|++|..+|.... +  ..+   ....+..|+.....+.    +.+.+.  ..+.||+++-
T Consensus       109 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iV~isS  178 (293)
T 3rih_A          109 AARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS--GRGRVILTSS  178 (293)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--SSCEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEeC
Confidence                11223467999999886432 1  122   3345566666554444    444554  2456666653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.58  E-value=0.00022  Score=62.65  Aligned_cols=116  Identities=15%  Similarity=0.168  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecCCcccccchhhhHhhhhhcccCCccceE-eecCc---
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHENP---   77 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~~---   77 (329)
                      .+.+++.|+||+|++|.+++..|++.|.       + |+++|++..  .+.++    ++.+.. + ..++. +..|.   
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~-------~~v~~~~r~~~--~~~~~----~l~~~~-~-~~~~~~~~~D~~~~   67 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNL-------KNFVILDRVEN--PTALA----ELKAIN-P-KVNITFHTYDVTVP   67 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCC-------SEEEEEESSCC--HHHHH----HHHHHC-T-TSEEEEEECCTTSC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-------cEEEEEecCch--HHHHH----HHHHhC-C-CceEEEEEEecCCC
Confidence            3457899999999999999999999886       5 899999821  11122    222110 0 00111 11111   


Q ss_pred             ----c-------cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcC-----CCeEEEEEcCc
Q psy9582          78 ----I-------TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS-----RDVKVLVVGNP  135 (329)
Q Consensus        78 ----~-------~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~-----p~a~viv~tNP  135 (329)
                          .       +.+.+.|++|+.+|...  .......+..|+.....+.+.+.+...     +.+.||++|-.
T Consensus        68 ~~~~~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~  139 (254)
T 1sby_A           68 VAESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             hHHHHHHHHHHHHhcCCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECch
Confidence                1       11237899999998642  234556677777766665555443321     14677777643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.57  E-value=7.2e-05  Score=66.73  Aligned_cols=119  Identities=13%  Similarity=0.051  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-ee------cC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VH------EN   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~------~~   76 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.... ....++. +.      .+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~   72 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-------KVTITGRH----AERLEETRQQILAAG-VSEQNVNSVVADVTTDAG   72 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTT-CCGGGEEEEECCTTSHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcc-cCCCceeEEecccCCHHH
Confidence            346899999999999999999999987       89999998    444443333331100 0000111 11      11


Q ss_pred             cccccC-------CccEEEEeCCCCCCC---CC----C---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582          77 PITAFK-------DANIAILIGSFPRKS---NM----E---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al~-------~aDiVi~~~g~~~~~---g~----~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tN  134 (329)
                      ..++++       +.|++|+.+|.....   ..    +   ....+..|+.....+.+.+.+... ..+.||++|-
T Consensus        73 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  148 (278)
T 1spx_A           73 QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISS  148 (278)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEec
Confidence            122233       789999998864311   11    2   223455666554444444333210 1256677664

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.57  E-value=0.00014  Score=63.69  Aligned_cols=116  Identities=10%  Similarity=0.112  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec---Ccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE---NPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~---~~~~a   80 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++... ++.... ....+++-..   ...+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~-~~~~~~-~~~~D~~~~~~~~~~~~~   71 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-------KVIATDIN----ESKLQELE-KYPGIQ-TRVLDVTKKKQIDQFANE   71 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHGGGG-GSTTEE-EEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHH-hccCce-EEEeeCCCHHHHHHHHHH
Confidence            347899999999999999999999987       89999998    44443222 221100 0000000000   11223


Q ss_pred             cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                      +...|++|+.+|.....   ..+   ....+..|+.....+    .+.+.+.  ..+.||+++-
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~g~iv~isS  133 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ--KSGNIINMSS  133 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCceEEEEec
Confidence            56789999999865321   122   233455666544444    4444443  3467777764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.57  E-value=0.00035  Score=62.57  Aligned_cols=118  Identities=20%  Similarity=0.191  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~--   79 (329)
                      .++|.|+||+|++|..++..|++.|.       +|++++++    .+.++....++.......   ..+++-..+..+  
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  112 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVS-------HVICISRT----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI  112 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS-------EEEEEESS----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHH
Confidence            36899999999999999999999886       89999887    444443333333211000   001100011111  


Q ss_pred             -----ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 -----AFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           .+.+.|+||..+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|-.
T Consensus       113 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~~iv~isS~  181 (285)
T 2c07_A          113 NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN--RYGRIINISSI  181 (285)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH--TCEEEEEECCT
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCEEEEECCh
Confidence                 234789999998865321   122   33455666666    44444444443  34677777654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.57  E-value=0.00013  Score=64.19  Aligned_cols=116  Identities=14%  Similarity=0.083  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~al   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+  +....++.......   ..+++-..+..+++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~----~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~   70 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA-------NIVLNGFG----DP--APALAEIARHGVKAVHHPADLSDVAQIEALF   70 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEECSS----CC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----ch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            36899999999999999999999987       89999998    22  11222222111000   00110001112223


Q ss_pred             -------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          82 -------KDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 -------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                             .+.|++|+.+|.....   ..+   ....+..|+.    ..+.+.+.+++.  ..+.||++|-.
T Consensus        71 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~g~iv~isS~  139 (255)
T 2q2v_A           71 ALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR--NWGRIINIASV  139 (255)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCG
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEEcCc
Confidence                   3789999999865321   112   3345666776    566666666664  34677777643

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.56  E-value=5.5e-05  Score=66.90  Aligned_cols=66  Identities=17%  Similarity=0.201  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||+|||+ |.+|..++..|...+.       +|.++|++    .++++.....+         .+..+.+..++++++
T Consensus         3 ~m~i~iiG~-G~mG~~~a~~l~~~g~-------~v~~~~~~----~~~~~~~~~~~---------g~~~~~~~~~~~~~~   61 (259)
T 2ahr_A            3 AMKIGIIGV-GKMASAIIKGLKQTPH-------ELIISGSS----LERSKEIAEQL---------ALPYAMSHQDLIDQV   61 (259)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTSSC-------EEEEECSS----HHHHHHHHHHH---------TCCBCSSHHHHHHTC
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCC-------eEEEECCC----HHHHHHHHHHc---------CCEeeCCHHHHHhcC
Confidence            468999998 9999999999988774       89999998    44444222111         122345566778899


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+||++.
T Consensus        62 D~Vi~~v   68 (259)
T 2ahr_A           62 DLVILGI   68 (259)
T ss_dssp             SEEEECS
T ss_pred             CEEEEEe
Confidence            9999984

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.56  E-value=6e-05  Score=69.41  Aligned_cols=97  Identities=20%  Similarity=0.134  Sum_probs=61.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccC--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK--   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~--   82 (329)
                      +||.|+||+|++|++++..|++.|.       +|++++++.....+++. ....+....... ..++.-..++.++++  
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHR-------PTYILARPGPRSPSKAK-IFKALEDKGAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTC-------CEEEEECSSCCCHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHHHHHT
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCC-------CEEEEECCCCCChhHHH-HHHHHHhCCcEEEEeecCCHHHHHHHHhhC
Confidence            6899999999999999999999885       89999998211112221 111222111000 011111223456778  


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      ++|+||++++..             |+...+.+++.+++..
T Consensus        83 ~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           83 EIDIVVSTVGGE-------------SILDQIALVKAMKAVG  110 (346)
T ss_dssp             TCCEEEECCCGG-------------GGGGHHHHHHHHHHHC
T ss_pred             CCCEEEECCchh-------------hHHHHHHHHHHHHHcC
Confidence            999999998752             5556677788887763

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.56  E-value=0.00014  Score=57.61  Aligned_cols=102  Identities=7%  Similarity=0.092  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc-cC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA-FK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a-l~   82 (329)
                      ..+|.|+|+ |.+|..++..|...|.       +|+++|.+    .++++.    +....... ..+..-...+.++ ++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~-------~v~~~d~~----~~~~~~----~~~~~~~~~~~d~~~~~~l~~~~~~   69 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGH-------EVLAVDIN----EEKVNA----YASYATHAVIANATEENELLSLGIR   69 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-------CCEEEESC----HHHHHT----TTTTCSEEEECCTTCHHHHHTTTGG
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH----HHHhCCEEEEeCCCCHHHHHhcCCC
Confidence            357999998 9999999999998886       79999998    433321    11111000 0000000111222 67


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      ++|+||++.+.+          ...|.    .++..+++.. ++.++...+||..
T Consensus        70 ~~d~vi~~~~~~----------~~~~~----~~~~~~~~~~-~~~ii~~~~~~~~  109 (144)
T 2hmt_A           70 NFEYVIVAIGAN----------IQAST----LTTLLLKELD-IPNIWVKAQNYYH  109 (144)
T ss_dssp             GCSEEEECCCSC----------HHHHH----HHHHHHHHTT-CSEEEEECCSHHH
T ss_pred             CCCEEEECCCCc----------hHHHH----HHHHHHHHcC-CCeEEEEeCCHHH
Confidence            899999986542          12232    2344455554 6645555566765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.56  E-value=5e-05  Score=67.74  Aligned_cols=118  Identities=11%  Similarity=0.083  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|+++|++    .+.++.....+.......   ..++.-..+..++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  101 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-------DVAIWYNS----HPADEKAEHLQKTYGVHSKAYKCNISDPKSVEET  101 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-------EEEEEESS----SCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHH
Confidence            346899999999999999999999887       89999998    333332222222111000   0011000111122


Q ss_pred             c-------CCccEEEEeCCCCCC--C---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 F-------KDANIAILIGSFPRK--S---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l-------~~aDiVi~~~g~~~~--~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +       ...|+||+.+|....  +   ..+   ....+..|+..    .+.+.+.+++.  ..+.||++|-
T Consensus       102 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~~iv~isS  172 (279)
T 3ctm_A          102 ISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN--GKGSLIITSS  172 (279)
T ss_dssp             HHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             HHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEECc
Confidence            2       348999999886432  1   111   22345566665    56677777664  2456666653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.56  E-value=0.00011  Score=63.97  Aligned_cols=115  Identities=21%  Similarity=0.226  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCccceEeecC------cc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN------PI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~------~~   78 (329)
                      ++|.|+||+|++|.+++..|++.|.       +|++. +++    .+.++....++....... .. .+..|      ..
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-------~v~~~~~r~----~~~~~~~~~~~~~~~~~~-~~-~~~~D~~~~~~~~   68 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-------ALAIHYGQN----REKAEEVAEEARRRGSPL-VA-VLGANLLEAEAAT   68 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEESSC----HHHHHHHHHHHHHTTCSC-EE-EEECCTTSHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC----HHHHHHHHHHHHhcCCce-EE-EEeccCCCHHHHH
Confidence            4799999999999999999999887       88887 776    343433333332211000 00 01111      11


Q ss_pred             c-------ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 T-------AFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ~-------al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +       .+.+.|+||+.+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|-.
T Consensus        69 ~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~~sS~  140 (245)
T 2ph3_A           69 ALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA--RFGRIVNITSV  140 (245)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCT
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc--CCCEEEEEeCh
Confidence            1       135789999999865321   112   33455667666    55666666654  34677777654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.55  E-value=0.00026  Score=62.92  Aligned_cols=122  Identities=14%  Similarity=0.094  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI   78 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~   78 (329)
                      .+.+++.|+||+|++|.+++..|++.|.       +|++. +++    .+.++....++.......   ..++.-..+..
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-------~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   92 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-------RVGVNYAAN----REAADAVVAAITESGGEAVAIPGDVGNAADIA   92 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence            3446799999999999999999999987       78776 444    344443333333211000   00110001111


Q ss_pred             -------cccCCccEEEEeCCCCCCCC----CC---HHHHHHHHHHHHHHHH----HHHhhhc-CCCeEEEEEcCc
Q psy9582          79 -------TAFKDANIAILIGSFPRKSN----ME---RSELLAINSSIFIEQG----KALNSVA-SRDVKVLVVGNP  135 (329)
Q Consensus        79 -------~al~~aDiVi~~~g~~~~~g----~~---~~~~~~~n~~~~~~i~----~~i~~~~-~p~a~viv~tNP  135 (329)
                             +.+...|+||..||....++    .+   ....+..|+.....+.    +.+.+.. ...+.||++|-.
T Consensus        93 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~  168 (272)
T 4e3z_A           93 AMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM  168 (272)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCT
T ss_pred             HHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcch
Confidence                   12236799999998754211    12   2344566665544444    4444321 135677777643

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.55  E-value=0.00016  Score=63.18  Aligned_cols=119  Identities=11%  Similarity=0.029  Sum_probs=68.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITA--   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~a--   80 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.... ..+ ..++.-..+..++  
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGA-------KVMITGRH----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHH
Confidence            46899999999999999999999987       89999998    443433222222110 000 0000000011112  


Q ss_pred             -----cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 -----FKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 -----l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           +...|+||+.+|.....   ..+   ....+..|+.    ..+.+.+.+.+.. ..+.||++|..
T Consensus        75 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  143 (251)
T 1zk4_A           75 ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSI  143 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCG
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCc
Confidence                 23589999998864321   122   3345667776    4444555555431 22677777654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.55  E-value=0.00013  Score=64.44  Aligned_cols=116  Identities=13%  Similarity=0.138  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA--   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a--   80 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++........   .++.-..+..+.  
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   83 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGA-------HVVVSSRK----QENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVA   83 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            6899999999999999999999987       89999998    4444433333332110000   011000111112  


Q ss_pred             -----cCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          81 -----FKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 -----l~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                           +.+.|++|+.+|....  +  ..+   ....+..|+.....+    .+.+++.  ..+.||++|-
T Consensus        84 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~g~iv~isS  151 (260)
T 2zat_A           84 MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR--GGGSVLIVSS  151 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEec
Confidence                 2378999999886421  1  122   334556676655444    4444443  3456777764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.55  E-value=0.00023  Score=64.25  Aligned_cols=121  Identities=14%  Similarity=0.128  Sum_probs=74.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEeecC-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVHEN-----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~~~-----   76 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++.  ..+.++.....+......   ...+++-..+     
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  119 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGA-------DVAINYLPA--EEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLV  119 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECCGG--GHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc--chhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999997       899999871  112222222222221100   0001100001     


Q ss_pred             --cccccCCccEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 --PITAFKDANIAILIGSFPRKS----NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~~----g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                        ..+.+...|++|+.+|.....    ..+   ....+..|+.....+.+.+.+...+.+.||+++-
T Consensus       120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS  186 (294)
T 3r3s_A          120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS  186 (294)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence              112235789999999864321    122   3456778888888888888777545567777764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.54  E-value=6.4e-05  Score=68.01  Aligned_cols=103  Identities=13%  Similarity=0.155  Sum_probs=67.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchh---hhHhhhhhcccCCccceEeecCccccc
Q psy9582           7 RISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIK---GVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~---~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      ||.|+||+|++|++++..|+..  +.       +|+++|++.    ....   -...|+.+           ..+..+++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~----~~~~~~~~~~~D~~d-----------~~~~~~~~   58 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK-------NVIASDIVQ----RDTGGIKFITLDVSN-----------RDEIDRAV   58 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG-------GEEEEESSC----CCCTTCCEEECCTTC-----------HHHHHHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC-------EEEEecCCC----ccccCceEEEecCCC-----------HHHHHHHH
Confidence            5899999999999999999987  65       799999872    2111   01112211           11233455


Q ss_pred             C--CccEEEEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 K--DANIAILIGSFPRKS-NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~--~aDiVi~~~g~~~~~-g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +  +.|+||++++..... ..+....+..|+.....+++.+.+.. .. .+|++|
T Consensus        59 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~-~~v~~S  111 (317)
T 3ajr_A           59 EKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VE-KVVIPS  111 (317)
T ss_dssp             HHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CC-EEEEEE
T ss_pred             hhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CC-EEEEec
Confidence            5  899999998764211 12345567889999999999988753 33 445544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.54  E-value=0.00051  Score=61.72  Aligned_cols=77  Identities=14%  Similarity=0.199  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecCc-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HENP-----   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~~-----   77 (329)
                      +.+++.|+||+|++|.+++..|+..|.       +|++.+++    .++++....++......   ++.. ..|.     
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~   76 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI-------MVVLTCRD----VTKGHEAVEKLKNSNHE---NVVFHQLDVTDPIA   76 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTTCC---SEEEEECCTTSCHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCC---ceEEEEccCCCcHH
Confidence            346899999999999999999999987       89999998    55555444455432111   1111 1111     


Q ss_pred             ---------ccccCCccEEEEeCCCC
Q psy9582          78 ---------ITAFKDANIAILIGSFP   94 (329)
Q Consensus        78 ---------~~al~~aDiVi~~~g~~   94 (329)
                               .+.+...|++|+.||..
T Consensus        77 ~v~~~~~~~~~~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           77 TMSSLADFIKTHFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCccc
Confidence                     11234789999999864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.53  E-value=0.00038  Score=60.29  Aligned_cols=103  Identities=20%  Similarity=0.130  Sum_probs=60.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~al   81 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.+++    .++++....++........    .+++-..+..+++
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   71 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGY-------ALALGARS----VDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFS   71 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHH
Confidence            5799999999999999999999987       89999998    5555544444431110000    0111111112223


Q ss_pred             -------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH
Q psy9582          82 -------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKAL  119 (329)
Q Consensus        82 -------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i  119 (329)
                             ...|++|+.+|.....   ..+   ....+..|+.....+.+.+
T Consensus        72 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  122 (235)
T 3l77_A           72 KKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF  122 (235)
T ss_dssp             C-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                   3789999999875321   122   3344556665544444433

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.53  E-value=0.00021  Score=63.11  Aligned_cols=118  Identities=14%  Similarity=0.114  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~--   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++........   .+++-..+..+  
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGA-------RVVITGRT----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    5555544444432210000   01100011111  


Q ss_pred             -----ccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          80 -----AFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                           .+...|++|+.+|.... +  ..+   ....+..|+.....+.    +.+.+.. ..+.||+++-
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~isS  143 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKG-IKGNIINMVA  143 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhC-CCcEEEEECc
Confidence                 22367999999886432 1  122   3345566666544444    4443332 4567777764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.52  E-value=0.00011  Score=64.74  Aligned_cols=118  Identities=17%  Similarity=0.184  Sum_probs=68.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA--   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a--   80 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.......   ..+++-..+..++  
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   71 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGF-------AVAIADYN----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVE   71 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            4799999999999999999999987       89999998    444443333333211000   0011000111122  


Q ss_pred             -----cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 -----FKDANIAILIGSFPRK-S--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 -----l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           +...|++|+.+|.... +  ..+   ....+..|+..    .+.+.+.+.+.. ..+.||+++--
T Consensus        72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~  140 (256)
T 1geg_A           72 QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG-HGGKIINACSQ  140 (256)
T ss_dssp             HHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCG
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCEEEEECch
Confidence                 2378999999886432 1  122   23345566654    444555555532 24677777643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.52  E-value=0.00069  Score=59.31  Aligned_cols=116  Identities=13%  Similarity=0.090  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~---   78 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++........   .+++-..+..   
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~   75 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGA-------AVAIAARR----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAV   75 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    4445444334432110000   0110000111   


Q ss_pred             ----cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHhhhcCCCeEEEEEcC
Q psy9582          79 ----TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGK----ALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~----~i~~~~~p~a~viv~tN  134 (329)
                          +.+...|++|+.+|.....   ..+   ....+..|+.....+.+    .+.+.  . +.||++|-
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~-g~iv~isS  142 (247)
T 2jah_A           76 ASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS--K-GTVVQMSS  142 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--C-CEEEEEcc
Confidence                1234789999998865321   122   23445667665555444    44432  2 57777764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.52  E-value=0.0013  Score=58.39  Aligned_cols=119  Identities=13%  Similarity=0.137  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~---   78 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.......   ..++.-..+..   
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   89 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGLGA-------RVYTCSRN----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLM   89 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    444443333333211000   00110000111   


Q ss_pred             ----ccc-CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCch
Q psy9582          79 ----TAF-KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        79 ----~al-~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP~  136 (329)
                          +.+ ...|++|+.+|.....   ..+   ....+..|+.....+.    +.+++.  ..+.||+++-..
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS~~  160 (273)
T 1ae1_A           90 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS--QNGNVIFLSSIA  160 (273)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSEEEEEECCGG
T ss_pred             HHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCHh
Confidence                122 5789999999864321   122   3344556665544444    444443  346777776543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.52  E-value=2.3e-05  Score=72.85  Aligned_cols=93  Identities=18%  Similarity=0.196  Sum_probs=63.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||.|+||+|++|++++..|++.|..      +|+.+|++.  +.+       +                 +.++++++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~------~v~~~d~~~--d~~-------~-----------------l~~~~~~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDH------HIFEVHRQT--KEE-------E-----------------LESALLKAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC------EEEECCTTC--CHH-------H-----------------HHHHHHHCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC------EEEEECCCC--CHH-------H-----------------HHHHhccCC
Confidence            58999999999999999999988763      789888830  010       1                 123445789


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++++.....  ...+....|+...+.+++.+++.. ....+|.+|
T Consensus        49 ~Vih~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~S   93 (369)
T 3st7_A           49 FIVHLAGVNRPE--HDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSS   93 (369)
T ss_dssp             EEEECCCSBCTT--CSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEE
T ss_pred             EEEECCcCCCCC--CHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeC
Confidence            999998764421  122234567788888888888864 443555554

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.52  E-value=6e-05  Score=67.95  Aligned_cols=85  Identities=16%  Similarity=0.153  Sum_probs=50.8

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc--ccchhhhHhhhhhcccCC-ccceEeecCcc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS--QKAIKGVIMEIEDCIFPL-LVDVSVHENPI   78 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~--~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~   78 (329)
                      |++++||.|+||+|++|++++..|++.|.       +|++++++....  .++.. ....+....... ..++.-..++.
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~~~~~-~~~~l~~~~v~~v~~D~~d~~~l~   72 (308)
T 1qyc_A            1 MGSRSRILLIGATGYIGRHVAKASLDLGH-------PTFLLVRESTASSNSEKAQ-LLESFKASGANIVHGSIDDHASLV   72 (308)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCCCCTTTTHHHHH-HHHHHHTTTCEEECCCTTCHHHHH
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCC-------CEEEEECCcccccCHHHHH-HHHHHHhCCCEEEEeccCCHHHHH
Confidence            44456899999999999999999999886       799999872110  11111 111121111000 01111112345


Q ss_pred             cccCCccEEEEeCCCC
Q psy9582          79 TAFKDANIAILIGSFP   94 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~   94 (329)
                      ++++++|+||++++..
T Consensus        73 ~~~~~~d~vi~~a~~~   88 (308)
T 1qyc_A           73 EAVKNVDVVISTVGSL   88 (308)
T ss_dssp             HHHHTCSEEEECCCGG
T ss_pred             HHHcCCCEEEECCcch
Confidence            6788999999987753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.51  E-value=0.0011  Score=58.40  Aligned_cols=120  Identities=16%  Similarity=0.080  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCCc--hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-Cc----cceEeecC
Q psy9582           4 KPVRISITGAAGQ--IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LL----VDVSVHEN   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~----~~i~~~~~   76 (329)
                      +.+++.|+||+|+  +|.+++..|++.|.       +|++.|++    .+..+ ...++...... ..    .+++-..+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~   73 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-------RLIFTYAG----ERLEK-SVHELAGTLDRNDSIILPCDVTNDAE   73 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-------EEEEEESS----GGGHH-HHHHHHHTSSSCCCEEEECCCSSSHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-------EEEEecCc----hHHHH-HHHHHHHhcCCCCceEEeCCCCCHHH
Confidence            3578999999977  99999999999987       89999987    32222 12222211100 00    01110011


Q ss_pred             ccc-------ccCCccEEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 PIT-------AFKDANIAILIGSFPRK-----S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 ~~~-------al~~aDiVi~~~g~~~~-----~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ..+       .+...|++|..+|....     +  ..+   ....+..|+.....+.+.+.++..+.+.||+++-.
T Consensus        74 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           74 IETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             HHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            111       12367999999886531     1  122   33456678887778888877765456777777643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.51  E-value=9.1e-05  Score=66.49  Aligned_cols=117  Identities=16%  Similarity=0.054  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~~~~~---   78 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++......   ...+++-..+..   
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   76 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGA-------KVVVTARN----GNALAELTDEIAGGGGEAAALAGDVGDEALHEALV   76 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEECCSC----HHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46789999999999999999999987       89999998    55555444444321100   001111111111   


Q ss_pred             ----cccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ----TAFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                          +.+...|++|..+|....  +  ..+   ....+..|+.....    ..+.+.+.  ..+.||+++-
T Consensus        77 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS  145 (280)
T 3tox_A           77 ELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL--GGGSLTFTSS  145 (280)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEcC
Confidence                123478999999986422  1  122   33445566654444    44445543  3567777664

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.51  E-value=9.4e-05  Score=66.16  Aligned_cols=119  Identities=14%  Similarity=0.106  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecC------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHEN------   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~------   76 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.... ....++. +..|      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~   72 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-------NVTITGRS----SERLEETRQIILKSG-VSEKQVNSVVADVTTEDG   72 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTT-CCGGGEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHcC-CCCcceEEEEecCCCHHH
Confidence            346899999999999999999999987       89999998    444443333332211 0000111 1111      


Q ss_pred             cccc-------cCCccEEEEeCCCCCC-C------CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582          77 PITA-------FKDANIAILIGSFPRK-S------NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGN  134 (329)
Q Consensus        77 ~~~a-------l~~aDiVi~~~g~~~~-~------g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tN  134 (329)
                      ..++       +...|++|+.+|.... +      ..+   ....+..|+.....+.+.+.++.. ..+.||+++-
T Consensus        73 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS  148 (280)
T 1xkq_A           73 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSS  148 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecC
Confidence            1112       2368999999986432 1      112   334456676655555444433210 1156777764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.51  E-value=0.00017  Score=64.20  Aligned_cols=119  Identities=17%  Similarity=0.146  Sum_probs=70.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec-CCcccccchhhhHhhhhhc-ccCC---ccceEee----cC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA-SNKKSQKAIKGVIMEIEDC-IFPL---LVDVSVH----EN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~~~~~~~~~dl~~~-~~~~---~~~i~~~----~~   76 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|+ +    .+.++....++... ....   ..+++-.    .+
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   80 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGF-------RVVVHYRHS----EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDC   80 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC----hHHHHHHHHHHHHhcCCceEEEeccCCCccccHHH
Confidence            5799999999999999999999987       8999999 6    44444333333221 1000   0011101    11


Q ss_pred             cccc-------cCCccEEEEeCCCCCCC---C--------------CCHHHHHHHHHHHHHHHHHHHhhhcC-CC-----
Q psy9582          77 PITA-------FKDANIAILIGSFPRKS---N--------------MERSELLAINSSIFIEQGKALNSVAS-RD-----  126 (329)
Q Consensus        77 ~~~a-------l~~aDiVi~~~g~~~~~---g--------------~~~~~~~~~n~~~~~~i~~~i~~~~~-p~-----  126 (329)
                      ..+.       +...|++|+.+|.....   .              ......+..|+.....+.+.+.++.. ..     
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  160 (276)
T 1mxh_A           81 CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSR  160 (276)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCC
Confidence            1111       23789999999864321   1              11234566787777777766665431 12     


Q ss_pred             -eEEEEEcCc
Q psy9582         127 -VKVLVVGNP  135 (329)
Q Consensus       127 -a~viv~tNP  135 (329)
                       +.||+++-.
T Consensus       161 ~g~iv~isS~  170 (276)
T 1mxh_A          161 NLSVVNLCDA  170 (276)
T ss_dssp             CEEEEEECCG
T ss_pred             CcEEEEECch
Confidence             677777654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.50  E-value=0.00018  Score=63.74  Aligned_cols=117  Identities=13%  Similarity=0.086  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------C
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------N   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~   76 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.+.....+.. .. ....+++-..       .
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~-~~-~~~~Dv~~~~~v~~~~~~   92 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-------RVIISYRT----EHASVTELRQAG-AV-ALYGDFSCETGIMAFIDL   92 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-------CEEEEESS----CCHHHHHHHHHT-CE-EEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHhcC-Ce-EEECCCCCHHHHHHHHHH
Confidence            346899999999999999999999987       89999998    333321111111 00 0000110000       1


Q ss_pred             cccccCCccEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCc
Q psy9582          77 PITAFKDANIAILIGSFPRKS--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP  135 (329)
                      ..+.+...|++|+.+|.....  ..+   ....+..|+.....+.    +.+.+.  ..+.||+++-.
T Consensus        93 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--~~g~iv~isS~  158 (260)
T 3gem_A           93 LKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS--EVADIVHISDD  158 (260)
T ss_dssp             HHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS--SSCEEEEECCG
T ss_pred             HHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcEEEEECCh
Confidence            122234789999999865322  122   2235566665544444    444442  34677777643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.50  E-value=0.00015  Score=64.71  Aligned_cols=117  Identities=13%  Similarity=0.139  Sum_probs=70.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~~~~~~--   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++......   ...+++-..+..+  
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   94 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVAGA-------RILINGTD----PSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAF   94 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEECCSC----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    55555444444332100   0011111111112  


Q ss_pred             -----ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          80 -----AFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                           .+...|++|..+|.....   ..+   ....+..|+.....    ..+.+.+.  ..+.||+++-
T Consensus        95 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iV~isS  162 (271)
T 4ibo_A           95 ARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR--GYGKIVNIGS  162 (271)
T ss_dssp             HHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcc
Confidence                 233789999999865321   122   33445666654444    45555553  3467777764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.50  E-value=0.00017  Score=64.52  Aligned_cols=120  Identities=13%  Similarity=0.138  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN-----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~-----   76 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++.   .+.++....++.......   ..++.-..+     
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   98 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGC-------KVIVNYANS---TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF   98 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---hHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999987       899999982   111222222232211000   001100001     


Q ss_pred             --cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 --PITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 --~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                        ..+.+...|++|+.+|.....   ..+   ....+..|+.....+++.+.++....+.||+++-
T Consensus        99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A           99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence              112234789999999865321   112   3455778888887777777766334567777764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.50  E-value=0.00011  Score=71.57  Aligned_cols=109  Identities=13%  Similarity=0.099  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-----cCCccceEe-ecCc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-----FPLLVDVSV-HENP   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-----~~~~~~i~~-~~~~   77 (329)
                      .+++|.|+||+|++|++++..|...+.       +|++++++... ..........+....     .....++.+ ..|+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl  220 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH-------RIYCFIRADNE-EIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDF  220 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE-------EEEEEEESSSH-HHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBT
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC-------EEEEEECCCCh-HHHHHHHHHHHHHhcccccchhccCceEEEecCC
Confidence            457999999999999999999976665       89999998311 001111111111100     000011211 1121


Q ss_pred             cc-----ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy9582          78 IT-----AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS  121 (329)
Q Consensus        78 ~~-----al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~  121 (329)
                      .+     +..++|+||++++... ...+...+...|+...+++++.+.+
T Consensus       221 ~d~~~l~~~~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~  268 (508)
T 4f6l_B          221 ECMDDVVLPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ  268 (508)
T ss_dssp             TBCSSCCCSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT
T ss_pred             cccccCCCccCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh
Confidence            11     5679999999987643 1223344567899999999998887

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.50  E-value=0.0003  Score=62.86  Aligned_cols=123  Identities=15%  Similarity=0.108  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCc---------ccccchhhhHhhhhhcccCCc---cceE
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNK---------KSQKAIKGVIMEIEDCIFPLL---VDVS   72 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~---------~~~~~~~~~~~dl~~~~~~~~---~~i~   72 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.|++..         ...+.++.....+........   .+++
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGA-------DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            46899999999999999999999997       8999998410         013333333333332110000   0110


Q ss_pred             eecCcc-------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          73 VHENPI-------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        73 ~~~~~~-------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      -..+..       +.+...|++|+.+|.....   ..+   ....+..|+..    .+.+.+.+.+.. ..+.||++|-.
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~  166 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG-NGGSIVVVSSS  166 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-SCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEEcch
Confidence            001111       1234789999999875321   122   33445566654    444455555542 46777777643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.49  E-value=0.00027  Score=62.02  Aligned_cols=117  Identities=14%  Similarity=0.207  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~~~~al~   82 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++.............|+.+..     .+. ......+.+.
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~D~~d~~-----~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-------KVTGFDQAFTQEQYPFATEVMDVADAA-----QVAQVCQRLLAETE   73 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCCCSSCCSSEEEECCTTCHH-----HHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCchhhhcCCceEEEcCCCCHH-----HHHHHHHHHHHHcC
Confidence            457899999999999999999999987       899999982100000011112222210     000 0001112234


Q ss_pred             CccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                      ..|++|+.+|.... +  ..+   ....+..|+.....+    .+.+++.  ..+.||+++-
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS  133 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ--RGGAIVTVAS  133 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc--CCCEEEEECc
Confidence            78999999986432 1  122   334556666554444    4444553  3456667664

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.49  E-value=0.00054  Score=61.43  Aligned_cols=124  Identities=16%  Similarity=0.135  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc---chhhhHhhhhhcccCC---ccceEeecCc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK---AIKGVIMEIEDCIFPL---LVDVSVHENP   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~---~~~~~~~dl~~~~~~~---~~~i~~~~~~   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++..+.++   .++....++.......   ..+++-..+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-------NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-------EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            457899999999999999999999987       89999998321111   1222222332211000   0011000111


Q ss_pred             -------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcC--CCeEEEEEcC
Q psy9582          78 -------ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVAS--RDVKVLVVGN  134 (329)
Q Consensus        78 -------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~--p~a~viv~tN  134 (329)
                             .+.+...|++|+.||.....   ..+   ....+..|+.....+.+.+.+...  ..+.||++|-
T Consensus        81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  152 (285)
T 3sc4_A           81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP  152 (285)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence                   12234789999999865321   122   334566788777777776655431  3457777764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.49  E-value=0.00015  Score=63.39  Aligned_cols=118  Identities=14%  Similarity=0.107  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +.+++.|+||+|++|.+++..|++ .+.       .|.+.|+++....+.+.....|+.+...  ...+   .+..+ ..
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-------~v~~~~~~~~~~~~~~~~~~~Dv~~~~~--v~~~---~~~~~-~~   69 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-------TVINIDIQQSFSAENLKFIKADLTKQQD--ITNV---LDIIK-NV   69 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-------EEEEEESSCCCCCTTEEEEECCTTCHHH--HHHH---HHHTT-TC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-------EEEEeccccccccccceEEecCcCCHHH--HHHH---HHHHH-hC
Confidence            346799999999999999999998 665       8999998832111222222334433210  0000   00011 23


Q ss_pred             CccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          83 DANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..|++|+.+|.....   ..+   ....+..|+.....+.+.+.+...+.+.||+++-
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS  127 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGS  127 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECC
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECC
Confidence            789999999874321   222   3455678888888888877766433456777654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.49  E-value=0.00012  Score=65.61  Aligned_cols=38  Identities=24%  Similarity=0.256  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |.-+.+++.|+||+|++|.+++..|++.|.       +|++.|++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~   38 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGA-------RVAVLDKS   38 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCC
Confidence            434567899999999999999999999987       89999998

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.49  E-value=0.00021  Score=63.74  Aligned_cols=42  Identities=17%  Similarity=0.260  Sum_probs=35.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI   57 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~   57 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++...
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~-------~Vi~~~r~----~~~~~~~~   71 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGL-------GVVIADLA----AEKGKALA   71 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHH
Confidence            36789999999999999999999987       89999998    44454433

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.48  E-value=0.00037  Score=61.81  Aligned_cols=119  Identities=17%  Similarity=0.180  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC---ccceEeecC----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL---LVDVSVHEN----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~---~~~i~~~~~----   76 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.|++    .+.++....++... ....   ..+++-..+    
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~   88 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAAGA-------RLVLSGRD----VSELDAARRALGEQFGTDVHTVAIDLAEPDAPAEL   88 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            46899999999999999999999987       89999998    55555444444321 1000   001100011    


Q ss_pred             ---cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 ---PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 ---~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                         ..+.+...|++|+.+|......   .+   ....+..|+..    .+.+.+.+.+.. ..+.||+++--
T Consensus        89 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~  159 (266)
T 4egf_A           89 ARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG-EGGAIITVASA  159 (266)
T ss_dssp             HHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCG
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEEcch
Confidence               1122347899999998754211   22   33445566554    444555555542 45677777643

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.48  E-value=0.00011  Score=74.07  Aligned_cols=114  Identities=13%  Similarity=0.174  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecC-cccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHEN-PITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~-~~~a   80 (329)
                      +.++|.|+||+|++|++++..|+.. +.       +|+++|++    ...+....   ....... ..++.-..+ ..++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~-------~V~~~~r~----~~~~~~~~---~~~~v~~v~~Dl~d~~~~~~~~  379 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHY-------EVYGLDIG----SDAISRFL---NHPHFHFVEGDISIHSEWIEYH  379 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSE-------EEEEEESC----CTTTGGGT---TCTTEEEEECCTTTCHHHHHHH
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCC-------EEEEEEcC----chhhhhhc---cCCceEEEECCCCCcHHHHHHh
Confidence            4578999999999999999999987 66       89999998    32222110   0000000 001100001 2335


Q ss_pred             cCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++++|+||++|+.....  ..+..+.+..|+.....+++.+.+..   ..+|++|-
T Consensus       380 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS  432 (660)
T 1z7e_A          380 VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPST  432 (660)
T ss_dssp             HHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECC
T ss_pred             hcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEec
Confidence            67899999998864321  12344567788889999999988752   46666654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.48  E-value=0.0019  Score=56.70  Aligned_cols=119  Identities=14%  Similarity=0.122  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC------c
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN------P   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~------~   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........-..+..|      .
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   74 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-------RVVLIARS----KQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKA   74 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-------EEEEEESC----HHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHhccccCcceEEeccCCCHHHH
Confidence            346899999999999999999999987       89999998    555554444443221000000011111      1


Q ss_pred             -------ccccCCccEEEEeCCCCCCC--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 -------ITAFKDANIAILIGSFPRKS--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 -------~~al~~aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                             .+.+...|++|..||.....  ..+   ....+..|+..    ++.+.+.+++.  ..+.||+++-.
T Consensus        75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~  146 (250)
T 3nyw_A           75 DTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ--KNGYIFNVASR  146 (250)
T ss_dssp             HHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC-
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEEccH
Confidence                   11234689999999874321  122   23445556554    44444555553  45677777653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.48  E-value=0.00028  Score=62.21  Aligned_cols=113  Identities=14%  Similarity=0.154  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh---hHhhhhhcccCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.+++    .++++.   ...|+.+... . ..  ......+.+
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~Dl~d~~~-v-~~--~~~~~~~~~   85 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGD-------KVAITYRS----GEPPEGFLAVKCDITDTEQ-V-EQ--AYKEIEETH   85 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----SCCCTTSEEEECCTTSHHH-H-HH--HHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----hHhhccceEEEecCCCHHH-H-HH--HHHHHHHHc
Confidence            36899999999999999999999987       89999998    333321   1223332110 0 00  001112234


Q ss_pred             CCccEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRK------SNMERSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~------~g~~~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                      ...|++|..+|....      ...+....+..|+.....+.    +.+.+.  ..+.||+++-
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~g~iv~isS  146 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA--KKGRVVLISS  146 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEECc
Confidence            567999999886432      12234556677776555544    444443  3466777653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.48  E-value=0.00023  Score=63.80  Aligned_cols=102  Identities=17%  Similarity=0.131  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD-   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~-   83 (329)
                      ++||.|+||+|++|++++..|++.|....   .+..-  .         .....|+.+.           ....+++++ 
T Consensus         6 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~---~~~~~--~---------~~~~~D~~d~-----------~~~~~~~~~~   60 (319)
T 4b8w_A            6 SMRILVTGGSGLVGKAIQKVVADGAGLPG---EDWVF--V---------SSKDADLTDT-----------AQTRALFEKV   60 (319)
T ss_dssp             CCEEEEETCSSHHHHHHHHHHHTTTCCTT---CEEEE--C---------CTTTCCTTSH-----------HHHHHHHHHS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhcCCccc---ccccc--c---------CceecccCCH-----------HHHHHHHhhc
Confidence            47999999999999999999998875110   01111  1         1112233321           112344444 


Q ss_pred             -ccEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 -ANIAILIGSFPRK---SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 -aDiVi~~~g~~~~---~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                       +|+||++++....   ......+.+..|+...+.+++.+.+.. .. .+|.+|
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~-~~v~~S  112 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-AR-KVVSCL  112 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CS-EEEEEC
T ss_pred             CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEc
Confidence             8999999886431   123455678899999999999998864 44 455544

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.47  E-value=0.00013  Score=63.56  Aligned_cols=119  Identities=18%  Similarity=0.190  Sum_probs=66.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA-   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a-   80 (329)
                      ++|.|+||+|++|.+++..|++.|.       +|++. +++    .+.++....++.......   ..+++-..+..++ 
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~-------~v~~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   70 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGC-------KVLVNYARS----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMM   70 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC----HHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHH
Confidence            5799999999999999999999987       78884 666    333433333332211000   0011000111122 


Q ss_pred             ------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          81 ------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        81 ------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                            +.+.|+||+.+|.....   ..+   ....+..|+.....+.+.+.++.  ...+.||++|-.
T Consensus        71 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  139 (244)
T 1edo_A           71 KTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECCh
Confidence                  23789999999875421   112   33455667666555444443321  134677777654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.47  E-value=0.00019  Score=58.29  Aligned_cols=33  Identities=18%  Similarity=0.248  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|+|+|+ |.+|..++..|...|.       +|+++|++
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~-------~V~vid~~   51 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGH-------SVVVVDKN   51 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC
Confidence            479999998 9999999999998886       89999998

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.46  E-value=0.0018  Score=57.29  Aligned_cols=119  Identities=14%  Similarity=0.101  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEeecC---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVHEN---   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~~~---   76 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.|++    .++++....++....... .    .+++-..+   
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   76 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGA-------AVAFCARD----GERLRAAESALRQRFPGARLFASVCDVLDALQVRA   76 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHH
Confidence            46899999999999999999999987       89999998    555554444443311000 0    01100001   


Q ss_pred             ----cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582          77 ----PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN  134 (329)
Q Consensus        77 ----~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN  134 (329)
                          ..+.+...|++|+.+|.... +  ..+   ....+..|+.....+++.+.++.  ...+.||+++-
T Consensus        77 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS  146 (265)
T 3lf2_A           77 FAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNS  146 (265)
T ss_dssp             HHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEE
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECC
Confidence                11223467999999986432 1  222   33456677766555555443322  13566777653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.46  E-value=0.00019  Score=64.32  Aligned_cols=151  Identities=14%  Similarity=0.102  Sum_probs=91.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------ENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~~   78 (329)
                      +.+.|+||++.+|.++|..|++.|.       .|++.|++    .++++..+.++......+..+++-.       ....
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga-------~V~i~~r~----~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGA-------RVFITGRR----KDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHH
Confidence            5677889999999999999999998       89999999    6666655555532111110011100       1122


Q ss_pred             cccCCccEEEEeCCCCC-CC--CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHHHHH
Q psy9582          79 TAFKDANIAILIGSFPR-KS--NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV------NTNTYITMKS  146 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~-~~--g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~~~~  146 (329)
                      +.+..-|++|..||... .+  ..   ++...+..|+.-.-.+++...++-...+.||+++--.      +...|.++|.
T Consensus        99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKa  178 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKA  178 (273)
T ss_dssp             HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHH
Confidence            34557899999888643 22  12   2455677788777777766666554456677765322      1223333332


Q ss_pred             CCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         147 APDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       147 ~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .               -..+.+.+|..++  |..|+.-
T Consensus       179 a---------------v~~ltr~lA~Ela--~~gIrVN  199 (273)
T 4fgs_A          179 A---------------LRSFARNWILDLK--DRGIRIN  199 (273)
T ss_dssp             H---------------HHHHHHHHHHHTT--TSCEEEE
T ss_pred             H---------------HHHHHHHHHHHhc--ccCeEEE
Confidence            1               1346677788776  6677754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.46  E-value=0.00024  Score=63.10  Aligned_cols=118  Identities=13%  Similarity=0.141  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh-hhcccCC---ccceEeecCccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI-EDCIFPL---LVDVSVHENPIT-   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl-~~~~~~~---~~~i~~~~~~~~-   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++ .......   ..+++-..+..+ 
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGC-------SVVVASRN----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            36899999999999999999999987       89999998    44444333333 1111000   001100011111 


Q ss_pred             ------ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHhhhcCCCeEEEEEcCc
Q psy9582          80 ------AFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGK----ALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 ------al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~----~i~~~~~p~a~viv~tNP  135 (329)
                            .+...|++|+.+|.....   ..+   ....+..|+.....+++    .+.+.  ..+.||+++--
T Consensus        90 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~g~iv~isS~  159 (267)
T 1vl8_A           90 LEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES--DNPSIINIGSL  159 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC--SSCEEEEECCG
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEECCc
Confidence                  233789999999875421   122   23455667665555544    44442  34566776543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.46  E-value=0.00025  Score=64.09  Aligned_cols=118  Identities=14%  Similarity=0.108  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc-
Q psy9582           5 PVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI-   78 (329)
Q Consensus         5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~-   78 (329)
                      .+++.|+||+|  ++|.+++..|++.|.       +|++.|++    .+..+. ..++.......   ..+++-..+.. 
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~-------~V~~~~r~----~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~   97 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGA-------EVALTYLS----ETFKKR-VDPLAESLGVKLTVPCDVSDAESVDN   97 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTC-------EEEEEESS----GGGHHH-HHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHH-HHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence            46899999976  999999999999987       89999998    322221 11111110000   00110001111 


Q ss_pred             ------cccCCccEEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ------TAFKDANIAILIGSFPRK-----S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ------~al~~aDiVi~~~g~~~~-----~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                            +.+...|++|..+|....     +  ..+   ....+..|+.....+++.+.++....+.||+++-
T Consensus        98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS  169 (296)
T 3k31_A           98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY  169 (296)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence                  123467999999987531     1  122   3456677888888888888776544577777764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.46  E-value=0.00015  Score=64.66  Aligned_cols=118  Identities=14%  Similarity=0.158  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++.... ....++.-..+.       
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~   76 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGA-------RVVICDKD----ESGGRALEQELPGAV-FILCDVTQEDDVKTLVSET   76 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcCCe-EEEcCCCCHHHHHHHHHHH
Confidence            36899999999999999999999987       89999998    444433222221110 000000000111       


Q ss_pred             ccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582          78 ITAFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN  134 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN  134 (329)
                      .+.+...|++|+.+|....  +  ..+   ....+..|+.....+++.+.++. ...+.||+++-
T Consensus        77 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  141 (270)
T 1yde_A           77 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  141 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence            1123478999999886432  1  122   33455667665555554443321 01356677664

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.46  E-value=0.00014  Score=66.67  Aligned_cols=125  Identities=15%  Similarity=0.073  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC-cccccchhhhHhhhhhcccCC---ccceEeecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN-KKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN   76 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~   76 (329)
                      |+.+.+++.|+||+|++|.+++..|++.|.       +|++.+++. +...++++.....+.......   ..+++-..+
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~-------~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~   73 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGH-------RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVS   73 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHH
Confidence            444557899999999999999999999987       898887751 111222222221121111000   001111111


Q ss_pred             ccccc-------CCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHH----HhhhcCCCeEEEEEcC
Q psy9582          77 PITAF-------KDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKA----LNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ~~~al-------~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~----i~~~~~p~a~viv~tN  134 (329)
                      ..+++       ...|++|..||.... +  ..+   ....+..|+.....+.+.    +++.  ..+.||++|-
T Consensus        74 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~--~~g~iV~isS  146 (324)
T 3u9l_A           74 VDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ--KHGLLIWISS  146 (324)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEec
Confidence            12223       388999999986431 1  112   334566676655555444    4554  3566777664

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.45  E-value=0.00039  Score=61.02  Aligned_cols=120  Identities=11%  Similarity=0.083  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP---   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~---   77 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|++.+...   .++......++........   .+++-..+.   
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGF-------RVVAGCGPN---SPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQA   81 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTE-------EEEEEECTT---CSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHH
Confidence            457899999999999999999999987       899888431   3333333333332211110   011000111   


Q ss_pred             ----ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ----ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ----~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                          .+.+...|++|+.+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|-.
T Consensus        82 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~  151 (256)
T 3ezl_A           82 FDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER--GWGRIINISSV  151 (256)
T ss_dssp             HHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCC
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcch
Confidence                12234789999998865421   122   23455666665    45555556654  34677777653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.45  E-value=0.00047  Score=60.56  Aligned_cols=34  Identities=21%  Similarity=0.233  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~   47 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGA-------NVAVIYRS   47 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCc
Confidence            36899999999999999999999987       89999997

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.45  E-value=9.8e-05  Score=64.94  Aligned_cols=117  Identities=12%  Similarity=0.131  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------ENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~~   78 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .++++....++.........+++-.       ....
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   69 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRR----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLP   69 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3689999999999999999999987       89999998    4444433222211000000011000       0111


Q ss_pred             cccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 TAFKDANIAILIGSFPR--KS--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +.+...|++|+.+|...  .+  ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|-.
T Consensus        70 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~g~iv~isS~  135 (248)
T 3asu_A           70 AEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER--NHGHIINIGST  135 (248)
T ss_dssp             TTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCG
T ss_pred             HhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEccc
Confidence            22347899999998652  11  122   33455666554    44445555443  34567777643

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.44  E-value=0.00024  Score=62.58  Aligned_cols=118  Identities=14%  Similarity=0.160  Sum_probs=67.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccc--hhhhHhhhhhcccCCc---cceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKA--IKGVIMEIEDCIFPLL---VDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~--~~~~~~dl~~~~~~~~---~~i~~~~~~~~a   80 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .+.  ++....++........   .+++-..+..++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   71 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGF-------DIAVADLP----QQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSA   71 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEECG----GGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----cchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            5799999999999999999999987       89999998    333  3333333322110000   011000111112


Q ss_pred             -------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 -------FKDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 -------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                             +...|++|+.+|.....   ..+   ....+..|+...    +.+.+.+.+.. ..+.||+++-.
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~  142 (258)
T 3a28_C           72 IDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASI  142 (258)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCG
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcc
Confidence                   23789999998865321   122   334556666544    44445554432 32567777643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.44  E-value=0.00079  Score=59.44  Aligned_cols=119  Identities=13%  Similarity=0.099  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCC-chHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCcc
Q psy9582           4 KPVRISITGAAG-QIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G-~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~   78 (329)
                      +.+++.|+||+| .+|.+++..|++.|.       +|++.|++    .++++....++........    .+++-..+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~   89 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-------DVVISDYH----ERRLGETRDQLADLGLGRVEAVVCDVTSTEAVD   89 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-------EEEEecCC----HHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHH
Confidence            357899999987 699999999999987       89999998    5555444444432210000    0110001111


Q ss_pred             cc-------cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          79 TA-------FKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ~a-------l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                      +.       +..-|++|+.+|......   .+   ....+..|+.....    +.+.+.+.. ..+.|++++-
T Consensus        90 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS  161 (266)
T 3o38_A           90 ALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD-HGGVIVNNAS  161 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-CCEEEEEECC
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeCC
Confidence            12       236699999998643211   22   23345556554444    444454432 4567777764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.43  E-value=0.00032  Score=62.53  Aligned_cols=123  Identities=15%  Similarity=0.192  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCc---------ccccchhhhHhhhhhcccCCc---cceE
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNK---------KSQKAIKGVIMEIEDCIFPLL---VDVS   72 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~---------~~~~~~~~~~~dl~~~~~~~~---~~i~   72 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|+++|++..         ...+.++.....+........   .+++
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   83 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGA-------DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR   83 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCC-------EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence            46899999999999999999999997       8999998410         012333322223322110000   0010


Q ss_pred             eecC-------cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          73 VHEN-------PITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        73 ~~~~-------~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      -..+       ..+.+...|++|+.+|.....   ..+   ....+..|+.    .++.+.+.+.+.. +.+.||++|--
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~  162 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG-RGGSIILISSA  162 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCCEEEEEccH
Confidence            0001       112234689999999875422   122   2344556655    4445555566642 46778887643

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.43  E-value=0.003  Score=55.67  Aligned_cols=156  Identities=15%  Similarity=0.095  Sum_probs=88.5

Q ss_pred             CCC-CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCcc--ceEee-
Q psy9582           1 MLK-KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLV--DVSVH-   74 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~--~i~~~-   74 (329)
                      ||+ +.+.+.|+||+|  .+|.++|..|++.|.       +|++.|++    ++.++.....+.+...+...  ...++ 
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-------~Vvi~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   69 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGA-------KLVFTYRK----ERSRKELEKLLEQLNQPEAHLYQIDVQS   69 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-------EEEEEESS----GGGHHHHHHHHGGGTCSSCEEEECCTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCcEEEEEccCCC
Confidence            665 457788999876  799999999999997       89999998    44444333333332111000  00111 


Q ss_pred             --------cCcccccCCccEEEEeCCCCCC-----C--CCCHHHH---HHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          75 --------ENPITAFKDANIAILIGSFPRK-----S--NMERSEL---LAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        75 --------~~~~~al~~aDiVi~~~g~~~~-----~--g~~~~~~---~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                              ....+.+...|++|..+|....     +  ..+.+++   +..|.......++....+....+.||+++--.
T Consensus        70 ~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~  149 (256)
T 4fs3_A           70 DEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLG  149 (256)
T ss_dssp             HHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence                    0112345678999998876421     1  1233332   34455555555555555544567777776322


Q ss_pred             ------hhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         137 ------NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       137 ------~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                            +...|.++|..               -..+.+.+|..++  |..|+.-
T Consensus       150 ~~~~~~~~~~Y~asKaa---------------l~~ltr~lA~Ela--~~gIrVN  186 (256)
T 4fs3_A          150 GEFAVQNYNVMGVAKAS---------------LEANVKYLALDLG--PDNIRVN  186 (256)
T ss_dssp             GTSCCTTTHHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             cccCcccchhhHHHHHH---------------HHHHHHHHHHHhC--ccCeEEE
Confidence                  22333333332               1245667777765  5667754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.43  E-value=0.00094  Score=59.70  Aligned_cols=118  Identities=19%  Similarity=0.210  Sum_probs=70.6

Q ss_pred             CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c--cceEeecCccc
Q psy9582           5 PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L--VDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~--~~i~~~~~~~~   79 (329)
                      .+++.|+||+  |++|.+++..|++.|.       +|++.|++    .+ .+....++....... .  .+++-..+..+
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-------~V~~~~r~----~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   88 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGA-------QLAFTYAT----PK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKN   88 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTC-------EEEEEESS----GG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCC----HH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence            4689999998  8999999999999987       89999998    32 221222222110000 0  01100011111


Q ss_pred             -------ccCCccEEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582          80 -------AFKDANIAILIGSFPRK-----S--NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGN  134 (329)
Q Consensus        80 -------al~~aDiVi~~~g~~~~-----~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tN  134 (329)
                             .+...|++|+.+|....     +  ..+   ....+..|+.....+++.+.+... ..+.||++|-
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  161 (285)
T 2p91_A           89 LKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY  161 (285)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence                   23367999999986532     1  122   334567788888788777766542 2356777664

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.43  E-value=0.00012  Score=65.02  Aligned_cols=100  Identities=15%  Similarity=0.125  Sum_probs=59.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCC
Q psy9582           7 RISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKD   83 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
                      ||.|+||+|++|++++..|+..  |.       +|++++++    ..+...    +....... ..++.-..+..+++++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-------QIVAIVRN----PAKAQA----LAAQGITVRQADYGDEAALTSALQG   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-------GEEEEESC----TTTCHH----HHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-------eEEEEEcC----hHhhhh----hhcCCCeEEEcCCCCHHHHHHHHhC
Confidence            5899999999999999999987  65       89999998    333321    11100000 0111111234567899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|+||++++...          ..|+...+.+++.+.+.. .. .+|.+|
T Consensus        66 ~d~vi~~a~~~~----------~~~~~~~~~l~~a~~~~~-~~-~~v~~S  103 (286)
T 2zcu_A           66 VEKLLLISSSEV----------GQRAPQHRNVINAAKAAG-VK-FIAYTS  103 (286)
T ss_dssp             CSEEEECC------------------CHHHHHHHHHHHHT-CC-EEEEEE
T ss_pred             CCEEEEeCCCCc----------hHHHHHHHHHHHHHHHcC-CC-EEEEEC
Confidence            999999887531          135667788888887763 33 344443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=97.42  E-value=0.00038  Score=67.24  Aligned_cols=119  Identities=13%  Similarity=0.051  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC---CCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--------ccCCccceE
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG---DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--------IFPLLVDVS   72 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~---~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--------~~~~~~~i~   72 (329)
                      +.++|.|+||+|++|+.++..|++.   |.       +|++++++... ...++.....+...        ......++.
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~-------~V~~l~R~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~  143 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDG-------RLICLVRAESD-EDARRRLEKTFDSGDPELLRHFKELAADRLE  143 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTC-------EEEEEECSSSH-HHHHHHHHGGGCSSCHHHHHHHHHHHTTTEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCC-------EEEEEECCCCc-HHHHHHHHHHHHhcchhhhhhhhhhccCceE
Confidence            3579999999999999999999987   55       89999998311 10011000000000        000001121


Q ss_pred             e-ecC------------cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          73 V-HEN------------PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        73 ~-~~~------------~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      + ..|            ..+.++++|+||++++....  ....+.+..|+.....+++.+.+.. ...+|.+.|
T Consensus       144 ~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS  214 (478)
T 4dqv_A          144 VVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVST  214 (478)
T ss_dssp             EEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEE
T ss_pred             EEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEee
Confidence            1 111            23456789999999886542  2233456789999999999988863 444444444

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.42  E-value=0.00078  Score=60.12  Aligned_cols=117  Identities=15%  Similarity=0.056  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........   .+++-..+..+.+
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGAGA-------HVILHGVK----PGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESS----TTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    4445444444432210000   0110000111111


Q ss_pred             ------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 ------KDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                            ...|++|..||.....   ..+   ....+..|+...    +.+.+.+.+.  ..+.||+++-
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~Iv~isS  168 (275)
T 4imr_A          102 ERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR--KWGRVVSIGS  168 (275)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECC
Confidence                  3679999998864321   122   233455665544    4444555553  3567777764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.42  E-value=0.00061  Score=60.80  Aligned_cols=123  Identities=14%  Similarity=0.131  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc--------ccchhhhHhhhhhcccCCc---cceE
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS--------QKAIKGVIMEIEDCIFPLL---VDVS   72 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~--------~~~~~~~~~dl~~~~~~~~---~~i~   72 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|+++...        .+.+......+........   .+++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   81 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-------DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK   81 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            347899999999999999999999997       899999972110        1112212222221110000   0110


Q ss_pred             eecCcc-------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCc
Q psy9582          73 VHENPI-------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        73 ~~~~~~-------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP  135 (329)
                      -..+..       +.+...|++|+.+|.....   ..+   ....+..|+.....+.    +.+.+.  ..+.||++|-.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  159 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR--NYGRIVTVSSM  159 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEECCh
Confidence            001111       1234789999999865321   222   3345566766554444    445543  35677777643

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.42  E-value=0.00032  Score=62.25  Aligned_cols=119  Identities=12%  Similarity=0.107  Sum_probs=68.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++... ...+.....|+.+... . ..  ......+.+...
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~-~~~~~~~~~Dl~~~~~-v-~~--~~~~~~~~~g~i   75 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGS-------KVIDLSIHDPG-EAKYDHIECDVTNPDQ-V-KA--SIDHIFKEYGSI   75 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESSCCC-SCSSEEEECCTTCHHH-H-HH--HHHHHHHHHSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEecCccc-CCceEEEEecCCCHHH-H-HH--HHHHHHHHcCCC
Confidence            46899999999999999999999987       89999998311 0111112233332110 0 00  001112234478


Q ss_pred             cEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP  135 (329)
                      |++|..+|.....   ..+   ....+..|+.....+.+.+.++.  ...+.||++|--
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  134 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSV  134 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCc
Confidence            9999998864321   122   33456667766554444443332  134577777643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.42  E-value=0.0001  Score=62.41  Aligned_cols=113  Identities=16%  Similarity=0.114  Sum_probs=69.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK---   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~---   82 (329)
                      ++|.|+||+|++|++++..|++.         +|+++|++    .++++....++...  ....++.-..+..++++   
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---------~V~~~~r~----~~~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~   65 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---------DLLLSGRR----AGALAELAREVGAR--ALPADLADELEAKALLEEAG   65 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---------EEEEECSC----HHHHHHHHHHHTCE--ECCCCTTSHHHHHHHHHHHC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---------CEEEEECC----HHHHHHHHHhccCc--EEEeeCCCHHHHHHHHHhcC
Confidence            47999999999999999998866         38899998    44443322222110  00011111112233344   


Q ss_pred             CccEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          83 DANIAILIGSFPRKS------NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~------g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +.|+||+++|.....      ..+....+..|+.....+.+.+.+.  +.+.||++|-.
T Consensus        66 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~sS~  122 (207)
T 2yut_A           66 PLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ--KGARAVFFGAY  122 (207)
T ss_dssp             SEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE--EEEEEEEECCC
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc--CCcEEEEEcCh
Confidence            899999998865321      1234456778888888888877442  34677777654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.42  E-value=0.00024  Score=63.20  Aligned_cols=118  Identities=8%  Similarity=0.075  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|++.|+++............|+.+... . ..  ......+.+...
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~Dv~~~~~-v-~~--~~~~~~~~~g~i   82 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGA-------KVVSVSLDEKSDVNVSDHFKIDVTNEEE-V-KE--AVEKTTKKYGRI   82 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCC--CTTSSEEEECCTTCHHH-H-HH--HHHHHHHHHSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCchhccCceeEEEecCCCHHH-H-HH--HHHHHHHHcCCC
Confidence            47899999999999999999999987       8999999832111111111223322110 0 00  001112334578


Q ss_pred             cEEEEeCCCCCCCC---CC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSFPRKSN---ME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |++|+.||......   .+   ....+..|+....    .+.+.+.+.  ..+.||+++-.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~  141 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI--GHGSIINIASV  141 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEECch
Confidence            99999998753211   22   2334556665544    444445543  35677777643

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.41  E-value=0.00013  Score=63.46  Aligned_cols=33  Identities=15%  Similarity=0.253  Sum_probs=30.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC--CCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD--LLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~--~~~~~~~~ei~L~D~~   45 (329)
                      ++|.|+||+|++|.+++..|++.|  .       +|+++|++
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~-------~V~~~~r~   38 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIR-------HIIATARD   38 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCC-------EEEEEESS
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCc-------EEEEEecC
Confidence            589999999999999999999988  6       89999998

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.40  E-value=0.00018  Score=63.55  Aligned_cols=34  Identities=21%  Similarity=0.128  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCC---CCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGD---LLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~---~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|++|.+++..|++.|   .       +|+++|++
T Consensus        21 ~k~vlITGasggIG~~la~~L~~~G~~~~-------~V~~~~r~   57 (267)
T 1sny_A           21 MNSILITGCNRGLGLGLVKALLNLPQPPQ-------HLFTTCRN   57 (267)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCS-------EEEEEESC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhcCCCCc-------EEEEEecC
Confidence            3689999999999999999999988   5       89999998

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.40  E-value=0.00078  Score=60.06  Aligned_cols=118  Identities=13%  Similarity=0.062  Sum_probs=69.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENP---   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~---   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++....++........    .+++-..+.   
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   95 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGC-------HTVIASRS----LPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAA   95 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999987       89999998    4444444334432110000    011000111   


Q ss_pred             ----ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEcCc
Q psy9582          78 ----ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKAL----NSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ----~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~tNP  135 (329)
                          .+.+...|++|+.+|.... +  ..+   ....+..|+.....+.+.+    .+.  ..+.||+++--
T Consensus        96 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS~  165 (277)
T 4fc7_A           96 VDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD--HGGVIVNITAT  165 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH--HCEEEEEECCS
T ss_pred             HHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEECch
Confidence                1123478999999886432 1  122   3345666766555555544    332  35677777643

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.40  E-value=0.0011  Score=59.26  Aligned_cols=118  Identities=15%  Similarity=0.139  Sum_probs=68.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENP---   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~---   77 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++.   .+.++....++........    .+++-..+.   
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~-------~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGA-------NIVLNGFGA---PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEECCCC---HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC---hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            36899999999999999999999997       899999951   3334433333332110000    011000111   


Q ss_pred             ----ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          78 ----ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ----~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                          .+.+...|++|..||......   .+   ....+..|+.....+    .+.+.+.  ..+.||+++-
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS  163 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK--GWGRIINIAS  163 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEECC
Confidence                122347899999998753221   22   334456666554444    4445553  3467777764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.40  E-value=0.00021  Score=62.56  Aligned_cols=35  Identities=26%  Similarity=0.240  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|+++|++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-------~V~~~~r~   40 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-------KVGLHGRK   40 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEECCC
Confidence            347899999999999999999999987       89999987

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.39  E-value=0.00012  Score=64.70  Aligned_cols=118  Identities=8%  Similarity=0.150  Sum_probs=70.8

Q ss_pred             CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc
Q psy9582           5 PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~   79 (329)
                      .+++.|+||+  |++|.+++..|++.|.       +|++.|++    .+ .+....++.......   ..+++-..+..+
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-------~V~~~~r~----~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~   75 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGA-------EVALSYQA----ER-LRPEAEKLAEALGGALLFRADVTQDEELDA   75 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTC-------EEEEEESC----GG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCC----HH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence            4689999998  8999999999999987       89999998    32 221222222110000   001100011112


Q ss_pred             c-------cCCccEEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          80 A-------FKDANIAILIGSFPRK-----S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 a-------l~~aDiVi~~~g~~~~-----~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +       +...|++|+.+|....     +  ..+   ....+..|+.....+.+.+.+...+.+.||++|-
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  147 (261)
T 2wyu_A           76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY  147 (261)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence            2       2367999999986532     1  122   3456678888888888877765322456777764

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=97.39  E-value=3.9e-05  Score=68.81  Aligned_cols=63  Identities=8%  Similarity=0.043  Sum_probs=38.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceE-EEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIIL-QLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +||+|||+ |.+|++++..|... .       +| .++|++    .++++.....+     +    . .+.+..++++++
T Consensus         3 m~I~iIG~-G~mG~~la~~l~~~-~-------~v~~v~~~~----~~~~~~~~~~~-----g----~-~~~~~~~~~~~~   59 (276)
T 2i76_A            3 LVLNFVGT-GTLTRFFLECLKDR-Y-------EIGYILSRS----IDRARNLAEVY-----G----G-KAATLEKHPELN   59 (276)
T ss_dssp             -CCEEESC-CHHHHHHHHTTC------------CCCEECSS----HHHHHHHHHHT-----C----C-CCCSSCCCCC--
T ss_pred             ceEEEEeC-CHHHHHHHHHHHHc-C-------cEEEEEeCC----HHHHHHHHHHc-----C----C-ccCCHHHHHhcC
Confidence            47999998 99999999988766 4       68 599998    44443221111     1    1 334556678899


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+||++.
T Consensus        60 DvVilav   66 (276)
T 2i76_A           60 GVVFVIV   66 (276)
T ss_dssp             -CEEECS
T ss_pred             CEEEEeC
Confidence            9999973

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.39  E-value=0.00034  Score=61.98  Aligned_cols=161  Identities=16%  Similarity=0.037  Sum_probs=89.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~--   79 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.++.. .+.+.++....++.......   ..+++-..+..+  
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESV-------NLVLHYHQA-KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSC-------EEEEEESCG-GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCc-cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999987       899988751 11233443344443221000   001111111111  


Q ss_pred             -----ccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC
Q psy9582          80 -----AFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP  148 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~  148 (329)
                           .+...|++|..+|......   .+   ....+..|+.....+.+.+.++..+.+.||+++-......      .+
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~------~~  156 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY------TG  156 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH------HC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC------CC
Confidence                 2347899999998653221   22   3345677888888888777765434567777765432211      11


Q ss_pred             CCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         149 DLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       149 ~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +..   ..+.+-.....+.+.++..++  +..|+..
T Consensus       157 ~~~---~Y~asKaa~~~l~~~la~e~~--~~gi~vn  187 (262)
T 3ksu_A          157 FYS---TYAGNKAPVEHYTRAASKELM--KQQISVN  187 (262)
T ss_dssp             CCC---C-----CHHHHHHHHHHHHTT--TTTCEEE
T ss_pred             CCc---hhHHHHHHHHHHHHHHHHHHH--HcCcEEE
Confidence            111   222222222356777888775  4456543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.39  E-value=0.00027  Score=62.63  Aligned_cols=116  Identities=16%  Similarity=0.144  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP----   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~----   77 (329)
                      .+++.|+||+|.+|.+++..|++.|.       +|++.|++    .++++....++........   .+++-..+.    
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGA-------DLVLAART----VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLV   79 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999987       89999998    5555544444433210000   011000111    


Q ss_pred             ---ccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          78 ---ITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ---~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                         .+.+...|++|+.+|...  .+  ..+   ....+..|+.....+.    +.+.+.   .+.||+++-
T Consensus        80 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~g~iv~isS  147 (264)
T 3ucx_A           80 DETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES---KGAVVNVNS  147 (264)
T ss_dssp             HHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH---TCEEEEECC
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCEEEEECc
Confidence               112346799999987632  22  122   2344556665544444    444442   256667664

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.39  E-value=0.00019  Score=63.79  Aligned_cols=119  Identities=20%  Similarity=0.131  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a   80 (329)
                      +.++|.|+||+|++|.+++..|++.|.       +|++.+++.   .+..+.....+........   .++.-..+..+.
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-------~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-------KVWINYRSN---AEVADALKNELEEKGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            346899999999999999999999987       899999962   2333322223322110000   011000111112


Q ss_pred             -------cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 -------FKDANIAILIGSFPRKSN---ME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 -------l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN  134 (329)
                             ....|++|..+|......   .+   ....+..|+...    +.+.+.+++.  ..+.||+++-
T Consensus        98 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS  166 (271)
T 4iin_A           98 IQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS--RFGSVVNVAS  166 (271)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc--CCCEEEEEec
Confidence                   247899999998754221   12   334455565544    4455555553  3467777764

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.38  E-value=0.00052  Score=65.14  Aligned_cols=101  Identities=11%  Similarity=0.097  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc-c
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA-F   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a-l   81 (329)
                      ..++|.|+|+ |.+|+.++..|...|+       +++++|.+    .++++.    +....... ..+.+-..-+.++ +
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~-------~vvvId~d----~~~v~~----~~~~g~~vi~GDat~~~~L~~agi   66 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGV-------KMVVLDHD----PDHIET----LRKFGMKVFYGDATRMDLLESAGA   66 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTC-------CEEEEECC----HHHHHH----HHHTTCCCEESCTTCHHHHHHTTT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-------CEEEEECC----HHHHHH----HHhCCCeEEEcCCCCHHHHHhcCC
Confidence            3478999998 9999999999999887       89999999    554442    22211111 0111000112233 7


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cch
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPV  136 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~  136 (329)
                      .+||+||++.+.               -..-..++..+++.. |+..||+-+ ++.
T Consensus        67 ~~A~~viv~~~~---------------~~~n~~i~~~ar~~~-p~~~Iiara~~~~  106 (413)
T 3l9w_A           67 AKAEVLINAIDD---------------PQTNLQLTEMVKEHF-PHLQIIARARDVD  106 (413)
T ss_dssp             TTCSEEEECCSS---------------HHHHHHHHHHHHHHC-TTCEEEEEESSHH
T ss_pred             CccCEEEECCCC---------------hHHHHHHHHHHHHhC-CCCeEEEEECCHH
Confidence            899999997422               123344556666664 886665554 454

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.37  E-value=0.00058  Score=59.93  Aligned_cols=110  Identities=10%  Similarity=0.085  Sum_probs=66.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---ccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---PITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---~~~al   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .+.++.    +.... .. .++  ..+   ..+.+
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~----~~~~~-~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGA-------EVTICARN----EELLKR----SGHRY-VV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHH----TCSEE-EE-CCT--TTCHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHh----hCCeE-EE-eeH--HHHHHHHHHHh
Confidence            46899999999999999999999987       89999998    322221    11000 00 111  111   12334


Q ss_pred             CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          82 KDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.|++|+.+|.....   ..+   ....+..|+..    .+.+.+.+.+.  ..+.||++|--
T Consensus        80 ~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~  141 (249)
T 1o5i_A           80 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK--GWGRIVAITSF  141 (249)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEEcch
Confidence            4899999999865321   112   23445556544    45556666654  34677777643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.37  E-value=0.00047  Score=61.31  Aligned_cols=149  Identities=11%  Similarity=0.001  Sum_probs=85.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +.+.|+||++.+|.+++..|++.|.       +|++.|+++.+..........|+.+... . ..  ......+.+..-|
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~~~~~~~~~~~~~~Dv~~~~~-v-~~--~~~~~~~~~G~iD   80 (261)
T 4h15_A           12 KRALITAGTKGAGAATVSLFLELGA-------QVLTTARARPEGLPEELFVEADLTTKEG-C-AI--VAEATRQRLGGVD   80 (261)
T ss_dssp             CEEEESCCSSHHHHHHHHHHHHTTC-------EEEEEESSCCTTSCTTTEEECCTTSHHH-H-HH--HHHHHHHHTSSCS
T ss_pred             CEEEEeccCcHHHHHHHHHHHHcCC-------EEEEEECCchhCCCcEEEEEcCCCCHHH-H-HH--HHHHHHHHcCCCC
Confidence            6788999999999999999999997       8999999831111101111233332210 0 00  0112345567889


Q ss_pred             EEEEeCCCCCC-CC----CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch-------hhHHHHHHHH
Q psy9582          86 IAILIGSFPRK-SN----ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV-------NTNTYITMKS  146 (329)
Q Consensus        86 iVi~~~g~~~~-~g----~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~-------~~~~~~~~~~  146 (329)
                      ++|..+|.... .+    .+   ....+..|+.    ..+...+.+.+.  ..+.||+++--.       ....|.++|.
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~Iv~isS~~~~~~~~~~~~~Y~asKa  158 (261)
T 4h15_A           81 VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR--GSGVVVHVTSIQRVLPLPESTTAYAAAKA  158 (261)
T ss_dssp             EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCCTTTCHHHHHHHH
T ss_pred             EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc--CCceEEEEEehhhccCCCCccHHHHHHHH
Confidence            99998886432 11    22   3344556654    556667777765  467777776322       2333334443


Q ss_pred             CCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         147 APDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       147 ~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .               -..+.+.+|..++  |..|+.-
T Consensus       159 a---------------l~~lt~~lA~Ela--~~gIrVN  179 (261)
T 4h15_A          159 A---------------LSTYSKAMSKEVS--PKGVRVV  179 (261)
T ss_dssp             H---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             H---------------HHHHHHHHHHHhh--hhCeEEE
Confidence            2               1245667777765  5567654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.37  E-value=0.00034  Score=63.03  Aligned_cols=120  Identities=16%  Similarity=0.071  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEe-ec------C
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSV-HE------N   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~-~~------~   76 (329)
                      .++|.|+||+|++|.+++..|++.|.       +|+++|++    .+.++....++.....+ ...++.. ..      +
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~   86 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGS-------NVVIASRK----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEE   86 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhccccCCccEEEEecCCCCHHH
Confidence            36899999999999999999999987       89999998    44444443444321000 0001111 11      1


Q ss_pred             ccccc-------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh-c-CCCeEEEEEcCc
Q psy9582          77 PITAF-------KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSV-A-SRDVKVLVVGNP  135 (329)
Q Consensus        77 ~~~al-------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~-~-~p~a~viv~tNP  135 (329)
                      ..+++       ...|+||++||.....   ..+   ....+..|+.....+++.+.+. . ...+.||+++-.
T Consensus        87 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~  160 (303)
T 1yxm_A           87 VNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP  160 (303)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEee
Confidence            11222       3589999998854311   122   2345667777776666654431 0 024566666543

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=97.37  E-value=0.00077  Score=59.53  Aligned_cols=64  Identities=14%  Similarity=0.193  Sum_probs=45.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.+|..++..|...|+       +|+++|+.  +.++.++    .+....      +.  ++..++++++|
T Consensus         1 M~I~iIG~-G~mG~~la~~l~~~g~-------~V~~~~~~--~~~~~~~----~~~~~g------~~--~~~~~~~~~aD   58 (264)
T 1i36_A            1 LRVGFIGF-GEVAQTLASRLRSRGV-------EVVTSLEG--RSPSTIE----RARTVG------VT--ETSEEDVYSCP   58 (264)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC-------EEEECCTT--CCHHHHH----HHHHHT------CE--ECCHHHHHTSS
T ss_pred             CeEEEEec-hHHHHHHHHHHHHCCC-------eEEEeCCc--cCHHHHH----HHHHCC------Cc--CCHHHHHhcCC
Confidence            48999998 9999999999999887       89998773  0122222    222211      22  44567789999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +||++.
T Consensus        59 vvi~~v   64 (264)
T 1i36_A           59 VVISAV   64 (264)
T ss_dssp             EEEECS
T ss_pred             EEEEEC
Confidence            999983

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.37  E-value=0.00029  Score=62.68  Aligned_cols=118  Identities=18%  Similarity=0.185  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcc---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPI---   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~---   78 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.|++.   .+.++....++........   .+++-..+..   
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~-------~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~   97 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGA-------KVAVNYASS---AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALF   97 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCC---hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46789999999999999999999987       899999851   3333333333332210000   0110001111   


Q ss_pred             ----cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          79 ----TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ----~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                          +.+...|++|+.||.....   ..+   ....+..|+.....    +.+.+.+.  ..+.||+++-
T Consensus        98 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS  165 (269)
T 4dmm_A           98 AAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ--RSGRIINIAS  165 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECc
Confidence                1233789999999875422   122   33445666654444    44445543  3456777764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.37  E-value=0.00042  Score=55.08  Aligned_cols=33  Identities=9%  Similarity=0.185  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+|+ |.+|++++..|...|.       +|+++|.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~-------~V~~id~~   38 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGK-------KVLAVDKS   38 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEECC
Confidence            468999999 9999999999999887       89999998

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.36  E-value=0.00047  Score=61.14  Aligned_cols=121  Identities=15%  Similarity=0.204  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcc-
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPI-   78 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~-   78 (329)
                      .+.+.+.|+||+|++|.+++..|++.|.       +|++.|.+.   .+.++.....+........   .+++-..+.. 
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   92 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-------AVAVSHSER---NDHVSTWLMHERDAGRDFKAYAVDVADFESCER   92 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEECSC---HHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCc---hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            3446789999999999999999999987       899999652   2333322222222110000   0110000111 


Q ss_pred             ------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q psy9582          79 ------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tNP  135 (329)
                            +.+...|++|..+|.....   ..+   ....+..|+.....+    .+.+.+.  ..+.||+++-.
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~isS~  163 (269)
T 3gk3_A           93 CAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER--RFGRIVNIGSV  163 (269)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEeCCh
Confidence                  1233789999999865321   122   234455666554444    4444443  45677777753

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.35  E-value=0.0021  Score=56.77  Aligned_cols=151  Identities=16%  Similarity=0.151  Sum_probs=91.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEee------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVH------   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~------   74 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       .|+++|++    +++++..+.++........   .+++-.      
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-------~Vv~~~~~----~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~   74 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-------IVVAVELL----EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEF   74 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            446788999999999999999999997       89999999    6666655556654321110   011100      


Q ss_pred             -cCcccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------
Q psy9582          75 -ENPITAFKDANIAILIGSFPR--KS--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------  136 (329)
Q Consensus        75 -~~~~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------  136 (329)
                       ....+.+..-|++|..||...  .+  ..+   +...+..|+.    ..+..++.|.+.  ..+.||+++--.      
T Consensus        75 ~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~IVnisS~~g~~~~~  152 (254)
T 4fn4_A           75 VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ--GKGVIVNTASIAGIRGGF  152 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTCSSS
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEEechhhcCCCC
Confidence             112234567899999988532  22  123   3345555654    556677777765  367788876322      


Q ss_pred             hhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         137 NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +...|.++|..               -..+.+.+|..++  |..|+.-
T Consensus       153 ~~~~Y~asKaa---------------l~~ltr~lA~ela--~~gIrVN  183 (254)
T 4fn4_A          153 AGAPYTVAKHG---------------LIGLTRSIAAHYG--DQGIRAV  183 (254)
T ss_dssp             SCHHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             CChHHHHHHHH---------------HHHHHHHHHHHhh--hhCeEEE
Confidence            22334444432               1245667777765  5567754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.35  E-value=0.00063  Score=60.60  Aligned_cols=122  Identities=16%  Similarity=0.122  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc---chhhhHhhhhhcccCC---ccceEeecC-
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK---AIKGVIMEIEDCIFPL---LVDVSVHEN-   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~---~~~~~~~dl~~~~~~~---~~~i~~~~~-   76 (329)
                      +.+++.|+||+|.+|.+++..|++.|.       +|++.|++..+.++   .++....++.......   ..+++-..+ 
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   77 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-------NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQV   77 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            457899999999999999999999987       89999998321100   1222222222111000   001100001 


Q ss_pred             ------cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          77 ------PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ------~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                            ..+.+...|++|+.+|......   .+   ....+..|+.....+.    +.+.+.  ..+.||+++-
T Consensus        78 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS  149 (274)
T 3e03_A           78 RAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA--PNPHILTLAP  149 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS--SSCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc--CCceEEEECC
Confidence                  1122347899999998753221   22   3345566766554444    444442  3567777764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.34  E-value=0.00085  Score=59.54  Aligned_cols=120  Identities=12%  Similarity=0.113  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~--   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|.+.   .+.++....++........   .+++-..+..+  
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   87 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGA-------KVVVNYANS---TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLF   87 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCC---HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999987       899988762   2333333333332210000   01100011111  


Q ss_pred             -----ccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          80 -----AFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                           .+...|++|+.+|......   .+   ....+..|+.....+.+.+.++..+.+.||+++-
T Consensus        88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS  153 (270)
T 3is3_A           88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS  153 (270)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence                 2236799999988753211   22   3455677888777777777766544566777654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.34  E-value=0.0004  Score=61.73  Aligned_cols=112  Identities=14%  Similarity=0.157  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH--------hhhhhcccCCccceE-eec
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI--------MEIEDCIFPLLVDVS-VHE   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~--------~dl~~~~~~~~~~i~-~~~   75 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++...        .|+.+..     .+. ...
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~Dv~d~~-----~v~~~~~   79 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGH-------PLLLLARR----VERLKALNLPNTLCAQVDVTDKY-----TFDTAIT   79 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESC----HHHHHTTCCTTEEEEECCTTCHH-----HHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHhhcCCceEEEecCCCHH-----HHHHHHH
Confidence            35789999999999999999999987       89999998    43333211        1111100     000 000


Q ss_pred             CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          76 NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                      ...+.+...|++|..||.....   ..+   ....+..|+.....    +.+.+.+.  ..+.||+++-
T Consensus        80 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~IV~isS  146 (266)
T 3p19_A           80 RAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR--NCGTIINISS  146 (266)
T ss_dssp             HHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             HHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcC
Confidence            1122234789999999865321   122   33446667665544    55555554  3456777764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.34  E-value=0.00029  Score=57.05  Aligned_cols=32  Identities=9%  Similarity=0.202  Sum_probs=29.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+|.|+|+ |.+|+.++..|...|.       +|+++|.+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~-------~V~vid~~   35 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQ-------NVTVISNL   35 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-------CEEEEECC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCC-------CEEEEECC
Confidence            68999998 9999999999998886       89999997

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.33  E-value=0.0012  Score=58.78  Aligned_cols=117  Identities=17%  Similarity=0.173  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN-----   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~-----   76 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++     +.++....++.......   ..++.-..+     
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   98 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGA-------HVLAWGRT-----DGVKEVADEIADGGGSAEAVVADLADLEGAANVA   98 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS-----THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999987       89999954     22332333333211000   000000000     


Q ss_pred             -cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 -PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 -~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                       ..+.....|++|..||......   .+   ....+..|+.....    +.+.+.+.  ..+.||+++-.
T Consensus        99 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~IV~isS~  166 (273)
T 3uf0_A           99 EELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH--GSGRIVTIASM  166 (273)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcch
Confidence             0112247899999998754211   12   33455666655444    44455554  35677777643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.33  E-value=0.00011  Score=66.13  Aligned_cols=81  Identities=21%  Similarity=0.187  Sum_probs=49.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC-cc-cc-cchhhhHhhhhhcccCC-ccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN-KK-SQ-KAIKGVIMEIEDCIFPL-LVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~-~~-~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al   81 (329)
                      +||.|+||+|++|++++..|+..|.       +|++++++. .. .. +++.. ..++....... ..++.-..++.+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~-~~~l~~~~v~~v~~D~~d~~~l~~~~   74 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGN-------PTYALVRKTITAANPETKEEL-IDNYQSLGVILLEGDINDHETLVKAI   74 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTC-------CEEEEECCSCCSSCHHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCC-------cEEEEECCCcccCChHHHHHH-HHHHHhCCCEEEEeCCCCHHHHHHHH
Confidence            4699999999999999999999886       799999872 00 00 22221 11222111000 01111112346788


Q ss_pred             CCccEEEEeCCCC
Q psy9582          82 KDANIAILIGSFP   94 (329)
Q Consensus        82 ~~aDiVi~~~g~~   94 (329)
                      +++|+||++++..
T Consensus        75 ~~~d~vi~~a~~~   87 (307)
T 2gas_A           75 KQVDIVICAAGRL   87 (307)
T ss_dssp             TTCSEEEECSSSS
T ss_pred             hCCCEEEECCccc
Confidence            9999999998754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.32  E-value=0.00025  Score=62.82  Aligned_cols=151  Identities=13%  Similarity=0.131  Sum_probs=90.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEee-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVH-------   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~-------   74 (329)
                      .+.+.|+||++.+|.+++..|++.|.       .|++.|++    ++.++..+.++.+....   +..+++-.       
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga-------~Vvi~~~~----~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~   77 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGA-------RVILNDIR----ATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAF   77 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEECCSC----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            46788889999999999999999997       89999999    55565555555432111   00111100       


Q ss_pred             cCcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hh
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NT  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~  138 (329)
                      ....+.+..-|++|..||......   .+   +...+..|+.    ..+..++.+.+.. ..+.||+++--.      +.
T Consensus        78 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~~G~IVnisS~~~~~~~~~~  156 (255)
T 4g81_D           78 SKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARN-SGGKIINIGSLTSQAARPTV  156 (255)
T ss_dssp             HHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGTSBCTTC
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcc-CCCEEEEEeehhhcCCCCCc
Confidence            112233567899999988654221   22   4445566665    4556667675542 567888886332      22


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|.++|..               -..+.+.+|..++  |..|+.-
T Consensus       157 ~~Y~asKaa---------------l~~ltr~lA~ela--~~gIrVN  185 (255)
T 4g81_D          157 APYTAAKGG---------------IKMLTCSMAAEWA--QFNIQTN  185 (255)
T ss_dssp             HHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             hhHHHHHHH---------------HHHHHHHHHHHhc--ccCeEEE
Confidence            333333332               1246667777765  5567654

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=97.32  E-value=0.0003  Score=64.88  Aligned_cols=60  Identities=18%  Similarity=0.248  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..+|++    .+...+               +....++.+.+++|
T Consensus       164 g~~vgIIG~-G~iG~~vA~~l~~~G~-------~V~~~dr~----~~~~~g---------------~~~~~~l~ell~~a  216 (333)
T 3ba1_A          164 GKRVGIIGL-GRIGLAVAERAEAFDC-------PISYFSRS----KKPNTN---------------YTYYGSVVELASNS  216 (333)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTC-------CEEEECSS----CCTTCC---------------SEEESCHHHHHHTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEECCC----chhccC---------------ceecCCHHHHHhcC
Confidence            468999999 9999999999998886       89999998    322210               12234667789999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+++.
T Consensus       217 DvVil~v  223 (333)
T 3ba1_A          217 DILVVAC  223 (333)
T ss_dssp             SEEEECS
T ss_pred             CEEEEec
Confidence            9999974

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.31  E-value=0.00032  Score=61.51  Aligned_cols=114  Identities=13%  Similarity=0.164  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh---hHhhhhhcccCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++    .++++.   ...|+.+... . ..  ......+.+
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~D~~~~~~-~-~~--~~~~~~~~~   79 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGH-------KVAVTHRG----SGAPKGLFGVEVDVTDSDA-V-DR--AFTAVEEHQ   79 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESS----SCCCTTSEEEECCTTCHHH-H-HH--HHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHhcCeeccCCCHHH-H-HH--HHHHHHHHc
Confidence            36899999999999999999999987       89999998    333321   2233332110 0 00  001112234


Q ss_pred             CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHhhhcCCCeEEEEEcCc
Q psy9582          82 KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGK----ALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~----~i~~~~~p~a~viv~tNP  135 (329)
                      ...|++|+.+|.....   ..+   ....+..|+.....+.+    .+++.  ..+.||+++-.
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS~  141 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN--KFGRMIFIGSV  141 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCEEEEECCH
Confidence            4679999999865321   122   33455666665555444    44442  34677777643

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.31  E-value=0.00061  Score=63.40  Aligned_cols=39  Identities=18%  Similarity=0.420  Sum_probs=29.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||++++||+|+||+|.+|..+...|.....+      ||..+...
T Consensus         3 ~M~~~~kVaIvGATGyvG~eLlrlL~~hP~~------el~~l~S~   41 (359)
T 4dpl_A            3 LMRRTLKAAILGATGLVGIEYVRMLSNHPYI------KPAYLAGK   41 (359)
T ss_dssp             ---CCEEEEETTTTSTTHHHHHHHHTTCSSE------EEEEEEES
T ss_pred             cCCCCCeEEEECCCCHHHHHHHHHHHhCCCc------eEEEEECc
Confidence            4666789999999999999999977765543      78877544

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.31  E-value=0.00061  Score=63.40  Aligned_cols=39  Identities=18%  Similarity=0.420  Sum_probs=29.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||++++||+|+||+|.+|..+...|.....+      ||..+...
T Consensus         3 ~M~~~~kVaIvGATGyvG~eLlrlL~~hP~~------el~~l~S~   41 (359)
T 4dpk_A            3 LMRRTLKAAILGATGLVGIEYVRMLSNHPYI------KPAYLAGK   41 (359)
T ss_dssp             ---CCEEEEETTTTSTTHHHHHHHHTTCSSE------EEEEEEES
T ss_pred             cCCCCCeEEEECCCCHHHHHHHHHHHhCCCc------eEEEEECc
Confidence            4666789999999999999999977765543      78877544

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.31  E-value=0.00014  Score=66.02  Aligned_cols=81  Identities=17%  Similarity=0.208  Sum_probs=49.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC-cc-cccchhhhHhhhhhcccCC-ccceEeecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN-KK-SQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~-~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
                      ++|.|+||+|++|++++..|+..|.       +|++++++. .. ..++.. ...++....... ..++.-..++.++++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~-~l~~~~~~~v~~v~~D~~d~~~l~~a~~   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSH-------PTFIYARPLTPDSTPSSVQ-LREEFRSMGVTIIEGEMEEHEKMVSVLK   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC-------CEEEEECCCCTTCCHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCC-------cEEEEECCcccccChHHHH-HHHHhhcCCcEEEEecCCCHHHHHHHHc
Confidence            5799999999999999999999886       799999982 00 001111 111121111000 011111123567899


Q ss_pred             CccEEEEeCCCC
Q psy9582          83 DANIAILIGSFP   94 (329)
Q Consensus        83 ~aDiVi~~~g~~   94 (329)
                      ++|+||++++..
T Consensus        77 ~~d~vi~~a~~~   88 (321)
T 3c1o_A           77 QVDIVISALPFP   88 (321)
T ss_dssp             TCSEEEECCCGG
T ss_pred             CCCEEEECCCcc
Confidence            999999987753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.30  E-value=0.00081  Score=60.14  Aligned_cols=34  Identities=21%  Similarity=0.153  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+.|+||+|.+|.+++..|++.|.       +|+++|++
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~-------~V~~~~~~   44 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGA-------DIIAVDIC   44 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecc
Confidence            47899999999999999999999997       89999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.30  E-value=0.0012  Score=58.67  Aligned_cols=119  Identities=19%  Similarity=0.190  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc
Q psy9582           4 KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~   78 (329)
                      +.+++.|+||+  |++|.+++..|++.|.       +|++.|++    .+ .+....++.......   ..++.-..+..
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-------~V~~~~r~----~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-------TLAFTYLN----ES-LEKRVRPIAQELNSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-------EEEEEESS----TT-THHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEeCC----HH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHH
Confidence            34689999998  9999999999999987       89999998    32 221222222110000   00110001111


Q ss_pred             c-------ccCCccEEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 T-------AFKDANIAILIGSFPRK-----S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ~-------al~~aDiVi~~~g~~~~-----~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +       .+...|++|+.+|....     +  ..+   ....+..|+.....+.+.+.+...+.+.||++|-
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY  145 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence            1       23367999999986532     1  122   3356678888888888887766423457777764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.29  E-value=0.0013  Score=60.85  Aligned_cols=125  Identities=21%  Similarity=0.194  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccccc---chhhhHhhhhhcccCC---ccceEeecCc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQK---AIKGVIMEIEDCIFPL---LVDVSVHENP-   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~---~~~~~~~dl~~~~~~~---~~~i~~~~~~-   77 (329)
                      .+.+.|+||+|.+|.+++..|++.|.       +|++.+++..+.++   .++....++.......   ..+++-..+. 
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCC-------EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            36799999999999999999999987       89999998321111   1222222332211000   0011000111 


Q ss_pred             ------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCch
Q psy9582          78 ------ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNPV  136 (329)
Q Consensus        78 ------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP~  136 (329)
                            .+.+...|++|..+|.....   ..+   ....+..|+.....+.+.+..+.  ...+.||++|-+.
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~  190 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL  190 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH
Confidence                  11234789999998864321   122   33456677776655555543321  1346778877543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.29  E-value=0.0011  Score=59.17  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|+||+|++|.+++..|+..|.       +|+++|++
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~-------~V~~~~r~   61 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGA-------HVVVTARS   61 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC
Confidence            46899999999999999999999987       89999998

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.28  E-value=0.00077  Score=58.95  Aligned_cols=124  Identities=13%  Similarity=0.114  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCccc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPIT   79 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~   79 (329)
                      .+.+++.|+||+|++|.+++..|++.|.       .|++.+.+.   .+.++....++........   .++.-..+..+
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR---KEEAEETVYEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---SHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCc---hHHHHHHHHHHHhcCCceEEEecCcCCHHHHHH
Confidence            3457899999999999999999999987       788864441   3334434444432210000   00000000011


Q ss_pred             cc-------------CCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          80 AF-------------KDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        80 al-------------~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      .+             ...|++|+.+|......   .+   ....+..|+.....+.+.+.+...+.+.||+++-..
T Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~  150 (255)
T 3icc_A           75 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA  150 (255)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred             HHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence            11             13899999988643211   12   234566787777777777766543456777777543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.27  E-value=0.002  Score=57.68  Aligned_cols=34  Identities=21%  Similarity=0.256  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~-------~V~~~~r~   56 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGY-------RVVIHYHN   56 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTC-------EEEEEESS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------eEEEEeCC
Confidence            46899999999999999999999987       89999998

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.27  E-value=0.00019  Score=63.80  Aligned_cols=113  Identities=12%  Similarity=0.126  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh---hHhhhhhcccCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++.    +.+..   ...|+.+...  ...  ......+.+
T Consensus        28 gk~vlVTGas~gIG~aia~~la~~G~-------~V~~~~r~~----~~~~~~~~~~~Dv~~~~~--~~~--~~~~~~~~~   92 (266)
T 3uxy_A           28 GKVALVTGAAGGIGGAVVTALRAAGA-------RVAVADRAV----AGIAADLHLPGDLREAAY--ADG--LPGAVAAGL   92 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEECSSCC----TTSCCSEECCCCTTSHHH--HHH--HHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH----HHHHhhhccCcCCCCHHH--HHH--HHHHHHHhc
Confidence            46899999999999999999999987       899999982    22221   1223322110  000  001122344


Q ss_pred             CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                      ...|++|..||.....   ..+   ....+..|+.....++    +.+.+.  ..+.||+++-
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS  153 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA--GGGAIVNVAS  153 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECC
Confidence            5789999999875421   122   3344566666544444    444553  3567777764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.27  E-value=0.00026  Score=62.72  Aligned_cols=113  Identities=14%  Similarity=0.113  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-----hHhhhhhcccCCccceE-eecCc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-----VIMEIEDCIFPLLVDVS-VHENP   77 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-----~~~dl~~~~~~~~~~i~-~~~~~   77 (329)
                      +.+++.|+||+|++|.+++..|++.|.       +|++.|++.    +....     ...|+.+..     .+. .....
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~Dv~d~~-----~v~~~~~~~   90 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-------RVVATSRSI----KPSADPDIHTVAGDISKPE-----TADRIVREG   90 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSC----CCCSSTTEEEEESCTTSHH-----HHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCh----hhcccCceEEEEccCCCHH-----HHHHHHHHH
Confidence            346899999999999999999999987       899999983    22211     122332211     000 00111


Q ss_pred             ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582          78 ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN  134 (329)
                      .+.+...|++|+.||......   .+   ....+..|+.....+.    +.+.+.  ..+.||+++-
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS  155 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ--GSGHIVSITT  155 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEEec
Confidence            233458999999998753211   22   3345566766554444    444553  3566666653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.27  E-value=0.00091  Score=60.35  Aligned_cols=123  Identities=13%  Similarity=0.127  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc--------cccchhhhHhhhhhcccCCc---cceEe
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK--------SQKAIKGVIMEIEDCIFPLL---VDVSV   73 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--------~~~~~~~~~~dl~~~~~~~~---~~i~~   73 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|+++|+++..        ..+.++....++........   .+++-
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGA-------DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            46899999999999999999999997       89999987210        01222222223322110000   01100


Q ss_pred             ecCcc-------cccCCccEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          74 HENPI-------TAFKDANIAILIGSFPRKS----NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        74 ~~~~~-------~al~~aDiVi~~~g~~~~~----g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ..+..       +.+...|++|..+|.....    ..+   ....+..|+.....    +.+.+.+. ...+.||++|--
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~~g~Iv~isS~  179 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG-KRGGSIVFTSSI  179 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCcEEEEECCh
Confidence            01111       1234789999998864321    122   33455666654444    44445543 245777777643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.27  E-value=0.00027  Score=62.31  Aligned_cols=35  Identities=17%  Similarity=0.299  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.+.|+||+|++|.+++..|++.|.       +|++.|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~   42 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-------QVVVLDIR   42 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEESS
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCc
Confidence            346899999999999999999999987       89999987

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.26  E-value=0.00059  Score=59.55  Aligned_cols=114  Identities=16%  Similarity=0.182  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh---------hhhhcccCCccce
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM---------EIEDCIFPLLVDV   71 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~---------dl~~~~~~~~~~i   71 (329)
                      |..+.+++.|+||+|++|.+++..|++ +.       .|+++|++    .+.++....         |+.+..     ..
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~D~~~~~-----~~   63 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DH-------IVYALGRN----PEHLAALAEIEGVEPIESDIVKEV-----LE   63 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TS-------EEEEEESC----HHHHHHHHTSTTEEEEECCHHHHH-----HT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CC-------eEEEEeCC----HHHHHHHHhhcCCcceecccchHH-----HH
Confidence            344567899999999999999999987 54       79999998    443332211         111110     00


Q ss_pred             EeecCcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          72 SVHENPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        72 ~~~~~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .......+.+...|++|..+|......   .+   ....+..|+..    .+.+.+.+++.   .+.||+++-
T Consensus        64 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~g~iv~isS  133 (245)
T 3e9n_A           64 EGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA---SGCVIYINS  133 (245)
T ss_dssp             SSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEC-
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---CCeEEEEcC
Confidence            000111233457899999988653221   11   22345556654    44555555543   255666653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.26  E-value=0.0013  Score=57.11  Aligned_cols=125  Identities=14%  Similarity=0.072  Sum_probs=68.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc--
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA--   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a--   80 (329)
                      ++|.|+||+|++|.+++..|++.|....+-..+|++.+++    .+.++....++.......   ..+++-..+..++  
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT----AADLEKISLECRAEGALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC----HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence            5799999999999999999998875210001268999988    444443333332211000   0000000011112  


Q ss_pred             -----cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhcCCCeEEEEEcCch
Q psy9582          81 -----FKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKA----LNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        81 -----l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~----i~~~~~p~a~viv~tNP~  136 (329)
                           +...|+||+++|......   .+   ....+..|+.....+.+.    +.+.  ..+.||++|-..
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~~  147 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ--HSGHIFFITSVA  147 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGG
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCEEEEEecch
Confidence                 237899999998753211   12   334456666655554444    4433  356777776543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.25  E-value=0.00019  Score=63.43  Aligned_cols=119  Identities=18%  Similarity=0.110  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc
Q psy9582           4 KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~   78 (329)
                      +.++|.|+||+  |++|.+++..|++.|.       +|++.|++    ....+ ...++.......   ..+++-..+..
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGA-------ELAFTYVG----DRFKD-RITEFAAEFGSELVFPCDVADDAQID   80 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-------EEEEEESS----GGGHH-HHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCC-------CEEEEecc----hhhHH-HHHHHHHHcCCcEEEECCCCCHHHHH
Confidence            35799999998  9999999999999987       89999988    22111 112221111000   00111001111


Q ss_pred             -------cccCCccEEEEeCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          79 -------TAFKDANIAILIGSFPRK-----S--N-ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 -------~al~~aDiVi~~~g~~~~-----~--g-~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                             +.+..-|++|+.+|....     +  . .+   ....+..|+.....+.+.+.+...+.+.||+++-
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS  154 (271)
T 3ek2_A           81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY  154 (271)
T ss_dssp             HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence                   122367999999986431     1  1 22   3345667877777777777766434566777664

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=96.34  E-value=4.4e-05  Score=65.29  Aligned_cols=63  Identities=11%  Similarity=0.139  Sum_probs=45.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|+.++..|...+.       +|.++|++    .+ .+.    +...      .+... +..++++++
T Consensus        19 ~~~I~iIG~-G~mG~~la~~L~~~G~-------~V~~~~r~----~~-~~~----~~~~------g~~~~-~~~~~~~~a   74 (201)
T 2yjz_A           19 QGVVCIFGT-GDFGKSLGLKMLQCGY-------SVVFGSRN----PQ-VSS----LLPR------GAEVL-CYSEAASRS   74 (201)
Confidence            368999998 9999999999998876       79999988    32 221    1111      12223 456788999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+||++.
T Consensus        75 DvVilav   81 (201)
T 2yjz_A           75 DVIVLAV   81 (201)
Confidence            9999973

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.24  E-value=0.00012  Score=68.26  Aligned_cols=73  Identities=21%  Similarity=0.356  Sum_probs=46.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      .++|||+|+|| |++|+.++..|.+. .       +|.+.|++    .++++..    .+.......++.-...+.+.++
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~~-~-------~v~~~~~~----~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~   76 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKDE-F-------DVYIGDVN----NENLEKV----KEFATPLKVDASNFDKLVEVMK   76 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTTT-S-------EEEEEESC----HHHHHHH----TTTSEEEECCTTCHHHHHHHHT
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhcC-C-------CeEEEEcC----HHHHHHH----hccCCcEEEecCCHHHHHHHHh
Confidence            45689999999 99999999888643 2       89999998    4444422    1111010001111123456789


Q ss_pred             CccEEEEeCC
Q psy9582          83 DANIAILIGS   92 (329)
Q Consensus        83 ~aDiVi~~~g   92 (329)
                      ++|+||.+.+
T Consensus        77 ~~DvVi~~~p   86 (365)
T 3abi_A           77 EFELVIGALP   86 (365)
T ss_dssp             TCSEEEECCC
T ss_pred             CCCEEEEecC
Confidence            9999999854

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.24  E-value=0.001  Score=59.22  Aligned_cols=122  Identities=15%  Similarity=0.138  Sum_probs=67.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc--------cccchhhhHhhhhhcccCCc---cceEe
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK--------SQKAIKGVIMEIEDCIFPLL---VDVSV   73 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--------~~~~~~~~~~dl~~~~~~~~---~~i~~   73 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|+++..        ..+.++....++........   .+++-
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   85 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGA-------DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD   85 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            46899999999999999999999997       89999986210        01222222222222110000   01100


Q ss_pred             ecCcccc-------cCCccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          74 HENPITA-------FKDANIAILIGSFPRKSN--MERSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        74 ~~~~~~a-------l~~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                      ..+..+.       +...|++|+.+|......  .+....+..|+.....    +.+.+.+.. ..+.||+++-
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS  158 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG-TGGSIVLISS  158 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-SCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCcEEEEEcc
Confidence            0111122       237899999998753221  1233455666654444    444455542 4567777764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.23  E-value=0.0011  Score=59.44  Aligned_cols=35  Identities=23%  Similarity=0.158  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEe-cC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLE-AS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D-~~   45 (329)
                      +.+++.|+||+|.+|.+++..|++.|.       +|++.| ++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~r~   43 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-------AVCLHYHRS   43 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEcCCC
Confidence            346899999999999999999999987       899999 87

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.22  E-value=0.00066  Score=61.16  Aligned_cols=119  Identities=11%  Similarity=0.076  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCCc--hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc--
Q psy9582           5 PVRISITGAAGQ--IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP--   77 (329)
Q Consensus         5 ~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~--   77 (329)
                      .+++.|+||+|+  +|.+++..|++.|.       +|++.|++    ++..+ ...++.......   ..+++-..+.  
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~   98 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGA-------ELAFTYQG----DALKK-RVEPLAEELGAFVAGHCDVADAASIDA   98 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTC-------EEEEEECS----HHHHH-HHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCC-------EEEEEcCC----HHHHH-HHHHHHHhcCCceEEECCCCCHHHHHH
Confidence            468999999877  99999999999987       89999988    22111 111221110000   0011000111  


Q ss_pred             -----ccccCCccEEEEeCCCCC-----CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 -----ITAFKDANIAILIGSFPR-----KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 -----~~al~~aDiVi~~~g~~~-----~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                           .+.+...|++|..+|...     .+  ..+   ....+..|+.....+.+.+.++....+.||+++-.
T Consensus        99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A           99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence                 122347899999998753     11  122   33456778877777777776654446777777643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.21  E-value=0.00024  Score=62.75  Aligned_cols=34  Identities=12%  Similarity=0.088  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.+.+
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~-------~v~~~~~~   40 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY-------SVTVTYHS   40 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC-------EEEEEcCC
Confidence            35799999999999999999999987       89999877

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.21  E-value=0.0014  Score=59.01  Aligned_cols=76  Identities=18%  Similarity=0.296  Sum_probs=47.0

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceE-EEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIIL-QLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT   79 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~   79 (329)
                      |.+++||+|+||+|.||+.++..+.+..-+      +| ..+|.+    .....|  .|+.... .. ...+.++.++.+
T Consensus        18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~------eLvg~vd~~----~~~~~G--~d~gel~-G~~~~gv~v~~dl~~   84 (288)
T 3ijp_A           18 GPGSMRLTVVGANGRMGRELITAIQRRKDV------ELCAVLVRK----GSSFVD--KDASILI-GSDFLGVRITDDPES   84 (288)
T ss_dssp             ---CEEEEESSTTSHHHHHHHHHHHTCSSE------EEEEEBCCT----TCTTTT--SBGGGGT-TCSCCSCBCBSCHHH
T ss_pred             ccCCeEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecC----Cccccc--cchHHhh-ccCcCCceeeCCHHH
Confidence            456689999998899999999988865422      44 455765    211111  2222211 11 124566778888


Q ss_pred             ccCCccEEEEe
Q psy9582          80 AFKDANIAILI   90 (329)
Q Consensus        80 al~~aDiVi~~   90 (329)
                      .+.++|+||-.
T Consensus        85 ll~~aDVvIDF   95 (288)
T 3ijp_A           85 AFSNTEGILDF   95 (288)
T ss_dssp             HTTSCSEEEEC
T ss_pred             HhcCCCEEEEc
Confidence            88999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.20  E-value=0.001  Score=58.04  Aligned_cols=115  Identities=11%  Similarity=0.033  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-e--cCCcccccchhhhHhhhhhcccCCc--cceE-eecCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-E--ASNKKSQKAIKGVIMEIEDCIFPLL--VDVS-VHENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D--~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~-~~~~~~~   79 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++. +  ++    .++++....++ ... ...  ..+. ......+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~~~~r~----~~~~~~~~~~~-~~~-~~~~~~~v~~~~~~~~~   68 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGY-------TVVCHDASFAD----AAERQRFESEN-PGT-IALAEQKPERLVDATLQ   68 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-------EEEECCGGGGS----HHHHHHHHHHS-TTE-EECCCCCGGGHHHHHGG
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCcCC----HHHHHHHHHHh-CCC-cccCHHHHHHHHHHHHH
Confidence            4799999999999999999999987       89999 6  87    44444333222 100 000  0000 0001122


Q ss_pred             ccCCccEEEEeCCCCCC----C--CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 AFKDANIAILIGSFPRK----S--NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~----~--g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+...|++|+.+|....    +  ..+   ....+..|+.....    +.+.+.+.  ..+.||+++--
T Consensus        69 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~g~iv~isS~  135 (244)
T 1zmo_A           69 HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA--GGASVIFITSS  135 (244)
T ss_dssp             GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCG
T ss_pred             HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECCh
Confidence            34478999999986533    1  122   33455666654444    44444443  35677777643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.20  E-value=0.0005  Score=54.84  Aligned_cols=33  Identities=21%  Similarity=0.301  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+|.|+|+ |.+|..++..|...|.       +++++|.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~-------~v~vid~~   39 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDI-------PLVVIETS   39 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCC-------CEEEEECC
Confidence            368999998 9999999999999887       89999999

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.20  E-value=0.00027  Score=60.73  Aligned_cols=72  Identities=8%  Similarity=0.160  Sum_probs=45.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc-ccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT-AFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~-al~~a   84 (329)
                      |||.|+|+ |.+|+.++..|...+.       +++++|.+    +++++...... ... ....+.+-...+.+ .+++|
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~-------~v~vid~~----~~~~~~l~~~~-~~~-~i~gd~~~~~~l~~a~i~~a   66 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY-------GVVIINKD----RELCEEFAKKL-KAT-IIHGDGSHKEILRDAEVSKN   66 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC-------CEEEEESC----HHHHHHHHHHS-SSE-EEESCTTSHHHHHHHTCCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC----HHHHHHHHHHc-CCe-EEEcCCCCHHHHHhcCcccC
Confidence            57999998 9999999999999887       89999998    55444222111 000 00000000011223 37899


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+||++.
T Consensus        67 d~vi~~~   73 (218)
T 3l4b_C           67 DVVVILT   73 (218)
T ss_dssp             CEEEECC
T ss_pred             CEEEEec
Confidence            9999874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.20  E-value=0.00047  Score=61.68  Aligned_cols=68  Identities=13%  Similarity=0.219  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||+ |.+|.+++..|...|.       +|.++|++    .++++..    .+.   +  .+....+..+.++++
T Consensus       129 ~~~v~iiGa-G~~g~aia~~L~~~g~-------~V~v~~r~----~~~~~~l----~~~---~--g~~~~~~~~~~~~~a  187 (275)
T 2hk9_A          129 EKSILVLGA-GGASRAVIYALVKEGA-------KVFLWNRT----KEKAIKL----AQK---F--PLEVVNSPEEVIDKV  187 (275)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHHTC-------EEEEECSS----HHHHHHH----TTT---S--CEEECSCGGGTGGGC
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHcCC-------EEEEEECC----HHHHHHH----HHH---c--CCeeehhHHhhhcCC
Confidence            479999998 9999999999998886       79999998    4444322    211   1  133444667788999


Q ss_pred             cEEEEeCCC
Q psy9582          85 NIAILIGSF   93 (329)
Q Consensus        85 DiVi~~~g~   93 (329)
                      |+||.+...
T Consensus       188 DiVi~atp~  196 (275)
T 2hk9_A          188 QVIVNTTSV  196 (275)
T ss_dssp             SEEEECSST
T ss_pred             CEEEEeCCC
Confidence            999998543

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.20  E-value=0.00046  Score=60.86  Aligned_cols=146  Identities=12%  Similarity=0.106  Sum_probs=84.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-------ecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-------HENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-------~~~~~   78 (329)
                      ++|.|+||++.+|.+++..|++.|.       +|++.|++    +++++....+..... .+..+++-       .....
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-------~V~~~~~~----~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-------KVCFIDID----EKRSADFAKERPNLF-YFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHTTCTTEE-EEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHhcCCEE-EEEecCCCHHHHHHHHHHHH
Confidence            4799999999999999999999997       89999998    444443322221110 00001100       01123


Q ss_pred             cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCch------hhHHHH
Q psy9582          79 TAFKDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNPV------NTNTYI  142 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~  142 (329)
                      +.+..-|++|..||.....   ..+   ....+..|+.-    .+...+.+.+.   .+.||+++--.      +...|.
T Consensus        71 ~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~---~G~IInisS~~~~~~~~~~~~Y~  147 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN---KGRIINIASTRAFQSEPDSEAYA  147 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---CCcEEEEeecccccCCCCCHHHH
Confidence            4466889999998865422   122   34455666654    44555566542   35666765322      233344


Q ss_pred             HHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         143 TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       143 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ++|..               -..+.+.+|..++  | .|+.-
T Consensus       148 asKaa---------------l~~ltk~lA~ela--~-~IrVN  171 (247)
T 3ged_A          148 SAKGG---------------IVALTHALAMSLG--P-DVLVN  171 (247)
T ss_dssp             HHHHH---------------HHHHHHHHHHHHT--T-TSEEE
T ss_pred             HHHHH---------------HHHHHHHHHHHHC--C-CCEEE
Confidence            44332               1346777888886  4 56644

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.19  E-value=0.00042  Score=61.91  Aligned_cols=118  Identities=15%  Similarity=0.148  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCc--hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc--
Q psy9582           5 PVRISITGAAGQ--IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP--   77 (329)
Q Consensus         5 ~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~--   77 (329)
                      .+++.|+||+|+  +|.+++..|++.|.       +|++.|++.  ..+.++    ++........   .+++-..+.  
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~----~l~~~~~~~~~~~~Dl~~~~~v~~   92 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGA-------ELAFTYVGQ--FKDRVE----KLCAEFNPAAVLPCDVISDQEIKD   92 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTC-------EEEEEECTT--CHHHHH----HHHGGGCCSEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCC-------EEEEeeCch--HHHHHH----HHHHhcCCceEEEeecCCHHHHHH
Confidence            478999999855  99999999999987       899999982  112222    2221110000   011000111  


Q ss_pred             -----ccccCCccEEEEeCCCCCCC---C-----CC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcCc
Q psy9582          78 -----ITAFKDANIAILIGSFPRKS---N-----ME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGNP  135 (329)
Q Consensus        78 -----~~al~~aDiVi~~~g~~~~~---g-----~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tNP  135 (329)
                           .+.+..-|++|..+|.....   +     .+   ....+..|+.....+.+.+.++.. ..+.||+++-.
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~  167 (280)
T 3nrc_A           93 LFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYI  167 (280)
T ss_dssp             HHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECG
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence                 12234569999999875321   1     12   233456676655555555444321 24566666643

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.19  E-value=0.0011  Score=60.54  Aligned_cols=122  Identities=11%  Similarity=0.146  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC-----cccccchhhhHhhhhhcccCCccceEeecC---
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN-----KKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-----~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---   76 (329)
                      .+++.|+||+|++|.+++..|+..|.       +|++.|+..     ..+.++++....++.........++.-..+   
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga-------~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGA-------LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK   81 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHH
Confidence            46899999999999999999999987       899988741     011233333333333211000001100001   


Q ss_pred             ----cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q psy9582          77 ----PITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        77 ----~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tNP  135 (329)
                          ..+.+...|++|+.+|.....   ..+   ....+..|+.....    +.+.+++.  ..+.||++|-.
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~grIV~vsS~  152 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ--NYGRIIMTASA  152 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEECCh
Confidence                112245789999999875432   122   23455667665444    44445553  34677777643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.17  E-value=0.00087  Score=58.87  Aligned_cols=113  Identities=8%  Similarity=0.105  Sum_probs=65.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcc-------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI-------   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~-------   78 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .++++... ++....... ..+ -..+..       
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~-~l~~~~~~~-~~~-d~~~v~~~~~~~~   67 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-------TVACHDES----FKQKDELE-AFAETYPQL-KPM-SEQEPAELIEAVT   67 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-------EEEECCGG----GGSHHHHH-HHHHHCTTS-EEC-CCCSHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHH-HHHhcCCcE-EEE-CHHHHHHHHHHHH
Confidence            3699999999999999999999987       89999998    44443222 232211010 000 011111       


Q ss_pred             cccCCccEEEEeCCCC-C-CC--CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          79 TAFKDANIAILIGSFP-R-KS--NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~-~-~~--g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                      +.+...|++|+.+|.. . .+  ..+   ....+..|+.....    +.+.+.+.  ..+.||++|-
T Consensus        68 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS  132 (254)
T 1zmt_A           68 SAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR--KSGHIIFITS  132 (254)
T ss_dssp             HHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             HHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECC
Confidence            2234789999999875 2 11  122   23445566654444    44445443  3456777764

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.00067  Score=62.63  Aligned_cols=60  Identities=20%  Similarity=0.265  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..+|++    .+...           .    .....++.+.+++|
T Consensus       171 gktiGIIGl-G~IG~~vA~~l~~~G~-------~V~~~dr~----~~~~~-----------~----~~~~~sl~ell~~a  223 (340)
T 4dgs_A          171 GKRIGVLGL-GQIGRALASRAEAFGM-------SVRYWNRS----TLSGV-----------D----WIAHQSPVDLARDS  223 (340)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSS----CCTTS-----------C----CEECSSHHHHHHTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEcCC----ccccc-----------C----ceecCCHHHHHhcC
Confidence            479999999 9999999999998887       89999998    32210           0    11234677899999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+++.
T Consensus       224 DvVil~v  230 (340)
T 4dgs_A          224 DVLAVCV  230 (340)
T ss_dssp             SEEEECC
T ss_pred             CEEEEeC
Confidence            9999973

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=97.16  E-value=0.00057  Score=62.33  Aligned_cols=70  Identities=14%  Similarity=0.210  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +.++|+|||+ |.+|..++..|... +. .     +|.++|++    .++++..+.++..       ++....+..++++
T Consensus       134 ~~~~igiIG~-G~~g~~~a~~l~~~~g~-~-----~V~v~dr~----~~~~~~l~~~~~~-------~~~~~~~~~e~v~  195 (312)
T 2i99_A          134 SSEVLCILGA-GVQAYSHYEIFTEQFSF-K-----EVRIWNRT----KENAEKFADTVQG-------EVRVCSSVQEAVA  195 (312)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHCCC-S-----EEEEECSS----HHHHHHHHHHSSS-------CCEECSSHHHHHT
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHHhCCC-c-----EEEEEcCC----HHHHHHHHHHhhC-------CeEEeCCHHHHHh
Confidence            3579999998 99999999998875 53 2     89999998    5555433322211       2445567778899


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      ++|+|+++.
T Consensus       196 ~aDiVi~at  204 (312)
T 2i99_A          196 GADVIITVT  204 (312)
T ss_dssp             TCSEEEECC
T ss_pred             cCCEEEEEe
Confidence            999999874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=97.14  E-value=0.00042  Score=63.74  Aligned_cols=65  Identities=15%  Similarity=0.160  Sum_probs=47.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.+|..+...|.       +|..+|++    .++.+.    ....      .+... ++.+.+++|
T Consensus       155 g~~vgIIG~-G~iG~~iA~~l~~~G~-------~V~~~d~~----~~~~~~----~~~~------g~~~~-~l~e~l~~a  211 (330)
T 2gcg_A          155 QSTVGIIGL-GRIGQAIARRLKPFGV-------QRFLYTGR----QPRPEE----AAEF------QAEFV-STPELAAQS  211 (330)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGTC-------CEEEEESS----SCCHHH----HHTT------TCEEC-CHHHHHHHC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCC----CcchhH----HHhc------CceeC-CHHHHHhhC
Confidence            479999999 9999999999998886       89999998    332221    1111      12223 566788999


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |+|+++..
T Consensus       212 DvVi~~vp  219 (330)
T 2gcg_A          212 DFIVVACS  219 (330)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEeCC
Confidence            99999754

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=97.13  E-value=0.00065  Score=59.19  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA   44 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~   44 (329)
                      ...+||+|||+ |.+|.+++..|...|+       +|+.+|.
T Consensus         4 ~~~mkI~IIG~-G~~G~sLA~~L~~~G~-------~V~~~~~   37 (232)
T 3dfu_A            4 APRLRVGIFDD-GSSTVNMAEKLDSVGH-------YVTVLHA   37 (232)
T ss_dssp             CCCCEEEEECC-SCCCSCHHHHHHHTTC-------EEEECSS
T ss_pred             CCCcEEEEEee-CHHHHHHHHHHHHCCC-------EEEEecC
Confidence            34589999998 9999999999999987       8888876

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.13  E-value=0.0062  Score=48.56  Aligned_cols=99  Identities=12%  Similarity=0.137  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCC---CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           4 KPVRISITGAA---GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ++.+|+|||+|   |.+|..++..|...|+       +|+-+|.+    .+...               ......+..+.
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-------~V~~vnp~----~~~i~---------------G~~~~~s~~el   66 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGF-------EVLPVNPN----YDEIE---------------GLKCYRSVREL   66 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTC-------EEEEECTT----CSEET---------------TEECBSSGGGS
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCC-------EEEEeCCC----CCeEC---------------CeeecCCHHHh
Confidence            46899999986   8999999999998887       64444443    11111               12333444555


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK  145 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~  145 (329)
                      .+++|+++++.  |              .+.+.++++.+.+.. ..++++..+.-..-+...+.+
T Consensus        67 ~~~vDlvii~v--p--------------~~~v~~v~~~~~~~g-~~~i~~~~~~~~~~l~~~a~~  114 (138)
T 1y81_A           67 PKDVDVIVFVV--P--------------PKVGLQVAKEAVEAG-FKKLWFQPGAESEEIRRFLEK  114 (138)
T ss_dssp             CTTCCEEEECS--C--------------HHHHHHHHHHHHHTT-CCEEEECTTSCCHHHHHHHHH
T ss_pred             CCCCCEEEEEe--C--------------HHHHHHHHHHHHHcC-CCEEEEcCccHHHHHHHHHHH
Confidence            56799999972  1              145555555555543 566544443333344444433

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=97.12  E-value=0.00032  Score=63.36  Aligned_cols=88  Identities=15%  Similarity=0.259  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..||++    .+....               .....++.+.+++|
T Consensus       122 g~tvGIIGl-G~IG~~vA~~l~~~G~-------~V~~~dr~----~~~~~~---------------~~~~~~l~ell~~a  174 (290)
T 3gvx_A          122 GKALGILGY-GGIGRRVAHLAKAFGM-------RVIAYTRS----SVDQNV---------------DVISESPADLFRQS  174 (290)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTC-------EEEEECSS----CCCTTC---------------SEECSSHHHHHHHC
T ss_pred             cchheeecc-CchhHHHHHHHHhhCc-------EEEEEecc----cccccc---------------ccccCChHHHhhcc
Confidence            479999999 9999999999998887       99999998    322211               11234667889999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++... +...+.     +  |       .+.+... +|++++|+++.
T Consensus       175 DiV~l~~P~t~~t~~l-----i--~-------~~~l~~m-k~gailIN~aR  210 (290)
T 3gvx_A          175 DFVLIAIPLTDKTRGM-----V--N-------SRLLANA-RKNLTIVNVAR  210 (290)
T ss_dssp             SEEEECCCCCTTTTTC-----B--S-------HHHHTTC-CTTCEEEECSC
T ss_pred             CeEEEEeeccccchhh-----h--h-------HHHHhhh-hcCceEEEeeh
Confidence            999997432 221111     0  1       1223333 58999999974

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.11  E-value=0.00038  Score=61.31  Aligned_cols=120  Identities=11%  Similarity=0.080  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHh---CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--ccCC---ccceEeecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--IFPL---LVDVSVHEN   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~---~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--~~~~---~~~i~~~~~   76 (329)
                      .+++.|+||+|++|.+++..|++   .|.       +|++.|++    .+.++....++...  ....   ..+++-..+
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~   74 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS-------VMLVSARS----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAG   74 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-------EEEEEESC----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC-------eEEEEeCC----HHHHHHHHHHHHhhCCCCeEEEEecCCCCHHH
Confidence            35789999999999999999998   676       89999998    44444433344321  0000   000000000


Q ss_pred             cccc---c------CCcc--EEEEeCCCCCCC-----C-CC---HHHHHHHHHHHHHHHHHHHhhhcC----CCeEEEEE
Q psy9582          77 PITA---F------KDAN--IAILIGSFPRKS-----N-ME---RSELLAINSSIFIEQGKALNSVAS----RDVKVLVV  132 (329)
Q Consensus        77 ~~~a---l------~~aD--iVi~~~g~~~~~-----g-~~---~~~~~~~n~~~~~~i~~~i~~~~~----p~a~viv~  132 (329)
                      ..+.   +      ...|  ++|+.+|.....     . .+   ....+..|+.....+.+.+.+...    ..+.||++
T Consensus        75 v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~i  154 (259)
T 1oaa_A           75 VQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI  154 (259)
T ss_dssp             HHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEE
T ss_pred             HHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEE
Confidence            1111   1      1346  999998864321     1 22   334567787777777766655432    23667777


Q ss_pred             cCc
Q psy9582         133 GNP  135 (329)
Q Consensus       133 tNP  135 (329)
                      |--
T Consensus       155 sS~  157 (259)
T 1oaa_A          155 SSL  157 (259)
T ss_dssp             CCG
T ss_pred             cCc
Confidence            644

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.10  E-value=0.0014  Score=60.08  Aligned_cols=34  Identities=24%  Similarity=0.162  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEe-cC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLE-AS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D-~~   45 (329)
                      .+++.|+||+|++|.+++..|+..|.       +|++.| ++
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~-------~Vv~~~~r~   80 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGY-------AVCLHYHRS   80 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCC
Confidence            46899999999999999999999987       899999 87

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.09  E-value=0.00051  Score=63.29  Aligned_cols=64  Identities=19%  Similarity=0.262  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.+|..|...|.       +|..+|++    .+. + ...+.     .    +.. .++.+.+++|
T Consensus       150 g~~vgIIG~-G~iG~~iA~~l~~~G~-------~V~~~d~~----~~~-~-~~~~~-----g----~~~-~~l~~~l~~a  205 (334)
T 2dbq_A          150 GKTIGIIGL-GRIGQAIAKRAKGFNM-------RILYYSRT----RKE-E-VEREL-----N----AEF-KPLEDLLRES  205 (334)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCH-H-HHHHH-----C----CEE-CCHHHHHHHC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCC-------EEEEECCC----cch-h-hHhhc-----C----ccc-CCHHHHHhhC
Confidence            479999998 9999999999998886       89999998    332 1 11111     1    122 3566788999


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |+|+++..
T Consensus       206 DvVil~vp  213 (334)
T 2dbq_A          206 DFVVLAVP  213 (334)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.08  E-value=0.0025  Score=56.07  Aligned_cols=149  Identities=16%  Similarity=0.129  Sum_probs=83.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEeecCcccc-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVHENPITA-   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~~~~~~a-   80 (329)
                      .+.+.|+||++.+|.+++..|++.|.       .|++.|++.   .+..   ...+......   +..+++-..+..+. 
T Consensus         9 GKvalVTGas~GIG~aiA~~la~~Ga-------~Vvi~~r~~---~~~~---~~~~~~~g~~~~~~~~Dv~d~~~v~~~~   75 (247)
T 4hp8_A            9 GRKALVTGANTGLGQAIAVGLAAAGA-------EVVCAARRA---PDET---LDIIAKDGGNASALLIDFADPLAAKDSF   75 (247)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC---CHHH---HHHHHHTTCCEEEEECCTTSTTTTTTSS
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHcCC-------EEEEEeCCc---HHHH---HHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            35777889999999999999999997       899999982   1111   1122211100   00011100111111 


Q ss_pred             -cCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHH
Q psy9582          81 -FKDANIAILIGSFPRK-S--NM---ERSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTYIT  143 (329)
Q Consensus        81 -l~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~  143 (329)
                       ...-|++|..||.... +  ..   ++...+..|+.    ..+..++.|.+.. ..+.||+++--.      ....|.+
T Consensus        76 ~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g-~~G~IVnisS~~~~~g~~~~~~Y~a  154 (247)
T 4hp8_A           76 TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG-RSGKVVNIASLLSFQGGIRVPSYTA  154 (247)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CCcEEEEEechhhCCCCCCChHHHH
Confidence             2356999999887542 2  12   24455666765    4455566666553 467788886322      2334444


Q ss_pred             HHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         144 MKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       144 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +|..       +        ..+.+.+|.+++  |..|+.-
T Consensus       155 sKaa-------v--------~~ltr~lA~Ela--~~gIrVN  178 (247)
T 4hp8_A          155 AKHG-------V--------AGLTKLLANEWA--AKGINVN  178 (247)
T ss_dssp             HHHH-------H--------HHHHHHHHHHHG--GGTEEEE
T ss_pred             HHHH-------H--------HHHHHHHHHHHh--hcCeEEE
Confidence            4432       1        235667777765  5567654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.08  E-value=0.0025  Score=55.25  Aligned_cols=111  Identities=11%  Similarity=0.163  Sum_probs=64.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh------HhhhhhcccCCccceE-eecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV------IMEIEDCIFPLLVDVS-VHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~------~~dl~~~~~~~~~~i~-~~~~~~   78 (329)
                      +++.|+||+|++|.+++..|++.|.       +|++.|++    .+++...      ..|+.+ .     .+. ......
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~D~~~-~-----~~~~~~~~~~   65 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGY-------RVAIASRN----PEEAAQSLGAVPLPTDLEK-D-----DPKGLVKRAL   65 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----CHHHHHHHTCEEEECCTTT-S-----CHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHhhCcEEEecCCch-H-----HHHHHHHHHH
Confidence            5799999999999999999999987       89999998    3322111      011111 0     000 000111


Q ss_pred             cccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 TAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +.+.+.|++|+.+|.... +  ..+   ....+..|+...    +.+.+.+.+.  ..+.||+++-.
T Consensus        66 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~g~iv~isS~  130 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA--GWGRVLFIGSV  130 (239)
T ss_dssp             HHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCG
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECch
Confidence            234578999999886432 1  122   334455565544    4444445543  34677777643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.05  E-value=0.0022  Score=58.43  Aligned_cols=123  Identities=16%  Similarity=0.135  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc--------cccchhhhHhhhhhcccCCc---cceEe
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK--------SQKAIKGVIMEIEDCIFPLL---VDVSV   73 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--------~~~~~~~~~~dl~~~~~~~~---~~i~~   73 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|+++|++...        ..+.++.....+........   .+++-
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~-------~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d  118 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGA-------DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD  118 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            46889999999999999999999987       89999986210        01122222222221110000   01100


Q ss_pred             ecCcc-------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcCc
Q psy9582          74 HENPI-------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        74 ~~~~~-------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ..+..       +.+...|++|..||.....   ..+   ....+..|+....    .+.+.+.+.. ..+.||+++-.
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~g~Iv~isS~  196 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERG-QGGSVIFVSST  196 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC-SCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCCEEEEECcH
Confidence            01111       1234789999999865321   122   3345566665444    4445555442 45777777643

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.03  E-value=0.0008  Score=61.42  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+.|+||+|++|.+++..|++.|.       +|++.|++
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~-------~Vv~~~r~   60 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIG   60 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCc
Confidence            46789999999999999999999987       89999986

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=97.00  E-value=0.00096  Score=61.44  Aligned_cols=70  Identities=20%  Similarity=0.225  Sum_probs=48.0

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |++++||+|||+ |.+|..++..|...+-+      +|+ ++|++    .++++..+..+         .+...++..+.
T Consensus         1 M~~~~rvgiiG~-G~~g~~~~~~l~~~~~~------~l~av~d~~----~~~~~~~a~~~---------g~~~~~~~~~~   60 (344)
T 3euw_A            1 MSLTLRIALFGA-GRIGHVHAANIAANPDL------ELVVIADPF----IEGAQRLAEAN---------GAEAVASPDEV   60 (344)
T ss_dssp             --CCEEEEEECC-SHHHHHHHHHHHHCTTE------EEEEEECSS----HHHHHHHHHTT---------TCEEESSHHHH
T ss_pred             CCCceEEEEECC-cHHHHHHHHHHHhCCCc------EEEEEECCC----HHHHHHHHHHc---------CCceeCCHHHH
Confidence            455689999998 99999999988875322      555 88998    54444322211         13455677777


Q ss_pred             cC--CccEEEEeC
Q psy9582          81 FK--DANIAILIG   91 (329)
Q Consensus        81 l~--~aDiVi~~~   91 (329)
                      ++  ++|+|+++.
T Consensus        61 l~~~~~D~V~i~t   73 (344)
T 3euw_A           61 FARDDIDGIVIGS   73 (344)
T ss_dssp             TTCSCCCEEEECS
T ss_pred             hcCCCCCEEEEeC
Confidence            77  899999973

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.00  E-value=0.00056  Score=60.17  Aligned_cols=117  Identities=15%  Similarity=0.155  Sum_probs=63.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------c
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------I   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------~   78 (329)
                      +++.|+||+|++|.+++..|++.|.--     .|++.+++    .+.++....++.........+++-..+.       .
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~-----~v~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDT-----VVYGVARS----EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAV   73 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSC-----EEEEEESC----HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCe-----EEEEecCC----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence            479999999999999999999865211     78889888    4444433322211100000011000111       1


Q ss_pred             cccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          79 TAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                      +.+...|++|+.+|...  .+  ..+   ....+..|+.....+    .+.+++.  . +.||+++-
T Consensus        74 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~-g~iv~isS  137 (254)
T 3kzv_A           74 KGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--N-GNVVFVSS  137 (254)
T ss_dssp             HHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECC
T ss_pred             HhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--C-CeEEEEcC
Confidence            22347899999998642  21  122   233455666544444    4444553  2 56666653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.98  E-value=0.00051  Score=60.59  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.|++
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~   38 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGA-------TVYITGRH   38 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            46899999999999999999999987       89999998

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.97  E-value=0.00081  Score=60.43  Aligned_cols=78  Identities=10%  Similarity=0.130  Sum_probs=53.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~al   81 (329)
                      .+++.|+||+|.+|.+++..|+..|.       +|+++|++    .++++..+.++.... .. .....++  .+..+.+
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~G~-------~V~i~~R~----~~~~~~l~~~~~~~~-~~~~~~~D~~~~~~~~~~~  186 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGEGA-------EVVLCGRK----LDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV  186 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEECC----HHHHHHHHHHHHhcC-CcEEEEecCCCHHHHHHHH
Confidence            46899999889999999999999987       89999998    555554444443210 11 1111221  1234667


Q ss_pred             CCccEEEEeCCCC
Q psy9582          82 KDANIAILIGSFP   94 (329)
Q Consensus        82 ~~aDiVi~~~g~~   94 (329)
                      +++|+||.+++..
T Consensus       187 ~~~DvlVn~ag~g  199 (287)
T 1lu9_A          187 KGAHFVFTAGAIG  199 (287)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             HhCCEEEECCCcc
Confidence            8899999998753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.97  E-value=0.0015  Score=57.75  Aligned_cols=121  Identities=12%  Similarity=0.080  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPIT--   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~--   79 (329)
                      .+++.|+||+|++|.+++..|++.|.       +|++.+...   .+.++....++........   .+++-..+..+  
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~-------~v~i~~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~   95 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGF-------NIGVHYHRD---AAGAQETLNAIVANGGNGRLLSFDVANREQCREVL   95 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc---hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            35899999999999999999999987       786655441   3334333333332210000   01100011111  


Q ss_pred             -----ccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHH----HHhhhcCCCeEEEEEcCch
Q psy9582          80 -----AFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGK----ALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        80 -----al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~----~i~~~~~p~a~viv~tNP~  136 (329)
                           .+...|++|..+|......   .+   ....+..|+.....+.+    .+.+. ...+.||+++-..
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~g~iv~isS~~  166 (267)
T 4iiu_A           96 EHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA-RQGGRIITLSSVS  166 (267)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSCEEEEEECCHH
T ss_pred             HHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCcEEEEEcchH
Confidence                 2337899999988754221   12   33455667655444444    33323 2567788877543

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.97  E-value=0.0019  Score=57.68  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=47.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEE-EecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQL-LEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L-~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ++||+|+||+|.+|+.++..+....-+      +|+- +|++    .....+  .|+.... .....+.++.++.+.+++
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~------eLv~~~d~~----~~~~~G--~d~gel~-g~~~gv~v~~dl~~ll~~   73 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDA------TLVGALDRT----GSPQLG--QDAGAFL-GKQTGVALTDDIERVCAE   73 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTE------EEEEEBCCT----TCTTTT--SBTTTTT-TCCCSCBCBCCHHHHHHH
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEEec----Cccccc--ccHHHHh-CCCCCceecCCHHHHhcC
Confidence            479999998899999999988875432      5554 6776    221122  1222211 111245566777777889


Q ss_pred             ccEEEEe
Q psy9582          84 ANIAILI   90 (329)
Q Consensus        84 aDiVi~~   90 (329)
                      +|+||..
T Consensus        74 ~DVVIDf   80 (272)
T 4f3y_A           74 ADYLIDF   80 (272)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEc
Confidence            9999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.96  E-value=0.0011  Score=58.30  Aligned_cols=141  Identities=16%  Similarity=0.179  Sum_probs=84.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh--------HhhhhhcccCCccceEeecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV--------IMEIEDCIFPLLVDVSVHEN   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~--------~~dl~~~~~~~~~~i~~~~~   76 (329)
                      .+.+.|+||++.+|.+++..|++.|.       +|++.|++    .+.++..        ..|+.+..     .+   ..
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga-------~Vv~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~-----~v---~~   71 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGA-------EVVALGLD----ADGVHAPRHPRIRREELDITDSQ-----RL---QR   71 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----TTSTTSCCCTTEEEEECCTTCHH-----HH---HH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHhhhhcCCeEEEEecCCCHH-----HH---HH
Confidence            46889999999999999999999998       89999998    3333211        11221110     01   12


Q ss_pred             cccccCCccEEEEeCCCCCCC-CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCch------hhHHHH
Q psy9582          77 PITAFKDANIAILIGSFPRKS-NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNPV------NTNTYI  142 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~-g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~  142 (329)
                      ..+.+..-|++|..||..+.. ..+   +...+..|+.-    .+...+.+++.   .+.||+++--.      +...|.
T Consensus        72 ~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~---~G~IVnisS~~~~~~~~~~~~Y~  148 (242)
T 4b79_A           72 LFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR---GGSILNIASMYSTFGSADRPAYS  148 (242)
T ss_dssp             HHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---CEEEEEECCGGGTSCCSSCHHHH
T ss_pred             HHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCeEEEEeeccccCCCCCCHHHH
Confidence            345677889999999875421 122   33455566553    34445555542   46777876322      233344


Q ss_pred             HHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         143 TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       143 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ++|..               -..+.+.+|..++  |..|+.-
T Consensus       149 asKaa---------------v~~ltr~lA~Ela--~~gIrVN  173 (242)
T 4b79_A          149 ASKGA---------------IVQLTRSLACEYA--AERIRVN  173 (242)
T ss_dssp             HHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HHHHH---------------HHHHHHHHHHHhh--hcCeEEE
Confidence            44432               1235667777765  5667654

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=96.96  E-value=0.0013  Score=63.15  Aligned_cols=67  Identities=9%  Similarity=0.108  Sum_probs=43.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC------CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCcc-ceEeecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG------DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLV-DVSVHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~------~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~-~i~~~~~~~   78 (329)
                      +||+|||. |.+|.++|..|...      |+       +|++.+..    ..+....+.+.     .... .- ...+..
T Consensus        55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~-------~ViVg~r~----~sks~e~A~e~-----G~~v~d~-ta~s~a  116 (525)
T 3fr7_A           55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKIGLRK----GSKSFDEARAA-----GFTEESG-TLGDIW  116 (525)
T ss_dssp             SEEEEECC-TTHHHHHHHHHHHHHHHTTCCC-------EEEEEECT----TCSCHHHHHHT-----TCCTTTT-CEEEHH
T ss_pred             CEEEEEeE-hHHHHHHHHHHHhcccccCCCC-------EEEEEeCC----chhhHHHHHHC-----CCEEecC-CCCCHH
Confidence            69999998 99999999999988      76       67766665    22222121111     1100 00 012457


Q ss_pred             cccCCccEEEEe
Q psy9582          79 TAFKDANIAILI   90 (329)
Q Consensus        79 ~al~~aDiVi~~   90 (329)
                      +++++||+||++
T Consensus       117 EAa~~ADVVILa  128 (525)
T 3fr7_A          117 ETVSGSDLVLLL  128 (525)
T ss_dssp             HHHHHCSEEEEC
T ss_pred             HHHhcCCEEEEC
Confidence            899999999997

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.96  E-value=0.0008  Score=62.38  Aligned_cols=65  Identities=8%  Similarity=0.021  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .++|+|||. |.||+.+|..+. ..|.       +|..+|++    .+..+. ..++         .+....++.+.+++
T Consensus       163 g~~vgIIG~-G~IG~~vA~~l~~~~G~-------~V~~~d~~----~~~~~~-~~~~---------g~~~~~~l~ell~~  220 (348)
T 2w2k_A          163 GHVLGAVGL-GAIQKEIARKAVHGLGM-------KLVYYDVA----PADAET-EKAL---------GAERVDSLEELARR  220 (348)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCC-------EEEEECSS----CCCHHH-HHHH---------TCEECSSHHHHHHH
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhcCC-------EEEEECCC----Ccchhh-Hhhc---------CcEEeCCHHHHhcc
Confidence            479999998 999999999998 7776       89999998    332221 1111         12223456678899


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|+++.
T Consensus       221 aDvVil~v  228 (348)
T 2w2k_A          221 SDCVSVSV  228 (348)
T ss_dssp             CSEEEECC
T ss_pred             CCEEEEeC
Confidence            99999974

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=96.92  E-value=0.0019  Score=59.81  Aligned_cols=75  Identities=9%  Similarity=0.138  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +..+|+|||+ |.+|..++..|.. .+. .     +|.++|++    .++++..+.++...  . ...+....+..++++
T Consensus       128 ~~~~v~iIGa-G~~a~~~a~al~~~~~~-~-----~V~V~~r~----~~~a~~la~~~~~~--~-g~~~~~~~~~~eav~  193 (350)
T 1x7d_A          128 NARKMALIGN-GAQSEFQALAFHKHLGI-E-----EIVAYDTD----PLATAKLIANLKEY--S-GLTIRRASSVAEAVK  193 (350)
T ss_dssp             TCCEEEEECC-STTHHHHHHHHHHHSCC-C-----EEEEECSS----HHHHHHHHHHHTTC--T-TCEEEECSSHHHHHT
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHhCCC-c-----EEEEEcCC----HHHHHHHHHHHHhc--c-CceEEEeCCHHHHHh
Confidence            3579999998 9999998887754 333 2     89999999    66666555444321  0 112455567788999


Q ss_pred             CccEEEEeCC
Q psy9582          83 DANIAILIGS   92 (329)
Q Consensus        83 ~aDiVi~~~g   92 (329)
                      +||+||++..
T Consensus       194 ~aDiVi~aTp  203 (350)
T 1x7d_A          194 GVDIITTVTA  203 (350)
T ss_dssp             TCSEEEECCC
T ss_pred             cCCEEEEecc
Confidence            9999999743

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.88  E-value=0.0028  Score=60.11  Aligned_cols=102  Identities=10%  Similarity=-0.012  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..++|+|+|. |.+|..+|..|...|.       +|..+|++    ..+.. .+   ...  .    +.. .++.+++++
T Consensus       210 ~GktVgIiG~-G~IG~~vA~~Lka~Ga-------~Viv~D~~----p~~a~-~A---~~~--G----~~~-~sL~eal~~  266 (436)
T 3h9u_A          210 AGKTACVCGY-GDVGKGCAAALRGFGA-------RVVVTEVD----PINAL-QA---AME--G----YQV-LLVEDVVEE  266 (436)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHH-HH---HHT--T----CEE-CCHHHHTTT
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCC-------EEEEECCC----hhhhH-HH---HHh--C----Cee-cCHHHHHhh
Confidence            3579999998 9999999999998886       89999998    32221 11   111  1    112 357889999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch-hhHHHHHHHH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV-NTNTYITMKS  146 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~-~~~~~~~~~~  146 (329)
                      ||+|+.+.+...--+                 .+.+... +++++|++++++. .+-...+.+.
T Consensus       267 ADVVilt~gt~~iI~-----------------~e~l~~M-K~gAIVINvgRg~vEID~~~L~~~  312 (436)
T 3h9u_A          267 AHIFVTTTGNDDIIT-----------------SEHFPRM-RDDAIVCNIGHFDTEIQVAWLKAN  312 (436)
T ss_dssp             CSEEEECSSCSCSBC-----------------TTTGGGC-CTTEEEEECSSSGGGBCHHHHHHH
T ss_pred             CCEEEECCCCcCccC-----------------HHHHhhc-CCCcEEEEeCCCCCccCHHHHHhh
Confidence            999998654322111                 0123333 5899999999864 3444444443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.87  E-value=0.0016  Score=58.46  Aligned_cols=120  Identities=16%  Similarity=0.186  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--C---ccceEeec----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--L---LVDVSVHE----   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~---~~~i~~~~----   75 (329)
                      .+++.|+||+|++|.+++..|++.|.-.    ..|++.|++    .+.++....++......  .   ..+++-..    
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~----~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~  104 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGD----MKLILAARR----LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKP  104 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTC----SEEEEEESC----HHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHH
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCC----ceEEEEECC----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence            4689999999999999999998765411    179999998    55555444444321100  0   00110001    


Q ss_pred             ---CcccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582          76 ---NPITAFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ---~~~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN  134 (329)
                         ...+.+...|++|..||....  +  ..+   ....+..|+.....+    .+.+++.  ..+.||+++-
T Consensus       105 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~IV~isS  175 (287)
T 3rku_A          105 FIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK--NSGDIVNLGS  175 (287)
T ss_dssp             HHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEECC
Confidence               112234478999999986431  1  122   334556666654444    4444553  3456777764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.85  E-value=0.002  Score=56.79  Aligned_cols=119  Identities=13%  Similarity=0.136  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccC---CccceEeecC-
Q psy9582           4 KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFP---LLVDVSVHEN-   76 (329)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~---~~~~i~~~~~-   76 (329)
                      +.+++.|+||+  |++|.+++..|++.|.       .|++++++.   .+..+....++... ...   ...+++-..+ 
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   88 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-------AVAITYASR---AQGAEENVKELEKTYGIKAKAYKCQVDSYESC   88 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC-------EEEECBSSS---SSHHHHHHHHHHHHHCCCEECCBCCTTCHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEeCCc---chhHHHHHHHHHHhcCCceeEEecCCCCHHHH
Confidence            34689999998  8999999999999987       899999882   11112233333221 000   0011111111 


Q ss_pred             ------cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcC
Q psy9582          77 ------PITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        77 ------~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tN  134 (329)
                            ..+.+...|++|+.+|.....   ..+   ....+..|+....    .+.+.+.+.  ..+.||+++-
T Consensus        89 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS  160 (267)
T 3gdg_A           89 EKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER--GTGSLVITAS  160 (267)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc--CCceEEEEcc
Confidence                  112234679999999865422   122   2344556655444    444455554  3456666654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.82  E-value=0.0034  Score=62.54  Aligned_cols=121  Identities=14%  Similarity=0.094  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC-----cccccchhhhHhhhhhcccCCccceEeec----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN-----KKSQKAIKGVIMEIEDCIFPLLVDVSVHE----   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-----~~~~~~~~~~~~dl~~~~~~~~~~i~~~~----   75 (329)
                      .+.+.|+||+|++|.++|..|++.|.       +|++.|+..     ..+.+.++..+.++.........++.-..    
T Consensus        19 gk~~lVTGas~GIG~aiA~~La~~Ga-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~   91 (613)
T 3oml_A           19 GRVAVVTGAGAGLGREYALLFAERGA-------KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAK   91 (613)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHH
Confidence            46788999999999999999999987       899998820     00134444444444332111000110001    


Q ss_pred             ---CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582          76 ---NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        76 ---~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN  134 (329)
                         ...+.+...|++|..||.....   ..+   ....+..|+.....    +.+.|++.  ..+.||++|-
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~--~~g~IV~isS  161 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ--NYGRIIMTSS  161 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCEEEEEECC
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECC
Confidence               1122334679999999875422   223   33445666664444    44455553  3567777763

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.81  E-value=0.0016  Score=60.21  Aligned_cols=67  Identities=22%  Similarity=0.336  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      +++||+|||+ |.+|..++..|... +-+      +|+ ++|++    .++++..+...         .+...++..+.+
T Consensus        12 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~------~lvav~d~~----~~~~~~~~~~~---------~~~~~~~~~~ll   71 (354)
T 3q2i_A           12 RKIRFALVGC-GRIANNHFGALEKHADRA------ELIDVCDID----PAALKAAVERT---------GARGHASLTDML   71 (354)
T ss_dssp             SCEEEEEECC-STTHHHHHHHHHHTTTTE------EEEEEECSS----HHHHHHHHHHH---------CCEEESCHHHHH
T ss_pred             CcceEEEEcC-cHHHHHHHHHHHhCCCCe------EEEEEEcCC----HHHHHHHHHHc---------CCceeCCHHHHh
Confidence            4689999999 99999999888876 222      554 88998    55444322211         134556766666


Q ss_pred             C--CccEEEEe
Q psy9582          82 K--DANIAILI   90 (329)
Q Consensus        82 ~--~aDiVi~~   90 (329)
                      +  ++|+|+++
T Consensus        72 ~~~~~D~V~i~   82 (354)
T 3q2i_A           72 AQTDADIVILT   82 (354)
T ss_dssp             HHCCCSEEEEC
T ss_pred             cCCCCCEEEEC
Confidence            5  89999997

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.80  E-value=0.0024  Score=60.42  Aligned_cols=92  Identities=12%  Similarity=0.113  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ...+|+|+|. |.+|..+|..|...|.       +|..+|++    ..+.. .+.  .+   .    +.. .++.+++++
T Consensus       219 ~GktV~ViG~-G~IGk~vA~~Lra~Ga-------~Viv~D~d----p~ra~-~A~--~~---G----~~v-~~Leeal~~  275 (435)
T 3gvp_A          219 GGKQVVVCGY-GEVGKGCCAALKAMGS-------IVYVTEID----PICAL-QAC--MD---G----FRL-VKLNEVIRQ  275 (435)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHH-HHH--HT---T----CEE-CCHHHHTTT
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCC-------EEEEEeCC----hhhhH-HHH--Hc---C----CEe-ccHHHHHhc
Confidence            4579999999 9999999999998887       89999998    32221 111  01   1    111 346789999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ||+|+.+.|.+.-  .+            .   +.+... ++++++++++.+-
T Consensus       276 ADIVi~atgt~~l--I~------------~---e~l~~M-K~gailINvgrg~  310 (435)
T 3gvp_A          276 VDIVITCTGNKNV--VT------------R---EHLDRM-KNSCIVCNMGHSN  310 (435)
T ss_dssp             CSEEEECSSCSCS--BC------------H---HHHHHS-CTTEEEEECSSTT
T ss_pred             CCEEEECCCCccc--CC------------H---HHHHhc-CCCcEEEEecCCC
Confidence            9999997443220  01            1   223333 4789999998763

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.80  E-value=0.0015  Score=57.58  Aligned_cols=33  Identities=30%  Similarity=0.471  Sum_probs=30.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|+|+ |.+|+.++..|+..|. +     +|+++|.+
T Consensus        32 ~~VlVvG~-Gg~G~~va~~La~~Gv-~-----~i~lvD~d   64 (249)
T 1jw9_B           32 SRVLIVGL-GGLGCAASQYLASAGV-G-----NLTLLDFD   64 (249)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-S-----EEEEECCC
T ss_pred             CeEEEEee-CHHHHHHHHHHHHcCC-C-----eEEEEcCC
Confidence            68999998 9999999999999886 3     89999998

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.78  E-value=0.0018  Score=59.94  Aligned_cols=93  Identities=16%  Similarity=0.197  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..+|++    ....+ ...++         .+....++.+.+++|
T Consensus       164 gktvGIIG~-G~IG~~vA~~l~~~G~-------~V~~~dr~----~~~~~-~~~~~---------g~~~~~~l~ell~~a  221 (351)
T 3jtm_A          164 GKTIGTVGA-GRIGKLLLQRLKPFGC-------NLLYHDRL----QMAPE-LEKET---------GAKFVEDLNEMLPKC  221 (351)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGCC-------EEEEECSS----CCCHH-HHHHH---------CCEECSCHHHHGGGC
T ss_pred             CCEEeEEEe-CHHHHHHHHHHHHCCC-------EEEEeCCC----ccCHH-HHHhC---------CCeEcCCHHHHHhcC
Confidence            479999999 9999999999998887       89999987    22221 11111         122234678899999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++... +...+.     +  |    .   +.+... +|++++|+++.
T Consensus       222 DvV~l~~Plt~~t~~l-----i--~----~---~~l~~m-k~gailIN~aR  257 (351)
T 3jtm_A          222 DVIVINMPLTEKTRGM-----F--N----K---ELIGKL-KKGVLIVNNAR  257 (351)
T ss_dssp             SEEEECSCCCTTTTTC-----B--S----H---HHHHHS-CTTEEEEECSC
T ss_pred             CEEEECCCCCHHHHHh-----h--c----H---HHHhcC-CCCCEEEECcC
Confidence            999997432 221111     0  1    1   223333 58999999984

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.77  E-value=0.00097  Score=60.92  Aligned_cols=91  Identities=18%  Similarity=0.251  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..||++    .+...+    +.        ......++.+.+++|
T Consensus       139 g~tvGIiG~-G~IG~~vA~~l~~~G~-------~V~~~dr~----~~~~~~----~~--------~~~~~~~l~ell~~a  194 (315)
T 3pp8_A          139 EFSVGIMGA-GVLGAKVAESLQAWGF-------PLRCWSRS----RKSWPG----VE--------SYVGREELRAFLNQT  194 (315)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTC-------CEEEEESS----CCCCTT----CE--------EEESHHHHHHHHHTC
T ss_pred             CCEEEEEee-CHHHHHHHHHHHHCCC-------EEEEEcCC----chhhhh----hh--------hhcccCCHHHHHhhC
Confidence            479999999 9999999999998887       89999998    332221    10        011113567889999


Q ss_pred             cEEEEeCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFP-RKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~-~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.... ...+.     +  |       .+.+... +|++++|+++.
T Consensus       195 DiV~l~~Plt~~t~~l-----i--~-------~~~l~~m-k~gailIN~aR  230 (315)
T 3pp8_A          195 RVLINLLPNTAQTVGI-----I--N-------SELLDQL-PDGAYVLNLAR  230 (315)
T ss_dssp             SEEEECCCCCGGGTTC-----B--S-------HHHHTTS-CTTEEEEECSC
T ss_pred             CEEEEecCCchhhhhh-----c--c-------HHHHhhC-CCCCEEEECCC
Confidence            9999974321 11110     0  1       1233443 58999999984

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.75  E-value=0.0011  Score=59.42  Aligned_cols=74  Identities=20%  Similarity=0.267  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT   79 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~   79 (329)
                      .+++||+|+|++|.+|+.++..+... ++       +|+ ++|.+    .+...+  .|+.... .. ...+.++++..+
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~-------elva~~d~~----~~~~~g--~d~~~~~-g~~~~~v~~~~dl~~   68 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGV-------QLGAALERE----GSSLLG--SDAGELA-GAGKTGVTVQSSLDA   68 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTE-------ECCCEECCT----TCTTCS--CCTTCSS-SSSCCSCCEESCSTT
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCC-------EEEEEEecC----chhhhh--hhHHHHc-CCCcCCceecCCHHH
Confidence            35689999999999999999988754 43       666 88887    222211  1222111 11 123455677777


Q ss_pred             ccCCccEEEEe
Q psy9582          80 AFKDANIAILI   90 (329)
Q Consensus        80 al~~aDiVi~~   90 (329)
                      .++++|+||..
T Consensus        69 ~l~~~DvVIDf   79 (273)
T 1dih_A           69 VKDDFDVFIDF   79 (273)
T ss_dssp             TTTSCSEEEEC
T ss_pred             HhcCCCEEEEc
Confidence            88899999943

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=96.73  E-value=0.0032  Score=57.64  Aligned_cols=72  Identities=15%  Similarity=0.154  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +..+|+|||+ |.+|..++..|....-+.     +|.++|++    .++++..+.++...  .  ..+. ..+..+++ +
T Consensus       124 ~~~~v~iIGa-G~~a~~~~~al~~~~~~~-----~V~v~~r~----~~~a~~la~~~~~~--~--~~~~-~~~~~e~v-~  187 (322)
T 1omo_A          124 NSSVFGFIGC-GTQAYFQLEALRRVFDIG-----EVKAYDVR----EKAAKKFVSYCEDR--G--ISAS-VQPAEEAS-R  187 (322)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHSCCC-----EEEEECSS----HHHHHHHHHHHHHT--T--CCEE-ECCHHHHT-S
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHhCCcc-----EEEEECCC----HHHHHHHHHHHHhc--C--ceEE-ECCHHHHh-C
Confidence            3579999998 999999998887632223     89999999    66666555444321  0  1244 56677888 9


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      +|+|+++.
T Consensus       188 aDvVi~aT  195 (322)
T 1omo_A          188 CDVLVTTT  195 (322)
T ss_dssp             SSEEEECC
T ss_pred             CCEEEEee
Confidence            99999974

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.73  E-value=0.0062  Score=48.96  Aligned_cols=60  Identities=8%  Similarity=0.114  Sum_probs=40.3

Q ss_pred             CCEEEEEcCC---CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc--cchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           5 PVRISITGAA---GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ--KAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~--~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      +.+|+|||++   |.+|..++..|...|+       +|+.+|..    .  +.+.               .+.+..+..+
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~-------~v~~vnp~----~~g~~i~---------------G~~~~~sl~e   66 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGY-------HVIPVSPK----VAGKTLL---------------GQQGYATLAD   66 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTC-------CEEEECSS----STTSEET---------------TEECCSSTTT
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCC-------EEEEeCCc----ccccccC---------------CeeccCCHHH
Confidence            5789999997   7899999999998886       65555444    1  1111               1223333444


Q ss_pred             ccCCccEEEEe
Q psy9582          80 AFKDANIAILI   90 (329)
Q Consensus        80 al~~aDiVi~~   90 (329)
                      ...++|+++++
T Consensus        67 l~~~~Dlvii~   77 (145)
T 2duw_A           67 VPEKVDMVDVF   77 (145)
T ss_dssp             CSSCCSEEECC
T ss_pred             cCCCCCEEEEE
Confidence            45678999997

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.66  E-value=0.0015  Score=60.36  Aligned_cols=70  Identities=13%  Similarity=0.156  Sum_probs=46.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |++++||+|||+ |.+|..++..|...+-+      +|+ ++|++    .++++..+...   .      +...++..+.
T Consensus         2 M~~~~~vgiiG~-G~~g~~~~~~l~~~~~~------~lvav~d~~----~~~~~~~~~~~---g------~~~~~~~~~~   61 (354)
T 3db2_A            2 MYNPVGVAAIGL-GRWAYVMADAYTKSEKL------KLVTCYSRT----EDKREKFGKRY---N------CAGDATMEAL   61 (354)
T ss_dssp             CCCCEEEEEECC-SHHHHHHHHHHTTCSSE------EEEEEECSS----HHHHHHHHHHH---T------CCCCSSHHHH
T ss_pred             CCCcceEEEEcc-CHHHHHHHHHHHhCCCc------EEEEEECCC----HHHHHHHHHHc---C------CCCcCCHHHH
Confidence            345589999998 99999999888765322      654 88998    55444332221   1      1123566667


Q ss_pred             c--CCccEEEEeC
Q psy9582          81 F--KDANIAILIG   91 (329)
Q Consensus        81 l--~~aDiVi~~~   91 (329)
                      +  .+.|+|+++.
T Consensus        62 l~~~~~D~V~i~t   74 (354)
T 3db2_A           62 LAREDVEMVIITV   74 (354)
T ss_dssp             HHCSSCCEEEECS
T ss_pred             hcCCCCCEEEEeC
Confidence            7  6799999973

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.64  E-value=0.0023  Score=57.95  Aligned_cols=76  Identities=16%  Similarity=0.121  Sum_probs=52.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++++|+|+ |.+|.+++..|...|..      +|+++|++    .++++..+.++...   . ..+....+..++++++
T Consensus       141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~------~V~v~nR~----~~ka~~la~~~~~~---~-~~~~~~~~~~~~~~~a  205 (297)
T 2egg_A          141 GKRILVIGA-GGGARGIYFSLLSTAAE------RIDMANRT----VEKAERLVREGDER---R-SAYFSLAEAETRLAEY  205 (297)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCS------EEEEECSS----HHHHHHHHHHSCSS---S-CCEECHHHHHHTGGGC
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHCCCC------EEEEEeCC----HHHHHHHHHHhhhc---c-CceeeHHHHHhhhccC
Confidence            478999998 99999999999988752      89999998    55555444333210   0 0111112345678899


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.+.+.
T Consensus       206 DivIn~t~~~~  216 (297)
T 2egg_A          206 DIIINTTSVGM  216 (297)
T ss_dssp             SEEEECSCTTC
T ss_pred             CEEEECCCCCC
Confidence            99999866543

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.64  E-value=0.002  Score=59.09  Aligned_cols=91  Identities=12%  Similarity=0.229  Sum_probs=59.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..||++    .+..+.    +.        ......++.+.+++|
T Consensus       137 gktvGIiGl-G~IG~~vA~~l~~~G~-------~V~~~dr~----~~~~~~----~~--------~~~~~~~l~ell~~a  192 (324)
T 3evt_A          137 GQQLLIYGT-GQIGQSLAAKASALGM-------HVIGVNTT----GHPADH----FH--------ETVAFTATADALATA  192 (324)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS----CCCCTT----CS--------EEEEGGGCHHHHHHC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC-------EEEEECCC----cchhHh----Hh--------hccccCCHHHHHhhC
Confidence            479999999 9999999999998887       89999998    322221    00        111124567889999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++... +...+.     +  |       .+.+... +|++++|+++-
T Consensus       193 DvV~l~lPlt~~t~~l-----i--~-------~~~l~~m-k~gailIN~aR  228 (324)
T 3evt_A          193 NFIVNALPLTPTTHHL-----F--S-------TELFQQT-KQQPMLINIGR  228 (324)
T ss_dssp             SEEEECCCCCGGGTTC-----B--S-------HHHHHTC-CSCCEEEECSC
T ss_pred             CEEEEcCCCchHHHHh-----c--C-------HHHHhcC-CCCCEEEEcCC
Confidence            999997432 111111     0  1       1233443 58899999984

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.63  E-value=0.0032  Score=60.98  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
                      ...++.|+||+|++|..++..|+..|.-      .|++++++... ...++....++.......   ..++.-..+..+.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~------~vvl~~R~~~~-~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~  297 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAP------HLLLVSRSGPD-ADGAGELVAELEALGARTTVAACDVTDRESVREL  297 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCS------EEEEEESSGGG-STTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCC------EEEEEcCCCCC-cHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHH
Confidence            3478999999999999999999988762      49999998211 112222233333211000   0011000112223


Q ss_pred             cCC------ccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          81 FKD------ANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 l~~------aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++.      .|.||+++|.....   ..+.   ...+..|+.....+.+.+.+.  +...||++|
T Consensus       298 ~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~S  360 (486)
T 2fr1_A          298 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFS  360 (486)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEE
T ss_pred             HHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEc
Confidence            333      49999999875422   1232   234567888888888888765  334555554

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.62  E-value=0.0031  Score=58.27  Aligned_cols=38  Identities=21%  Similarity=0.238  Sum_probs=27.5

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+ ++||+|+||+|.+|..++..|...+.+      ||+.+...
T Consensus         1 M~~-~~kV~IiGAtG~iG~~llr~L~~~p~~------elv~v~s~   38 (345)
T 2ozp_A            1 MTG-KKTLSIVGASGYAGGEFLRLALSHPYL------EVKQVTSR   38 (345)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHTCTTE------EEEEEBCS
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHcCCCc------EEEEEECc
Confidence            444 479999998899999999988866432      77666443

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=96.60  E-value=0.0014  Score=60.10  Aligned_cols=71  Identities=11%  Similarity=0.088  Sum_probs=46.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      |+++++||+|||+ |.+|..++..|...+-+      +|+ ++|++    .++++..+...     +.   ....++..+
T Consensus         1 M~m~~~~igiiG~-G~~g~~~~~~l~~~~~~------~l~av~d~~----~~~~~~~~~~~-----~~---~~~~~~~~~   61 (330)
T 3e9m_A            1 MSLDKIRYGIMST-AQIVPRFVAGLRESAQA------EVRGIASRR----LENAQKMAKEL-----AI---PVAYGSYEE   61 (330)
T ss_dssp             --CCCEEEEECSC-CTTHHHHHHHHHHSSSE------EEEEEBCSS----SHHHHHHHHHT-----TC---CCCBSSHHH
T ss_pred             CCCCeEEEEEECc-hHHHHHHHHHHHhCCCc------EEEEEEeCC----HHHHHHHHHHc-----CC---CceeCCHHH
Confidence            4456689999998 99999999998875322      555 78988    44444322211     11   023355566


Q ss_pred             ccC--CccEEEEe
Q psy9582          80 AFK--DANIAILI   90 (329)
Q Consensus        80 al~--~aDiVi~~   90 (329)
                      .+.  ++|+|+++
T Consensus        62 ll~~~~~D~V~i~   74 (330)
T 3e9m_A           62 LCKDETIDIIYIP   74 (330)
T ss_dssp             HHHCTTCSEEEEC
T ss_pred             HhcCCCCCEEEEc
Confidence            665  79999997

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.60  E-value=0.0024  Score=59.04  Aligned_cols=91  Identities=15%  Similarity=0.237  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..||+.    ....+ .    ..       ......++.+.+++|
T Consensus       173 gktvGIIGl-G~IG~~vA~~l~~~G~-------~V~~~dr~----~~~~~-~----~~-------g~~~~~~l~ell~~s  228 (345)
T 4g2n_A          173 GRRLGIFGM-GRIGRAIATRARGFGL-------AIHYHNRT----RLSHA-L----EE-------GAIYHDTLDSLLGAS  228 (345)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHTTTC-------EEEEECSS----CCCHH-H----HT-------TCEECSSHHHHHHTC
T ss_pred             CCEEEEEEe-ChhHHHHHHHHHHCCC-------EEEEECCC----Ccchh-h----hc-------CCeEeCCHHHHHhhC
Confidence            479999999 9999999999998777       89999997    22211 1    00       122224677889999


Q ss_pred             cEEEEeCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFP-RKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~-~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.... ...+.     +  |    .   +.+... +|++++|+++.
T Consensus       229 DvV~l~~Plt~~T~~l-----i--~----~---~~l~~m-k~gailIN~aR  264 (345)
T 4g2n_A          229 DIFLIAAPGRPELKGF-----L--D----H---DRIAKI-PEGAVVINISR  264 (345)
T ss_dssp             SEEEECSCCCGGGTTC-----B--C----H---HHHHHS-CTTEEEEECSC
T ss_pred             CEEEEecCCCHHHHHH-----h--C----H---HHHhhC-CCCcEEEECCC
Confidence            9999974321 11111     0  1    1   223333 58999999984

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=96.60  E-value=0.0019  Score=58.47  Aligned_cols=67  Identities=7%  Similarity=0.155  Sum_probs=45.3

Q ss_pred             CCEEEEEcCCCchHHH-HHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYN-IIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ++||+|||+ |.+|.. ++..|...+-+      +++ ++|++    .++++..+...     +    +...++..+.++
T Consensus         6 ~~~igiIG~-G~~g~~~~~~~l~~~~~~------~l~av~d~~----~~~~~~~a~~~-----~----~~~~~~~~~ll~   65 (308)
T 3uuw_A            6 NIKMGMIGL-GSIAQKAYLPILTKSERF------EFVGAFTPN----KVKREKICSDY-----R----IMPFDSIESLAK   65 (308)
T ss_dssp             CCEEEEECC-SHHHHHHTHHHHTSCSSS------EEEEEECSC----HHHHHHHHHHH-----T----CCBCSCHHHHHT
T ss_pred             cCcEEEEec-CHHHHHHHHHHHHhCCCe------EEEEEECCC----HHHHHHHHHHc-----C----CCCcCCHHHHHh
Confidence            489999999 999995 78877764322      666 89998    55554332222     1    111356677778


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      ++|+|+++.
T Consensus        66 ~~D~V~i~t   74 (308)
T 3uuw_A           66 KCDCIFLHS   74 (308)
T ss_dssp             TCSEEEECC
T ss_pred             cCCEEEEeC
Confidence            999999973

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.57  E-value=0.0022  Score=59.41  Aligned_cols=99  Identities=16%  Similarity=0.183  Sum_probs=56.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC-----CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD-----LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~-----~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      +||+|+||+|.+|+.+...|...+     .+      ||+++....  +.    +...+-.+.......++.+..-..++
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~------ei~~l~s~~--~a----gk~~~~~~~~l~~~~~~~~~~~~~~~   77 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRL------RIGALTAAT--SA----GSTLGEHHPHLTPLAHRVVEPTEAAV   77 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSE------EEEEEEESS--CT----TSBGGGTCTTCGGGTTCBCEECCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccE------EEEEEECCC--cC----CCchhhhcccccccceeeeccCCHHH
Confidence            799999999999999999998776     33      787775431  01    11111101000000112221112456


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      ++++|+||.+.|...                .+++++.+ +   ..+++|-.|.|-
T Consensus        78 ~~~~DvVf~alg~~~----------------s~~~~~~~-~---~G~~vIDlSa~~  113 (352)
T 2nqt_A           78 LGGHDAVFLALPHGH----------------SAVLAQQL-S---PETLIIDCGADF  113 (352)
T ss_dssp             HTTCSEEEECCTTSC----------------CHHHHHHS-C---TTSEEEECSSTT
T ss_pred             hcCCCEEEECCCCcc----------------hHHHHHHH-h---CCCEEEEECCCc
Confidence            789999999855321                23445555 3   246788888775

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.57  E-value=0.0039  Score=55.13  Aligned_cols=65  Identities=15%  Similarity=0.192  Sum_probs=47.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      +|+|||+ |.+|.+++..|...+.       +|.++|++    .++++..+..+.     .    . ..+..+. +++|+
T Consensus       118 ~v~iiG~-G~~g~~~a~~l~~~g~-------~v~v~~r~----~~~~~~l~~~~~-----~----~-~~~~~~~-~~~Di  174 (263)
T 2d5c_A          118 PALVLGA-GGAGRAVAFALREAGL-------EVWVWNRT----PQRALALAEEFG-----L----R-AVPLEKA-REARL  174 (263)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHHHHHHHT-----C----E-ECCGGGG-GGCSE
T ss_pred             eEEEECC-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhc-----c----c-hhhHhhc-cCCCE
Confidence            8999998 9999999999998886       69999998    444443322221     1    1 2355566 89999


Q ss_pred             EEEeCCCC
Q psy9582          87 AILIGSFP   94 (329)
Q Consensus        87 Vi~~~g~~   94 (329)
                      ||++...+
T Consensus       175 vi~~tp~~  182 (263)
T 2d5c_A          175 LVNATRVG  182 (263)
T ss_dssp             EEECSSTT
T ss_pred             EEEccCCC
Confidence            99985443

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.57  E-value=0.0021  Score=58.79  Aligned_cols=93  Identities=14%  Similarity=0.160  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec-CCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA-SNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..+|+ +    .+..  ...++   .      +....++.+.+++
T Consensus       146 g~~vgIIG~-G~IG~~~A~~l~~~G~-------~V~~~d~~~----~~~~--~~~~~---g------~~~~~~l~ell~~  202 (320)
T 1gdh_A          146 NKTLGIYGF-GSIGQALAKRAQGFDM-------DIDYFDTHR----ASSS--DEASY---Q------ATFHDSLDSLLSV  202 (320)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSSC----CCHH--HHHHH---T------CEECSSHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCCC----cChh--hhhhc---C------cEEcCCHHHHHhh
Confidence            479999998 9999999999998776       8999999 7    3221  11111   1      1222356778899


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ||+|+++.....  . ++.        ++.  .+.+... +|++++|+++.
T Consensus       203 aDvVil~~p~~~--~-t~~--------~i~--~~~l~~m-k~gailIn~ar  239 (320)
T 1gdh_A          203 SQFFSLNAPSTP--E-TRY--------FFN--KATIKSL-PQGAIVVNTAR  239 (320)
T ss_dssp             CSEEEECCCCCT--T-TTT--------CBS--HHHHTTS-CTTEEEEECSC
T ss_pred             CCEEEEeccCch--H-HHh--------hcC--HHHHhhC-CCCcEEEECCC
Confidence            999999743211  1 110        110  1223333 58899999874

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.57  E-value=0.0037  Score=59.37  Aligned_cols=91  Identities=15%  Similarity=0.096  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..++++|+|. |.||..+|..+...|.       +|..+|++    ..+.. .+.  .+   .    +.. .++.++++.
T Consensus       246 ~GKTVgVIG~-G~IGr~vA~~lrafGa-------~Viv~d~d----p~~a~-~A~--~~---G----~~v-v~LeElL~~  302 (464)
T 3n58_A          246 AGKVAVVCGY-GDVGKGSAQSLAGAGA-------RVKVTEVD----PICAL-QAA--MD---G----FEV-VTLDDAAST  302 (464)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----HHHHH-HHH--HT---T----CEE-CCHHHHGGG
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEEeCC----cchhh-HHH--hc---C----cee-ccHHHHHhh
Confidence            4579999998 9999999999998887       89999998    32221 110  01   1    122 245788999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ||+|+.+.+...   .           +-.   +.+... ++++++||++..
T Consensus       303 ADIVv~atgt~~---l-----------I~~---e~l~~M-K~GAILINvGRg  336 (464)
T 3n58_A          303 ADIVVTTTGNKD---V-----------ITI---DHMRKM-KDMCIVGNIGHF  336 (464)
T ss_dssp             CSEEEECCSSSS---S-----------BCH---HHHHHS-CTTEEEEECSSS
T ss_pred             CCEEEECCCCcc---c-----------cCH---HHHhcC-CCCeEEEEcCCC
Confidence            999998754321   1           011   233333 588999999864

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=96.57  E-value=0.0024  Score=57.95  Aligned_cols=88  Identities=17%  Similarity=0.224  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..+|++    .+  ..      . .       ....++.+.+++|
T Consensus       124 g~~vgIIG~-G~IG~~~A~~l~~~G~-------~V~~~dr~----~~--~~------~-~-------~~~~~l~ell~~a  175 (303)
T 1qp8_A          124 GEKVAVLGL-GEIGTRVGKILAALGA-------QVRGFSRT----PK--EG------P-W-------RFTNSLEEALREA  175 (303)
T ss_dssp             TCEEEEESC-STHHHHHHHHHHHTTC-------EEEEECSS----CC--CS------S-S-------CCBSCSHHHHTTC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHHCCC-------EEEEECCC----cc--cc------C-c-------ccCCCHHHHHhhC
Confidence            479999998 9999999999998886       89999998    22  11      0 0       0113466889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.....  . ++.        ++.  .+.+.. .+|++++|+++.
T Consensus       176 DvV~l~~P~~~--~-t~~--------~i~--~~~l~~-mk~gailin~sr  211 (303)
T 1qp8_A          176 RAAVCALPLNK--H-TRG--------LVK--YQHLAL-MAEDAVFVNVGR  211 (303)
T ss_dssp             SEEEECCCCST--T-TTT--------CBC--HHHHTT-SCTTCEEEECSC
T ss_pred             CEEEEeCcCch--H-HHH--------HhC--HHHHhh-CCCCCEEEECCC
Confidence            99999743221  0 110        110  123333 358899999974

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.55  E-value=0.0071  Score=56.24  Aligned_cols=71  Identities=23%  Similarity=0.428  Sum_probs=44.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||+|+||+|.+|..+...|...+. .   ..++.++....      -.|....+..      .++.+..-..++++++|
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~-p---~~el~~~as~~------saG~~~~~~~------~~~~~~~~~~~~~~~~D   66 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTL-P---IDKIRYLASAR------SAGKSLKFKD------QDITIEETTETAFEGVD   66 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCC-C---EEEEEEEECTT------TTTCEEEETT------EEEEEEECCTTTTTTCS
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCC-C---cEEEEEEEccc------cCCCcceecC------CCceEeeCCHHHhcCCC
Confidence            6899999999999999998887642 1   02788876541      1122111111      12333322235688999


Q ss_pred             EEEEeCC
Q psy9582          86 IAILIGS   92 (329)
Q Consensus        86 iVi~~~g   92 (329)
                      +||.+.+
T Consensus        67 vvf~a~~   73 (366)
T 3pwk_A           67 IALFSAG   73 (366)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999754

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=96.55  E-value=0.0021  Score=58.84  Aligned_cols=71  Identities=7%  Similarity=0.046  Sum_probs=44.0

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceE-EEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIIL-QLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      |+++++||+|||+ |.+|..++..|...+-+      +| .++|++    .++++..+...     +.   ....++..+
T Consensus         1 M~m~~~rigiiG~-G~ig~~~~~~l~~~~~~------~~~av~d~~----~~~~~~~a~~~-----~~---~~~~~~~~~   61 (329)
T 3evn_A            1 MSLSKVRYGVVST-AKVAPRFIEGVRLAGNG------EVVAVSSRT----LESAQAFANKY-----HL---PKAYDKLED   61 (329)
T ss_dssp             ----CEEEEEEBC-CTTHHHHHHHHHHHCSE------EEEEEECSC----SSTTCC---CC-----CC---SCEESCHHH
T ss_pred             CCCCceEEEEEec-hHHHHHHHHHHHhCCCc------EEEEEEcCC----HHHHHHHHHHc-----CC---CcccCCHHH
Confidence            5556789999999 99999998888765432      44 478988    44443221111     11   123456666


Q ss_pred             ccC--CccEEEEe
Q psy9582          80 AFK--DANIAILI   90 (329)
Q Consensus        80 al~--~aDiVi~~   90 (329)
                      .+.  +.|+|+++
T Consensus        62 ll~~~~~D~V~i~   74 (329)
T 3evn_A           62 MLADESIDVIYVA   74 (329)
T ss_dssp             HHTCTTCCEEEEC
T ss_pred             HhcCCCCCEEEEC
Confidence            776  78999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.54  E-value=0.0012  Score=63.37  Aligned_cols=76  Identities=9%  Similarity=0.179  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|.|+|+ |++|++++..|+..+.       +|+++|++    .++++..+..+.... ....++.-..+..++++++
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~-------~V~v~~R~----~~~a~~la~~~~~~~-~~~~Dv~d~~~l~~~l~~~   69 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGI-------KVTVACRT----LESAKKLSAGVQHST-PISLDVNDDAALDAEVAKH   69 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC-------EEEEEESS----HHHHHHTTTTCTTEE-EEECCTTCHHHHHHHHTTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcC-------EEEEEECC----HHHHHHHHHhcCCce-EEEeecCCHHHHHHHHcCC
Confidence            368999996 9999999999998775       89999998    444432221111000 0000010011234667899


Q ss_pred             cEEEEeCCC
Q psy9582          85 NIAILIGSF   93 (329)
Q Consensus        85 DiVi~~~g~   93 (329)
                      |+||++++.
T Consensus        70 DvVIn~a~~   78 (450)
T 1ff9_A           70 DLVISLIPY   78 (450)
T ss_dssp             SEEEECCC-
T ss_pred             cEEEECCcc
Confidence            999998764

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.54  E-value=0.0031  Score=58.03  Aligned_cols=92  Identities=11%  Similarity=0.107  Sum_probs=58.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..||++    ....  ..   ...  .    +.. .++.+.+++|
T Consensus       165 g~tvgIIGl-G~IG~~vA~~l~~~G~-------~V~~~d~~----~~~~--~~---~~~--g----~~~-~~l~ell~~a  220 (335)
T 2g76_A          165 GKTLGILGL-GRIGREVATRMQSFGM-------KTIGYDPI----ISPE--VS---ASF--G----VQQ-LPLEEIWPLC  220 (335)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSS----SCHH--HH---HHT--T----CEE-CCHHHHGGGC
T ss_pred             cCEEEEEeE-CHHHHHHHHHHHHCCC-------EEEEECCC----cchh--hh---hhc--C----cee-CCHHHHHhcC
Confidence            479999998 9999999999987776       89999988    2221  11   111  1    111 2567889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.....  . ++.        ++.  .+.+... +|++++|+++-
T Consensus       221 DvV~l~~P~t~--~-t~~--------li~--~~~l~~m-k~gailIN~ar  256 (335)
T 2g76_A          221 DFITVHTPLLP--S-TTG--------LLN--DNTFAQC-KKGVRVVNCAR  256 (335)
T ss_dssp             SEEEECCCCCT--T-TTT--------SBC--HHHHTTS-CTTEEEEECSC
T ss_pred             CEEEEecCCCH--H-HHH--------hhC--HHHHhhC-CCCcEEEECCC
Confidence            99999743321  1 110        110  1233333 58899999874

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.54  E-value=0.0023  Score=59.27  Aligned_cols=92  Identities=8%  Similarity=0.089  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..|...|.       +|..+|++    ....  ...+.     .    +....++.+.+++|
T Consensus       168 g~tvGIIG~-G~IG~~vA~~l~~~G~-------~V~~~d~~----~~~~--~~~~~-----g----~~~~~~l~ell~~a  224 (347)
T 1mx3_A          168 GETLGIIGL-GRVGQAVALRAKAFGF-------NVLFYDPY----LSDG--VERAL-----G----LQRVSTLQDLLFHS  224 (347)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECTT----SCTT--HHHHH-----T----CEECSSHHHHHHHC
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCC-------EEEEECCC----cchh--hHhhc-----C----CeecCCHHHHHhcC
Confidence            479999998 9999999999998886       89999987    2211  11111     1    12223567788999


Q ss_pred             cEEEEeCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFP-RKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~-~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.... ...+            ++.  .+.+... +|++++|+++.
T Consensus       225 DvV~l~~P~t~~t~~------------li~--~~~l~~m-k~gailIN~ar  260 (347)
T 1mx3_A          225 DCVTLHCGLNEHNHH------------LIN--DFTVKQM-RQGAFLVNTAR  260 (347)
T ss_dssp             SEEEECCCCCTTCTT------------SBS--HHHHTTS-CTTEEEEECSC
T ss_pred             CEEEEcCCCCHHHHH------------HhH--HHHHhcC-CCCCEEEECCC
Confidence            9999974321 1111            110  1233333 58899999973

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.53  E-value=0.0021  Score=59.59  Aligned_cols=92  Identities=10%  Similarity=0.073  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..||++    ... + .   ....      .++...++.+.+++|
T Consensus       160 g~tvGIIGl-G~IG~~vA~~l~~~G~-------~V~~~d~~----~~~-~-~---~~~~------g~~~~~~l~ell~~a  216 (352)
T 3gg9_A          160 GQTLGIFGY-GKIGQLVAGYGRAFGM-------NVLVWGRE----NSK-E-R---ARAD------GFAVAESKDALFEQS  216 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSH----HHH-H-H---HHHT------TCEECSSHHHHHHHC
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHhCCC-------EEEEECCC----CCH-H-H---HHhc------CceEeCCHHHHHhhC
Confidence            479999999 9999999999998887       89999987    211 1 1   1111      122334677889999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++... +...+.     +  |       .+.+... +|++++|+++.
T Consensus       217 DiV~l~~Plt~~t~~l-----i--~-------~~~l~~m-k~gailIN~aR  252 (352)
T 3gg9_A          217 DVLSVHLRLNDETRSI-----I--T-------VADLTRM-KPTALFVNTSR  252 (352)
T ss_dssp             SEEEECCCCSTTTTTC-----B--C-------HHHHTTS-CTTCEEEECSC
T ss_pred             CEEEEeccCcHHHHHh-----h--C-------HHHHhhC-CCCcEEEECCC
Confidence            999997432 111111     0  1       1233443 58999999984

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=96.52  E-value=0.0028  Score=57.59  Aligned_cols=70  Identities=14%  Similarity=0.184  Sum_probs=42.0

Q ss_pred             CCCCCCEEEEEcCCCchHHH-HHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           1 MLKKPVRISITGAAGQIGYN-IIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      ||++++||+|||+ |.+|.. ++..|....-+      +|+ ++|++    .++++..+...     +    +..+++. 
T Consensus         1 m~m~~~~vgiiG~-G~~g~~~~~~~l~~~~~~------~lvav~d~~----~~~~~~~~~~~-----g----~~~~~~~-   59 (319)
T 1tlt_A            1 MSLKKLRIGVVGL-GGIAQKAWLPVLAAASDW------TLQGAWSPT----RAKALPICESW-----R----IPYADSL-   59 (319)
T ss_dssp             ----CEEEEEECC-STHHHHTHHHHHHSCSSE------EEEEEECSS----CTTHHHHHHHH-----T----CCBCSSH-
T ss_pred             CCCCcceEEEECC-CHHHHHHHHHHHHhCCCe------EEEEEECCC----HHHHHHHHHHc-----C----CCccCcH-
Confidence            6667799999999 999986 88877753221      665 99998    44444322111     1    1122333 


Q ss_pred             ccc-CCccEEEEeC
Q psy9582          79 TAF-KDANIAILIG   91 (329)
Q Consensus        79 ~al-~~aDiVi~~~   91 (329)
                      +++ .++|+|+++.
T Consensus        60 ~~l~~~~D~V~i~t   73 (319)
T 1tlt_A           60 SSLAASCDAVFVHS   73 (319)
T ss_dssp             HHHHTTCSEEEECS
T ss_pred             HHhhcCCCEEEEeC
Confidence            344 6899999973

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.52  E-value=0.0028  Score=56.90  Aligned_cols=74  Identities=12%  Similarity=0.132  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--CcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~~~al~   82 (329)
                      ..++.|+|| |.+|.+++..|...|.-      +|+++|++    .++++..+.++.... +. ..+....  ++.++++
T Consensus       127 ~k~vlVlGa-GG~g~aia~~L~~~G~~------~v~i~~R~----~~~a~~la~~~~~~~-~~-~~i~~~~~~~l~~~l~  193 (283)
T 3jyo_A          127 LDSVVQVGA-GGVGNAVAYALVTHGVQ------KLQVADLD----TSRAQALADVINNAV-GR-EAVVGVDARGIEDVIA  193 (283)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSS----HHHHHHHHHHHHHHH-TS-CCEEEECSTTHHHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCC------EEEEEECC----HHHHHHHHHHHHhhc-CC-ceEEEcCHHHHHHHHh
Confidence            478999999 99999999999988762      79999998    666665555554321 11 1233333  5567788


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      ++|+||.+.
T Consensus       194 ~~DiVInaT  202 (283)
T 3jyo_A          194 AADGVVNAT  202 (283)
T ss_dssp             HSSEEEECS
T ss_pred             cCCEEEECC
Confidence            999999874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.50  E-value=0.0018  Score=59.27  Aligned_cols=33  Identities=24%  Similarity=0.299  Sum_probs=29.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++|.|+||+|++|.+++..|++.|.       ++++++++
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~-------~v~~v~r~   35 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYAT   35 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT-------CCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------ceEEEEee
Confidence            5789999999999999999999886       67777766

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.50  E-value=0.0034  Score=58.49  Aligned_cols=111  Identities=18%  Similarity=0.268  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC----CcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS----NKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~----~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ..||.|+|| |.+|..++..|+..|. +     +|+++|++    .++....+......+.+.. .   ......++.++
T Consensus       192 ~~kVVv~GA-GaAG~~iAkll~~~G~-~-----~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~-~---~~~~~~~L~ea  260 (388)
T 1vl6_A          192 EVKVVVNGI-GAAGYNIVKFLLDLGV-K-----NVVAVDRKGILNENDPETCLNEYHLEIARIT-N---PERLSGDLETA  260 (388)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTC-C-----EEEEEETTEECCTTSGGGCSSHHHHHHHHTS-C---TTCCCSCHHHH
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCC-C-----eEEEEECCCcccCCCcccccCHHHHHHHHhh-h---ccCchhhHHHH
Confidence            479999999 9999999999998775 3     89999997    3211000222222222211 1   11123568899


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh-hHHHHHHH
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN-TNTYITMK  145 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~-~~~~~~~~  145 (329)
                      ++++|++|=+.+ |   +           -+.+++.+.|+    ++.+|+=.+||.- +.-+-+.+
T Consensus       261 v~~ADVlIG~Sa-p---~-----------l~t~emVk~Ma----~~pIIfalSNPt~E~~p~~a~~  307 (388)
T 1vl6_A          261 LEGADFFIGVSR-G---N-----------ILKPEWIKKMS----RKPVIFALANPVPEIDPELARE  307 (388)
T ss_dssp             HTTCSEEEECSC-S---S-----------CSCHHHHTTSC----SSCEEEECCSSSCSSCHHHHHH
T ss_pred             HccCCEEEEeCC-C---C-----------ccCHHHHHhcC----CCCEEEEcCCCCCCCCHHHHHH
Confidence            999999887644 3   2           12233444433    4568888899973 44444444

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.47  E-value=0.0011  Score=62.64  Aligned_cols=77  Identities=14%  Similarity=0.192  Sum_probs=49.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCC-CCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe----ecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLL-GKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV----HENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~-~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~----~~~~~~a   80 (329)
                      +||+|+|| |++|+.++..|++.+-. .     +|.+.|++    .++++..+..+.....+....+..    ..+..+.
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~-----~V~v~~r~----~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFS-----HITLASRT----LSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCC-----EEEEEESC----HHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCce-----EEEEEECC----HHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH
Confidence            48999999 99999999999987632 3     89999999    666665554443210000001111    1233445


Q ss_pred             cCC--ccEEEEeCC
Q psy9582          81 FKD--ANIAILIGS   92 (329)
Q Consensus        81 l~~--aDiVi~~~g   92 (329)
                      +++  +|+||.+++
T Consensus        72 l~~~~~DvVin~ag   85 (405)
T 4ina_A           72 INEVKPQIVLNIAL   85 (405)
T ss_dssp             HHHHCCSEEEECSC
T ss_pred             HHhhCCCEEEECCC
Confidence            665  899999875

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.44  E-value=0.0022  Score=58.44  Aligned_cols=64  Identities=16%  Similarity=0.121  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.+|..+...|.       +|..+|++    .+...  .   ...  .    +.. .++.+.+++|
T Consensus       142 g~~vgIIG~-G~IG~~~A~~l~~~G~-------~V~~~d~~----~~~~~--~---~~~--g----~~~-~~l~ell~~a  197 (313)
T 2ekl_A          142 GKTIGIVGF-GRIGTKVGIIANAMGM-------KVLAYDIL----DIREK--A---EKI--N----AKA-VSLEELLKNS  197 (313)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCHHH--H---HHT--T----CEE-CCHHHHHHHC
T ss_pred             CCEEEEEee-CHHHHHHHHHHHHCCC-------EEEEECCC----cchhH--H---Hhc--C----cee-cCHHHHHhhC
Confidence            479999998 9999999999998886       89999998    33211  1   111  1    111 2566788999


Q ss_pred             cEEEEeCC
Q psy9582          85 NIAILIGS   92 (329)
Q Consensus        85 DiVi~~~g   92 (329)
                      |+|+++..
T Consensus       198 DvVvl~~P  205 (313)
T 2ekl_A          198 DVISLHVT  205 (313)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEecc
Confidence            99999743

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.44  E-value=0.0047  Score=58.03  Aligned_cols=94  Identities=16%  Similarity=0.282  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.||+.+|..+...|.       +|..+|++    ....+ ...++         .+....++.+.+++|
T Consensus       191 gktvGIIGl-G~IG~~vA~~l~a~G~-------~V~~~d~~----~~~~~-~~~~~---------G~~~~~~l~ell~~a  248 (393)
T 2nac_A          191 AMHVGTVAA-GRIGLAVLRRLAPFDV-------HLHYTDRH----RLPES-VEKEL---------NLTWHATREDMYPVC  248 (393)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGTC-------EEEEECSS----CCCHH-HHHHH---------TCEECSSHHHHGGGC
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHhCCC-------EEEEEcCC----ccchh-hHhhc---------CceecCCHHHHHhcC
Confidence            479999999 9999999999988776       89999987    32221 11111         112223567889999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|+++.....  . ++. ++  |       .+.+... ++++++|+++.
T Consensus       249 DvV~l~~Plt~--~-t~~-li--~-------~~~l~~m-k~gailIN~aR  284 (393)
T 2nac_A          249 DVVTLNCPLHP--E-TEH-MI--N-------DETLKLF-KRGAYIVNTAR  284 (393)
T ss_dssp             SEEEECSCCCT--T-TTT-CB--S-------HHHHTTS-CTTEEEEECSC
T ss_pred             CEEEEecCCch--H-HHH-Hh--h-------HHHHhhC-CCCCEEEECCC
Confidence            99999743211  1 110 01  1       1223333 58899999974

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=96.43  E-value=0.0017  Score=60.30  Aligned_cols=71  Identities=11%  Similarity=0.163  Sum_probs=45.3

Q ss_pred             CCCCCCEEEEEcCCCchHHH-HHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           1 MLKKPVRISITGAAGQIGYN-IIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      |+++++||+|||+ |.+|.. ++..|...+-+      +|+ ++|++    .++++..+..+        ......++..
T Consensus         1 M~M~~~rigiIG~-G~~g~~~~~~~l~~~~~~------~l~av~d~~----~~~~~~~a~~~--------~~~~~~~~~~   61 (359)
T 3m2t_A            1 MSLSLIKVGLVGI-GAQMQENLLPSLLQMQDI------RIVAACDSD----LERARRVHRFI--------SDIPVLDNVP   61 (359)
T ss_dssp             --CCCEEEEEECC-SHHHHHTHHHHHHTCTTE------EEEEEECSS----HHHHGGGGGTS--------CSCCEESSHH
T ss_pred             CCCCcceEEEECC-CHHHHHHHHHHHHhCCCc------EEEEEEcCC----HHHHHHHHHhc--------CCCcccCCHH
Confidence            6566799999998 999984 78888765322      665 88998    55444222111        1223446666


Q ss_pred             cccC--CccEEEEe
Q psy9582          79 TAFK--DANIAILI   90 (329)
Q Consensus        79 ~al~--~aDiVi~~   90 (329)
                      +.++  +.|+|+++
T Consensus        62 ~ll~~~~vD~V~i~   75 (359)
T 3m2t_A           62 AMLNQVPLDAVVMA   75 (359)
T ss_dssp             HHHHHSCCSEEEEC
T ss_pred             HHhcCCCCCEEEEc
Confidence            6665  55999997

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=96.42  E-value=0.002  Score=58.75  Aligned_cols=58  Identities=17%  Similarity=0.251  Sum_probs=45.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.+|..+...|.       +|..+|++    .+...         . .       ..++.+.+++|
T Consensus       144 g~~vgIIG~-G~IG~~~A~~l~~~G~-------~V~~~d~~----~~~~~---------~-~-------~~~l~ell~~a  194 (311)
T 2cuk_A          144 GLTLGLVGM-GRIGQAVAKRALAFGM-------RVVYHART----PKPLP---------Y-P-------FLSLEELLKEA  194 (311)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCSSS---------S-C-------BCCHHHHHHHC
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHCCC-------EEEEECCC----Ccccc---------c-c-------cCCHHHHHhhC
Confidence            478999998 9999999999998886       89999998    32221         0 0       13456788999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+++.
T Consensus       195 DvV~l~~  201 (311)
T 2cuk_A          195 DVVSLHT  201 (311)
T ss_dssp             SEEEECC
T ss_pred             CEEEEeC
Confidence            9999974

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.42  E-value=0.0078  Score=55.45  Aligned_cols=35  Identities=26%  Similarity=0.473  Sum_probs=26.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEe
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLE   43 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D   43 (329)
                      ++||+|+||+|.+|+.++..|.+++.-.    .+|+++.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~----~elv~i~   40 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPL----HRLHLLA   40 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCC----SCEEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCc----EEEEEEe
Confidence            4799999999999999999888553211    2677664

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.42  E-value=0.0045  Score=57.29  Aligned_cols=34  Identities=21%  Similarity=0.421  Sum_probs=26.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL   42 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~   42 (329)
                      ++++||+|+||+|.+|..++..|...+.+      ||+.+
T Consensus         2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~~------elvai   35 (350)
T 2ep5_A            2 ADKIKVSLLGSTGMVGQKMVKMLAKHPYL------ELVKV   35 (350)
T ss_dssp             CCCEEEEEESCSSHHHHHHHHHHTTCSSE------EEEEE
T ss_pred             CCCcEEEEECcCCHHHHHHHHHHHhCCCc------EEEEE
Confidence            34589999998899999999988765432      77766

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.37  E-value=0.0091  Score=55.84  Aligned_cols=31  Identities=19%  Similarity=0.408  Sum_probs=25.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL   42 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~   42 (329)
                      +||+|+||+|.+|..+...|.....+      ||..+
T Consensus        20 ~kVaIvGAtG~vG~ell~lL~~hp~~------el~~l   50 (381)
T 3hsk_A           20 KKAGVLGATGSVGQRFILLLSKHPEF------EIHAL   50 (381)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSE------EEEEE
T ss_pred             cEEEEECCCChHHHHHHHHHHcCCCc------eEEEe
Confidence            79999999999999999988776543      77544

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.36  E-value=0.0031  Score=57.28  Aligned_cols=63  Identities=17%  Similarity=0.219  Sum_probs=46.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.+|..+...|.       +|..+|++    .+. . ...+.     .    +.. .++.+.+++|
T Consensus       142 g~~vgIiG~-G~IG~~~A~~l~~~G~-------~V~~~d~~----~~~-~-~~~~~-----g----~~~-~~l~ell~~a  197 (307)
T 1wwk_A          142 GKTIGIIGF-GRIGYQVAKIANALGM-------NILLYDPY----PNE-E-RAKEV-----N----GKF-VDLETLLKES  197 (307)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCH-H-HHHHT-----T----CEE-CCHHHHHHHC
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCC-------EEEEECCC----CCh-h-hHhhc-----C----ccc-cCHHHHHhhC
Confidence            479999998 9999999999998886       89999998    322 1 11111     1    111 2466788999


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+|+++.
T Consensus       198 DvV~l~~  204 (307)
T 1wwk_A          198 DVVTIHV  204 (307)
T ss_dssp             SEEEECC
T ss_pred             CEEEEec
Confidence            9999974

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.35  E-value=0.0029  Score=55.92  Aligned_cols=66  Identities=12%  Similarity=0.162  Sum_probs=47.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      |++|+|+ |.+|.+++..|...|. .     +|+++|++    .++++..+.++.         .....+..++++++|+
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~-~-----~I~v~nR~----~~ka~~la~~~~---------~~~~~~~~~~~~~aDi  169 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGV-K-----DIWVVNRT----IERAKALDFPVK---------IFSLDQLDEVVKKAKS  169 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-C-----CEEEEESC----HHHHHTCCSSCE---------EEEGGGHHHHHHTCSE
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCC-C-----EEEEEeCC----HHHHHHHHHHcc---------cCCHHHHHhhhcCCCE
Confidence            8999999 9999999999999875 2     79999998    444442221111         1122345567889999


Q ss_pred             EEEeCC
Q psy9582          87 AILIGS   92 (329)
Q Consensus        87 Vi~~~g   92 (329)
                      ||.+..
T Consensus       170 VInatp  175 (253)
T 3u62_A          170 LFNTTS  175 (253)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999743

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=96.35  E-value=0.0026  Score=59.43  Aligned_cols=103  Identities=15%  Similarity=0.224  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC--cccc-cchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN--KKSQ-KAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~--~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      ..||+|+|| |..|.+++..++..|. +     +|+++|++-  -+.+ +.+......+.+...+    .....++.+++
T Consensus       188 d~kVVi~GA-GaAG~~iA~ll~~~Ga-~-----~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~----~~~~~~L~eav  256 (398)
T 2a9f_A          188 EVSIVVNGG-GSAGLSITRKLLAAGA-T-----KVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR----EFKSGTLEDAL  256 (398)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTC-C-----EEEEEETTEECCTTCCCSCCC---CHHHHHSC----TTCCCSCSHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEEECCCcccCCccccchHHHHHHhhccCc----ccchhhHHHHh
Confidence            479999999 9999999999998775 3     899999971  0001 1122111111111000    01134578999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      ++||++|=+.+ |   +.           +.+++.+.|+    ++.+|+-++||.-
T Consensus       257 ~~ADV~IG~Sa-p---gl-----------~T~EmVk~Ma----~~pIIfalsNPt~  293 (398)
T 2a9f_A          257 EGADIFIGVSA-P---GV-----------LKAEWISKMA----ARPVIFAMANPIP  293 (398)
T ss_dssp             HTTCSEEECCS-T---TC-----------CCHHHHHTSC----SSCEEEECCSSSC
T ss_pred             ccCCEEEecCC-C---CC-----------CCHHHHHhhC----CCCEEEECCCCCc
Confidence            99999775532 2   21           2233444443    6789999999974

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.34  E-value=0.0047  Score=57.40  Aligned_cols=35  Identities=31%  Similarity=0.486  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++||+|+||+|.+|..++..|...+.+      ||+.+...
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~------elvai~~~   50 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHF------QVTLMTAD   50 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSE------EEEEEBCS
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCc------EEEEEeCc
Confidence            379999998899999999999876543      67766544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	329
d7mdha1	175	c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (	2e-52
d7mdha2	188	d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghu	2e-48
d5mdha2	179	d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (S	7e-43
d1y7ta1	154	c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus th	1e-41
d1y7ta2	173	d.162.1.1 (A:154-332) Malate dehydrogenase {Thermu	2e-41
d5mdha1	154	c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus s	7e-41
d1b8pa2	171	d.162.1.1 (A:159-329) Malate dehydrogenase {Aquasp	2e-36
d1ldma2	169	d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfi	1e-29
d1i0za2	172	d.162.1.1 (A:161-332) Lactate dehydrogenase {Human	6e-29
d2ldxa2	172	d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse	9e-29
d1pzga2	174	d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxop	6e-28
d1llda2	170	d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifid	1e-27
d1guza2	163	d.162.1.1 (A:143-305) Malate dehydrogenase {Chloro	2e-27
d1ldna2	168	d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacil	6e-26
d1hyea2	168	d.162.1.1 (A:146-313) MJ0490, lactate/malate dehyd	2e-25
d1uxja2	164	d.162.1.1 (A:144-307) Malate dehydrogenase {Chloro	3e-25
d1y6ja2	169	d.162.1.1 (A:149-317) Lactate dehydrogenase {Clost	2e-24
d1ez4a2	171	d.162.1.1 (A:163-334) Lactate dehydrogenase {Lacto	3e-24
d1a5za2	172	d.162.1.1 (A:164-333) Lactate dehydrogenase {Therm	3e-24
d1mlda2	169	d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (S	9e-24
d1t2da2	165	d.162.1.1 (A:151-315) Lactate dehydrogenase {Malar	1e-23
d1hyha2	163	d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehy	1e-23
d2cmda2	167	d.162.1.1 (A:146-312) Malate dehydrogenase {Escher	4e-23
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	9e-23
d1o6za2	161	d.162.1.1 (A:163-330) Malate dehydrogenase {Archae	4e-22
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	2e-20
d1llca2	172	d.162.1.1 (A:165-334) Lactate dehydrogenase {Lacto	1e-19
d1hyea1	145	c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydroge	8e-18
d1guza1	142	c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium	3e-17
d1o6za1	142	c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon	2e-16
d1hyha1	146	c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydro	1e-13
d1ojua1	142	c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon	2e-13
d1a5za1	140	c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermoto	2e-12
d1llda1	143	c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobac	4e-12
d1ez4a1	146	c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobac	7e-11
d1ldna1	148	c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus	8e-11
d1i0za1	160	c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Ho	1e-10
d1ojua2	152	d.162.1.1 (A:164-331) Lactate dehydrogenase {Archa	2e-10
d2ldxa1	159	c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mu	5e-10
d1y6ja1	142	c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridi	2e-09
d1uxja1	142	c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflex	2e-08
d1pzga1	154	c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplas	2e-07
d1u8xx1	167	c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase	2e-05
d1t2da1	150	c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria p	2e-04
d1up7a1	162	c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Ther	2e-04
d1s6ya1	169	c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Baci	0.004

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  169 bits (428), Expect = 2e-52
 Identities = 81/158 (51%), Positives = 119/158 (75%), Gaps = 2/158 (1%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
             KK V I+++GAAG I  +++F++A+G++ G+DQPI L+LL +  ++S +A++GV ME+
Sbjct: 20  SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS--ERSFQALEGVAMEL 77

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
           ED ++PLL +VS+  +P   F+D + A+LIG+ PR   MER+ LL IN  IF +QGKALN
Sbjct: 78  EDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALN 137

Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158
           +VAS++VKVLVVGNP NTN  I +K+APD+  KNF A+
Sbjct: 138 AVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHAL 175

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 188

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  159 bits (402), Expect = 2e-48
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 5/173 (2%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
           RLD NRA  +LA K       +  V +WGNHS +  PD+  A ++G  ++++I     W 
Sbjct: 2   RLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTK-WL 60

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGS-YN 276
           +  F   + +RG  +I   G SSAAS A +  D IK  +  T   +W + G+ + G+ Y 
Sbjct: 61  EEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYG 120

Query: 277 VPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
           + +DI+F  P +   +  Y++  ++  D F  ++I  S  EL  E   ++HL 
Sbjct: 121 IAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLT 173

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 179

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  144 bits (363), Expect = 7e-43
 Identities = 72/175 (41%), Positives = 102/175 (58%), Gaps = 6/175 (3%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRD---MINNNS 216
           RLDHNRA A++A KL      +K V +WGNHS + YPD  +A V              + 
Sbjct: 2   RLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDD 61

Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTEN--WVTMGIPSDG- 273
            W K  F+  + +RG  +I  R  SSA SAA A  DH++D  FGT    +V+MGI SDG 
Sbjct: 62  SWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGN 121

Query: 274 SYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
           SY VP D+++ FPV IK+  +KI++ L I+ FSR+K++L+ +EL  E  +    +
Sbjct: 122 SYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAFEFL 176

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  139 bits (352), Expect = 1e-41
 Identities = 92/156 (58%), Positives = 123/156 (78%), Gaps = 2/156 (1%)

Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLLE    ++ KA++GV+ME+E
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI--PQAMKALEGVVMELE 58

Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           DC FPLL  +   ++P  AFKDA+ A+L+G+ PRK+ MER +LL +N  IF EQG+AL  
Sbjct: 59  DCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118

Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA 157
           VA +DVKVLVVGNP NTN  I  K+AP L+ +NFTA
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTA 154

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 173

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  140 bits (353), Expect = 2e-41
 Identities = 77/172 (44%), Positives = 120/172 (69%), Gaps = 4/172 (2%)

Query: 158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSF 217
           M RLDHNRA A+LA K    V  I+++ VWGNHS +M+PD  +A V+G    ++++    
Sbjct: 1   MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME-- 58

Query: 218 WNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSY 275
           W + VF+P +++RG  II  RGASSAASAA+AAI+HI+DW  GT   +WV+M +PS G Y
Sbjct: 59  WYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEY 118

Query: 276 NVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
            +P+ I++ FPV  K+  Y++++ LEI++F+RK++ ++ +EL +E+  +  L
Sbjct: 119 GIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQVKAL 170

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  138 bits (348), Expect = 7e-41
 Identities = 75/155 (48%), Positives = 102/155 (65%), Gaps = 2/155 (1%)

Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
           +P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+         + GV+ME++DC
Sbjct: 2   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI--TPMMGVLDGVLMELQDC 59

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
             PLL DV   +    AFKD ++AIL+GS PR+  MER +LL  N  IF  QG AL+  A
Sbjct: 60  ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 119

Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158
            + VKV+VVGNP NTN     KSAP +  +NF+ +
Sbjct: 120 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCL 154

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

 Score =  126 bits (318), Expect = 2e-36
 Identities = 94/171 (54%), Positives = 129/171 (75%), Gaps = 2/171 (1%)

Query: 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW 218
           LRLDHNRA++++A+K  +PVSSI+K+FVWGNHS +MY DYRYA ++G  ++DMIN++++ 
Sbjct: 1   LRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWN 60

Query: 219 NKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNV 277
                 P + +RG  II  RG SSAASAA+AAIDHI DW+ GT   W TMGIPSDGSY +
Sbjct: 61  RDTFL-PTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGI 119

Query: 278 PKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
           P+ +IFGFPV  +N +YKI+Q L ID FS+++IN+++ EL  E   + HL+
Sbjct: 120 PEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQNGVQHLL 170

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

 Score =  109 bits (273), Expect = 1e-29
 Identities = 18/162 (11%), Positives = 46/162 (28%), Gaps = 1/162 (0%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD  R    +  +L     S    +V G H  S+   +    V  + +  +   N    
Sbjct: 4   NLDSARFRYLMGERLGVHSCSCH-GWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
               L          +      ++ +   +  D  +  +        +       Y +  
Sbjct: 63  DWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKD 122

Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           ++    P  + +     I  +++     +++  S   L +  
Sbjct: 123 NVFLSLPCVLNDHGISNIVKMKLKPNEEQQLQKSATTLWDIQ 164

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score =  107 bits (268), Expect = 6e-29
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 4/168 (2%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN---NNS 216
            LD  R    +A KL    SS    ++ G H  S    +    V GV ++++      ++
Sbjct: 4   NLDSARFRYLMAEKLGIHPSSCH-GWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDN 62

Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
                  +  +       +      +  +   +  D I+  +        +     G Y 
Sbjct: 63  DSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYG 122

Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
           +  ++    P  +       + N ++      ++  S + L +    +
Sbjct: 123 IENEVFLSLPCILNARGLTSVINQKLKDDEVAQLKKSADTLWDIQKDL 170

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  107 bits (267), Expect = 9e-29
 Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 4/168 (2%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN---NNS 216
            LD  R    +  KL    +S    +V G H  S  P +    V GV ++ +      + 
Sbjct: 4   NLDSARFRYLIGEKLGVNPTSCH-GWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62

Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
                  +      G   +      ++ +   +  D  +  +   +    +     G + 
Sbjct: 63  NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122

Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
           + +++    P  +  S       + +       +  S + L N   ++
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKVNMTAEEEGLLKKSADTLWNMQKNL 170

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 174

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score =  104 bits (261), Expect = 6e-28
 Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 3/169 (1%)

Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN- 219
           LD  R    +A  L+     ++   V G H   M P  RY TVNG  I+  I +      
Sbjct: 4   LDSGRFRRYVADALSVSPRDVQ-ATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62

Query: 220 -KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVP 278
                       G EI+   G  SA  A +A+   +       E  V             
Sbjct: 63  QLEEIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL 122

Query: 279 KDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           KD+  G P  I  +  + +  LE+++  +K+   S++++     +++ L
Sbjct: 123 KDMFIGLPAVIGGAGIERVIELELNEEEKKQFQKSVDDVMALNKAVAAL 171

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 170

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score =  103 bits (258), Expect = 1e-27
 Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSF-- 217
            LD  R    +A +    V ++   ++ G H  S  P +  AT+ GV + D         
Sbjct: 2   NLDSARLRFLIAQQTGVNVKNVH-AYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60

Query: 218 --WNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSY 275
              +K   +    +     I     ++  +   + +D I+  +  T   + +       +
Sbjct: 61  LDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFH 120

Query: 276 NVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
               DI    P  +         N  +       +  S E LK   
Sbjct: 121 -GISDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAETLKETA 165

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  103 bits (257), Expect = 2e-27
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 4/161 (2%)

Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
           LD  R  + +A +L   +  I    V G H  +M P  +Y TV G+ I D++        
Sbjct: 4   LDAARFRSFIAMELGVSMQDIN-ACVLGGHGDAMVPVVKYTTVAGIPISDLLPA---ETI 59

Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKD 280
           +  +      G EI+      SA  A ++++  + + I      V               
Sbjct: 60  DKLVERTRNGGAEIVEHLKQGSAFYAPASSVVEMVESIVLDRKRVLPCAVGLEGQYGIDK 119

Query: 281 IIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
              G PVK+  +  + I  + +D+     +  S + +    
Sbjct: 120 TFVGVPVKLGRNGVEQIYEINLDQADLDLLQKSAKIVDENC 160

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 99.6 bits (247), Expect = 6e-26
 Identities = 24/164 (14%), Positives = 56/164 (34%), Gaps = 4/164 (2%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SF 217
            LD  R    L    +    ++   ++ G H  +  P +  A +  + IR ++ +     
Sbjct: 2   ILDTARFRFLLGEYFSVAPQNVH-AYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60

Query: 218 WNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNV 277
                 +    R     I  +  ++    A   +  +   I   EN +            
Sbjct: 61  QKDLERIFVNVRDAAYQIIEKKGATYYGIA-MGLARVTRAILHNENAILTVSAYLDGLYG 119

Query: 278 PKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            +D+  G P  I  +  + +  +E++   + + + S   LK+ +
Sbjct: 120 ERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVL 163

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 98.4 bits (244), Expect = 2e-25
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 3/168 (1%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD  R    +A      +  ++   + G H  SM P     ++ G+ I+          
Sbjct: 4   HLDSLRFKVAIAKFFGVHIDEVR-TRIIGEHGDSMVPLLSATSIGGIPIQKFERFKELPI 62

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
             +      +   E I      S    A+A ++ ++  +   +  +T+    DG ++  +
Sbjct: 63  DEII--EDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIR 120

Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
           D+  G PVKI     + + ++E+DK        S E +K     + +L
Sbjct: 121 DVCIGVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKKYCEEVKNL 168

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 164

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score = 97.5 bits (242), Expect = 3e-25
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
           LD  R    +A +    V  ++   + G H   M P  R++T++G+ + + I   +    
Sbjct: 4   LDAARYRTFIAMEAGVSVKDVQ-AMLMGGHGDEMVPLPRFSTISGIPVSEFI---APDRL 59

Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKD 280
              +    + G EI+++    SA  A +AA   + + +   +  V              D
Sbjct: 60  AQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLND 119

Query: 281 IIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           I FG PV +     + I  L +++     +N S + ++  +
Sbjct: 120 IYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATL 160

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 95.3 bits (236), Expect = 2e-24
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 5/170 (2%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD  R    L+ KL   V ++   ++ G H  S  P +    + G  I + I++     
Sbjct: 2   VLDSIRFRYLLSEKLGVDVKNVH-GYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60

Query: 220 KNVFLPAISR---RGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
                  I+         I     ++    A +    ++  +       T+G   +G Y 
Sbjct: 61  TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYG 120

Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISH 326
           + +D+    P  + +   + +    +     + +  S E++K  +  + +
Sbjct: 121 I-EDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEVKN 169

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 94.9 bits (235), Expect = 3e-24
 Identities = 34/162 (20%), Positives = 53/162 (32%), Gaps = 1/162 (0%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD +R    L  + N    S+   ++ G H  S +  Y  AT+    +RD+       +
Sbjct: 2   SLDSSRLRVALGKQFNVDPRSVD-AYIMGEHGDSEFAAYSTATIGTRPVRDVAKEQGVSD 60

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
            ++       R +    I    +       A+  I   I   EN V              
Sbjct: 61  DDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGLN 120

Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
           DI  G P  I  +  K I    +     KK+  S   LK  +
Sbjct: 121 DIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKVL 162

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 94.9 bits (235), Expect = 3e-24
 Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 6/169 (3%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---S 216
            LD  R    +A        S+  V+V G H  S  P +  A + G+ +++M        
Sbjct: 3   VLDTARLRTLIAQHCGFSPRSVH-VYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61

Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
                 F     R   EII  +GA+    A + A+  I + IF  E  V         Y 
Sbjct: 62  SKILENFAEKTKRAAYEIIERKGAT--HYAIALAVADIVESIFFDEKRVLTLSVYLEDYL 119

Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
             KD+    PV +     + I  L +++   +    S   LKN I  I+
Sbjct: 120 GVKDLCISVPVTLGKHGVERILELNLNEEELEAFRKSASILKNAINEIT 168

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 93.6 bits (232), Expect = 9e-24
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 11/165 (6%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD  RA A +A       + +    + G+   ++ P     T      +D ++  +   
Sbjct: 3   TLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRI 62

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSYNV 277
           +          G E++  +  + +A+ + A       +           +   S      
Sbjct: 63  QE--------AGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQE 114

Query: 278 PKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
                F  P+ + K    K +   +I  F  K I  +I ELK  I
Sbjct: 115 TDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASI 159

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 165

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 93.0 bits (230), Expect = 1e-23
 Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 3/161 (1%)

Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN- 219
           LD +R    ++ KLN     +    + G H   M    RY TV G+ +++ INN    + 
Sbjct: 3   LDTSRLKYYISQKLNVCPRDVN-AHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
           +   +   +      I    AS   + A+A I+  + ++   +  +      +G Y    
Sbjct: 62  ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HS 120

Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNE 320
           DI  G PV +  +  + +  L+++   + K + +I E K  
Sbjct: 121 DIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRM 161

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 93.0 bits (230), Expect = 1e-23
 Identities = 22/169 (13%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD  R    +    +    S+   +  G H  S +  +    V G  I  + +     +
Sbjct: 3   LLDTARMQRAVGEAFDLDPRSVS-GYNLGEHGNSQFVAWSTVRVMGQPIVTLADAGD-ID 60

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
                    + G  +++ +G +S   A SA                        +     
Sbjct: 61  LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVM------ADAHAELVVSNRRDDM 114

Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
            +   +P  I          L++    ++K+  S + ++     I   +
Sbjct: 115 GMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQRFDEIVDTL 163

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 167

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 91.7 bits (227), Expect = 4e-23
 Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 12/165 (7%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
            LD  R+   +A    +    ++   + G+  +++ P                 + +   
Sbjct: 3   TLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQ---------VPGVSFTEQE 53

Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSYNV 277
                  I   G E++  +    +A+ +                +    +   +    + 
Sbjct: 54  VADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDG 113

Query: 278 PKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
                F  P+ + KN   +      +  F +  +   ++ LK +I
Sbjct: 114 QYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDI 158

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 90.1 bits (223), Expect = 9e-23
 Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 18/161 (11%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           ++++ GAAG IG  +   +      G +  +                 GV +++      
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLY---------DIAPVTPGVAVDLSHIPTA 52

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
           + +     E+   A + A++ ++     RK  M+RS+L  +N+ I     + +       
Sbjct: 53  VKIKGFSGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PK 111

Query: 127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI 167
             + ++ NPVNT   I          +        D N+  
Sbjct: 112 ACIGIITNPVNTTVAIA--------AEVLKKAGVYDKNKLF 144

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 161

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 88.7 bits (219), Expect = 4e-22
 Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 8/165 (4%)

Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
           LD  R    L+ + + PV +++   + G H  +  P +   +V+           S   K
Sbjct: 5   LDSARFRYVLSEEFDAPVQNVE-GTILGEHGDAQVPVFSKVSVD-----GTDPEFSGDEK 58

Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKD 280
              L  +     ++I  +GA+    A    + H+ + I      V             +D
Sbjct: 59  EQLLGDLQESAMDVIERKGATEWGPAR--GVAHMVEAILHDTGEVLPASVKLEGEFGHED 116

Query: 281 IIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
             FG PV + ++  + I   ++D + +  +  + E+L ++   IS
Sbjct: 117 TAFGVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 161

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 83.9 bits (207), Expect = 2e-20
 Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 21/162 (12%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           ++++ GA+G IG  +   + N  L+ +     L L +           GV  ++      
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSR-----LTLYDI------AHTPGVAADLSHIETR 50

Query: 67  LLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
             V   +  E      K  ++ ++    PRK  M R +L   N++I      A       
Sbjct: 51  ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACA-QHCP 109

Query: 126 DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI 167
           D  + ++ NPVN+   IT         + F      + N+  
Sbjct: 110 DAMICIISNPVNSTIPIT--------AEVFKKHGVYNPNKIF 143

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

 Score = 82.6 bits (203), Expect = 1e-19
 Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---S 216
            LD  R    +A  +N    S+   ++ G H  + +P + +A + GV I + +  +    
Sbjct: 2   SLDTARFRQSIAEMVNVDARSVH-AYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60

Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSY 275
                     +     EII ++GA+    A +     I   I   EN  + + +  DG Y
Sbjct: 61  EDKLVKMFEDVRDAAYEIIKLKGATFYGIATAL--ARISKAILNDENAVLPLSVYMDGQY 118

Query: 276 NVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
            +  D+  G P  I  +  + I  + +     + +  S  +LK  +
Sbjct: 119 GIN-DLYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVL 163

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 76.7 bits (188), Expect = 8e-18
 Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 12/142 (8%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +++I GA+G++G      +A    +     I         + S   ++G+  +I D +  
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLI-------GREHSINKLEGLREDIYDALAG 54

Query: 67  LLVDVSVH---ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
              D +++   +  +    ++++ I+    PRK  M R +L   N+ I  +  K +  + 
Sbjct: 55  TRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC 114

Query: 124 SRDVKVLVVGNPVNTNTYITMK 145
             D K+ V+ NPV+  TY  + 
Sbjct: 115 --DTKIFVITNPVDVMTYKALV 134

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score = 75.1 bits (184), Expect = 3e-17
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 11/152 (7%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +I++ GA G +G    FR+A        + +  +L+     +     K + M     +  
Sbjct: 2   KITVIGA-GNVGATTAFRLAE-------KQLARELVLLDVVEGIPQGKALDMYESGPVGL 53

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
               V    N      +++I I+    PRK  M R +LL  N+ I  E    +   +  +
Sbjct: 54  FDTKV-TGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-N 111

Query: 127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158
             ++VV NP++  T++    +  L  +    M
Sbjct: 112 PIIIVVSNPLDIMTHVAWVRS-GLPKERVIGM 142

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 73.1 bits (179), Expect = 2e-16
 Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 9/139 (6%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           ++S+ GAAG +G    + IA  D+  +     +  ++  +K+      G   +    I  
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADE-----VVFVDIPDKE--DDTVGQAADTNHGI-A 53

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
              +  V +        +++ ++    PR+    R +L   N+ I  +   +L+     D
Sbjct: 54  YDSNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-D 112

Query: 127 VKVLVVGNPVNTNTYITMK 145
              L   NPV+       +
Sbjct: 113 YISLTTSNPVDLLNRHLYE 131

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 65.5 bits (159), Expect = 1e-13
 Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 15/143 (10%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +I I G  G +G  +   +    +           ++A+  K    +K   ++ +D +  
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVAD-----DYVFIDANEAK----VKADQIDFQDAMAN 52

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSN----MERSELLAINSSIFIEQGKALNSV 122
           L    ++  N   A  DA++ I      +        +R   L   SS+    G  L   
Sbjct: 53  LEAHGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112

Query: 123 ASRDVKVLVVGNPVNTNTYITMK 145
                 ++V+ NPV+  T +   
Sbjct: 113 GF-HGVLVVISNPVDVITALFQH 134

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 64.7 bits (157), Expect = 2e-13
 Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 12/140 (8%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           ++   GA G++G    F       + +     + L++ +   +     G  M++      
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDE-----IALVDIAEDLAV----GEAMDLAHAAAG 51

Query: 67  LLVD-VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
           +      V     +  K + I ++     RK  M R +L   N+ I  +  K +   A  
Sbjct: 52  IDKYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP- 110

Query: 126 DVKVLVVGNPVNTNTYITMK 145
           + K+LVV NP++  TYI  K
Sbjct: 111 ESKILVVTNPMDVMTYIMWK 130

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 140

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.6 bits (149), Expect = 2e-12
 Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +I I G  G++G +  F +             + L++   K+++               P
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGF-----AREMVLIDVDKKRAEG-----DALDLIHGTP 50

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
                +++       K +++ I+    P+K    R +LL  N+ +  E  + ++  A  D
Sbjct: 51  FTRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-D 109

Query: 127 VKVLVVGNPVNTNTYITMKSA 147
             V+VV NPV+  TY  +K +
Sbjct: 110 SIVIVVTNPVDVLTYFFLKES 130

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 143

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score = 60.8 bits (147), Expect = 4e-12
 Identities = 23/141 (16%), Positives = 58/141 (41%), Gaps = 11/141 (7%)

Query: 5   PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI 64
           P ++++ GA G +G  + F  A   +  +     + L + + ++ +      +++++   
Sbjct: 1   PTKLAVIGA-GAVGSTLAFAAAQRGIARE-----IVLEDIAKERVEA----EVLDMQHGS 50

Query: 65  FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
                      +     +DA++ ++     +K    R EL+    +I       L  VA 
Sbjct: 51  SFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAP 110

Query: 125 RDVKVLVVGNPVNTNTYITMK 145
            +   +++ NPV+  T++  K
Sbjct: 111 -NAIYMLITNPVDIATHVAQK 130

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 57.3 bits (138), Expect = 7e-11
 Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 12/144 (8%)

Query: 2   LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
           +    ++ + G  G +G +  F +A   +  +       +++    +++       +++E
Sbjct: 2   MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEE-----FVIVDVVKDRTKGDA----LDLE 51

Query: 62  DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
           D          ++    +  KDA++ ++    P+K    R +L+  N +I     K +  
Sbjct: 52  DAQ-AFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD 110

Query: 122 VASRDVKVLVVGNPVNTNTYITMK 145
               D   LV  NPV+  TY T K
Sbjct: 111 SGF-DGIFLVAANPVDILTYATWK 133

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 148

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 57.4 bits (138), Expect = 8e-11
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 11/139 (7%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           R+ + GA G +G + +F + N  +   D+ +++         ++    G  M+       
Sbjct: 8   RVVVIGA-GFVGASYVFALMNQGIA--DEIVLI-------DANESKAIGDAMDFNHGKVF 57

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
               V +        +DA++ ++     +K    R +L+  N +IF    +++ + +   
Sbjct: 58  APKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQ 116

Query: 127 VKVLVVGNPVNTNTYITMK 145
              LV  NPV+  TY T K
Sbjct: 117 GLFLVATNPVDILTYATWK 135

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 160

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 1e-10
 Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 11/139 (7%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +I++ G  GQ+G      I    L  +     L L++    K +      +M+++     
Sbjct: 22  KITVVGV-GQVGMACAISILGKSLADE-----LALVDVLEDKLKG----EMMDLQHGSLF 71

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
           L     V +   +   ++ I ++     ++    R  L+  N ++F      +    S D
Sbjct: 72  LQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVK-YSPD 130

Query: 127 VKVLVVGNPVNTNTYITMK 145
             ++VV NPV+  TY+T K
Sbjct: 131 CIIIVVSNPVDILTYVTWK 149

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 152

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 56.5 bits (136), Expect = 2e-10
 Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 19/165 (11%)

Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
           LD  R   +L    N    +I++ ++ G H  SM+     A  +G +  + + N+     
Sbjct: 4   LDSQRLKERLY---NAGARNIRRAWIIGEHGDSMFVAKSLADFDGEVDWEAVEND----- 55

Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPK 279
                 +     E+I  +GA+    A   AI  +   +      +    +   G Y + +
Sbjct: 56  ------VRFVAAEVIKRKGATIFGPA--VAIYRMVKAVVEDTGEIIPTSMILQGEYGI-E 106

Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
           ++  G P K+  +  ++  ++++     +K+  S + L+  +  +
Sbjct: 107 NVAVGVPAKLGKNGAEVA-DIKLSDEEIEKLRNSAKILRERLEEL 150

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.0 bits (132), Expect = 5e-10
 Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 11/142 (7%)

Query: 4   KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
              +I++ G  G +G      I       K     L L++A   K    ++G  ++++  
Sbjct: 18  SRCKITVVGV-GDVGMACAISILL-----KGLADELALVDADTDK----LRGEALDLQHG 67

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
              L     V         ++ + I+       S   R +LL  N +I       +   +
Sbjct: 68  SLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS 127

Query: 124 SRDVKVLVVGNPVNTNTYITMK 145
             D K++VV NPV+  TY+  K
Sbjct: 128 P-DCKIIVVTNPVDILTYVVWK 148

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 12/139 (8%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +++I GA G +G +  F +A      +     L L++   +K+     G  M+I   + P
Sbjct: 3   KVAIIGA-GFVGASAAFTMALRQTANE-----LVLIDVFKEKA----IGEAMDINHGL-P 51

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
            +  +S++    +  KD ++ ++     RK    R +L   N  I  E  +         
Sbjct: 52  FMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQN-IMKYYNH 110

Query: 127 VKVLVVGNPVNTNTYITMK 145
             +LVV NPV+  TY+  K
Sbjct: 111 GVILVVSNPVDIITYMIQK 129

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 13/140 (9%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +ISI GA G +G      +A  +L        + LL+      Q    G  +++ +    
Sbjct: 3   KISIIGA-GFVGSTTAHWLAAKEL------GDIVLLDIVEGVPQ----GKALDLYEASPI 51

Query: 67  LLVDVSV-HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
              DV V   N      ++++ ++    PRK  M R +L+ +N+ I          ++  
Sbjct: 52  EGFDVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSP- 110

Query: 126 DVKVLVVGNPVNTNTYITMK 145
           +  +++V NP++  TY+  +
Sbjct: 111 NAVIIMVNNPLDAMTYLAAE 130

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 47.8 bits (113), Expect = 2e-07
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 15/150 (10%)

Query: 1   MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
           ++++  ++++ G+ G IG  + +  A  +L        + L +      +   K + +  
Sbjct: 3   LVQRRKKVAMIGS-GMIGGTMGYLCALRELAD------VVLYDVVKGMPE--GKALDLSH 53

Query: 61  EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRK-----SNMERSELLAINSSIFIEQ 115
              +    V V    +   A   A+  I+     +      S   R++LL  NS I  E 
Sbjct: 54  VTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREI 113

Query: 116 GKALNSVASRDVKVLVVGNPVNTNTYITMK 145
           G+ +         ++VV NP++    +  +
Sbjct: 114 GQNIKKY-CPKTFIIVVTNPLDCMVKVMCE 142

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 23/171 (13%)

Query: 3   KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
           KK   I I G        I+       L   ++  I +L    N K ++       ++  
Sbjct: 1   KKSFSIVIAGGGSTFTPGIVL----MLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFI 56

Query: 63  CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKA---- 118
                 ++ +   +P  AF D +  +      + +     E + +   +  ++       
Sbjct: 57  REKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGI 116

Query: 119 ---------LNSVASRDVK------VLVVGNPVNTNTYITMKSAPDLSYKN 154
                    +  +     K      +L   NP       T +  P+    N
Sbjct: 117 AYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILN 167

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 16/144 (11%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
           +I + G+ G IG  +   I   +L      ++L      +          +      +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNL----GDVVLF-----DIVKNMPHGKALDTSHTNVMA 54

Query: 67  LLVDVSVHENPITAFKDANIAILIGSFPRK-----SNMERSELLAINSSIFIEQGKALNS 121
                    N       A++ I+   F +          R +LL +N+ I IE G  +  
Sbjct: 55  YSNCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK 114

Query: 122 VASRDVKVLVVGNPVNTNTYITMK 145
               +  ++VV NPV+    +  +
Sbjct: 115 NCP-NAFIIVVTNPVDVMVQLLHQ 137

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 18/163 (11%), Positives = 45/163 (27%), Gaps = 29/163 (17%)

Query: 7   RISITGAAGQIGYNIIFRIANGDLLGKDQPII--LQLLEASNKKSQKAIKGVIMEIEDCI 64
           RI++ G  G      + +   G L   +   I  +   +   +K     + ++++    +
Sbjct: 2   RIAVIGG-GSSYTPELVK---GLLDISEDVRIDEVIFYDIDEEK-----QKIVVDFVKRL 52

Query: 65  FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA- 123
                 V + +    A  DA   I           E  E + +   +  ++   +   + 
Sbjct: 53  VKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSA 112

Query: 124 -----------------SRDVKVLVVGNPVNTNTYITMKSAPD 149
                            + +  ++   NP    T         
Sbjct: 113 ALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEY 155

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 169

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 16/165 (9%), Positives = 46/165 (27%), Gaps = 25/165 (15%)

Query: 6   VRISITGAAGQIGYNIIFRIANGDLLGKDQPII--LQLLEASNKKSQKAIKGVIMEIEDC 63
           ++I+  G  G      +     G +    +  +  L L++    K +  I G + +    
Sbjct: 2   LKIATIGG-GSSYTPELVE---GLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE 57

Query: 64  IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
              + +++ +  +   A   A+               + E + +   +  ++      + 
Sbjct: 58  KAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLF 117

Query: 124 SR-------------------DVKVLVVGNPVNTNTYITMKSAPD 149
                                D  ++   NP    T   ++    
Sbjct: 118 KGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ 162

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	329
d7mdha2	188	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	100.0
d5mdha2	179	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d1b8pa2	171	Malate dehydrogenase {Aquaspirillum arcticum [TaxI	100.0
d1y7ta2	173	Malate dehydrogenase {Thermus thermophilus [TaxId:	100.0
d1y6ja2	169	Lactate dehydrogenase {Clostridium thermocellum [T	100.0
d1i0za2	172	Lactate dehydrogenase {Human (Homo sapiens), heart	100.0
d1hyea2	168	MJ0490, lactate/malate dehydrogenase {Archaeon Met	100.0
d1uxja2	164	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	100.0
d1guza2	163	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	100.0
d1llda2	170	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1pzga2	174	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	100.0
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	100.0
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	100.0
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	100.0
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	100.0
d1ojua2	152	Lactate dehydrogenase {Archaeon Archaeoglobus fulg	100.0
d1hyha2	163	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	100.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	100.0
d1ez4a2	171	Lactate dehydrogenase {Lactobacillus pentosus [Tax	100.0
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	100.0
d1a5za2	172	Lactate dehydrogenase {Thermotoga maritima [TaxId:	100.0
d1ldma2	169	Lactate dehydrogenase {Dogfish (Squalus acanthias)	100.0
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	100.0
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	100.0
d1t2da2	165	Lactate dehydrogenase {Malaria parasite (Plasmodiu	100.0
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	100.0
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	100.0
d2ldxa2	172	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	100.0
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	100.0
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	99.98
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.98
d1ldna2	168	Lactate dehydrogenase {Bacillus stearothermophilus	99.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.97
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.97
d1llca2	172	Lactate dehydrogenase {Lactobacillus casei [TaxId:	99.97
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.97
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.97
d1o6za2	161	Malate dehydrogenase {Archaeon Haloarcula marismor	99.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.97
d1mlda2	169	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.96
d2cmda2	167	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.95
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	99.93
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	99.93
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	99.91
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	99.9
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	99.59
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	99.15
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	98.97
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.9
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.85
d1up7a2	253	6-phospho-beta-glucosidase {Thermotoga maritima [T	98.84
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.82
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.76
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.73
d1s6ya2	270	6-phospho-beta-glucosidase {Bacillus stearothermop	98.61
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.56
d1u8xx2	276	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	98.51
d1obba2	308	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	98.41
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.4
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	98.4
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.35
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	98.35
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.35
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.32
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.21
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.16
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	98.12
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	98.09
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	98.09
d1vjta2	278	Putative alpha-glucosidase TM0752 {Thermotoga mari	98.08
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.07
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	98.06
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.99
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	97.98
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	97.96
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.9
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	97.89
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	97.83
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.81
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.81
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.79
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.77
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.72
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.72
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.68
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.67
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.66
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.63
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.61
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.61
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.6
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.6
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.6
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.57
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	97.57
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.56
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.56
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.53
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.51
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.51
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.51
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.51
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.46
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.45
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.44
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.41
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.4
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.39
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.39
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	97.38
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.38
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.38
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.38
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.37
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.36
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.35
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.33
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.33
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.33
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.32
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.31
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.29
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.29
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.29
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.25
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.25
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.24
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.24
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	97.21
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.19
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.18
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.18
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.17
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.16
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.16
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.15
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	97.15
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.14
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.13
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.12
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.12
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.12
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.1
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.09
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.09
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	97.08
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	97.05
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.05
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.04
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.02
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.98
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.97
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.96
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.95
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.94
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	96.93
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.93
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.92
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.9
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.88
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.87
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.84
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.81
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.81
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.79
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.77
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.76
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.76
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.7
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.63
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.61
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.6
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.56
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	96.55
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.49
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.43
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.39
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	96.39
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.38
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.37
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.37
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	96.36
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.19
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.16
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.14
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.12
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.1
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	96.08
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.07
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	96.07
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.07
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	96.06
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.04
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.04
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.97
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.95
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	95.95
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	95.94
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.91
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.89
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	95.86
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.8
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	95.8
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.79
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.78
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.73
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	95.72
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	95.69
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.68
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.63
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.62
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.58
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.47
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	95.43
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.4
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.4
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.39
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.28
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.25
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.24
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.22
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.19
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.18
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.16
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.05
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.02
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.96
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.92
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.91
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.86
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.78
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	94.75
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.67
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	94.63
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.53
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.51
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.51
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.45
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.42
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.36
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.32
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.32
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	94.3
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.15
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.14
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.09
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	94.06
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.02
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.01
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.0
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.99
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.96
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.92
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.91
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	93.8
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.73
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	93.72
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.67
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.66
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	93.65
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	93.61
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.59
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	93.55
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	93.41
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.35
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.3
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	93.23
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.0
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.96
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	92.95
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.94
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.88
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	92.81
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	92.78
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.74
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.74
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	92.71
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	92.6
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	92.56
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	92.45
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.42
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.41
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.33
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.02
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	91.81
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.67
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.66
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	91.6
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.38
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.0
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	90.91
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	90.82
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.78
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	90.68
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.62
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.43
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.34
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	90.33
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.96
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	89.8
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	89.55
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.37
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.25
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	89.25
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	89.22
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	89.21
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.18
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	89.1
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	88.99
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.99
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	88.98
d2b0ja2	242	5,10-methenyltetrahydromethanopterin hydrogenase,	88.88
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.83
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	88.67
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.43
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	88.42
d1z2aa1	164	Rab23 {Mouse (Mus musculus) [TaxId: 10090]}	88.34
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	88.31
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	88.28
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.04
d1ekxa2	160	Aspartate carbamoyltransferase catalytic subunit {	88.01
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	87.22
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	86.54
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.34
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.32
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.28
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	85.67
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	85.25
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.23
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	84.43
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.38
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.09
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	83.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	83.3
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	83.25
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	82.89
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	82.78
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.54
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.47
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	82.34
d1z0ja1	167	Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}	81.84
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.7
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	81.61
d1tuga1	310	Aspartate carbamoyltransferase catalytic subunit {	81.14
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.93
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	80.79
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	80.66
d1r2qa_	170	Rab5a {Human (Homo sapiens) [TaxId: 9606]}	80.06
d2a5ja1	173	Rab2b {Human (Homo sapiens) [TaxId: 9606]}	80.03

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=100.00  E-value=2.4e-38  Score=268.92  Aligned_cols=168  Identities=30%  Similarity=0.548  Sum_probs=153.8

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhc
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIR  238 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~k  238 (329)
                      |.||++||++++|+++|++|++|++++||||||++|||+||+++++|.|+.+++++. .|..+++.+.++++++++++.|
T Consensus         1 T~LDs~R~r~~lA~~l~V~~~~V~~~iI~GeHGds~vp~~S~a~v~g~~l~~~~~~~-~~~~~~~~~~v~~~~~~ii~~k   79 (188)
T d7mdha2           1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRT-KWLEEEFTITVQKRGGALIQKW   79 (188)
T ss_dssp             CHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSSTTCEEECSSCEETTEEGGGTCCCH-HHHHHHHHHHHHTHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHHCcCHHHeeEEEEEEcCCCcEeeeeeccEeeccchhhcccch-hhhHHHHHHHHhhhHHHHHHhh
Confidence            689999999999999999999999988999999999999999999999999998776 6778899999999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         239 GASSAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       239 g~~~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      |+++++++|.|++ .++++|.++  + .++|++++++|+ ||+|+|+|||+||++ ++|+++++.+++|+++|+++|++|
T Consensus        80 g~s~~~s~A~A~~-~~~~ai~~~~~~~~~~s~~v~~~g~~YGi~~~v~~s~Pv~ig~~G~~~iv~~l~L~~~e~~~l~~S  158 (188)
T d7mdha2          80 GRSSAASTAVSIA-DAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKS  158 (188)
T ss_dssp             SSCCHHHHHHHHH-HHHHHHHSCCCTTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHHHH
T ss_pred             cccchhhHHHHHH-HHHHHHHcCCCCCceEEEEEEeCCCccCCCCCeEEEEeeEECCCccEEEeCCCCCCHHHHHHHHHH
Confidence            9999987777655 666666654  4 799999999996 999999999999999 999999987799999999999999


Q ss_pred             HHHHHHHHHHHHhhh
Q psy9582         314 IEELKNEILSISHLI  328 (329)
Q Consensus       314 ~~~i~~~~~~~~~~~  328 (329)
                      +++|+++.+.+.+||
T Consensus       159 ~~eL~~e~~~v~~Ll  173 (188)
T d7mdha2         159 EAELLAEKKCVAHLT  173 (188)
T ss_dssp             HHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999888876

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4.9e-36  Score=253.80  Aligned_cols=168  Identities=39%  Similarity=0.574  Sum_probs=147.6

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc---cchhhhHHHHHhhhhHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS---FWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~---~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.||++||++++|+++|++|++|++++|||+||+++||+||+++++|+|+.+++.+.+   .+..+++.+.+++++.+|+
T Consensus         1 T~LDs~R~r~~la~~l~V~~~~V~~~vI~GeHG~s~vp~~S~a~v~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~   80 (179)
T d5mdha2           1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVI   80 (179)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCHHHcEEEEEEEcCCCcccccchhceecCcchhhhhhhccccchhhHHHHHHHHHhccHhhh
Confidence            6899999999999999999999999888999999999999999999999876653321   3567889999999999999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCC-CCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDG-SYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI  310 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l  310 (329)
                      ..||++++++.|++++ .++++|..+  + .+++++++++| +||+|+|+|||+||++ ++|+.++.+ ++|+++|+++|
T Consensus        81 ~~~~~ss~~~~a~a~~-~~~~~i~~~~~~~~~~s~~v~~~g~~yGi~~~v~~s~P~~lg~~Gv~~v~~-l~L~~~E~~~l  158 (179)
T d5mdha2          81 KARKLSSAMSAAKAIC-DHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG-LPINDFSREKM  158 (179)
T ss_dssp             HHHSSCCCHHHHHHHH-HHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCC-CCCCHHHHHHH
T ss_pred             hccCcchHHHHHHHHH-HHHHHHHhhcccCCceeEEEEccCcccCCccceEEeeeEEEcCCcEEEEeC-CCCCHHHHHHH
Confidence            9888777656565555 666666643  5 88899999998 7999999999999999 999999998 99999999999


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q psy9582         311 NLSIEELKNEILSISHLI  328 (329)
Q Consensus       311 ~~s~~~i~~~~~~~~~~~  328 (329)
                      ++|+++|+++++.+.++|
T Consensus       159 ~~Sa~~L~~~~~~~~~~l  176 (179)
T d5mdha2         159 DLTAKELAEEKETAFEFL  176 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999999987

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

Probab=100.00  E-value=3.1e-35  Score=247.25  Aligned_cols=167  Identities=55%  Similarity=1.025  Sum_probs=153.0

Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcC
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRG  239 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg  239 (329)
                      .||++||++++|+++|++|++|++++|||+||++++|+||+++++|.|+.++..+. .+..+++.+.+++++..+...++
T Consensus         2 ~LD~~R~r~~lA~kl~v~~~~V~~~iI~GehG~s~vp~~S~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   80 (171)
T d1b8pa2           2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDD-AWNRDTFLPTVGKRGAAIIDARG   80 (171)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTTCEEECSSCEETTEEHHHHHCCH-HHHHHTHHHHHHTHHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHCcCHHHeEEEEEEEcCCCcEEeeeecceeecccchhhhhhh-cchhhhHHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999988999999999999999999999999988765 55667777788888888888888


Q ss_pred             CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582         240 ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL  317 (329)
Q Consensus       240 ~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  317 (329)
                      .+++.+++++++..+.+++.+++ .++|++++++|+||+|+|+|||+||++ ++|++.+.+ ++|+++|+++|++|+++|
T Consensus        81 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~s~~~~g~yg~~~gi~fS~Pv~ig~~gve~v~~-l~L~~~e~~~l~~s~~~L  159 (171)
T d1b8pa2          81 VSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQG-LSIDAFSQERINVTLNEL  159 (171)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCCTTCCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCC-CCCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhCCCccceeEEEEeccccccccceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHH
Confidence            88887777667778999999998 999999999999999999999999999 999999887 999999999999999999


Q ss_pred             HHHHHHHHhhh
Q psy9582         318 KNEILSISHLI  328 (329)
Q Consensus       318 ~~~~~~~~~~~  328 (329)
                      +++++.+.++|
T Consensus       160 ~~e~~~v~~ll  170 (171)
T d1b8pa2         160 LEEQNGVQHLL  170 (171)
T ss_dssp             HHHHHHHGGGG
T ss_pred             HHHHHHHHHhc
Confidence            99999999987

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.6e-34  Score=241.97  Aligned_cols=168  Identities=45%  Similarity=0.882  Sum_probs=134.0

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      +|.|||+||++++|++++++|++|++++|||+||++++|+||+++++|.|+.++..+. .+. ++..++..+++.+++..
T Consensus         1 ~T~LDs~R~r~~lA~~l~v~~~~V~~~iI~GeHG~s~vp~~S~~~v~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~   78 (173)
T d1y7ta2           1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME-WYE-KVFIPTVAQRGAAIIQA   78 (173)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECSSCEETTEEGGGTSCHH-HHH-HTHHHHHHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHCcCHHHcEEEEEEEecCccEEeeeeeeeEcCccHHHhcccc-ccc-chhhhhhhhhHHHHHHH
Confidence            5899999999999999999999999988899999999999999999999999887654 233 34444444445555544


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhC-CC-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFG-TE-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~-~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ++.+++.+.|.+++..+..++.. |+ +++|++++++|+||+|+++|+|+||++++|.++++++++||++|+++|++|++
T Consensus        79 ~~~~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~v~~~g~YGi~~~~~~s~Pvi~~~gg~~~v~~l~L~~~E~~~l~~s~~  158 (173)
T d1y7ta2          79 RGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQ  158 (173)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHH
T ss_pred             hccCchhhHHHHHHHHHHHHhcccCCCCceeeEEEeccccCCccceeEeeeEEEeCCeEEEecCCCCCHHHHHHHHHHHH
Confidence            44445544455555444444443 56 99999999999999999999999998855655655559999999999999999


Q ss_pred             HHHHHHHHHHhh
Q psy9582         316 ELKNEILSISHL  327 (329)
Q Consensus       316 ~i~~~~~~~~~~  327 (329)
                      +|++.++.+.++
T Consensus       159 ~L~~~~e~vk~l  170 (173)
T d1y7ta2         159 ELLDEMEQVKAL  170 (173)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999987764

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=100.00  E-value=5.8e-35  Score=245.04  Aligned_cols=163  Identities=20%  Similarity=0.323  Sum_probs=144.3

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc----cchhhhHHHHHhhhhHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS----FWNKNVFLPAISRRGEEI  234 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~----~~~~~~l~~~v~~~~~~i  234 (329)
                      |+||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++.+..    .+..+++.+++++.++++
T Consensus         1 T~LDs~R~~~~la~~lgv~~~~V~~~-ViG~Hg~t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (169)
T d1y6ja2           1 TVLDSIRFRYLLSEKLGVDVKNVHGY-IIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATI   79 (169)
T ss_dssp             THHHHHHHHHHHHTTTTCCTTTEECC-EEBCSSSSCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHceEE-EEccCCCCCccCeeecccCchhHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhh
Confidence            78999999999999999999999988 8999999999999999999999998876531    235578888899999999


Q ss_pred             HHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582         235 ISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL  312 (329)
Q Consensus       235 ~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~  312 (329)
                      ++.+|.+.|+.++  ++..+++++.+|+ .++|++++++|+||+| |+|||+||++ ++|++++++ ++|+++|+++|++
T Consensus        80 ~~~~~s~~~a~a~--~~~~~~~~i~~~~~~~~~~~~~~~g~yg~~-~i~~s~Pv~lg~~Gv~~i~~-l~Ls~~E~~~l~~  155 (169)
T d1y6ja2          80 IKNKGATYYGIAV--SINTIVETLLKNQNTIRTVGTVINGMYGIE-DVAISLPSIVNSEGVQEVLQ-FNLTPEEEEALRF  155 (169)
T ss_dssp             HHHTSCCCHHHHH--HHHHHHHHHHHTCCCEECCEEEECSBTTBC-SEEEECCEEEETTEEEECCC-CCCCHHHHHHHHH
T ss_pred             hhhhhhhhhHHHH--HHHHHHHHhccCCCCceeeeeeeccccCCc-ccceeeeeEEcCCcEEEEec-CCCCHHHHHHHHH
Confidence            9999988886665  3558999999998 9999999999999995 9999999999 999999998 9999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q psy9582         313 SIEELKNEILSISH  326 (329)
Q Consensus       313 s~~~i~~~~~~~~~  326 (329)
                      |++.|++.++.++|
T Consensus       156 s~~~lk~~~~~vk~  169 (169)
T d1y6ja2         156 SAEQVKKVLNEVKN  169 (169)
T ss_dssp             HHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHhhC
Confidence            99999999988653

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=100.00  E-value=1.8e-34  Score=242.71  Aligned_cols=164  Identities=15%  Similarity=0.178  Sum_probs=146.8

Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc----cchhhhHHHHHhhhhH
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS----FWNKNVFLPAISRRGE  232 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~----~~~~~~l~~~v~~~~~  232 (329)
                      +||.||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++.+..    .+..+++.+.+++++.
T Consensus         1 ~GT~LDs~R~~~~lA~~lgv~~~~V~~~-ViG~Hg~~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   79 (172)
T d1i0za2           1 SGCNLDSARFRYLMAEKLGIHPSSCHGW-ILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY   79 (172)
T ss_dssp             CTTHHHHHHHHHHHHHHHTSCGGGCBCC-EEBCSSTTCEECGGGCEETTEEHHHHCTTTTSSSCSSCTHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHhCcCHHHceEE-EEccCCCcccccHhhceeCCeeHHHhhhhhccchhHHHHHHHHHHhccceE
Confidence            4799999999999999999999999877 8999999999999999999999998875530    2345778888999999


Q ss_pred             HHHHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582         233 EIISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI  310 (329)
Q Consensus       233 ~i~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l  310 (329)
                      +++..++.+.++.++  ++..++.++.+++ .++|++++++|+||+|+++|||+||++ ++|++++++ ++|+++|+++|
T Consensus        80 ~~~~~~~~s~~a~a~--~~~~~~~~~~~~~~~v~~~~~~~~g~YGi~~~i~~s~Pv~lg~~Gv~~v~~-l~L~~~E~~~l  156 (172)
T d1i0za2          80 EVIKLKGYTNWAIGL--SVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVIN-QKLKDDEVAQL  156 (172)
T ss_dssp             HHHHHHSSCCHHHHH--HHHHHHHHHHTTCCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             EeeecccccchHHHH--HHHHHHHHHhcCCCcccccceeccCcCCCcCCEEEEEEEEecCCcEEEEeC-CCCCHHHHHHH
Confidence            999999988876654  3458899999998 999999999999999999999999999 999999998 99999999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy9582         311 NLSIEELKNEILSI  324 (329)
Q Consensus       311 ~~s~~~i~~~~~~~  324 (329)
                      ++|+++|++.++.+
T Consensus       157 ~~Sa~~l~~~~~~l  170 (172)
T d1i0za2         157 KKSADTLWDIQKDL  170 (172)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999887654

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=1.1e-34  Score=243.19  Aligned_cols=165  Identities=23%  Similarity=0.347  Sum_probs=142.1

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      ||+||++||++++|+++|++|.+|+++ |||+||++++|+||+++++|+|+.++.... .+..+++.++++++++.++..
T Consensus         2 GT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   79 (168)
T d1hyea2           2 GTHLDSLRFKVAIAKFFGVHIDEVRTR-IIGEHGDSMVPLLSATSIGGIPIQKFERFK-ELPIDEIIEDVKTKGEQIIRL   79 (168)
T ss_dssp             TTHHHHHHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEETTEEGGGCGGGG-GCCHHHHHHHHHHHTTSCCC-
T ss_pred             CchHHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCccccchhheeECCEecccccccc-hhhhhhHHHHHhhhHHHHHHh
Confidence            689999999999999999999999988 899999999999999999999999877554 456678888999988888888


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      +|.++++.+++  +..+++++.++. .++++++++.|+|+.++|+|||+||++ ++|++++++ ++||++|+++|++|++
T Consensus        80 k~~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~Pv~lg~~Gv~~i~~-l~Ls~~E~~~l~~Sa~  156 (168)
T d1hyea2          80 KGGSEFGPAAA--ILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVS-IELDKDEIIAFRKSAE  156 (168)
T ss_dssp             -----CCHHHH--HHHHHHHHHTTCCEEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             ccCccccchhh--hhHHHHhhhccCCCeEEEEEEEecccCCcCCEEEeeceEEcCCcEEEEec-CCCCHHHHHHHHHHHH
Confidence            88777655543  347788888876 899999999888877799999999999 999999998 9999999999999999


Q ss_pred             HHHHHHHHHHhh
Q psy9582         316 ELKNEILSISHL  327 (329)
Q Consensus       316 ~i~~~~~~~~~~  327 (329)
                      .|++.++.++++
T Consensus       157 ~lk~~~~~~k~l  168 (168)
T d1hyea2         157 IIKKYCEEVKNL  168 (168)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHhcC
Confidence            999999998875

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=100.00  E-value=1.2e-34  Score=241.76  Aligned_cols=157  Identities=22%  Similarity=0.377  Sum_probs=141.8

Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh--
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI--  237 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~--  237 (329)
                      +||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++.+.   ..+++.+.++++++++++.  
T Consensus         3 ~LD~~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~v~~~s~~~i~g~~~~~~~~~~---~~~~~~~~v~~~g~~ii~~~~   78 (164)
T d1uxja2           3 VLDAARYRTFIAMEAGVSVKDVQAM-LMGGHGDEMVPLPRFSTISGIPVSEFIAPD---RLAQIVERTRKGGGEIVNLLK   78 (164)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEEC-CEECSGGGEECCGGGEEETTEEGGGTSCHH---HHHHHHHHHHTHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCceeeeeeeeecCCCchhhccchh---hHHHHHHHHHHHHHHHHHHHh
Confidence            6999999999999999999999988 899999999999999999999999887544   6788999999999999764  


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||.+.++.+  +++.++++|+.+|+ .++|++++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus        79 kgs~~~a~a--~a~~~i~~~i~~~~~~~~~~~~~~~g~ygi-~~~~~s~P~~ig~~Gv~~v~~-l~L~~~E~~~l~~s~~  154 (164)
T d1uxja2          79 TGSAYYAPA--AATAQMVEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILE-LPLNEEEMALLNASAK  154 (164)
T ss_dssp             SSCCCHHHH--HHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             cCcccchHH--HHHHHHHHHHhCCCCceeeeeeeeccccCC-CCceEEECeEEeCCeeEEEeC-CCCCHHHHHHHHHHHH
Confidence            454444443  35679999999998 999999999999999 68999999999 999999998 9999999999999999


Q ss_pred             HHHHHHHHH
Q psy9582         316 ELKNEILSI  324 (329)
Q Consensus       316 ~i~~~~~~~  324 (329)
                      +|++.++.+
T Consensus       155 ~lk~~i~~l  163 (164)
T d1uxja2         155 AVRATLDTL  163 (164)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999999865

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=100.00  E-value=1.9e-34  Score=240.37  Aligned_cols=156  Identities=22%  Similarity=0.357  Sum_probs=140.8

Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh--
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI--  237 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~--  237 (329)
                      +||++||++++|++++++|++|+++ |||+||++++|+||+++++|.|+.++++++   ..+++.++++++++++++.  
T Consensus         3 ~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~s~vp~~s~~~i~g~~~~~~~~~~---~~~~~~~~v~~~g~~ii~~~~   78 (163)
T d1guza2           3 VLDAARFRSFIAMELGVSMQDINAC-VLGGHGDAMVPVVKYTTVAGIPISDLLPAE---TIDKLVERTRNGGAEIVEHLK   78 (163)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECGGGCEETTEEHHHHSCHH---HHHHHHHHHHTHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCCcccCHhhcccCCccccccCCHH---HHHHHHHHHHHHHHHHHHHhc
Confidence            7999999999999999999999988 899999999999999999999999987654   5678999999999999875  


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      +|.+.++.++  ++.++++++.+++ .++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus        79 kgsa~~a~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~g~-~~~~~s~P~~lg~~Gv~~i~~-l~Ls~~E~~~l~~sa~  154 (163)
T d1guza2          79 QGSAFYAPAS--SVVEMVESIVLDRKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYE-INLDQADLDLLQKSAK  154 (163)
T ss_dssp             SSCCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CCCcchhHHH--HHHHHHHheeccCCCEEEEeeeeccccCC-CCcEEEEeeEEcCCeeEEEec-CCCCHHHHHHHHHHHH
Confidence            4555554443  4568999999998 999999999999999 69999999999 999999998 9999999999999999


Q ss_pred             HHHHHHHH
Q psy9582         316 ELKNEILS  323 (329)
Q Consensus       316 ~i~~~~~~  323 (329)
                      .|++.++.
T Consensus       155 ~l~~~i~~  162 (163)
T d1guza2         155 IVDENCKM  162 (163)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhh
Confidence            99998864

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=6.5e-34  Score=238.84  Aligned_cols=160  Identities=18%  Similarity=0.180  Sum_probs=144.3

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc-----cchhhhHHHHHhhhhHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS-----FWNKNVFLPAISRRGEE  233 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~-----~~~~~~l~~~v~~~~~~  233 (329)
                      |+||++||++++|+++|+++++|+++ |||+||++++|+||+++++|.|+.+++...+     .+..+++.+.+++++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~g~~   79 (170)
T d1llda2           1 TNLDSARLRFLIAQQTGVNVKNVHAY-IAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYK   79 (170)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCCcccchhhcccCCCchhhhcccccccccchhhHHHHHHHHhhhhhH
Confidence            78999999999999999999999987 8999999999999999999999998875431     24567899999999999


Q ss_pred             HHHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHH
Q psy9582         234 IISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKIN  311 (329)
Q Consensus       234 i~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~  311 (329)
                      |++.||.+++++++.  +..++.++..|. .+++++++++|+||. +|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus        80 i~~~kg~t~~~~a~~--~~~~~~~i~~~~~~~~~~~~~~~~~~g~-~~i~~s~P~~lg~~Gv~~i~~-l~L~~~E~~~l~  155 (170)
T d1llda2          80 IINGKGATNYAIGMS--GVDIIEAVLHDTNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTIN-TPVSDKELAALK  155 (170)
T ss_dssp             HHTSCCSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEECSSBTTB-CSSEEEEEEEEETTEEECCSC-CCCCHHHHHHHH
T ss_pred             HHhhhccchhhhHHH--HHHHHHHHHcCCCceeeeeccccCccCC-CCeeEeeccEEcCCeeEEEec-CCCCHHHHHHHH
Confidence            999999988876653  347888998887 999999999999998 69999999999 999999998 999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         312 LSIEELKNEILS  323 (329)
Q Consensus       312 ~s~~~i~~~~~~  323 (329)
                      +|++.||+.++.
T Consensus       156 ~sa~~lk~~~~~  167 (170)
T d1llda2         156 RSAETLKETAAQ  167 (170)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH
Confidence            999999998754

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=100.00  E-value=4.6e-34  Score=240.64  Aligned_cols=165  Identities=23%  Similarity=0.331  Sum_probs=140.1

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc--cchhhhHHHHHhhhhHHHH
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS--FWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~--~~~~~~l~~~v~~~~~~i~  235 (329)
                      ||+||++||++++|+++|++|++|+++ ||||||++++|+||+++++|.|+.+++.+..  .....+.....+.++.++.
T Consensus         1 ~c~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~t~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   79 (174)
T d1pzga2           1 ACMLDSGRFRRYVADALSVSPRDVQAT-VIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIV   79 (174)
T ss_dssp             CHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhCcCHHHcEEE-EEccCCCccccceeeeeECCEechhhccccchhhhhhhhhhheeeccceeEe
Confidence            689999999999999999999999877 8999999999999999999999998876541  1233444445556666665


Q ss_pred             H--hcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHH
Q psy9582         236 S--IRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKIN  311 (329)
Q Consensus       236 ~--~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~  311 (329)
                      .  .+|.+.++.++  ++.++++++++|+ .+++++++++|+||++ ++|||+||++ ++|++++++ ++|+++|+++|+
T Consensus        80 ~~~~~gst~~~~a~--a~~~~~~~i~~~~~~~~~~s~~~~~~yGi~-~v~~s~Pv~ig~~Gi~~v~~-l~l~~~E~~~l~  155 (174)
T d1pzga2          80 RFLGQGSAYYAPAA--SAVAMATSFLNDEKRVIPCSVYCNGEYGLK-DMFIGLPAVIGGAGIERVIE-LELNEEEKKQFQ  155 (174)
T ss_dssp             HHHSSSCCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             eeecccchhhhhHH--HHHHHHHhhcccCCceEEeeeccccccCCC-CceeeeeeEEcCCcEEEEeC-CCCCHHHHHHHH
Confidence            4  55655565544  4558999999998 9999999999999995 8999999999 999999998 999999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q psy9582         312 LSIEELKNEILSISHL  327 (329)
Q Consensus       312 ~s~~~i~~~~~~~~~~  327 (329)
                      +|+++|++..+.+.++
T Consensus       156 ~s~~~l~~~~~~v~~l  171 (174)
T d1pzga2         156 KSVDDVMALNKAVAAL  171 (174)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999998887765

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=100.00  E-value=5.3e-34  Score=239.30  Aligned_cols=155  Identities=52%  Similarity=0.873  Sum_probs=143.2

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |+++.||+|+||+|++|+++++.|+++++++.+++++|+|+|++  +..+.+++.++|++|++.+....+.++++.++++
T Consensus        21 ~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~--~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~   98 (175)
T d7mdha1          21 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSE--RSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF   98 (175)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred             cCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCc--cccchhcchhhhhcccccccccCccccccchhhc
Confidence            45678999999999999999999999999998888899999998  4456788999999998877777888899999999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      +|+|+||+++|.||+|||+|.|++..|++++++++++|.+||+++++|+++|||+|++|+++++++|++|++||.++
T Consensus        99 ~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~NPvd~~t~ia~k~a~~ip~~~i~~m  175 (175)
T d7mdha1          99 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHAL  175 (175)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEEC
T ss_pred             cCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecCcHHHHHHHHHHHCCCCCHHHEeCC
Confidence            99999999999999999999999999999999999999999866999999999999999999999889999999874

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=4.3e-34  Score=234.04  Aligned_cols=146  Identities=21%  Similarity=0.288  Sum_probs=132.5

Q ss_pred             CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      |++ .+.||+|||| |+||+++|+.|+..++++     ||+|+|++    +++++|.++|+.|........+.++++.++
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~-----el~L~Di~----~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~   70 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIAD-----EIVLIDAN----ESKAIGDAMDFNHGKVFAPKPVDIWHGDYD   70 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHHHTTSSSSCCEEEECCGG
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCc-----eEEEEeec----cccccchhccHhhCccccCCCeEEEECCHH
Confidence            444 3589999998 999999999999999987     99999999    788999999999976433345666677799


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      +++|||+||+++|.+++++++|.+++.+|+++++++++.|.++| |+++++++|||+|++|+++++++ |||++||+|.
T Consensus        71 ~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~~ivvtNPvd~~t~~~~k~s-g~p~~rViG~  147 (148)
T d1ldna1          71 DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVDILTYATWKFS-GLPHERVIGS  147 (148)
T ss_dssp             GTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHHH-TCCGGGEEEC
T ss_pred             HhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhC-CCceEEEecCccHHHHHHHHHHH-CcChhheecC
Confidence            99999999999999999999999999999999999999999997 99999999999999999999999 9999998764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=100.00  E-value=9.2e-34  Score=229.61  Aligned_cols=142  Identities=18%  Similarity=0.288  Sum_probs=128.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||+||||+|++|+++|+.|+.+++++     ||+|+|++  ..++.++++++|++|.. ++....+++++.+++++|||
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~-----el~L~Di~--~~~~~~~g~a~Dl~~~~-~~~~~~~i~~~~~~~~~~aD   72 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIAD-----EVVFVDIP--DKEDDTVGQAADTNHGI-AYDSNTRVRQGGYEDTAGSD   72 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCS-----EEEEECCG--GGHHHHHHHHHHHHHHH-TTTCCCEEEECCGGGGTTCS
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCC-----EEEEEecC--Ccccccceeecchhhcc-cccCCceEeeCCHHHhhhcC
Confidence            489999977999999999999999987     99999986  22566789999999965 44445566677799999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      +||+++|.|+++|++|.+++..|++++++++++|.+++ |+++++++|||+|+|++++++.+ |||++||+|
T Consensus        73 iVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvtNPvDvmt~~~~k~s-g~~~~rViG  142 (142)
T d1o6za1          73 VVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVDLLNRHLYEAG-DRSREQVIG  142 (142)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHHHHHHHHHHHS-SSCGGGEEE
T ss_pred             EEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC-CCceEEEecChHHHHHHHHHHHH-CcCcccccC
Confidence            99999999999999999999999999999999999997 99999999999999999999999 999999865

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=1.6e-33  Score=228.76  Aligned_cols=140  Identities=18%  Similarity=0.332  Sum_probs=127.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~   82 (329)
                      |.||+|||| |+||+++|+.|+..++++     ||+|+|++    +++++|+++|++|.. .+.  ..+. .++.+++++
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~~-----ElvL~D~~----~~~~~g~a~Dl~~a~-~~~~~~~i~-~~~~~~~~~   68 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIAR-----EIVLEDIA----KERVEAEVLDMQHGS-SFYPTVSID-GSDDPEICR   68 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS----HHHHHHHHHHHHHTG-GGSTTCEEE-EESCGGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCc-----EEEEEEec----cccchhHHHHHHhcc-ccCCCceee-cCCCHHHhh
Confidence            579999998 999999999999999988     99999999    788999999999975 333  2333 345589999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      |||+||+++|.++++|++|.+++..|+++++++++.|.+++ |++++|++|||+|+||+++++.+ ++|++|++|.
T Consensus        69 daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~-p~ai~ivvtNPvDvmt~~~~~~s-g~p~~rViG~  142 (143)
T d1llda1          69 DADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIYMLITNPVDIATHVAQKLT-GLPENQIFGS  142 (143)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHHH-TCCTTSEEEC
T ss_pred             CCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhC-CCeEEEEeCCchHHHHHHHHHHH-CCChhhccCC
Confidence            99999999999999999999999999999999999999997 99999999999999999999999 9999997764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.7e-34  Score=229.80  Aligned_cols=139  Identities=22%  Similarity=0.397  Sum_probs=129.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||| |++|+++++.|+..++.+     ||+|+|++    ++++++.++|+.|.. ++.....++++.+++++|||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~-----el~L~Di~----~~~~~g~~~Dl~~~~-~~~~~~~~~~~~~~~~~~ad   69 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAR-----EMVLIDVD----KKRAEGDALDLIHGT-PFTRRANIYAGDYADLKGSD   69 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHHHG-GGSCCCEEEECCGGGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCC-----EEEEEecc----cccccchhccccccc-cccccccccCCcHHHhcCCC
Confidence            69999998 999999999999999987     99999999    788999999999975 44455666677799999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      +||+++|.++++|++|.+++.+|+++++++++.|.++| |+++++++|||+|+||+++++.+ +||++|++|
T Consensus        70 ivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~-p~aivivvtNPvd~~t~~~~k~s-g~p~~rViG  139 (140)
T d1a5za1          70 VVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVLTYFFLKES-GMDPRKVFG  139 (140)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHH-TCCTTTEEE
T ss_pred             EEEEecccccCCCcchhhhhccccchHHHHHHHHHhcC-CCcEEEEeCCcHHHHHHHHHHHH-CcCccceeC
Confidence            99999999999999999999999999999999999998 99999999999999999999999 999999765

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=1e-33  Score=231.19  Aligned_cols=147  Identities=18%  Similarity=0.288  Sum_probs=130.4

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      ||.|||+||++.+++....+..  +++ |+|+||+++||+||.++++|.|           +.+++.+++++++++|++.
T Consensus         1 Gt~LDsaR~r~~l~~~~~~~v~--~a~-ViGeHGds~vp~~S~~~i~g~~-----------~~~~i~~~v~~~g~eIi~~   66 (152)
T d1ojua2           1 GNQLDSQRLKERLYNAGARNIR--RAW-IIGEHGDSMFVAKSLADFDGEV-----------DWEAVENDVRFVAAEVIKR   66 (152)
T ss_dssp             SHHHHHHHHHHHHHHTTCBSCC--CCC-EEBCSSTTCEECGGGCCCBSCC-----------CHHHHHHHHHTTHHHHHHH
T ss_pred             CCccHHHHHHHHHHccCCCCcc--eeE-EEecCCCccccccccccccCcc-----------chhHhHHHHHHHHHHhhhh
Confidence            6899999999999876654432  677 8999999999999999998753           2367889999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||+++|+++++  +..++++|++|+ .++|+|++++|+||+ +|+|+|+||++ ++|+ ++++ ++|+++|+++|++|++
T Consensus        67 kG~t~~gia~a--~~~iv~aIl~d~~~v~pvs~~l~geyG~-~dv~lsvP~vig~~Gv-ei~~-l~L~~~E~~~l~~Sa~  141 (152)
T d1ojua2          67 KGATIFGPAVA--IYRMVKAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGA-EVAD-IKLSDEEIEKLRNSAK  141 (152)
T ss_dssp             HSSCCHHHHHH--HHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEE-EECC-CCCCHHHHHHHHHHHH
T ss_pred             ccceeccHHHH--HHHHHHHHHhcCCCceeeeEEeccccCC-CCEEEEeEEEECCCce-EEEc-CCCCHHHHHHHHHHHH
Confidence            99999987763  458999999998 999999999999999 79999999999 9998 4888 9999999999999999


Q ss_pred             HHHHHHHH
Q psy9582         316 ELKNEILS  323 (329)
Q Consensus       316 ~i~~~~~~  323 (329)
                      .||+.++.
T Consensus       142 ~ik~~i~~  149 (152)
T d1ojua2         142 ILRERLEE  149 (152)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            99999874

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=100.00  E-value=3.7e-33  Score=232.62  Aligned_cols=161  Identities=14%  Similarity=0.161  Sum_probs=142.6

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      ||.||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++.++ .|..+++.+.+++++++++..
T Consensus         1 GT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~v~g~~~~~~~~~~-~~~~~~i~~~v~~~~~~i~~~   78 (163)
T d1hyha2           1 GTLLDTARMQRAVGEAFDLDPRSVSGY-NLGEHGNSQFVAWSTVRVMGQPIVTLADAG-DIDLAAIEEEARKGGFTVLNG   78 (163)
T ss_dssp             TTHHHHHHHHHHHHHHHTCCGGGCBCC-EEBCTTTTCEECTTTCEETTEEGGGC------CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHhCcCHHHeEEE-EEcCCCCcCccceeccccCCchHHHHhccc-cchHHHHHHHHhhhHHHHHHH
Confidence            689999999999999999999999988 899999999999999999999999988765 677889999999999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      ||.+.|+.+.+  +..+..++..++ .+++++.+.++     +++|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus        79 kg~~~~~~a~~--~~~~~~~~~~~~~~~~~~s~~~~~-----~~~~~s~Pv~ig~~Gv~~v~~-l~Ls~~E~~~l~~s~~  150 (163)
T d1hyha2          79 KGYTSYGVATS--AIRIAKAVMADAHAELVVSNRRDD-----MGMYLSYPAIIGRDGVLAETT-LDLTTDEQEKLLQSRD  150 (163)
T ss_dssp             HSSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEECTT-----TCSEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             HHhHHHhHHHH--hhHHHHHhcCCccceeeeceecCC-----cceEEEeEEEEcCCeEEEEec-CCCCHHHHHHHHHHHH
Confidence            99988866653  458899999998 88888876442     57899999999 999999998 9999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy9582         316 ELKNEILSISHLI  328 (329)
Q Consensus       316 ~i~~~~~~~~~~~  328 (329)
                      +|++.++.+.+.|
T Consensus       151 ~l~~~~~~~~~~l  163 (163)
T d1hyha2         151 YIQQRFDEIVDTL  163 (163)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhC
Confidence            9999999998865

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=2.5e-33  Score=227.57  Aligned_cols=140  Identities=21%  Similarity=0.340  Sum_probs=128.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~~   83 (329)
                      |||+|||| |++|+++|+.|+..++++     ||+|+|++    +++++|.++|++|....+  ...+..+++ ++++++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~-----elvL~Di~----~~~~~g~alDl~~~~~~~~~~~~i~~~~d-~~~~~~   69 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVD-----EIALVDIA----EDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCS-----EEEEECSS----HHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCc-----eEEEEecc----cchhhHHHHHHhhhccccCCCCccccCCC-HHHhcc
Confidence            69999998 999999999999999988     99999999    888999999999976322  234555555 799999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      ||+||+++|.|+++|++|.+++.+|+++++++++++.++| |+++++++|||+|++|+++++++ ++|++|++|+
T Consensus        70 adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-p~aivivvtNPvD~~t~~~~k~s-g~p~~rViG~  142 (142)
T d1ojua1          70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYIMWKES-GKPRNEVFGM  142 (142)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHHHHHHHHHS-CCCTTSEEEC
T ss_pred             ccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhC-CCcEEEEecCChHHHHHHHHHHH-CCChhcEecC
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 9999998874

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=100.00  E-value=3.4e-33  Score=234.62  Aligned_cols=164  Identities=23%  Similarity=0.293  Sum_probs=146.9

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc---hhhhHHHHHhhhhHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW---NKNVFLPAISRRGEEII  235 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~---~~~~l~~~v~~~~~~i~  235 (329)
                      |.||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++.+. .+   ..+++.+.++.++++++
T Consensus         1 T~LD~~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~t~vp~~s~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~   78 (171)
T d1ez4a2           1 TSLDSSRLRVALGKQFNVDPRSVDAY-IMGEHGDSEFAAYSTATIGTRPVRDVAKEQ-GVSDDDLAKLEDGVRNKAYDII   78 (171)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECC-EESSSSSSCEECGGGCEETTEEHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEE-EEccCCCcccccccccccCCccceeecccc-cccchhhhhheeehhhhhHHHH
Confidence            68999999999999999999999977 899999999999999999999999887654 23   34556777888899999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      +.+|.+.++.++  ++..+++++.+++ .+++++++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus        79 ~~k~s~~~a~a~--~~~~~~~~i~~~~~~~~~~~~~~~~~~g~-~~~~~S~Pv~lg~~Gv~~v~~-l~Ls~~E~~~l~~s  154 (171)
T d1ez4a2          79 NLKGATFYGIGT--ALMRISKAILRDENAVLPVGAYMDGQYGL-NDIYIGTPAIIGGTGLKQIIE-SPLSADELKKMQDS  154 (171)
T ss_dssp             HHHSCCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHH
T ss_pred             HhhhhHhHHHHH--HHHHHHHHHhccCCceEEEEEeeccccCc-cceeeeEEEEEcCCcEEEEeC-CCCCHHHHHHHHHH
Confidence            999988876655  3558999999998 999999999999999 79999999999 999999998 99999999999999


Q ss_pred             HHHHHHHHHHHHhhh
Q psy9582         314 IEELKNEILSISHLI  328 (329)
Q Consensus       314 ~~~i~~~~~~~~~~~  328 (329)
                      +++|++.++.+...|
T Consensus       155 ~~~l~~~i~~~l~~l  169 (171)
T d1ez4a2         155 AATLKKVLNDGLAEL  169 (171)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999998777654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=100.00  E-value=2.5e-33  Score=227.71  Aligned_cols=140  Identities=24%  Similarity=0.329  Sum_probs=120.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||+|||| |++|+++++.|+..++++     ||+|+|++    ++++++.++||+|.. ++.....++++.+++++|||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~-----el~L~D~~----~~~~~g~a~Dl~~~~-~~~~~~~~~~~~~~~~~~ad   70 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTAN-----ELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGDYSDVKDCD   70 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSS-----EEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--CGGGGTTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEecc----CCccceeeeeeccCc-ccCCCeeEeeCcHHHhCCCc
Confidence            59999998 999999999999999987     99999999    778899999999975 45556667777899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      +||+++|.+++++++|.+++.+|++++++++++|.+++ |+++++++|||+|+||+++++.+ ++|++|++|.
T Consensus        71 ivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~ivvtNPvdv~t~~~~k~s-g~p~~rViG~  141 (142)
T d1y6ja1          71 VIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVSNPVDIITYMIQKWS-GLPVGKVIGS  141 (142)
T ss_dssp             EEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECSSSHHHHHHHHHHHH-TCCTTTEEEC
T ss_pred             eEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccC-CCceEEEecChHHHHHHHHHHHH-CCCccceecC
Confidence            99999999999999999999999999999999999997 99999999999999999999999 8999997664

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.5e-33  Score=232.10  Aligned_cols=164  Identities=25%  Similarity=0.275  Sum_probs=146.0

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc---cchhhhHHHHHhhhhHHH
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS---FWNKNVFLPAISRRGEEI  234 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~---~~~~~~l~~~v~~~~~~i  234 (329)
                      ||+||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++....   ....+++.+.++++++++
T Consensus         1 GT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~t~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (172)
T d1a5za2           1 GTVLDTARLRTLIAQHCGFSPRSVHVY-VIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEI   79 (172)
T ss_dssp             TTHHHHHHHHHHHHHHHTCCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHCcCHHHeEEE-EEecCCCCcccchhhcccCCcchhhhhhccccccHHHhhhhHHHHhccceeE
Confidence            689999999999999999999999977 8999999999999999999999998875431   224567888899999999


Q ss_pred             HHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582         235 ISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL  312 (329)
Q Consensus       235 ~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~  312 (329)
                      +..+|.+.++.+++  +..++.++..+. .+++++++.+|+|+. +|+|||+||++ ++|++++++ ++|+++|+++|++
T Consensus        80 ~~~~~~~~~~~a~a--~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~v~~s~P~~lg~~Gv~~v~~-l~Ls~~E~~~l~~  155 (172)
T d1a5za2          80 IERKGATHYAIALA--VADIVESIFFDEKRVLTLSVYLEDYLGV-KDLCISVPVTLGKHGVERILE-LNLNEEELEAFRK  155 (172)
T ss_dssp             HHHHSCCCHHHHHH--HHHHHHHHHTTCCEEEEEEEEESSBTTB-CSEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHH
T ss_pred             eeccccchhhHHHH--HHHHHHHHHhhcccceeeeccccccccc-CCeeEeeeEEEcCCceEEEeC-CCCCHHHHHHHHH
Confidence            99999888866653  447888888887 999999999999998 69999999999 999999998 9999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q psy9582         313 SIEELKNEILSISH  326 (329)
Q Consensus       313 s~~~i~~~~~~~~~  326 (329)
                      |++.||+.++.+..
T Consensus       156 sa~~lk~~i~~l~~  169 (172)
T d1a5za2         156 SASILKNAINEITA  169 (172)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999988754

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

Probab=100.00  E-value=5.7e-33  Score=232.80  Aligned_cols=163  Identities=13%  Similarity=0.167  Sum_probs=141.4

Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc-cchhhhHHHHHhhhhHHHH
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS-FWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~-~~~~~~l~~~v~~~~~~i~  235 (329)
                      +||.||++||++++|++++++|++|+++ |||+||++++|+||++++++.|+.++..... .....++.+..++++.++.
T Consensus         1 sGT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~v~~~s~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (169)
T d1ldma2           1 SGCNLDSARFRYLMGERLGVHSCSCHGW-VIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQDWKKLHKDVVDSAYEVI   79 (169)
T ss_dssp             CTTHHHHHHHHHHHHHHHTSCGGGCBCC-BCBCSSTTCCBCGGGCEETTEESHHHHSSTTTTTTTTHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCccchhhhhhcccCCcchHHhhcccchhhhcceeEEEecCceEEEe
Confidence            4799999999999999999999999988 8999999999999999999999998764431 1233456666777788888


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      ..+|.+.++.++  ++..+++++..++ .++|++++++|+||+++|+|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus        80 ~~~~s~~~a~a~--~~~~~~~~~~~~~~~~~~~~~~~~g~ygi~~~i~~s~Pv~lg~~Gv~~v~~-l~L~~~E~~~l~~s  156 (169)
T d1ldma2          80 KLKGYTSWAIGL--SVADLAETIMKNLCRVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIVK-MKLKPNEEQQLQKS  156 (169)
T ss_dssp             HHHSSCCHHHHH--HHHHHHHHHHTTCCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHH
T ss_pred             ccccchhhHHHH--HHhhhhheecCCCCceeeeeeecccccCCcCCceEEeeEEEcCCcEEEEec-CCCCHHHHHHHHHH
Confidence            888877765554  3458999999998 999999999999999999999999999 999999998 99999999999999


Q ss_pred             HHHHHHHHHH
Q psy9582         314 IEELKNEILS  323 (329)
Q Consensus       314 ~~~i~~~~~~  323 (329)
                      +++|++.++.
T Consensus       157 ~~~l~~~~k~  166 (169)
T d1ldma2         157 ATTLWDIQKD  166 (169)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999876553

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.4e-33  Score=229.79  Aligned_cols=154  Identities=60%  Similarity=1.016  Sum_probs=139.2

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++++||+||||+|++|+++++.|+++++++.++++.+.|+|.+  ...+++++..+|+.+...+....+..+.+.++++
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF   78 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccc--cchhhHcCchhhhhccccccccccccCCchhhhc
Confidence            88899999999889999999999999999987666667777776  3467788889999988766667888889999999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      +|||+||+++|.+++||++|.+++..|+++++++++.+.++|+|+++++++|||+|++|++++|++++||++||++
T Consensus        79 ~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsNPvDv~t~~a~k~asg~p~~rvia  154 (154)
T d1y7ta1          79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTA  154 (154)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEE
T ss_pred             ccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCcHHHHHHHHHHHcCCCcHHhccC
Confidence            9999999999999999999999999999999999999999986689999999999999999999866999999864

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=100.00  E-value=2.6e-33  Score=228.38  Aligned_cols=141  Identities=18%  Similarity=0.241  Sum_probs=121.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||| |+||+++|+.|+..++.+     ||+|+|++    +++++++++|++|.......+..+.++.+++++||
T Consensus         1 ~kKI~IIGa-G~VG~~~a~~l~~~~~~~-----elvL~Di~----~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~a   70 (146)
T d1hyha1           1 ARKIGIIGL-GNVGAAVAHGLIAQGVAD-----DYVFIDAN----EAKVKADQIDFQDAMANLEAHGNIVINDWAALADA   70 (146)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCc-----eEEEEecc----cchhhhHHHhhhccccccCCccceeccCHHHhccc
Confidence            369999998 999999999999999987     99999999    78899999999997643333444555668999999


Q ss_pred             cEEEEeCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          85 NIAILIGSFPR----KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        85 DiVi~~~g~~~----~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      |+||+++|.++    ++|++|.+++..|+++++++++.++++| |++++|++|||+|+||+++++++ |||++||+|
T Consensus        71 diVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aivivvtNPvD~~t~~~~k~s-g~p~~rViG  145 (146)
T d1hyha1          71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDVITALFQHVT-GFPAHKVIG  145 (146)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEE
T ss_pred             cEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCcHHHHHHHHHHHh-CCCccceeC
Confidence            99999999876    6789999999999999999999999997 99999999999999999999999 999999765

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.4e-32  Score=229.53  Aligned_cols=158  Identities=24%  Similarity=0.308  Sum_probs=141.6

Q ss_pred             hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc---hhhhHHHHHhhhhHHHHH
Q psy9582         160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW---NKNVFLPAISRRGEEIIS  236 (329)
Q Consensus       160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~---~~~~l~~~v~~~~~~i~~  236 (329)
                      +||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.++.... .+   ..+++.+.++++++++++
T Consensus         2 ~LD~~R~~~~la~~lgv~~~~V~~~-ViG~Hg~~~vp~~s~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~   79 (165)
T d1t2da2           2 VLDTSRLKYYISQKLNVCPRDVNAH-IVGAHGNKMVLLKRYITVGGIPLQEFINNK-LISDAELEAIFDRTVNTALEIVN   79 (165)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEETTEEHHHHHHTT-SSCHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCCcccceeecccCCcchhhhcccc-hhhhhhhhhhhhhhhhhhHHHhh
Confidence            6899999999999999999999988 899999999999999999999999887554 22   345677788889999999


Q ss_pred             hcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHH
Q psy9582         237 IRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSI  314 (329)
Q Consensus       237 ~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~  314 (329)
                      .+|.++|+.++  ++..+.+++..+. .++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+
T Consensus        80 ~~~~~~~a~a~--a~~~~~~~i~~~~~~~~~~~v~~~g~yg~-~~v~~s~Pv~lg~~Gv~~i~~-l~L~~~E~~~L~~s~  155 (165)
T d1t2da2          80 LHASPYVAPAA--AIIEMAESYLKDLKKVLICSTLLEGQYGH-SDIFGGTPVVLGANGVEQVIE-LQLNSEEKAKFDEAI  155 (165)
T ss_dssp             HTSSCCHHHHH--HHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHH
T ss_pred             hccceeechhH--HHHHHHHHHhhccccceeeeecccccccc-CCeeEeeeEEEcCCceEEEeC-CCCCHHHHHHHHHHH
Confidence            99988886655  3458999999998 999999999999998 79999999999 999999999 999999999999999


Q ss_pred             HHHHHHHHH
Q psy9582         315 EELKNEILS  323 (329)
Q Consensus       315 ~~i~~~~~~  323 (329)
                      ++|++..+.
T Consensus       156 ~~lk~~~~~  164 (165)
T d1t2da2         156 AETKRMKAL  164 (165)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999988654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4e-33  Score=230.05  Aligned_cols=154  Identities=49%  Similarity=0.842  Sum_probs=137.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ++++||+||||+|++|+++++.|+++++++.+++++++|+|++  +.++++++..+|+.+...+....+.++.+.+++++
T Consensus         1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (154)
T d5mdha1           1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT--PMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFK   78 (154)
T ss_dssp             CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTT
T ss_pred             CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc--cchhhhhhhhhhhcccccccccccccCcccccccC
Confidence            4689999999889999999999999999987777899999998  34566677777787776555567888888999999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      |+|+||+++|.|+++|++|.+++.+|+++++++++.|.++|++++++|++|||+|+||++++++++++|++||.|+
T Consensus        79 ~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~mt~v~~k~s~g~P~~~v~~m  154 (154)
T d5mdha1          79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCL  154 (154)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEEC
T ss_pred             CceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHHHHHHHHHHcCCCCHHHEeCC
Confidence            9999999999999999999999999999999999999999855677899999999999999999989999999774

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=227.25  Aligned_cols=141  Identities=21%  Similarity=0.331  Sum_probs=128.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..||+|||+ |+||+++|+.|+..++++     ||+|+|++    +++++|+++|++|.............+.++++++|
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~-----ElvLiD~~----~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~a   89 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLAD-----ELALVDVL----EDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANS   89 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSC----HHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCc-----EEEEEEec----cchhHHHHHHHhccccccCCCeEEeccchhhcccc
Confidence            479999998 999999999999999998     99999999    78899999999997533333344556679999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      |+||+++|.++++|++|.+++..|++++++++++|.+++ |++++|++|||+|+||+++++.+ |||++||+|
T Consensus        90 diVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~-p~aiiivvtNPvDv~t~~~~k~s-glp~~rViG  160 (160)
T d1i0za1          90 KIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCIIIVVSNPVDILTYVTWKLS-GLPKHRVIG  160 (160)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHH-CCCGGGEEE
T ss_pred             cEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchHHHHHHHHHHH-CcCcccccC
Confidence            999999999999999999999999999999999999997 99999999999999999999999 999999875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=100.00  E-value=4.9e-33  Score=226.90  Aligned_cols=144  Identities=20%  Similarity=0.294  Sum_probs=119.6

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |.+.+||+|||+ |++|+++|+.|++.++.+     ||+|+|++    +++++|+++|++|........... ...++++
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~-----elvL~D~~----~~~~~g~a~Dl~~a~~~~~~~~~~-~~d~~~~   70 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAE-----EFVIVDVV----KDRTKGDALDLEDAQAFTAPKKIY-SGEYSDC   70 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS----HHHHHHHHHHHHGGGGGSCCCEEE-ECCGGGG
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCc-----EEEEeecc----cchhHHHHHHHhccccccCCceEe-eccHHHh
Confidence            666789999998 999999999999999987     99999999    788999999999976433233333 4458899


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      ++||+||+++|.|+++|++|.+++.+|+++++++++.|.+++ |++++|++|||+|++++++++.+ ++|++||+|.
T Consensus        71 ~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvtNPvdv~t~~~~k~s-g~p~~rViG~  145 (146)
T d1ez4a1          71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAANPVDILTYATWKFS-GFPKERVIGS  145 (146)
T ss_dssp             TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHHH-CCCGGGEEEC
T ss_pred             ccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeCCccHHHHHHHHHHH-CcCccceecC
Confidence            999999999999999999999999999999999999999997 99999999999999999999999 9999997663

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-32  Score=230.65  Aligned_cols=162  Identities=16%  Similarity=0.169  Sum_probs=142.2

Q ss_pred             EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc----cchhhhHHHHHhhhhH
Q psy9582         157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS----FWNKNVFLPAISRRGE  232 (329)
Q Consensus       157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~----~~~~~~l~~~v~~~~~  232 (329)
                      +||.||++|+++++|+++|++|++|+.+ |||+||++++|+||+++++|.|+.++..+..    ....+++....+.++.
T Consensus         1 tGT~LD~~R~~~~vA~~l~v~~~~V~~~-ViG~Hs~~~ip~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   79 (172)
T d2ldxa2           1 SGCNLDSARFRYLIGEKLGVNPTSCHGW-VLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGY   79 (172)
T ss_dssp             CTTHHHHHHHHHHHHHHHTCCTTSSCCC-EEECSSSCEEECGGGCBSSCSSSSBSTTTCSCSSSSSSCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHhCcCHHHcEEE-EEcCCCCccccceecceecCcchhhHHHHhhhhhhhhhhhhhhhhhcccee
Confidence            4799999999999999999999999977 8999999999999999999999987765431    1244567777888889


Q ss_pred             HHHHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582         233 EIISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI  310 (329)
Q Consensus       233 ~i~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l  310 (329)
                      ++...++.+.++++++  +..++.++..++ .++++++.++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|
T Consensus        80 ~~~~~k~~s~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~g~ygi~~~i~~s~Pv~ig~~Gv~~v~~-l~L~~~E~~~l  156 (172)
T d2ldxa2          80 EVLDMKGYTSWAIGLS--VTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVK-VNMTAEEEGLL  156 (172)
T ss_dssp             HHHHHHSSCCHHHHHH--HHHHHHHHHTTCCEEEEEEEECTTSTTCCSSCEEEEEEEEETTEEEEEEC-CCCCHHHHHHH
T ss_pred             ehhhcccchhHHHHHH--HhHHHHhhcCCCccceeeeeecccccCCcCCeEEEEEEEEcCCCEEEEec-CCCCHHHHHHH
Confidence            9999998877766553  447888888887 999999999999999999999999999 999999998 99999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         311 NLSIEELKNEIL  322 (329)
Q Consensus       311 ~~s~~~i~~~~~  322 (329)
                      ++|++.||+.++
T Consensus       157 ~~s~~~lk~~~k  168 (172)
T d2ldxa2         157 KKSADTLWNMQK  168 (172)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHH
Confidence            999999987653

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=100.00  E-value=1.5e-32  Score=223.61  Aligned_cols=140  Identities=25%  Similarity=0.392  Sum_probs=126.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~   83 (329)
                      |||+|||| |++|+++++.|+..++.+     ||+|+|++    ++++++.++|+.|......  ..+..+ +.+++++|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~-----el~L~Di~----~~~~~~~~~d~~~~~~~~~~~~~i~~~-~~~~~~~d   69 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLAR-----ELVLLDVV----EGIPQGKALDMYESGPVGLFDTKVTGS-NDYADTAN   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS----SSHHHHHHHHHHTTHHHHTCCCEEEEE-SCGGGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCc-----eEEEeccc----cccchhhhhhhhcccchhcccceEEec-CCHHHhcC
Confidence            69999998 999999999999999987     99999999    7788999999988653222  334433 55899999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM  158 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  158 (329)
                      ||+||+++|.|+++|++|.+++.+|+++++++++.+.++| |++|++++|||+|++++++++.+ ++|++|++|+
T Consensus        70 advvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~-p~aivivvtNPvd~~~~~~~~~s-g~p~~rviG~  142 (142)
T d1guza1          70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLDIMTHVAWVRS-GLPKERVIGM  142 (142)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHHHHHHHHHHHH-CSCGGGEEEE
T ss_pred             CeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC-CCeEEEEecCChHHHHHHHHHHh-CCChHhEeeC
Confidence            9999999999999999999999999999999999999998 99999999999999999999999 9999998874

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.98  E-value=4.9e-32  Score=220.41  Aligned_cols=142  Identities=20%  Similarity=0.384  Sum_probs=124.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEee-cCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVH-ENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~-~~~~~al~   82 (329)
                      |||+||||+|++|+++|+.|+..++++     ||+|+|++  ++.++++|.++|+.|......  .++++. ++.+++++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~-----el~L~D~~--~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~   73 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMK-----DLVLIGRE--HSINKLEGLREDIYDALAGTRSDANIYVESDENLRIID   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCC-----EEEEEECG--GGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCccc-----ccccccch--hhhHhhhcccccchhcccccccCCccccCCcchHHHhc
Confidence            689999987999999999999999988     99999998  224567899999999753332  344433 45689999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      |||+||+++|.|+++|++|.+++..|+++++++++.+.++| |++++ ++|||+|+|++++++.+ +||++||+|
T Consensus        74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~ii-vVtNPvD~mt~~~~k~s-g~p~~rViG  145 (145)
T d1hyea1          74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF-VITNPVDVMTYKALVDS-KFERNQVFG  145 (145)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-ECSSSHHHHHHHHHHHH-CCCTTSEEE
T ss_pred             cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEE-EEcCchHHHHHHHHHHH-CcCcccccC
Confidence            99999999999999999999999999999999999999997 88765 68999999999999999 999999865

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.98  E-value=1.8e-32  Score=225.69  Aligned_cols=145  Identities=18%  Similarity=0.295  Sum_probs=130.9

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCcc
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENPI   78 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~~   78 (329)
                      ||++++||+|||| |++|+++|+.|+..++.      ||+|+|++    ++++++.++|+.|....  ....+..+++.+
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~------el~L~D~~----~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~   71 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELA------DVVLYDVV----KGMPEGKALDLSHVTSVVDTNVSVRAEYSYE   71 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCC------EEEEECSS----SSHHHHHHHHHHHHHHHTTCCCCEEEECSHH
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCc------eEEEEEec----cccchhHHHHHhhhccccCCeeEEeccCchh
Confidence            7899999999998 99999999999988863      89999999    78899999999996532  234566667777


Q ss_pred             cccCCccEEEEeCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCC
Q psy9582          79 TAFKDANIAILIGSFPRKSNM-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYK  153 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~  153 (329)
                      ++++|||+||+++|.++++|+     +|.+++..|+++++++++.+.++| |+++++++|||+|++|+++++.+ |||++
T Consensus        72 ~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aiviivsNPvd~lt~~~~~~s-g~p~~  149 (154)
T d1pzga1          72 AALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCMVKVMCEAS-GVPTN  149 (154)
T ss_dssp             HHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHH-CCCGG
T ss_pred             hhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeCCcHHHHHHHHHHHh-CcChh
Confidence            899999999999999999985     899999999999999999999997 99999999999999999999999 99999


Q ss_pred             cEEEe
Q psy9582         154 NFTAM  158 (329)
Q Consensus       154 ~i~~~  158 (329)
                      |++|+
T Consensus       150 rViG~  154 (154)
T d1pzga1         150 MICGM  154 (154)
T ss_dssp             GEEEC
T ss_pred             cEecC
Confidence            98874

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=5.7e-32  Score=226.38  Aligned_cols=161  Identities=19%  Similarity=0.291  Sum_probs=141.3

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc---cchhhhHHHHHhhhhHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS---FWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~---~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.||++||++++|++||++|++|+.+ |||+||++++|+||+++++|.|+.+++....   .+..+++.+.++..+.++.
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~   79 (168)
T d1ldna2           1 TILDTARFRFLLGEYFSVAPQNVHAY-IIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQII   79 (168)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHeEEE-EEcCCCCccccchhhcccCCcchhhhhhhhhhhhccchhhhhhhhhhhHHHHH
Confidence            68999999999999999999999977 8999999999999999999999998775431   1234567777788889999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      ..+|.+.++.++.  +..+..++..+. .+++++++++|+||. +|+|||+||++ ++|+.++++ ++|+++|+++|++|
T Consensus        80 ~~~~~s~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~yg~-~~v~~s~Pv~lg~~Gv~~v~~-l~Ls~~E~~~L~~s  155 (168)
T d1ldna2          80 EKKGATYYGIAMG--LARVTRAILHNENAILTVSAYLDGLYGE-RDVYIGVPAVINRNGIREVIE-IELNDDEKNRFHHS  155 (168)
T ss_dssp             HHHSCCCHHHHHH--HHHHHHHHHTTCCEEEEEEEEEESTTSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHH
T ss_pred             HhhccccchHHHH--HhhHHHhhhcccceeeeeeeeeccccCC-CCeeecceEEEcCCeEEEEeC-CCCCHHHHHHHHHH
Confidence            9998877766553  347888888887 999999999999996 79999999999 999999998 99999999999999


Q ss_pred             HHHHHHHHHHH
Q psy9582         314 IEELKNEILSI  324 (329)
Q Consensus       314 ~~~i~~~~~~~  324 (329)
                      ++.||+.++++
T Consensus       156 ~~~lk~~i~~a  166 (168)
T d1ldna2         156 AATLKSVLARA  166 (168)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHHH
Confidence            99999999874

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=3.4e-32  Score=224.31  Aligned_cols=141  Identities=21%  Similarity=0.298  Sum_probs=128.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..||+|||| |+||+++|+.|+..++++     ||+|+|++    +++++|+++||+|...........+.+.++++++|
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~-----elvL~D~~----~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~a   88 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLAD-----ELALVDAD----TDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANS   88 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCS-----EEEEECSC----HHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----chhhhccHHHHhCcchhcCCCeEEeccchhhhccc
Confidence            369999998 999999999999999987     99999999    78899999999997633333344455668999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      |+||+++|.++++|++|.+++..|+++++++++.|.+++ |+++++++|||+|+||+++++++ |||++||+|
T Consensus        89 divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~-p~~ivivvtNPvDv~t~~~~k~s-g~p~~rV~G  159 (159)
T d2ldxa1          89 KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS-PDCKIIVVTNPVDILTYVVWKIS-GFPVGRVIG  159 (159)
T ss_dssp             EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHS-TTCEEEECSSSHHHHHHHHHHHH-CSCTTTEEE
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCcHHHHHHHHHHHH-CcCcccccC
Confidence            999999999999999999999999999999999999997 99999999999999999999999 999999875

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.1e-31  Score=215.65  Aligned_cols=141  Identities=20%  Similarity=0.306  Sum_probs=121.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      |||+||||+|+||+++|+.|+. .++.+     ||+|+|++    + .++|.++|++|....+.......++.+++++||
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~-----el~L~D~~----~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~a   70 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGS-----ELSLYDIA----P-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGA   70 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTC-----EEEEECSS----T-THHHHHHHHHTSCSSCEEEEECSSCCHHHHTTC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCc-----EEEEeccc----c-cchhHHHHHHCCccccCCcEEEcCCCccccCCC
Confidence            6999999779999999999875 46766     99999987    3 468999999997644433333445668999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHH---CCCCCCCcEEE
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKS---APDLSYKNFTA  157 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~---~~~~~~~~i~~  157 (329)
                      |+||+++|.|+++|++|.+++..|.+++++++++|.+++ |+++++++|||+|.|++++++.   .++||++|++|
T Consensus        71 DvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtNPvD~m~~~~~~v~~~~~~l~~~RviG  145 (145)
T d2cmda1          71 DVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG  145 (145)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHHHHHTTCCCGGGEEE
T ss_pred             CEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccCCchHHHHHHHHHHHHcCCCChhhccC
Confidence            999999999999999999999999999999999999997 9999999999999999998864   34799999765

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=99.97  E-value=3.1e-33  Score=235.10  Aligned_cols=162  Identities=21%  Similarity=0.350  Sum_probs=142.0

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc---cchhhhHHHHHhhhhHHHH
Q psy9582         159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS---FWNKNVFLPAISRRGEEII  235 (329)
Q Consensus       159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~---~~~~~~l~~~v~~~~~~i~  235 (329)
                      |.||++||++++|+++|++|++|+++ |||+||++++|+||+++++|.|+.+++...+   ....+++.+.+++++++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~   79 (172)
T d1llca2           1 TSLDTARFRQSIAEMVNVDARSVHAY-IMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEII   79 (172)
T ss_dssp             THHHHHHHHHHHHHHSCCCTTSCEEE-EEBSSSSSCEEEEEEEESTTCCSSSSSSCSCSSSSSSSSTTTTTTGGGTTTTS
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEE-EEcCCCCcceeeeeccccCCccHHHHHhhhhccchhHHHHHHHhhcchHHHHH
Confidence            68999999999999999999999977 8999999999999999999999998775431   1234567777888999999


Q ss_pred             HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582         236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS  313 (329)
Q Consensus       236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s  313 (329)
                      +.+|.++++.+++  +..+..++.+++ .++|++++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus        80 ~~kg~~~~a~a~~--~~~~~~~~~~~~~~~~~~~~~~~g~ygi-~~~~~s~P~~lg~~Gv~~i~~-l~L~~~E~~~l~~s  155 (172)
T d1llca2          80 KLKGATFYGIATA--LARISKAILNDENAVLPLSVYMDGQYGI-NDLYIGTPAVINRNGIQNILE-IPLTDHEEESMQKS  155 (172)
T ss_dssp             SSSSCTTHHHHHH--HHHHHHHHHHTCCCCEECCCCCSSSSSC-CSSCCBCEEEEETTEEEEECC-CCCTTHHHHHHHTT
T ss_pred             HhhhhhhhhhHHH--HHHHHHHHhcCCCCccceeeeecCccCc-ccceEEEEEEEcCCceEEEec-CCCCHHHHHHHHHH
Confidence            9999888766653  347888888887 999999999999999 58999999999 999999998 99999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy9582         314 IEELKNEILSIS  325 (329)
Q Consensus       314 ~~~i~~~~~~~~  325 (329)
                      +++||+.++.+.
T Consensus       156 ~~~lk~~i~~~~  167 (172)
T d1llca2         156 ASQLKKVLTDAF  167 (172)
T ss_dssp             TTTTTTTTTTTC
T ss_pred             HHHHHHHHHHHH
Confidence            999998876543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.97  E-value=2e-31  Score=216.57  Aligned_cols=138  Identities=20%  Similarity=0.339  Sum_probs=115.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~al~~   83 (329)
                      +||+|||+ |+||+++|+.|+.+++.      +++|+|++    ++++++.++|+.|...  +...++..+.+ ++++++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~------dl~l~D~~----~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d-~~~~~~   69 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELG------DIVLLDIV----EGVPQGKALDLYEASPIEGFDVRVTGTNN-YADTAN   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS------EEEEECSS----SSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcc------eEEEEeec----cccchhHHHHhhccccccCCCCEEEecCc-HHHhcC
Confidence            69999998 99999999999998874      89999999    7888999999998753  22234555554 789999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      ||+||+++|.|+++|++|.+++..|+++++++++.|.+++ |+++++++|||+|+||+++++.+ |||++|++|
T Consensus        70 advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~-p~aivivvtNPvDv~t~~~~~~s-glp~~rViG  141 (142)
T d1uxja1          70 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDAMTYLAAEVS-GFPKERVIG  141 (142)
T ss_dssp             CSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGC-TTCEEEECSSSHHHHHHHHHHHH-CCCGGGEEE
T ss_pred             CCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccC-CCceEEEeCCchHHHHHHHHHHH-CcCcccccC
Confidence            9999999999999999999999999999999999999997 99999999999999999999999 999999876

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=7.6e-31  Score=213.21  Aligned_cols=140  Identities=21%  Similarity=0.318  Sum_probs=121.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~a   84 (329)
                      .||+||||+|+||+++|+.|+.+++++     ||+|+|++    +  .+++++|++|...... ..+..+.+.+++++||
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~-----elvLiDi~----~--~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~a   69 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVS-----RLTLYDIA----H--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGC   69 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCS-----EEEEEESS----S--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccc-----eEEEEecc----c--cchhhHHHhhhhhhcCCCeEEcCCChHHHhCCC
Confidence            389999977999999999999999988     99999998    3  4678899998763222 2233345668899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH---HCCCCCCCcEEE
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK---SAPDLSYKNFTA  157 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~---~~~~~~~~~i~~  157 (329)
                      |+||+++|.|+++|++|.+++..|+++++++++.+.+++ |+++++++|||+|.+++++++   .+++||++|++|
T Consensus        70 DivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~-p~~iiivvtNPvD~~t~~~~~~~kk~~~~p~~rViG  144 (144)
T d1mlda1          70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFG  144 (144)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEE
T ss_pred             CEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCeEEEEecCchhhhHHHHHHHHHHhcCCCcccccC
Confidence            999999999999999999999999999999999999997 999999999999998888753   344899999865

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.97  E-value=1.3e-30  Score=216.38  Aligned_cols=157  Identities=20%  Similarity=0.344  Sum_probs=138.3

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI  237 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~  237 (329)
                      ||+||++||++++|+++|++|++|+++ |||+||++++|+||++++++.|....     ....+++.+.++.++.++.+.
T Consensus         2 Gt~LD~~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~v~~~s~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~   75 (161)
T d1o6za2           2 GGRLDSARFRYVLSEEFDAPVQNVEGT-ILGEHGDAQVPVFSKVSVDGTDPEFS-----GDEKEQLLGDLQESAMDVIER   75 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEETTBCCCCC-----HHHHHHHHHHHHHHHHHHHTT
T ss_pred             CchHHHHHHHHHHHHHHCcCHHHeEEE-EEeCCCCceeeehhhhcccccccccc-----hHHHHHHHHHhhhhHHHHHHh
Confidence            489999999999999999999999988 89999999999999999998775422     124567888899999999999


Q ss_pred             cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582         238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE  315 (329)
Q Consensus       238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~  315 (329)
                      +|.+.++.+++  +..+..+++.+. .+++++++++|+|+. +|+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus        76 ~~~s~~~~a~a--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~S~Pv~ig~~Gv~~v~~-l~l~~~E~~~L~~s~~  151 (161)
T d1o6za2          76 KGATEWGPARG--VAHMVEAILHDTGEVLPASVKLEGEFGH-EDTAFGVPVSLGSNGVEEIVE-WDLDDYEQDLMADAAE  151 (161)
T ss_dssp             TSSCCHHHHHH--HHHHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHh--hHhhhHhhhhccccceeecccccccccc-cCceeeeeeEEcCCCEEEEeC-CCCCHHHHHHHHHHHH
Confidence            98887766543  447888888887 899999999998887 79999999999 999999998 9999999999999999


Q ss_pred             HHHHHHHHH
Q psy9582         316 ELKNEILSI  324 (329)
Q Consensus       316 ~i~~~~~~~  324 (329)
                      +|++.++.+
T Consensus       152 ~L~~~~~~i  160 (161)
T d1o6za2         152 KLSDQYDKI  160 (161)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999999875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=6e-31  Score=215.13  Aligned_cols=140  Identities=21%  Similarity=0.350  Sum_probs=123.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c-cceEeecCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L-VDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~-~~i~~~~~~~~al~   82 (329)
                      +.||+|||+ |++|+++|+.|+++++ .     ||+|+|++    +++++++++|++|..... . ..+.. ++.+++++
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l-~-----el~L~Di~----~~~~~g~a~Dl~~~~~~~~~~~~v~~-~~~~~~~~   70 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNL-G-----DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSG-SNTYDDLA   70 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-C-----EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEE-ECCGGGGT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCC-C-----eEEEEecc----CCcceeeecchhhhccccCCCcEEEe-cccccccC
Confidence            479999998 9999999999988886 4     99999999    788999999999975321 1 23333 46689999


Q ss_pred             CccEEEEeCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582          83 DANIAILIGSFPRKSNME-----RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~-----~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      |||+||+++|.++++|++     |.+++..|++++++++++++++| |+++++++|||+|+||+++++.+ +||++|++|
T Consensus        71 ~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aivivvtNPvD~~t~~~~~~s-g~p~~rViG  148 (150)
T d1t2da1          71 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVMVQLLHQHS-GVPKNKIIG  148 (150)
T ss_dssp             TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHHH-CCCGGGEEE
T ss_pred             CCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEEecCchHHHHHHHHHHH-CCCchheec
Confidence            999999999999999875     99999999999999999999998 99999999999999999999999 999999776


Q ss_pred             e
Q psy9582         158 M  158 (329)
Q Consensus       158 ~  158 (329)
                      .
T Consensus       149 ~  149 (150)
T d1t2da1         149 L  149 (150)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.96  E-value=2.2e-29  Score=210.73  Aligned_cols=158  Identities=21%  Similarity=0.204  Sum_probs=123.6

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecC-CCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHH
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH-SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIIS  236 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h-g~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~  236 (329)
                      +|.|||+||++++|++|+++|++|+++ |+|+| |++++|+||++.+++.+..     +   ..+++.+.+++++++|++
T Consensus         1 ~T~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHg~~t~vp~~s~~~~~~~~~~-----~---~~~~l~~~v~~~~~eii~   71 (169)
T d1mlda2           1 VTTLDIVRANAFVAELKGLDPARVSVP-VIGGHAGKTIIPLISQCTPKVDFPQ-----D---QLSTLTGRIQEAGTEVVK   71 (169)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCGGGCBCC-EEECSSGGGEEECGGGCBSCCCCCH-----H---HHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeeEE-EEEcCCCcceeehhhhhccCCCCcH-----H---HHHHHHHHHHHhHHHHHH
Confidence            489999999999999999999999999 67777 6889999999887653222     1   357899999999999999


Q ss_pred             hcCCccHHHH--HHHHHHHHHHHHh----CCCcEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582         237 IRGASSAASA--ASAAIDHIKDWIF----GTENWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK  308 (329)
Q Consensus       237 ~kg~~~~~~~--a~~~~~~l~~~i~----~~~~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~  308 (329)
                      .||.+++..+  +++ +..++.++.    ++..+.+++.   +.|+.++|+|||+||++ ++|++++++ + +|+++|++
T Consensus        72 ~k~~~~~~~~~~~~a-~~~~~~~i~~~~~~~~~v~~~~~---~~~~~~~~v~~s~P~~ig~~Gi~~v~~-l~~L~~~E~~  146 (169)
T d1mlda2          72 AKAGAGSATLSMAYA-GARFVFSLVDAMNGKEGVVECSF---VKSQETDCPYFSTPLLLGKKGIEKNLG-IGKISPFEEK  146 (169)
T ss_dssp             HHTTSCSCCHHHHHH-HHHHHHHHHHHHHTCTTCEEEEE---EECCSSSSSEEEEEEEEETTEEEEECC-CCSCCHHHHH
T ss_pred             hhcCcChHhHHHHHH-HHHHHHHhccccCCceEEEEEee---ccccccCCEeEeeeEEEcCCccEEEec-CCCCCHHHHH
Confidence            8876554222  222 224444443    3334444332   34555578999999999 999999999 6 79999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhC
Q psy9582         309 KINLSIEELKNEILSISHLIR  329 (329)
Q Consensus       309 ~l~~s~~~i~~~~~~~~~~~~  329 (329)
                      +|++|+++||+.++.+++|+.
T Consensus       147 ~l~~s~~~lk~~I~~g~~fi~  167 (169)
T d1mlda2         147 MIAEAIPELKASIKKGEEFVK  167 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999874

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.7e-28  Score=202.86  Aligned_cols=158  Identities=13%  Similarity=0.106  Sum_probs=125.5

Q ss_pred             echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC-CceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHH
Q psy9582         158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIIS  236 (329)
Q Consensus       158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg-~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~  236 (329)
                      +|.|||+||++++|+++|++|++|+++ |+|+|| ++++|++|++...+.+         .+..+++.+.+++++.++++
T Consensus         1 ~T~LDs~R~~~~iA~~l~v~~~~V~~~-ViGghg~~~~~p~~s~~~~~~~~---------~~~~~~l~~~v~~~g~~ii~   70 (167)
T d2cmda2           1 VTTLDIIRSNTFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQVPGVSFT---------EQEVADLTKRIQNAGTEVVE   70 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGCCCC-EEECSSTTTEEECGGGCTTCCCC---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeEEE-EEEcCCCceEeeecccccCCCCc---------HHHHHHHHHHHHhhhhhhhh
Confidence            489999999999999999999999999 567675 6677877876543221         23567899999999999998


Q ss_pred             hcC-C--ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHHHH
Q psy9582         237 IRG-A--SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRKKI  310 (329)
Q Consensus       237 ~kg-~--~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~~l  310 (329)
                      .++ .  ++++.+ . ++..++.++..+. ...++++...++|+.++|+|||+||++ ++|++++++ + +|+++|+++|
T Consensus        71 ~~~~~~~~~~~~a-~-a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~s~P~~ig~~Gv~~v~~-l~~L~~~E~~~l  147 (167)
T d2cmda2          71 AKAGGGSATLSMG-Q-AAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKS-IGTLSAFEQNAL  147 (167)
T ss_dssp             HHTTSCSCCHHHH-H-HHHHHHHHHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECC-CCCCCHHHHHHH
T ss_pred             hhccCcchHHHHH-H-HHHHHHHHHhccCCCceEEEEEcccccccCCCccccccEEEeCCceEEEee-CCCCCHHHHHHH
Confidence            663 2  333333 2 3447777777653 445555555667777788999999999 999999998 6 6999999999


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q psy9582         311 NLSIEELKNEILSISHLI  328 (329)
Q Consensus       311 ~~s~~~i~~~~~~~~~~~  328 (329)
                      ++|+++||+.++.+++|+
T Consensus       148 ~~s~~~lk~~I~~~~~fi  165 (167)
T d2cmda2         148 EGMLDTLKKDIALGQEFV  165 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999999986

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=3.1e-26  Score=191.15  Aligned_cols=143  Identities=11%  Similarity=0.042  Sum_probs=113.8

Q ss_pred             CCEEEEEcCCCchHHH--HHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCcc
Q psy9582           5 PVRISITGAAGQIGYN--IIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPI   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~--la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~   78 (329)
                      ++||+|||| |++|.+  ++..+.....+.-   .||+|+|++    +++.++.++|+.+..    .....++..++|.+
T Consensus         1 k~KI~iIGa-Gs~~~~~~~~~l~~~~~~~~~---~eI~L~Di~----e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~   72 (169)
T d1s6ya1           1 RLKIATIGG-GSSYTPELVEGLIKRYHELPV---GELWLVDIP----EGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRR   72 (169)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCE---EEEEEECCG----GGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred             CcEEEEECC-ChhhHHHHHHHHHHhccccCC---CEEEEEcCC----ccHHHHHHHHHHHHHHHHhcCCCceeeecCCch
Confidence            479999999 988754  4445554433210   199999999    666677788886542    12335777889999


Q ss_pred             cccCCccEEEEeCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          79 TAFKDANIAILIGSFPRKSNMERSEL--------------------LAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~~~~--------------------~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++++|||+||++++.+++++++|.++                    +.+|++++++++++|+++| ||||+|++|||+|+
T Consensus        73 ~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~vtNPvdv  151 (169)
T d1s6ya1          73 RALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAGM  151 (169)
T ss_dssp             HHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHH
T ss_pred             hhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEEeCChHHH
Confidence            99999999999999988776665554                    5799999999999999998 99999999999999


Q ss_pred             HHHHHHHHCCCCCCCcEEEec
Q psy9582         139 NTYITMKSAPDLSYKNFTAML  159 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t  159 (329)
                      ||++++|++   |++|++|+|
T Consensus       152 ~t~~~~k~~---p~~kviGlC  169 (169)
T d1s6ya1         152 VTEAVLRYT---KQEKVVGLC  169 (169)
T ss_dssp             HHHHHHHHC---CCCCEEECC
T ss_pred             HHHHHHHHC---CCCCEEeeC
Confidence            999999987   567898876

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=2.5e-26  Score=190.70  Aligned_cols=142  Identities=15%  Similarity=0.104  Sum_probs=114.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHH-HHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcc
Q psy9582           3 KKPVRISITGAAGQIGYNIIF-RIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPI   78 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~-~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~   78 (329)
                      ++..||+|||| |++|.+.+. .++. ..-+.-   .||+|+|++    ++++++.+.++.+...  ....++..++|.+
T Consensus         1 ~k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~---~eivL~Did----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   72 (167)
T d1u8xx1           1 KKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPI---RKLKLYDND----KERQDRIAGACDVFIREKAPDIEFAATTDPE   72 (167)
T ss_dssp             CCCEEEEEECT-TSSSHHHHHHHHHHTTTTSCE---EEEEEECSC----HHHHHHHHHHHHHHHHHHCTTSEEEEESCHH
T ss_pred             CCCceEEEECC-ChhhhHHHHHHHHhhhhhcCC---CEEEEEcCC----hhHHHHHHHHHHHHHHHhCCCcceEecCChh
Confidence            46689999999 999887543 3332 221110   199999999    7888877777776432  2335788889999


Q ss_pred             cccCCccEEEEeCCCCCCCCCCHHHHHH--------------------HHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          79 TAFKDANIAILIGSFPRKSNMERSELLA--------------------INSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~--------------------~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++++|||+||+++|.++++|++|.+++.                    +|+++++++++.|+++| ||||+|++|||+|+
T Consensus        73 eal~~AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~-P~A~li~~TNPvdv  151 (167)
T d1u8xx1          73 EAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAAI  151 (167)
T ss_dssp             HHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHHH
T ss_pred             hccCCCCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhC-CCeEEEEeCCHHHH
Confidence            9999999999999999988888887754                    67999999999999998 99999999999999


Q ss_pred             HHHHHHHHCCCCCCCcEE
Q psy9582         139 NTYITMKSAPDLSYKNFT  156 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~  156 (329)
                      +|+++++++   |++||+
T Consensus       152 ~t~~~~k~~---P~~rVI  166 (167)
T d1u8xx1         152 VAEATRRLR---PNSKIL  166 (167)
T ss_dssp             HHHHHHHHS---TTCCEE
T ss_pred             HHHHHHHHC---Cccccc
Confidence            999999986   667764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=8.8e-26  Score=187.10  Aligned_cols=141  Identities=13%  Similarity=0.069  Sum_probs=108.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCC-ceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQP-IILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~-~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      |||+|||| |++|.+.+...+......  -+ .||+|+|++    +++++ .+.|+.+........+.++++.+++++||
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~--~~~~el~L~Did----~~k~~-~~~d~~~~~~~~~~~~~~t~~~~~~l~~a   72 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISED--VRIDEVIFYDID----EEKQK-IVVDFVKRLVKDRFKVLISDTFEGAVVDA   72 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTT--SCCCEEEEECSC----HHHHH-HHHHHHHHHHTTSSEEEECSSHHHHHTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccc--cCccEEEEEecC----cHHHH-HHHHHHHhhhccCceEEEecCcccccCCC
Confidence            69999999 999998876544322210  00 199999999    66665 46677665434445778889999999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELL--------------------AINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM  144 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~--------------------~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~  144 (329)
                      |+||+++|.+++++++|.+++                    .++++.+.++.+ +.++| |+||++++|||+|++|++++
T Consensus        73 DvVVita~~~~~~~~~r~~~i~~~~~i~~~~~~g~~g~~~~~r~~~~~~~i~~-~~~~~-p~a~~i~vtNPvdiit~~~~  150 (162)
T d1up7a1          73 KYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVD-TVRKT-SNATIVNFTNPSGHITEFVR  150 (162)
T ss_dssp             SEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHH-HHHHT-TCCEEEECSSSHHHHHHHHH
T ss_pred             CEEEEecccCCCCCcchHhhhhhhcCeeeeeccCcchhhhhhhhhHHHHHHhh-hhccC-CCeEEEEeCCHHHHHHHHHH
Confidence            999999999887766655543                    456677777766 66787 99999999999999999999


Q ss_pred             HHCCCCCCCcEEEec
Q psy9582         145 KSAPDLSYKNFTAML  159 (329)
Q Consensus       145 ~~~~~~~~~~i~~~t  159 (329)
                      +++   |++|++|+|
T Consensus       151 ~~~---p~~rviGlC  162 (162)
T d1up7a1         151 NYL---EYEKFIGLC  162 (162)
T ss_dssp             HTT---CCSSEEECC
T ss_pred             HhC---CCCCEEeeC
Confidence            986   457888876

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=4.8e-24  Score=177.99  Aligned_cols=140  Identities=13%  Similarity=0.198  Sum_probs=109.7

Q ss_pred             CCEEEEEcCCCchHHHHHH--HHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIF--RIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~--~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~a   80 (329)
                      ++||+|||| |++|++++.  .|+....+..   .||+|+|++    ++++++.+.|+++...  ....++..++|.+++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~---~eivL~Did----~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~ea   73 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSG---STVTLMDID----EERLDAILTIAKKYVEEVGADLKFEKTMNLDDV   73 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTT---CEEEEECSC----HHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCC---CEEEEEeCC----chHHHHHHHHHHHHHHhcCCCeEEEEeCChhhc
Confidence            589999998 999987543  3443322210   199999999    8889999999987542  223578888999999


Q ss_pred             cCCccEEEEeCCC------------------CCCCCCCHHHH--------HHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          81 FKDANIAILIGSF------------------PRKSNMERSEL--------LAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        81 l~~aDiVi~~~g~------------------~~~~g~~~~~~--------~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ++|||+|+++++.                  +++++++|.+.        +.+|+++++++++.|+++| |+||+|++||
T Consensus        74 L~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~-p~a~~i~~TN  152 (171)
T d1obba1          74 IIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQAAN  152 (171)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEEECSS
T ss_pred             ccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC-cCeEEEEECC
Confidence            9999999997654                  34445554443        5689999999999999998 9999999999


Q ss_pred             chhhHHHHHHHHCCCCCCCcEEE
Q psy9582         135 PVNTNTYITMKSAPDLSYKNFTA  157 (329)
Q Consensus       135 P~~~~~~~~~~~~~~~~~~~i~~  157 (329)
                      |+|++|+++++++ ++   |++|
T Consensus       153 Pvdv~t~~~~k~~-~~---k~iG  171 (171)
T d1obba1         153 PIFEGTTLVTRTV-PI---KAVG  171 (171)
T ss_dssp             CHHHHHHHHHHHS-CS---EEEE
T ss_pred             hHHHHHHHHHHhc-CC---CccC
Confidence            9999999999999 44   5543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.9e-11  Score=101.49  Aligned_cols=112  Identities=14%  Similarity=0.168  Sum_probs=82.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh----hc---cc------------C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE----DC---IF------------P   66 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~----~~---~~------------~   66 (329)
                      .||+|||| |.||+.+|..++..|+       +|+|+|++    ++.++.....+.    ..   ..            .
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~-------~V~l~D~~----~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~   72 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGH-------TVVLVDQT----EDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEK   72 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCC-------cEEEEECC----hHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHH
Confidence            49999999 9999999999999998       99999999    333321111111    00   00            0


Q ss_pred             CccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH
Q psy9582          67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK  145 (329)
Q Consensus        67 ~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~  145 (329)
                      .+.++..+++..+++++||+|+.+.              .+|.++.+++...++++++++++  +.||...+...-+..
T Consensus        73 ~l~~i~~~~d~~~a~~~ad~ViEav--------------~E~l~~K~~v~~~l~~~~~~~~i--lasnTS~l~i~~la~  135 (192)
T d1f0ya2          73 TLSTIATSTDAASVVHSTDLVVEAI--------------VENLKVKNELFKRLDKFAAEHTI--FASNTSSLQITSIAN  135 (192)
T ss_dssp             HHHTEEEESCHHHHTTSCSEEEECC--------------CSCHHHHHHHHHHHTTTSCTTCE--EEECCSSSCHHHHHT
T ss_pred             HHhhccccchhHhhhcccceehhhc--------------ccchhHHHHHHHHHhhhcccCce--eeccCcccccchhhh
Confidence            1246888889889999999999983              35678999999999999977875  588876554433433

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=98.97  E-value=3.3e-10  Score=94.41  Aligned_cols=114  Identities=11%  Similarity=0.123  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH----hhhhhc---c--c-----CCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI----MEIEDC---I--F-----PLLV   69 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~----~dl~~~---~--~-----~~~~   69 (329)
                      +-.||+|||| |.||+.+|..++..|+       +|+++|++    .+.++...    ..+.+.   .  .     ....
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~-------~V~l~D~~----~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~   70 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGT-------PILMKDIN----EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLN   70 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEECC----HHHHhhhhhhhhhhHHhhhcccccchhhhhhhhc
Confidence            3468999999 9999999999999998       89999999    33333211    111111   0  0     0124


Q ss_pred             ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHH
Q psy9582          70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKS  146 (329)
Q Consensus        70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~  146 (329)
                      ++..+++ .+++.+||+||.+.              .+|.++.+++.++|.++++|+++  ++||...+...-+...
T Consensus        71 ~i~~~~~-~~~~~~adlViEav--------------~E~l~~K~~lf~~l~~~~~~~~I--iaSnTS~l~i~~la~~  130 (186)
T d1wdka3          71 GIRPTLS-YGDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDAI--LASNTSTISISLLAKA  130 (186)
T ss_dssp             HEEEESS-STTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCE--EEECCSSSCHHHHGGG
T ss_pred             eeecccc-cccccccceeeeee--------------cchHHHHHHHHHHHHhhcCCCee--EEeccccccHHHHHHh
Confidence            5777665 57899999999973              35678999999999999988876  6888776544444443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.90  E-value=2.7e-09  Score=87.80  Aligned_cols=103  Identities=14%  Similarity=0.052  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC----ccceEeecCccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL----LVDVSVHENPIT   79 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~----~~~i~~~~~~~~   79 (329)
                      ++||+|||| |.+|+.+|..|.+.|+       +|.+||++    .++++.....-... ..+.    ......+++..+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e   68 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQ-------SVLAWDID----AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL   68 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHh
Confidence            479999999 9999999999999998       99999998    45444322111000 0011    123455677889


Q ss_pred             ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ++++||+||++.  |.              ...++++++++++.+++.+|+...|.
T Consensus        69 ~~~~aD~iii~v--~~--------------~~~~~~~~~i~~~l~~~~~iv~~~g~  108 (184)
T d1bg6a2          69 AVKDADVILIVV--PA--------------IHHASIAANIASYISEGQLIILNPGA  108 (184)
T ss_dssp             HHTTCSEEEECS--CG--------------GGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred             HhcCCCEEEEEE--ch--------------hHHHHHHHHhhhccCCCCEEEEeCCC
Confidence            999999999973  21              24567888888888788877655543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.85  E-value=1.5e-08  Score=85.13  Aligned_cols=119  Identities=19%  Similarity=0.139  Sum_probs=76.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----------CccceEeec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----------LLVDVSVHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----------~~~~i~~~~   75 (329)
                      |||+|||+ |++|.++|..|+..|.       +|..||.+    +++.+.+.........+          ...++..++
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~-------~V~g~D~n----~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~   68 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGH-------EVIGVDVS----STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTT   68 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCC-------cEEEEeCC----HHHHHHhcccCCcccchhhhhhhhhhhcccccccCC
Confidence            68999998 9999999999999987       99999999    55444321111000000          114677888


Q ss_pred             CcccccCCccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHH
Q psy9582          76 NPITAFKDANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNT  140 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~  140 (329)
                      +..+++++||+++++.++|.....+ ....+.   ...+.+.+.++.. .++..|++-| -|.....
T Consensus        69 ~~~~~i~~~d~i~i~VpTP~~~~~~~d~~~~~---~~~~~i~~~~~~~-~~~~liii~STv~pGtt~  131 (202)
T d1mv8a2          69 DFKKAVLDSDVSFICVGTPSKKNGDLDLGYIE---TVCREIGFAIREK-SERHTVVVRSTVLPGTVN  131 (202)
T ss_dssp             CHHHHHHTCSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHTTC-CSCCEEEECSCCCTTHHH
T ss_pred             CHHHHHhhCCEEEEecCccccccccccchhhh---hhhhhhhheeecc-cCCcceeeccccCCcchh
Confidence            8899999999999998888643321 111111   3444455555554 3666666654 4555443

>d1up7a2 d.162.1.2 (A:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.84  E-value=9.8e-08  Score=82.78  Aligned_cols=150  Identities=19%  Similarity=0.198  Sum_probs=103.0

Q ss_pred             HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhcc----C----c--cc----------------
Q psy9582         165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINN----N----S--FW----------------  218 (329)
Q Consensus       165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~----~----~--~~----------------  218 (329)
                      -+...+|+.+|++++++...+..-||    +.|+.+.+++|..+..-+.+    .    +  .|                
T Consensus         5 ~~~~~la~~lg~~~~~v~~~~~GlNH----~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl   80 (253)
T d1up7a2           5 NFIREIAEMFSARLEDVFLKYYGLNH----LSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYL   80 (253)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEEEEETT----EEEEEEEEETTEECHHHHHHHHTTC---CCTTSCCHHHHHHHCSEECGGG
T ss_pred             HHHHHHHHHhCCCHHHcEEEEEEECC----hhheEeeEECCEechHHHHHHHHHhccCCccccCcHHHHHhcCeeEcccc
Confidence            46889999999999999988544499    99999999998866422100    0    0  00                


Q ss_pred             ----hhhhHHHHHhh---hhHHHH--------------------HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEee
Q psy9582         219 ----NKNVFLPAISR---RGEEII--------------------SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIP  270 (329)
Q Consensus       219 ----~~~~l~~~v~~---~~~~i~--------------------~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~  270 (329)
                          ..++..++...   ++.++.                    ..++...+.   -.++ .++++|.+|. .++.++|.
T Consensus        81 ~Yy~~~~~~~~~~~~~~tra~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---e~a~-~ii~ai~~~~~~~~~vNv~  156 (253)
T d1up7a2          81 RYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYS---TAAA-HLIRDLETDEGKIHIVNTR  156 (253)
T ss_dssp             HHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGSTTTTHH---HHHH-HHHHHHHSSSCEEEEEEEE
T ss_pred             hhhcCcHHHHHHhccccChHHHHHHHHHHHHHHHHHHhhhhhhhhhccCcchH---HHHH-HHHHHHHcCCCcEEEEeCC
Confidence                13333333222   222221                    112222221   1133 8999999998 99999999


Q ss_pred             cCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9582         271 SDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILS  323 (329)
Q Consensus       271 ~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~  323 (329)
                      ++|. -++|+|+++++||++ ++|+.++-- .+|++...++++.-...-+-.+++
T Consensus       157 N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~~e~L~veA  210 (253)
T d1up7a2         157 NNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAVKMYERLTIEA  210 (253)
T ss_dssp             CTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCcCCCCChhhheEEEEEecCCccccccc-CCCcHHHHHHHHHHHHHHHHHHHH
Confidence            9998 689999999999999 999999877 899999888876644433333443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.82  E-value=1.9e-09  Score=89.84  Aligned_cols=73  Identities=12%  Similarity=0.261  Sum_probs=55.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~~al   81 (329)
                      .||+|+|| |.+|+++|..|...+.       +|.||+++    ++.++.+...-.+..    ..+..++++++++.+++
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~-------~V~l~~r~----~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~   75 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCR-------EVCVWHMN----EEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY   75 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEE-------EEEEECSC----HHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCC-------eEEEEEec----HHHHHHHhhcccccccccccccccccccchhhhhcc
Confidence            58999999 9999999999999887       89999998    444442221111110    11236899999999999


Q ss_pred             CCccEEEEe
Q psy9582          82 KDANIAILI   90 (329)
Q Consensus        82 ~~aDiVi~~   90 (329)
                      ++||+||++
T Consensus        76 ~~ad~iiia   84 (189)
T d1n1ea2          76 NGAEIILFV   84 (189)
T ss_dssp             TTCSCEEEC
T ss_pred             CCCCEEEEc
Confidence            999999997

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.76  E-value=4.6e-08  Score=79.13  Aligned_cols=93  Identities=19%  Similarity=0.218  Sum_probs=65.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||+ |.||+++|..|.+.|+       +|+.||++    .+.++ .+.+..     .   +....+..+++++||
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~-------~V~~~d~~----~~~~~-~a~~~~-----~---~~~~~~~~~~~~~~D   59 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGH-------YLIGVSRQ----QSTCE-KAVERQ-----L---VDEAGQDLSLLQTAK   59 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHHH-HHHHTT-----S---CSEEESCGGGGTTCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC-------EEEEEECC----chHHH-HHHHhh-----c---cceeeeecccccccc
Confidence            68999999 9999999999999987       99999998    44333 111111     1   111123457999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +||++.  |              ...+.++.+.+..+.+++++|+..++-
T Consensus        60 iIilav--p--------------~~~~~~vl~~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          60 IIFLCT--P--------------IQLILPTLEKLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             EEEECS--C--------------HHHHHHHHHHHGGGSCTTCEEEECCSC
T ss_pred             cccccC--c--------------Hhhhhhhhhhhhhhcccccceeecccc
Confidence            999973  2              135666777777777678777766553

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.73  E-value=1.1e-08  Score=84.45  Aligned_cols=101  Identities=14%  Similarity=0.179  Sum_probs=68.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--C-ccceEeecCcccccC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--L-LVDVSVHENPITAFK   82 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~-~~~i~~~~~~~~al~   82 (329)
                      |||+|||| |.+|+++|..|...+.       +|.||.+..  +++..+.....-.+...+  . ...+..++++.++++
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~-------~V~l~~r~~--~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   70 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN-------EVRIWGTEF--DTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE   70 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC-------EEEEECCGG--GHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEEecc--cHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh
Confidence            79999999 9999999999999887       899998751  122222221111111111  1 135667788889999


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||+||++.  |.              ..++++++++..+. ++..+++++
T Consensus        71 ~ad~Ii~av--ps--------------~~~~~~~~~l~~~l-~~~~ii~~t  104 (180)
T d1txga2          71 NAEVVLLGV--ST--------------DGVLPVMSRILPYL-KDQYIVLIS  104 (180)
T ss_dssp             TCSEEEECS--CG--------------GGHHHHHHHHTTTC-CSCEEEECC
T ss_pred             ccchhhccc--ch--------------hhhHHHHHhhcccc-ccceecccc
Confidence            999999973  22              46678888888887 444555554

>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.61  E-value=7.2e-07  Score=77.97  Aligned_cols=70  Identities=9%  Similarity=0.061  Sum_probs=59.6

Q ss_pred             HHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9582         253 HIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILS  323 (329)
Q Consensus       253 ~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~  323 (329)
                      .++++|.+|. .++.++|.++|. -++|+|+++++||++ ++|+.++-- .+|++..+++++.....-+-.+++
T Consensus       150 ~ii~ai~~~~~~~~~vNv~N~G~I~nLp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~~e~L~veA  222 (270)
T d1s6ya2         150 SLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIKSFERVAAEA  222 (270)
T ss_dssp             HHHHHHHHTCCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCeEEEEECCCCCcCCCCCccceEEEEEEEECCceEeeec-CCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8999999997 999999999998 689999999999999 999999876 899999998887655444444443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=5.6e-08  Score=78.31  Aligned_cols=101  Identities=13%  Similarity=0.131  Sum_probs=69.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|+|+ |.+|+.++..|.+.|.       +|.+++++    .+......  ..... ..........+..+++.++|
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~-------~V~~~~r~----~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~D   65 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH-------EVQGWLRV----PQPYCSVN--LVETD-GSIFNESLTANDPDFLATSD   65 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCSEEEEE--EECTT-SCEEEEEEEESCHHHHHTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC-------ceEEEEcC----HHHhhhhc--cccCC-ccccccccccchhhhhcccc
Confidence            79999999 9999999999999988       99999998    33332211  00110 01122334455678899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      +||++...                ....+..+.+..+.+++..|+.+.|=++
T Consensus        66 ~iii~vka----------------~~~~~~~~~l~~~~~~~~~Iv~~qNG~~  101 (167)
T d1ks9a2          66 LLLVTLKA----------------WQVSDAVKSLASTLPVTTPILLIHNGMG  101 (167)
T ss_dssp             EEEECSCG----------------GGHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred             eEEEeecc----------------cchHHHHHhhccccCcccEEeeccCccc
Confidence            99998321                2345667777777668888988888554

>d1u8xx2 d.162.1.2 (X:170-445) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.51  E-value=7.4e-07  Score=78.13  Aligned_cols=70  Identities=13%  Similarity=0.144  Sum_probs=58.8

Q ss_pred             HHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9582         253 HIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILS  323 (329)
Q Consensus       253 ~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~  323 (329)
                      .++++|.+|. .++.++|.++|. .++|+|+++++||+| ++|+.++-- .+|++..+++++.-...-+-.+++
T Consensus       157 ~ii~ai~~~~~~~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~k~~e~LtveA  229 (276)
T d1u8xx2         157 DLARAIAYNTGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQQVSVEKLTVEA  229 (276)
T ss_dssp             HHHHHHHHTCCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCcEEEEEeCCCCcCCCCChhhheeeEEEEcCCceEeeec-CCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8899999987 899999999998 799999999999999 999999887 999999988877644433333443

>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=98.41  E-value=1.8e-06  Score=76.86  Aligned_cols=60  Identities=15%  Similarity=0.198  Sum_probs=51.4

Q ss_pred             HHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHH-HHHH
Q psy9582         253 HIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRK-KINL  312 (329)
Q Consensus       253 ~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~-~l~~  312 (329)
                      .++++|.+|+ .++.++|.++|. -++|+|++++|||+| ++|+.++--..+|++.-.+ +++.
T Consensus       186 ~ii~ai~~~~~~~~~vNv~N~G~I~nLp~davVEVpc~v~~~Gi~P~~v~~~lP~~~~~gl~~~  249 (308)
T d1obba2         186 PFIDALLNDNKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLRP  249 (308)
T ss_dssp             HHHHHHHHCCCEEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCSSCCCHHHHHHTHHH
T ss_pred             HHHHHHHcCCCeEEEEECCCCCcCCCCCccceEEEEEEEeCCceeeeecCCCCChHHHHHHHHH
Confidence            7899999998 999999999998 789999999999999 9999998532689987654 4443

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.40  E-value=1.4e-07  Score=85.61  Aligned_cols=174  Identities=13%  Similarity=0.092  Sum_probs=101.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |++.|||.|+||+|++|++++..|++.|.       +|+.+|+...   ....   .++..... ...++.-..+..+++
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~-------~V~~~d~~~~---~~~~---~~~~~~~~-~~~D~~~~~~~~~~~   77 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGH-------YVIASDWKKN---EHMT---EDMFCDEF-HLVDLRVMENCLKVT   77 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCC---SSSC---GGGTCSEE-EECCTTSHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEeCCCc---cchh---hhcccCcE-EEeechhHHHHHHHh
Confidence            77889999999999999999999999987       8999998721   1111   11111000 001111112345568


Q ss_pred             CCccEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH----------HHHHHCC
Q psy9582          82 KDANIAILIGSFPRKS---NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY----------ITMKSAP  148 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~---g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~----------~~~~~~~  148 (329)
                      ++.|.||++++.....   ..........|+.....+.....+.. .. .+|..|--...-..          .....+ 
T Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk-~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~-  154 (363)
T d2c5aa1          78 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK-RFFYASSACIYPEFKQLETTNVSLKESDAW-  154 (363)
T ss_dssp             TTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CS-EEEEEEEGGGSCGGGSSSSSSCEECGGGGS-
T ss_pred             hcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhC-cc-ccccccccccccccccccccccccccccCC-
Confidence            8999999987654321   23455567789999999999988864 33 44444322110000          000011 


Q ss_pred             CCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC
Q psy9582         149 DLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL  192 (329)
Q Consensus       149 ~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~  192 (329)
                      ...|...-+.+-+...++.....+..|++..-++...|+|.++.
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~  198 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGT  198 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCc
Confidence            11122233444444555666666777877666665556776543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.40  E-value=2.5e-07  Score=74.53  Aligned_cols=92  Identities=11%  Similarity=0.151  Sum_probs=64.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||. |.||+++|..|+..|+       +|..||++    .++++.    +.+.      ......+..++++++|
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~-------~V~~~d~~----~~~~~~----~~~~------~~~~~~~~~e~~~~~d   58 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGY-------SLVVSDRN----PEAIAD----VIAA------GAETASTAKAIAEQCD   58 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSC----HHHHHH----HHHT------TCEECSSHHHHHHHCS
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCC-------eEEEEeCC----cchhHH----HHHh------hhhhcccHHHHHhCCC
Confidence            68999998 9999999999999998       99999998    444432    2221      1234456778999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQG---KALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~---~~i~~~~~p~a~viv~tN  134 (329)
                      +||++-..               -+.++++.   ..+.....++.++|..|+
T Consensus        59 ~ii~~v~~---------------~~~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          59 VIITMLPN---------------SPHVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             EEEECCSS---------------HHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             eEEEEcCC---------------HHHHHHHHhCCcchhhccCCCCEEEECCC
Confidence            99997321               13444444   334444456777777664

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=2.1e-06  Score=76.08  Aligned_cols=168  Identities=11%  Similarity=0.028  Sum_probs=99.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||.|+||+|++|++++..|++.|.       +|+.+|+..   ..+.+.    +.........++.-......++.++
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~-------~V~~~d~~~---~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~   66 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGH-------EVTVVDNFF---TGRKRN----VEHWIGHENFELINHDVVEPLYIEV   66 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS---SCCGGG----TGGGTTCTTEEEEECCTTSCCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCC---cCCHHH----HHHhcCCCceEEEehHHHHHHHcCC
Confidence            36999999999999999999999987       899999741   111111    1111100111222223345667899


Q ss_pred             cEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-------HHH-HHHHHCCCCCCCc
Q psy9582          85 NIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-------NTY-ITMKSAPDLSYKN  154 (329)
Q Consensus        85 DiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-------~~~-~~~~~~~~~~~~~  154 (329)
                      |+||++|+....  ...+..+.+..|+....++.+.+++.. .  .+|.+|-..-.       +.+ ...... .+.|..
T Consensus        67 d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~--k~I~~SS~~vy~~~~~~~~~e~~~~~~~-~~~p~~  142 (312)
T d2b69a1          67 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A--RLLLASTSEVYGDPEVHPQSEDYWGHVN-PIGPRA  142 (312)
T ss_dssp             SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C--EEEEEEEGGGGBSCSSSSBCTTCCCBCC-SSSTTH
T ss_pred             CEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C--cEEEEEChheecCCCCCCCCccccCCCC-CCCCcc
Confidence            999999875431  123456678899999999999998863 3  44444321100       000 000000 112222


Q ss_pred             EEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         155 FTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       155 i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      .-+.+-.....+....++..|++...++...|.|.+
T Consensus       143 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         143 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR  178 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCC
Confidence            334444444556666667778887777776678854

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.35  E-value=2.4e-06  Score=68.94  Aligned_cols=96  Identities=18%  Similarity=0.254  Sum_probs=62.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||+|||+ |.+|+++|..|.+.+...     +|+.+|++    .+.++ .+.+..     . .....+........++|+
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~-----~I~~~D~~----~~~~~-~a~~~~-----~-~~~~~~~~~~~~~~~~dl   65 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKG-----KIYGYDIN----PESIS-KAVDLG-----I-IDEGTTSIAKVEDFSPDF   65 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCS-----EEEEECSC----HHHHH-HHHHTT-----S-CSEEESCGGGGGGTCCSE
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCe-----EEEEEECC----hHHHH-HHHHhh-----c-chhhhhhhhhhhcccccc
Confidence            6999998 999999999999988643     89999998    43332 122221     1 111222223445578999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ||++.  |              ...+.++.+.+..+.+++.+++-++.-
T Consensus        66 Iila~--p--------------~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          66 VMLSS--P--------------VRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             EEECS--C--------------HHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             ccccC--C--------------chhhhhhhhhhhccccccccccccccc
Confidence            99973  1              134566666777776678777666543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=5.4e-07  Score=75.13  Aligned_cols=106  Identities=15%  Similarity=0.114  Sum_probs=66.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a   84 (329)
                      +||+|+||+|++|++++..|+..|.       +|++++++    .+++...    ....... ..++.-..++.++++++
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~~g~-------~V~~~~R~----~~~~~~~----~~~~~~~~~gD~~d~~~l~~al~~~   68 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQAGY-------EVTVLVRD----SSRLPSE----GPRPAHVVVGDVLQAADVDKTVAGQ   68 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----GGGSCSS----SCCCSEEEESCTTSHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEEcC----hhhcccc----cccccccccccccchhhHHHHhcCC
Confidence            6899999999999999999999987       89999998    4433211    1000000 01111123456789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+||.+.|........     ..+....+.+++.+++.. -. .+|.+|
T Consensus        69 d~vi~~~g~~~~~~~~-----~~~~~~~~~l~~aa~~~~-v~-r~i~~s  110 (205)
T d1hdoa_          69 DAVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHG-VD-KVVACT  110 (205)
T ss_dssp             SEEEECCCCTTCCSCC-----CHHHHHHHHHHHHHHHHT-CC-EEEEEC
T ss_pred             CEEEEEeccCCchhhh-----hhhHHHHHHHHHHHHhcC-CC-eEEEEe
Confidence            9999987754322111     123456667777777764 33 444443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.32  E-value=4.3e-07  Score=81.56  Aligned_cols=115  Identities=13%  Similarity=0.085  Sum_probs=72.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~al   81 (329)
                      |||.|+||+|++|++++..|++.|.       +|+++|+..    ...........+......    .++.-...+.+++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~-------~V~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   69 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVIILDNLC----NSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEIL   69 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS----SCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCC----CcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHH
Confidence            6899999999999999999999987       999999751    111111111111110111    1111111233455


Q ss_pred             C--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE
Q psy9582          82 K--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVV  132 (329)
Q Consensus        82 ~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~  132 (329)
                      +  ++|+||++|+.+..+  -....+.+..|+...+++.+.++++. ...+|...
T Consensus        70 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~S  123 (338)
T d1udca_          70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSS  123 (338)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEE
T ss_pred             hccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecC
Confidence            5  789999998754211  12345678899999999999999873 55444333

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=1.1e-06  Score=74.71  Aligned_cols=112  Identities=12%  Similarity=0.202  Sum_probs=72.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh-HhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV-IMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~-~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      +||.|+||+|++|++++..|++.+.+.     +|.+++++.    ...... ...+....    .++.-..+..++++++
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~-----~v~~~~R~~----~~~~~~~~~~i~~~~----~D~~~~~~~~~~~~~~   81 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFS-----KVTLIGRRK----LTFDEEAYKNVNQEV----VDFEKLDDYASAFQGH   81 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCS-----EEEEEESSC----CCCCSGGGGGCEEEE----CCGGGGGGGGGGGSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCC-----EEEEEecCh----hhhcccccceeeeee----eccccccccccccccc
Confidence            689999999999999999999988765     899999873    111111 00111000    0111123567789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |+|++++|... .......+...|.....++++...+.. ... ++.+|
T Consensus        82 d~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~-fi~~S  127 (232)
T d2bkaa1          82 DVGFCCLGTTR-GKAGAEGFVRVDRDYVLKSAELAKAGG-CKH-FNLLS  127 (232)
T ss_dssp             SEEEECCCCCH-HHHHHHHHHHHHTHHHHHHHHHHHHTT-CCE-EEEEC
T ss_pred             ccccccccccc-cccchhhhhhhcccccceeeecccccC-ccc-cccCC
Confidence            99999887542 112334556678888889998888753 453 44443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.16  E-value=1.8e-05  Score=70.71  Aligned_cols=108  Identities=11%  Similarity=0.038  Sum_probs=71.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH--hhhhhcccCC----ccceEeecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI--MEIEDCIFPL----LVDVSVHEN   76 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~--~dl~~~~~~~----~~~i~~~~~   76 (329)
                      .+.++|.|+||+|++|++++..|++.|.       +|+...++    ..+.....  .+..... ..    ..++.-...
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-------~V~~~vR~----~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~   76 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGY-------KVRGTARS----ASKLANLQKRWDAKYPG-RFETAVVEDMLKQGA   76 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHSTT-TEEEEECSCTTSTTT
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEeCC----chhHHHHHHhhhccccc-cccEEEeccccchhh
Confidence            4568999999999999999999999987       88877776    33332211  1111100 00    011111123


Q ss_pred             cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          77 PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      ..+++.++|.|+..++... ...+.......|+....++.+.+.++.
T Consensus        77 ~~~~~~~~~~v~~~a~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~  122 (342)
T d1y1pa1          77 YDEVIKGAAGVAHIASVVS-FSNKYDEVVTPAIGGTLNALRAAAATP  122 (342)
T ss_dssp             TTTTTTTCSEEEECCCCCS-CCSCHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             hhhhcccchhhhhhccccc-ccccccccccchhhhHHHHHHhhhccc
Confidence            4578999999999876543 334555666779999999999998863

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=98.12  E-value=9.1e-07  Score=70.45  Aligned_cols=65  Identities=17%  Similarity=0.202  Sum_probs=49.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||++||+ |++|++++..|...+.       ++.++|++    .++++.....+         .+..+.+..+++++||
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~-------~i~v~~r~----~~~~~~l~~~~---------g~~~~~~~~~~~~~~d   59 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPH-------ELIISGSS----LERSKEIAEQL---------ALPYAMSHQDLIDQVD   59 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSC-------EEEEECSS----HHHHHHHHHHH---------TCCBCSSHHHHHHTCS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCC-------eEEEEcCh----HHhHHhhcccc---------ceeeechhhhhhhccc
Confidence            68999998 9999999999988765       89999998    55554332222         1233456778899999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +||++.
T Consensus        60 vIilav   65 (152)
T d2ahra2          60 LVILGI   65 (152)
T ss_dssp             EEEECS
T ss_pred             eeeeec
Confidence            999973

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=98.09  E-value=2.3e-06  Score=70.77  Aligned_cols=120  Identities=13%  Similarity=0.211  Sum_probs=70.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh--------hhhcccCCccceEeecCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME--------IEDCIFPLLVDVSVHENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d--------l~~~~~~~~~~i~~~~~~   77 (329)
                      |||+|||. |++|.++|..++ .|.       +|+.+|++    +++++....-        +.+.......++..+++.
T Consensus         1 MkI~ViGl-G~vGl~~a~~~a-~g~-------~V~g~Din----~~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~   67 (196)
T d1dlja2           1 MKIAVAGS-GYVGLSLGVLLS-LQN-------EVTIVDIL----PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDS   67 (196)
T ss_dssp             CEEEEECC-SHHHHHHHHHHT-TTS-------EEEEECSC----HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred             CEEEEECC-ChhHHHHHHHHH-CCC-------cEEEEECC----HHHHHHHhhcccccchhhHHHHhhhhhhhhhccchh
Confidence            68999998 999999997664 566       89999999    4444322110        000000011355666677


Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHHH
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYITM  144 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~~  144 (329)
                      ..+..++|+++++...|.....+.     .....+....+.+... ++..++++-| =|....-.+..
T Consensus        68 ~~~~~~~~ii~v~vpt~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~iii~Stv~pgt~~~~~~  129 (196)
T d1dlja2          68 KAAYKEAELVIIATPTNYNSRINY-----FDTQHVETVIKEVLSV-NSHATLIIKSTIPIGFITEMRQ  129 (196)
T ss_dssp             HHHHHHCSEEEECCCCCEETTTTE-----ECCHHHHHHHHHHHHH-CSSCEEEECSCCCTTHHHHHHH
T ss_pred             hhhhhccccccccCCccccccCCC-----cceeEEeehhhhhhhc-ccceeEEeeeecCceeeeeeee
Confidence            788899999999866654221110     0113444555555555 3666655554 35555444433

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=98.09  E-value=2.9e-06  Score=67.35  Aligned_cols=64  Identities=9%  Similarity=0.193  Sum_probs=47.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||++||+ |++|++++..|+..+..      +|.++|++    .++++....++         .+....+ .++++++|
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~------~i~v~~r~----~~~~~~l~~~~---------~~~~~~~-~~~v~~~D   59 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGY------RIYIANRG----AEKRERLEKEL---------GVETSAT-LPELHSDD   59 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSC------EEEEECSS----HHHHHHHHHHT---------CCEEESS-CCCCCTTS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCC------cEEEEeCC----hhHHHHhhhhc---------ccccccc-cccccccc
Confidence            68999999 99999999988876621      89999999    55554332211         2344454 46789999


Q ss_pred             EEEEe
Q psy9582          86 IAILI   90 (329)
Q Consensus        86 iVi~~   90 (329)
                      +||++
T Consensus        60 iv~la   64 (152)
T d1yqga2          60 VLILA   64 (152)
T ss_dssp             EEEEC
T ss_pred             eEEEe
Confidence            99997

>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Putative alpha-glucosidase TM0752
species: Thermotoga maritima [TaxId: 2336]

Probab=98.08  E-value=3.7e-05  Score=66.97  Aligned_cols=49  Identities=12%  Similarity=0.173  Sum_probs=44.3

Q ss_pred             HHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCC
Q psy9582         253 HIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEI  302 (329)
Q Consensus       253 ~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l  302 (329)
                      .++++|.+|+ .++.++|.++|. -++|+|+++++||+| ++|+.++-- .++
T Consensus       157 ~ii~ai~~~~~~~~~vNv~N~G~I~nLp~davVEVpc~Vd~~Gi~P~~v-g~~  208 (278)
T d1vjta2         157 PFINAIANNKRVRLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKV-EPD  208 (278)
T ss_dssp             HHHHHHHHCCCEEEEEEEECTTSSTTSCSSSEEEEEEEEETTEEEECCC-CSC
T ss_pred             HHHHHHhCCCCeEEEEECCCCCcCCCCCchhheEeEEEEeCCceeeeec-CCC
Confidence            7899999997 999999999998 789999999999999 999999865 444

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.07  E-value=1.9e-06  Score=76.37  Aligned_cols=116  Identities=11%  Similarity=0.130  Sum_probs=71.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCc-cceEeecCcccccCCc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLL-VDVSVHENPITAFKDA   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~-~~i~~~~~~~~al~~a   84 (329)
                      ||.|+||+|++|++++..|++.|+       +|+.+|.-..  ..... ....+.... ..+. .++.-..+..+++++.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-------~V~~id~~~~--~~~~~-~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-------DLIVFDNLSR--KGATD-NLHWLSSLGNFEFVHGDIRNKNDVTRLITKY   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCS--TTHHH-HHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-------EEEEEECCCc--ccchh-HHHHhhccCCcEEEEcccCCHHHHHHHHHhc
Confidence            899999999999999999999987       8999985410  11111 111111110 0000 1111112234455554


Q ss_pred             --cEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 --NIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 --DiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        |+||++|+......  .+.......|+...+.+.+...+.. ..-.++..|
T Consensus        72 ~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS  123 (338)
T d1orra_          72 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSS  123 (338)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEE
T ss_pred             CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccc
Confidence              99999987543211  2345677889999999999999875 554555554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.06  E-value=8e-06  Score=65.40  Aligned_cols=64  Identities=17%  Similarity=0.319  Sum_probs=48.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      +||++||. |.||+++|..|++.|+       +|..||++    .++.+    ++...      ......+..++++++|
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~-------~v~~~d~~----~~~~~----~~~~~------~~~~~~~~~e~~~~~d   59 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGY-------LLNVFDLV----QSAVD----GLVAA------GASAARSARDAVQGAD   59 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSS----HHHHH----HHHHT------TCEECSSHHHHHTSCS
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCC-------eEEEEECc----hhhhh----hhhhh------hccccchhhhhccccC
Confidence            47999998 9999999999999988       99999998    44333    23222      1223345678999999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +|+++.
T Consensus        60 iii~~v   65 (162)
T d3cuma2          60 VVISML   65 (162)
T ss_dssp             EEEECC
T ss_pred             eeeecc
Confidence            999873

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.99  E-value=8.3e-06  Score=67.77  Aligned_cols=109  Identities=17%  Similarity=0.142  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||.|+||+|++|++++..|++.+...     +|....++......++.....|+.             ........+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~-----~v~~~~r~~~~~~~~~~~~~~d~~-------------~~~~~~~~~~   63 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLA-----KVIAPARKALAEHPRLDNPVGPLA-------------ELLPQLDGSI   63 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCC-----EEECCBSSCCCCCTTEECCBSCHH-------------HHGGGCCSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeE-----EEEEEeCCchhhcccccccccchh-------------hhhhccccch
Confidence            5799999999999999999999988643     566555441110111111111111             1112234467


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |.||.++|...........+...|......+++..++.. .. .++.+|
T Consensus        64 d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~-~~i~~S  110 (212)
T d2a35a1          64 DTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-AR-HYLVVS  110 (212)
T ss_dssp             SEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CC-EEEEEC
T ss_pred             heeeeeeeeeccccccccccccchhhhhhhccccccccc-cc-cccccc
Confidence            999998776543333455667788888889998888753 44 444444

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.98  E-value=2.9e-06  Score=77.42  Aligned_cols=119  Identities=9%  Similarity=0.121  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------------hhhcccCCccce
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------------IEDCIFPLLVDV   71 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------------l~~~~~~~~~~i   71 (329)
                      .+||.|+||+|++|++++..|++.|.       +|+.+|.-    ..+.......             +.........++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-------~V~~iDnl----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   69 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-------EVCIVDNL----VRRLFDHQLGLESLTPIASIHDRISRWKALTGKSI   69 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECC----HHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEecC----CcccccccccccccccccchHHHHHHHHhhcCCCc
Confidence            37999999999999999999999997       99999942    1000000000             000000000112


Q ss_pred             Ee-ecC------cccccCC--ccEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          72 SV-HEN------PITAFKD--ANIAILIGSFPRKS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        72 ~~-~~~------~~~al~~--aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .. ..|      +.+++++  .|+|+++|+....+  ..+   .......|+.....+.+.+.++. .+..++..|.-
T Consensus        70 ~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~  146 (393)
T d1i24a_          70 ELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTM  146 (393)
T ss_dssp             EEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCG
T ss_pred             EEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc-cccceeecccc
Confidence            21 112      2334553  49999998754311  122   23456789999999999999985 77677666644

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=3.6e-06  Score=75.21  Aligned_cols=105  Identities=14%  Similarity=0.169  Sum_probs=67.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCc-ccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENP-ITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~-~~al~~   83 (329)
                      |||.|+||+|++|++++..|++.+..      +|+.+|+.    ....... .+....  .+. .+++...+. ..+.++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~------~V~~ld~~----~~~~~~~-~~~~~~--~~i~~Di~~~~~~~~~~~~~   67 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIG----SDAISRF-LNHPHF--HFVEGDISIHSEWIEYHVKK   67 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC------EEEEEESC----CGGGGGG-TTCTTE--EEEECCTTTCSHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC------EEEEEeCC----Ccchhhh-ccCCCe--EEEECccCChHHHHHHHHhC
Confidence            68999999999999999999988743      89999987    2222111 110000  000 111111111 236778


Q ss_pred             ccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          84 ANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        84 aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      +|+||++|+......  ......+..|+....++++.+.+..
T Consensus        68 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~  109 (342)
T d2blla1          68 CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR  109 (342)
T ss_dssp             CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             CCccccccccccccccccCCcccccccccccccccccccccc
Confidence            999999987643221  1234567899999999999998863

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.93  E-value=6.1e-06  Score=67.05  Aligned_cols=100  Identities=12%  Similarity=0.181  Sum_probs=65.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .+|+|||. |.||+++|..|++.|+       +|+.||++    +++++....+-.... .. .......+..+++.++|
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~-------~V~v~dr~----~~~~~~l~~~~~~~~-~~-~~a~~~~~~~~~~~~~~   68 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGF-------VVCAFNRT----VSKVDDFLANEAKGT-KV-LGAHSLEEMVSKLKKPR   68 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----THHHHHHHHTTTTTS-SC-EECSSHHHHHHHBCSSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHHHHHhccccc-cc-cchhhhhhhhhhhcccc
Confidence            46999999 9999999999999998       89999999    555543221111100 00 01111234567889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      .++++...               .+.+.++...+....+++.++|..|+
T Consensus        69 ~ii~~~~~---------------~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          69 RIILLVKA---------------GQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             EEEECSCT---------------THHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             eEEEecCc---------------hHHHHHHHHHHHhccccCcEEEecCc
Confidence            99987321               13555566666767667777777764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.90  E-value=5.3e-05  Score=59.57  Aligned_cols=35  Identities=17%  Similarity=0.269  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+||+|||+.|.||+++|..|.+.|+       +|.++|++
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~-------~V~~~d~~   42 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGY-------PISILDRE   42 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTC-------CEEEECTT
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCC-------CcEecccc
Confidence            346999999449999999999999998       89999998

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=1.1e-05  Score=72.64  Aligned_cols=171  Identities=8%  Similarity=-0.001  Sum_probs=90.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhhcccCCccceEee-------cCcc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIEDCIFPLLVDVSVH-------ENPI   78 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~~   78 (329)
                      ++.|+||+|++|++++..|++.|.       +|+.+|+.... +.++++....+..    ....++.+.       .+..
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~   71 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGY-------EVHGIKRRASSFNTERVDHIYQDPH----TCNPKFHLHYGDLSDTSNLT   71 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-------EEEEECC-------------------------CCEEECCCCSSCHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC-------EEEEEECCCcccchhhHHHHHhhhh----hcCCCeEEEEeecCCHHHHH
Confidence            455999999999999999999987       99999985110 0122221111110    011122221       1223


Q ss_pred             cccCCc--cEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCC-CeEEEEEcCchhh--HHHH-HHHHCCCC
Q psy9582          79 TAFKDA--NIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASR-DVKVLVVGNPVNT--NTYI-TMKSAPDL  150 (329)
Q Consensus        79 ~al~~a--DiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p-~a~viv~tNP~~~--~~~~-~~~~~~~~  150 (329)
                      +.+++.  |+|+++++....  +..+....+..|+.....+.+.+++++-. ...+|.+|-..-.  -... +.+.. .+
T Consensus        72 ~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~-~~  150 (357)
T d1db3a_          72 RILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT-PF  150 (357)
T ss_dssp             HHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS-CC
T ss_pred             HHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCC-CC
Confidence            455555  999999876532  23455667788999999999999886422 3456655521100  0000 00111 12


Q ss_pred             CCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEec
Q psy9582         151 SYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGN  189 (329)
Q Consensus       151 ~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~  189 (329)
                      .|...-+.+-+....+....++..+++..-++...|.|.
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp  189 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESP  189 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCC
Confidence            232233344444445555666677776665554335564

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=97.83  E-value=3.5e-06  Score=74.82  Aligned_cols=192  Identities=10%  Similarity=0.036  Sum_probs=107.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-------ecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-------HENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-------~~~~~   78 (329)
                      |||.|+||+|++|++++..|++.|.--. ...++..+|...-  ....    ..+......  ..++.       .....
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~-~~~~i~~~d~~~~--~~~~----~~~~~~~~~--~~~~~~~~d~~~~~~~~   71 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV-PADEVIVLDSLTY--AGNR----ANLAPVDAD--PRLRFVHGDIRDAGLLA   71 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTS-CCSEEEEEECCCT--TCCG----GGGGGGTTC--TTEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCcc-CCceEEEEeCCCc--cccH----hHhhhhhcC--CCeEEEEeccccchhhh
Confidence            6899999999999999999998775210 0117888886510  1111    111111000  11111       11224


Q ss_pred             cccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH--H-HHHHHCCCCCCC
Q psy9582          79 TAFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT--Y-ITMKSAPDLSYK  153 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~--~-~~~~~~~~~~~~  153 (329)
                      ....+.|.|+++|+.+...  .......+..|+.....+.+.+.++. .. .+|..|...-.-.  . -+.+.+ .+.|.
T Consensus        72 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~-~~I~~Ss~~~yg~~~~~~~~E~~-~~~p~  148 (322)
T d1r6da_          72 RELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VG-RVVHVSTNQVYGSIDSGSWTESS-PLEPN  148 (322)
T ss_dssp             HHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CC-EEEEEEEGGGGCCCSSSCBCTTS-CCCCC
T ss_pred             ccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-Cc-eEEEeecceeecCCCCCCCCCCC-CCCCC
Confidence            4578999999988765321  12344567889999999999999874 44 4444442210000  0 000112 12222


Q ss_pred             cEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC--CceeecccCCeecceehh
Q psy9582         154 NFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS--LSMYPDYRYATVNGVLIR  209 (329)
Q Consensus       154 ~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg--~~~~p~~s~~~v~~~p~~  209 (329)
                      ..-+.+-.....+...+++..+++...++...|.|.+.  +..+|.|-+.-..|.|+.
T Consensus       149 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~  206 (322)
T d1r6da_         149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLP  206 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcE
Confidence            23344444444556666778888888887766788543  445666654444555543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.82  E-value=4.6e-05  Score=67.96  Aligned_cols=116  Identities=12%  Similarity=0.046  Sum_probs=69.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--e--cCccccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--H--ENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--~--~~~~~al   81 (329)
                      +.|.|+||+|++|++++..|+..|.       +|+.+|...   ..... ..............-+..  +  .++.+++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-------~V~~~d~~~---~~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~   70 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-------DCVVADNLS---NSTYD-SVARLEVLTKHHIPFYEVDLCDRKGLEKVF   70 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCS---SCCTH-HHHHHHHHHTSCCCEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-------eEEEEECCC---Ccchh-HHHhHHhhcccCCeEEEeecCCHHHHHHHH
Confidence            4688999999999999999999987       899999641   11111 111111100011111111  0  1122233


Q ss_pred             C--CccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 K--DANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~--~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +  +.|+||++|+....  ...........|+.....+.+..++.. ...++...|
T Consensus        71 ~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS  125 (347)
T d1z45a2          71 KEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSS  125 (347)
T ss_dssp             HHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEE
T ss_pred             hccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecc
Confidence            3  78999999876531  122445566789999999999998873 555544444

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.81  E-value=9.9e-06  Score=66.65  Aligned_cols=80  Identities=11%  Similarity=0.121  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCc-cceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLL-VDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~-~~i~~~~~~~~al   81 (329)
                      +.++|.|+||+|.+|..++..|++.|.       +|++.|++    .++++.....+..... ... .++....+..+++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   90 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGA-------EVVLCGRK----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAV   90 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhcc-------chhhcccc----hHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh
Confidence            357999999999999999999999997       89999999    5556544444432110 110 1122223456678


Q ss_pred             CCccEEEEeCCCC
Q psy9582          82 KDANIAILIGSFP   94 (329)
Q Consensus        82 ~~aDiVi~~~g~~   94 (329)
                      .++|+||.++|.+
T Consensus        91 ~~iDilin~Ag~g  103 (191)
T d1luaa1          91 KGAHFVFTAGAIG  103 (191)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             cCcCeeeecCccc
Confidence            9999999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.81  E-value=3.9e-05  Score=60.45  Aligned_cols=63  Identities=11%  Similarity=0.139  Sum_probs=45.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|||. |.+|+.++..|.+.|+       ++..+|.+    .......   .....     .+  ..+..++++++|
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~-------~v~~~~~~----~~~~~~~---~~~~~-----~~--~~~~~e~~~~~d   58 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGV-------EVVTSLEG----RSPSTIE---RARTV-----GV--TETSEEDVYSCP   58 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC-------EEEECCTT----CCHHHHH---HHHHH-----TC--EECCHHHHHTSS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCC-------eEEEEcCc----hhHHHHH---hhhcc-----cc--cccHHHHHhhcC
Confidence            68999998 9999999999999987       89999987    2222111   11110     11  233568899999


Q ss_pred             EEEEe
Q psy9582          86 IAILI   90 (329)
Q Consensus        86 iVi~~   90 (329)
                      +||++
T Consensus        59 iIi~~   63 (152)
T d1i36a2          59 VVISA   63 (152)
T ss_dssp             EEEEC
T ss_pred             eEEEE
Confidence            99997

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.79  E-value=3.5e-05  Score=62.33  Aligned_cols=100  Identities=13%  Similarity=0.219  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec---Cccccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE---NPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~---~~~~al   81 (329)
                      +|||+|||. |.||.++|..|+..|+       +|..||++    +++.+.........  ....+.....   +....+
T Consensus         1 ~MkIGvIGl-G~MG~~ma~~L~~~G~-------~V~~~dr~----~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~   66 (178)
T d1pgja2           1 SMDVGVVGL-GVMGANLALNIAEKGF-------KVAVFNRT----YSKSEEFMKANASA--PFAGNLKAFETMEAFAASL   66 (178)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS----HHHHHHHHHHTTTS--TTGGGEEECSCHHHHHHHB
T ss_pred             CCEEEEEee-hHHHHHHHHHHHHCCC-------eEEEEECC----HHHHHHHHHcCCcc--ccccchhhhhhhhHHHHhc
Confidence            478999998 9999999999999998       89999999    55554333222211  1112222222   223355


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..++.++.....    +           .........+..+..++.+++..|
T Consensus        67 ~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          67 KKPRKALILVQA----G-----------AATDSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             CSSCEEEECCCC----S-----------HHHHHHHHHHHHHCCTTCEEEECC
T ss_pred             ccceEEEEeecC----c-----------chhhhhhhhhhhhccccceecccC
Confidence            666666665211    1           233344455555555666666655

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.77  E-value=0.00012  Score=66.15  Aligned_cols=178  Identities=12%  Similarity=0.082  Sum_probs=93.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcc-----cccchhhhHhhhhhccc--C--CccceEe-
Q psy9582           5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKK-----SQKAIKGVIMEIEDCIF--P--LLVDVSV-   73 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~-----~~~~~~~~~~dl~~~~~--~--~~~~i~~-   73 (329)
                      .|||.|+||+|++|++++..|++ ++.       +|+.+|.-...     ..+..+.....+.....  .  ....+.+ 
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-------~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH-------SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALE   74 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-------EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC-------EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEE
Confidence            37999999999999999999986 566       89999952000     01111112222222111  0  1112222 


Q ss_pred             ecCc------c---cccCCccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch-h--hH
Q psy9582          74 HENP------I---TAFKDANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV-N--TN  139 (329)
Q Consensus        74 ~~~~------~---~al~~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~-~--~~  139 (329)
                      ..|.      .   +..+++|+|+++|+......  .........|+.....+.+...+.. ...++...+--+ .  ..
T Consensus        75 ~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~  153 (383)
T d1gy8a_          75 VGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTM  153 (383)
T ss_dssp             ESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC
T ss_pred             ECcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccc
Confidence            2222      1   23457899999987643211  1334456789999999999999874 554443322100 0  00


Q ss_pred             HHHHHHHC-----CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         140 TYITMKSA-----PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       140 ~~~~~~~~-----~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      -....+..     ....|....+.+-+...++.....+..|++...++...+.|..
T Consensus       154 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH  209 (383)
T ss_dssp             -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred             ccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccC
Confidence            00000000     0112222333444444555566666778777666665566643

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.72  E-value=1.5e-06  Score=78.75  Aligned_cols=188  Identities=9%  Similarity=0.080  Sum_probs=102.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecCc------c
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HENP------I   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~~------~   78 (329)
                      |||.|+||+|++|++++..|++.+.-      .+.++|...  ......    .+.+..  ...++.. ..|.      .
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~------vv~~~d~~~--~~~~~~----~~~~~~--~~~~~~~~~~Dl~d~~~l~   66 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQD------TVVNIDKLT--YAGNLE----SLSDIS--ESNRYNFEHADICDSAEIT   66 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC------EEEEEECCC--TTCCGG----GGTTTT--TCTTEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC------EEEEEeCCC--ccccHH----HHHhhh--hcCCcEEEEccCCCHHHHH
Confidence            68999999999999999999998862      467788651  011111    111111  0112222 1221      2


Q ss_pred             cccC--CccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCC--------eEEEEEcCch------h-hH
Q psy9582          79 TAFK--DANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRD--------VKVLVVGNPV------N-TN  139 (329)
Q Consensus        79 ~al~--~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~--------a~viv~tNP~------~-~~  139 (329)
                      +.++  +.|+||++|+.+..+.  .+....+..|+.....+.+.+.++. ..        ..+|..|--.      . ..
T Consensus        67 ~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~-~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (361)
T d1kewa_          67 RIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYW-SALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHH-HTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             HHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhh-hhhhhcccCceEEEEeccceeeCCCccCCc
Confidence            2233  5799999987543110  1234567788888888888777652 11        1444443211      0 00


Q ss_pred             HH------HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC--CceeecccCCeecceehh
Q psy9582         140 TY------ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS--LSMYPDYRYATVNGVLIR  209 (329)
Q Consensus       140 ~~------~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg--~~~~p~~s~~~v~~~p~~  209 (329)
                      .+      ...+.. ...|...-|.+-+...++....++..+++...++...|+|.++  ++.+|.+-+.-..|.|+.
T Consensus       146 ~~~~~~~~~~~e~~-~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~  222 (361)
T d1kewa_         146 VENSVTLPLFTETT-AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (361)
T ss_dssp             SCTTSCCCCBCTTS-CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEE
T ss_pred             cccccCCCCcccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcE
Confidence            00      000000 1112223444545556666677778898888888877888765  345666544444555543

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00016  Score=56.50  Aligned_cols=96  Identities=11%  Similarity=0.027  Sum_probs=57.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||+|+||+|.+|+-+...|+....+..   .+++++..+.    .  .+........   ..  ........++++++|+
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~---~~l~~~~ss~----s--~g~~~~~~~~---~~--~~~~~~~~~~~~~~Di   68 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDA---IRPVFFSTSQ----L--GQAAPSFGGT---TG--TLQDAFDLEALKALDI   68 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGG---SEEEEEESSS----T--TSBCCGGGTC---CC--BCEETTCHHHHHTCSE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCe---eEEEEeeccc----c--ccccccccCC---ce--eeecccchhhhhcCcE
Confidence            899999999999999987776643321   2888887661    1  1111111111   11  1111223457899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|++.+.                ...+++++.+.+.. .+++||-.|
T Consensus        69 vF~a~~~----------------~~s~~~~~~~~~~g-~~~~VID~S   98 (146)
T d1t4ba1          69 IVTCQGG----------------DYTNEIYPKLRESG-WQGYWIDAA   98 (146)
T ss_dssp             EEECSCH----------------HHHHHHHHHHHHTT-CCCEEEECS
T ss_pred             EEEecCc----------------hHHHHhhHHHHhcC-CCeecccCC
Confidence            9998431                45667777776653 445544443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.68  E-value=6.1e-05  Score=67.02  Aligned_cols=115  Identities=11%  Similarity=0.071  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe----ecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV----HENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~----~~~~~~a   80 (329)
                      .+||.|+||+|++|++++..|++.|.       +|+.+|++.    ........... .. +....+..    .....++
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~-------~V~~~~r~~----~~~~~~~~~~~-~~-~~i~~~~~Dl~d~~~l~~~   74 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGA-------TVKGYSLTA----PTVPSLFETAR-VA-DGMQSEIGDIRDQNKLLES   74 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC----SSSSCHHHHTT-TT-TTSEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCC----CccHHHHhhhh-cc-cCCeEEEeeccChHhhhhh
Confidence            48999999999999999999999997       999999983    22221111111 00 00101111    0112334


Q ss_pred             cC--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          81 FK--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        81 l~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ++  ..|+|+++++.+...  ..........|+.....+.+.+.+.. ....++..|
T Consensus        75 ~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-~~~~~~~~s  130 (356)
T d1rkxa_          75 IREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNIT  130 (356)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEEC
T ss_pred             hhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccc-ccccccccc
Confidence            44  348888887654211  12334556779999999999999874 454554444

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=6.9e-05  Score=63.88  Aligned_cols=151  Identities=15%  Similarity=0.175  Sum_probs=90.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE---eecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS---VHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~---~~~~~~~a   80 (329)
                      +.+++.|+||++.+|.++|..|++.|.       +|.+.|++    ++.++....++.... .+..+++   ......+.
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~l~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~   73 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-------RVVAVSRT----QADLDSLVRECPGIE-PVCVDLGDWEATERALGS   73 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECC----HHHHHHHHHhcCCCe-EEEEeCCCHHHHHHHHHH
Confidence            457899999999999999999999997       89999999    555654444443211 0000110   01122345


Q ss_pred             cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHHH
Q psy9582          81 FKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTYITM  144 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~~  144 (329)
                      +..-|++|..+|.....   ..+   ....+..|+.    ..+.+++.+.+. +..+.|++++--.      ....|..+
T Consensus        74 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~-~~~g~Ii~isS~~~~~~~~~~~~Y~as  152 (244)
T d1pr9a_          74 VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR-GVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh-CCcceEeecccccccccccchhhhhhh
Confidence            67889999988865421   122   3344555555    455566654443 2467777776322      23333333


Q ss_pred             HHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         145 KSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       145 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      |..               -..+.+.+|..++  |..|+..
T Consensus       153 Kaa---------------l~~lt~~lA~el~--~~gIrvN  175 (244)
T d1pr9a_         153 KGA---------------LDMLTKVMALELG--PHKIRVN  175 (244)
T ss_dssp             HHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HHH---------------HHHHHHHHHHHhC--CCcEEEE
Confidence            322               1346677777775  5677755

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.66  E-value=5.4e-05  Score=64.64  Aligned_cols=150  Identities=14%  Similarity=0.130  Sum_probs=89.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------ENP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~   77 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++....++......+..+++-.       ...
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   74 (244)
T d1nffa_           6 GKVALVSGGARGMGASHVRAMVAEGA-------KVVFGDIL----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTA   74 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHH
Confidence            46778889999999999999999998       89999999    5666655555543211110011000       111


Q ss_pred             ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHH
Q psy9582          78 ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTY  141 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~  141 (329)
                      .+.+..-|++|..+|.... +  ..+   +...+..|+.    .++...+.+.+.  +.+.||+++-..      +...|
T Consensus        75 ~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~Ii~isS~~~~~~~~~~~~Y  152 (244)
T d1nffa_          75 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA--GRGSIINISSIEGLAGTVACHGY  152 (244)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc--CcceEEeccccccccccccccch
Confidence            2335678999999886432 1  222   3344555554    455566666664  467777876433      23344


Q ss_pred             HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         142 ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       142 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .+.|..               -..+.+.+|..++  +..|+..
T Consensus       153 ~asKaa---------------l~~ltk~lA~el~--~~gIrVN  178 (244)
T d1nffa_         153 TATKFA---------------VRGLTKSTALELG--PSGIRVN  178 (244)
T ss_dssp             HHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             hhHHHH---------------HHHHHHHHHHHhc--ccCEEEE
Confidence            444432               1346667777765  5567654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.63  E-value=3.7e-05  Score=59.10  Aligned_cols=102  Identities=17%  Similarity=0.211  Sum_probs=59.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-ccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-ITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-~~al~~a   84 (329)
                      |||.|+|+ |.+|+.++..|...|.       +++++|.+    +++++....++ +.. -...+..-..-+ ...+++|
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~-------~v~vid~d----~~~~~~~~~~~-~~~-vi~Gd~~~~~~l~~~~i~~a   66 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH-------DIVLIDID----KDICKKASAEI-DAL-VINGDCTKIKTLEDAGIEDA   66 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHC-SSE-EEESCTTSHHHHHHTTTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-------CcceecCC----hhhhhhhhhhh-hhh-hccCcccchhhhhhcChhhh
Confidence            68999999 9999999999999887       99999999    55554322221 110 000000000111 2337899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN  137 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~  137 (329)
                      |.++.+...           -..|+.    ++...+.+. ++.++..+.+|..
T Consensus        67 ~~vv~~t~~-----------d~~N~~----~~~~~k~~~-~~~iI~~~~~~~~  103 (132)
T d1lssa_          67 DMYIAVTGK-----------EEVNLM----SSLLAKSYG-INKTIARISEIEY  103 (132)
T ss_dssp             SEEEECCSC-----------HHHHHH----HHHHHHHTT-CCCEEEECSSTTH
T ss_pred             hhhcccCCc-----------HHHHHH----HHHHHHHcC-CceEEEEecCHHH
Confidence            998886221           134432    222334554 5656656666653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.61  E-value=3.5e-05  Score=66.51  Aligned_cols=99  Identities=16%  Similarity=0.186  Sum_probs=64.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      |||.|+||+|++|++++..|...+        +++.+|.+    .....   .|+.+..           ...+.++  +
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g--------~~v~~~~~----~~~~~---~Dl~~~~-----------~~~~~i~~~~   54 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG--------NLIALDVH----SKEFC---GDFSNPK-----------GVAETVRKLR   54 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS--------EEEEECTT----CSSSC---CCTTCHH-----------HHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC--------CEEEEECC----Ccccc---CcCCCHH-----------HHHHHHHHcC
Confidence            689999999999999999888766        46667776    22111   2332211           1223343  3


Q ss_pred             ccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          84 ANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        84 aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .|+||++|+...  ............|......+.+..++..   .+++++|
T Consensus        55 ~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~s  103 (298)
T d1n2sa_          55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG---AWVVHYS  103 (298)
T ss_dssp             CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT---CEEEEEE
T ss_pred             CCEEEEecccccccccccCccccccccccccccchhhhhccc---ccccccc
Confidence            599999988643  1123455566788888888888887753   3444444

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.61  E-value=3.8e-05  Score=66.01  Aligned_cols=152  Identities=16%  Similarity=0.166  Sum_probs=89.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------EN   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~   76 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|++.|++    .++++....++......+..+++-.       ..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~   72 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-------RVAIADIN----LEAARATAAEIGPAACAIALDVTDQASIDRCVAE   72 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-------EEEEEESC----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHH
Confidence            457888999999999999999999997       89999999    5666655555432110000011100       11


Q ss_pred             cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHH
Q psy9582          77 PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNT  140 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~  140 (329)
                      ..+.+..-|++|..+|.... +  ..+   ....+..|+.    ..+.+++.+.+.. ..+.||+++-..      ....
T Consensus        73 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~-~~g~Iv~isS~~~~~~~~~~~~  151 (256)
T d1k2wa_          73 LLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG-RGGKIINMASQAGRRGEALVGV  151 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhc-cCCccccccchhhccccccccc
Confidence            12234578999999886532 2  122   3445566654    4455566655543 457777776332      2223


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      |.++|..               -..+.+.+|..++  +..|+.-
T Consensus       152 Y~asKaa---------------l~~lt~~lA~el~--~~gIrVN  178 (256)
T d1k2wa_         152 YCATKAA---------------VISLTQSAGLNLI--RHGINVN  178 (256)
T ss_dssp             HHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             hhhhhhH---------------HHHHHHHHHHHhc--ccCeEEE
Confidence            3333321               1346667777765  5567654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00084  Score=57.28  Aligned_cols=155  Identities=18%  Similarity=0.195  Sum_probs=92.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEee-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVH-----   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~-----   74 (329)
                      .+.+.|+||++.+|.++|..|++.|.       .|++.|++    +++++..+.+++....+. .    .+++-.     
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~-------~Vv~~~r~----~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~   78 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGL-------KVVGCART----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILS   78 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHH
Confidence            46788999999999999999999998       89999998    666766665665432110 0    011000     


Q ss_pred             --cCcccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcCchh-----
Q psy9582          75 --ENPITAFKDANIAILIGSFPRK-S--NME---RSELLAIN----SSIFIEQGKALNSVASRDVKVLVVGNPVN-----  137 (329)
Q Consensus        75 --~~~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tNP~~-----  137 (329)
                        ....+.+..-|++|..+|.... +  ..+   ....+..|    ....+.+++.+.+....++.||+++-...     
T Consensus        79 ~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p  158 (257)
T d1xg5a_          79 MFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP  158 (257)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS
T ss_pred             HHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCC
Confidence              1122335678999998876432 1  122   33344445    44566677777765334678877764332     


Q ss_pred             ---hHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEE
Q psy9582         138 ---TNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVF  185 (329)
Q Consensus       138 ---~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~  185 (329)
                         ...|-.+|..               -..+.+.+|..|.-.+..|+...
T Consensus       159 ~~~~~~Y~~sKaa---------------l~~ltr~la~el~~~~~~I~vn~  194 (257)
T d1xg5a_         159 LSVTHFYSATKYA---------------VTALTEGLRQELREAQTHIRATC  194 (257)
T ss_dssp             CGGGHHHHHHHHH---------------HHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CcccHHHHHHHHH---------------HHhCHHHHHHHHHhCCCCEEEEE
Confidence               2223333321               13466677777754556777553

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=8.5e-05  Score=63.23  Aligned_cols=152  Identities=13%  Similarity=0.104  Sum_probs=87.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCc-cceEeecCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLL-VDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~-~~i~~~~~~~~al   81 (329)
                      +.+++.|+||++.+|.+++..|++.|.       +|.+.|++    ++.++....++..... .+. .+........+.+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-------KVVAVTRT----NSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI   72 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc
Confidence            457899999999999999999999997       89999998    5555544444432110 000 0000001123346


Q ss_pred             CCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHHHH
Q psy9582          82 KDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTYITMK  145 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~~~  145 (329)
                      ..-|++|..+|.... +  ..+   ....+..|+.    ..+...+.+.+.. ..+.+|+++-..      +...|.+.|
T Consensus        73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG-VPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhc-ccCcccccchhhccccCCccccccchH
Confidence            788999999886542 1  122   3344555555    4444555544432 456777776432      233333333


Q ss_pred             HCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         146 SAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       146 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..               -..+.+.+|..++  |..|+..
T Consensus       152 aa---------------l~~lt~~lA~e~~--~~gIrvN  173 (242)
T d1cyda_         152 GA---------------MTMLTKAMAMELG--PHKIRVN  173 (242)
T ss_dssp             HH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HH---------------HHHHHHHHHHHhC--ccCeecc
Confidence            32               1346667777765  5667755

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00017  Score=63.96  Aligned_cols=115  Identities=10%  Similarity=0.088  Sum_probs=64.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCccc--ccchhhhHhhhhhcccCCccceEe--e--cCccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKS--QKAIKGVIMEIEDCIFPLLVDVSV--H--ENPIT   79 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~--~~~~~~~~~dl~~~~~~~~~~i~~--~--~~~~~   79 (329)
                      .||.|+||+|++|++++..|++.|.       +|+.+|......  ..........+.........-+..  +  ..+.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-------~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~   75 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-------LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-------CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-------EEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccc
Confidence            4899999999999999999999987       899998631000  000000011111110011100111  1  11233


Q ss_pred             ccCC--ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeE
Q psy9582          80 AFKD--ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVK  128 (329)
Q Consensus        80 al~~--aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~  128 (329)
                      ++.+  .|+|+++|+.+...  .....+.+..|+.....+...++++. ...+
T Consensus        76 ~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~  127 (346)
T d1ek6a_          76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNL  127 (346)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEE
T ss_pred             cccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccc
Confidence            3443  45677777754311  11345667889999999999998874 4433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.57  E-value=3.5e-05  Score=62.24  Aligned_cols=45  Identities=16%  Similarity=0.311  Sum_probs=37.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE   61 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~   61 (329)
                      |||+||||+|.+|+++|..|+..|.       +|++++++    +++++..+..+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~-------~V~l~~R~----~e~~~~l~~~i~   45 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH-------EIVVGSRR----EEKAEAKAAEYR   45 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESS----HHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHH
Confidence            6899997669999999999999998       99999999    666665555554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.57  E-value=2.1e-05  Score=70.10  Aligned_cols=176  Identities=13%  Similarity=0.032  Sum_probs=99.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cC------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-EN------   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~------   76 (329)
                      ++++|.|+||+|++|++++..|.+.|.       +|..+|+............ ..+...  ....++... .|      
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-------~V~~~d~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~d~~d~~~   84 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-------KVVGLDNFATGHQRNLDEV-RSLVSE--KQWSNFKFIQGDIRNLDD   84 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCCHHHHHHH-HHHSCH--HHHTTEEEEECCTTSHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEECCCCcchhhHHHH-HHhhhh--cccCCeeEEeeccccccc
Confidence            357999999999999999999999998       9999997411111111111 111100  000112111 11      


Q ss_pred             cccccCCccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH-H-HHHHHCCCCCC
Q psy9582          77 PITAFKDANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT-Y-ITMKSAPDLSY  152 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~-~-~~~~~~~~~~~  152 (329)
                      ......+.|.|++++....-  ...+.......|+.....+.+.+.+.. ...+|...|..+=--. . -..+.++ ..|
T Consensus        85 ~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~-~~p  162 (341)
T d1sb8a_          85 CNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTI-GKP  162 (341)
T ss_dssp             HHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCC-CCC
T ss_pred             cccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCC-CCC
Confidence            23456788888887654331  123455677889999999999999874 5555544443220000 0 0001121 222


Q ss_pred             CcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         153 KNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       153 ~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      ...-+.+-+...++...+++..+++..-++...|.|.++
T Consensus       163 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~  201 (341)
T d1sb8a_         163 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQ  201 (341)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred             CCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCc
Confidence            233444555556666677778788877777544677654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.56  E-value=5.6e-05  Score=59.29  Aligned_cols=97  Identities=14%  Similarity=0.069  Sum_probs=57.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      |||+|+||+|.+|+-+...|.....+..   .++.++..+.      ..+...+...   .. ..+ ......+.++++|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~---~~i~~~ss~~------~~gk~~~~~~---~~-~~~-~~~~~~~~~~~~D   66 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDL---IEPVFFSTSQ------IGVPAPNFGK---DA-GML-HDAFDIESLKQLD   66 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGG---SEEEEEESSC------CSSBCCCSSS---CC-CBC-EETTCHHHHTTCS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCc---eEEEEecccc------ccccccccCC---cc-eee-ecccchhhhcccc
Confidence            6899999999999999988776432210   2788776551      1121111111   01 111 1223356789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +||++.+.                ...+++++.+.+.. .+++||=.|
T Consensus        67 vvF~alp~----------------~~s~~~~~~l~~~g-~~~~VIDlS   97 (147)
T d1mb4a1          67 AVITCQGG----------------SYTEKVYPALRQAG-WKGYWIDAA   97 (147)
T ss_dssp             EEEECSCH----------------HHHHHHHHHHHHTT-CCSEEEESS
T ss_pred             EEEEecCc----------------hHHHHHhHHHHHcC-CceEEEeCC
Confidence            99998421                45667777777654 555554333

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.56  E-value=0.00014  Score=61.49  Aligned_cols=112  Identities=13%  Similarity=0.115  Sum_probs=70.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+++.|+||++.+|.+++..|++.|.       +|++.|++    ++.++........+  .....+   ....+.+..-
T Consensus         4 gK~~lVTGas~GIG~aia~~l~~~Ga-------~V~~~~r~----~~~l~~~~~~~~~~--Dv~~~~---~~~~~~~g~i   67 (234)
T d1o5ia_           4 DKGVLVLAASRGIGRAVADVLSQEGA-------EVTICARN----EELLKRSGHRYVVC--DLRKDL---DLLFEKVKEV   67 (234)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHTCSEEEEC--CTTTCH---HHHHHHSCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHhcCCcEEEc--chHHHH---HHHHHHhCCC
Confidence            47899999999999999999999997       89999998    44443211100000  000000   1234567889


Q ss_pred             cEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |++|..+|.+...   ..+   ....+..|+.    ..+.+.+.+++.  ..+.+|+++.
T Consensus        68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~G~ii~i~S  125 (234)
T d1o5ia_          68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK--GWGRIVAITS  125 (234)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECC
T ss_pred             cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc--cccccccccc
Confidence            9999998876432   123   2333444544    566667777764  4566666653

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.53  E-value=0.00013  Score=62.60  Aligned_cols=150  Identities=13%  Similarity=0.078  Sum_probs=88.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------ENP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~   77 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++....++......+..+++-.       ...
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGA-------RVVLADVL----DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHH
Confidence            46899999999999999999999998       89999998    5555554444432110000011000       111


Q ss_pred             ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHH
Q psy9582          78 ITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTY  141 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~  141 (329)
                      .+.+..-|++|..||.....   ..+   ....+..|+.    ..+.+.+.+++.  ..+.||+++--.      +...|
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--~~G~II~isS~~~~~~~~~~~~Y  151 (254)
T d1hdca_          74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA--GGGSIVNISSAAGLMGLALTSSY  151 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc--CCCeecccccchhcccccchhhH
Confidence            23356789999998864321   122   3345555554    555566666664  467777776332      23333


Q ss_pred             HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         142 ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       142 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .++|..               -..+.+.+|..++  +..|+..
T Consensus       152 ~asKaa---------------l~~lt~~lA~e~a--~~gIrVN  177 (254)
T d1hdca_         152 GASKWG---------------VRGLSKLAAVELG--TDRIRVN  177 (254)
T ss_dssp             HHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HHHHHH---------------HHHHHHHHHHHhC--CCceEEE
Confidence            333332               1346667777764  4567654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=6.5e-05  Score=64.01  Aligned_cols=150  Identities=17%  Similarity=0.167  Sum_probs=88.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-------ecCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-------HENP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-------~~~~   77 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++..+.++......+..+++-       ....
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~-------~Vv~~~r~----~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGA-------KVIGTATS----ENGAQAISDYLGANGKGLMLNVTDPASIESVLEKI   72 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhh
Confidence            35677889999999999999999998       89999999    566655444443211011001100       0112


Q ss_pred             ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHH
Q psy9582          78 ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTY  141 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~  141 (329)
                      .+.+..-|++|..||......   .+   ....+..|+.    .++.+.+.|.+.  ..+.||+++-..      +...|
T Consensus        73 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~II~isS~~~~~~~~~~~~Y  150 (243)
T d1q7ba_          73 RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK--RHGRIITIGSVVGTMGNGGQANY  150 (243)
T ss_dssp             HHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCHHHHHCCTTCHHH
T ss_pred             hcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc--CCCEeeeecchhhcCCCCCCHHH
Confidence            234567899999888643221   22   3344555554    555666676664  467788877432      12223


Q ss_pred             HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         142 ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       142 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .++|..               -..+.+.+|..++  +..|+..
T Consensus       151 ~asKaa---------------l~~lt~~lA~ela--~~gIrVN  176 (243)
T d1q7ba_         151 AAAKAG---------------LIGFSKSLAREVA--SRGITVN  176 (243)
T ss_dssp             HHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HHHHHH---------------HHHHHHHHHHHhC--ccCeEEE
Confidence            232221               2346677777775  5567654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.51  E-value=2.4e-05  Score=62.68  Aligned_cols=73  Identities=8%  Similarity=0.105  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||.|+|| |.+|+++|..|.+.|+       +|+++|++    .++++..+..+....... ..........+.+...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~-------~V~v~dr~----~~~a~~l~~~~~~~~~~~-~~~~~~~~~~~~i~~~   68 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGI-------KVTVACRT----LESAKKLSAGVQHSTPIS-LDVNDDAALDAEVAKH   68 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC-------EEEEEESC----HHHHHHHHTTCTTEEEEE-CCTTCHHHHHHHHTTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEECC----hHHHHHHHhccccccccc-ccccchhhhHhhhhcc
Confidence            479999999 9999999999999987       89999999    565554433332211000 0000111234557888


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+++.+
T Consensus        69 ~~~i~~   74 (182)
T d1e5qa1          69 DLVISL   74 (182)
T ss_dssp             SEEEEC
T ss_pred             ceeEee
Confidence            888875

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.51  E-value=4e-05  Score=68.37  Aligned_cols=174  Identities=13%  Similarity=0.024  Sum_probs=91.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~a   84 (329)
                      |||.|+||+|++|++++..|++.|.-     +.++.+|....  ..... ....+......+. .+++-.....+++++.
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~-----v~v~~~d~~~~--~~~~~-~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~   74 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPD-----VHVTVLDKLTY--AGNKA-NLEAILGDRVELVVGDIADAELVDKLAAKA   74 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTT-----CEEEEEECCCT--TCCGG-GTGGGCSSSEEEEECCTTCHHHHHHHHTTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCC-----eEEEEEeCCCc--cccHH-HHHHhhcCCeEEEEccCCCHHHHHHHHhhh
Confidence            57999999999999999999988762     14555664310  00000 0001111000000 1111112335567899


Q ss_pred             cEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHH--------HHHCC
Q psy9582          85 NIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV------NTNTYIT--------MKSAP  148 (329)
Q Consensus        85 DiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~--------~~~~~  148 (329)
                      |.|++.|+......  .+..+.+..|+.....+.....+.. .. ++...|.-+      ..-....        ...+ 
T Consensus        75 ~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k-~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~-  151 (346)
T d1oc2a_          75 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IR-FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET-  151 (346)
T ss_dssp             SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CE-EEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS-
T ss_pred             hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-cc-ccccccceEecccCccccccccccCcccccccCC-
Confidence            99999876543221  2334567889999999999888874 33 333322211      0000000        0000 


Q ss_pred             CCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         149 DLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       149 ~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                      ...|...-|.+-+...++....++..+++..-++...|+|.+
T Consensus       152 ~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         152 NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPY  193 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCC
Confidence            111122233444444555556667777777667666667854

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.51  E-value=0.0004  Score=59.29  Aligned_cols=150  Identities=17%  Similarity=0.165  Sum_probs=89.1

Q ss_pred             CEE-EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEe-------e
Q psy9582           6 VRI-SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSV-------H   74 (329)
Q Consensus         6 ~kI-~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~-------~   74 (329)
                      +|| .|+||++.+|.++|..|++.|.       .|++.|++    +++++..+.++.+.....   ..+++-       .
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~   69 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGF-------AVAIADYN----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAV   69 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            466 6779999999999999999998       89999999    666665555665432110   001100       0


Q ss_pred             cCcccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hh
Q psy9582          75 ENPITAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NT  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~  138 (329)
                      ....+.+..-|++|..||.... +  ..+   ....+..|+.    .++...+.+.+.. ..+.|++++-..      +.
T Consensus        70 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~~~~~~~  148 (255)
T d1gega_          70 EQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG-HGGKIINACSQAGHVGNPEL  148 (255)
T ss_dssp             HHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhc-cccccccccchhhcccCccc
Confidence            1112335689999999886432 1  122   3345555654    4445566666653 567777776332      22


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|.++|..               -..+.+.+|..++  +..|+.-
T Consensus       149 ~~Y~asKaa---------------l~~ltk~lA~el~--~~gIrVN  177 (255)
T d1gega_         149 AVYSSSKFA---------------VRGLTQTAARDLA--PLGITVN  177 (255)
T ss_dssp             HHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             ccchhCHHH---------------HHhhHHHHHHHhh--hhCcEEE
Confidence            333333322               1346667777765  5567754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.46  E-value=0.00018  Score=61.06  Aligned_cols=117  Identities=14%  Similarity=0.148  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-c---ceE-eecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-V---DVS-VHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~---~i~-~~~~~~   78 (329)
                      +.+++.|+||++.+|.++|..|++.|.       +|.+.|++    +++++....++......+. .   .+. .-....
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   72 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-------RLVACDIE----EGPLREAAEAVGAHPVVMDVADPASVERGFAEAL   72 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHH
Confidence            567899999999999999999999998       89999999    5555543333321110110 0   110 001123


Q ss_pred             cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          79 TAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.+..-|++|..||.....   ..+   ....+..|+.    ..+.+.+.+.+.  ..+.+++.+
T Consensus        73 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~~~i~~~s  135 (242)
T d1ulsa_          73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK--NPGSIVLTA  135 (242)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEEC
T ss_pred             HhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc--ccceeeeec
Confidence            3456789999998875422   122   3344555655    444555666553  345555554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00074  Score=57.25  Aligned_cols=117  Identities=15%  Similarity=0.108  Sum_probs=74.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEee-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVH-------   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~-------   74 (329)
                      .+.+.|+||++.+|..+|..|++.|.       +|++.|++    +++++..+.++........   .+++-.       
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~-------~V~l~~r~----~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKS-------KLVLWDIN----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            35677889999999999999999997       99999999    6667666666654221100   011000       


Q ss_pred             cCcccccCCccEEEEeCCCCCCCC--C----CHHHHHHHHH----HHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSN--M----ERSELLAINS----SIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g--~----~~~~~~~~n~----~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ....+.+..-|++|..+|......  .    ...+.+..|+    ..++.+.+.+.+.  ..+.||+++-
T Consensus        76 ~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~G~Iv~isS  143 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN--NHGHIVTVAS  143 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc--CCceEEEeec
Confidence            011234667899999988654322  1    1223444443    4566677888774  4677777764

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.44  E-value=8.2e-05  Score=59.21  Aligned_cols=72  Identities=7%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..||.|||+ |.+|..++..|...+.-      ++.++.++    .++++.....+..       ......++.+++.++
T Consensus        24 ~~~ilviGa-G~~g~~v~~~L~~~g~~------~i~v~nRt----~~ka~~l~~~~~~-------~~~~~~~~~~~l~~~   85 (159)
T d1gpja2          24 DKTVLVVGA-GEMGKTVAKSLVDRGVR------AVLVANRT----YERAVELARDLGG-------EAVRFDELVDHLARS   85 (159)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCS------EEEEECSS----HHHHHHHHHHHTC-------EECCGGGHHHHHHTC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhcCCc------EEEEEcCc----HHHHHHHHHhhhc-------ccccchhHHHHhccC
Confidence            479999999 99999999999988752      79999998    5555544443321       111124667889999


Q ss_pred             cEEEEeCCCC
Q psy9582          85 NIAILIGSFP   94 (329)
Q Consensus        85 DiVi~~~g~~   94 (329)
                      |+||.+.+.+
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999986654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.41  E-value=0.00063  Score=57.90  Aligned_cols=117  Identities=13%  Similarity=0.171  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC---ccceEee-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL---LVDVSVH-----   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~---~~~i~~~-----   74 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|.+.|++    .++++..+.++.+.. ...   ..+++-.     
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~   72 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-------SVVVASRN----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKK   72 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHH
Confidence            346889999999999999999999998       89999999    555554444553321 000   0011000     


Q ss_pred             --cCcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          75 --ENPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        75 --~~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        ....+.+..-|++|..+|......   .+   ....+..|+.    ..+.+++.|++.  ..+.||+++
T Consensus        73 ~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~Ii~i~  141 (251)
T d1vl8a_          73 LLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES--DNPSIINIG  141 (251)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC--SSCEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc--ccccccccc
Confidence              111233557899999988653221   22   3344555554    555566666654  345666654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.40  E-value=0.00012  Score=62.62  Aligned_cols=117  Identities=14%  Similarity=0.101  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------ENP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~   77 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++..+.++......+..+++-.       ...
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   74 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGA-------KVAFSDIN----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECSC----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHH
Confidence            36788889999999999999999998       89999998    5666655555532211100011000       112


Q ss_pred             ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          78 ITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      .+.+..-|++|..+|.....   ..+   ....+..|+.    ..+...+.|++   ..+.||+++-.
T Consensus        75 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~G~Iv~isS~  139 (253)
T d1hxha_          75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE---TGGSIINMASV  139 (253)
T ss_dssp             HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---TCEEEEEECCG
T ss_pred             HHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh---cCCceecccch
Confidence            23456789999998865321   122   3344555644    45566666654   24777777643

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.39  E-value=7.7e-05  Score=63.32  Aligned_cols=115  Identities=12%  Similarity=0.175  Sum_probs=71.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+++.|+||++.+|.+++..|++.|.       +|.+.|++++. .+.+.....|+.+...  ...  ......+.+..-
T Consensus         7 gK~~lITGas~GIG~aia~~la~~Ga-------~V~~~~r~~~~-~~~~~~~~~Dv~~~~~--v~~--~~~~~~~~~g~i   74 (237)
T d1uzma1           7 SRSVLVTGGNRGIGLAIAQRLAADGH-------KVAVTHRGSGA-PKGLFGVEVDVTDSDA--VDR--AFTAVEEHQGPV   74 (237)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSSCC-CTTSEEEECCTTCHHH--HHH--HHHHHHHHHSSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCcch-hcCceEEEEecCCHHH--HHH--HHHHHHHhcCCc
Confidence            46899999999999999999999997       89999998422 2222233445443210  000  011224456678


Q ss_pred             cEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          85 NIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        85 DiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      |++|..+|.... +  ..+   ....+..|+.    ..+.+++.+.+.  ..+.||+++
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~g~Iv~is  131 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN--KFGRMIFIG  131 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc--CCCceEEEc
Confidence            999999886432 1  122   3344555555    455666777764  466777776

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.39  E-value=0.001  Score=56.81  Aligned_cols=150  Identities=15%  Similarity=0.106  Sum_probs=87.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEee-----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVH-----   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~-----   74 (329)
                      .+.+.|+||++.+|.+++..|++.|.       +|++.|++    .++++....++....... .    .+++-.     
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~   72 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGA-------KLSLVDVS----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEA   72 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHH
Confidence            45788999999999999999999997       89999999    555654444443321110 0    011000     


Q ss_pred             --cCcccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch-----
Q psy9582          75 --ENPITAFKDANIAILIGSFPR--KS--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV-----  136 (329)
Q Consensus        75 --~~~~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~-----  136 (329)
                        ....+.+..-|++|..||...  .+  ..+   ....+..|+.    ..+.+.+.+++.  ..+.||+++-..     
T Consensus        73 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~G~Ii~isS~~~~~~~  150 (258)
T d1iy8a_          73 YVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ--GSGMVVNTASVGGIRGI  150 (258)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSBC
T ss_pred             HHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh--cCCCCcccccHhhccCC
Confidence              011233567899999988532  22  123   3344555554    445555666654  456677765322     


Q ss_pred             -hhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         137 -NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       137 -~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                       +...|..+|..               -..+.+.+|..++  |..|+..
T Consensus       151 ~~~~~Y~asKaa---------------l~~lt~~lA~el~--~~gIrVN  182 (258)
T d1iy8a_         151 GNQSGYAAAKHG---------------VVGLTRNSAVEYG--RYGIRIN  182 (258)
T ss_dssp             SSBHHHHHHHHH---------------HHHHHHHHHHHHG--GGTCEEE
T ss_pred             CCchHHHHHHHH---------------HHHHHHHHHHHhC--ccCceEE
Confidence             23334343332               1345667777765  5567654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=9.5e-05  Score=64.68  Aligned_cols=160  Identities=12%  Similarity=0.084  Sum_probs=89.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||.|+||+|++|++++..|++.|.       ++++.|..    .+      .|+.+..  ...+      .. ...+.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~-------~vi~~~~~----~~------~~~~~~~--~~~~------~~-~~~~~   55 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGD-------VELVLRTR----DE------LNLLDSR--AVHD------FF-ASERI   55 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-------EEEECCCT----TT------CCTTCHH--HHHH------HH-HHHCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcC-------EEEEecCc----hh------ccccCHH--HHHH------HH-hhcCC
Confidence            36999999999999999999999887       66676665    11      1221110  0000      00 11246


Q ss_pred             cEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHHHHHCCCCCCCcE
Q psy9582          85 NIAILIGSFPRKS---NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV------NTNTYITMKSAPDLSYKNF  155 (329)
Q Consensus        85 DiVi~~~g~~~~~---g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~~~~~~~~~~~~i  155 (329)
                      |+|+++++.....   .....+.+..|+....++.+.+.++. -.-+|..-|.-+      ..+++-.....+-.+++..
T Consensus        56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~  134 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP  134 (315)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHH
T ss_pred             CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCH
Confidence            7888876543211   12345567789999999999998873 443433333111      0000000000000111112


Q ss_pred             EEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582         156 TAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS  191 (329)
Q Consensus       156 ~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg  191 (329)
                      -+.+-+...++.....+..|++..-++...|+|.++
T Consensus       135 Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         135 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence            334444455665666777788877778777788754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.38  E-value=0.00032  Score=59.06  Aligned_cols=154  Identities=10%  Similarity=-0.003  Sum_probs=84.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc--cC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA--FK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a--l~   82 (329)
                      +.||.|+||+|.+|.+++..|++.|.       +|+++|+++.+..........|.....  ....  ......+.  ..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~g   70 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-------TVLNIDLSANDQADSNILVDGNKNWTE--QEQS--ILEQTASSLQGS   70 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESSCCTTSSEEEECCTTSCHHH--HHHH--HHHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCchhcccccceeccccCchh--HHHH--HHHHHHHHhcCC
Confidence            35899999999999999999999997       899999983110000000000000000  0000  00011111  24


Q ss_pred             CccEEEEeCCCCC--CC-CCC----HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHHHHHCCC
Q psy9582          83 DANIAILIGSFPR--KS-NME----RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV------NTNTYITMKSAPD  149 (329)
Q Consensus        83 ~aDiVi~~~g~~~--~~-g~~----~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~~~~~~~  149 (329)
                      .-|++|..||...  .+ ..+    ....+..|+.....+++...++..+.+.|++++-..      +...|.++|..  
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa--  148 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAA--  148 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH--
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHH--
Confidence            4699999888532  11 122    223456677665555555555544567777776322      22333333332  


Q ss_pred             CCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         150 LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       150 ~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                                   -..|...+|.+++-.+..|+..
T Consensus       149 -------------l~~l~~~la~e~~~~~~~i~v~  170 (235)
T d1ooea_         149 -------------VHHLTSSLAAKDSGLPDNSAVL  170 (235)
T ss_dssp             -------------HHHHHHHHHSTTSSCCTTCEEE
T ss_pred             -------------HHHHHHHHHHHhccCCCceEEE
Confidence                         2356777777776556677754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.38  E-value=4.9e-05  Score=67.18  Aligned_cols=173  Identities=9%  Similarity=-0.044  Sum_probs=88.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhhcccCCccceEee-cC------c
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIEDCIFPLLVDVSVH-EN------P   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~~~~i~~~-~~------~   77 (329)
                      +|+.|+||+|++|++++..|++.|+       +|+.+|+..+. +.+++.....+.....   ...+... .|      .
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~~~   71 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-------EVHGLIRRSSNFNTQRINHIYIDPHNVN---KALMKLHYADLTDASSL   71 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-------EEEEEECCCcccchhhhhhhhhhhhhcc---ccceEEEEccccCHHHH
Confidence            5889999999999999999999998       99999985210 1222221111111110   0112211 11      1


Q ss_pred             cccc--CCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcC---CCeEEEEEcCchhhHHH---HHHHHC
Q psy9582          78 ITAF--KDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVAS---RDVKVLVVGNPVNTNTY---ITMKSA  147 (329)
Q Consensus        78 ~~al--~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~---p~a~viv~tNP~~~~~~---~~~~~~  147 (329)
                      ...+  .+.|+|+++|+.....  ..........|......+...+++.+.   ...+++..+.-. ....   ...+..
T Consensus        72 ~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~~~~~~~E~~  150 (339)
T d1n7ha_          72 RRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGSTPPPQSETT  150 (339)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTSCSSBCTTS
T ss_pred             HHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce-ecccCCCCCCCCC
Confidence            2222  3569999998764321  123345566676666666666554320   122333332111 1000   000112


Q ss_pred             CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582         148 PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH  190 (329)
Q Consensus       148 ~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h  190 (329)
                       -+.|...-+.+-+.+..+....++..+++...++...|.|.+
T Consensus       151 -~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         151 -PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPR  192 (339)
T ss_dssp             -CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             -CCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCC
Confidence             122333344555555556566667777766666655556754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.38  E-value=0.0012  Score=56.80  Aligned_cols=115  Identities=14%  Similarity=0.101  Sum_probs=71.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eec--------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHE--------   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~--------   75 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|.+.|++    +++++....++.+..... .++. +..        
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga-------~V~l~~r~----~~~l~~~~~~l~~~~~~~-~~~~~~~~Dvs~~~~v   72 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGA-------NVTITGRS----SERLEETRQIILKSGVSE-KQVNSVVADVTTEDGQ   72 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTTCCG-GGEEEEECCTTSHHHH
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCC-CceEEEEccCCCHHHH
Confidence            46788999999999999999999997       89999999    666665555554432110 0111 111        


Q ss_pred             -----CcccccCCccEEEEeCCCCCCC-------CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 -----NPITAFKDANIAILIGSFPRKS-------NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 -----~~~~al~~aDiVi~~~g~~~~~-------g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                           ...+.+..-|++|..+|.....       .++   ....+..|+.    ..+...+.+++.  +..+|++.|
T Consensus        73 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S  147 (272)
T d1xkqa_          73 DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSS  147 (272)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred             HHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCccccccc
Confidence                 1122345789999998865321       122   3334455554    455566666653  455665554

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.37  E-value=0.00089  Score=56.92  Aligned_cols=150  Identities=21%  Similarity=0.211  Sum_probs=88.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEee-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVH-------   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~-------   74 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    ++.++..+.++.+.....   ..+++-.       
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga-------~V~~~~r~----~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~   78 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVS-------HVICISRT----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI   78 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS-------EEEEEESS----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            34566779999999999999999997       89999998    666665555665432110   0011000       


Q ss_pred             cCcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCchh------h
Q psy9582          75 ENPITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPVN------T  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~~------~  138 (329)
                      ....+.+..-|++|..+|.....   ..+   ....+..|+.    ..+..++.+.+.  ..+.||+++-...      .
T Consensus        79 ~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~IVnisS~~~~~~~~~~  156 (251)
T d2c07a1          79 NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN--RYGRIINISSIVGLTGNVGQ  156 (251)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH--TCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC--CCeEEEEECCHHhcCCCCCC
Confidence            01123356889999988764322   122   3344455544    456666777764  4677777764322      2


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|.++|..               -..+.+.+|..++  +..|+.-
T Consensus       157 ~~Y~asKaa---------------l~~ltr~lA~el~--~~gIrVN  185 (251)
T d2c07a1         157 ANYSSSKAG---------------VIGFTKSLAKELA--SRNITVN  185 (251)
T ss_dssp             HHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HHHHHHHHH---------------HHHHHHHHHHHhh--hhCeEEE
Confidence            223333321               1346667777765  5567754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.36  E-value=0.0012  Score=56.73  Aligned_cols=115  Identities=13%  Similarity=0.138  Sum_probs=71.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eecC-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHEN-------   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~-------   76 (329)
                      .+.+.|+||++.+|.++|..|++.|.       .|++.|++    +++++..+.++.....+. .++. +..|       
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~i~~~~~~~-~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGA-------QVTITGRN----EDRLEETKQQILKAGVPA-EKINAVVADVTEASGQ   71 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCG-GGEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHcCCCC-cceEEEEeeCCCHHHH
Confidence            46789999999999999999999997       89999999    666666555554432110 0111 1111       


Q ss_pred             ------cccccCCccEEEEeCCCCCCCC-----CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 ------PITAFKDANIAILIGSFPRKSN-----ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ------~~~al~~aDiVi~~~g~~~~~g-----~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                            ..+.+..-|++|..+|.....+     ++   ....+..|+.    ..+...+.+.+.  ..+.|++.+
T Consensus        72 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~g~ii~~s  144 (274)
T d1xhla_          72 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT--KGEIVNVSS  144 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             HHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc--ccccccchh
Confidence                  1223456799999888543211     23   2234444544    555666666653  466766654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00022  Score=60.65  Aligned_cols=158  Identities=8%  Similarity=0.015  Sum_probs=86.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~   83 (329)
                      .+.+.|+||++.+|.++|..|+..|.       +|++.|++    +++++............+. ..-.......+.+..
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~-------~Vi~~~r~----~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREGA-------KVIATDIN----ESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHhccCCceeeeecccccccccccccccc
Confidence            46788889999999999999999997       99999999    5555432221110000000 000011122344668


Q ss_pred             ccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCC
Q psy9582          84 ANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYK  153 (329)
Q Consensus        84 aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~  153 (329)
                      -|++|..+|.....   ..+   ....+..|+.    ..+.+.+.+.+.  +.+.|++++-.....       . +.+..
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--~~g~Ii~isS~~~~~-------~-~~~~~  144 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ--KSGNIINMSSVASSV-------K-GVVNR  144 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCSBTTT-------B-CCTTB
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC--CCceeeeeechhhcc-------C-Cccch
Confidence            89999998875431   123   2233444433    555666666664  567777776433210       0 11110


Q ss_pred             cEEEechhHHHHHHHHHHHHhCCCCCCeeEEE
Q psy9582         154 NFTAMLRLDHNRAIAKLASKLNEPVSSIKKVF  185 (329)
Q Consensus       154 ~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~  185 (329)
                      -..+.+--.-..+.+.+|..++  ++.|+...
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~--~~gIrvN~  174 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFI--QQGIRCNC  174 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh--hhCcEEEE
Confidence            0112211112456778888776  55777553

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.33  E-value=0.00021  Score=60.61  Aligned_cols=157  Identities=15%  Similarity=0.158  Sum_probs=91.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-------cCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-------ENP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-------~~~   77 (329)
                      .+++.|+||++.+|..+|..|++.|.       +|++.+++    .++++....++......+..+++-.       ...
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i   73 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGA-------SLVAVDRE----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEA   73 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHH
Confidence            46888999999999999999999998       99999999    5555544444432110000011000       112


Q ss_pred             ccccCCccEEEEeCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCC
Q psy9582          78 ITAFKDANIAILIGSFPR-KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLS  151 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~-~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~  151 (329)
                      .+.+..-|++|..+|... .+  ..+   ....+..|+.....+.+...++......+++.|.....-..-..-|+    
T Consensus        74 ~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~----  149 (241)
T d2a4ka1          74 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYA----  149 (241)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHH----
T ss_pred             HHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccc----
Confidence            333567899999877543 22  122   34556778777777777766666555566666643221111111111    


Q ss_pred             CCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         152 YKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       152 ~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|    ..+  ..+.+.+|+.++  +..|+.-
T Consensus       150 ~sK----~al--~~lt~~lA~el~--~~gIrvN  174 (241)
T d2a4ka1         150 AGK----LGV--VGLARTLALELA--RKGVRVN  174 (241)
T ss_dssp             HCS----SHH--HHHHHHHHHHHT--TTTCEEE
T ss_pred             hhh----HHH--HHHHHHHHHHHh--HhCCEEe
Confidence            001    122  357888888887  4556654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.33  E-value=0.00077  Score=57.61  Aligned_cols=150  Identities=17%  Similarity=0.212  Sum_probs=89.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEee-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVH-------   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~-------   74 (329)
                      .+.+.|+||++.+|.++|..|+..|.       +|++.|++    ++.++....++.+......   .+++-.       
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   73 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGT-------AIALLDMN----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTV   73 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            46788999999999999999999997       89999999    6666655555553321100   011000       


Q ss_pred             cCcccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------h
Q psy9582          75 ENPITAFKDANIAILIGSFPRK--S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------N  137 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~  137 (329)
                      ....+.+..-|++|..+|....  +  ..+   +...+..|+.    ..+...+.+.+.  ..+.||+++-..      +
T Consensus        74 ~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~--~~G~II~isS~~~~~~~~~  151 (260)
T d1zema1          74 DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ--NYGRIVNTASMAGVKGPPN  151 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh--cCCCCCeeechhhccCCcc
Confidence            1112335678999998886432  2  122   3344555555    455566666664  567777776432      2


Q ss_pred             hHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         138 TNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       138 ~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ...|.++|..               -..+.+.+|..++  |..|+..
T Consensus       152 ~~~Y~asKaa---------------l~~ltk~lA~el~--~~gIrVN  181 (260)
T d1zema1         152 MAAYGTSKGA---------------IIALTETAALDLA--PYNIRVN  181 (260)
T ss_dssp             BHHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             hHHHHHHHHH---------------HHHHHHHHHHHhh--hhCCEEE
Confidence            2223333321               2346777777775  5667754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.33  E-value=5.5e-05  Score=62.79  Aligned_cols=107  Identities=15%  Similarity=0.105  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.++|.|+||+|++|++++..|++.|.-     +.++.+.++    .++..    ++.....-...++.-..+..+++++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~-----v~v~~~~R~----~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~   68 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDK-----FVAKGLVRS----AQGKE----KIGGEADVFIGDITDADSINPAFQG   68 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTT-----CEEEEEESC----HHHHH----HTTCCTTEEECCTTSHHHHHHHHTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCc-----EEEEEEcCC----HHHHH----hccCCcEEEEeeecccccccccccc
Confidence            3468999999999999999999998861     134444444    22222    1111100000111111234678999


Q ss_pred             ccEEEEeCCCCCC------C---------CCCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          84 ANIAILIGSFPRK------S---------NMERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        84 aDiVi~~~g~~~~------~---------g~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      +|.||++++....      +         ..........|....+.++.......
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG  123 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc
Confidence            9999998764320      0         01123344567777777777777664

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.32  E-value=7.3e-05  Score=63.30  Aligned_cols=154  Identities=11%  Similarity=0.077  Sum_probs=84.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc--C
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF--K   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al--~   82 (329)
                      .++|.|+||+|.+|.+++..|++.|.       +|.++|+++.+  +.......++..........+  .....+.+  .
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~-------~V~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   70 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNW-------WVASIDVVENE--EASASVIVKMTDSFTEQADQV--TAEVGKLLGDQ   70 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESSCCT--TSSEEEECCCCSCHHHHHHHH--HHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCccc--cccccceeecccCcHHHHHHH--HHHHHHHhCCC
Confidence            57999999999999999999999998       89999998311  111111110000000000000  00111122  2


Q ss_pred             CccEEEEeCCCCC--CC-CC----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHHHHHHCCC
Q psy9582          83 DANIAILIGSFPR--KS-NM----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV------NTNTYITMKSAPD  149 (329)
Q Consensus        83 ~aDiVi~~~g~~~--~~-g~----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~~~~~~~~  149 (329)
                      .-|++|..+|...  .+ ..    +....+..|+.....+++.+.++..+.+.||+++--.      +...|.++|..  
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa--  148 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGA--  148 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH--
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHH--
Confidence            4699999887421  21 11    1333456677666666666665554567777776322      12223333321  


Q ss_pred             CCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         150 LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       150 ~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                                   -..+.+.+|..++-.+..|+..
T Consensus       149 -------------l~~lt~~la~El~~~~~gI~vn  170 (236)
T d1dhra_         149 -------------VHQLCQSLAGKNSGMPSGAAAI  170 (236)
T ss_dssp             -------------HHHHHHHHTSTTSSCCTTCEEE
T ss_pred             -------------HHHHHHHHHHHhccCCCcEEEE
Confidence                         2346677777776546677755

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=7.5e-05  Score=63.93  Aligned_cols=117  Identities=15%  Similarity=0.154  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCc-c---ceE-eecCcc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLL-V---DVS-VHENPI   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~-~---~i~-~~~~~~   78 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    ++.++....++..... .+. .   .+. ......
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   74 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGA-------RVVICDKD----ESGGRALEQELPGAVFILCDVTQEDDVKTLVSETI   74 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999997       89999998    5556544444432210 000 0   000 001123


Q ss_pred             cccCCccEEEEeCCCCCCCC----CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          79 TAFKDANIAILIGSFPRKSN----ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~~g----~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +.+..-|++|..+|....++    .+   ....+..|+.    .++...+.|++.   .+.||+++-.
T Consensus        75 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~---~G~Ii~isS~  139 (250)
T d1ydea1          75 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS---QGNVINISSL  139 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEECCH
T ss_pred             HhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC---CCCCcccccc
Confidence            34567899999888543221    22   3344555544    455566677653   3567777643

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.29  E-value=0.0003  Score=60.89  Aligned_cols=117  Identities=18%  Similarity=0.193  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-------ecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-------HEN   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-------~~~   76 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|++.|++    .++++....++......+..+++-       ...
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~   72 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-------KVAVLDKS----AERLAELETDHGDNVLGIVGDVRSLEDQKQAASR   72 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHcCCCeeEEecccccHHHHHHHHHH
Confidence            567899999999999999999999998       89999999    566655444443221111001100       011


Q ss_pred             cccccCCccEEEEeCCCCCCC-------CCC----HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 PITAFKDANIAILIGSFPRKS-------NME----RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~-------g~~----~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      ..+.+...|++|..+|.....       .+.    ....+..|+.    .++.+.+.+++.  ...+|++.|
T Consensus        73 ~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S  142 (276)
T d1bdba_          73 CVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTIS  142 (276)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred             HHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeee
Confidence            233456789999988853211       111    2344455543    556666777654  344554444

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.29  E-value=9.6e-05  Score=63.97  Aligned_cols=81  Identities=19%  Similarity=0.146  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hh-HhhhhhcccCC-ccceEeecCcccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GV-IMEIEDCIFPL-LVDVSVHENPITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~-~~dl~~~~~~~-~~~i~~~~~~~~a   80 (329)
                      +++||.|+||+|++|++++..|+..|.       +|+.++++...  .... .. ...+.+..... ..++.-.....++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-------~V~~~~R~~~~--~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~   72 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-------PTYVLFRPEVV--SNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA   72 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCSCCS--SCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEECCCcc--cchhHHHHHhhhccCCcEEEEeecccchhhhhh
Confidence            467899999999999999999999986       89999887211  1111 01 11111110000 0111112234567


Q ss_pred             cCCccEEEEeCCC
Q psy9582          81 FKDANIAILIGSF   93 (329)
Q Consensus        81 l~~aDiVi~~~g~   93 (329)
                      +++++.++.+++.
T Consensus        73 ~~~~~~~~~~~~~   85 (312)
T d1qyda_          73 LKQVDVVISALAG   85 (312)
T ss_dssp             HTTCSEEEECCCC
T ss_pred             ccCcchhhhhhhh
Confidence            8999999987643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.0021  Score=54.57  Aligned_cols=117  Identities=14%  Similarity=0.065  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEeec----
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVHE----   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~~----   75 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    .++++....++.....+. .    .+++-..    
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   71 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGA-------KVALVDWN----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRD   71 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHH
Confidence            46788889999999999999999997       89999999    555555555554321000 0    0110000    


Q ss_pred             ---CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582          76 ---NPITAFKDANIAILIGSFPRKSNMERSELLAINSS----IFIEQGKALNSVAS-RDVKVLVVGN  134 (329)
Q Consensus        76 ---~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~----~~~~i~~~i~~~~~-p~a~viv~tN  134 (329)
                         ...+.+..-|++|..||....  .+..+.+..|+.    ..+..++.+.+... ..+.||+++-
T Consensus        72 ~~~~~~~~~G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS  136 (254)
T d2gdza1          72 TFRKVVDHFGRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  136 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             HHHHHHHHcCCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc
Confidence               112234578999999887543  345555665554    55555666655421 2367777763

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.0017  Score=55.27  Aligned_cols=151  Identities=17%  Similarity=0.163  Sum_probs=90.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEee------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVH------   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~------   74 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++..+.+++.......   .+++-.      
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Confidence            357888999999999999999999997       89999998    5666655555554321100   011000      


Q ss_pred             -cCcccccCCccEEEEeCCCCCC-C-CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hh
Q psy9582          75 -ENPITAFKDANIAILIGSFPRK-S-NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NT  138 (329)
Q Consensus        75 -~~~~~al~~aDiVi~~~g~~~~-~-g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~  138 (329)
                       ....+.+..-|++|..+|.... + ..+   ....+..|+.    ..+.+++.+.+.  ..+.||+++--.      +.
T Consensus        79 ~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~g~Ii~isS~~~~~~~~~~  156 (255)
T d1fmca_          79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN--GGGVILTITSMAAENKNINM  156 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTCCCTTC
T ss_pred             HHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc--cccccccccccchhcccccc
Confidence             0112335678999999886532 1 223   3334455544    556667777775  356666665322      23


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|.++|..               -..+.+.+|..++  +..|+.-
T Consensus       157 ~~Y~asKaa---------------l~~lt~~lA~el~--~~gIrVN  185 (255)
T d1fmca_         157 TSYASSKAA---------------ASHLVRNMAFDLG--EKNIRVN  185 (255)
T ss_dssp             HHHHHHHHH---------------HHHHHHHHHHHHH--TTTEEEE
T ss_pred             ccchhHHHH---------------HHHHHHHHHHHhC--ccCeEEE
Confidence            334444332               1346667777765  5567754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.25  E-value=0.00026  Score=54.04  Aligned_cols=37  Identities=11%  Similarity=0.280  Sum_probs=32.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      +|+.|+|+ |.+|+.++..|.+.|.       +++++|.+    +++++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~-------~vvvid~d----~~~~~   37 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGH-------EVLAVDIN----EEKVN   37 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-------CCEEEESC----HHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-------eEEEecCc----HHHHH
Confidence            47899999 9999999999999998       89999999    55544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.24  E-value=0.002  Score=54.69  Aligned_cols=119  Identities=13%  Similarity=0.031  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEee-------c
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVH-------E   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~-------~   75 (329)
                      .+.+.|+||++.+|.+++..|++.|.       +|++.|++    .++++....++.....  .+..+++-.       .
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGA-------KVMITGRH----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHH
Confidence            36788889999999999999999998       89999998    5556544444432110  000011000       1


Q ss_pred             CcccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          76 NPITAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ...+.+..-|++|..+|.... +  ..+   ....+..|+.    ..+..++.|.+.. ..+.||+++-.
T Consensus        75 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~-~gg~Ii~isS~  143 (251)
T d1zk4a1          75 ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSI  143 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCG
T ss_pred             HHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC-CCCceEeeecc
Confidence            112335678999998876432 2  123   3344555554    4566667777652 45677777643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.24  E-value=0.00048  Score=60.06  Aligned_cols=112  Identities=10%  Similarity=0.012  Sum_probs=68.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cCc--c----
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-ENP--I----   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~--~----   78 (329)
                      +||.|+||+|++|++++..|++.|+       +|+.+|+...  ..... ...++.     ...++++. .|+  .    
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-------~V~~~~r~~~--~~~~~-~l~~~~-----~~~~~~~~~~Dl~d~~~~~   65 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-------RVHGLVARRS--SDTRW-RLRELG-----IEGDIQYEDGDMADACSVQ   65 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCS--SCCCH-HHHHTT-----CGGGEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCCC--cccHH-HHHHhc-----ccCCcEEEEccccChHHhh
Confidence            4899999999999999999999997       9999998721  11111 111111     00122211 121  1    


Q ss_pred             cccC--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          79 TAFK--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        79 ~al~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.+.  ..+++++++......  .......+..|+.....+.+.+.++. ...+++..|
T Consensus        66 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~-~~~~~i~~S  123 (321)
T d1rpna_          66 RAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQAS  123 (321)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEE
T ss_pred             hhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhC-CCccccccc
Confidence            1111  355666665443211  23455667889999999999999884 665666654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=97.21  E-value=0.00018  Score=60.30  Aligned_cols=37  Identities=22%  Similarity=0.435  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+...||+|||| |-.|.+.|..|.+.|.       +|.|+|.+
T Consensus         2 ~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~-------~V~vier~   38 (268)
T d1c0pa1           2 MMHSQKRVVVLGS-GVIGLSSALILARKGY-------SVHILARD   38 (268)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             CCCCCCcEEEECc-cHHHHHHHHHHHHCCC-------CEEEEeCC
Confidence            6677789999999 9999999999999998       89999986

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.19  E-value=0.00023  Score=57.86  Aligned_cols=38  Identities=29%  Similarity=0.444  Sum_probs=31.1

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++++||+|+||+|.+|+-+...|.....+      ||..+--+
T Consensus         2 s~~kikVaIlGATGyvG~elirLL~~HP~~------ei~~l~S~   39 (183)
T d2cvoa1           2 SGEEVRIAVLGASGYTGAEIVRLLANHPQF------RIKVMTAD   39 (183)
T ss_dssp             CSSCEEEEEESCSSHHHHHHHHHHTTCSSE------EEEEEECS
T ss_pred             CCCccEEEEECcccHHHHHHHHHHHhCCCc------eEEEEecc
Confidence            356799999999999999999999987654      77777544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.18  E-value=0.00091  Score=57.36  Aligned_cols=118  Identities=14%  Similarity=0.092  Sum_probs=71.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC-ccceEeec-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL-LVDVSVHE-------   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~-~~~i~~~~-------   75 (329)
                      .+.+.|+||++.+|..+|..|++.|.       +|++.|++    +++++..+.++..... .+ ..+++-..       
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~   74 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGA-------KVVIADIA----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   74 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHH
Confidence            46788999999999999999999997       89999999    5666655555543210 00 00110000       


Q ss_pred             CcccccCCccEEEEeCCCCC-CC----CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          76 NPITAFKDANIAILIGSFPR-KS----NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~-~~----g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ...+.+..-|++|..+|... .+    ..+   ....+..|+.    ..+...+.|.+.  ..+.+|+++.-
T Consensus        75 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~g~ii~iss~  144 (268)
T d2bgka1          75 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA--KKGSIVFTASI  144 (268)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG--TCEEEEEECCG
T ss_pred             HHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc--CCCCccccccc
Confidence            11233557899999888532 21    122   3334455544    555666667664  45666666543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.18  E-value=0.002  Score=54.92  Aligned_cols=152  Identities=15%  Similarity=0.096  Sum_probs=88.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cC---CccceEee-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FP---LLVDVSVH-----   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~---~~~~i~~~-----   74 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|++.|+++   .+.++....++.... ..   +..+++-.     
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-------~V~~~~r~~---~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~   72 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-------DIVLNGFGD---AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEECCSC---HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCc---HHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            346788899999999999999999998       899999972   233333333332210 00   00011100     


Q ss_pred             --cCcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------
Q psy9582          75 --ENPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------  136 (329)
Q Consensus        75 --~~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------  136 (329)
                        ....+.+..-|++|..||......   .+   ....+..|+.    .++...+.+++.  ..+.||+++-..      
T Consensus        73 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~G~Iv~isS~~~~~~~~  150 (260)
T d1x1ta1          73 LVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ--GFGRIINIASAHGLVASA  150 (260)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc--CCceEeecccccceeccC
Confidence              111233467899999988654211   22   3344555544    556667777774  457777776432      


Q ss_pred             hhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         137 NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +...|.++|..               -..+.+.+|..++  +..|+..
T Consensus       151 ~~~~Y~asKaa---------------l~~lt~~lA~el~--~~gIrVN  181 (260)
T d1x1ta1         151 NKSAYVAAKHG---------------VVGFTKVTALETA--GQGITAN  181 (260)
T ss_dssp             TCHHHHHHHHH---------------HHHHHHHHHHHHT--TTTEEEE
T ss_pred             Ccchhhhhhhh---------------HHHhHHHHHHHhc--hhCcEEE
Confidence            22333333332               1346777788776  5677755

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.17  E-value=0.00021  Score=61.04  Aligned_cols=88  Identities=20%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~   83 (329)
                      |||.|+||+|++|++++..|...|+       +|+.+|++    .-       |+.+..           +..+.++  +
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~-------~Vi~~~r~----~~-------D~~d~~-----------~~~~~l~~~~   52 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV-------EVIPTDVQ----DL-------DITNVL-----------AVNKFFNEKK   52 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE-------EEEEECTT----TC-------CTTCHH-----------HHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEeech----hc-------cCCCHH-----------HHHHHHHHcC
Confidence            7899999999999999999999887       99999987    21       222110           0122332  5


Q ss_pred             ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582          84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSV  122 (329)
Q Consensus        84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~  122 (329)
                      .|+||++++.....  ..........|......+.......
T Consensus        53 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~   93 (281)
T d1vl0a_          53 PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV   93 (281)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCEEEeeccccccccccccchhhcccccccccccccccccc
Confidence            68999987654311  1123344556666666666666654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.16  E-value=0.0022  Score=55.37  Aligned_cols=150  Identities=13%  Similarity=0.053  Sum_probs=83.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--e---------
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--H---------   74 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--~---------   74 (329)
                      +.+.|+||+|.+|.++|..|++.|.       +|++.|++    .++++..+.++..........+..  +         
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga-------~Vii~~r~----~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~   94 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGA-------QCVIASRK----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV   94 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECC----HHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHh
Confidence            6788999999999999999999997       89999999    555655555554321000000000  0         


Q ss_pred             cCcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCchh------h
Q psy9582          75 ENPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNPVN------T  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP~~------~  138 (329)
                      ....+.....|++|..+|......   .+   ....+..|...    .+..+..+... .....+++.+....      .
T Consensus        95 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~i~~~ss~~~~~~~~~~  173 (294)
T d1w6ua_          95 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA-QKGAAFLSITTIYAETGSGFV  173 (294)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECCTHHHHCCTTC
T ss_pred             hhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccc-cccccccccccchhhhccccc
Confidence            011233567899999887643221   12   22233333332    33344444443 24555666554332      1


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|.++|..               -..+.+.+|..++  +..|+.-
T Consensus       174 ~~YsasKaa---------------l~~ltk~lA~ela--~~gIrVN  202 (294)
T d1w6ua_         174 VPSASAKAG---------------VEAMSKSLAAEWG--KYGMRFN  202 (294)
T ss_dssp             HHHHHHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             chHHHHHHH---------------HHHHHHHHHHHHh--HhCeEEE
Confidence            222222221               1346677777776  5567754

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.16  E-value=0.00014  Score=62.47  Aligned_cols=35  Identities=26%  Similarity=0.212  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++||.|+||+|++|++++..|++.|.       +|+.++++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~-------~V~~l~R~   36 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGH-------PTFLLVRE   36 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEECC
Confidence            457999999999999999999999987       89999987

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00034  Score=50.10  Aligned_cols=72  Identities=8%  Similarity=0.100  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|+|. |..|.++|..|.+.|.       ++.++|.+..  .+..    .++.+.     ..+.......+.+.+.
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~-------~v~~~D~~~~--~~~~----~~~~~~-----~~~~~~~~~~~~~~~~   65 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGV-------TPRVMDTRMT--PPGL----DKLPEA-----VERHTGSLNDEWLMAA   65 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTC-------CCEEEESSSS--CTTG----GGSCTT-----SCEEESBCCHHHHHHC
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCC-------EEEEeeCCcC--chhH----HHHhhc-----cceeecccchhhhccC
Confidence            468999999 9999999999999987       8999999721  1111    112211     1222222234567899


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||++-|.|.
T Consensus        66 d~vi~SPGi~~   76 (93)
T d2jfga1          66 DLIVASPGIAL   76 (93)
T ss_dssp             SEEEECTTSCT
T ss_pred             CEEEECCCCCC
Confidence            99999988765

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00086  Score=59.05  Aligned_cols=172  Identities=8%  Similarity=-0.024  Sum_probs=87.2

Q ss_pred             CEE-EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhhcccCCccceEee-cCc-----
Q psy9582           6 VRI-SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIEDCIFPLLVDVSVH-ENP-----   77 (329)
Q Consensus         6 ~kI-~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~-----   77 (329)
                      +|| .|+||+|++|++++..|++.|+       +|+.+|+.... +..+++....+..   .....+++.. .|.     
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-------~V~~i~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~   70 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-------EVHGIVRRSSSFNTGRIEHLYKNPQ---AHIEGNMKLHYGDLTDSTC   70 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCTTTGGGC------------CEEEEECCTTCHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-------EEEEEECCCcccchhhHHHHhhchh---hhccCCcEEEEeecCCchh
Confidence            489 6999999999999999999998       99999996211 0111221111110   0111223221 121     


Q ss_pred             -ccccC--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCC-eEEEEEcCchhhHH---H-HHHHHC
Q psy9582          78 -ITAFK--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRD-VKVLVVGNPVNTNT---Y-ITMKSA  147 (329)
Q Consensus        78 -~~al~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~-a~viv~tNP~~~~~---~-~~~~~~  147 (329)
                       ..++.  +.++|++.++.....  .....+....|+.....+.+.+++....+ ..+|.+|-.. +-.   . -+.+.+
T Consensus        71 ~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          71 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQEIPQKETT  149 (347)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCSSSSBCTTS
T ss_pred             hHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-eecCCCCCCCCCCC
Confidence             22332  445777766543211  12344556789889999999888864333 3555554211 000   0 000111


Q ss_pred             CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEec
Q psy9582         148 PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGN  189 (329)
Q Consensus       148 ~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~  189 (329)
                       .+.|...-|.+-+...++....++..+++...++...+.|.
T Consensus       150 -~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         150 -PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP  190 (347)
T ss_dssp             -CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCC
Confidence             12233233444444444545555666765444444334564

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.14  E-value=0.0021  Score=54.86  Aligned_cols=115  Identities=15%  Similarity=0.106  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-eec--------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-VHE--------   75 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~--------   75 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++..+.++....... .++. +..        
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~l~~~~~~~-~~~~~~~~Dvt~~~~v   72 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFAREGA-------KVTITGRH----AERLEETRQQILAAGVSE-QNVNSVVADVTTDAGQ   72 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCG-GGEEEEECCTTSHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCc-CceEEEEccCCCHHHH
Confidence            35667889999999999999999997       89999999    666666665665432110 0111 011        


Q ss_pred             -----CcccccCCccEEEEeCCCCC-----CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 -----NPITAFKDANIAILIGSFPR-----KS--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 -----~~~~al~~aDiVi~~~g~~~-----~~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                           ...+.+..-|++|..+|...     ++  ..+   +...+..|+.    ..+...+.+++.  ..++|++.|
T Consensus        73 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S  147 (264)
T d1spxa_          73 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISS  147 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred             HHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeee
Confidence                 11223457899999888532     11  122   3334555555    556666777653  355555554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.13  E-value=0.00095  Score=58.40  Aligned_cols=123  Identities=11%  Similarity=0.143  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-----cccchhhhHhhhhhcccCCccceEeec---
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-----SQKAIKGVIMEIEDCIFPLLVDVSVHE---   75 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-----~~~~~~~~~~dl~~~~~~~~~~i~~~~---   75 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       .|++.|++.+.     ..+.++....++.........++.-..   
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-------~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-------LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGE   78 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHH
Confidence            456788889999999999999999998       89999987311     111222222233221100000000001   


Q ss_pred             ----CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          76 ----NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        76 ----~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                          ...+.+..-|++|..||.....   ..+   ....+..|+.    .++...+.|++.  ..+.||+++-.
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~IV~isS~  150 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ--NYGRIIMTASA  150 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEEEECCH
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC--CCcEEEEeCCh
Confidence                1123456789999998875421   122   3344555555    556666777765  46788888743

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.12  E-value=0.00075  Score=57.27  Aligned_cols=151  Identities=18%  Similarity=0.152  Sum_probs=84.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------Cc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------NP   77 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~~   77 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|+++   .+.++....+.......+..+++-..       ..
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga-------~V~~~~~~~---~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~   74 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGA-------DIAIADLVP---APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQV   74 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC---CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCc---hHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            46788999999999999999999998       899999982   12222111111110000000111001       11


Q ss_pred             ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHH
Q psy9582          78 ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTY  141 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~  141 (329)
                      .+.+..-|++|..+|.... +  ..+   ....+..|+.    ..+.+.+.+++.  ..+.||+++--.      +...|
T Consensus        75 ~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~Iv~isS~~~~~~~~~~~~Y  152 (247)
T d2ew8a1          75 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN--GWGRIINLTSTTYWLKIEAYTHY  152 (247)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGGSCCSSCHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc--CCCCccccccchhcccCcccccc
Confidence            2335678999998886432 1  122   3344555544    555666777765  457777776322      22333


Q ss_pred             HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         142 ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       142 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .++|..             +  ..+.+.+|..++  +..|+.-
T Consensus       153 ~asKaa-------------l--~~ltk~lA~ela--~~gIrVN  178 (247)
T d2ew8a1         153 ISTKAA-------------N--IGFTRALASDLG--KDGITVN  178 (247)
T ss_dssp             HHHHHH-------------H--HHHHHHHHHHHG--GGTEEEE
T ss_pred             hhhhcc-------------H--HHHHHHHHHHhc--ccCeEEE
Confidence            333322             1  346667777764  5567654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.00084  Score=57.56  Aligned_cols=104  Identities=15%  Similarity=0.152  Sum_probs=63.2

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCc--cceEeecCcccccCCc
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLL--VDVSVHENPITAFKDA   84 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~--~~i~~~~~~~~al~~a   84 (329)
                      |.|+||+|++|++++..|++.|..      +|+.+|.-..  ..+..    .+.+... ...  ....-.......+.+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~------~V~~~d~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKD--GTKFV----NLVDLNIADYMDKEDFLIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCC------CEEEEECCSS--GGGGH----HHHTSCCSEEEEHHHHHHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCC------eEEEEECCCC--cchhh----cccccchhhhccchHHHHHHhhhhcccch
Confidence            789999999999999999998853      7999985410  11111    1111100 000  0000000112456788


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA  123 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~  123 (329)
                      ++|++.|+...............|......+.+......
T Consensus        70 ~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  108 (307)
T d1eq2a_          70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE  108 (307)
T ss_dssp             CEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             hhhhhhccccccccccccccccccccccccccccccccc
Confidence            999998876655555566666777788888877777764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.12  E-value=0.00029  Score=60.44  Aligned_cols=152  Identities=17%  Similarity=0.137  Sum_probs=86.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEee-------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVH-------   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~-------   74 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++.   ++.++....+++......   ..+++-.       
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~-------~Vv~~~r~~---~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~   76 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKA-------KVVVNYRSK---EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            46788889999999999999999998       899999972   233444444443321100   0011000       


Q ss_pred             cCcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCchh------h
Q psy9582          75 ENPITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPVN------T  138 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~~------~  138 (329)
                      ....+.+..-|++|..+|.....   ..+   ....+..|+.    ..+..++.+.+.. ....|++++-...      .
T Consensus        77 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~~Iv~isS~~~~~~~~~~  155 (261)
T d1geea_          77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND-IKGTVINMSSVHEKIPWPLF  155 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc-ccccccccccchhcccCccc
Confidence            11122345789999998865421   123   3344555544    5666677777653 4556666653321      2


Q ss_pred             HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      ..|.++|..               -..+.+.+|..++  +..|+..
T Consensus       156 ~~Y~asKaa---------------l~~lt~~lA~e~~--~~gIrVN  184 (261)
T d1geea_         156 VHYAASKGG---------------MKLMTETLALEYA--PKGIRVN  184 (261)
T ss_dssp             HHHHHHHHH---------------HHHHHHHHHHHHG--GGTCEEE
T ss_pred             cccccCCcc---------------chhhHHHHHHHhh--hhCcEEE
Confidence            333333322               1346667777765  4566654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.10  E-value=0.0022  Score=54.61  Aligned_cols=118  Identities=13%  Similarity=0.041  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccC---CccceEee------
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFP---LLVDVSVH------   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~---~~~~i~~~------   74 (329)
                      .+.+.|+||++.+|.++|..|++.|.       +|++.|++    .+.+.....++... ...   +..+++-.      
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   77 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGA-------NVAVIYRS----AADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   77 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESS----CTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence            46788999999999999999999998       89999999    44444333333221 100   00011000      


Q ss_pred             -cCcccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          75 -ENPITAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 -~~~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                       ....+.+..-|++|..+|.... +  ..+   ....+..|+.    ..+.+++.+.+.. ..+.+++.+.
T Consensus        78 ~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~~g~i~~~~s  147 (260)
T d1h5qa_          78 IQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ-QKGSIVVTSS  147 (260)
T ss_dssp             HHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECC
T ss_pred             HHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccc-cceEEEEeec
Confidence             1112345678999998886432 2  122   3344555554    5566667776553 5666666543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.09  E-value=0.0026  Score=54.17  Aligned_cols=151  Identities=17%  Similarity=0.191  Sum_probs=88.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeec-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHE-----   75 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~-----   75 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++....++.......   ..+++-..     
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   75 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-------SVYTCSRN----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQEL   75 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHH
Confidence            356889999999999999999999997       89999998    666665555554321100   00110000     


Q ss_pred             --CcccccC-CccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------
Q psy9582          76 --NPITAFK-DANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------  136 (329)
Q Consensus        76 --~~~~al~-~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------  136 (329)
                        ...+.+. .-|++|..+|......   .+   ....+..|+.    ..+...+.+.+.  ..+.||+++--.      
T Consensus        76 ~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~Ii~isS~~~~~~~~  153 (259)
T d2ae2a_          76 MNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS--ERGNVVFISSVSGALAVP  153 (259)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--SSEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh--cccccccccccccccccc
Confidence              0112234 4799999988654221   22   3345556654    445555666664  467777776322      


Q ss_pred             hhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         137 NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +...|.++|..             +  ..+.+.+|..++  +..|+.-
T Consensus       154 ~~~~Y~asKaa-------------l--~~lt~~lA~el~--~~gIrVN  184 (259)
T d2ae2a_         154 YEAVYGATKGA-------------M--DQLTRCLAFEWA--KDNIRVN  184 (259)
T ss_dssp             TCHHHHHHHHH-------------H--HHHHHHHHHHTG--GGTEEEE
T ss_pred             cccchHHHHHH-------------H--HHHHHHHHHHhC--cCceEEE
Confidence            22333333321             1  346677777765  5567654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.09  E-value=0.00058  Score=58.42  Aligned_cols=117  Identities=15%  Similarity=0.133  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeec-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHE-----   75 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~-----   75 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|++.|++    +++++....++.......   ..+++-..     
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-------~V~~~~r~----~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-------VIHTCARN----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Confidence            357899999999999999999999997       89999999    566665555554321110   00110000     


Q ss_pred             --CcccccC-CccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          76 --NPITAFK-DANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        76 --~~~~al~-~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        ...+.+. .-|++|..+|.... +  ..+   ....+..|+.    .++...+.|++.  ..+.||+++
T Consensus        76 ~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~G~Iv~is  144 (259)
T d1xq1a_          76 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS--GCGNIIFMS  144 (259)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SSCEEEEEC
T ss_pred             HHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc--ccccccccc
Confidence              1112233 37999999886432 1  222   3344555555    455556666664  356677765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.08  E-value=0.00095  Score=52.37  Aligned_cols=88  Identities=13%  Similarity=0.143  Sum_probs=54.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI   86 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi   86 (329)
                      ||++||. |.||+++|..|++.+.       .+ .+++.    .++..    ++.... ..      .....+.+.++|+
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~-------~~-~~~~~----~~~~~----~~~~~~-~~------~~~~~~~~~~~~~   57 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFP-------TL-VWNRT----FEKAL----RHQEEF-GS------EAVPLERVAEARV   57 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSC-------EE-EECSS----THHHH----HHHHHH-CC------EECCGGGGGGCSE
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCC-------EE-EEeCC----HHHHH----HHHHHc-CC------cccccccccceeE
Confidence            7999999 9999999999998775       44 56665    22222    222111 00      1223567778999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +|++.-               +.+.+......+.....++.+++..|
T Consensus        58 ~i~~~~---------------~~~~v~~~~~~l~~~~~~~~~iid~s   89 (156)
T d2cvza2          58 IFTCLP---------------TTREVYEVAEALYPYLREGTYWVDAT   89 (156)
T ss_dssp             EEECCS---------------SHHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred             EEeccc---------------chhhhhhhhccccccccccccccccc
Confidence            888621               11344455566666665666666555

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=97.05  E-value=0.0008  Score=54.99  Aligned_cols=92  Identities=9%  Similarity=0.118  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|||. |.+|+.++..+..-|.       +|..||..    .......  ..         .+....++.+.++.|
T Consensus        49 gktvgIiG~-G~IG~~va~~l~~fg~-------~v~~~d~~----~~~~~~~--~~---------~~~~~~~l~~ll~~s  105 (193)
T d1mx3a1          49 GETLGIIGL-GRVGQAVALRAKAFGF-------NVLFYDPY----LSDGVER--AL---------GLQRVSTLQDLLFHS  105 (193)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECTT----SCTTHHH--HH---------TCEECSSHHHHHHHC
T ss_pred             CceEEEecc-ccccccceeeeecccc-------ceeeccCc----ccccchh--hh---------ccccccchhhccccC
Confidence            469999999 9999999999988777       89999987    2211100  11         122335677889999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      |+|++.... +...++       -|       .+.+... ++++++||++-
T Consensus       106 D~i~~~~plt~~T~~l-------i~-------~~~l~~m-k~~a~lIN~sR  141 (193)
T d1mx3a1         106 DCVTLHCGLNEHNHHL-------IN-------DFTVKQM-RQGAFLVNTAR  141 (193)
T ss_dssp             SEEEECCCCCTTCTTS-------BS-------HHHHTTS-CTTEEEEECSC
T ss_pred             CEEEEeecccccchhh-------hh-------HHHHhcc-CCCCeEEecCC
Confidence            999996432 222221       01       1233443 58999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.0011  Score=52.94  Aligned_cols=71  Identities=10%  Similarity=0.091  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.++|.|+|| |..+.++++.|...+.       +|++++++    .++++..+..+.+..     .+............
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~-------~i~I~nRt----~~ka~~l~~~~~~~~-----~~~~~~~~~~~~~~   79 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDC-------AVTITNRT----VSRAEELAKLFAHTG-----SIQALSMDELEGHE   79 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----HHHHHHHHHHTGGGS-----SEEECCSGGGTTCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccce-------EEEeccch----HHHHHHHHHHHhhcc-----cccccccccccccc
Confidence            3579999999 9999999999999886       89999998    566654444443221     23333322334568


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      +|+||.+.
T Consensus        80 ~dliIN~T   87 (170)
T d1nyta1          80 FDLIINAT   87 (170)
T ss_dssp             CSEEEECC
T ss_pred             cceeeccc
Confidence            99999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.0036  Score=54.41  Aligned_cols=117  Identities=15%  Similarity=0.109  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceE-eecC-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVS-VHEN-----   76 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~-~~~~-----   76 (329)
                      +.+.+.|+||++.+|.++|..|+..|.       +|++.|++    .++++..+.++...... ...++. +..|     
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga-------~Vvi~~r~----~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~   79 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS-------NVVIASRK----LERLKSAADELQANLPPTKQARVIPIQCNIRNEE   79 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhhhccccCceEEEEeccCCCHH
Confidence            346889999999999999999999998       89999999    66666555555432100 001111 1111     


Q ss_pred             --------cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          77 --------PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        77 --------~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                              ..+.+..-|++|..+|......   .+   ....+..|+.    .++..++.+.+.  ..+.||+++
T Consensus        80 ~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~g~Ii~~s  152 (297)
T d1yxma1          80 EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE--HGGSIVNII  152 (297)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH--HCEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc--ccccccccc
Confidence                    1123557899999887643211   22   3344555644    455566666665  345566655

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.02  E-value=0.0004  Score=55.23  Aligned_cols=78  Identities=17%  Similarity=0.144  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ++-||.|+|| |.+|..-+......|-       +|..+|.+    .++++.....+...   ......-...+.+.+++
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA-------~V~~~D~~----~~~l~~l~~~~~~~---~~~~~~~~~~l~~~~~~   95 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGA-------QVQIFDIN----VERLSYLETLFGSR---VELLYSNSAEIETAVAE   95 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHGGG---SEEEECCHHHHHHHHHT
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCC-------EEEEEeCc----HHHHHHHHHhhccc---ceeehhhhhhHHHhhcc
Confidence            4679999999 9999998888887776       89999999    66665332222111   00011111235778999


Q ss_pred             ccEEEEeCCCCCC
Q psy9582          84 ANIAILIGSFPRK   96 (329)
Q Consensus        84 aDiVi~~~g~~~~   96 (329)
                      ||+||-++-.|-+
T Consensus        96 aDivI~aalipG~  108 (168)
T d1pjca1          96 ADLLIGAVLVPGR  108 (168)
T ss_dssp             CSEEEECCCCTTS
T ss_pred             CcEEEEeeecCCc
Confidence            9999998876643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.98  E-value=0.0016  Score=52.58  Aligned_cols=88  Identities=17%  Similarity=0.251  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.+|..++..+..-|.       +|..+|+.    ..  ++          +    .....++.+.+++|
T Consensus        42 gk~vgIiG~-G~IG~~va~~l~~~g~-------~v~~~d~~----~~--~~----------~----~~~~~~l~ell~~s   93 (181)
T d1qp8a1          42 GEKVAVLGL-GEIGTRVGKILAALGA-------QVRGFSRT----PK--EG----------P----WRFTNSLEEALREA   93 (181)
T ss_dssp             TCEEEEESC-STHHHHHHHHHHHTTC-------EEEEECSS----CC--CS----------S----SCCBSCSHHHHTTC
T ss_pred             CceEEEecc-ccccccceeeeecccc-------cccccccc----cc--cc----------c----eeeeechhhhhhcc
Confidence            478999999 9999999999998887       89999987    21  10          0    00123568899999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|++.... +...+.     +  |       .+.++.. ++++++|+++-.
T Consensus        94 Div~~~~pl~~~t~~l-----i--~-------~~~l~~m-k~~ailIN~~RG  130 (181)
T d1qp8a1          94 RAAVCALPLNKHTRGL-----V--K-------YQHLALM-AEDAVFVNVGRA  130 (181)
T ss_dssp             SEEEECCCCSTTTTTC-----B--C-------HHHHTTS-CTTCEEEECSCG
T ss_pred             chhhcccccccccccc-----c--c-------cceeeec-cccceEEecccc
Confidence            999996422 221111     0  1       1444554 589999999843

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.97  E-value=0.0024  Score=53.77  Aligned_cols=155  Identities=12%  Similarity=0.098  Sum_probs=88.0

Q ss_pred             E-EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEe-------ec
Q psy9582           7 R-ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSV-------HE   75 (329)
Q Consensus         7 k-I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~-------~~   75 (329)
                      + |.|+||++.+|.++|..|++.|.--......|.++|++    .+.++....++.......   ..+++-       ..
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~----~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~   77 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT----AADLEKISLECRAEGALTDTITADISDMADVRRLTT   77 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            5 46889999999999999999876200000148999998    666665555555322100   001100       01


Q ss_pred             CcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCchh------hH
Q psy9582          76 NPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPVN------TN  139 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~~------~~  139 (329)
                      ...+.+..-|++|..+|......   .+   ....+..|+.    .++.+.+.|++.  ..+.||+++.-..      ..
T Consensus        78 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~G~Ii~isS~~~~~~~~~~~  155 (240)
T d2bd0a1          78 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ--HSGHIFFITSVAATKAFRHSS  155 (240)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc--CCCceEEEechhhcCCCCCCh
Confidence            12334567899999888653211   22   3344555554    566677777774  4677777764332      22


Q ss_pred             HHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         140 TYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       140 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .|.++|..               -..|.+.+|..++  +..|+..
T Consensus       156 ~Y~asK~a---------------l~~lt~~la~el~--~~gIrvn  183 (240)
T d2bd0a1         156 IYCMSKFG---------------QRGLVETMRLYAR--KCNVRIT  183 (240)
T ss_dssp             HHHHHHHH---------------HHHHHHHHHHHHT--TTTEEEE
T ss_pred             HHHHHHHH---------------HHHHHHHHHHHhC--cCCeEEE
Confidence            33333321               1345666677765  5567754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.96  E-value=0.0026  Score=45.62  Aligned_cols=75  Identities=11%  Similarity=0.168  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEEcCCCchH-HHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582           1 MLKKPVRISITGAAGQIG-YNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT   79 (329)
Q Consensus         1 ~~~~~~kI~IiGa~G~vG-~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
                      ||.+.+||-+||- |.+| +++|..|.+.|+       +|.-.|..+    .   .....+.+..    ..+.... ..+
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~-------~VsGSD~~~----~---~~~~~L~~~G----i~v~~g~-~~~   63 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGY-------QISGSDIAD----G---VVTQRLAQAG----AKIYIGH-AEE   63 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTC-------EEEEEESCC----S---HHHHHHHHTT----CEEEESC-CGG
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCC-------EEEEEeCCC----C---hhhhHHHHCC----CeEEECC-ccc
Confidence            5788899999999 8888 567999999998       999999972    1   1223343322    1233322 356


Q ss_pred             ccCCccEEEEeCCCCC
Q psy9582          80 AFKDANIAILIGSFPR   95 (329)
Q Consensus        80 al~~aDiVi~~~g~~~   95 (329)
                      .++++|+||.+.+.|.
T Consensus        64 ~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1          64 HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             GGTTCSEEEECTTSCT
T ss_pred             cCCCCCEEEECCCcCC
Confidence            6899999999887765

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.95  E-value=0.0017  Score=55.01  Aligned_cols=150  Identities=16%  Similarity=0.168  Sum_probs=86.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-c---ceE-eecCcc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-V---DVS-VHENPI   78 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~---~i~-~~~~~~   78 (329)
                      +.+.+.|+||++.+|.++|..|++.|.       +|.+.|++    ++..+ ....+.....++. .   .+. ......
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-------~V~~~~~~----~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   71 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-------LVALCDLR----PEGKE-VAEAIGGAFFQVDLEDERERVRFVEEAA   71 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS----TTHHH-HHHHHTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHH-HHHHcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            346889999999999999999999997       89999998    33322 2212211111110 0   000 011223


Q ss_pred             cccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCch------hhHHHH
Q psy9582          79 TAFKDANIAILIGSFPRK-S--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPV------NTNTYI  142 (329)
Q Consensus        79 ~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~------~~~~~~  142 (329)
                      +.+..-|++|..||.... +  ..+   ....+..|+.    ..+...+.|++.  ..+.||+++-..      +...|.
T Consensus        72 ~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~Ii~isS~~~~~~~~~~~~Y~  149 (248)
T d2d1ya1          72 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV--GGGAIVNVASVQGLFAEQENAAYN  149 (248)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT--TCEEEEEECCGGGTSBCTTBHHHH
T ss_pred             HhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc--ccccccccccccccccccccchhH
Confidence            446688999998886432 1  122   3334555554    555666667663  467888876433      223333


Q ss_pred             HHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         143 TMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       143 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +.|..               -..+.+.+|..++  +..|+..
T Consensus       150 asKaa---------------l~~ltk~lA~el~--~~gIrVN  174 (248)
T d2d1ya1         150 ASKGG---------------LVNLTRSLALDLA--PLRIRVN  174 (248)
T ss_dssp             HHHHH---------------HHHHHHHHHHHHG--GGTEEEE
T ss_pred             HHHHH---------------HHHHHHHHHHHhh--hhCcEEE
Confidence            33322               1346667777776  5567754

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.94  E-value=0.0012  Score=52.85  Aligned_cols=72  Identities=11%  Similarity=0.124  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.++|.|+|+ |.++.++++.|.+++.       +|++++++    .++++..+..+....     ++.........+.+
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~-------~i~I~nR~----~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~   79 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQ-------NIVLANRT----FSKTKELAERFQPYG-----NIQAVSMDSIPLQT   79 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTC-------EEEEEESS----HHHHHHHHHHHGGGS-----CEEEEEGGGCCCSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCc-------eeeeccch----HHHHHHHHHHHhhcc-----ccchhhhccccccc
Confidence            3579999998 9999999999987553       89999999    666666655554321     23222222346789


Q ss_pred             ccEEEEeCC
Q psy9582          84 ANIAILIGS   92 (329)
Q Consensus        84 aDiVi~~~g   92 (329)
                      +|+||.+..
T Consensus        80 ~diiIN~tp   88 (171)
T d1p77a1          80 YDLVINATS   88 (171)
T ss_dssp             CSEEEECCC
T ss_pred             cceeeeccc
Confidence            999999843

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=96.93  E-value=0.00011  Score=57.58  Aligned_cols=62  Identities=10%  Similarity=0.044  Sum_probs=37.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEE
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIA   87 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiV   87 (329)
                      |++||+ |+||++++..|..++.       .+.+++++    .++++..+.....         . ..+..++++.+|+|
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~-------~~~v~~R~----~~~~~~l~~~~~~---------~-~~~~~~~~~~~DiV   59 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYE-------IGYILSRS----IDRARNLAEVYGG---------K-AATLEKHPELNGVV   59 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC-----------CCCEECSS----HHHHHHHHHHTCC---------C-CCSSCCCCC---CE
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCC-------EEEEEeCC----hhhhcchhhcccc---------c-ccchhhhhccCcEE
Confidence            689998 9999999987755443       34578888    5555533222110         1 12356789999999


Q ss_pred             EEeC
Q psy9582          88 ILIG   91 (329)
Q Consensus        88 i~~~   91 (329)
                      |++.
T Consensus        60 il~v   63 (153)
T d2i76a2          60 FVIV   63 (153)
T ss_dssp             EECS
T ss_pred             EEec
Confidence            9983

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.93  E-value=0.0074  Score=51.17  Aligned_cols=151  Identities=15%  Similarity=0.145  Sum_probs=86.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeec-----
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHE-----   75 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~-----   75 (329)
                      +.+++.|+||++.+|.++|..|++.|.       +|++.|++    +++++.....+......+.   .+++-..     
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-------~V~i~~r~----~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~   73 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-------RVYTCSRN----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKL   73 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHH
Confidence            457899999999999999999999998       89999999    5556554444443221110   0110001     


Q ss_pred             --CcccccC-CccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCchh-----
Q psy9582          76 --NPITAFK-DANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPVN-----  137 (329)
Q Consensus        76 --~~~~al~-~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~~-----  137 (329)
                        ...+.+. .-|++|..+|.....   ..+   +...+..|+.    .++.+.+.+.+.  +.+.+|+++-...     
T Consensus        74 ~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--~~g~ii~isS~~~~~~~~  151 (258)
T d1ae1a_          74 MQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS--QNGNVIFLSSIAGFSALP  151 (258)
T ss_dssp             HHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc--cccccccccccccccccc
Confidence              1112232 368888888765421   122   3333444443    455566667664  4667777764332     


Q ss_pred             -hHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         138 -TNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       138 -~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                       ...|.+.|.             .  -..+.+.+|..++  |..|+.-
T Consensus       152 ~~~~Y~~sK~-------------a--l~~lt~~lA~el~--~~gIrvN  182 (258)
T d1ae1a_         152 SVSLYSASKG-------------A--INQMTKSLACEWA--KDNIRVN  182 (258)
T ss_dssp             TCHHHHHHHH-------------H--HHHHHHHHHHHHG--GGTEEEE
T ss_pred             cchhHHHHHH-------------H--HHHHHHHHHHhcC--cCcEEEE
Confidence             222222222             1  2346677788776  5566654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.92  E-value=0.0041  Score=52.68  Aligned_cols=150  Identities=13%  Similarity=0.173  Sum_probs=88.9

Q ss_pred             EE-EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEee-------c
Q psy9582           7 RI-SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVH-------E   75 (329)
Q Consensus         7 kI-~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~-------~   75 (329)
                      || .|+||++.+|.++|..|++.|.       +|.+.|++    +++++....++.+.....   ..+++-.       .
T Consensus         3 KValITGas~GIG~aia~~la~~Ga-------~V~i~~r~----~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~   71 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGL-------RVFVCARG----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA   71 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence            45 6889999999999999999998       89999999    666666555665432110   0011000       1


Q ss_pred             CcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh----cCCCeEEEEEcCch------hhH
Q psy9582          76 NPITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSV----ASRDVKVLVVGNPV------NTN  139 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~----~~p~a~viv~tNP~------~~~  139 (329)
                      ...+.+..-|++|..||......   .+   ....+..|+.....+++.+-++    .+..+.||+++--.      +..
T Consensus        72 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~  151 (257)
T d2rhca1          72 AVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAA  151 (257)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccch
Confidence            11233567899999988754211   22   4455667777666666554332    11345666665322      233


Q ss_pred             HHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         140 TYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       140 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      .|.++|..               -..+.+.+|..++  +..|+.-
T Consensus       152 ~Y~asKaa---------------l~~ltk~lA~el~--~~gIrVN  179 (257)
T d2rhca1         152 PYSASKHG---------------VVGFTKALGLELA--RTGITVN  179 (257)
T ss_dssp             HHHHHHHH---------------HHHHHHHHHHHTT--TSEEEEE
T ss_pred             hHHHHHHH---------------HHHHHHHHHHHhh--hhCcEEE
Confidence            34444432               1346777887775  5567754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.90  E-value=0.0038  Score=53.34  Aligned_cols=120  Identities=14%  Similarity=0.153  Sum_probs=73.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEe-------e
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSV-------H   74 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~-------~   74 (329)
                      .+++.|+||++.+|.+++..|+..|.       +|++.|++.   ++.++..+..+........   .++.-       .
T Consensus        18 gK~~lITGas~GIG~aia~~la~~Ga-------~Vvi~~~~~---~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~   87 (272)
T d1g0oa_          18 GKVALVTGAGRGIGREMAMELGRRGC-------KVIVNYANS---TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF   87 (272)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCc---hHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHH
Confidence            47899999999999999999999998       899999882   3334433333332211000   00000       0


Q ss_pred             cCcccccCCccEEEEeCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          75 ENPITAFKDANIAILIGSFPRKS---NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        75 ~~~~~al~~aDiVi~~~g~~~~~---g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      ....+.+..-|++|..+|.....   ..   +....+..|+.-...+.+.+.++....+.+++++.
T Consensus        88 ~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          88 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             HHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            11233456779999988764322   12   24455666777666666666666555666666654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.88  E-value=0.00062  Score=52.95  Aligned_cols=71  Identities=20%  Similarity=0.331  Sum_probs=45.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ++||+|+||+|.+|.-+...|.+.++-.    .+|.++-.+.    .  .|.....      ...++.......+.+.++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~----~~l~~~~s~~----~--~Gk~i~~------~~~~~~~~~~~~~~~~~~   65 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPL----HRLHLLASAE----S--AGQRMGF------AESSLRVGDVDSFDFSSV   65 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCC----SCEEEEECTT----T--TTCEEEE------TTEEEECEEGGGCCGGGC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCc----eEEEEEeecc----c--CCcceee------ccccchhccchhhhhccc
Confidence            5899999999999999999887643210    2788886651    1  1211111      112333333345678899


Q ss_pred             cEEEEeC
Q psy9582          85 NIAILIG   91 (329)
Q Consensus        85 DiVi~~~   91 (329)
                      |+++++.
T Consensus        66 d~vf~a~   72 (144)
T d2hjsa1          66 GLAFFAA   72 (144)
T ss_dssp             SEEEECS
T ss_pred             eEEEecC
Confidence            9999874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.87  E-value=0.0016  Score=53.02  Aligned_cols=94  Identities=14%  Similarity=0.175  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.+|+.++..+..-|.       ++..+|..    .......   ...       ......++.+.++.|
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~-------~v~~~d~~----~~~~~~~---~~~-------~~~~~~~l~~ll~~s  104 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDM-------DIDYFDTH----RASSSDE---ASY-------QATFHDSLDSLLSVS  104 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSS----CCCHHHH---HHH-------TCEECSSHHHHHHHC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhcc-------cccccccc----ccccchh---hcc-------cccccCCHHHHHhhC
Confidence            479999999 9999999998887776       89999987    2211111   111       112234567899999


Q ss_pred             cEEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGS-FPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g-~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|++... .+...++=       |       .+.+... ++++++||++--
T Consensus       105 D~v~l~~plt~~T~~li-------~-------~~~l~~m-k~~a~lIN~sRG  141 (191)
T d1gdha1         105 QFFSLNAPSTPETRYFF-------N-------KATIKSL-PQGAIVVNTARG  141 (191)
T ss_dssp             SEEEECCCCCTTTTTCB-------S-------HHHHTTS-CTTEEEEECSCG
T ss_pred             CeEEecCCCCchHhhee-------c-------HHHhhCc-CCccEEEecCCc
Confidence            99998643 23222210       1       1233443 689999999854

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.0028  Score=54.11  Aligned_cols=116  Identities=12%  Similarity=0.129  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee---------
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH---------   74 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~---------   74 (329)
                      +.+++.|+||++++|.++|..|++.|.       +|.+.|++    +++++....++..........+...         
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-------~Vil~~r~----~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   81 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-------HVVVTARS----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQ   81 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESC----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHH
Confidence            347899999999999999999999997       89999999    6667655544432210100000000         


Q ss_pred             --cCcccccCCccEEEEeCCCCCC-C--CCCHH---HHHHHHH----HHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          75 --ENPITAFKDANIAILIGSFPRK-S--NMERS---ELLAINS----SIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        75 --~~~~~al~~aDiVi~~~g~~~~-~--g~~~~---~~~~~n~----~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                        ....+.....|+++..+|.... +  ..+..   ..+..|+    ..++.+.+.+++-   ++.+++++
T Consensus        82 ~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~---~G~ii~is  149 (269)
T d1xu9a_          82 FVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---NGSIVVVS  149 (269)
T ss_dssp             HHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEE
T ss_pred             HHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc---CCcceEec
Confidence              0112234567888887765321 1  12222   3344444    3555566666642   34555554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.81  E-value=0.0012  Score=55.96  Aligned_cols=122  Identities=11%  Similarity=0.171  Sum_probs=70.1

Q ss_pred             CCC---CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceE
Q psy9582           1 MLK---KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVS   72 (329)
Q Consensus         1 ~~~---~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~   72 (329)
                      ||.   +.+++.|+||+|  .+|.++|..|++.|.       +|++.|++    ++..+ .+.++.......   ..+++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga-------~V~i~~~~----~~~~~-~~~~~~~~~~~~~~~~~D~~   68 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-------EVALSYQA----ERLRP-EAEKLAEALGGALLFRADVT   68 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTC-------EEEEEESS----GGGHH-HHHHHHHHTTCCEEEECCTT
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCC-------EEEEEeCc----HHHHH-HHHHhhhccCcccccccccC
Confidence            564   347899999977  699999999999997       89999988    33222 222222111000   00000


Q ss_pred             e-------ecCcccccCCccEEEEeCCCCCC-------CCCCHH---HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          73 V-------HENPITAFKDANIAILIGSFPRK-------SNMERS---ELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        73 ~-------~~~~~~al~~aDiVi~~~g~~~~-------~g~~~~---~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      -       .....+.+..-|++|..+|....       ...+..   ..+..|+.....+++.....-...+.||+++-
T Consensus        69 ~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS  147 (256)
T d1ulua_          69 QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY  147 (256)
T ss_dssp             CHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEee
Confidence            0       01112335678999998876421       112222   34556766666666666555434567777753

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.81  E-value=0.0018  Score=52.05  Aligned_cols=77  Identities=14%  Similarity=0.152  Sum_probs=44.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-C-CccceEeecCcccccCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-P-LLVDVSVHENPITAFKD   83 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~-~~~~i~~~~~~~~al~~   83 (329)
                      +||+|+||+|.+|.-+...|.....+      ||.-+-...   .+...|......+... . ....+....+......+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~------ei~~l~~~s---~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHM------TITALTVSA---QSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSAD   72 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTE------EEEEEEEET---TCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTT
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCC------ceEeeEeec---ccccccccccccccccccccccccccchhhhhhhcc
Confidence            57999999999999999999988654      665443220   1111121111111110 1 11233344454556789


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      +|++|.+.
T Consensus        73 ~dvvf~al   80 (179)
T d2g17a1          73 VDVVFLAT   80 (179)
T ss_dssp             CCEEEECS
T ss_pred             cceeeccc
Confidence            99999973

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.79  E-value=0.0015  Score=48.70  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.||+|||| |.+|.-+|..|...|.       +|+|+++.
T Consensus        20 ~~p~~v~IiGg-G~iG~E~A~~l~~~g~-------~Vtlv~~~   54 (117)
T d1onfa2          20 KESKKIGIVGS-GYIAVELINVIKRLGI-------DSYIFARG   54 (117)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECSS
T ss_pred             CCCCEEEEECC-chHHHHHHHHHHhccc-------cceeeehh
Confidence            45789999999 9999999999998887       99999986

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.77  E-value=0.0013  Score=58.07  Aligned_cols=35  Identities=23%  Similarity=0.229  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++++|+|+||+|++|++++..|++.|.       +|+.+-++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~   36 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-------HVRAQVHS   36 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-------eEEEEECC
Confidence            457999999999999999999999887       89998777

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.76  E-value=0.0032  Score=50.97  Aligned_cols=95  Identities=18%  Similarity=0.305  Sum_probs=62.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|+|. |.+|..++..|...+.       +|..+|..    ... .....+.         .+....++.+.+++|
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~-------~v~~~d~~----~~~-~~~~~~~---------~~~~~~~l~~~l~~s  101 (188)
T d2naca1          44 AMHVGTVAA-GRIGLAVLRRLAPFDV-------HLHYTDRH----RLP-ESVEKEL---------NLTWHATREDMYPVC  101 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGTC-------EEEEECSS----CCC-HHHHHHH---------TCEECSSHHHHGGGC
T ss_pred             ccceeeccc-cccchhhhhhhhccCc-------eEEEEeec----ccc-ccccccc---------cccccCCHHHHHHhc
Confidence            479999999 9999999999988777       89999987    111 1111111         123345678899999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      |+|++.... +...++=       |       .+.++.. ++++++||++---
T Consensus       102 D~v~~~~plt~~T~~li-------~-------~~~l~~m-k~ga~lIN~aRG~  139 (188)
T d2naca1         102 DVVTLNCPLHPETEHMI-------N-------DETLKLF-KRGAYIVNTARGK  139 (188)
T ss_dssp             SEEEECSCCCTTTTTCB-------S-------HHHHTTS-CTTEEEEECSCGG
T ss_pred             cchhhcccccccchhhh-------H-------HHHHHhC-CCCCEEEecCchh
Confidence            999986432 2222210       1       1334444 5899999998543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0045  Score=52.90  Aligned_cols=121  Identities=10%  Similarity=0.059  Sum_probs=76.8

Q ss_pred             CCEEE-EEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEe------
Q psy9582           5 PVRIS-ITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSV------   73 (329)
Q Consensus         5 ~~kI~-IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~------   73 (329)
                      .++|+ |+||++.+|..+|..|++. +.       .|++.+++    .++++..+.+++.......   .+++-      
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~   70 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-------DVVLTARD----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRA   70 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-------EEEEEESS----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHH
Confidence            46785 7799999999999999874 65       89999999    6666655556654321100   00000      


Q ss_pred             -ecCcccccCCccEEEEeCCCCCC-CC--CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          74 -HENPITAFKDANIAILIGSFPRK-SN--ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        74 -~~~~~~al~~aDiVi~~~g~~~~-~g--~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                       .....+.+..-|++|..||.... +.  .+   ....+..|+.....+++.+-+...+.+.||+++--.
T Consensus        71 ~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          71 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             HHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence             01122335678999999886432 21  11   223566777777777777766655567888887543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.70  E-value=0.0056  Score=44.99  Aligned_cols=70  Identities=11%  Similarity=-0.001  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +.+||.|+|+ |.+|..-+..|+..|.       +|++++...    .  . ....+.+..  .. .+.-..-..+.+.+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga-------~v~v~~~~~----~--~-~~~~~~~~~--~i-~~~~~~~~~~dl~~   72 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGA-------RLTVNALTF----I--P-QFTVWANEG--ML-TLVEGPFDETLLDS   72 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTB-------EEEEEESSC----C--H-HHHHHHTTT--SC-EEEESSCCGGGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEeccC----C--h-HHHHHHhcC--Cc-eeeccCCCHHHhCC
Confidence            3579999999 9999999999999987       899999872    1  1 111121111  00 11111123467999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      +++|+.+.
T Consensus        73 ~~lv~~at   80 (113)
T d1pjqa1          73 CWLAIAAT   80 (113)
T ss_dssp             CSEEEECC
T ss_pred             CcEEeecC
Confidence            99999873

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0025  Score=50.36  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceE-EEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIIL-QLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ..+||+|+||+|.||+.++..+.+.+-+      +| ..+|+..   ...   ...|+..........+.++.+..+.++
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~------~lv~~~~~~~---~~~---~g~d~~~~~~~~~~~~~~~~~~~~~~~   70 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGV------QLGAALEREG---SSL---LGSDAGELAGAGKTGVTVQSSLDAVKD   70 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTE------ECCCEECCTT---CTT---CSCCTTCSSSSSCCSCCEESCSTTTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEeccc---chh---ccchhhhhhccccCCceeeccHHHHhc
Confidence            3589999999999999999988876432      33 4455541   111   112332221111134566777788899


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      .+|+||=.
T Consensus        71 ~~DViIDF   78 (162)
T d1diha1          71 DFDVFIDF   78 (162)
T ss_dssp             SCSEEEEC
T ss_pred             ccceEEEe
Confidence            99988753

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.61  E-value=0.0021  Score=51.38  Aligned_cols=76  Identities=17%  Similarity=0.199  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
                      +.++|.|+|+ |.++.++++.|.+.+        +|++++++    .++++..+.++....... ...+.. .+....+.
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~--------~i~I~nR~----~~ka~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~   82 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN--------NIIIANRT----VEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLD   82 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS--------EEEEECSS----HHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc--------ceeeehhh----hhHHHHHHHHHHHhhchhhhhhhhh-hhhhhccc
Confidence            3479999998 999999998885433        89999999    667766666665432111 122333 34456778


Q ss_pred             CccEEEEeCCC
Q psy9582          83 DANIAILIGSF   93 (329)
Q Consensus        83 ~aDiVi~~~g~   93 (329)
                      ++|++|.+...
T Consensus        83 ~~dliIn~tp~   93 (177)
T d1nvta1          83 GVDIIINATPI   93 (177)
T ss_dssp             TCCEEEECSCT
T ss_pred             hhhhhccCCcc
Confidence            99999997443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.60  E-value=0.0026  Score=51.35  Aligned_cols=92  Identities=14%  Similarity=0.192  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++++|+|. |.+|+.++..+..-+.       +|..+|..    ......  .+.         .+.. .+..+.++.|
T Consensus        44 ~k~vgiiG~-G~IG~~va~~~~~fg~-------~v~~~d~~----~~~~~~--~~~---------~~~~-~~l~ell~~s   99 (184)
T d1ygya1          44 GKTVGVVGL-GRIGQLVAQRIAAFGA-------YVVAYDPY----VSPARA--AQL---------GIEL-LSLDDLLARA   99 (184)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEECTT----SCHHHH--HHH---------TCEE-CCHHHHHHHC
T ss_pred             ceeeeeccc-cchhHHHHHHhhhccc-------eEEeecCC----CChhHH--hhc---------Ccee-ccHHHHHhhC
Confidence            479999998 9999999998887676       89999987    221111  111         1121 3567899999


Q ss_pred             cEEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGS-FPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g-~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|++... .+...++       -|       .+.+... +|++++||++--
T Consensus       100 Div~~~~Plt~~T~~l-------in-------~~~l~~m-k~~a~lIN~sRG  136 (184)
T d1ygya1         100 DFISVHLPKTPETAGL-------ID-------KEALAKT-KPGVIIVNAARG  136 (184)
T ss_dssp             SEEEECCCCSTTTTTC-------BC-------HHHHTTS-CTTEEEEECSCT
T ss_pred             CEEEEcCCCCchhhhh-------hh-------HHHHhhh-CCCceEEEecch
Confidence            99999643 2222221       01       1333443 589999999843

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.56  E-value=0.031  Score=47.00  Aligned_cols=116  Identities=12%  Similarity=0.047  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-------Cc--cceE-e
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-------LL--VDVS-V   73 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-------~~--~~i~-~   73 (329)
                      +.+.|.|+||++.+|..+|..|+..|.       .+.+.+++    .++++.. .++......       +.  .+.. +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-------~vii~~r~----~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~   71 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-------KNFVILDR----VENPTAL-AELKAINPKVNITFHTYDVTVPVAES   71 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-------SEEEEEES----SCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEECC----cccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHH
Confidence            457899999999999999999999997       67777666    2223222 222211100       00  0000 0


Q ss_pred             ---ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHhhhc-CCCeEEEEEc
Q psy9582          74 ---HENPITAFKDANIAILIGSFPRKSNMERSELLAINSS----IFIEQGKALNSVA-SRDVKVLVVG  133 (329)
Q Consensus        74 ---~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~----~~~~i~~~i~~~~-~p~a~viv~t  133 (329)
                         .....+.+..-|++|..||...  ..+.+..+..|+.    ..+.+.+.+.+.. .+.+.||+++
T Consensus        72 ~~~~~~~~~~~g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is  137 (254)
T d1sbya1          72 KKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             HHHHHHHHHHcCCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe
Confidence               0111223567899999988654  2345566666665    5566667775532 2457777775

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=96.55  E-value=0.0031  Score=55.89  Aligned_cols=74  Identities=9%  Similarity=0.124  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ....++|||+ |..+...+..+.. .+ +.     +|++||++    .++.+..+.++++.   ....+....+.+++++
T Consensus       127 da~~l~iiG~-G~QA~~~~~a~~~v~~-i~-----~V~v~~r~----~~~~~~~~~~l~~~---~g~~v~~~~s~~eav~  192 (340)
T d1x7da_         127 NARKMALIGN-GAQSEFQALAFHKHLG-IE-----EIVAYDTD----PLATAKLIANLKEY---SGLTIRRASSVAEAVK  192 (340)
T ss_dssp             TCCEEEEECC-STTHHHHHHHHHHHSC-CC-----EEEEECSS----HHHHHHHHHHHTTC---TTCEEEECSSHHHHHT
T ss_pred             CCceEEEEcc-cHHHHHHHHHHhhhcc-ee-----eeEEEecC----hHHHHHHHHhhhhc---cCCCceecCCHHHHHh
Confidence            4579999998 9998877766654 44 33     99999999    56566566666432   1235777788899999


Q ss_pred             CccEEEEeC
Q psy9582          83 DANIAILIG   91 (329)
Q Consensus        83 ~aDiVi~~~   91 (329)
                      +||+|+.+.
T Consensus       193 ~ADIi~t~T  201 (340)
T d1x7da_         193 GVDIITTVT  201 (340)
T ss_dssp             TCSEEEECC
T ss_pred             cCCceeecc
Confidence            999998753

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.49  E-value=0.0015  Score=51.44  Aligned_cols=37  Identities=19%  Similarity=0.479  Sum_probs=25.9

Q ss_pred             CCCCCEEEEEcCCCchHHHHH-HHHHhCCCCCCCCCceEEEE-ecC
Q psy9582           2 LKKPVRISITGAAGQIGYNII-FRIANGDLLGKDQPIILQLL-EAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la-~~l~~~~~~~~~~~~ei~L~-D~~   45 (329)
                      |++++||+|||+ |.+|..+. ..|...+.+      |++.+ |++
T Consensus         1 M~kkirvaIIGa-G~ig~~~~~~~l~~~~~~------el~avas~~   39 (157)
T d1nvmb1           1 MNQKLKVAIIGS-GNIGTDLMIKVLRNAKYL------EMGAMVGID   39 (157)
T ss_dssp             CCSCEEEEEECC-SHHHHHHHHHHHHHCSSE------EEEEEECSC
T ss_pred             CCCCcEEEEEcC-cHHHHHHHHHHHhhCCcc------eEEEEEecc
Confidence            667799999996 99998654 444444443      66665 666

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.43  E-value=0.0068  Score=50.96  Aligned_cols=149  Identities=19%  Similarity=0.171  Sum_probs=84.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEe-------ecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSV-------HEN   76 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~-------~~~   76 (329)
                      =|.|+||++.+|..++..|++.|.       +|++.|.+.   ++.++.....++......   ..+++-       ...
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-------~V~i~~~~~---~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   72 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-------KVLVNYARS---AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHH
Confidence            367889999999999999999997       899987762   334444433343221000   001100       011


Q ss_pred             cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcCchh------hHH
Q psy9582          77 PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGNPVN------TNT  140 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tNP~~------~~~  140 (329)
                      ..+.+..-|++|..||......   .+   ....+..|+.    ..+..++.|.+.  ..+.||+++--..      ...
T Consensus        73 ~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~IVnisS~~~~~~~~~~~~  150 (244)
T d1edoa_          73 AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK--RKGRIINIASVVGLIGNIGQAN  150 (244)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCTHHHHCCTTCHH
T ss_pred             HHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc--CCcEEEEEcChhhcCCCCCCHH
Confidence            1233567899999888653221   22   3344555544    566667777764  4678888764332      222


Q ss_pred             HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      |..+|.               .-..+.+.+|..++  +..|+.-
T Consensus       151 Y~asKa---------------al~~ltk~lA~el~--~~gIrvN  177 (244)
T d1edoa_         151 YAAAKA---------------GVIGFSKTAAREGA--SRNINVN  177 (244)
T ss_dssp             HHHHHH---------------HHHHHHHHHHHHHH--TTTEEEE
T ss_pred             HHHHHH---------------HHHHChHHHHHHHh--hhCcEEE
Confidence            222222               12346677777775  5567755

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.39  E-value=0.0051  Score=48.62  Aligned_cols=67  Identities=13%  Similarity=0.192  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +..||.|+|+ |+++.++++.|.+.+.-      +|.+++++    .++.+..+..+..        ..+ ..  ....+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~------~I~I~nR~----~~ka~~L~~~~~~--------~~~-~~--~~~~~   73 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFE------KLKIYARN----VKTGQYLAALYGY--------AYI-NS--LENQQ   73 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCC------CEEEECSC----HHHHHHHHHHHTC--------EEE-SC--CTTCC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCC------EEEEeccc----HHHHHHHHHhhhh--------hhh-hc--ccccc
Confidence            4578999999 99999999999988762      79999998    5555543322211        111 11  12357


Q ss_pred             ccEEEEeCC
Q psy9582          84 ANIAILIGS   92 (329)
Q Consensus        84 aDiVi~~~g   92 (329)
                      +|+||.+..
T Consensus        74 ~DliINaTp   82 (167)
T d1npya1          74 ADILVNVTS   82 (167)
T ss_dssp             CSEEEECSS
T ss_pred             hhhheeccc
Confidence            899998743

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.39  E-value=0.0032  Score=50.49  Aligned_cols=70  Identities=11%  Similarity=0.115  Sum_probs=45.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc--
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF--   81 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al--   81 (329)
                      ++||+|||+ |.+|..++..+...+-+      +|+ ++|++    .++++......     ......++.++..+.+  
T Consensus         1 kiki~iIG~-G~~g~~~~~~l~~~~~~------~i~ai~d~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~ll~~   64 (184)
T d1ydwa1           1 QIRIGVMGC-ADIARKVSRAIHLAPNA------TISGVASRS----LEKAKAFATAN-----NYPESTKIHGSYESLLED   64 (184)
T ss_dssp             CEEEEEESC-CTTHHHHHHHHHHCTTE------EEEEEECSS----HHHHHHHHHHT-----TCCTTCEEESSHHHHHHC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHhCCCC------EEEEEEeCC----ccccccchhcc-----ccccceeecCcHHHhhhc
Confidence            369999998 99999999888765433      565 77888    44444222111     1122345556655554  


Q ss_pred             CCccEEEEe
Q psy9582          82 KDANIAILI   90 (329)
Q Consensus        82 ~~aDiVi~~   90 (329)
                      .+.|+|+++
T Consensus        65 ~~iD~v~I~   73 (184)
T d1ydwa1          65 PEIDALYVP   73 (184)
T ss_dssp             TTCCEEEEC
T ss_pred             cccceeeec
Confidence            468999997

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.38  E-value=0.0031  Score=50.02  Aligned_cols=65  Identities=17%  Similarity=0.172  Sum_probs=42.6

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceE-EEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIIL-QLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      |+ ++||+|+|+ |++|+.++..+.+..-+      |+ .++|++    .+....             ..+....+..+.
T Consensus         1 M~-kirvgiiG~-G~ig~~~~~~l~~~~~~------elvav~~~~----~~~~~~-------------~~~~~~~~~~~~   55 (170)
T d1f06a1           1 MT-NIRVAIVGY-GNLGRSVEKLIAKQPDM------DLVGIFSRR----ATLDTK-------------TPVFDVADVDKH   55 (170)
T ss_dssp             CC-CEEEEEECC-SHHHHHHHHHHTTCSSE------EEEEEEESS----SCCSSS-------------SCEEEGGGGGGT
T ss_pred             CC-cceEEEECC-hHHHHHHHHHHHhCCCc------EEEEEEecc----cccccc-------------cccccchhhhhh
Confidence            44 489999998 99999999888775433      44 466666    222110             122333455566


Q ss_pred             cCCccEEEEeC
Q psy9582          81 FKDANIAILIG   91 (329)
Q Consensus        81 l~~aDiVi~~~   91 (329)
                      +.+.|+|+++.
T Consensus        56 ~~~~D~Vvi~t   66 (170)
T d1f06a1          56 ADDVDVLFLCM   66 (170)
T ss_dssp             TTTCSEEEECS
T ss_pred             ccccceEEEeC
Confidence            78999999974

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.035  Score=46.57  Aligned_cols=46  Identities=13%  Similarity=0.247  Sum_probs=35.8

Q ss_pred             CEEEEE-cCCCchHHHHHHHHHh---CCCCCCCCCceEEEEecCCcccccchhhhHhhhhh
Q psy9582           6 VRISIT-GAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED   62 (329)
Q Consensus         6 ~kI~Ii-Ga~G~vG~~la~~l~~---~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~   62 (329)
                      -||+|| ||++.+|.++|..|++   .|.       .|++.|++    +++++....++..
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~-------~Vv~~~r~----~~~l~~~~~~l~~   55 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGS-------VMLVSARS----ESMLRQLKEELGA   55 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-------EEEEEESC----HHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCC-------EEEEEECC----HHHHHHHHHHHHh
Confidence            466655 9999999999999986   455       89999999    6667666666643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.37  E-value=0.0018  Score=52.54  Aligned_cols=90  Identities=13%  Similarity=0.195  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..+|+|+|. |.+|..++..+...+.       +|..+|..    ......              ......++.+.++.|
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~-------~v~~~d~~----~~~~~~--------------~~~~~~~l~ell~~s   97 (188)
T d1sc6a1          44 GKKLGIIGY-GHIGTQLGILAESLGM-------YVYFYDIE----NKLPLG--------------NATQVQHLSDLLNMS   97 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCCCCT--------------TCEECSCHHHHHHHC
T ss_pred             ceEEEEeec-ccchhhhhhhcccccc-------eEeecccc----ccchhh--------------hhhhhhhHHHHHhhc
Confidence            479999999 9999999999988887       89999987    211110              011123567889999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|++.... +...++       -|       .+.++.. ++++++|+++-.
T Consensus        98 Dii~i~~plt~~T~~l-------i~-------~~~l~~m-k~~a~lIN~aRG  134 (188)
T d1sc6a1          98 DVVSLHVPENPSTKNM-------MG-------AKEISLM-KPGSLLINASRG  134 (188)
T ss_dssp             SEEEECCCSSTTTTTC-------BC-------HHHHHHS-CTTEEEEECSCS
T ss_pred             cceeecccCCcchhhh-------cc-------HHHHhhC-CCCCEEEEcCcH
Confidence            999997543 222221       01       1334444 589999999844

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.36  E-value=0.004  Score=50.20  Aligned_cols=76  Identities=11%  Similarity=0.115  Sum_probs=50.3

Q ss_pred             CCEEEEEc-CCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITG-AAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiG-a~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..||+++| +..+|..+++..+..-|.       ++++.-...   -........+.+.........++++.+..+++++
T Consensus         5 ~lkia~vGD~~nnV~~Sli~~~~~~G~-------~l~l~~P~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~   74 (185)
T d1dxha2           5 DISYAYLGDARNNMGNSLLLIGAKLGM-------DVRIAAPKA---LWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKG   74 (185)
T ss_dssp             GCEEEEESCCSSHHHHHHHHHHHHTTC-------EEEEECCGG---GSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTT
T ss_pred             CCEEEEEcCCcchHHHHHHHHHHHcCC-------EEEEEccHH---HHhhhHHHHHHHHHhhccCCeEEEEeChhhcccc
Confidence            47999999 424789999988888886       899997651   1111111122221110112468888999999999


Q ss_pred             ccEEEEe
Q psy9582          84 ANIAILI   90 (329)
Q Consensus        84 aDiVi~~   90 (329)
                      +|+|...
T Consensus        75 aDvVyt~   81 (185)
T d1dxha2          75 VDFVHTD   81 (185)
T ss_dssp             CSEEEEC
T ss_pred             ccEEEee
Confidence            9998875

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.19  E-value=0.0047  Score=49.52  Aligned_cols=74  Identities=16%  Similarity=0.080  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh---hHhhhhhcccCCccceEee-----cC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEIEDCIFPLLVDVSVH-----EN   76 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl~~~~~~~~~~i~~~-----~~   76 (329)
                      ..+|.|+|+ |.+|.+++..|...+.-      +|++++++    .++++.   ....+...   +...+...     .+
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~------~i~i~nR~----~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~   83 (182)
T d1vi2a1          18 GKTMVLLGA-GGASTAIGAQGAIEGLK------EIKLFNRR----DEFFDKALAFAQRVNEN---TDCVVTVTDLADQQA   83 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEEECS----STTHHHHHHHHHHHHHH---SSCEEEEEETTCHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHhhcCCc------eEeeeccc----hHHHHHHHHHHHHHHhh---cCcceEeeecccccc
Confidence            479999999 99999999999988753      89999998    443332   22223221   11112222     12


Q ss_pred             cccccCCccEEEEeCC
Q psy9582          77 PITAFKDANIAILIGS   92 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g   92 (329)
                      ..+.+..+|+||.+..
T Consensus        84 ~~~~~~~~diiIN~Tp   99 (182)
T d1vi2a1          84 FAEALASADILTNGTK   99 (182)
T ss_dssp             HHHHHHTCSEEEECSS
T ss_pred             hhhhhcccceeccccC
Confidence            3445789999999743

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.16  E-value=0.0034  Score=49.49  Aligned_cols=67  Identities=12%  Similarity=0.170  Sum_probs=41.6

Q ss_pred             CCEEEEEcCCCchHHH-HHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-
Q psy9582           5 PVRISITGAAGQIGYN-IIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-   82 (329)
                      .+||+|||+ |++|+. +++.+...+-+      +++++|.+    .++++..+.++..   +     ...++..+.++ 
T Consensus         1 tirvgiiG~-G~~~~~~~~~~l~~~~~~------~~~~~d~~----~~~~~~~~~~~~~---~-----~~~~~~~~ll~~   61 (167)
T d1xeaa1           1 SLKIAMIGL-GDIAQKAYLPVLAQWPDI------ELVLCTRN----PKVLGTLATRYRV---S-----ATCTDYRDVLQY   61 (167)
T ss_dssp             CEEEEEECC-CHHHHHTHHHHHTTSTTE------EEEEECSC----HHHHHHHHHHTTC---C-----CCCSSTTGGGGG
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHHhCCCc------EEEEEECC----HHHHHHHHHhccc---c-----cccccHHHhccc
Confidence            379999998 999975 56666554332      88999988    5555433332221   1     12234444443 


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +.|+|+++
T Consensus        62 ~iD~V~I~   69 (167)
T d1xeaa1          62 GVDAVMIH   69 (167)
T ss_dssp             CCSEEEEC
T ss_pred             ccceeccc
Confidence            67999987

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.14  E-value=0.0078  Score=48.16  Aligned_cols=39  Identities=15%  Similarity=0.253  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      ++-||.|+|| |.+|.+-+......|-       .|..+|++    .++++
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA-------~V~v~D~~----~~~~~   66 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGA-------VVMATDVR----AATKE   66 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----STTHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCC-------EEEEEecc----HHHHH
Confidence            3579999999 9999998887777776       89999999    55554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.13  E-value=0.015  Score=48.85  Aligned_cols=111  Identities=7%  Similarity=0.083  Sum_probs=66.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------Cccc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------NPIT   79 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~~~~   79 (329)
                      ...|+||++.+|..+|..|++.|.       +|.+.|++    .+.++... .+......+  ++.-..       ...+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-------~V~i~~r~----~~~~~~~~-~~~~~~~~~--dv~~~~~~~~~~~~~~~   67 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-------TVACHDES----FKQKDELE-AFAETYPQL--KPMSEQEPAELIEAVTS   67 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-------EEEECCGG----GGSHHHHH-HHHHHCTTS--EECCCCSHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHH-hhhCcEEEe--ccCCHHHHHHHHHHHHH
Confidence            467999999999999999999997       89999998    34343221 111111011  111111       1233


Q ss_pred             ccCCccEEEEeCCCCC--CC--CCCHH---HHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          80 AFKDANIAILIGSFPR--KS--NMERS---ELLAIN----SSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        80 al~~aDiVi~~~g~~~--~~--g~~~~---~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      .+..-|++|..+|...  ++  ..+.+   ..+..|    ...++.+.+.|++.  ..+.||+++
T Consensus        68 ~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~--~~G~IV~is  130 (252)
T d1zmta1          68 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR--KSGHIIFIT  130 (252)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEC
T ss_pred             HcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc--ccceeeccc
Confidence            4557899998777532  22  12322   333444    34667777888775  356677776

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.12  E-value=0.0038  Score=50.96  Aligned_cols=89  Identities=17%  Similarity=0.164  Sum_probs=58.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      ++|+|+|. |.+|+.++..+..-|.       +|..||..    .....       .      ..+.. .++.+.++.||
T Consensus        46 ktvgIiG~-G~IG~~va~~l~~fg~-------~v~~~d~~----~~~~~-------~------~~~~~-~~l~~l~~~~D   99 (199)
T d1dxya1          46 QTVGVMGT-GHIGQVAIKLFKGFGA-------KVIAYDPY----PMKGD-------H------PDFDY-VSLEDLFKQSD   99 (199)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCSSC-------C------TTCEE-CCHHHHHHHCS
T ss_pred             eeeeeeec-ccccccccccccccce-------eeeccCCc----cchhh-------h------cchhH-HHHHHHHHhcc
Confidence            79999999 9999999999988887       99999987    21110       0      01111 34678889999


Q ss_pred             EEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          86 IAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        86 iVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      +|++.... +...++       -|       .+.++.. ++++++||++-.
T Consensus       100 ~v~~~~plt~~T~~l-------i~-------~~~l~~m-k~~a~lIN~aRG  135 (199)
T d1dxya1         100 VIDLHVPGIEQNTHI-------IN-------EAAFNLM-KPGAIVINTARP  135 (199)
T ss_dssp             EEEECCCCCGGGTTS-------BC-------HHHHHHS-CTTEEEEECSCT
T ss_pred             cceeeeccccccccc-------cc-------HHHhhcc-CCceEEEecccH
Confidence            99996322 211111       01       1333333 588999999854

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.10  E-value=0.0029  Score=51.70  Aligned_cols=91  Identities=15%  Similarity=0.169  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .++|+|+|. |.||+.+|..+..-|.       +|..||..    .....  .   ...       +. ..++.+.++.|
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~-------~V~~~d~~----~~~~~--~---~~~-------~~-~~~l~~~l~~s   97 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGA-------KVITYDIF----RNPEL--E---KKG-------YY-VDSLDDLYKQA   97 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS----CCHHH--H---HTT-------CB-CSCHHHHHHHC
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcc-------cccccCcc----ccccc--c---cce-------ee-ecccccccccc
Confidence            479999998 9999999999988787       89999987    22111  0   110       11 13567889999


Q ss_pred             cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      |+|++.... +...++       -|    +   +.++.. ++++++|+++--
T Consensus        98 Dii~~~~plt~~T~~l-------i~----~---~~l~~m-k~~a~lIN~sRG  134 (197)
T d1j4aa1          98 DVISLHVPDVPANVHM-------IN----D---ESIAKM-KQDVVIVNVSRG  134 (197)
T ss_dssp             SEEEECSCCCGGGTTC-------BS----H---HHHHHS-CTTEEEEECSCG
T ss_pred             ccccccCCcccccccc-------cc----H---HHHhhh-CCccEEEecCch
Confidence            999997432 111111       01    1   222333 578999999853

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.08  E-value=0.0068  Score=47.56  Aligned_cols=77  Identities=14%  Similarity=0.133  Sum_probs=50.3

Q ss_pred             CCCEEEEEc-CCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITG-AAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiG-a~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +..||+++| +..+|-.+++..+..-|.       ++++.-...   -....................+.++.+..++++
T Consensus         2 ~g~ki~~vGD~~nnV~~Sli~~~~~~g~-------~i~~~~P~~---~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~   71 (161)
T d1vlva2           2 KGVKVVFMGDTRNNVATSLMIACAKMGM-------NFVACGPEE---LKPRSDVFKRCQEIVKETDGSVSFTSNLEEALA   71 (161)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHTTC-------EEEEESCGG---GCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHT
T ss_pred             CCCEEEEEcCCccHHHHHHHHHHHHcCC-------EEEEecchh---hhhhhhHHHHHHHHHhhcCCceEEEecHHHhhh
Confidence            357999999 435788888888888776       899886641   111111111111111112247888899999999


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +||+|...
T Consensus        72 ~aDviyt~   79 (161)
T d1vlva2          72 GADVVYTD   79 (161)
T ss_dssp             TCSEEEEC
T ss_pred             hhhheecc
Confidence            99999985

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.07  E-value=0.011  Score=50.11  Aligned_cols=35  Identities=26%  Similarity=0.211  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|  .+|.++|..|+..|.       +|++.|++
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-------~V~i~~r~   40 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-------TLAFTYLN   40 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-------EEEEEESS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            357899999877  699999999999998       99999998

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.0035  Score=49.28  Aligned_cols=67  Identities=9%  Similarity=0.104  Sum_probs=42.3

Q ss_pred             CCEEEEEcCCCchHHH-HHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGAAGQIGYN-IIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ++||+|||+ |.+|.. ++..+...+-+.     -+.++|.+    .+++.....+..         +...++..+.+++
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~-----i~~v~d~~----~~~~~~~~~~~~---------~~~~~~~~~l~~~   61 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWT-----LQGAWSPT----RAKALPICESWR---------IPYADSLSSLAAS   61 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEE-----EEEEECSS----CTTHHHHHHHHT---------CCBCSSHHHHHTT
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcE-----EEEEEech----hHhhhhhhhccc---------ccccccchhhhhh
Confidence            379999998 999975 566676543331     35688888    454443332221         1123444555689


Q ss_pred             ccEEEEe
Q psy9582          84 ANIAILI   90 (329)
Q Consensus        84 aDiVi~~   90 (329)
                      .|+|+++
T Consensus        62 ~D~V~I~   68 (164)
T d1tlta1          62 CDAVFVH   68 (164)
T ss_dssp             CSEEEEC
T ss_pred             ccccccc
Confidence            9999987

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.07  E-value=0.0028  Score=50.80  Aligned_cols=33  Identities=24%  Similarity=0.393  Sum_probs=26.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA   44 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~   44 (329)
                      +||+|+||+|.+|.-+...|.....+      ||..+--
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~------ei~~l~s   34 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEA------KITYLSS   34 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTE------EEEEEEC
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCc------eEEEeec
Confidence            57999999999999999999877654      6666633

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=96.06  E-value=0.0038  Score=51.79  Aligned_cols=74  Identities=16%  Similarity=0.108  Sum_probs=44.7

Q ss_pred             CCCCEEEEEcCCCchHH-HHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           3 KKPVRISITGAAGQIGY-NIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      .++.||+|||+ |.+|. +++..+...+.+      +|+ ++|++    .++++.....+. .  + ...+...++..+.
T Consensus        31 ~~~iriaiIG~-G~~~~~~~~~~~~~~~~~------~ivav~d~~----~~~a~~~~~~~~-i--~-~~~~~~~~d~~el   95 (221)
T d1h6da1          31 DRRFGYAIVGL-GKYALNQILPGFAGCQHS------RIEALVSGN----AEKAKIVAAEYG-V--D-PRKIYDYSNFDKI   95 (221)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHTTTCSSE------EEEEEECSC----HHHHHHHHHHTT-C--C-GGGEECSSSGGGG
T ss_pred             CCCEEEEEEcC-cHHHHHHHHHHHHhCCCc------eEEEEecCC----HHHHHHHHHhhc-c--c-cccccccCchhhh
Confidence            35689999998 99997 455555544322      565 89998    555543322221 1  1 1234445665665


Q ss_pred             cC--CccEEEEeC
Q psy9582          81 FK--DANIAILIG   91 (329)
Q Consensus        81 l~--~aDiVi~~~   91 (329)
                      ++  +.|+|+++.
T Consensus        96 l~~~~iD~V~I~t  108 (221)
T d1h6da1          96 AKDPKIDAVYIIL  108 (221)
T ss_dssp             GGCTTCCEEEECS
T ss_pred             cccccceeeeecc
Confidence            64  578899873

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.0047  Score=47.87  Aligned_cols=105  Identities=10%  Similarity=0.053  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCc-ccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENP-ITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~-~~al~   82 (329)
                      +-.|.|+|. |.+|..++..|...+.       +++++|.+    +++......++........ .+.+-...+ ...+.
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~-------~v~vId~d----~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~   70 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQ-------NVTVISNL----PEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID   70 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC-------CEEEEECC----CHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-------CEEEEecc----chhHHHHHHHhhcCCcEEEEccCcchHHHHHhccc
Confidence            357999999 9999999999999887       89999998    3333222223321110000 110000111 33477


Q ss_pred             CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchh
Q psy9582          83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVN  137 (329)
Q Consensus        83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~  137 (329)
                      .||.||++.+.         +  ..|+.    ++..+++.. |+..++.-+ +|..
T Consensus        71 ~a~~vi~~~~~---------d--~~n~~----~~~~~r~~~-~~~~iia~~~~~~~  110 (153)
T d1id1a_          71 RCRAILALSDN---------D--ADNAF----VVLSAKDMS-SDVKTVLAVSDSKN  110 (153)
T ss_dssp             TCSEEEECSSC---------H--HHHHH----HHHHHHHHT-SSSCEEEECSSGGG
T ss_pred             cCCEEEEcccc---------H--HHHHH----HHHHHHHhC-CCCceEEEEcCHHH
Confidence            89999987321         1  23433    334455654 776555554 5543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.04  E-value=0.012  Score=49.60  Aligned_cols=35  Identities=20%  Similarity=0.190  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|  .+|.++|..|++.|.       +|.|.+++
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga-------~Vil~~~~   41 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA-------QLVLTGFD   41 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC-------EEEEEECS
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC-------EEEEEeCC
Confidence            347899999765  499999999999997       89999998

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.97  E-value=0.0059  Score=47.61  Aligned_cols=70  Identities=21%  Similarity=0.363  Sum_probs=43.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN   85 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD   85 (329)
                      .||+|+||+|.+|.-+...|...+. ..   .++.++..+    .  ..|.  .+...    ...............+.|
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f-p~---~~l~~~~s~----~--s~G~--~~~~~----~~~~~~~~~~~~~~~~~d   65 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL-PI---DKIRYLASA----R--SAGK--SLKFK----DQDITIEETTETAFEGVD   65 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS-CE---EEEEEEECG----G--GTTC--EEEET----TEEEEEEECCTTTTTTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC-Cc---eEEEEeccc----c--cccc--ccccc----CCcccccccchhhhhhhh
Confidence            5899999999999999988877752 10   177777654    1  1121  11111    112223333456778999


Q ss_pred             EEEEeC
Q psy9582          86 IAILIG   91 (329)
Q Consensus        86 iVi~~~   91 (329)
                      +++++.
T Consensus        66 ~~f~~~   71 (154)
T d2gz1a1          66 IALFSA   71 (154)
T ss_dssp             EEEECS
T ss_pred             hhhhcc
Confidence            999974

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.013  Score=46.06  Aligned_cols=130  Identities=11%  Similarity=0.075  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCccccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~al   81 (329)
                      ...+|.|+|+ |.+|...+..+...|.       +++.+|.+    .++++ .+..+-.   ..  -+...  .......
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga-------~~i~~~~~----~~~~~-~a~~lGa---d~--~i~~~~~~~~~~~~   91 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGA-------HVVAFTTS----EAKRE-AAKALGA---DE--VVNSRNADEMAAHL   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS----GGGHH-HHHHHTC---SE--EEETTCHHHHHTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccc-------cchhhccc----hhHHH-HHhccCC---cE--EEECchhhHHHHhc
Confidence            3468999998 9999998888877776       67788887    44443 3333321   00  01111  1123345


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH-HHHHHCCCCCCCcEEE---
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY-ITMKSAPDLSYKNFTA---  157 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~-~~~~~~~~~~~~~i~~---  157 (329)
                      ++.|++|.+.|.+.    +           +.   ..+.- ..+.+.++.++-|.+.... ......  +...++.|   
T Consensus        92 ~~~D~vid~~g~~~----~-----------~~---~~~~~-l~~~G~iv~~G~~~~~~~~~~~~~l~--~k~~~i~Gs~~  150 (168)
T d1uufa2          92 KSFDFILNTVAAPH----N-----------LD---DFTTL-LKRDGTMTLVGAPATPHKSPEVFNLI--MKRRAIAGSMI  150 (168)
T ss_dssp             TCEEEEEECCSSCC----C-----------HH---HHHTT-EEEEEEEEECCCC-------CHHHHH--TTTCEEEECCS
T ss_pred             CCCceeeeeeecch----h-----------HH---HHHHH-HhcCCEEEEeccCCCCcccccHHHHH--HCCcEEEEEee
Confidence            68999999876543    1           11   12223 3478898888765442221 111111  11224544   


Q ss_pred             echhHHHHHHHHHHH
Q psy9582         158 MLRLDHNRAIAKLAS  172 (329)
Q Consensus       158 ~t~lds~r~~~~la~  172 (329)
                      ++.-|..++..++++
T Consensus       151 ~~~~d~~e~l~l~a~  165 (168)
T d1uufa2         151 GGIPETQEMLDFCAE  165 (168)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHH
Confidence            345565555555554

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=95.95  E-value=0.0016  Score=56.52  Aligned_cols=120  Identities=13%  Similarity=0.108  Sum_probs=64.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC----CCCCCCC-CceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQ-PIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~-~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      .||.|.|| |..|..++..|+..    |+- .++ .-.++++|.+     ..+.....|+.....++..+..-..++.+.
T Consensus        26 ~kivi~GA-GaAg~gia~~l~~~~~~~G~~-~~~a~~~i~~vD~~-----Glv~~~r~d~~~~k~~~a~~~~~~~~l~~~   98 (308)
T d1o0sa1          26 EKYLFFGA-GAASTGIAEMIVHQMQNEGIS-KEEACNRIYLMDID-----GLVTKNRKEMNPRHVQFAKDMPETTSILEV   98 (308)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHHHTTTCC-HHHHHHTEEEEETT-----EECBTTCSSCCGGGTTTCBSSCCCCCHHHH
T ss_pred             cEEEEECc-CHHHHHHHHHHHHHHHhcCCc-hhhhhceEEEEeCC-----CCccCCCcccCHHHHHHHHhcccCCcHHHH
Confidence            58999999 99999988877643    331 111 1169999987     111111123322111232222222334444


Q ss_pred             cCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH---HHHHHHHC
Q psy9582          81 FKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN---TYITMKSA  147 (329)
Q Consensus        81 l~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~---~~~~~~~~  147 (329)
                      ++.+  +++|-+.+.+.-              ..+++.+.|.+.+ ++.+|+-.|||..-.   ..-+++.+
T Consensus        99 i~~~kptvliG~s~~~g~--------------ft~evv~~Ma~~~-~~PIIFaLSNPtp~~E~~~eda~~~t  155 (308)
T d1o0sa1          99 IRAARPGALIGASTVRGA--------------FNEEVIRAMAEIN-ERPIIFALSNPTSKAECTAEEAYTFT  155 (308)
T ss_dssp             HHHHCCSEEEECSSCTTC--------------SCHHHHHHHHHHC-SSCEEEECCSSGGGCSSCHHHHHHTT
T ss_pred             HhccccccEEecccccCC--------------CCHHHHHHHHhhC-CCcEEEEccCCCCCCCCCHHHHHhhc
Confidence            4433  455555444321              2244456677775 899999999998533   33344444

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.94  E-value=0.0058  Score=53.65  Aligned_cols=71  Identities=15%  Similarity=0.179  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ....++|||+ |..+...+..+....-+.     +|++|+++    .++.+..+.++++..      +....+..+++.+
T Consensus       124 ~~~~l~iiGa-G~QA~~~~~al~~~~~i~-----~i~v~~r~----~e~~~~~~~~~~~~~------~~~~~~~~~a~~~  187 (320)
T d1omoa_         124 NSSVFGFIGC-GTQAYFQLEALRRVFDIG-----EVKAYDVR----EKAAKKFVSYCEDRG------ISASVQPAEEASR  187 (320)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHSCCC-----EEEEECSS----HHHHHHHHHHHHHTT------CCEEECCHHHHTS
T ss_pred             CccEEEEecC-cccHHHHHHHHHHHhhhh-----hcccccCC----HHHHHHHHHHHHhcC------Cccccchhhhhcc
Confidence            3578999998 999988777766532244     99999998    666666666665432      2233345688999


Q ss_pred             ccEEEEe
Q psy9582          84 ANIAILI   90 (329)
Q Consensus        84 aDiVi~~   90 (329)
                      ||+|+.+
T Consensus       188 aDiV~ta  194 (320)
T d1omoa_         188 CDVLVTT  194 (320)
T ss_dssp             SSEEEEC
T ss_pred             ccEEEEe
Confidence            9999875

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.91  E-value=0.052  Score=40.61  Aligned_cols=25  Identities=20%  Similarity=0.359  Sum_probs=21.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDL   30 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (329)
                      |||+|.|++|.+|+.++..+...+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~   25 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH   25 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC
Confidence            6899999999999999887777665

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.89  E-value=0.019  Score=48.32  Aligned_cols=159  Identities=11%  Similarity=0.092  Sum_probs=82.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceE-------eec
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVS-------VHE   75 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~-------~~~   75 (329)
                      +.+.|+||++.+|.++|..|++.|.       +|++.+.+.   .+.++.....+.+.....   ..+++       .-.
T Consensus         7 K~alITGas~GIG~aia~~la~~G~-------~Vvi~~~~~---~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   76 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGA-------SVVVNYGSS---SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD   76 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEcCCC---hHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHH
Confidence            6788999999999999999999998       888866552   333443344443321100   00000       001


Q ss_pred             CcccccCCccEEEEeCCCCC-CCC--CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCC
Q psy9582          76 NPITAFKDANIAILIGSFPR-KSN--ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPD  149 (329)
Q Consensus        76 ~~~~al~~aDiVi~~~g~~~-~~g--~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~  149 (329)
                      ...+.+..-|++|..+|... .+-  .+   ....+..|+...-.+++...++...++.+++++......       . +
T Consensus        77 ~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~-------~-~  148 (259)
T d1ja9a_          77 KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM-------T-G  148 (259)
T ss_dssp             HHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC-------C-S
T ss_pred             HHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc-------c-C
Confidence            12234557899999888643 211  12   334556666655555554444443444554444322110       1 1


Q ss_pred             CCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582         150 LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV  184 (329)
Q Consensus       150 ~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~  184 (329)
                      +|..-..+.+----..+.+.+|..++  +..|+..
T Consensus       149 ~~~~~~Y~asK~al~~l~r~lA~e~~--~~gIrvN  181 (259)
T d1ja9a_         149 IPNHALYAGSKAAVEGFCRAFAVDCG--AKGVTVN  181 (259)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHh--hcCeEEe
Confidence            21110111121112356777888776  4556654

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.86  E-value=0.01  Score=46.67  Aligned_cols=76  Identities=12%  Similarity=0.123  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh-hhcccCCccceEeecCcccccC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI-EDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl-~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      +..||+++|-..+|..+++..+..-|.       ++.+.-...    -.......+. ..........+..+.+..++++
T Consensus         3 ~gl~Ia~VGD~~nv~~Sli~~l~~~g~-------~v~~~~P~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~   71 (163)
T d1pvva2           3 KGVKVVYVGDGNNVAHSLMIAGTKLGA-------DVVVATPEG----YEPDEKVIKWAEQNAAESGGSFELLHDPVKAVK   71 (163)
T ss_dssp             TTCEEEEESCCCHHHHHHHHHHHHTTC-------EEEEECCTT----CCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-------eEEEecccc----cCCChHHHHHHHHhhhcccceEEEecCHHHHhh
Confidence            357999999977888888888888776       899987651    1111111111 1110011246778889999999


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +||+|...
T Consensus        72 ~adviy~~   79 (163)
T d1pvva2          72 DADVIYTD   79 (163)
T ss_dssp             TCSEEEEC
T ss_pred             hccEEeec
Confidence            99998875

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.012  Score=46.14  Aligned_cols=102  Identities=13%  Similarity=0.109  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..++++|+|- |.+|..+|..+...|.       +|.++|++    +-+.      ++..+..    +.+ ....++++.
T Consensus        23 ~Gk~v~V~Gy-G~iG~g~A~~~rg~G~-------~V~v~e~d----p~~a------l~A~~dG----~~v-~~~~~a~~~   79 (163)
T d1li4a1          23 AGKVAVVAGY-GDVGKGCAQALRGFGA-------RVIITEID----PINA------LQAAMEG----YEV-TTMDEACQE   79 (163)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC----HHHH------HHHHHTT----CEE-CCHHHHTTT
T ss_pred             cCCEEEEecc-ccccHHHHHHHHhCCC-------eeEeeecc----cchh------HHhhcCc----eEe-eehhhhhhh
Confidence            4578999998 9999999999999987       89999999    3211      1211111    122 235789999


Q ss_pred             ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHHHHH
Q psy9582          84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYITMKS  146 (329)
Q Consensus        84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~~~~  146 (329)
                      +|+||.+.|...-  .+               .+.+++. ++.+++.+++ -...+-...+.+.
T Consensus        80 adivvtaTGn~~v--I~---------------~eh~~~M-KdgaIL~N~Ghfd~EId~~~L~~~  125 (163)
T d1li4a1          80 GNIFVTTTGCIDI--IL---------------GRHFEQM-KDDAIVCNIGHFDVEIDVKWLNEN  125 (163)
T ss_dssp             CSEEEECSSCSCS--BC---------------HHHHTTC-CTTEEEEECSSSTTSBCHHHHHHH
T ss_pred             ccEEEecCCCccc--hh---------------HHHHHhc-cCCeEEEEeccccceecHHHHhhc
Confidence            9999988665321  11               1445554 5788888886 3455544444443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.80  E-value=0.003  Score=53.25  Aligned_cols=35  Identities=14%  Similarity=0.248  Sum_probs=29.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.|.|+||++.+|..+|..|++.|..-     .|.+.+++
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~-----~Vi~~~R~   38 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIR-----HIIATARD   38 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCC-----EEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCC-----EEEEEeCC
Confidence            689999999999999999999987521     67888887

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.79  E-value=0.0086  Score=44.03  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.|++|+|| |.+|.-+|..|...|.       +|++++..
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~-------~Vtlve~~   53 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGA-------QVSVVEAR   53 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTC-------EEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhccc-------ceEEEeee
Confidence            3689999999 9999999999999887       99999986

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.78  E-value=0.025  Score=44.19  Aligned_cols=39  Identities=15%  Similarity=0.220  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      ..-+|.|+|+ |.+|...+..+...|.       +|..+|.+    +++++
T Consensus        26 ~g~~vlV~G~-G~vG~~~~~~ak~~Ga-------~vi~v~~~----~~r~~   64 (170)
T d1e3ja2          26 LGTTVLVIGA-GPIGLVSVLAAKAYGA-------FVVCTARS----PRRLE   64 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC----HHHHH
T ss_pred             CCCEEEEEcc-cccchhhHhhHhhhcc-------cccccchH----HHHHH
Confidence            3468999997 9999999888888886       89999998    55554

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.73  E-value=0.0072  Score=48.23  Aligned_cols=69  Identities=13%  Similarity=0.186  Sum_probs=42.3

Q ss_pred             CCCCCEEEEEcCCCchHHH-HHHHHHhC-CCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582           2 LKKPVRISITGAAGQIGYN-IIFRIANG-DLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI   78 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~-la~~l~~~-~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~   78 (329)
                      |+ ++||+|||+ |.+|.. ++..+... +.+      +|+ ++|.+    .++++....++.        .....++..
T Consensus         1 Mk-kirigiIG~-G~~g~~~h~~~l~~~~~~~------~i~~v~d~~----~~~~~~~~~~~~--------~~~~~~~~~   60 (181)
T d1zh8a1           1 LR-KIRLGIVGC-GIAARELHLPALKNLSHLF------EITAVTSRT----RSHAEEFAKMVG--------NPAVFDSYE   60 (181)
T ss_dssp             CC-CEEEEEECC-SHHHHHTHHHHHHTTTTTE------EEEEEECSS----HHHHHHHHHHHS--------SCEEESCHH
T ss_pred             CC-CcEEEEEcC-CHHHHHHHHHHHHhCCCCe------EEEEEEecc----Hhhhhhhhcccc--------ccceeeeee
Confidence            44 489999998 999986 56666653 322      554 78888    444442222221        123445655


Q ss_pred             cccC--CccEEEEe
Q psy9582          79 TAFK--DANIAILI   90 (329)
Q Consensus        79 ~al~--~aDiVi~~   90 (329)
                      +.++  +.|+|+++
T Consensus        61 ell~~~~id~v~I~   74 (181)
T d1zh8a1          61 ELLESGLVDAVDLT   74 (181)
T ss_dssp             HHHHSSCCSEEEEC
T ss_pred             ccccccccceeecc
Confidence            6554  67889987

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.018  Score=45.99  Aligned_cols=76  Identities=12%  Similarity=0.105  Sum_probs=49.2

Q ss_pred             CCEEEEEcC-CCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           5 PVRISITGA-AGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         5 ~~kI~IiGa-~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..||+++|= ..+|..+++..+..-|.       +|+++-..+   -..-.......+.........+.++.+..+++++
T Consensus         5 ~l~i~~vGD~~nnv~~Sli~~~~~~g~-------~l~~~~P~~---~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~   74 (183)
T d1duvg2           5 EMTLVYAGDARNNMGNSMLEAAALTGL-------DLRLVAPQA---CWPEAALVTECRALAQQNGGNITLTEDVAKGVEG   74 (183)
T ss_dssp             GCEEEEESCTTSHHHHHHHHHHHHHCC-------EEEEECCGG---GCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTT
T ss_pred             CCEEEEEcCCccHHHHHHHHHHHHcCC-------EEEEEechH---hhhhHHHHHHHHHHHHhcCCceEEEechhhcccc
Confidence            479999994 13688888888877776       899997651   1111111111221111122467888899999999


Q ss_pred             ccEEEEe
Q psy9582          84 ANIAILI   90 (329)
Q Consensus        84 aDiVi~~   90 (329)
                      +|+|...
T Consensus        75 aDvvyt~   81 (183)
T d1duvg2          75 ADFIYTD   81 (183)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEE
Confidence            9999876

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0028  Score=54.81  Aligned_cols=121  Identities=16%  Similarity=0.166  Sum_probs=66.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC----CCCCCCC-CceEEEEecCCcccccchhhhHhhhhhcccCCccc--eEeecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQ-PIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVD--VSVHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~-~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~--i~~~~~~~   78 (329)
                      .||.+.|| |..|..++..|...    |+. .++ .-.|+++|.+  .  -..++..-++.....++...  -....++.
T Consensus        26 ~kiv~~GA-GsAg~gia~ll~~~~~~~g~~-~~~a~~~i~lvD~~--G--lv~~~r~~~~~~~k~~~a~~~~~~~~~~L~   99 (294)
T d1pj3a1          26 HKILFLGA-GEAALGIANLIVMSMVENGLS-EQEAQKKIWMFDKY--G--LLVKGRKAKIDSYQEPFTHSAPESIPDTFE   99 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHHHHTTCC-HHHHHHTEEEEETT--E--ECBTTCSSCCCTTTGGGCBCCCSSCCSSHH
T ss_pred             cEEEEECc-cHHHHHHHHHHHHHHHhcCCc-hhhccccEEEEeCC--C--CccCCCCcccHHHHHHhhccccccchhHHH
Confidence            68999999 99999988876543    331 010 0169999996  1  00011000111000011110  01113456


Q ss_pred             cccC--CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh---HHHHHHHHC
Q psy9582          79 TAFK--DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT---NTYITMKSA  147 (329)
Q Consensus        79 ~al~--~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~---~~~~~~~~~  147 (329)
                      ++++  +.|++|-+.+.+.-              ..+++.+.|.+.+ ++.+|+-.|||..-   ...-+++.+
T Consensus       100 e~i~~~kptvliG~S~~~g~--------------ft~evi~~Ma~~~-~~PIIFaLSNPt~~~e~~~~~a~~~t  158 (294)
T d1pj3a1         100 DAVNILKPSTIIGVAGAGRL--------------FTPDVIRAMASIN-ERPVIFALSNPTAQAECTAEEAYTLT  158 (294)
T ss_dssp             HHHHHHCCSEEEECCCSSCC--------------SCHHHHHHHHHHC-SSCEEEECCSSGGGCSCCHHHHHHHT
T ss_pred             HHHHhcCCceEEEecCCCCc--------------CCHHHHHHHHhcC-CCcEEEEccCCCCcCCcCHHHHHhhc
Confidence            6654  77887776554321              2345556666775 89999999999753   344455655

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.16  Score=43.02  Aligned_cols=115  Identities=13%  Similarity=0.103  Sum_probs=60.0

Q ss_pred             CEEEE-EcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC--cccccchhhhHhhhhhcccCCccceE-eecCc----
Q psy9582           6 VRISI-TGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVS-VHENP----   77 (329)
Q Consensus         6 ~kI~I-iGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~-~~~~~----   77 (329)
                      +||++ +||++++|.++|..|++.|.       .+++++...  .+..+++...+..+....    .++. +..|.    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga-------~v~~v~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~Dv~~~~   70 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP----GSLETLQLDVRDSK   70 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-------CCEEEEEEESCGGGTHHHHHHHHHTTCCT----TSEEEEECCTTCHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCC-------CeEEEEEecCChhhhHHHHHHHHHHhccC----CceEEEeccccchH
Confidence            57875 59999999999999999886       455554320  000111221112221111    0111 01110    


Q ss_pred             -----ccc--cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          78 -----ITA--FKDANIAILIGSFPRKSN---ME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        78 -----~~a--l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                           .+.  -...|+++..+|......   .+   ....+..|+.    .++.+.+.|.+.  ..+.||+++
T Consensus        71 ~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~--~~G~Iv~is  141 (285)
T d1jtva_          71 SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR--GSGRVLVTG  141 (285)
T ss_dssp             HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEE
T ss_pred             hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc--CCCceEEEe
Confidence                 011  146799999887643221   12   3344555544    566677778775  356666665

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.63  E-value=0.024  Score=47.45  Aligned_cols=152  Identities=15%  Similarity=0.096  Sum_probs=84.5

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--------
Q psy9582           4 KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--------   73 (329)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--------   73 (329)
                      +.+++.|+||+|  .+|.++|..|++.|.       +|++.|++    ++..+ .+.++........ .+..        
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-------~V~i~~~~----~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~   70 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQN----DKLKG-RVEEFAAQLGSDI-VLQCDVAEDASI   70 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-------EEEEEESS----TTTHH-HHHHHHHHTTCCC-EEECCTTCHHHH
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-------EEEEEeCC----HHHHH-HHHHHHhhcCCcc-eeecccchHHHH
Confidence            347899999977  688999999999998       99999998    33222 2222222110000 0000        


Q ss_pred             ---ecCcccccCCccEEEEeCCCCCCCC--------CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch---
Q psy9582          74 ---HENPITAFKDANIAILIGSFPRKSN--------ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV---  136 (329)
Q Consensus        74 ---~~~~~~al~~aDiVi~~~g~~~~~g--------~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~---  136 (329)
                         .....+.....|++|..++......        ..   ....+.-|......+.+.+..+.++...++++|-..   
T Consensus        71 ~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~  150 (258)
T d1qsga_          71 DTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER  150 (258)
T ss_dssp             HHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS
T ss_pred             HHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc
Confidence               0112233456688888766532111        01   112334455566666666666654555666666433   


Q ss_pred             ---hhHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEE
Q psy9582         137 ---NTNTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVF  185 (329)
Q Consensus       137 ---~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~  185 (329)
                         ...+|.++|..               -..+.+.+|..++  ++.|+...
T Consensus       151 ~~~~~~~Y~~sKaa---------------l~~ltr~lA~el~--~~gIrVN~  185 (258)
T d1qsga_         151 AIPNYNVMGLAKAS---------------LEANVRYMANAMG--PEGVRVNA  185 (258)
T ss_dssp             BCTTTTHHHHHHHH---------------HHHHHHHHHHHHT--TTTEEEEE
T ss_pred             CCCCcHHHHHHHHH---------------HHHHHHHHHHHhC--ccCceeec
Confidence               12223333321               2457788888887  67788653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.026  Score=44.22  Aligned_cols=40  Identities=15%  Similarity=0.201  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      +.-+|+|+|+ |.+|...+..+...|.-      .|...|.+    +++++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~------~Vi~~d~~----~~rl~   65 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAA------QVVVTDLS----ATRLS   65 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEEESC----HHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCc------eEEeccCC----HHHHH
Confidence            3468999998 99999988888877752      79999999    55554

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.58  E-value=0.0048  Score=52.85  Aligned_cols=34  Identities=32%  Similarity=0.534  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++||+|||| |..|.+.|..|.+.|+       +|+|+|.+
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~-------~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGH-------QVTVLEAS   62 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTC-------EEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-------CEEEEeCC
Confidence            4689999999 9999999999999998       89999976

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.47  E-value=0.0076  Score=52.72  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |.+.+||+|||| |..|.+.|..|++.+...     +|++++.+
T Consensus         1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~-----~v~vfEk~   38 (335)
T d2gv8a1           1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFD-----QVTLFERR   38 (335)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHTTTCCS-----EEEEECSS
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHhCCCC-----CEEEEECC
Confidence            566679999999 999999999998776543     89999998

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=95.43  E-value=0.0036  Score=54.08  Aligned_cols=120  Identities=11%  Similarity=0.089  Sum_probs=63.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC----CCCCCCCC-ceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQP-IILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~~-~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      .||+|.|| |..|..++..|+..    |+- .++. -.++++|.+     ..+.....|+.+...++.....-..++.+.
T Consensus        26 ~kiV~~GA-GsAg~gia~~l~~~~~~~G~~-~~~a~~~i~l~D~k-----Glv~~~R~~l~~~k~~~a~~~~~~~~l~~~   98 (298)
T d1gq2a1          26 HTVLFQGA-GEAALGIANLIVMAMQKEGVS-KEEAIKRIWMVDSK-----GLIVKGRASLTPEKEHFAHEHCEMKNLEDI   98 (298)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHHHHHTCC-HHHHHTTEEEEETT-----EECBTTCSSCCTTGGGGCBSCCCCCCHHHH
T ss_pred             cEEEEECc-cHHHHHHHHHHHHHHHHcCCC-hhhccceEEEEeCC-----CcccCCCcccCHHHHHHHHHhhhhhhhHHH
Confidence            68999999 99999988877532    431 1110 179999987     111111112221111121111111233333


Q ss_pred             cC--CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582          81 FK--DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA  147 (329)
Q Consensus        81 l~--~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~  147 (329)
                      ++  +.+++|-+.+.+.              -..+++.+.|...+ ++.+|+-.|||..   ....-+++.+
T Consensus        99 i~~vkptvliG~s~~~g--------------~ft~evv~~ma~~~-~~PIIFaLSNPt~~~E~~~~~a~~wt  155 (298)
T d1gq2a1          99 VKDIKPTVLIGVAAIGG--------------AFTQQILQDMAAFN-KRPIIFALSNPTSKAECTAEQLYKYT  155 (298)
T ss_dssp             HHHHCCSEEEECSCCTT--------------CSCHHHHHHHHHHC-SSCEEEECCSSGGGCSSCHHHHHHHT
T ss_pred             hhccChheeEecccccC--------------cCCHHHHHHHHhhC-CCCEEEEccCCCCcCCCCHHHHhhhc
Confidence            33  2556666544432              12234455666675 8899999999975   3333455555

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.40  E-value=0.0078  Score=50.13  Aligned_cols=34  Identities=18%  Similarity=0.320  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ...||+|||| |..|.++|..|.+.|+       +++++|.+
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~-------~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGV-------DVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCC-------CEEEEeCC
Confidence            3579999999 9999999999999998       99999986

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.40  E-value=0.025  Score=41.71  Aligned_cols=34  Identities=29%  Similarity=0.345  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.||+|||| |.+|.-+|..|...|.       +|+++...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~-------~Vtiv~~~   54 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGA-------EVTVLEAM   54 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCC-------ceEEEEee
Confidence            3689999999 9999999999999887       99999977

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.012  Score=49.29  Aligned_cols=46  Identities=17%  Similarity=0.182  Sum_probs=37.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE   61 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~   61 (329)
                      .+.+.|+||++.+|.+++..|++.|.       +|++.|++    .+.++....++.
T Consensus         5 GKvalITGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~l~   50 (248)
T d2o23a1           5 GLVAVITGGASGLGLATAERLVGQGA-------SAVLLDLP----NSGGEAQAKKLG   50 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECT----TSSHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHhC
Confidence            45667999999999999999999998       89999999    555665555553

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.011  Score=47.26  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+++||+|||| |..|...|..|.+.|+       +|+|+|.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~-------~Vtl~E~~   75 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH-------QVTLFDAH   75 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEEESS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc-------ceEEEecc
Confidence            35689999999 9999999999999998       99999987

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.25  E-value=0.0072  Score=48.13  Aligned_cols=34  Identities=18%  Similarity=0.231  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.||+|||| |..|...|..|.+.|+-      +|+++|..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~------~V~v~E~~   37 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYS------DITIFEKQ   37 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCC------CEEEEESS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCC------eEEEEEec
Confidence            579999999 99999999999999872      59999987

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.24  E-value=0.0067  Score=51.07  Aligned_cols=36  Identities=25%  Similarity=0.431  Sum_probs=32.4

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |++...|+|||| |-+|.++|+.|++.|.       +|+++|.+
T Consensus         1 m~~~~DvvIIGa-Gi~Gls~A~~La~~G~-------~V~vlE~~   36 (276)
T d1ryia1           1 MKRHYEAVVIGG-GIIGSAIAYYLAKENK-------NTALFESG   36 (276)
T ss_dssp             CCSEEEEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CCccCCEEEECc-CHHHHHHHHHHHHCCC-------cEEEEeCC
Confidence            665567999999 9999999999999987       89999987

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.22  E-value=0.055  Score=37.77  Aligned_cols=70  Identities=11%  Similarity=0.128  Sum_probs=49.0

Q ss_pred             CEEEEEcCCCchHH-HHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           6 VRISITGAAGQIGY-NIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         6 ~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      |||=+||- |.+|. ++|..|.+.|+       .|.-.|+.+    ..   ....|++...    .+... ...+.++++
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~-------~VsGSD~~~----~~---~t~~L~~~Gi----~i~~g-h~~~~i~~~   61 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGN-------DVYGSNIEE----TE---RTAYLRKLGI----PIFVP-HSADNWYDP   61 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTC-------EEEEECSSC----CH---HHHHHHHTTC----CEESS-CCTTSCCCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCC-------eEEEEeCCC----Ch---hHHHHHHCCC----eEEee-ecccccCCC
Confidence            68999999 88886 68999999998       899999882    11   2223444321    22222 234668899


Q ss_pred             cEEEEeCCCCC
Q psy9582          85 NIAILIGSFPR   95 (329)
Q Consensus        85 DiVi~~~g~~~   95 (329)
                      |+||.+.+.+.
T Consensus        62 d~vV~SsAI~~   72 (89)
T d1j6ua1          62 DLVIKTPAVRD   72 (89)
T ss_dssp             SEEEECTTCCT
T ss_pred             CEEEEecCcCC
Confidence            99999887764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.19  E-value=0.013  Score=46.37  Aligned_cols=40  Identities=10%  Similarity=0.037  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      +.-+|+|+|+ |.+|...+..+...|..      .|...|.+    +++++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~------~Vi~~d~~----~~r~~   66 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAG------RIIGVGSR----PICVE   66 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCS------CEEEECCC----HHHHH
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhccccc------ccccccch----hhhHH
Confidence            3468999998 99999888877766652      69999998    55544

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.18  E-value=0.22  Score=37.59  Aligned_cols=114  Identities=11%  Similarity=0.033  Sum_probs=65.9

Q ss_pred             CCEEEEEcCC---CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           5 PVRISITGAA---GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         5 ~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      +++|+|||||   +..|..++..|...|+       +|+.+..+    .+...|               ..+..++.+.-
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~-------~v~pVnP~----~~~i~G---------------~~~~~sl~dlp   72 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGY-------DVYPVNPK----YEEVLG---------------RKCYPSVLDIP   72 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTC-------EEEEECTT----CSEETT---------------EECBSSGGGCS
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCC-------EEEEECCc----ccccCC---------------CcccccccccC
Confidence            5789999997   5789999999999887       89988776    222222               11222333333


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-c-
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-L-  159 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t-  159 (329)
                      ..-|+|++..                ..+.+.++.+++.+.. ..++++..+.-.+.....+. .. |+   ++++- | 
T Consensus        73 ~~iD~v~i~v----------------p~~~~~~~~~e~~~~g-~k~v~~~~G~~~ee~~~~a~-~~-gi---~vig~~C~  130 (139)
T d2d59a1          73 DKIEVVDLFV----------------KPKLTMEYVEQAIKKG-AKVVWFQYNTYNREASKKAD-EA-GL---IIVANRCM  130 (139)
T ss_dssp             SCCSEEEECS----------------CHHHHHHHHHHHHHHT-CSEEEECTTCCCHHHHHHHH-HT-TC---EEEESCCH
T ss_pred             ccceEEEEEe----------------CHHHHHHHHHHHHHhC-CCEEEEeccccCHHHHHHHH-HC-CC---EEEcCCcC
Confidence            3578888862                1245666666666664 66554444433334444333 33 44   34442 4 


Q ss_pred             hhHHHHH
Q psy9582         160 RLDHNRA  166 (329)
Q Consensus       160 ~lds~r~  166 (329)
                      +.+..|+
T Consensus       131 ~v~~~rl  137 (139)
T d2d59a1         131 MREHERL  137 (139)
T ss_dssp             HHHHHHH
T ss_pred             hhhhhhh
Confidence            4454444

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.16  E-value=0.017  Score=42.41  Aligned_cols=34  Identities=26%  Similarity=0.368  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+|+|||| |.+|.-+|..|...|.       +|++++..
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~-------~Vtlve~~   54 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGT-------KVTILEGA   54 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             cCCeEEEECC-Cccceeeeeeeccccc-------EEEEEEec
Confidence            4689999999 9999999999999987       99999987

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.05  E-value=0.01  Score=49.63  Aligned_cols=33  Identities=24%  Similarity=0.467  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+||+|||| |..|.+.|..|.+.|+       +|+++|.+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~-------~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGL-------NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSC-------EEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-------CEEEEeCC
Confidence            368999999 9999999999999998       89999976

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.02  E-value=0.019  Score=42.58  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++.+|+|||| |.+|.-+|..|...|.       +|++++..
T Consensus        28 ~~~~~vvIIGg-G~iG~E~A~~l~~~g~-------~Vtli~~~   62 (121)
T d1d7ya2          28 RPQSRLLIVGG-GVIGLELAATARTAGV-------HVSLVETQ   62 (121)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             hcCCeEEEECc-chhHHHHHHHhhcccc-------eEEEEeec
Confidence            34579999999 9999999999999987       99999987

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.02  Score=42.10  Aligned_cols=34  Identities=29%  Similarity=0.330  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.||+|||| |.+|.-+|..|...|.       +|++++..
T Consensus        20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~-------~Vtlve~~   53 (116)
T d1gesa2          20 LPERVAVVGA-GYIGVELGGVINGLGA-------KTHLFEMF   53 (116)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCCEEEEECC-ChhhHHHHHHhhcccc-------EEEEEeec
Confidence            3689999999 9999999999999887       99999997

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.92  E-value=0.0085  Score=50.16  Aligned_cols=32  Identities=22%  Similarity=0.393  Sum_probs=29.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |||+|||| |..|.+.|..|.+.|+       +|+|++.+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~-------~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT-------DAVLLESS   32 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC-------CEEEECSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC-------CEEEEecC
Confidence            68999999 9999999999999997       89999976

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.91  E-value=0.019  Score=42.67  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.|++|||| |.+|.-+|..|...|.       +|++++..
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~-------~Vtii~~~   55 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGS-------KVTVVEFQ   55 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCc-------ceeEEEec
Confidence            4689999999 9999999999999887       99999987

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.86  E-value=0.014  Score=50.89  Aligned_cols=34  Identities=26%  Similarity=0.334  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +++||+|||| |-.|.+.|..|.+.|.       +|.+++.+
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~-------~V~viEk~   34 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGH-------QVHIIDQR   34 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTC-------EEEEEESS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCC-------CEEEEECC
Confidence            3579999999 9999999999999887       89999987

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.037  Score=43.64  Aligned_cols=35  Identities=6%  Similarity=0.018  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..++|+|||.|.-+|..++..|.+.+.       .+.+++..
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~ga-------tVt~~~~~   72 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNA-------TVTTCHSK   72 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTC-------EEEEECTT
T ss_pred             ccceEEEEecCCccchHHHHHHHhccC-------ceEEEecc
Confidence            357999999988899999999999886       89999887

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=94.75  E-value=0.061  Score=42.39  Aligned_cols=44  Identities=20%  Similarity=0.220  Sum_probs=33.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI   60 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl   60 (329)
                      .-+|.|+|| |.+|...+..+...|.-      .|..+|.+    +++++ .+.++
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~------~Vi~~~~~----~~~~~-~a~~l   72 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAE------NVIVIAGS----PNRLK-LAEEI   72 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBS------EEEEEESC----HHHHH-HHHHT
T ss_pred             CCEEEEECC-Cccchhheecccccccc------cccccccc----ccccc-ccccc
Confidence            468999998 99999888888777752      69999998    55554 33443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.67  E-value=0.023  Score=42.80  Aligned_cols=35  Identities=20%  Similarity=0.416  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+.+|+|||| |.+|.-+|..|...|.       +|++++..
T Consensus        33 ~~~k~v~VIGg-G~iG~E~A~~l~~~g~-------~Vtvie~~   67 (133)
T d1q1ra2          33 IADNRLVVIGG-GYIGLEVAATAIKANM-------HVTLLDTA   67 (133)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             ccCCEEEEECC-chHHHHHHHHHHhhCc-------ceeeeeec
Confidence            45689999999 9999999999999987       99999987

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=94.63  E-value=0.059  Score=44.26  Aligned_cols=105  Identities=17%  Similarity=0.293  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCC----cccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASN----KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~----~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      ..||.+.|| |..|..++..|...+.-      +++++|.+-    +.....+.....++.+..    .......++.++
T Consensus        26 d~riv~~GA-GsAg~gia~~l~~~~~~------~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~----~~~~~~~~l~~~   94 (222)
T d1vl6a1          26 EVKVVVNGI-GAAGYNIVKFLLDLGVK------NVVAVDRKGILNENDPETCLNEYHLEIARIT----NPERLSGDLETA   94 (222)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCC------EEEEEETTEECCTTSGGGCSSHHHHHHHHTS----CTTCCCSCHHHH
T ss_pred             hcEEEEECh-HHHHHHHHHHHHHhccc------ceEeecceeEEEcCcccccccHHHHHHHhhh----cchhhhcchHhh
Confidence            369999999 99999999999887652      899999871    110111222222222211    011123456789


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN  139 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~  139 (329)
                      ++++++++-+..    ++.-..              +.|++.+ ++.+|+-.|||..-.
T Consensus        95 l~g~~~~~g~~~----~~~~~~--------------e~m~~~~-~rPIIFpLSNPt~~~  134 (222)
T d1vl6a1          95 LEGADFFIGVSR----GNILKP--------------EWIKKMS-RKPVIFALANPVPEI  134 (222)
T ss_dssp             HTTCSEEEECSC----SSCSCH--------------HHHTTSC-SSCEEEECCSSSCSS
T ss_pred             ccCcceeccccc----cccccH--------------HHHhhcC-CCCEEEecCCCccch
Confidence            999998776532    221111              2455665 788999999997543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.53  E-value=0.13  Score=42.45  Aligned_cols=32  Identities=19%  Similarity=0.148  Sum_probs=29.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -|.|+||++.+|.++|..|++.|.       +|++.|++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-------~V~~~~~~   34 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-------QIVGIDIR   34 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC
Confidence            357889999999999999999998       89999998

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.51  E-value=0.027  Score=41.83  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +..+|+|||| |.+|.-+|..|...|.       +|++++..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~-------~Vtlie~~   62 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGK-------KVTVIDIL   62 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccce-------EEEEEEec
Confidence            3579999999 9999999999999987       99999987

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.51  E-value=0.035  Score=40.50  Aligned_cols=33  Identities=12%  Similarity=0.311  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||+|+|+ |..|.-++......|+       ++.++|.+
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~-------~v~v~d~~   43 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGV-------EVIAVDRY   43 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTC-------EEEEEESS
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCC-------EEEEEcCC
Confidence            379999998 9999999999888888       99999998

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.45  E-value=0.046  Score=42.60  Aligned_cols=92  Identities=15%  Similarity=0.078  Sum_probs=63.0

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      |-..++++|+|= |.+|..+|..+...|.       .|.+++++    +  +.+    |+..+..    +++ ....+++
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga-------~V~V~E~D----P--i~a----lqA~mdG----f~v-~~~~~a~   76 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGA-------RVYITEID----P--ICA----IQAVMEG----FNV-VTLDEIV   76 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTC-------EEEEECSC----H--HHH----HHHHTTT----CEE-CCHHHHT
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCC-------EEEEEecC----c--hhh----HHHHhcC----Ccc-CchhHcc
Confidence            334579999999 9999999999999887       89999999    2  121    2222211    233 3467999


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN  134 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN  134 (329)
                      +.+|++|.+.|...-              +-   .+.+++. +.++++.+++-
T Consensus        77 ~~aDi~vTaTGn~~v--------------I~---~~h~~~M-KdgaIl~N~GH  111 (163)
T d1v8ba1          77 DKGDFFITCTGNVDV--------------IK---LEHLLKM-KNNAVVGNIGH  111 (163)
T ss_dssp             TTCSEEEECCSSSSS--------------BC---HHHHTTC-CTTCEEEECSS
T ss_pred             ccCcEEEEcCCCCcc--------------cc---HHHHHHh-hCCeEEEeccc
Confidence            999999998665431              11   1344443 46788888874

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.028  Score=44.14  Aligned_cols=57  Identities=14%  Similarity=0.153  Sum_probs=42.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      ..++|+|||.|.-+|..++..|.+.+.       .|...+..    ..                        ++.+-+++
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~ga-------tVt~~h~~----t~------------------------~l~~~~~~   80 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGC-------TTTVTHRF----TK------------------------NLRHHVEN   80 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTC-------EEEEECSS----CS------------------------CHHHHHHH
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhc-------cccccccc----cc------------------------hhHHHHhh
Confidence            357999999988899999999998886       78888776    21                        12344567


Q ss_pred             ccEEEEeCCCCC
Q psy9582          84 ANIAILIGSFPR   95 (329)
Q Consensus        84 aDiVi~~~g~~~   95 (329)
                      ||+||.+.|.|.
T Consensus        81 ADivI~a~G~p~   92 (166)
T d1b0aa1          81 ADLLIVAVGKPG   92 (166)
T ss_dssp             CSEEEECSCCTT
T ss_pred             hhHhhhhccCcc
Confidence            888888777654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.36  E-value=0.022  Score=47.38  Aligned_cols=34  Identities=32%  Similarity=0.485  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |+||+|||| |..|.++|..|.+.|+.      .|.+++..
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~------~V~V~Er~   34 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIG------KVTLLESS   34 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCC------eEEEEeCC
Confidence            589999999 99999999999999853      78999987

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.32  E-value=0.008  Score=47.69  Aligned_cols=79  Identities=13%  Similarity=0.115  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-e-cCcccccC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-H-ENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~-~~~~~al~   82 (329)
                      .++++|||.|.-+|..+|..|++.+.       .+.+.|.+..  ..........+.+..   ..++.. + ..+.+...
T Consensus        29 GK~vvVIGrS~iVG~Pla~lL~~~ga-------TVt~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~lk~~~~   96 (171)
T d1edza1          29 GKKCIVINRSEIVGRPLAALLANDGA-------TVYSVDVNNI--QKFTRGESLKLNKHH---VEDLGEYSEDLLKKCSL   96 (171)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSC-------EEEEECSSEE--EEEESCCCSSCCCCE---EEEEEECCHHHHHHHHH
T ss_pred             CCEEEEECCccccHHHHHHHHHHCCC-------EEEEeccccc--cccccccceeeeeec---cccccccchhHHhhccc
Confidence            47999999977889999999998876       8999988710  111111111111110   011111 1 12456677


Q ss_pred             CccEEEEeCCCCC
Q psy9582          83 DANIAILIGSFPR   95 (329)
Q Consensus        83 ~aDiVi~~~g~~~   95 (329)
                      .||+||...|.|.
T Consensus        97 ~aDIvIsavG~p~  109 (171)
T d1edza1          97 DSDVVITGVPSEN  109 (171)
T ss_dssp             HCSEEEECCCCTT
T ss_pred             cCCEEEEccCCCc
Confidence            8999999888764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.32  E-value=0.018  Score=48.18  Aligned_cols=33  Identities=30%  Similarity=0.471  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|+|+ |.+|+.++..|+..|+ +     +|+|+|-+
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gv-g-----~i~lvD~D   63 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGV-G-----NLTLLDFD   63 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-S-----EEEEECCC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEECCc
Confidence            69999998 9999999999999997 3     89999988

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.30  E-value=0.016  Score=45.21  Aligned_cols=40  Identities=13%  Similarity=0.233  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      ++..+|.|+|+ |.+|...+..+...|.       +|..+|.+    +++++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~-------~Vi~~~~~----~~~~~   65 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGL-------HVAAIDID----DAKLE   65 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEEESC----HHHHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCC-------ccceecch----hhHHH
Confidence            34578999998 9999998888887775       89999998    55543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.15  E-value=0.35  Score=39.90  Aligned_cols=120  Identities=11%  Similarity=0.052  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEee---cCcc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVH---ENPI   78 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~---~~~~   78 (329)
                      ...+.|+||+|.+|..++..|++.|.-      .|+|+.++.. +.+.+.....++........   .+++-.   ....
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~------~vvl~~R~~~-~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~   81 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAP------HLLLVSRSGP-DADGAGELVAELEALGARTTVAACDVTDRESVRELL   81 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCS------EEEEEESSGG-GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCC------EEEEEeCCcc-CHHHHHHHHHHHHhccccccccccccchHHHHHHhh
Confidence            357999999999999999999998862      5888877521 12233333334432210000   000000   0011


Q ss_pred             ccc---CCccEEEEeCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582          79 TAF---KDANIAILIGSFPRKSN---MER---SELLAINSSIFIEQGKALNSVASRDVKVLVVG  133 (329)
Q Consensus        79 ~al---~~aDiVi~~~g~~~~~g---~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t  133 (329)
                      +.+   ...|.||+.+|......   ++.   ...+..|+.....+.+.+...  +.+.++++|
T Consensus        82 ~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~--~~~~iv~~S  143 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFS  143 (259)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEE
T ss_pred             ccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc--CCceEeeec
Confidence            112   25788898887654321   222   233456777777777766654  344555555

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.14  E-value=0.51  Score=38.72  Aligned_cols=31  Identities=26%  Similarity=0.325  Sum_probs=29.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..|+||++.+|.++|..|++.|.       +|++.|++
T Consensus         4 AlVTGas~GIG~aia~~la~~G~-------~Vvi~~r~   34 (266)
T d1mxha_           4 AVITGGARRIGHSIAVRLHQQGF-------RVVVHYRH   34 (266)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC
Confidence            46899999999999999999998       99999998

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.09  E-value=0.033  Score=41.42  Aligned_cols=33  Identities=24%  Similarity=0.202  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++|||| |.+|.-+|..|...|.       +|++++..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~-------~Vtlv~~~   54 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGS-------KTSLMIRH   54 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCc-------EEEEEeec
Confidence            579999999 9999999999999887       99999997

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.06  E-value=0.23  Score=36.88  Aligned_cols=36  Identities=19%  Similarity=0.418  Sum_probs=28.3

Q ss_pred             CCCEEEEEcCC---CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAA---GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++++|+|||||   ++.|..+...|...+ -+     +|+.+...
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g-----~v~pVnP~   45 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KG-----KVYPVNIK   45 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SS-----EEEEECSS
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcC-CC-----cEEEeccC
Confidence            46899999998   788888888876654 33     88888776

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.02  E-value=0.017  Score=49.00  Aligned_cols=32  Identities=22%  Similarity=0.290  Sum_probs=29.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|||| |..|.++|..|.+.|+       ++.++|..
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~-------~v~vlE~~   34 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGI-------DNVILERQ   34 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTC-------CEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC-------CEEEEeCC
Confidence            47999999 9999999999999998       89999987

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.01  E-value=0.076  Score=40.50  Aligned_cols=33  Identities=21%  Similarity=0.482  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|.|||| |.+|..-+..|+..|.       +|++++..
T Consensus        13 gkrvLViGg-G~va~~ka~~Ll~~GA-------~VtVvap~   45 (150)
T d1kyqa1          13 DKRILLIGG-GEVGLTRLYKLMPTGC-------KLTLVSPD   45 (150)
T ss_dssp             TCEEEEEEE-SHHHHHHHHHHGGGTC-------EEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            479999999 9999999999999987       89999654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.00  E-value=0.064  Score=44.54  Aligned_cols=38  Identities=21%  Similarity=0.203  Sum_probs=31.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh---CCCCCCCCCceEEEEecCCcccccchh
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN---GDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~---~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      ++|.|+||++.+|..+|..|+.   .|.       .|++.+++    +++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-------~V~~~~r~----~~~~~   43 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-------HLFTTCRN----REQAK   43 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-------EEEEEESC----TTSCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-------EEEEEECC----HHHHH
Confidence            3599999999999999998874   454       89999998    45554

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.027  Score=47.63  Aligned_cols=35  Identities=29%  Similarity=0.359  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++..||+|||| |--|.+.|..|.+.|+       +|.+++.+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~-------~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGM-------DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCC-------CEEEEeCC
Confidence            35679999999 9999999999999998       89999876

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.96  E-value=0.027  Score=45.00  Aligned_cols=34  Identities=18%  Similarity=0.272  Sum_probs=28.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |||+|||| |.+|..+|..|...+.-.     +|++++.+
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~-----~V~v~~~~   34 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDA-----EIQWYEKG   34 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTS-----EEEEEESS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCC-----eEEEEeCC
Confidence            68999999 999999999998754322     89999876

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.92  E-value=0.035  Score=41.14  Aligned_cols=34  Identities=18%  Similarity=0.139  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+++|||| |.+|.-+|..|...|.       +|+++..+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~-------~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGL-------DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCC-------eEEEEEec
Confidence            4679999999 9999999999999887       89999765

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.91  E-value=0.029  Score=43.38  Aligned_cols=35  Identities=23%  Similarity=0.266  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+||+|||| |.+|..+|..|...+.-     .+|+|+|.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~-----~~Vtlie~~   36 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPS-----IEVTLIEPN   36 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTT-----SEEEEECSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCC-----CcEEEEECC
Confidence            369999999 99999999999876531     289999987

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.80  E-value=0.018  Score=47.07  Aligned_cols=41  Identities=20%  Similarity=0.319  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++.||+|||| |.-|.+.|..|.+.|+-......+|+++|..
T Consensus         1 rp~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~   41 (239)
T d1lqta2           1 RPYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEML   41 (239)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESS
T ss_pred             CCcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecC
Confidence            4679999998 9999999999998764110011379999987

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.73  E-value=0.03  Score=46.03  Aligned_cols=33  Identities=15%  Similarity=0.231  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+.|+||++.+|.++|..|++.|.       +|++.|++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-------~V~i~~~~   34 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-------RVVVLDLR   34 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC
Confidence            4678899999999999999999998       89999998

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=93.72  E-value=0.3  Score=41.09  Aligned_cols=35  Identities=17%  Similarity=0.158  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+++.|+||+|  .+|..+|..|++.|.       +|++.+++
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-------~Vvi~~~~   43 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-------EILVGTWV   43 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-------EEEEEEEH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-------EEEEEeCc
Confidence            457899999976  799999999999998       89999886

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.67  E-value=0.026  Score=45.76  Aligned_cols=33  Identities=30%  Similarity=0.471  Sum_probs=29.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|||| |..|.+.|..|.+.|+.      +|++++.+
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~------~V~vlE~~   33 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGIT------DLLILEAT   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCC------CEEEECSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCC------cEEEEECC
Confidence            47999999 99999999999999862      69999986

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.66  E-value=0.039  Score=45.37  Aligned_cols=34  Identities=18%  Similarity=0.271  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.||+|||| |..|.+.|..|.+.|+       +++++|..
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~-------~v~l~E~~   81 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGY-------TVHLTDTA   81 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhcc-------ceeeEeec
Confidence            4589999999 9999999999999998       99999986

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=93.65  E-value=0.036  Score=44.72  Aligned_cols=35  Identities=23%  Similarity=0.435  Sum_probs=29.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +||.|||. |..|..++..|...++.+    ++...+|.+
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~----v~~iainTD   35 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHG----VEFVAVNTD   35 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTT----EEEEEEESC
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCc----eEEEEEcCC
Confidence            58999999 999999999999877643    377777777

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=93.61  E-value=0.13  Score=39.55  Aligned_cols=71  Identities=15%  Similarity=0.141  Sum_probs=44.9

Q ss_pred             CCCEEEEEcCCCc--hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           4 KPVRISITGAAGQ--IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      +..||+++|=..+  +..+++..+..-|.       +++++-..+   ......   ++.+   ....+++.+++..+++
T Consensus         2 ~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~-------~~~~~~p~~---~~~~~~---~~~~---~~~~~~~~~~d~~eai   65 (153)
T d1pg5a2           2 DGLVFALLGDLKYARTVNSLLRILTRFRP-------KLVYLISPQ---LLRARK---EILD---ELNYPVKEVENPFEVI   65 (153)
T ss_dssp             TTCEEEEEECCSSCHHHHHHHHHGGGSCC-------SEEEEECCG---GGCCCH---HHHT---TCCSCEEEESCGGGTG
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHHHcCC-------eeEEEeccc---ccccch---hhcc---cCCCeEEEEeCHHHHh
Confidence            3579999997333  88888888877665       555543331   100111   1111   1124678888999999


Q ss_pred             CCccEEEEe
Q psy9582          82 KDANIAILI   90 (329)
Q Consensus        82 ~~aDiVi~~   90 (329)
                      ++||+|..+
T Consensus        66 ~~aDvvy~~   74 (153)
T d1pg5a2          66 NEVDVLYVT   74 (153)
T ss_dssp             GGCSEEEEE
T ss_pred             hcCCeEEEe
Confidence            999998876

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.59  E-value=0.019  Score=45.50  Aligned_cols=79  Identities=13%  Similarity=0.174  Sum_probs=42.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhh--hhhcccCC-----ccceEeecCc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIME--IEDCIFPL-----LVDVSVHENP   77 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~d--l~~~~~~~-----~~~i~~~~~~   77 (329)
                      +||+|.|- |.||..++..+...+-+      ||+ +-|...  ..........+  +.+.....     ...+.+..+.
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~di------eiVaINd~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDM------ELIGITKTKP--DFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTL   73 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTE------EEEEEEESSC--SHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBH
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCc------eEEEEecCCC--hHHHHHhhhcCceeecccccceeeecccCccccchh
Confidence            68999998 99999998888765432      444 444431  11111111111  10100000     0123333455


Q ss_pred             ccccCCccEEEEeCCC
Q psy9582          78 ITAFKDANIAILIGSF   93 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~   93 (329)
                      .+.+.++|+||-+.|.
T Consensus        74 ~~~~~~vDvViEcTG~   89 (172)
T d2czca2          74 NDLLEKVDIIVDATPG   89 (172)
T ss_dssp             HHHHTTCSEEEECCST
T ss_pred             hhhhccCCEEEECCCC
Confidence            6667899999998654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.41  E-value=0.12  Score=40.07  Aligned_cols=97  Identities=11%  Similarity=0.102  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--Cc-ccc
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NP-ITA   80 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~-~~a   80 (329)
                      ...+|.|+|+ |.+|...+..+...|.       +++.+|.+    +++++ .+.++-.   .  .-+....  +. .+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~-------~vi~~~~~----~~k~~-~a~~lGa---~--~~i~~~~~~~~~~~~   88 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGA-------ETYVISRS----SRKRE-DAMKMGA---D--HYIATLEEGDWGEKY   88 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-------EEEEEESS----STTHH-HHHHHTC---S--EEEEGGGTSCHHHHS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccc-------cccccccc----hhHHH-HhhccCC---c--EEeeccchHHHHHhh
Confidence            3578999998 9999998887777776       89999998    55554 3333321   0  0011111  11 233


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP  135 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP  135 (329)
                      ..+.|+|+.+.+.......+                ..++- .+|.+.+++++-|
T Consensus        89 ~~~~d~vi~~~~~~~~~~~~----------------~~~~~-l~~~G~iv~~G~~  126 (168)
T d1piwa2          89 FDTFDLIVVCASSLTDIDFN----------------IMPKA-MKVGGRIVSISIP  126 (168)
T ss_dssp             CSCEEEEEECCSCSTTCCTT----------------TGGGG-EEEEEEEEECCCC
T ss_pred             hcccceEEEEecCCccchHH----------------HHHHH-hhccceEEEeccc
Confidence            45789999886544321111                11222 3478888888643

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.35  E-value=0.061  Score=39.32  Aligned_cols=33  Identities=6%  Similarity=-0.000  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+|+|+|+ |.+|.-+|..|...+.       ++.+++..
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~-------~vt~i~~~   54 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGR-------RTVMLVRT   54 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcch-------hheEeecc
Confidence            579999999 9999999999998886       89999987

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.30  E-value=0.096  Score=42.31  Aligned_cols=34  Identities=15%  Similarity=0.264  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.++|+|-|. |+||+.++..|...|.       +|+..|++
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Ga-------kvvv~d~d   59 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGA-------QLLVADTD   59 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEecch
Confidence            3479999998 9999999999999986       89999998

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=93.23  E-value=0.14  Score=39.24  Aligned_cols=63  Identities=13%  Similarity=0.100  Sum_probs=45.4

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           4 KPVRISITGA--AGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         4 ~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      +.+||+++|=  .|.+..+++..+..-|.       ++++....    .  +.   .+        ...+.++.+..+++
T Consensus         2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~g~-------~~~i~~P~----~--~~---~~--------~~~~~~~~~~~ea~   57 (151)
T d2at2a2           2 KGLTVSIHGDIKHSRVARSNAEVLTRLGA-------RVLFSGPS----E--WQ---DE--------ENTFGTYVSMDEAV   57 (151)
T ss_pred             CCCEEEEEcCCCCCHHHHHHHHHHHHcCC-------cccccCCc----h--hh---cc--------ccceeEEEechhcc
Confidence            3589999997  46799999998887776       78777665    1  11   00        12355667788999


Q ss_pred             CCccEEEEe
Q psy9582          82 KDANIAILI   90 (329)
Q Consensus        82 ~~aDiVi~~   90 (329)
                      +++|+|..+
T Consensus        58 ~~aDviy~~   66 (151)
T d2at2a2          58 ESSDVVMLL   66 (151)
T ss_pred             ccCceeeee
Confidence            999998875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.00  E-value=0.042  Score=44.10  Aligned_cols=36  Identities=6%  Similarity=0.063  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |.+..-|+|||| |..|.+.|..|++.|.       +|.++|.+
T Consensus         2 m~~~yDviViGa-G~~Gl~~A~~La~~G~-------~V~vlE~~   37 (297)
T d2bcgg1           2 IDTDYDVIVLGT-GITECILSGLLSVDGK-------KVLHIDKQ   37 (297)
T ss_dssp             CCCBCSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CCCcCCEEEECc-CHHHHHHHHHHHHCCC-------CEEEEcCC
Confidence            555577999998 9999999999999997       89999997

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.96  E-value=0.058  Score=39.76  Aligned_cols=33  Identities=21%  Similarity=0.333  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +.+|+|||| |.+|.-+|..|...|.       +|+|++..
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~-------~Vtlv~~~   64 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGY-------HVKLIHRG   64 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccc-------eEEEEecc
Confidence            368999999 9999999999999887       99999987

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.95  E-value=0.042  Score=44.82  Aligned_cols=34  Identities=15%  Similarity=0.309  Sum_probs=28.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|||| |..|.+.|..|.+.+.--     +|+++|..
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~-----~V~v~e~~   35 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRA-----HVDIYEKQ   35 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSC-----EEEEECSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCC-----eEEEEeCC
Confidence            59999999 999999999998653211     89999987

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.94  E-value=0.04  Score=46.84  Aligned_cols=33  Identities=27%  Similarity=0.405  Sum_probs=29.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+|+|||| |-+|.+.|+.|++.|..      +|+|+|.+
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~------~V~liE~~   34 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWN------NITVLDQG   34 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCC------CEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCC------cEEEEeCC
Confidence            47999999 99999999999998852      69999987

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.88  E-value=0.051  Score=40.17  Aligned_cols=34  Identities=21%  Similarity=0.266  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+++|||| |.+|.-+|..+...|.       +|+++.+.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~-------~Vtvi~~~   57 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGS-------EVTVVEFA   57 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTC-------EEEEECSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCC-------eEEEEEEc
Confidence            4689999999 9999999999999887       99999987

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.81  E-value=0.044  Score=42.44  Aligned_cols=34  Identities=15%  Similarity=0.143  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +..+|+|.|+ |.+|...+..+...+.       ++...|.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~-------~v~~~~~~   60 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGL-------NVVAVDIG   60 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTC-------EEEEECSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCC-------eEeccCCC
Confidence            3468999987 9999988887777776       89999988

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.066  Score=41.90  Aligned_cols=78  Identities=18%  Similarity=0.124  Sum_probs=44.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD   83 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
                      +..||+++|=..+|-.+++..+...|.       +++++-...   .........+..........+++.+.+..+++++
T Consensus         3 ~gl~I~~vGD~~nV~~Sli~~~~~~g~-------~~~~~~P~~---~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~   72 (170)
T d1otha2           3 KGLTLSWIGDGNNILHSIMMSAAKFGM-------HLQAATPKG---YEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHG   72 (170)
T ss_dssp             TTCEEEEESCSSHHHHHHHTTTGGGTC-------EEEEECCTT---CCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTT
T ss_pred             CCCEEEEEcCchhHHHHHHHHHHHcCC-------EEEEEeccc---cCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhh
Confidence            358999999833444444444444454       788887651   1111111111211110112468888999999999


Q ss_pred             ccEEEEeC
Q psy9582          84 ANIAILIG   91 (329)
Q Consensus        84 aDiVi~~~   91 (329)
                      ||+|....
T Consensus        73 advi~~~~   80 (170)
T d1otha2          73 GNVLITDT   80 (170)
T ss_dssp             CSEEEECC
T ss_pred             hhheeeec
Confidence            99998863

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.74  E-value=0.0084  Score=49.18  Aligned_cols=37  Identities=19%  Similarity=0.221  Sum_probs=27.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCc-eEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPI-ILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~-ei~L~D~~   45 (329)
                      |||+|||| |-+|.+.|+.|++.|.--  ..+ ++.+++..
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v--~v~e~~~i~~~~   38 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV--LQPLDVKVYADR   38 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT--SSSCEEEEEESC
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc--eEEeeeeecccC
Confidence            68999999 999999999999876410  011 56777654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=92.71  E-value=0.03  Score=46.58  Aligned_cols=36  Identities=17%  Similarity=0.197  Sum_probs=32.7

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |++...|.|||| |..|...|..|.+.|+       +|.|+|.+
T Consensus         1 M~~~~DViIIGa-G~aGl~aA~~la~~G~-------~V~vlEk~   36 (253)
T d2gqfa1           1 MSQYSENIIIGA-GAAGLFCAAQLAKLGK-------SVTVFDNG   36 (253)
T ss_dssp             CEEECSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CCCCCcEEEECc-CHHHHHHHHHHHHCCC-------cEEEEecC
Confidence            666678999999 9999999999999997       89999987

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=92.60  E-value=0.046  Score=42.87  Aligned_cols=96  Identities=10%  Similarity=0.181  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--Ccccc
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NPITA   80 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~~~a   80 (329)
                      ++..+|.|.||+|.+|...+..+...|.       ++...+.+    +++++ .+.++-   ...  -+....  .....
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~-------~vi~~~~~----~~~~~-~~~~lG---a~~--~i~~~~~~~~~~~   88 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGL-------RVLAAASR----PEKLA-LPLALG---AEE--AATYAEVPERAKA   88 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTC-------EEEEEESS----GGGSH-HHHHTT---CSE--EEEGGGHHHHHHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccc-------cccccccc----ccccc-cccccc---cce--eeehhhhhhhhhc
Confidence            3456899999889999998888888887       78888877    34443 222221   111  111111  11234


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV  136 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~  136 (329)
                      -+++|+||-+.|.      +    +          -..++-. +|.+.++.+++|.
T Consensus        89 ~~g~D~v~d~~G~------~----~----------~~~~~~l-~~~G~~v~~G~~~  123 (171)
T d1iz0a2          89 WGGLDLVLEVRGK------E----V----------EESLGLL-AHGGRLVYIGAAE  123 (171)
T ss_dssp             TTSEEEEEECSCT------T----H----------HHHHTTE-EEEEEEEEC----
T ss_pred             cccccccccccch------h----H----------HHHHHHH-hcCCcEEEEeCCC
Confidence            5789999987551      1    1          1224333 4888988887653

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.56  E-value=0.03  Score=45.29  Aligned_cols=34  Identities=24%  Similarity=0.389  Sum_probs=27.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +|-|||- |..|..++..|.+.++.+    +++..+|.+
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~----v~~iainTD   36 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKG----VEFIAINTD   36 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCS----EEEEEEESC
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCC----ceEEEEcch
Confidence            6889998 999999999999887643    367777776

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.45  E-value=0.057  Score=42.35  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+|+|+|+ |.+|...+..+...+..      .|...|.+
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~------~v~~~~~~   62 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGAS------IIIAVDIV   62 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCS------EEEEEESC
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccc------eeeeeccH
Confidence            468999998 99999988888776652      67788888

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.42  E-value=0.053  Score=43.01  Aligned_cols=77  Identities=16%  Similarity=0.082  Sum_probs=43.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHh--hhh-hcccCC-----ccceEeecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIM--EIE-DCIFPL-----LVDVSVHEN   76 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~--dl~-~~~~~~-----~~~i~~~~~   76 (329)
                      .||+|.|- |.+|..++..+.+.+-+      ||+-+ |..    .........  +.. +.....     ...+.+..+
T Consensus         2 IKVaINGf-GRIGR~v~Ral~~~~di------evVaInd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~   70 (178)
T d1b7go1           2 VNVAVNGY-GTIGKRVADAIIKQPDM------KLVGVAKTS----PNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGT   70 (178)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTE------EEEEEECSS----CSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCC
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCCC------EEEEEECCC----CcHHHHHhcccCcceeccCccceeccccceecCCc
Confidence            58999998 99999999998876532      55554 333    111111110  000 000000     023344455


Q ss_pred             cccccCCccEEEEeCCC
Q psy9582          77 PITAFKDANIAILIGSF   93 (329)
Q Consensus        77 ~~~al~~aDiVi~~~g~   93 (329)
                      ..+.+.++|+||.+.|.
T Consensus        71 ~~~~~~~vDiViecTG~   87 (178)
T d1b7go1          71 VEDLIKTSDIVVDTTPN   87 (178)
T ss_dssp             HHHHHHHCSEEEECCST
T ss_pred             hhhhhhcCCEEEECCCC
Confidence            66777899999998654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.41  E-value=0.068  Score=36.28  Aligned_cols=32  Identities=13%  Similarity=0.131  Sum_probs=29.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++|+|+|+ |..|+-++..-..-|+       +++.+|.+
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~-------~v~vldp~   33 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGI-------AVWPVGLD   33 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTE-------EEEEECTT
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC-------EEEEEcCC
Confidence            47999999 9999999998888888       99999998

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.33  E-value=0.096  Score=38.80  Aligned_cols=34  Identities=24%  Similarity=0.282  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+++|||| |.+|.-+|..+...|.       ++++++..
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~-------~Vtive~~   58 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGS-------RLDVVEMM   58 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTC-------EEEEECSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCC-------EEEEEEee
Confidence            4689999999 9999999999999887       99999886

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.058  Score=48.88  Aligned_cols=33  Identities=15%  Similarity=0.467  Sum_probs=30.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||.|||+ |++|+.++..|+..|+ +     +|+|+|.+
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gv-g-----~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGF-R-----QIHVIDMD   70 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTC-C-----CEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEEECC
Confidence            68999999 9999999999999986 3     79999987

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.81  E-value=0.045  Score=44.61  Aligned_cols=36  Identities=22%  Similarity=0.386  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..||.|||. |.-|..++..|...++.+    ++...+|.+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~----v~~iainTD   50 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEG----AKTVAINTD   50 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTT----EEEEEEESB
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCc----eEEEEEeCC
Confidence            479999999 999999999999877643    367777777

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.67  E-value=0.069  Score=44.67  Aligned_cols=31  Identities=23%  Similarity=0.429  Sum_probs=28.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -|+|||| |-+|.+.|+.|++.|+       +|+|+|..
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~-------~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGV-------KTLLVDAF   35 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-------cEEEEeCC
Confidence            4899999 9999999999999987       89999986

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.66  E-value=1  Score=32.44  Aligned_cols=33  Identities=15%  Similarity=0.286  Sum_probs=27.7

Q ss_pred             CEEEEEcCC---CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAA---GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++|+|+|||   +..|..+...|++.|+       +|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~-------~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGF-------EVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTC-------EEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCC-------EEEEEccc
Confidence            579999986   4678889999999998       88888765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=91.60  E-value=0.2  Score=38.92  Aligned_cols=40  Identities=10%  Similarity=0.220  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      +.-+|.|+|| |.+|...+..+...+..      +|...|.+    +++++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~------~Vi~~~~~----~~k~~   67 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAA------RIIGVDIN----KDKFA   67 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSC----GGGHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCc------eEEeecCc----HHHHH
Confidence            3468999999 99999998888887653      89999998    55544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.38  E-value=0.25  Score=40.57  Aligned_cols=33  Identities=12%  Similarity=0.291  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .++|+|-|- |+||+.+|..|.+.|.       .|+..|.+
T Consensus        39 g~~v~IqG~-GnVG~~~a~~L~~~Ga-------kvv~~d~~   71 (230)
T d1leha1          39 GLAVSVQGL-GNVAKALCKKLNTEGA-------KLVVTDVN   71 (230)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-------EEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEeeccc
Confidence            479999998 9999999999999987       89999998

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.00  E-value=0.25  Score=41.25  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=32.0

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh
Q psy9582           9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE   61 (329)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~   61 (329)
                      .|+||++.+|.++|..|++.|.       +|++.|.+.   ++.++....++.
T Consensus         6 lITGas~GIG~aiA~~la~~Ga-------~V~i~~~~~---~~~~~~~~~~l~   48 (284)
T d1e7wa_           6 LVTGAAKRLGRSIAEGLHAEGY-------AVCLHYHRS---AAEANALSATLN   48 (284)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC---HHHHHHHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCC---HHHHHHHHHHHH
Confidence            4569999999999999999997       899988762   333444444443

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=90.91  E-value=0.29  Score=38.16  Aligned_cols=44  Identities=9%  Similarity=0.127  Sum_probs=33.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI   60 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl   60 (329)
                      .-+|+|+|+ |.+|...+..+...|.-      .|+..|.+    +++++ .+.++
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~------~Vi~~d~~----~~r~~-~a~~~   72 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGAS------RIIAIDIN----GEKFP-KAKAL   72 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSC----GGGHH-HHHHT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCc------eeeeeccc----hHHHH-HHHHh
Confidence            468999998 99999988888877752      78999998    55554 44444

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=90.82  E-value=0.16  Score=41.83  Aligned_cols=71  Identities=14%  Similarity=0.251  Sum_probs=40.1

Q ss_pred             CCCCEEEEEcCCCc----hHHHHHHHHHhC-CCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecC
Q psy9582           3 KKPVRISITGAAGQ----IGYNIIFRIANG-DLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN   76 (329)
Q Consensus         3 ~~~~kI~IiGa~G~----vG~~la~~l~~~-~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~   76 (329)
                      ++++||+|||+ |.    ++...+..+... +.+      +|+ ++|++    .++++.....+.      ........+
T Consensus        14 ~k~irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~------~ivav~d~~----~~~~~~~~~~~~------~~~~~~~~~   76 (237)
T d2nvwa1          14 SRPIRVGFVGL-TSGKSWVAKTHFLAIQQLSSQF------QIVALYNPT----LKSSLQTIEQLQ------LKHATGFDS   76 (237)
T ss_dssp             GCCEEEEEECC-CSTTSHHHHTHHHHHHHTTTTE------EEEEEECSC----HHHHHHHHHHTT------CTTCEEESC
T ss_pred             CCCeEEEEEec-CccccHHHHHHHHHHHhcCCCe------EEEEEEcCC----HHHHHHHHHhcc------cccceeecc
Confidence            35689999998 76    444555556543 322      666 88988    444443222221      112333455


Q ss_pred             ccccc--CCccEEEEe
Q psy9582          77 PITAF--KDANIAILI   90 (329)
Q Consensus        77 ~~~al--~~aDiVi~~   90 (329)
                      ..+.+  .+-|+|+++
T Consensus        77 ~~~l~~~~~iD~V~i~   92 (237)
T d2nvwa1          77 LESFAQYKDIDMIVVS   92 (237)
T ss_dssp             HHHHHHCTTCSEEEEC
T ss_pred             hhhcccccccceeecc
Confidence            55555  367888887

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.78  E-value=0.086  Score=37.80  Aligned_cols=23  Identities=4%  Similarity=0.150  Sum_probs=20.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG   28 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~   28 (329)
                      .++|+|||+ |.-|.-+|..|+..
T Consensus        32 gK~VlVVG~-g~Sa~dia~~l~~~   54 (107)
T d2gv8a2          32 GESVLVVGG-ASSANDLVRHLTPV   54 (107)
T ss_dssp             TCCEEEECS-SHHHHHHHHHHTTT
T ss_pred             CCeEEEECC-CCCHHHHHHHHHHh
Confidence            479999999 99999999999754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=90.68  E-value=0.045  Score=40.80  Aligned_cols=36  Identities=14%  Similarity=0.301  Sum_probs=26.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++.+|+|+|| |+.|..++..+....-+.     =+.++|.+
T Consensus         2 ~~~~v~I~Ga-G~~G~~l~~~l~~~~~~~-----iv~fiDdd   37 (126)
T d2dt5a2           2 RKWGLCIVGM-GRLGSALADYPGFGESFE-----LRGFFDVD   37 (126)
T ss_dssp             SCEEEEEECC-SHHHHHHHHCSCCCSSEE-----EEEEEESC
T ss_pred             CCceEEEEcC-CHHHHHHHHhHhhcCCcE-----EEEEEeCc
Confidence            4579999999 999999987654332222     67888988

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.62  E-value=0.19  Score=36.50  Aligned_cols=37  Identities=16%  Similarity=0.053  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+|+|||| |.+|.-+|..|...+..+    .+|++++..
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~----~~Vtli~~~   55 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKD----GQVTLCYRG   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTT----CEEEEEESS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCC----cEEEEEecc
Confidence            3579999999 999999998776544322    189999986

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.43  E-value=0.17  Score=36.68  Aligned_cols=37  Identities=19%  Similarity=0.108  Sum_probs=28.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+.+++|||| |.+|.-+|..|......+    .+|++++..
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g----~~Vtli~~~   53 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARG----GQVDLAYRG   53 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTT----CEEEEEESS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccc----cccceeccc
Confidence            3689999999 999999998776542222    189999986

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.34  E-value=2.2  Score=31.42  Aligned_cols=34  Identities=9%  Similarity=0.044  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCC---chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAG---QIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G---~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ++.|+|||||-   ..|..++..|...|+       .+.++..+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~-------~~~~v~~~   49 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGY-------RVLPVNPR   49 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTC-------EEEEECGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCC-------CceEEEec
Confidence            57899999974   578888889999888       78999877

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.33  E-value=0.17  Score=40.65  Aligned_cols=34  Identities=21%  Similarity=0.318  Sum_probs=28.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +|-|||- |..|..++..|...++.+    +++..+|.+
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~----v~~iainTD   36 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEG----VEFICANTD   36 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCS----EEEEEEESB
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCC----eEEEEEeCc
Confidence            6889999 999999999999887643    477777777

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.96  E-value=0.11  Score=44.43  Aligned_cols=32  Identities=16%  Similarity=0.169  Sum_probs=29.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .+|+|||| |..|.++|..|++.|.       +|.+++.+
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~-------~V~iiEk~   33 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNK-------KVLVIEKR   33 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTC-------CEEEECSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCC-------cEEEEECC
Confidence            46999999 9999999999998886       89999987

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.80  E-value=0.051  Score=42.54  Aligned_cols=39  Identities=15%  Similarity=0.287  Sum_probs=27.1

Q ss_pred             CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||.+  ++||+|||+ |.+|...+..+...+-..     .+.++|..
T Consensus         1 ~~~~~~k~kv~iIG~-G~~g~~h~~~l~~~~~~~-----~~~~~~~~   41 (172)
T d1lc0a1           1 MITNSGKFGVVVVGV-GRAGSVRLRDLKDPRSAA-----FLNLIGFV   41 (172)
T ss_dssp             CCCCCCSEEEEEECC-SHHHHHHHHHHTSHHHHT-----TEEEEEEE
T ss_pred             CCCCCCCcEEEEEcC-CHHHHHHHHHHHhCCCCc-----EEEEEecc
Confidence            5543  579999998 999999888776532211     46666655

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=89.55  E-value=0.56  Score=36.04  Aligned_cols=45  Identities=7%  Similarity=0.126  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI   60 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl   60 (329)
                      +.-+|+|+|+ |.+|...+..+...+-.      +|...|.+    +++++ .+.++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~------~Vi~~~~~----~~rl~-~a~~~   72 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAK------RIIAVDLN----PDKFE-KAKVF   72 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSC----GGGHH-HHHHT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhc------hheeecch----HHHHH-HHHHc
Confidence            3468999998 98998888777766542      79999998    56554 34444

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.37  E-value=0.15  Score=41.60  Aligned_cols=32  Identities=19%  Similarity=0.268  Sum_probs=29.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||| |..|...|..|.+.|+       +|.|+|.+
T Consensus         3 yDViIIGa-G~aGl~aA~~la~~G~-------~V~liEk~   34 (251)
T d2i0za1           3 YDVIVIGG-GPSGLMAAIGAAEEGA-------NVLLLDKG   34 (251)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC-------cEEEEeCC
Confidence            35999999 9999999999999998       89999987

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.25  E-value=0.099  Score=42.20  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=32.2

Q ss_pred             CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |.+..-|+|||| |..|.+.|..+++.|.       +|.|+|..
T Consensus         2 m~~~yDviVIG~-GpAGl~aA~~aa~~G~-------kV~lie~~   37 (233)
T d1v59a1           2 INKSHDVVIIGG-GPAGYVAAIKAAQLGF-------NTACVEKR   37 (233)
T ss_dssp             EEEEEEEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             CCcccCEEEECC-CHHHHHHHHHHHHCCC-------cEEEEEec
Confidence            556678999999 9999999999999988       89999976

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.25  E-value=0.21  Score=39.80  Aligned_cols=41  Identities=10%  Similarity=0.116  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      +..-+|+|+|| |.+|...+..+...+..      .|...|.+    +++++
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~------~Vi~~d~~----~~rl~   64 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAA------VVIVGDLN----PARLA   64 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEEESC----HHHHH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhccc------ceeeeccc----chhhH
Confidence            34568999998 99998777776665542      79999998    55554

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.22  E-value=0.17  Score=39.43  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=28.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +..+|.|.||+|.+|...+..+...|.       ++...+.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~-------~vi~~~~~   59 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGA-------RIYTTAGS   59 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-------EEEEEESS
T ss_pred             CCCEEEEECCCCCcccccchhhccccc-------cceeeecc
Confidence            346899999999999998888877776       77777776

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=89.21  E-value=0.27  Score=33.04  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +..+|.|.||+|.||+..++.+...|.       +|...-.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~-------~Vi~~t~s   65 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGY-------QVVAVSGR   65 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTC-------CEEEEESC
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCC-------eEEEEECC
Confidence            347899999999999998888787776       78777776

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.18  E-value=0.076  Score=42.08  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ...+|+|||| |..|...|..+...++       ++.++|..
T Consensus         4 ~~~~VvIIGg-GpaGl~aA~~~ar~g~-------~v~vie~~   37 (192)
T d1vdca1           4 HNTRLCIVGS-GPAAHTAAIYAARAEL-------KPLLFEGW   37 (192)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHHTTC-------CCEEECCS
T ss_pred             ccceEEEECC-CHHHHHHHHHHHHcCC-------cEEEEEee
Confidence            4579999999 9999999999999888       78899865

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=89.10  E-value=0.17  Score=39.04  Aligned_cols=35  Identities=11%  Similarity=0.098  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .-+|.|+|++|.+|...+..+...+..      +|...|.+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~------~V~~~~~~   62 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGA------TIIGVDVR   62 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCC------EEEEEESS
T ss_pred             CCEEEEEeccccceeeeeecccccccc------cccccccc
Confidence            468999998799999888888776653      89999998

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=88.99  E-value=0.095  Score=41.27  Aligned_cols=34  Identities=26%  Similarity=0.401  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |..+|+|||+ |..|..-|..+...++       +++++|..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~-------~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANL-------QPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTC-------CCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCC-------ceEEEEee
Confidence            4568999999 9999999999999887       78999865

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.99  E-value=0.16  Score=43.42  Aligned_cols=32  Identities=22%  Similarity=0.450  Sum_probs=29.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..|+|||| |..|...|..|.+.|+       +++++|..
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~-------~v~i~Ek~   39 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGR-------SVHVIETA   39 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCC-------CEEEEEcC
Confidence            68999999 9999999999999887       89999987

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.98  E-value=0.16  Score=38.70  Aligned_cols=31  Identities=13%  Similarity=0.427  Sum_probs=25.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|||| |.+|..+|..|.. +.       +|++++..
T Consensus         1 ~rVvIIGg-G~~G~e~A~~l~~-~~-------~Vtvv~~~   31 (167)
T d1xhca1           1 SKVVIVGN-GPGGFELAKQLSQ-TY-------EVTVIDKE   31 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TS-------EEEEECSS
T ss_pred             CeEEEECC-cHHHHHHHHHHHc-CC-------CEEEEecc
Confidence            38999999 9999999988864 33       89999875

>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

Probab=88.88  E-value=0.69  Score=38.08  Aligned_cols=58  Identities=16%  Similarity=0.050  Sum_probs=40.5

Q ss_pred             ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC-chhhHHHH
Q psy9582          70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN-PVNTNTYI  142 (329)
Q Consensus        70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN-P~~~~~~~  142 (329)
                      .++++++..|++++||+||++-..+               +.++++.+.|..+.+++++++..|. +......+
T Consensus       128 Gv~v~~d~~Eav~~ADiII~~vP~~---------------~~v~~Vi~~I~~~l~~g~Iiid~STi~~~~~~~l  186 (242)
T d2b0ja2         128 GLKVTSDDREAVEGADIVITWLPKG---------------NKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKI  186 (242)
T ss_dssp             TCEEESCHHHHHTTCSEEEECCTTC---------------TTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHH
T ss_pred             CCEEECCHHHHHhcCCeEEEeeecH---------------HHHHHHHHHHHhhCCCCcEEEecCCCcHHHHHHH
Confidence            4788899999999999999973221               2456667888888877877765553 44444333

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=88.83  E-value=0.14  Score=40.12  Aligned_cols=80  Identities=16%  Similarity=0.152  Sum_probs=43.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC------ccceEeecCcc
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL------LVDVSVHENPI   78 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~------~~~i~~~~~~~   78 (329)
                      .||+|-|- |.+|..++..+...+-+      +|+.+.... +..........+..... .+.      ...+.+..+..
T Consensus         2 ~~VgINGf-GRIGR~v~R~l~~~~di------~vvaInd~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           2 KAVAINGY-GTVGKRVADAIAQQDDM------KVIGVSKTR-PDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSSSE------EEEEEEESS-CSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             eEEEEEcC-cHHHHHHHHHHHhCCCc------eEEEEecCC-cHHHHHHHHhcCCceEecccccceeecccCcccCCChh
Confidence            47999998 99999998888766532      555544321 11111111111111100 000      01233334455


Q ss_pred             cccCCccEEEEeCCC
Q psy9582          79 TAFKDANIAILIGSF   93 (329)
Q Consensus        79 ~al~~aDiVi~~~g~   93 (329)
                      +.+.++|+||.+.|.
T Consensus        74 ~~~~~vDvViEcTG~   88 (171)
T d1cf2o1          74 DMLDEADIVIDCTPE   88 (171)
T ss_dssp             HHHHTCSEEEECCST
T ss_pred             HhhcCCCEEEEccCC
Confidence            677899999998554

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=88.67  E-value=0.2  Score=41.84  Aligned_cols=114  Identities=12%  Similarity=0.131  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      ..||++||-    - .+...+.+.+.       ++.++|++    .+  .   .|+.+            ...++.+..|
T Consensus       122 g~kV~vIG~----~-P~v~~l~~~~~-------~~~VlE~~----p~--~---gd~p~------------~~~~~lLp~a  168 (251)
T d2h1qa1         122 GKKVGVVGH----F-PHLESLLEPIC-------DLSILEWS----PE--E---GDYPL------------PASEFILPEC  168 (251)
T ss_dssp             TSEEEEESC----C-TTHHHHHTTTS-------EEEEEESS----CC--T---TCEEG------------GGHHHHGGGC
T ss_pred             CCEEEEEec----c-hhHHHHHhcCC-------cEEEEeCC----CC--C---CCCCc------------hHHHHhhhcC
Confidence            479999987    3 55666666665       89999998    32  1   12211            2236788999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHHH
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHN  164 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~  164 (329)
                      |+||+|+.                 .++-.-.+.+-+.| +++..+++.-|...+.+.+.+ . |+  +.++|.-..|..
T Consensus       169 D~viiTGs-----------------TlvN~Tl~~LL~~~-~~a~~vvl~GPS~p~~P~lf~-~-Gv--~~lag~~v~d~~  226 (251)
T d2h1qa1         169 DYVYITCA-----------------SVVDKTLPRLLELS-RNARRITLVGPGTPLAPVLFE-H-GL--QELSGFMVKDNA  226 (251)
T ss_dssp             SEEEEETH-----------------HHHHTCHHHHHHHT-TTSSEEEEESTTCCCCGGGGG-T-TC--SEEEEEEESCHH
T ss_pred             CEEEEEec-----------------hhhcCCHHHHHHhC-CcCCEEEEECCCcccCHHHHh-c-CC--ceEeEEEEeCHH
Confidence            99999952                 23333344555556 555444555555555554433 3 54  346666678888


Q ss_pred             HHHHHHHHH
Q psy9582         165 RAIAKLASK  173 (329)
Q Consensus       165 r~~~~la~~  173 (329)
                      ++.+.+++-
T Consensus       227 ~~~~~i~~G  235 (251)
T d2h1qa1         227 RAFRIVAGA  235 (251)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHHcC
Confidence            888877643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.43  E-value=0.18  Score=42.73  Aligned_cols=30  Identities=23%  Similarity=0.357  Sum_probs=28.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      |+|||| |..|.+.|..|.+.|+       +|++++.+
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~-------~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGL-------NVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCC-------CEEEEecC
Confidence            899999 9999999999999997       89999975

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=88.42  E-value=0.46  Score=37.00  Aligned_cols=45  Identities=11%  Similarity=0.220  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI   60 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl   60 (329)
                      +.-.|+|+|+ |.+|...+..+...+..      +|..+|.+    +++++ .+.++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~------~Vi~vd~~----~~kl~-~Ak~~   73 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGAS------RIIGIDLN----KDKFE-KAMAV   73 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSC----GGGHH-HHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCc------eEEEecCc----HHHHH-HHHhc
Confidence            3467999998 99999998888887753      89999999    66665 44444

>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Rab23
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.34  E-value=0.16  Score=38.78  Aligned_cols=113  Identities=14%  Similarity=0.174  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCCchHH-HHHHHHHhCCCCCCCCC-c--eEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582           5 PVRISITGAAGQIGY-NIIFRIANGDLLGKDQP-I--ILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA   80 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~-~--ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
                      +.||+++|. .++|. +++..+..+.......| +  +..-.....+  ...   ...++.+...  .  -....-....
T Consensus         2 ~iKv~liG~-~~vGKSsLi~rl~~~~~~~~~~~ti~~~~~~~~~~~~--~~~---~~~~i~d~~g--~--~~~~~~~~~~   71 (164)
T d1z2aa1           2 AIKMVVVGN-GAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVN--DED---VRLMLWDTAG--Q--EEFDAITKAY   71 (164)
T ss_dssp             EEEEEEECS-TTSSHHHHHHHHHHCCCCCCSSCCCSSSEEEEEEEET--TEE---EEEEEECCTT--G--GGTTCCCHHH
T ss_pred             eEEEEEECC-CCcCHHHHHHHHHhCCCCcccccccccccceeeeeec--Cce---eeeeeeccCC--c--cchhhhhhhh
Confidence            369999998 99995 56777776543321112 1  1111111100  000   1111112110  0  0001112346


Q ss_pred             cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ++++|+++++-....     +.     ...-+..+.+.+.+++ ++..++++.|-.|.
T Consensus        72 ~~~~~~~i~v~d~~~-----~~-----s~~~~~~~~~~i~~~~-~~~~iilVgnK~Dl  118 (164)
T d1z2aa1          72 YRGAQACVLVFSTTD-----RE-----SFEAISSWREKVVAEV-GDIPTALVQNKIDL  118 (164)
T ss_dssp             HTTCCEEEEEEETTC-----HH-----HHHTHHHHHHHHHHHH-CSCCEEEEEECGGG
T ss_pred             hccCceEEEEEeccc-----hh-----hhhhcccccccccccC-CCceEEEeeccCCc
Confidence            889999888632211     11     1123445556677776 77778889998885

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=88.31  E-value=0.5  Score=35.95  Aligned_cols=72  Identities=11%  Similarity=0.137  Sum_probs=47.8

Q ss_pred             CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ..||+++|=.  +.|..+++..+..-|.       +++++-...   ....+.....+..    ....+..+.+..++++
T Consensus         4 gl~i~~vGD~~~srV~~Sli~~~~~~g~-------~~~~~~P~~---~~~~~~~~~~~~~----~~~~~~~~~d~~~av~   69 (157)
T d1ml4a2           4 GLKIGLLGDLKYGRTVHSLAEALTFYDV-------ELYLISPEL---LRMPRHIVEELRE----KGMKVVETTTLEDVIG   69 (157)
T ss_dssp             SEEEEEESCTTTCHHHHHHHHHGGGSCE-------EEEEECCGG---GCCCHHHHHHHHH----TTCCEEEESCTHHHHT
T ss_pred             CCEEEEEcCCccChHHHHHHHHHHhcCC-------cEEEEccch---hhcchHHHHHHHh----hcccceeecCHHHhhc
Confidence            5799999973  5788888888877665       788876651   1111111112221    1245778889999999


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      ++|+|...
T Consensus        70 ~aDvvy~~   77 (157)
T d1ml4a2          70 KLDVLYVT   77 (157)
T ss_dssp             TCSEEEEC
T ss_pred             cCcEEEee
Confidence            99988775

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.28  E-value=0.23  Score=37.21  Aligned_cols=24  Identities=29%  Similarity=0.596  Sum_probs=20.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDL   30 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~   30 (329)
                      ||+|+||+|.||+.++..+.+..-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~   24 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADD   24 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC
Confidence            799999999999999998877543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.04  E-value=0.26  Score=36.20  Aligned_cols=96  Identities=8%  Similarity=0.016  Sum_probs=52.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCc-ccccCCc
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENP-ITAFKDA   84 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~-~~al~~a   84 (329)
                      .|.|+|. |.+|..++..|.  +.       ++.++|.+    +++.+.    +......+. .+.+-...+ ...+..|
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~-------~i~vi~~d----~~~~~~----~~~~~~~~i~Gd~~~~~~L~~a~i~~A   63 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GS-------EVFVLAED----ENVRKK----VLRSGANFVHGDPTRVSDLEKANVRGA   63 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GG-------GEEEEESC----TTHHHH----HHHTTCEEEESCTTSHHHHHHTTCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHc--CC-------CCEEEEcc----hHHHHH----HHhcCccccccccCCHHHHHHhhhhcC
Confidence            4889998 999999999874  22       67888988    444332    121111110 111000111 2347889


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC-ch
Q psy9582          85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN-PV  136 (329)
Q Consensus        85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN-P~  136 (329)
                      +.+|++...           -..|..    ++..++++. |+..++..++ |-
T Consensus        64 ~~vi~~~~~-----------d~~n~~----~~~~~r~~~-~~~~iia~~~~~~  100 (129)
T d2fy8a1          64 RAVIVNLES-----------DSETIH----CILGIRKID-ESVRIIAEAERYE  100 (129)
T ss_dssp             SEEEECCSS-----------HHHHHH----HHHHHHHHC-SSSCEEEECSSGG
T ss_pred             cEEEEeccc-----------hhhhHH----HHHHHHHHC-CCceEEEEEcCHH
Confidence            999987321           023333    344556664 8876666654 54

>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=88.01  E-value=0.74  Score=35.11  Aligned_cols=73  Identities=12%  Similarity=0.124  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCCc--hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGAAGQ--IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ..||+++|=..+  +..+++..+...+..      .+++.-..    .........+..+.   ....+..+.+..++++
T Consensus         4 gl~i~~vGD~~nsrv~~Sli~~l~~~~~~------~~~~~~P~----~~~~~~~~~~~~~~---~~~~~~~~~d~~~a~~   70 (160)
T d1ekxa2           4 NLHVAMVGDLKYGRTVHSLTQALAKFDGN------RFYFIAPD----ALAMPQYILDMLDE---KGIAWSLHSSIEEVMA   70 (160)
T ss_dssp             SCEEEEESCTTTCHHHHHHHHHHTTSSSC------EEEEECCG----GGCCCHHHHHHHHH---TTCCEEECSCSTTTGG
T ss_pred             CCEEEEEcCCCccHHHHHHHHHHHHcCCC------eEEeeccc----hhhhhHHHHHHHhh---hccccccccCHHHHhC
Confidence            579999997333  777777777655432      56776554    11112222222222   1235777889999999


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +||+|..+
T Consensus        71 ~aDvvy~~   78 (160)
T d1ekxa2          71 EVDILYMT   78 (160)
T ss_dssp             GCSEEEEC
T ss_pred             cCceEEee
Confidence            99998865

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=87.22  E-value=0.85  Score=34.87  Aligned_cols=45  Identities=11%  Similarity=0.141  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhh
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI   60 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl   60 (329)
                      +.-+|.|.|+ |.+|...+..+...+..      .|...|.+    +++++ .+.++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~------~vi~~~~~----~~k~~-~ak~l   72 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGAS------RIIGVDIN----KDKFA-RAKEF   72 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS------EEEEECSC----GGGHH-HHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcC------ceEEEccc----HHHHH-HHHHh
Confidence            3468999998 89999888888777652      68888887    55543 34444

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=86.54  E-value=0.36  Score=36.83  Aligned_cols=48  Identities=23%  Similarity=0.344  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhh
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEI   60 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl   60 (329)
                      |++|+|+|++|+||......+.+. +.+      +|..+-.+  ++-+.+..++.++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f------~v~~lsa~--~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY------QVIALTAN--RNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE------EEEEEEES--SCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc------EEEEEEeC--CCHHHHHHHHHhh
Confidence            579999999999999977777664 222      67666655  2344444444433

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.34  E-value=0.32  Score=38.74  Aligned_cols=32  Identities=28%  Similarity=0.174  Sum_probs=28.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||| |..|.+.|..+.+.|+       +|.+++.+
T Consensus         3 yDvvVIG~-G~aG~~aA~~a~~~G~-------kV~iiE~~   34 (217)
T d1gesa1           3 YDYIAIGG-GSGGIASINRAAMYGQ-------KCALIEAK   34 (217)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTTC-------CEEEEESS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC-------EEEEEecc
Confidence            35899999 9999999999999987       89999875

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.32  E-value=0.26  Score=42.01  Aligned_cols=32  Identities=22%  Similarity=0.394  Sum_probs=27.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh-----CCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN-----GDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-----~~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||| |-+|.++|..|++     .|+       +|+++|.+
T Consensus         8 yDV~IvGa-G~aGl~lA~~La~~~~~~~G~-------~v~vlEr~   44 (360)
T d1pn0a1           8 CDVLIVGA-GPAGLMAARVLSEYVRQKPDL-------KVRIIDKR   44 (360)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTC-------CEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHhcccccCCC-------cEEEEcCC
Confidence            46999999 9999999999974     566       89999987

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.28  E-value=0.32  Score=37.42  Aligned_cols=25  Identities=20%  Similarity=0.407  Sum_probs=22.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDL   30 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~   30 (329)
                      ..+|+|||| |.+|.-+|..|...+.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~   27 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGW   27 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCC
Confidence            468999999 9999999999998876

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=85.67  E-value=0.63  Score=36.04  Aligned_cols=39  Identities=10%  Similarity=0.174  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK   54 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~   54 (329)
                      .-+|+|+|+ |.+|...+..+...+..      +|...|.+    +++++
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~------~Vi~~d~~----~~kl~   66 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGAS------RIIGVGTH----KDKFP   66 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCS------EEEEECSC----GGGHH
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCc------eeeccCCh----HHHHH
Confidence            468999998 99999988888877752      79999998    56654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=85.25  E-value=0.37  Score=40.15  Aligned_cols=32  Identities=22%  Similarity=0.548  Sum_probs=28.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||| |..|...|..|++. |+       ++.++|..
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~-------~V~vlE~~   66 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNV-------QVAIIEQS   66 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTS-------CEEEEESS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCC-------eEEEEecC
Confidence            45999999 99999999999874 87       89999986

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.23  E-value=0.38  Score=37.04  Aligned_cols=31  Identities=19%  Similarity=0.254  Sum_probs=27.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -|+|||| |..|...|..+.+.|+       ++.++|.+
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~-------~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGI-------RTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTC-------CEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCC-------eEEEEEEe
Confidence            5899999 9999999999999988       78999764

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=84.43  E-value=2.1  Score=34.40  Aligned_cols=24  Identities=13%  Similarity=0.091  Sum_probs=21.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDL   30 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (329)
                      +||+|||= |+-|.+.|..|...|+
T Consensus        45 KkIaViGY-GsQG~AhAlNLrDSG~   68 (226)
T d1qmga2          45 KQIGVIGW-GSQAPAQAQNLKDSLT   68 (226)
T ss_dssp             SEEEEECC-SSHHHHHHHHHHHHHH
T ss_pred             CEEEEEEe-ccHHHHHHHhChhhcc
Confidence            68999998 9999999999998653

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.38  E-value=0.39  Score=38.10  Aligned_cols=32  Identities=22%  Similarity=0.285  Sum_probs=28.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||| |..|.+.|..+.+.|.       ++.++|..
T Consensus         4 yDvvVIGg-GpaGl~aA~~aa~~G~-------kV~vie~~   35 (221)
T d1dxla1           4 NDVVIIGG-GPGGYVAAIKAAQLGF-------KTTCIEKR   35 (221)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTC-------CEEEEECS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC-------cEEEEEec
Confidence            45899999 9999999999999887       89999976

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.09  E-value=0.57  Score=34.71  Aligned_cols=33  Identities=18%  Similarity=0.199  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHh----CCCCCCCCCceEEEEecC
Q psy9582           5 PVRISITGAAGQIGYNIIFRIAN----GDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~----~~~~~~~~~~ei~L~D~~   45 (329)
                      ..+|+|||| |.+|.-+|..|..    .+.       +|++++..
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~-------~Vt~i~~~   73 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGT-------EVIQLFPE   73 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTC-------EEEEECSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCC-------EEEEeccc
Confidence            568999999 9999988888853    354       89999886

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.97  E-value=0.29  Score=38.35  Aligned_cols=64  Identities=16%  Similarity=0.250  Sum_probs=42.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582           5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA   84 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
                      .+||+|||= |+=|.+.|..|...|+       +|++ -..+++   +-  .  +..... .    +++ .+..||.+.|
T Consensus        16 ~k~IaViGY-GsQG~AhAlNLrDSG~-------~V~V-GLr~gs---~s--~--~~A~~~-G----f~v-~~~~eA~~~a   73 (182)
T d1np3a2          16 GKKVAIIGY-GSQGHAHACNLKDSGV-------DVTV-GLRSGS---AT--V--AKAEAH-G----LKV-ADVKTAVAAA   73 (182)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTC-------CEEE-ECCTTC---HH--H--HHHHHT-T----CEE-ECHHHHHHTC
T ss_pred             CCEEEEEee-CcHhHHHHhhhhhcCC-------CEEE-EcCCCC---cc--H--HHHhhh-c----ccc-ccHHHHhhhc
Confidence            479999998 9999999999999998       5554 444211   00  1  111110 1    222 3457899999


Q ss_pred             cEEEEe
Q psy9582          85 NIAILI   90 (329)
Q Consensus        85 DiVi~~   90 (329)
                      |+|.++
T Consensus        74 Diim~L   79 (182)
T d1np3a2          74 DVVMIL   79 (182)
T ss_dssp             SEEEEC
T ss_pred             Ceeeee
Confidence            999997

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.30  E-value=0.76  Score=35.31  Aligned_cols=35  Identities=14%  Similarity=0.114  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      +..+|.|+||+|.+|...+..+...|.       +++..+.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~-------~vi~~~~~   62 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGL-------KILGTAGT   62 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             CCCEEEEEeccccccccccccccccCc-------cccccccc
Confidence            446899999889999998888877886       78888776

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=83.25  E-value=0.56  Score=36.17  Aligned_cols=24  Identities=13%  Similarity=0.310  Sum_probs=21.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDL   30 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (329)
                      -||+|||| |.+|..+|..|...+.
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~   27 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGY   27 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCC
Confidence            36999999 9999999999988765

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.89  E-value=0.49  Score=41.65  Aligned_cols=32  Identities=31%  Similarity=0.487  Sum_probs=28.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHh------CCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIAN------GDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~------~~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||| |..|++.|..|++      .|+       +|.|+|..
T Consensus        33 ~DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl-------~VlllEK~   70 (380)
T d2gmha1          33 ADVVIVGA-GPAGLSAATRLKQLAAQHEKDL-------RVCLVEKA   70 (380)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHHHHTTCCC-------CEEEECSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHhhhhhhcCCC-------EEEEEcCC
Confidence            46999999 9999999999987      676       89999987

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.78  E-value=6  Score=33.32  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=25.9

Q ss_pred             EEE-EEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RIS-ITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~-IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ||+ |+||+  .++|.++|..|++.|.       +|.+.+..
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA-------~V~i~~~~   37 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNV-------KIIFGIWP   37 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTC-------EEEEEECG
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCC-------EEEEEeCc
Confidence            455 66752  3899999999999998       89998876

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.54  E-value=0.48  Score=37.74  Aligned_cols=32  Identities=25%  Similarity=0.343  Sum_probs=29.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ..|.|||| |..|...|..+++.|.       +|.|++.+
T Consensus         6 ~DlvVIG~-GpaGl~aA~~aa~~G~-------~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGG-GPGGYVAAIRAGQLGI-------PTVLVEGQ   37 (220)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTC-------CEEEECSS
T ss_pred             cCEEEECC-CHHHHHHHHHHHHCCC-------cEEEEecC
Confidence            56999998 9999999999999998       89999865

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.47  E-value=0.6  Score=37.42  Aligned_cols=31  Identities=26%  Similarity=0.485  Sum_probs=28.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -|+|||| |..|.+.|..+.+.|+       ++.++|..
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~-------~V~viE~~   38 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGL-------KVAIVERY   38 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-------eEEEEecc
Confidence            4899999 9999999999999998       89999976

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=82.34  E-value=0.8  Score=34.79  Aligned_cols=48  Identities=19%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhh
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIE   61 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~   61 (329)
                      +||+|+|++|++|.+....+.+.. .+      +|..+--+  ++-+.+..++.++.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f------~v~~Lsa~--~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF------RVVALVAG--KNVTRMVEQCLEFS   50 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE------EEEEEEES--SCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc------EEEEEEec--CcHHHHHHHHHHHh
Confidence            369999999999999877776652 33      56666554  23455555554443

>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Rab-22a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.84  E-value=0.94  Score=34.24  Aligned_cols=26  Identities=15%  Similarity=0.473  Sum_probs=20.3

Q ss_pred             CCEEEEEcCCCchHH-HHHHHHHhCCCC
Q psy9582           5 PVRISITGAAGQIGY-NIIFRIANGDLL   31 (329)
Q Consensus         5 ~~kI~IiGa~G~vG~-~la~~l~~~~~~   31 (329)
                      ..||+|+|. .++|. ++...|......
T Consensus         4 ~~Ki~lvG~-~~vGKTsli~rl~~~~f~   30 (167)
T d1z0ja1           4 ELKVCLLGD-TGVGKSSIMWRFVEDSFD   30 (167)
T ss_dssp             EEEEEEECC-TTSSHHHHHHHHHHSCCC
T ss_pred             eeEEEEECC-CCcCHHHHHHHHHhCCCC
Confidence            379999998 99996 677788776543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.70  E-value=0.59  Score=39.18  Aligned_cols=32  Identities=19%  Similarity=0.438  Sum_probs=29.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .-|+|||+ |..|.+.|..|++.|.       +|.|++..
T Consensus        17 ~DVlVIG~-G~aGl~aA~~la~~G~-------~V~lvEK~   48 (308)
T d1y0pa2          17 VDVVVVGS-GGAGFSAAISATDSGA-------KVILIEKE   48 (308)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC-------cEEEEecC
Confidence            35999999 9999999999999997       89999876

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.61  E-value=0.49  Score=37.97  Aligned_cols=31  Identities=23%  Similarity=0.206  Sum_probs=28.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -|+|||| |..|.+.|..+++.|+       ++.++|..
T Consensus         5 DviVIG~-GpaGl~aA~~aa~~G~-------kV~viE~~   35 (235)
T d1h6va1           5 DLIIIGG-GSGGLAAAKEAAKFDK-------KVMVLDFV   35 (235)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGCC-------CEEEECCC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-------eEEEEecc
Confidence            4899999 9999999999999998       89999965

>d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=81.14  E-value=3  Score=35.29  Aligned_cols=73  Identities=14%  Similarity=0.169  Sum_probs=45.4

Q ss_pred             CCEEEEEcC--CCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582           5 PVRISITGA--AGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK   82 (329)
Q Consensus         5 ~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~   82 (329)
                      ..||+++|-  .+++..+++..+...+..      ++++.-..    .-.......+..+.   ....+.++.+..++++
T Consensus       154 ~~~i~~vGD~~~~~v~~S~~~~~~~~~~~------~~~i~~P~----~~~~~~~~~~~~~~---~~~~~~~~~d~~~a~~  220 (310)
T d1tuga1         154 NLHVAMVGDLKYGRTVHSLTQALAKFDGN------RFYFIAPD----ALAMPQYILDMLDE---KGIAWSLHSSIEEVMA  220 (310)
T ss_dssp             SCEEEEESCTTTCHHHHHHHHHHTTSSSC------EEEEECCG----GGCCCHHHHHHHHT---TTCCEEEESCGGGTTT
T ss_pred             cceEEEEeccccCcchHHHHHHHHhccCc------eEEEeCCc----ccccchhccccccc---ccceeeeeechhhhcc
Confidence            579999997  255666666655544321      78888665    11112222333221   2235778888999999


Q ss_pred             CccEEEEe
Q psy9582          83 DANIAILI   90 (329)
Q Consensus        83 ~aDiVi~~   90 (329)
                      +||+|..+
T Consensus       221 ~aDvvy~~  228 (310)
T d1tuga1         221 EVDILYMT  228 (310)
T ss_dssp             TCSEEEEC
T ss_pred             CCceeeec
Confidence            99998865

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.93  E-value=0.75  Score=36.35  Aligned_cols=31  Identities=19%  Similarity=0.166  Sum_probs=28.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      -++|||| |..|.+.|..+...|.       ++.++|..
T Consensus         5 DviIIG~-GpaG~~aA~~aar~G~-------kV~vIEk~   35 (221)
T d3grsa1           5 DYLVIGG-GSGGLASARRAAELGA-------RAAVVESH   35 (221)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-------EEEEEecc
Confidence            4889999 9999999999999987       89999875

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.79  E-value=0.61  Score=43.03  Aligned_cols=33  Identities=12%  Similarity=0.346  Sum_probs=30.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      .||+|+|+ |.+|+.++..|+..|+ +     +++|+|.+
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GV-g-----~itivD~d   58 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGI-G-----SFTIIDGN   58 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTC-S-----EEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcC-C-----EEEEEcCC
Confidence            68999998 9999999999999886 3     89999976

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=80.66  E-value=0.66  Score=35.71  Aligned_cols=35  Identities=14%  Similarity=-0.026  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582           4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS   45 (329)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (329)
                      ...+|.|+||+|.+|...+......|.       ++...|.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga-------~Vi~~~~s   62 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGA-------KLIGTVGT   62 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC-------EEEEEESS
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCC-------eEeecccc
Confidence            346899999988899998888887786       89999998

>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Rab5a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.06  E-value=1.6  Score=32.88  Aligned_cols=113  Identities=17%  Similarity=0.224  Sum_probs=55.8

Q ss_pred             CEEEEEcCCCchHH-HHHHHHHhCCCCCCCCC---ceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582           6 VRISITGAAGQIGY-NIIFRIANGDLLGKDQP---IILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF   81 (329)
Q Consensus         6 ~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~---~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al   81 (329)
                      .||+|+|. .++|- +++..|..+.......|   .+....+...  ......   ..+.+..  .....  ......-+
T Consensus         7 ~Ki~vvG~-~~vGKTsLi~~l~~~~f~~~~~~t~~~~~~~~~~~~--~~~~~~---~~~~d~~--g~~~~--~~~~~~~~   76 (170)
T d1r2qa_           7 FKLVLLGE-SAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCL--DDTTVK---FEIWDTA--GQERY--HSLAPMYY   76 (170)
T ss_dssp             EEEEEECS-TTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEE--TTEEEE---EEEEEEC--CSGGG--GGGHHHHH
T ss_pred             EEEEEECC-CCcCHHHHHHHHHhCCCCcccccccccccccceeec--cceEEE---EEeccCC--Cchhh--hhhHHHHh
Confidence            58999998 99995 57788887654332222   1322222220  001111   1111111  00000  01122347


Q ss_pred             CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      +++|++++.-...      ..+.    ...+..+...+.+...++..++++.|-.|.
T Consensus        77 ~~~~~~ilv~d~~------~~~s----~~~~~~~~~~~~~~~~~~~~iilvgnK~Dl  123 (170)
T d1r2qa_          77 RGAQAAIVVYDIT------NEES----FARAKNWVKELQRQASPNIVIALSGNKADL  123 (170)
T ss_dssp             TTCSEEEEEEETT------CHHH----HHHHHHHHHHHHHHSCTTCEEEEEEECGGG
T ss_pred             hCcceEEEEeccc------hhhH----HHHHHHHhhhhhhccCCCceEEeecccccc
Confidence            8999998863221      1111    123344444554444578888899998885

>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Rab2b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.03  E-value=1.1  Score=34.00  Aligned_cols=51  Identities=16%  Similarity=0.223  Sum_probs=30.3

Q ss_pred             ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582          78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT  138 (329)
Q Consensus        78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~  138 (329)
                      ...++++|.+|++-....     +     .....+..+...+.++..++..++++.|-.|.
T Consensus        70 ~~~~~~~d~~ilv~d~~~-----~-----~sf~~~~~~~~~~~~~~~~~~piilv~nK~D~  120 (173)
T d2a5ja1          70 RSYYRGAAGALLVYDITR-----R-----ETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL  120 (173)
T ss_dssp             HHHHTTCSEEEEEEETTC-----H-----HHHHTHHHHHHHHHHHSCTTCEEEEEEECTTC
T ss_pred             HHHhhccCEEEEEEeecC-----h-----HHHHhHHHHHHHHHHhCCCCCeEEEEecCCch
Confidence            445788999888633211     1     11123334444555555577888899998874