Psyllid ID: psy9695

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MRGKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTETC
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHcccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHHccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccccEcccccHEEEEcccc
Coil and Loop (DISEMBL)
mrgklipnavfnvagmpkhlchvchknfssssaLQIHMrthtgdkpfrcticqkafttkgnlklipnavfnvagmpkhlchvchknfssssaLQIHMrthtgdkpfrcticqkafttkgnlkVREIEInigsqlpkkAQQHIgavegksfqakhktetc
Flexible Loop (DISEMBL)
MRGKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAfttkgnlkvREIEINIGSQLPKKAQQHIGavegksfqakhktetc
Low Complexity Region (SEG)
MRGKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTETC
Disordered region (IsUnstruct)
****LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIG****************************
Disordered Region (DISOPRED)
****L*PNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQH***********KHKTET*
Disordered Region (DISEMBL)
MRGKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE*************
Disordered Region (DISPRO)
****LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHK***C
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRGKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTETC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
Q60636	856	PR domain zinc finger pro	yes	N/A	0.748	0.139	0.385	2e-21
A6NJL1	495	Zinc finger and SCAN doma	yes	N/A	0.666	0.214	0.431	3e-21
O75626	825	PR domain zinc finger pro	no	N/A	0.748	0.144	0.385	3e-21
Q86WZ6	799	Zinc finger protein 227 O	no	N/A	0.767	0.152	0.393	2e-20
A0JNB1	787	Zinc finger protein 227 O	no	N/A	0.691	0.139	0.407	8e-20
Q8TC21	504	Zinc finger protein 596 O	no	N/A	0.666	0.210	0.440	1e-19
P13360	604	Protein glass OS=Drosophi	no	N/A	0.716	0.188	0.364	2e-19
Q24732	598	Protein glass OS=Drosophi	N/A	N/A	0.716	0.190	0.364	3e-19
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.628	0.109	0.427	3e-19
Q9UK10	706	Zinc finger protein 225 O	no	N/A	0.616	0.138	0.465	6e-19

>sp|Q60636|PRDM1_MOUSE PR domain zinc finger protein 1 OS=Mus musculus GN=Prdm1 PE=1 SV=1

 Score =  101 bits (252), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 4   KLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 63
           K +P  +    G  K+ C+VC K F   S L++H+R H+G++PF+C  C K FT   +L+
Sbjct: 591 KTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQ 650

Query: 64  LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                     G   H C VCHK FSS+S L+ H+R H+G+KP++C +C   FT   +LK+
Sbjct: 651 ---KHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKL 707

Query: 124 RE 125
            +
Sbjct: 708 HK 709

Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.
Mus musculus (taxid: 10090)

>sp|A6NJL1|ZSA5B_HUMAN Zinc finger and SCAN domain-containing protein 5B OS=Homo sapiens GN=ZSCAN5B PE=2 SV=1

 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 3/109 (2%)

Query: 15  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAG 74
            +P   C VC+K+F   S L IH R+HTGD+PF+C +C+K F    +L++  +   +   
Sbjct: 351 ALPPFACDVCNKSFKYFSQLSIHRRSHTGDRPFQCDLCRKRFLQPSDLRV--HQRVHTGE 408

Query: 75  MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            P ++C VC K F+  S LQ H R HTG++PF+C  C K F+ KGNL V
Sbjct: 409 RP-YMCDVCQKRFAHESTLQGHKRIHTGERPFKCKYCSKVFSHKGNLNV 456

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|O75626|PRDM1_HUMAN PR domain zinc finger protein 1 OS=Homo sapiens GN=PRDM1 PE=1 SV=2

 Score =  100 bits (250), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 4   KLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 63
           K +P  +    G  K+ C+VC K F   S L++H+R H+G++PF+C  C K FT   +L+
Sbjct: 560 KTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQ 619

Query: 64  LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                     G   H C VCHK FSS+S L+ H+R H+G+KP++C +C   FT   +LK+
Sbjct: 620 ---KHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKL 676

Query: 124 RE 125
            +
Sbjct: 677 HK 678

Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.

Homo sapiens (taxid: 9606)

>sp|Q86WZ6|ZN227_HUMAN Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 5/127 (3%)

Query: 14  AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA 73
            G   + C  C K F+ ++ L IH R HTG+KP++C  C K F+   NL++  N      
Sbjct: 459 TGEKPYKCEACGKGFTRNTDLHIHFRVHTGEKPYKCKECGKGFSQASNLQVHQNVH---T 515

Query: 74  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQ 133
           G  +  C  C K FS SS LQ H R HTG+KP+RC +C K F+   NLK+ ++ I+ G +
Sbjct: 516 GEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQV-IHTGEK 574

Query: 134 LPKKAQQ 140
            P K ++
Sbjct: 575 -PYKCEE 580

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A0JNB1|ZN227_BOVIN Zinc finger protein 227 OS=Bos taurus GN=ZNF227 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 3/113 (2%)

Query: 14  AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA 73
            G   + C  C K F+ ++ L IH R HTG+KP+ C  C K F+   NL++  N      
Sbjct: 447 TGEKPYRCEACGKGFTRNTDLHIHFRVHTGEKPYTCKECGKGFSQASNLQVHQNVH---T 503

Query: 74  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREI 126
           G  +  C  C K FS SS LQ H R HTG+KP+RC +C K F+   NLK+ ++
Sbjct: 504 GEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQV 556

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q8TC21|ZN596_HUMAN Zinc finger protein 596 OS=Homo sapiens GN=ZNF596 PE=2 SV=2

 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 3/109 (2%)

Query: 15  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAG 74
           G   H CH+C K F+ SS L+ H R HTG+KP+ C +C KAFT   +L+          G
Sbjct: 359 GEKPHGCHLCGKAFTESSVLKRHERIHTGEKPYECHVCGKAFTESSDLRRHERT---HTG 415

Query: 75  MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + CH+C K F+ SS L+ H RTHTG+KP+ C IC KAF    N ++
Sbjct: 416 EKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRL 464

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P13360|GLAS_DROME Protein glass OS=Drosophila melanogaster GN=gl PE=1 SV=2

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 4/118 (3%)

Query: 16  MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGM 75
           M  +LC +C K ++  S L+ H+RTH+G++P+RC  C K+F+   NL      V    G 
Sbjct: 434 MKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTA---HVRTHTGQ 490

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQ 133
               C +C + FS SS++  HMRTH+G++P+RC+ C+K+F+    L  + + I+ G +
Sbjct: 491 KPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTL-TKHLRIHSGEK 547

Transcription factor required for gene expression specific to photoreceptor cells.

Drosophila melanogaster (taxid: 7227)

>sp|Q24732|GLAS_DROVI Protein glass OS=Drosophila virilis GN=gl PE=3 SV=1

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 4/118 (3%)

Query: 16  MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGM 75
           M  +LC +C K ++  S L+ H+RTH+G++P+RC  C K+F+   NL      V    G 
Sbjct: 424 MKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTA---HVRTHTGQ 480

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQ 133
               C +C + FS SS++  HMRTH+G++P+RC+ C+K+F+    L  + + I+ G +
Sbjct: 481 KPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTL-TKHLRIHSGEK 537

Transcription factor required for gene expression specific to photoreceptor cells.

Drosophila virilis (taxid: 7244)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C K FS SS L+ H R HTG KP++C +C K F+    L+   +   +V G P + C
Sbjct: 751 CEMCGKGFSQSSRLEAHRRVHTGGKPYKCEVCTKGFSESSRLQ--AHQRVHVEGRP-YKC 807

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
             C K FS  S+LQ H R HTG+KP++C +C K F+ + NL+ 
Sbjct: 808 EQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQA 850

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UK10|ZN225_HUMAN Zinc finger protein 225 OS=Homo sapiens GN=ZNF225 PE=2 SV=2

 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C VC K F+ SS LQIH R HTG+KPF+C  C K F+ +  L +         G+  H+C
Sbjct: 206 CDVCGKEFNQSSHLQIHQRIHTGEKPFKCEQCGKGFSRRSGLYVHRKL---HTGVKPHIC 262

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
             C K F   S LQ H R HTG+KPF+C IC K+F ++ NL
Sbjct: 263 EKCGKAFIHDSQLQEHQRIHTGEKPFKCDICCKSFRSRANL 303

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
432912346	1379	PREDICTED: uncharacterized protein LOC10	0.628	0.072	0.456	5e-21
158285752	789	AGAP007389-PA [Anopheles gambiae str. PE	0.647	0.130	0.490	6e-21
432952026	590	PREDICTED: oocyte zinc finger protein Xl	0.628	0.169	0.495	6e-21
193713609	313	PREDICTED: zinc finger protein 271-like	0.641	0.325	0.457	6e-21
242019448	1486	conserved hypothetical protein [Pediculu	0.226	0.024	0.938	7e-21
193591726	536	PREDICTED: zinc finger protein 271-like	0.660	0.195	0.472	7e-21
328703908	237	PREDICTED: myoneurin-like [Acyrthosiphon	0.685	0.459	0.437	1e-20
332227695	1223	PREDICTED: sal-like protein 1, partial [	0.566	0.073	0.514	1e-20
405952060	762	Zinc finger protein 26 [Crassostrea giga	0.773	0.161	0.421	2e-20
432912348	1168	PREDICTED: zinc finger protein Xfin-like	0.672	0.091	0.436	3e-20

>gi|432912346|ref|XP_004078885.1| PREDICTED: uncharacterized protein LOC101169733 [Oryzias latipes]

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 71/103 (68%), Gaps = 3/103 (2%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C ++F++SS L +H+R+HTG+KPF C +CQK+F T   LK+         G     C
Sbjct: 345 CEICQRSFTTSSHLNVHLRSHTGEKPFSCELCQKSFLTCAELKV---HFRTHTGEKPFTC 401

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            VC K+F++SS L++HMRTHT +KPF CT+C+K+F+   +LK+
Sbjct: 402 KVCEKSFTTSSCLRVHMRTHTHEKPFTCTLCEKSFSRSSSLKI 444

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|158285752|ref|XP_308443.4| AGAP007389-PA [Anopheles gambiae str. PEST] gi|157020144|gb|EAA04381.4| AGAP007389-PA [Anopheles gambiae str. PEST]

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 3/106 (2%)

Query: 16  MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGM 75
           + KH C +CHK FSSS  L IH+R H+G+KPFRC++C K F    NL      +    G 
Sbjct: 432 LRKHECLICHKKFSSSGNLAIHIREHSGEKPFRCSVCGKGFIQSNNL---ATHMKTHTGE 488

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
             + C +C KNFS S+ L+ H+RTHTG+KP+ CTIC K F  K NL
Sbjct: 489 KPYACTICGKNFSQSNNLKTHIRTHTGEKPYACTICGKRFNQKNNL 534

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432952026|ref|XP_004084940.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Oryzias latipes]

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 3/103 (2%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C VC K+F+ SS L++HMRTHTG+KP+ C +C K+F+    LK     +    G   + C
Sbjct: 339 CEVCGKSFTQSSDLKVHMRTHTGEKPYSCKVCGKSFSQSCKLK---THMRTHTGERPYSC 395

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            VC K F S S L+IHMRTHTG+KPF C IC+K F+T  +LK+
Sbjct: 396 EVCGKGFPSISELKIHMRTHTGEKPFTCKICEKLFSTSSDLKI 438

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|193713609|ref|XP_001944284.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 3/105 (2%)

Query: 19  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKH 78
           +LC VC K+F+ +S L IH RTHTG+KP+ C +C K+F+  GNL +         G   +
Sbjct: 6   YLCDVCDKSFTYNSKLTIHRRTHTGEKPYECDVCDKSFSISGNLTIHRRT---HTGEKPY 62

Query: 79  LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            C VC K+F+ S  L IH RTHTG+KP+ C +C K+F+  GNL +
Sbjct: 63  ACDVCDKSFNESGNLTIHRRTHTGEKPYECDVCDKSFSISGNLTI 107

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242019448|ref|XP_002430173.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212515264|gb|EEB17435.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 46/49 (93%), Positives = 49/49 (100%)

Query: 75   MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            MPKHLCHVC+KNFSSSSALQIHMRTHTGDKPFRC++CQKAFTTKGNLKV
Sbjct: 1264 MPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCSVCQKAFTTKGNLKV 1312

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193591726|ref|XP_001944018.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 3/108 (2%)

Query: 14  AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA 73
            G   + C VC K+FS SS+L IH RTHTG+KP++C +C K+F+  G+LK          
Sbjct: 184 TGEKPYQCDVCDKSFSVSSSLTIHRRTHTGEKPYQCDVCDKSFSNNGDLKRHQRT---HT 240

Query: 74  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           G   H C VC K+FS SS+L  H RTHTG+KP++C +C K+FT    L
Sbjct: 241 GEKSHQCDVCDKSFSVSSSLTKHRRTHTGEKPYQCDVCDKSFTVSSQL 288

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703908|ref|XP_003242349.1| PREDICTED: myoneurin-like [Acyrthosiphon pisum]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 3/112 (2%)

Query: 14  AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA 73
            G   + C VC++ F  +  L++HMRTHTGDKP+ C +C K F   G+LK          
Sbjct: 125 TGEKPYKCDVCNREFFDAPTLKVHMRTHTGDKPYACDLCDKRFNKTGDLK---RHTRTHT 181

Query: 74  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVRE 125
           G   + C VCH+ FS ++ L+IHMRTHT DKP++C  C+K F+  GN K  E
Sbjct: 182 GEKPYKCDVCHREFSLAANLKIHMRTHTKDKPYKCDFCEKLFSFTGNFKRHE 233

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332227695|ref|XP_003263028.1| PREDICTED: sal-like protein 1, partial [Nomascus leucogenys]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 15/105 (14%)

Query: 21   CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
            C +C K F+  SAL IH R+HT ++PF CT+C   F+TKGNLK             +H+ 
Sbjct: 987  CDICGKTFACQSALDIHYRSHTKERPFICTVCNCGFSTKGNLK-------------QHML 1033

Query: 81   --HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               +       SSALQIH RTHTG+KPF CTIC +AFTTKGNLKV
Sbjct: 1034 THQMQDXXXXXSSALQIHERTHTGEKPFACTICGRAFTTKGNLKV 1078

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405952060|gb|EKC19913.1| Zinc finger protein 26 [Crassostrea gigas]

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C    SS  AL +HMR+HTG++PF+C+IC K+FTTKGNL+   +  ++  G+   +C
Sbjct: 427 CTECGVKMSSFGALDVHMRSHTGERPFKCSICPKSFTTKGNLQR--HETYH-QGLRPFVC 483

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQ 140
            VC  +F+   +L++HMR HTG++PF C  C KAFT  G L V E       ++ +    
Sbjct: 484 GVCEYSFTEKKSLKVHMRIHTGERPFVCKTCGKAFTQSGPLVVHE-------KIHENVYP 536

Query: 141 HIGAVEGKSFQAK 153
           H+  V GKSF+ K
Sbjct: 537 HLCDVCGKSFRQK 549

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|432912348|ref|XP_004078886.1| PREDICTED: zinc finger protein Xfin-like [Oryzias latipes]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 3/110 (2%)

Query: 14   AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA 73
             G   + C VC K F+ +S+LQ+HMR HTG++PF C +C K+F    +LK+    +    
Sbjct: 969  TGEKPYSCKVCEKQFAQNSSLQVHMRIHTGERPFTCEVCGKSFIRGSDLKV---HMRTHT 1025

Query: 74   GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            G   + C VC K+F+ +S+L +HMR HTG++PF C +C K+FTT  +LKV
Sbjct: 1026 GEKPYSCKVCEKHFAHNSSLNVHMRIHTGERPFTCEVCGKSFTTGSDLKV 1075

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
FB|FBgn0000287	1267	salr "spalt-related" [Drosophi	0.295	0.037	0.872	4.2e-33
WB|WBGene00004773	744	sem-4 [Caenorhabditis elegans	0.308	0.065	0.755	1.4e-30
UNIPROTKB|H3BSM9	1154	SALL1 "Sal-like protein 1" [Ho	0.490	0.067	0.471	1.5e-16
MGI|MGI:1889585	1322	Sall1 "sal-like 1 (Drosophila)	0.490	0.059	0.471	2.1e-16
UNIPROTKB|F1NN86	1308	SALL1 "Uncharacterized protein	0.490	0.059	0.471	2e-16
UNIPROTKB|E1BIR3	1316	SALL1 "Uncharacterized protein	0.490	0.059	0.471	2.1e-16
UNIPROTKB|J9P7U4	1324	SALL1 "Uncharacterized protein	0.490	0.058	0.471	2.1e-16
UNIPROTKB|Q9NSC2	1324	SALL1 "Sal-like protein 1" [Ho	0.490	0.058	0.471	2.1e-16
UNIPROTKB|F1REZ7	1326	SALL1 "Uncharacterized protein	0.490	0.058	0.471	2.1e-16
ZFIN|ZDB-GENE-020228-3	1217	sall1b "sal-like 1b (Drosophil	0.433	0.056	0.549	4.7e-30

FB|FBgn0000287 salr "spalt-related" [Drosophila melanogaster (taxid:7227)]

 Score = 238 (88.8 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
 Identities = 41/47 (87%), Positives = 44/47 (93%)

Query:    77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
             KH CHVC +NFSSSSALQIHMRTHTGDKPF+C +CQKAFTTKGNLKV
Sbjct:  1039 KHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKV 1085

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=TAS

GO:0048098 "antennal joint development" evidence=IMP

GO:0007605 "sensory perception of sound" evidence=IGI;IMP

GO:0007423 "sensory organ development" evidence=IMP

GO:0030539 "male genitalia development" evidence=IMP

GO:0008584 "male gonad development" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

WB|WBGene00004773 sem-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 209 (78.6 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
 Identities = 37/49 (75%), Positives = 43/49 (87%)

Query:    75 MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
             + KH C VC K+FSSSSALQIHMRTHTGDKPF+C +C +AFTT+GNLKV
Sbjct:   586 LSKHQCGVCFKHFSSSSALQIHMRTHTGDKPFKCDMCGRAFTTRGNLKV 634

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0018991 "oviposition" evidence=IMP

GO:0048333 "mesodermal cell differentiation" evidence=IMP

GO:0042692 "muscle cell differentiation" evidence=IMP

GO:0014016 "neuroblast differentiation" evidence=IMP

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0060290 "transdifferentiation" evidence=IMP

UNIPROTKB|H3BSM9 SALL1 "Sal-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 211 (79.3 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   611 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 666

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   667 VQHSCPICQKKFTNAVVLQQHIRMHMG 693

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000792 "heterochromatin" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0003281 "ventricular septum development" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0021553 "olfactory nerve development" evidence=IEA

GO:0021772 "olfactory bulb development" evidence=IEA

GO:0031129 "inductive cell-cell signaling" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0035137 "hindlimb morphogenesis" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0072092 "ureteric bud invasion" evidence=IEA

GO:2000177 "regulation of neural precursor cell proliferation" evidence=IEA

MGI|MGI:1889585 Sall1 "sal-like 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 211 (79.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   707 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 762

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   763 VQHSCPICQKKFTNAVVLQQHIRMHMG 789

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;IGI;IMP;IDA

GO:0000792 "heterochromatin" evidence=ISO;IDA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IPI

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IDA

GO:0001158 "enhancer sequence-specific DNA binding" evidence=IDA

GO:0001657 "ureteric bud development" evidence=IMP

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IMP

GO:0001822 "kidney development" evidence=ISO

GO:0001843 "neural tube closure" evidence=IGI

GO:0003281 "ventricular septum development" evidence=IGI;IMP

GO:0003337 "mesenchymal to epithelial transition involved in metanephros morphogenesis" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0004407 "histone deacetylase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IC;ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007507 "heart development" evidence=ISO

GO:0008013 "beta-catenin binding" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010369 "chromocenter" evidence=ISO

GO:0016581 "NuRD complex" evidence=IDA

GO:0021553 "olfactory nerve development" evidence=IMP

GO:0021772 "olfactory bulb development" evidence=IMP

GO:0021889 "olfactory bulb interneuron differentiation" evidence=IMP

GO:0021915 "neural tube development" evidence=IGI

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISO

GO:0031129 "inductive cell-cell signaling" evidence=IMP

GO:0035136 "forelimb morphogenesis" evidence=IGI

GO:0035137 "hindlimb morphogenesis" evidence=IGI

GO:0042473 "outer ear morphogenesis" evidence=ISO

GO:0042733 "embryonic digit morphogenesis" evidence=ISO;IMP

GO:0045666 "positive regulation of neuron differentiation" evidence=IMP

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IGI

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IMP;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IMP;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048566 "embryonic digestive tract development" evidence=ISO

GO:0060173 "limb development" evidence=ISO

GO:0061034 "olfactory bulb mitral cell layer development" evidence=ISO

GO:0072073 "kidney epithelium development" evidence=IMP

GO:0072092 "ureteric bud invasion" evidence=IMP

GO:2000177 "regulation of neural precursor cell proliferation" evidence=IMP

GO:2000381 "negative regulation of mesoderm development" evidence=IMP

GO:2000384 "negative regulation of ectoderm development" evidence=IMP

UNIPROTKB|F1NN86 SALL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 211 (79.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   693 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 748

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   749 VQHSCPICQKKFTNAVVLQQHIRMHMG 775

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000792 "heterochromatin" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0003281 "ventricular septum development" evidence=IEA

GO:0003337 "mesenchymal to epithelial transition involved in metanephros morphogenesis" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0008406 "gonad development" evidence=IEA

GO:0010369 "chromocenter" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0021553 "olfactory nerve development" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0030325 "adrenal gland development" evidence=IEA

GO:0031129 "inductive cell-cell signaling" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0035137 "hindlimb morphogenesis" evidence=IEA

GO:0042473 "outer ear morphogenesis" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0048566 "embryonic digestive tract development" evidence=IEA

GO:0061034 "olfactory bulb mitral cell layer development" evidence=IEA

GO:0072092 "ureteric bud invasion" evidence=IEA

GO:2000177 "regulation of neural precursor cell proliferation" evidence=IEA

UNIPROTKB|E1BIR3 SALL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   700 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 755

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   756 VQHSCPICQKKFTNAVVLQQHIRMHMG 782

GO:2000177 "regulation of neural precursor cell proliferation" evidence=IEA

GO:0072092 "ureteric bud invasion" evidence=IEA

GO:0061034 "olfactory bulb mitral cell layer development" evidence=IEA

GO:0048566 "embryonic digestive tract development" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0042473 "outer ear morphogenesis" evidence=IEA

GO:0035137 "hindlimb morphogenesis" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0031129 "inductive cell-cell signaling" evidence=IEA

GO:0030325 "adrenal gland development" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0021553 "olfactory nerve development" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0010369 "chromocenter" evidence=IEA

GO:0008406 "gonad development" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003337 "mesenchymal to epithelial transition involved in metanephros morphogenesis" evidence=IEA

GO:0003281 "ventricular septum development" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0000792 "heterochromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P7U4 SALL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 211 (79.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   708 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 763

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   764 VQHSCPICQKKFTNAVVLQQHIRMHMG 790

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9NSC2 SALL1 "Sal-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 211 (79.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   708 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 763

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   764 VQHSCPICQKKFTNAVVLQQHIRMHMG 790

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0035137 "hindlimb morphogenesis" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IEA

GO:2000177 "regulation of neural precursor cell proliferation" evidence=IEA

GO:0003337 "mesenchymal to epithelial transition involved in metanephros morphogenesis" evidence=IEP

GO:0008406 "gonad development" evidence=IEP

GO:0007507 "heart development" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0042733 "embryonic digit morphogenesis" evidence=IMP

GO:0003677 "DNA binding" evidence=NAS

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=ISS

GO:0021553 "olfactory nerve development" evidence=ISS

GO:0072092 "ureteric bud invasion" evidence=ISS

GO:0016581 "NuRD complex" evidence=ISS

GO:0001657 "ureteric bud development" evidence=ISS

GO:0001822 "kidney development" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0010369 "chromocenter" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0060173 "limb development" evidence=IMP

GO:0000792 "heterochromatin" evidence=IDA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IDA

GO:0008013 "beta-catenin binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0021983 "pituitary gland development" evidence=IEP

GO:0030325 "adrenal gland development" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0042473 "outer ear morphogenesis" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0003281 "ventricular septum development" evidence=ISS

GO:0021889 "olfactory bulb interneuron differentiation" evidence=ISS

GO:0004407 "histone deacetylase activity" evidence=ISS

GO:0031129 "inductive cell-cell signaling" evidence=ISS

GO:0048566 "embryonic digestive tract development" evidence=IMP

GO:0072073 "kidney epithelium development" evidence=ISS

GO:0061034 "olfactory bulb mitral cell layer development" evidence=IMP

GO:0016575 "histone deacetylation" evidence=ISS

UNIPROTKB|F1REZ7 SALL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 211 (79.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 41/87 (47%), Positives = 57/87 (65%)

Query:    21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNV-AGMP--- 76
             C +CH+  S  SAL++H RTHTG++PF+C IC +AFTTKGNLK      ++V   MP   
Sbjct:   709 CIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLK----THYSVHRAMPPLR 764

Query:    77 -KHLCHVCHKNFSSSSALQIHMRTHTG 102
              +H C +C K F+++  LQ H+R H G
Sbjct:   765 VQHSCPICQKKFTNAVVLQQHIRMHMG 791

GO:0021553 "olfactory nerve development" evidence=IEA

GO:0016581 "NuRD complex" evidence=IEA

GO:0010369 "chromocenter" evidence=IEA

GO:0008406 "gonad development" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003337 "mesenchymal to epithelial transition involved in metanephros morphogenesis" evidence=IEA

GO:0003281 "ventricular septum development" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0000792 "heterochromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:2000177 "regulation of neural precursor cell proliferation" evidence=IEA

GO:0072092 "ureteric bud invasion" evidence=IEA

GO:0061034 "olfactory bulb mitral cell layer development" evidence=IEA

GO:0048566 "embryonic digestive tract development" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0042473 "outer ear morphogenesis" evidence=IEA

GO:0035137 "hindlimb morphogenesis" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0031129 "inductive cell-cell signaling" evidence=IEA

GO:0030325 "adrenal gland development" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

ZFIN|ZDB-GENE-020228-3 sall1b "sal-like 1b (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
 Identities = 39/71 (54%), Positives = 50/71 (70%)

Query:    77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPK 136
             +H C  C K FSSSSALQIH RTHTG+KPF C IC +AFTTKGNLKV  +  ++ S  P 
Sbjct:  1049 QHFCQTCGKTFSSSSALQIHERTHTGEKPFACNICGRAFTTKGNLKVH-MGTHMWSSSPA 1107

Query:   137 KAQQHIGAVEG 147
             +  + + +V+G
Sbjct:  1108 RRGRKL-SVDG 1117

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	159
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	2e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	2e-05

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 14/26 (53%), Positives = 22/26 (84%)

Query: 33 ALQIHMRTHTGDKPFRCTICQKAFTT 58
           L+ HMRTHTG+KP++C +C K+F++
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 14/26 (53%), Positives = 22/26 (84%)

Query: 92  ALQIHMRTHTGDKPFRCTICQKAFTT 117
            L+ HMRTHTG+KP++C +C K+F++
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.88
KOG1074|consensus	958		99.8
KOG1074|consensus	958		99.7
KOG3576|consensus	267		99.67
KOG3608|consensus	467		99.67
KOG3608|consensus	467		99.62
KOG3623|consensus	1007		99.61
KOG3576|consensus	267		99.6
KOG3623|consensus	1007		99.59
PHA00733	128	hypothetical protein	99.31
PHA02768	55	hypothetical protein; Provisional	99.18
PLN03086	567	PRLI-interacting factor K; Provisional	99.14
PLN03086	567	PRLI-interacting factor K; Provisional	99.11
PHA02768	55	hypothetical protein; Provisional	99.02
PHA00733	128	hypothetical protein	99.0
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.97
PHA00616	44	hypothetical protein	98.52
KOG3993|consensus	500		98.52
PHA00616	44	hypothetical protein	98.5
PHA00732	79	hypothetical protein	98.49
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.45
PHA00732	79	hypothetical protein	98.32
KOG3993|consensus	500		98.3
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.13
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.08
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.87
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.82
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.8
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.75
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.68
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.5
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.47
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.41
PRK04860	160	hypothetical protein; Provisional	97.34
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.12
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.97
smart00355	26	ZnF_C2H2 zinc finger.	96.94
PRK04860	160	hypothetical protein; Provisional	96.92
smart00355	26	ZnF_C2H2 zinc finger.	96.9
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.5
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.2
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.16
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.93
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.86
COG4049	65	Uncharacterized protein containing archaeal-type C	95.6
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	95.48
KOG1146|consensus	1406		95.15
KOG2231|consensus	669		95.12
PHA00626	59	hypothetical protein	94.66
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.33
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.33
KOG2893|consensus	341		93.9
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	93.37
COG4049	65	Uncharacterized protein containing archaeal-type C	93.36
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.67
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	92.58
COG5048	467	FOG: Zn-finger [General function prediction only]	92.44
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	92.02
KOG2186|consensus	276		91.99
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	91.96
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	91.84
COG5048	467	FOG: Zn-finger [General function prediction only]	91.36
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	90.94
KOG2893|consensus	341		90.92
KOG2482|consensus	423		90.15
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	90.09
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	90.09
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.63
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	89.52
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	88.92
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	88.86
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	88.79
COG1592	166	Rubrerythrin [Energy production and conversion]	88.64
KOG1146|consensus	1406		88.15
smart00440	40	ZnF_C2C2 C2C2 Zinc finger. Nucleic-acid-binding mo	87.73
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.58
PF01096	39	TFIIS_C: Transcription factor S-II (TFIIS); InterP	87.12
PF14446	54	Prok-RING_1: Prokaryotic RING finger family 1	87.06
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.2
KOG4173|consensus	253		86.19
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	85.56
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	84.79
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	84.69
KOG4173|consensus	253		84.56
PF00301	47	Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubred	84.02
cd00730	50	rubredoxin Rubredoxin; nonheme iron binding domain	83.65
PRK06266	178	transcription initiation factor E subunit alpha; V	83.22
PF14353	128	CpXC: CpXC protein	83.11
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	82.45
PRK06266	178	transcription initiation factor E subunit alpha; V	81.03

>KOG2462|consensus

Probab=99.97  E-value=4.1e-32  Score=179.09  Aligned_cols=133  Identities=36%  Similarity=0.617  Sum_probs=120.5

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHhhc---CCCccccccccccccCccccccccccccccCCCCCccCcccccccCC
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRTHT---GDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSS   89 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~---~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~   89 (159)
                      ......|+|+.|++.+.+.++|..|...|.   ..+.+.|+.|++.+..-..|.+   +++.|+  .+.+|..||+.|..
T Consensus       125 ~~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkM---HirTH~--l~c~C~iCGKaFSR  199 (279)
T KOG2462|consen  125 AAKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKM---HIRTHT--LPCECGICGKAFSR  199 (279)
T ss_pred             cccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhh---HhhccC--CCcccccccccccc
Confidence            334556999999999999999999999885   4677999999999999999987   444444  67999999999999


Q ss_pred             hHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695          90 SSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus        90 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      +.-|+.|+++|+|||||.|+.|+++|..+++|+.|| ++|.+.      +.|+|+.|+|+|...+.|.
T Consensus       200 PWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm-QTHS~~------K~~qC~~C~KsFsl~SyLn  260 (279)
T KOG2462|consen  200 PWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM-QTHSDV------KKHQCPRCGKSFALKSYLN  260 (279)
T ss_pred             hHHhhcccccccCCCCccCCcccchhcchHHHHHHH-HhhcCC------ccccCcchhhHHHHHHHHH
Confidence            999999999999999999999999999999999999 999999      9999999999999988764

>KOG2462|consensus

Probab=99.88  E-value=1.3e-23  Score=139.06  Aligned_cols=105  Identities=28%  Similarity=0.494  Sum_probs=98.7

Q ss_pred             CCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCcee
Q psy9695          44 DKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV  123 (159)
Q Consensus        44 ~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  123 (159)
                      ...|.|.+||+.+.+.+.|.+|.+.++.....+.+.|+.|++.|.+...|..|+++|+  -+.+|++|||+|.+.+.|+.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            4469999999999999999998888777777889999999999999999999999996  58999999999999999999


Q ss_pred             eehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695         124 REIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus       124 H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      |+ ++|+|+      +||.|+.|+++|..+++|+
T Consensus       206 Hi-RTHTGE------KPF~C~hC~kAFADRSNLR  232 (279)
T KOG2462|consen  206 HI-RTHTGE------KPFSCPHCGKAFADRSNLR  232 (279)
T ss_pred             cc-ccccCC------CCccCCcccchhcchHHHH
Confidence            99 999999      9999999999999999986

>KOG1074|consensus

Probab=99.80  E-value=5.5e-20  Score=137.13  Aligned_cols=77  Identities=40%  Similarity=0.724  Sum_probs=67.9

Q ss_pred             ccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch---hhchhhhhcc
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA---VEGKSFQAKH  154 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~---~C~~~f~~~~  154 (159)
                      -.|..|.+++.-.+.|+-|.+.|+|||||+|.+||++|+.+.+|+.|| .+|-.. .+.+ -+|.|+   +|-+.|...-
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~-p~~R-~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAK-PPAR-VQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccC-cccc-ccccCCchhhhcccccccc
Confidence            559999999999999999999999999999999999999999999999 998765 2222 789999   9999998766


Q ss_pred             ccc
Q psy9695         155 KTE  157 (159)
Q Consensus       155 ~l~  157 (159)
                      .|.
T Consensus       683 ~lp  685 (958)
T KOG1074|consen  683 TLP  685 (958)
T ss_pred             ccc
Confidence            553

>KOG1074|consensus

Probab=99.70  E-value=3.8e-18  Score=127.47  Aligned_cols=45  Identities=16%  Similarity=0.436  Sum_probs=32.6

Q ss_pred             ccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695         106 FRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus       106 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      ..|.+||+.|...+.|..|+ ++|.++      ++|.|..|++.|.++.+|+
T Consensus       880 h~C~vCgk~FsSSsALqiH~-rTHtg~------KPF~C~fC~~aFttrgnLK  924 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHM-RTHTGP------KPFFCHFCEEAFTTRGNLK  924 (958)
T ss_pred             hhhccchhcccchHHHHHhh-hcCCCC------CCccchhhhhhhhhhhhhh
Confidence            45777777777777777777 777777      6777777777777776653

>KOG3576|consensus

Probab=99.67  E-value=1.2e-18  Score=110.83  Aligned_cols=104  Identities=28%  Similarity=0.560  Sum_probs=83.7

Q ss_pred             CCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCcee
Q psy9695          44 DKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV  123 (159)
Q Consensus        44 ~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  123 (159)
                      ...|.|.+|++.|.-..-|.+   ++.-|...+.+.|..||+.|....+|.+|.++|+|.+||+|..|+++|+++.+|..
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnr---h~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNR---HLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHH---HhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            345889999998887777766   45557777789999999999998999999999999999999999999999999999


Q ss_pred             eehhhccCCC----CCcccccccchhhchhh
Q psy9695         124 REIEINIGSQ----LPKKAQQHIGAVEGKSF  150 (159)
Q Consensus       124 H~~~~h~~~~----~~~~~~~~~C~~C~~~f  150 (159)
                      |.+++|.-..    ...+.+.|.|..||..-
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~  222 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTS  222 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCC
Confidence            9967665321    11344789999998653

>KOG3608|consensus

Probab=99.67  E-value=3.7e-18  Score=116.81  Aligned_cols=146  Identities=15%  Similarity=0.315  Sum_probs=93.1

Q ss_pred             ccCCccccccCCCCcccCcccccccCChHHHHHHHHhhc--CCCc--------------------------ccccccccc
Q psy9695           4 KLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHT--GDKP--------------------------FRCTICQKA   55 (159)
Q Consensus         4 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~--~~~~--------------------------~~c~~c~~~   55 (159)
                      ..+.++.+.|++++...|+.||..|++...|-.|++..+  ...+                          |+|+.|..+
T Consensus       193 ~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmt  272 (467)
T KOG3608|consen  193 YRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMT  272 (467)
T ss_pred             HHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccC
Confidence            345667788888888888888888888888888875433  2334                          444555544


Q ss_pred             ccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc--ccccccccCCceeeehhhccCCC
Q psy9695          56 FTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQ  133 (159)
Q Consensus        56 ~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~  133 (159)
                      ....++|..|+  +-.|...+||+|+.|+..+.+.+.|..|...|. +..|+|..  |..+|.+..++.+|++..|.|..
T Consensus       273 c~~~ssL~~H~--r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~n  349 (467)
T KOG3608|consen  273 CSSASSLTTHI--RYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNN  349 (467)
T ss_pred             CCChHHHHHHH--HhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCC
Confidence            44444444432  123444566777777766666666777766665 55566655  77777777777777755555542


Q ss_pred             CCcccccccchhhchhhhhcccc
Q psy9695         134 LPKKAQQHIGAVEGKSFQAKHKT  156 (159)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l  156 (159)
                      .    -+|.|-.|++.|.+-..|
T Consensus       350 p----~~Y~CH~Cdr~ft~G~~L  368 (467)
T KOG3608|consen  350 P----ILYACHCCDRFFTSGKSL  368 (467)
T ss_pred             C----CceeeecchhhhccchhH
Confidence            2    577788887777765544

>KOG3608|consensus

Probab=99.62  E-value=1.8e-16  Score=108.67  Aligned_cols=132  Identities=23%  Similarity=0.432  Sum_probs=114.5

Q ss_pred             CcccCcccccccCChHHHHHHHHh-hcCCCccccccccccccCccccccccccccccCCCCCccCcc--cccccCChHHH
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRT-HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--CHKNFSSSSAL   93 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~-~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l   93 (159)
                      ..|+|+.|+++....++|..|++. |..++||+|..|...+...++|..|..   .|. +..|.|..  |..++.+...+
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~---~HS-~~~y~C~h~~C~~s~r~~~q~  337 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ---VHS-KTVYQCEHPDCHYSVRTYTQM  337 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH---hcc-ccceecCCCCCcHHHHHHHHH
Confidence            458999999999999999999965 778999999999999999999988543   344 56799998  99999999999


Q ss_pred             HHHHHHcc-C--CCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhc
Q psy9695          94 QIHMRTHT-G--DKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAK  153 (159)
Q Consensus        94 ~~H~~~h~-~--~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~  153 (159)
                      .+|.+.++ +  +.+|.|..|++.|++..+|.+|+ ...++.++|.+...|....|...|...
T Consensus       338 ~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL-~kkH~f~~PsGh~RFtYk~~edG~mRL  399 (467)
T KOG3608|consen  338 RRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHL-MKKHGFRLPSGHKRFTYKVDEDGFMRL  399 (467)
T ss_pred             HHHHHHhccCCCCCceeeecchhhhccchhHHHHH-HHhhcccCCCCCCceeeeeccCceeee
Confidence            99999765 4  45699999999999999999999 767777899999999999998888654

>KOG3623|consensus

Probab=99.61  E-value=1.9e-16  Score=117.17  Aligned_cols=112  Identities=24%  Similarity=0.525  Sum_probs=94.5

Q ss_pred             CCcccCcccccccCChHHHHHHHHhh--cCCCccccccccccccCccccccccccccccC----------CCCCccCccc
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTH--TGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA----------GMPKHLCHVC   83 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~--~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~----------~~~~~~C~~C   83 (159)
                      ....+|+.|++.+.....+..|+...  ..+..|.|..|..+|.+..-|.+|+..+....          .-+.|+|.+|
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtEC  287 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTEC  287 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccccccc
Confidence            34489999999999999999998653  35667999999999999998887664332211          1246999999


Q ss_pred             ccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehh
Q psy9695          84 HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIE  127 (159)
Q Consensus        84 ~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  127 (159)
                      ++.|.....|..|.++|.||+||.|+.|+|.|...+++..||-.
T Consensus       288 gKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  288 GKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             chhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            99999999999999999999999999999999999999999933

>KOG3576|consensus

Probab=99.60  E-value=1.3e-16  Score=101.63  Aligned_cols=119  Identities=23%  Similarity=0.408  Sum_probs=102.6

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccC
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS   88 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~   88 (159)
                      ..-+..+...|.|.+|++.|.-.-.|..|+.-|...+.+.|..||+.|...-+|++   +.+.|+|.+||.|..|+++|.
T Consensus       108 t~gsssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkr---h~rthtgvrpykc~~c~kaft  184 (267)
T KOG3576|consen  108 TIGSSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKR---HTRTHTGVRPYKCSLCEKAFT  184 (267)
T ss_pred             cccCCCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhh---hhccccCccccchhhhhHHHH
Confidence            33444556779999999999999999999999999999999999999999999988   778899999999999999999


Q ss_pred             ChHHHHHHHHHccC-----------CCCccCCcccccccccCCceeeehhhcc
Q psy9695          89 SSSALQIHMRTHTG-----------DKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        89 ~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      ..-.|..|.+.-++           ++.|.|..||..-.....+..|.+..|.
T Consensus       185 qrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  185 QRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             hhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            99899999775443           4679999999988888888888844443

>KOG3623|consensus

Probab=99.59  E-value=2.6e-16  Score=116.48  Aligned_cols=76  Identities=28%  Similarity=0.498  Sum_probs=67.6

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhh
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQ  151 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~  151 (159)
                      .+....|.|+.|+++|.-.+.|.+|+..|+|.+||+|.+|.|+|...-.|..|+ +.|.|+      +||.|+.|+|+|.
T Consensus       889 kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHk-RLHSGE------KPfQCdKClKRFS  961 (1007)
T KOG3623|consen  889 KTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHK-RLHSGE------KPFQCDKCLKRFS  961 (1007)
T ss_pred             cCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhh-hhccCC------Ccchhhhhhhhcc
Confidence            344557999999999988899999999999999999999999999999999999 999999      8999999999997


Q ss_pred             hcc
Q psy9695         152 AKH  154 (159)
Q Consensus       152 ~~~  154 (159)
                      ...
T Consensus       962 HSG  964 (1007)
T KOG3623|consen  962 HSG  964 (1007)
T ss_pred             ccc
Confidence            654

>PHA00733 hypothetical protein

Probab=99.31  E-value=5.6e-13  Score=81.44  Aligned_cols=97  Identities=16%  Similarity=0.239  Sum_probs=73.2

Q ss_pred             HHHHHHHHhhcCCCccccccccccccCccccccc--cccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          32 SALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLI--PNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        32 ~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~--~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      .+|..+-.....++++.|.+|...+.....+..+  ........+..+|.|+.|++.|.+...|..|++.+  +.+|.|+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            3344333333446779999999988887777653  11122344577899999999999999999999976  4579999


Q ss_pred             cccccccccCCceeeehhhcc
Q psy9695         110 ICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       110 ~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      +|+++|.....|..|+...|.
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999955554

>PHA02768 hypothetical protein; Provisional

Probab=99.18  E-value=2e-11  Score=62.29  Aligned_cols=46  Identities=15%  Similarity=0.390  Sum_probs=41.7

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceee
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVR  124 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  124 (159)
                      .|.|+.||+.|...+.|..|++.|+  ++|+|..|++.|.+.+.|..-
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~~   50 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIEI   50 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEEE
Confidence            5899999999999999999999998  799999999999988888643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.14  E-value=7.3e-11  Score=87.50  Aligned_cols=92  Identities=18%  Similarity=0.334  Sum_probs=54.3

Q ss_pred             cccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccc---------
Q psy9695          47 FRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT---------  117 (159)
Q Consensus        47 ~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~---------  117 (159)
                      +.|+.|+..|. ...+..|..   .++  .++.|+ |+..+ ....|..|...|..++++.|..|++.|..         
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~---~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMK---VFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHH---hcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            46777776664 344444322   121  456777 77544 44667777777777777777777776642         


Q ss_pred             -cCCceeeehhhccCCCCCcccccccchhhchhhhhcc
Q psy9695         118 -KGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKH  154 (159)
Q Consensus       118 -~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~  154 (159)
                       .+.|..|. ... +.      +++.|..|++.+..++
T Consensus       526 ~~s~Lt~HE-~~C-G~------rt~~C~~Cgk~Vrlrd  555 (567)
T PLN03086        526 RLRGMSEHE-SIC-GS------RTAPCDSCGRSVMLKE  555 (567)
T ss_pred             hhhhHHHHH-Hhc-CC------cceEccccCCeeeehh
Confidence             23566666 443 44      5677777777665543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.11  E-value=1.6e-11  Score=90.88  Aligned_cols=62  Identities=18%  Similarity=0.400  Sum_probs=39.0

Q ss_pred             ccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhh
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQ  151 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~  151 (159)
                      +.|+.|++.|. ...|..|+..++  +++.|+ ||+.+ ....|..|+ .+|...      +++.|+.|++.|.
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~-~thCp~------Kpi~C~fC~~~v~  515 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQ-ASTCPL------RLITCRFCGDMVQ  515 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhh-hccCCC------CceeCCCCCCccc
Confidence            46667766664 455666666653  566676 76543 446666666 666666      6677777766663

>PHA02768 hypothetical protein; Provisional

Probab=99.02  E-value=2.8e-11  Score=61.79  Aligned_cols=43  Identities=7%  Similarity=0.108  Sum_probs=39.0

Q ss_pred             CccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhcccc
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKT  156 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  156 (159)
                      .|.|+.||+.|+..+.|..|+ ++|.        ++|+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~-r~H~--------k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHL-RKHN--------TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHH-HhcC--------CcccCCcccceeccccee
Confidence            489999999999999999999 8888        368999999999987765

>PHA00733 hypothetical protein

Probab=99.00  E-value=2e-11  Score=74.59  Aligned_cols=76  Identities=18%  Similarity=0.277  Sum_probs=59.9

Q ss_pred             CCCCCccCcccccccCChHHHHHHHH-----HccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhc
Q psy9695          73 AGMPKHLCHVCHKNFSSSSALQIHMR-----THTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEG  147 (159)
Q Consensus        73 ~~~~~~~C~~C~~~~~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~  147 (159)
                      ..++++.|..|...|..+..|..+..     .+.+++||.|+.||+.|...+.|..|+ +.|.        .+|.|+.|+
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h~--------~~~~C~~Cg  106 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHI-RYTE--------HSKVCPVCG  106 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHH-hcCC--------cCccCCCCC
Confidence            34567899999988777666555411     234588999999999999999999999 6652        469999999


Q ss_pred             hhhhhccccc
Q psy9695         148 KSFQAKHKTE  157 (159)
Q Consensus       148 ~~f~~~~~l~  157 (159)
                      ++|...+.|.
T Consensus       107 K~F~~~~sL~  116 (128)
T PHA00733        107 KEFRNTDSTL  116 (128)
T ss_pred             CccCCHHHHH
Confidence            9999887764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.97  E-value=3.2e-10  Score=49.71  Aligned_cols=26  Identities=54%  Similarity=1.170  Sum_probs=22.0

Q ss_pred             HHHHHHHHccCCCCccCCcccccccc
Q psy9695          92 ALQIHMRTHTGDKPFRCTICQKAFTT  117 (159)
Q Consensus        92 ~l~~H~~~h~~~~~~~C~~C~~~f~~  117 (159)
                      +|..|++.|++++||.|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47789999999999999999998863

...

>PHA00616 hypothetical protein

Probab=98.52  E-value=4.9e-08  Score=47.58  Aligned_cols=34  Identities=12%  Similarity=0.180  Sum_probs=23.2

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      ||.|+.||+.|...+.|..|.+.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4667777777777777777777777776666654

>KOG3993|consensus

Probab=98.52  E-value=9.4e-08  Score=67.90  Aligned_cols=77  Identities=17%  Similarity=0.138  Sum_probs=51.2

Q ss_pred             CCCccCcccccccCChHHHHHHHHHccCC----------------------------------------------CCccC
Q psy9695          75 MPKHLCHVCHKNFSSSSALQIHMRTHTGD----------------------------------------------KPFRC  108 (159)
Q Consensus        75 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~----------------------------------------------~~~~C  108 (159)
                      ...|.|..|++.|.+...|+.|+.+|...                                              ....+
T Consensus       354 ~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~p  433 (500)
T KOG3993|consen  354 SGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELP  433 (500)
T ss_pred             CceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCC
Confidence            34689999999999999999997765521                                              01235


Q ss_pred             CcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhcccccC
Q psy9695         109 TICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTET  158 (159)
Q Consensus       109 ~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  158 (159)
                      ++||..+..+..-..+. +.-..+      +.|.|.+|.-.|-+.-+|+|
T Consensus       434 p~~~~ppsss~~sgg~~-rlg~~~------q~f~~ky~~atfyss~~ltr  476 (500)
T KOG3993|consen  434 PYDGSPPSSSGSSGGYG-RLGIAE------QGFTCKYCPATFYSSPGLTR  476 (500)
T ss_pred             CCCCCCcccCCCCCccc-cccchh------hccccccchHhhhcCcchHh
Confidence            55665555544444444 333333      67888899888888887764

>PHA00616 hypothetical protein

Probab=98.50  E-value=6.7e-08  Score=47.09  Aligned_cols=34  Identities=12%  Similarity=0.180  Sum_probs=31.7

Q ss_pred             cccCcccccccCChHHHHHHHHhhcCCCcccccc
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI   51 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~   51 (159)
                      ||+|+.||+.|....++..|++.+++++++.+..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999988865

>PHA00732 hypothetical protein

Probab=98.49  E-value=1.2e-07  Score=52.88  Aligned_cols=47  Identities=26%  Similarity=0.462  Sum_probs=37.9

Q ss_pred             CccCcccccccCChHHHHHHHHH-ccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRT-HTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      ||.|..|++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|. +++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~-~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHF-YSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhh-cccC
Confidence            57899999999999999999885 54   468999999997   577787 4443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.45  E-value=1.8e-07  Score=40.85  Aligned_cols=25  Identities=56%  Similarity=1.210  Sum_probs=20.4

Q ss_pred             HHHHHHHhhcCCCcccccccccccc
Q psy9695          33 ALQIHMRTHTGDKPFRCTICQKAFT   57 (159)
Q Consensus        33 ~~~~h~~~~~~~~~~~c~~c~~~~~   57 (159)
                      +|..|+++|++++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4678888888888888888888875

...

>PHA00732 hypothetical protein

Probab=98.32  E-value=7.5e-08  Score=53.75  Aligned_cols=39  Identities=26%  Similarity=0.254  Sum_probs=33.3

Q ss_pred             CccCCcccccccccCCceeeehh-hccCCCCCcccccccchhhchhhhhc
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIE-INIGSQLPKKAQQHIGAVEGKSFQAK  153 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~-~h~~~~~~~~~~~~~C~~C~~~f~~~  153 (159)
                      ||.|+.|++.|...+.|..|+ + .|.+         +.|+.|+++|...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~-r~~H~~---------~~C~~CgKsF~~l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHA-RRNHTL---------TKCPVCNKSYRRL   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHh-hcccCC---------CccCCCCCEeCCh
Confidence            689999999999999999999 5 4542         4799999999853

>KOG3993|consensus

Probab=98.30  E-value=5.2e-08  Score=69.16  Aligned_cols=81  Identities=22%  Similarity=0.395  Sum_probs=55.6

Q ss_pred             cccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccC------------------------
Q psy9695          47 FRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTG------------------------  102 (159)
Q Consensus        47 ~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~------------------------  102 (159)
                      |.|.+|...|-..-.|..|.-..   ...--|.|++|+++|.-+.+|-+|.++|.-                        
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~R---IV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPR---IVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCe---eEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            77777777665554444322111   111248888888888888888888887751                        


Q ss_pred             ---------CCCccCCcccccccccCCceeeehhhccC
Q psy9695         103 ---------DKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       103 ---------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                               +..|.|..|+|.|.+..-|++|+ .+|..
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHq-lthq~  381 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQ-LTHQR  381 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhH-Hhhhc
Confidence                     12388999999999999999998 55553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.13  E-value=1.2e-06  Score=60.37  Aligned_cols=55  Identities=18%  Similarity=0.416  Sum_probs=44.7

Q ss_pred             CCCccCCc--ccccccccCCceeeehhhccCCC------------CCcccccccchhhchhhhhccccc
Q psy9695         103 DKPFRCTI--CQKAFTTKGNLKVREIEINIGSQ------------LPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus       103 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~------------~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      ++||+|++  |+|+|.....|.-|++-=|....            ...+.+||.|.+|+|+++...+|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccce
Confidence            59999987  99999999999999966663322            224558999999999999988875

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.08  E-value=2.8e-06  Score=44.07  Aligned_cols=49  Identities=31%  Similarity=0.448  Sum_probs=35.1

Q ss_pred             CccCcccccccCChHHHHHHHHH-ccCC-CCccCCcccccccccCCceeeehhh
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRT-HTGD-KPFRCTICQKAFTTKGNLKVREIEI  128 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~  128 (159)
                      .|.|+.|++. .+...|..|... |..+ +.+.||+|...+.  .+|..|+...
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            3789999994 556788888765 4443 4688999998655  4888888433

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.87  E-value=8.8e-06  Score=34.32  Aligned_cols=22  Identities=50%  Similarity=0.828  Sum_probs=12.5

Q ss_pred             ccCcccccccCChHHHHHHHHH
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455556556555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.82  E-value=1.3e-05  Score=55.41  Aligned_cols=53  Identities=30%  Similarity=0.652  Sum_probs=43.3

Q ss_pred             CCCccCcc--cccccCChHHHHHHHHHcc-------------------CCCCccCCcccccccccCCceeeehh
Q psy9695          75 MPKHLCHV--CHKNFSSSSALQIHMRTHT-------------------GDKPFRCTICQKAFTTKGNLKVREIE  127 (159)
Q Consensus        75 ~~~~~C~~--C~~~~~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  127 (159)
                      .+||+|+.  |++.+.....|.-|+...+                   .++||+|++|+|.|.....|.-|..-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            47899987  8888888888888876322                   25899999999999999999988743

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.80  E-value=1.5e-05  Score=33.53  Aligned_cols=23  Identities=52%  Similarity=0.879  Sum_probs=20.4

Q ss_pred             ccCcccccccCChHHHHHHHHhh
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRTH   41 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~~   41 (159)
                      |+|+.|++.|.+...|..|+..|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.75  E-value=5.9e-06  Score=42.84  Aligned_cols=41  Identities=12%  Similarity=0.254  Sum_probs=32.3

Q ss_pred             CccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhh
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQ  151 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~  151 (159)
                      .|.||+|++. .....|..|....|..+.     +.+.||+|...+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~-----~~v~CPiC~~~~~   42 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSES-----KNVVCPICSSRVT   42 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCC-----CCccCCCchhhhh
Confidence            4899999995 455778889977777652     5799999998655

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.68  E-value=3.1e-06  Score=37.25  Aligned_cols=22  Identities=50%  Similarity=0.733  Sum_probs=10.9

Q ss_pred             ccCcccccccCChHHHHHHHHH
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRS   23 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCT
T ss_pred             CCCCccCCccCChhHHHHHhHH
Confidence            4455555555555555555443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.63  E-value=9.5e-05  Score=36.96  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=26.0

Q ss_pred             cCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCc
Q psy9695           5 LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKP   46 (159)
Q Consensus         5 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~   46 (159)
                      +..+.......+.|.+|++|+..++...+|..|+.+.++.+|
T Consensus        11 ~~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   11 STKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             -----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            344455556678889999999999999999999988776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.50  E-value=9.2e-05  Score=31.20  Aligned_cols=23  Identities=52%  Similarity=0.933  Sum_probs=18.8

Q ss_pred             ccCcccccccCChHHHHHHHHhh
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRTH   41 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~~   41 (159)
                      |.|+.|+..|.+...+..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            67999999999999999999765

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.49  E-value=6.1e-05  Score=33.00  Aligned_cols=26  Identities=27%  Similarity=0.664  Sum_probs=22.2

Q ss_pred             CccCCcccccccccCCceeeehhhccC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ||.|..|++.|.....|..|+ +.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~-~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK-RSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH-CTTTT
T ss_pred             CCCCCccCCccCChhHHHHHh-HHhcC
Confidence            588999999999999999999 76653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.47  E-value=0.0001  Score=31.08  Aligned_cols=23  Identities=52%  Similarity=0.933  Sum_probs=11.6

Q ss_pred             ccCcccccccCChHHHHHHHHHc
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      |.|+.|+..|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555543

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.41  E-value=2.3e-05  Score=45.81  Aligned_cols=76  Identities=18%  Similarity=0.355  Sum_probs=22.1

Q ss_pred             ccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehh
Q psy9695          48 RCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIE  127 (159)
Q Consensus        48 ~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  127 (159)
                      .|..|+..|.+...+..|+...+   +   +.-+... .+.....+..+...-. ...+.|.+|++.|.....|..|+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H---~---~~~~~~~-~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKH---G---FDIPDQK-YLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             --------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Ccccccccccccccccccccccc---c---ccccccc-cccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcC
Confidence            48889999888888876543211   1   1111111 1112233333333221 2369999999999999999999944


Q ss_pred             hccC
Q psy9695         128 INIG  131 (159)
Q Consensus       128 ~h~~  131 (159)
                      .++.
T Consensus        73 ~~H~   76 (100)
T PF12756_consen   73 KHHK   76 (100)
T ss_dssp             TTTT
T ss_pred             ccCC
Confidence            4443

>PRK04860 hypothetical protein; Provisional

Probab=97.34  E-value=0.00014  Score=46.22  Aligned_cols=39  Identities=26%  Similarity=0.636  Sum_probs=27.1

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKG  119 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  119 (159)
                      +|.|. |+.   ....+..|.+++.++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            57776 776   4455677777777777777777777766543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.12  E-value=0.00041  Score=40.44  Aligned_cols=74  Identities=31%  Similarity=0.405  Sum_probs=22.1

Q ss_pred             cCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHH
Q psy9695          20 LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        20 ~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      +|..|+..|.+...+..|+...++...-   . .........+..   ..... -...+.|..|++.|.+...|..|++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~---~-~~~l~~~~~~~~---~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP---D-QKYLVDPNRLLN---YLRKK-VKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             --------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc---c-cccccccccccc---ccccc-cCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            5899999999999999999654432111   1 011111111111   11111 11259999999999999999999997


Q ss_pred             cc
Q psy9695         100 HT  101 (159)
Q Consensus       100 h~  101 (159)
                      +.
T Consensus        73 ~~   74 (100)
T PF12756_consen   73 KH   74 (100)
T ss_dssp             TT
T ss_pred             cc
Confidence            53

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.97  E-value=0.001  Score=33.32  Aligned_cols=34  Identities=21%  Similarity=0.355  Sum_probs=20.7

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKP  105 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~  105 (159)
                      .....|-.|+.|+..+....+|..|+...++.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3455677888888888888888888877666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.94  E-value=0.0011  Score=28.17  Aligned_cols=22  Identities=59%  Similarity=0.874  Sum_probs=12.6

Q ss_pred             cCcccccccCChHHHHHHHHHc
Q psy9695          79 LCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555666666655666665543

>PRK04860 hypothetical protein; Provisional

Probab=96.92  E-value=0.00016  Score=46.04  Aligned_cols=40  Identities=20%  Similarity=0.401  Sum_probs=35.3

Q ss_pred             CccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccc
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHK  155 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~  155 (159)
                      +|.|. |+.   ....++.|. ++|.++      ++|.|..|+..|.....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~-ri~~g~------~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHN-RVVRGE------AVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHH-HHhcCC------ccEECCCCCceeEEecc
Confidence            69998 997   788889999 999999      89999999999986654

>smart00355 ZnF_C2H2 zinc finger

Probab=96.90  E-value=0.0011  Score=28.14  Aligned_cols=24  Identities=54%  Similarity=0.721  Sum_probs=20.7

Q ss_pred             ccCcccccccCChHHHHHHHHhhc
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      |.|+.|++.|.....+..|+..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999988654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.50  E-value=0.00047  Score=30.14  Aligned_cols=20  Identities=35%  Similarity=0.765  Sum_probs=16.1

Q ss_pred             ccCCcccccccccCCceeee
Q psy9695         106 FRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       106 ~~C~~C~~~f~~~~~l~~H~  125 (159)
                      |.|..|++.|.....|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            67888888888888888887

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.20  E-value=0.0032  Score=26.77  Aligned_cols=22  Identities=41%  Similarity=0.967  Sum_probs=18.6

Q ss_pred             ccCcccccccCChHHHHHHHHh
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRT   40 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~   40 (159)
                      |.|..|+..|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5688999999999999988864

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.16  E-value=0.0047  Score=26.01  Aligned_cols=23  Identities=30%  Similarity=0.527  Sum_probs=17.3

Q ss_pred             ccCcccccccCChHHHHHHHHhhc
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      |+|+.|+.... ...|..|+..++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999998887 888999987754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.93  E-value=0.0063  Score=25.58  Aligned_cols=22  Identities=32%  Similarity=0.555  Sum_probs=11.6

Q ss_pred             ccCcccccccCChHHHHHHHHHc
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      |.|+.|+.... ...|..|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            45666665555 55666666554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.86  E-value=0.0043  Score=26.36  Aligned_cols=20  Identities=45%  Similarity=1.041  Sum_probs=9.7

Q ss_pred             cCcccccccCChHHHHHHHH
Q psy9695          79 LCHVCHKNFSSSSALQIHMR   98 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~   98 (159)
                      .|..|+..|.+...+..|.+
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34455555555555544443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=95.60  E-value=0.008  Score=30.65  Aligned_cols=37  Identities=19%  Similarity=0.180  Sum_probs=30.7

Q ss_pred             cCCccccccCCCCcccCcccccccCChHHHHHHHHhh
Q psy9695           5 LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH   41 (159)
Q Consensus         5 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~   41 (159)
                      +.+..+.+-+||.-+.|+-|+..|+.......|+...
T Consensus         4 ~KA~Kv~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049           4 LKAIKVRDRDGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             ceeeEeeccCCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            3445567778999999999999999999999998653

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=95.48  E-value=0.0081  Score=27.56  Aligned_cols=10  Identities=30%  Similarity=1.119  Sum_probs=5.8

Q ss_pred             CCccCCcccc
Q psy9695         104 KPFRCTICQK  113 (159)
Q Consensus       104 ~~~~C~~C~~  113 (159)
                      .++.|++||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4566666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146|consensus

Probab=95.15  E-value=0.029  Score=46.49  Aligned_cols=128  Identities=16%  Similarity=0.285  Sum_probs=76.7

Q ss_pred             CCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHH
Q psy9695          15 GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQ   94 (159)
Q Consensus        15 ~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~   94 (159)
                      -.+-++|+.|+..++....|..|++..+.+...  ..|- .+.....+.+   -..-..+..+|.|..|...+.....|.
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~-~gq~~~~~ar---g~~~~~~~~p~~C~~C~~stttng~Ls  535 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCK-AGQNHPRLAR---GEVYRCPGKPYPCRACNYSTTTNGNLS  535 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccch--hHhH-hccccccccc---cccccCCCCcccceeeeeeeecchHHH
Confidence            346689999999999999999998763322111  1111 0101100100   001122345677888887777777777


Q ss_pred             HHHHHcc------------------------------------------C-CCCccCCcccccccccCCceeeehhhccC
Q psy9695          95 IHMRTHT------------------------------------------G-DKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        95 ~H~~~h~------------------------------------------~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      .|+....                                          . .-+|.|.+|+..-.-..+|+.|+...++.
T Consensus       536 ihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s  615 (1406)
T KOG1146|consen  536 IHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSS  615 (1406)
T ss_pred             HHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCC
Confidence            7766211                                          0 12489999999888889999999666665


Q ss_pred             CCCCcccccccchhhchhhhhcc
Q psy9695         132 SQLPKKAQQHIGAVEGKSFQAKH  154 (159)
Q Consensus       132 ~~~~~~~~~~~C~~C~~~f~~~~  154 (159)
                      .      .+--+..+...+...+
T Consensus       616 ~------~p~~~Lq~~it~~l~~  632 (1406)
T KOG1146|consen  616 S------PPSLVLQQNITSSLAS  632 (1406)
T ss_pred             C------ChHHHhhhcchhhccc
Confidence            5      4455555555554433

>KOG2231|consensus

Probab=95.12  E-value=0.012  Score=45.62  Aligned_cols=45  Identities=24%  Similarity=0.530  Sum_probs=34.4

Q ss_pred             ccCcccccccCChHHHHHHHHHccCCCCccCCcc------cccccccCCceeeeh
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC------QKAFTTKGNLKVREI  126 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~  126 (159)
                      -.|..|..-|.....|..|++.++    |.|..|      +.-|.....|..|..
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR  233 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFR  233 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhh
Confidence            568889999988889999988654    556555      456677788888883

>PHA00626 hypothetical protein

Probab=94.66  E-value=0.012  Score=30.05  Aligned_cols=15  Identities=13%  Similarity=0.352  Sum_probs=8.8

Q ss_pred             CCccCCccccccccc
Q psy9695         104 KPFRCTICQKAFTTK  118 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~  118 (159)
                      ..|.|+.||..|+-.
T Consensus        22 nrYkCkdCGY~ft~~   36 (59)
T PHA00626         22 DDYVCCDCGYNDSKD   36 (59)
T ss_pred             cceEcCCCCCeechh
Confidence            446666666666543

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.33  E-value=0.044  Score=32.67  Aligned_cols=45  Identities=18%  Similarity=0.535  Sum_probs=29.6

Q ss_pred             cCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeee
Q psy9695          79 LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      .|-.|...|.......  ...-.....|+|+.|...|-..-+.-.|.
T Consensus        57 ~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe  101 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHE  101 (112)
T ss_pred             cccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhhh
Confidence            4788888776543111  00012244689999999999888888888

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.33  E-value=0.052  Score=23.14  Aligned_cols=20  Identities=25%  Similarity=0.688  Sum_probs=14.2

Q ss_pred             ccCcccccccCChHHHHHHHH
Q psy9695          19 HLCHVCHKNFSSSSALQIHMR   39 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~   39 (159)
                      ..|+.|++.| ....+..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688888888 5666777754

>KOG2893|consensus

Probab=93.90  E-value=0.043  Score=36.98  Aligned_cols=48  Identities=25%  Similarity=0.652  Sum_probs=40.1

Q ss_pred             cCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          79 LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      .|=+|++.|.....|+.|+++    +-|+|.+|.|..-+...|..|--++|.
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhh
Confidence            477899999999999988874    458999999999888899888756653

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=93.37  E-value=0.033  Score=37.49  Aligned_cols=50  Identities=20%  Similarity=0.175  Sum_probs=23.9

Q ss_pred             CCccCCcccccccccCCceeeehhhcc--------CCCCCcccccccchhhchhhhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINI--------GSQLPKKAQQHIGAVEGKSFQAK  153 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~--------~~~~~~~~~~~~C~~C~~~f~~~  153 (159)
                      +...||+|++.|....-.....+....        ++..|.-=....||.||.+|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            445677777776655444433311111        11111111355677777776544

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.36  E-value=0.011  Score=30.19  Aligned_cols=29  Identities=17%  Similarity=0.359  Sum_probs=19.6

Q ss_pred             CCCCccCCcccccccccCCceeeehhhcc
Q psy9695         102 GDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       102 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      ||..++||-||..|...-+...|..+.|.
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            45556777777777777777777755553

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.67  E-value=0.11  Score=23.82  Aligned_cols=22  Identities=18%  Similarity=0.711  Sum_probs=18.5

Q ss_pred             cccCcccccccCChHHHHHHHH
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMR   39 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~   39 (159)
                      +|.|..|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5789999999998888888874

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=92.58  E-value=0.1  Score=35.17  Aligned_cols=10  Identities=20%  Similarity=0.494  Sum_probs=6.6

Q ss_pred             ccCccccccc
Q psy9695          78 HLCHVCHKNF   87 (159)
Q Consensus        78 ~~C~~C~~~~   87 (159)
                      ++|+.||.++
T Consensus        49 ~vCP~CgyA~   58 (214)
T PF09986_consen   49 WVCPHCGYAA   58 (214)
T ss_pred             EECCCCCCcc
Confidence            5677777654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.44  E-value=0.062  Score=39.51  Aligned_cols=56  Identities=34%  Similarity=0.627  Sum_probs=49.4

Q ss_pred             CCccCcccccccCChHHHHHHHH--HccCC--CCccCC--cccccccccCCceeeehhhccCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMR--THTGD--KPFRCT--ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      .++.|..|...|.....+..|..  .|.++  +++.|+  .|++.|.+...+..|. ..|.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI-LLHTSI  349 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCc-ccccCC
Confidence            35888999999999999999999  79999  899999  7999999999999999 888766

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=92.02  E-value=0.088  Score=24.29  Aligned_cols=10  Identities=30%  Similarity=0.664  Sum_probs=5.3

Q ss_pred             ccCccccccc
Q psy9695          78 HLCHVCHKNF   87 (159)
Q Consensus        78 ~~C~~C~~~~   87 (159)
                      |.|..||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            4555555543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2186|consensus

Probab=91.99  E-value=0.069  Score=36.32  Aligned_cols=45  Identities=24%  Similarity=0.505  Sum_probs=32.0

Q ss_pred             ccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeee
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      |.|..||....-+ .+..|+...++ .-|.|..|++.|.. .+...|.
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhh
Confidence            6788888776555 35567777766 55788888888877 6666666

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=91.96  E-value=0.055  Score=26.29  Aligned_cols=12  Identities=25%  Similarity=0.650  Sum_probs=6.5

Q ss_pred             ccCcccccccCC
Q psy9695          78 HLCHVCHKNFSS   89 (159)
Q Consensus        78 ~~C~~C~~~~~~   89 (159)
                      |.|..||..|..
T Consensus         6 y~C~~Cg~~fe~   17 (42)
T PF09723_consen    6 YRCEECGHEFEV   17 (42)
T ss_pred             EEeCCCCCEEEE
Confidence            555555555543

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=91.84  E-value=0.054  Score=28.19  Aligned_cols=32  Identities=25%  Similarity=0.580  Sum_probs=16.4

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCcccc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQK  113 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  113 (159)
                      .|.|+.||+.....-.   .-+  ....+|.|+.||.
T Consensus        25 ~F~CPnCG~~~I~RC~---~CR--k~~~~Y~CP~CGF   56 (59)
T PRK14890         25 KFLCPNCGEVIIYRCE---KCR--KQSNPYTCPKCGF   56 (59)
T ss_pred             EeeCCCCCCeeEeech---hHH--hcCCceECCCCCC
Confidence            4777777765322211   011  1235677777774

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.36  E-value=0.14  Score=37.57  Aligned_cols=121  Identities=27%  Similarity=0.492  Sum_probs=70.4

Q ss_pred             CcccCcccccccCChHHHHHHHH--hhcCC--Cccccc--cccccccCccccccccccccccCCCCCccCcc--------
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMR--THTGD--KPFRCT--ICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--------   82 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~--~~~~~--~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--------   82 (159)
                      .++.|..|...|.....+..|..  .|.++  +++.|+  .|+..|.....+..   +...+.+..++.+..        
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  364 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKR---HILLHTSISPAKEKLLNSSSKFS  364 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccC---CcccccCCCccccccccCccccc
Confidence            45777778888877777777777  67777  777777  67777777776655   223333333322222        


Q ss_pred             -----------------------------cccccCChHHHHHHHHHccCCC--CccCCcccccccccCCceeeehhhccC
Q psy9695          83 -----------------------------CHKNFSSSSALQIHMRTHTGDK--PFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        83 -----------------------------C~~~~~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                                                   |...+.....+..|...+....  .+.+..|.+.|.....+..|+ +.|..
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  443 (467)
T COG5048         365 PLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHK-KIHTN  443 (467)
T ss_pred             cccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccc-ccccc
Confidence                                         1112222222222222222222  355677888888888888888 77766


Q ss_pred             CCCCcccccccchhhc
Q psy9695         132 SQLPKKAQQHIGAVEG  147 (159)
Q Consensus       132 ~~~~~~~~~~~C~~C~  147 (159)
                      .      .++.|..++
T Consensus       444 ~------~~~~~~~~~  453 (467)
T COG5048         444 H------APLLCSILK  453 (467)
T ss_pred             C------Cceeecccc
Confidence            5      455554443

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=90.94  E-value=0.093  Score=25.09  Aligned_cols=11  Identities=27%  Similarity=0.697  Sum_probs=5.9

Q ss_pred             ccCcccccccC
Q psy9695          78 HLCHVCHKNFS   88 (159)
Q Consensus        78 ~~C~~C~~~~~   88 (159)
                      |.|+.||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            45555555553

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>KOG2893|consensus

Probab=90.92  E-value=0.054  Score=36.55  Aligned_cols=42  Identities=19%  Similarity=0.333  Sum_probs=32.5

Q ss_pred             CCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhcccc
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKT  156 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  156 (159)
                      +++| |.+|++.|-..-.|..|++.           +-|+|-+|.+++-+--.|
T Consensus         9 ~kpw-cwycnrefddekiliqhqka-----------khfkchichkkl~sgpgl   50 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQKA-----------KHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhhh-----------ccceeeeehhhhccCCCc
Confidence            4554 89999999999999888822           458999999987665443

>KOG2482|consensus

Probab=90.15  E-value=0.33  Score=34.67  Aligned_cols=109  Identities=23%  Similarity=0.376  Sum_probs=65.6

Q ss_pred             cccCcccccccCChHHHHHHHHh--hcCCCc--------cc--cccccccccCccc-cccccc-ccc-c--------cCC
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRT--HTGDKP--------FR--CTICQKAFTTKGN-LKLIPN-AVF-N--------VAG   74 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~--~~~~~~--------~~--c~~c~~~~~~~~~-l~~~~~-~~~-~--------~~~   74 (159)
                      .+.|-.|.+.|+.+..|..||+.  |....|        |.  ...-|++.+.... ..+... ... .        ..+
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            47899999999999999999975  322222        11  1112222111100 000000 000 0        001


Q ss_pred             CCC--ccCcccccccCChHHHHHHHHHccC-C--------------------------CCccCCcccccccccCCceeee
Q psy9695          75 MPK--HLCHVCHKNFSSSSALQIHMRTHTG-D--------------------------KPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus        75 ~~~--~~C~~C~~~~~~~~~l~~H~~~h~~-~--------------------------~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      ..+  .+|..|.....++..|..|++.-+. +                          ..-.|-.|.-.|.....|..||
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            112  5899999999999999999986432 0                          1235888999999999999999


Q ss_pred             h
Q psy9695         126 I  126 (159)
Q Consensus       126 ~  126 (159)
                      .
T Consensus       355 ~  355 (423)
T KOG2482|consen  355 V  355 (423)
T ss_pred             c
Confidence            3

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=90.09  E-value=0.23  Score=23.31  Aligned_cols=32  Identities=25%  Similarity=0.715  Sum_probs=14.6

Q ss_pred             cCcccccccCChHHHHHHHHHccCCCCccCCcccccc
Q psy9695          79 LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAF  115 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (159)
                      .|+.|+..|.-..+     ++..+.+..+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHH-----HcccCCcEEECCCCCcEe
Confidence            45555555544332     111223345566665544

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=90.09  E-value=0.2  Score=23.57  Aligned_cols=13  Identities=23%  Similarity=0.572  Sum_probs=6.7

Q ss_pred             ccCcccccccCCh
Q psy9695          78 HLCHVCHKNFSSS   90 (159)
Q Consensus        78 ~~C~~C~~~~~~~   90 (159)
                      +.|+.|+..|.-.
T Consensus         3 ~~CP~C~~~~~v~   15 (38)
T TIGR02098         3 IQCPNCKTSFRVV   15 (38)
T ss_pred             EECCCCCCEEEeC
Confidence            3455666555443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.63  E-value=1.3  Score=26.60  Aligned_cols=86  Identities=20%  Similarity=0.298  Sum_probs=51.4

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCCCc------------cccccccccccCccccccccccccccCCCCCccCccc
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGDKP------------FRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC   83 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~------------~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C   83 (159)
                      +-|..|+.|+-+.-....|.+.....-..++            ..|--|+..|........     ........|.|+.|
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~-----~~~~~~~~y~C~~C   87 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF-----DELKDSHRYVCAVC   87 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccccc-----cccccccceeCCCC
Confidence            4577899999887776666653221111111            236667777755432110     00123446999999


Q ss_pred             ccccCChHHHHHHHHHccCCCCccCCccc
Q psy9695          84 HKNFSSSSALQIHMRTHTGDKPFRCTICQ  112 (159)
Q Consensus        84 ~~~~~~~~~l~~H~~~h~~~~~~~C~~C~  112 (159)
                      ...|--.=+...|...|      .|+-|.
T Consensus        88 ~~~FC~dCD~fiHe~Lh------~CPGC~  110 (112)
T TIGR00622        88 KNVFCVDCDVFVHESLH------CCPGCI  110 (112)
T ss_pred             CCccccccchhhhhhcc------CCcCCC
Confidence            99997776777777666      466664

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=89.52  E-value=0.12  Score=25.63  Aligned_cols=30  Identities=17%  Similarity=0.421  Sum_probs=17.1

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCccccccc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFT  116 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  116 (159)
                      .|.|+.||..+.....          .....|+.||..+.
T Consensus         3 ~y~C~~CG~~~~~~~~----------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDEY----------GTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECCC----------CCceECCCCCCeEE
Confidence            4677777766543211          11567888875443

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=88.92  E-value=0.13  Score=26.82  Aligned_cols=32  Identities=25%  Similarity=0.483  Sum_probs=18.3

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCcccc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQK  113 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  113 (159)
                      .|.|+.||+.....-.     +--....+|+|+.||.
T Consensus        27 ~F~CPnCGe~~I~Rc~-----~CRk~g~~Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRCA-----KCRKLGNPYRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehhh-----hHHHcCCceECCCcCc
Confidence            4778888865444321     1111245788888874

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=88.86  E-value=0.32  Score=22.71  Aligned_cols=32  Identities=19%  Similarity=0.582  Sum_probs=14.6

Q ss_pred             cCcccccccCChHHHHHHHHHccCCCCccCCcccccc
Q psy9695          79 LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAF  115 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (159)
                      .|+.|+..|.-....     +-...+..+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            455555555444331     11222334566665544

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=88.79  E-value=0.17  Score=25.71  Aligned_cols=29  Identities=21%  Similarity=0.484  Sum_probs=17.0

Q ss_pred             ccCcccccccCChHHHHHHHHHccCCCCccCCcccc
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQK  113 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  113 (159)
                      |.|..|+..|.....+      .. +.+-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKM------SD-DPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEec------CC-CCCCCCCCCCC
Confidence            6788888777543221      11 34456888875

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=88.64  E-value=0.22  Score=31.98  Aligned_cols=24  Identities=17%  Similarity=0.508  Sum_probs=17.9

Q ss_pred             CccCCcccccccccCCceeeehhhccCCCCCcccccccchhhch
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGK  148 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~  148 (159)
                      .|.|++||..              +.++      .|-+||+||.
T Consensus       134 ~~vC~vCGy~--------------~~ge------~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT--------------HEGE------APEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc--------------ccCC------CCCcCCCCCC
Confidence            5999999843              3345      7889999984

>KOG1146|consensus

Probab=88.15  E-value=0.18  Score=42.17  Aligned_cols=53  Identities=30%  Similarity=0.611  Sum_probs=39.6

Q ss_pred             CCccCcccccccCChHHHHHHHHH-cc------------------------CCCCccCCcccccccccCCceeeehhh
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRT-HT------------------------GDKPFRCTICQKAFTTKGNLKVREIEI  128 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~-h~------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~  128 (159)
                      +.+.|+.|+..|.....|..|++. |.                        +-++|.|..|..+++...+|..|+...
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHHH
Confidence            567788888888888888888776 11                        126788888999988888888888443

>smart00440 ZnF_C2C2 C2C2 Zinc finger

Probab=87.73  E-value=0.13  Score=24.70  Aligned_cols=12  Identities=8%  Similarity=0.039  Sum_probs=7.7

Q ss_pred             ccccchhhchhh
Q psy9695         139 QQHIGAVEGKSF  150 (159)
Q Consensus       139 ~~~~C~~C~~~f  150 (159)
                      ..|.|..|+..+
T Consensus        27 ~fy~C~~C~~~w   38 (40)
T smart00440       27 VFYVCTKCGHRW   38 (40)
T ss_pred             EEEEeCCCCCEe
Confidence            566776666554

Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.58  E-value=1  Score=26.79  Aligned_cols=26  Identities=19%  Similarity=0.475  Sum_probs=19.2

Q ss_pred             CCCcccCcccccccCChHHHHHHHHhh
Q psy9695          15 GMPKHLCHVCHKNFSSSSALQIHMRTH   41 (159)
Q Consensus        15 ~~~~~~C~~C~~~f~~~~~~~~h~~~~   41 (159)
                      .-+-..|..|+.+..- .++..|++..
T Consensus         8 ~~~vlIC~~C~~av~~-~~v~~HL~~~   33 (109)
T PF12013_consen    8 EYRVLICRQCQYAVQP-SEVESHLRKR   33 (109)
T ss_pred             cCCEEEeCCCCcccCc-hHHHHHHHHh
Confidence            3445789999987655 7888898743

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF01096 TFIIS_C: Transcription factor S-II (TFIIS); InterPro: IPR001222 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=87.12  E-value=0.069  Score=25.49  Aligned_cols=12  Identities=8%  Similarity=0.019  Sum_probs=8.4

Q ss_pred             ccccchhhchhh
Q psy9695         139 QQHIGAVEGKSF  150 (159)
Q Consensus       139 ~~~~C~~C~~~f  150 (159)
                      ..|.|..|+..|
T Consensus        27 ~fy~C~~C~~~w   38 (39)
T PF01096_consen   27 LFYVCCNCGHRW   38 (39)
T ss_dssp             EEEEESSSTEEE
T ss_pred             EEEEeCCCCCee
Confidence            577777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a zinc finger motif found in transcription factor IIs (TFIIS). In eukaryotes the initiation of transcription of protein encoding genes by polymerase II (Pol II) is modulated by general and specific transcription factors. The general transcription factors operate through common promoters elements (such as the TATA box). At least eight different proteins associate to form the general transcription factors: TFIIA, -IIB, -IID, -IIE, -IIF, -IIG, -IIH and -IIS []. During mRNA elongation, Pol II can encounter DNA sequences that cause reverse movement of the enzyme. Such backtracking involves extrusion of the RNA 3'-end into the pore, and can lead to transcriptional arrest. Escape from arrest requires cleavage of the extruded RNA with the help of TFIIS, which induces mRNA cleavage by enhancing the intrinsic nuclease activity of RNA polymerase (Pol) II, past template-encoded pause sites []. TFIIS extends from the polymerase surface via a pore to the internal active site. Two essential and invariant acidic residues in a TFIIS loop complement the Pol II active site and could position a metal ion and a water molecule for hydrolytic RNA cleavage. TFIIS also induces extensive structural changes in Pol II that would realign nucleic acids in the active centre. TFIIS is a protein of about 300 amino acids. It contains three regions: a variable N-terminal domain not required for TFIIS activity; a conserved central domain required for Pol II binding; and a conserved C-terminal C4-type zinc finger essential for RNA cleavage. The zinc finger folds in a conformation termed a zinc ribbon [] characterised by a three-stranded antiparallel beta-sheet and two beta-hairpins. A backbone model for Pol II-TFIIS complex was obtained from X-ray analysis. It shows that a beta hairpin protrudes from the zinc finger and complements the pol II active site []. Some viral proteins also contain the TFIIS zinc ribbon C-terminal domain. The Vaccinia virus protein, unlike its eukaryotic homologue, is an integral RNA polymerase subunit rather than a readily separable transcription factor []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding, 0006351 transcription, DNA-dependent; PDB: 3M4O_I 3S14_I 2E2J_I 4A3J_I 3HOZ_I 1TWA_I 3S1Q_I 3S1N_I 1TWG_I 3I4M_I ....

>PF14446 Prok-RING_1: Prokaryotic RING finger family 1

Probab=87.06  E-value=0.19  Score=25.75  Aligned_cols=19  Identities=26%  Similarity=0.391  Sum_probs=11.4

Q ss_pred             ccchhhchhhhhcccccCC
Q psy9695         141 HIGAVEGKSFQAKHKTETC  159 (159)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~~  159 (159)
                      .+|+.||+.|...+.++.|
T Consensus         6 ~~C~~Cg~~~~~~dDiVvC   24 (54)
T PF14446_consen    6 CKCPVCGKKFKDGDDIVVC   24 (54)
T ss_pred             ccChhhCCcccCCCCEEEC
Confidence            4566666666666655544

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.20  E-value=0.5  Score=28.15  Aligned_cols=11  Identities=27%  Similarity=0.782  Sum_probs=5.6

Q ss_pred             CccCccccccc
Q psy9695          77 KHLCHVCHKNF   87 (159)
Q Consensus        77 ~~~C~~C~~~~   87 (159)
                      |.+|+.||..|
T Consensus        26 PivCP~CG~~~   36 (108)
T PF09538_consen   26 PIVCPKCGTEF   36 (108)
T ss_pred             CccCCCCCCcc
Confidence            44555555544

The function of members of this family is unknown.

>KOG4173|consensus

Probab=86.19  E-value=0.098  Score=34.51  Aligned_cols=80  Identities=20%  Similarity=0.492  Sum_probs=52.6

Q ss_pred             Ccccccc--ccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHcc----------CCCCccCC--c
Q psy9695          45 KPFRCTI--CQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHT----------GDKPFRCT--I  110 (159)
Q Consensus        45 ~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~----------~~~~~~C~--~  110 (159)
                      ..+.|++  |...+........|.      .....-.|..|.+.|.+..-|..|+...+          |.-.|.|-  .
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY------~~~h~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEg  151 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHY------HTLHGNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEG  151 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhh------hhcccchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHh
Confidence            3467776  555555544443221      11223579999999998888888877543          23358884  4


Q ss_pred             ccccccccCCceeeehhhcc
Q psy9695         111 CQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       111 C~~~f~~~~~l~~H~~~~h~  130 (159)
                      |+..|.....-..|+...|-
T Consensus       152 Ct~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  152 CTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhhhhHHHHhcc
Confidence            99999988888888866664

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=85.56  E-value=0.13  Score=32.64  Aligned_cols=16  Identities=38%  Similarity=0.619  Sum_probs=10.0

Q ss_pred             ccCCcccccccccCCc
Q psy9695         106 FRCTICQKAFTTKGNL  121 (159)
Q Consensus       106 ~~C~~C~~~f~~~~~l  121 (159)
                      |+|+.||+.|...-.+
T Consensus        29 ~~c~~c~~~f~~~e~~   44 (154)
T PRK00464         29 RECLACGKRFTTFERV   44 (154)
T ss_pred             eeccccCCcceEeEec
Confidence            6677777776655443

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=84.79  E-value=0.41  Score=30.63  Aligned_cols=19  Identities=21%  Similarity=0.258  Sum_probs=11.0

Q ss_pred             CCCccCCcccccccccCCc
Q psy9695         103 DKPFRCTICQKAFTTKGNL  121 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l  121 (159)
                      ..-|.|+.|+..|+...-+
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~  125 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAM  125 (158)
T ss_pred             CCeEECCCCCcEeeHHHHH
Confidence            3446677777666555444

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=84.69  E-value=0.76  Score=29.41  Aligned_cols=19  Identities=21%  Similarity=0.258  Sum_probs=10.1

Q ss_pred             CCccccccccccccCcccc
Q psy9695          44 DKPFRCTICQKAFTTKGNL   62 (159)
Q Consensus        44 ~~~~~c~~c~~~~~~~~~l   62 (159)
                      ..-|.|+.|+..|+....+
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~  125 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAM  125 (158)
T ss_pred             CCeEECCCCCcEeeHHHHH
Confidence            3446666666555544433

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG4173|consensus

Probab=84.56  E-value=0.23  Score=32.86  Aligned_cols=76  Identities=22%  Similarity=0.394  Sum_probs=53.2

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC-C--CCcccccccc--hhhch
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS-Q--LPKKAQQHIG--AVEGK  148 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~-~--~~~~~~~~~C--~~C~~  148 (159)
                      ..+.|+.  |.+.|.+......|-.+-++   -.|.+|.+.|.....|..|+.-.|..- +  ...+.-.|.|  ..|+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            3477876  66778777766666655433   389999999999999999986666420 0  1112367999  67999


Q ss_pred             hhhhcc
Q psy9695         149 SFQAKH  154 (159)
Q Consensus       149 ~f~~~~  154 (159)
                      +|++..
T Consensus       155 KFkT~r  160 (253)
T KOG4173|consen  155 KFKTSR  160 (253)
T ss_pred             hhhhhh
Confidence            998754

>PF00301 Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubredoxin is a low molecular weight iron-containing bacterial protein involved in electron transfer [, ], sometimes replacing ferredoxin as an electron carrier []

Probab=84.02  E-value=0.64  Score=23.19  Aligned_cols=8  Identities=25%  Similarity=0.356  Sum_probs=2.8

Q ss_pred             cccchhhc
Q psy9695         140 QHIGAVEG  147 (159)
Q Consensus       140 ~~~C~~C~  147 (159)
                      -|.|++|+
T Consensus        34 ~w~CP~C~   41 (47)
T PF00301_consen   34 DWVCPVCG   41 (47)
T ss_dssp             T-B-TTTS
T ss_pred             CCcCcCCC
Confidence            34455544

The 3-D structures of a number of rubredoxins have been solved [, ]. The fold belongs to the alpha+beta class, with 2 alpha-helices and 2-3 beta-strands. Its active site contains an iron ion which is co-ordinated by the sulphurs of four conserved cysteine residues forming an almost regular tetrahedron. The conserved cysteines reside on two loops, which are the most conserved regions of the protein. In addition, a ring of acidic residues in the proximity of the [Fe(Cys)4] centre is also well-conserved []. ; GO: 0009055 electron carrier activity, 0046872 metal ion binding; PDB: 2RDV_C 1RDV_A 1S24_A 1T9O_B 1B2J_A 1SMW_A 2PVE_B 1BFY_A 1T9P_C 1C09_C ....

>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center

Probab=83.65  E-value=1.1  Score=22.71  Aligned_cols=11  Identities=18%  Similarity=0.637  Sum_probs=5.3

Q ss_pred             ccCcccccccC
Q psy9695          78 HLCHVCHKNFS   88 (159)
Q Consensus        78 ~~C~~C~~~~~   88 (159)
                      |.|..||..+.
T Consensus         2 y~C~~CgyiYd   12 (50)
T cd00730           2 YECRICGYIYD   12 (50)
T ss_pred             cCCCCCCeEEC
Confidence            44555554443

Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=83.22  E-value=0.51  Score=30.84  Aligned_cols=33  Identities=18%  Similarity=0.272  Sum_probs=19.2

Q ss_pred             CCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhh
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQA  152 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~  152 (159)
                      .-|.|+.|+..|+...-+.                ..|.|+.||..+..
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~----------------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME----------------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh----------------cCCcCCCCCCCCee
Confidence            3467777776666554321                24677777765443

>PF14353 CpXC: CpXC protein

Probab=83.11  E-value=2.2  Score=26.17  Aligned_cols=22  Identities=23%  Similarity=0.460  Sum_probs=16.4

Q ss_pred             CCccCCcccccccccCCceeee
Q psy9695         104 KPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      ..|.|+.||..|.-...+.-|-
T Consensus        37 ~~~~CP~Cg~~~~~~~p~lY~D   58 (128)
T PF14353_consen   37 FSFTCPSCGHKFRLEYPLLYHD   58 (128)
T ss_pred             CEEECCCCCCceecCCCEEEEc
Confidence            3478888888888777776666

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=82.45  E-value=0.66  Score=23.31  Aligned_cols=10  Identities=20%  Similarity=0.607  Sum_probs=6.1

Q ss_pred             ccCccccccc
Q psy9695          78 HLCHVCHKNF   87 (159)
Q Consensus        78 ~~C~~C~~~~   87 (159)
                      |.|..|+..|
T Consensus         7 Y~C~~Cg~~~   16 (49)
T COG1996           7 YKCARCGREV   16 (49)
T ss_pred             EEhhhcCCee
Confidence            5666666555

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.03  E-value=1.3  Score=28.99  Aligned_cols=31  Identities=23%  Similarity=0.448  Sum_probs=17.1

Q ss_pred             CccccccccccccCccccccccccccccCCCCCccCccccccc
Q psy9695          45 KPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNF   87 (159)
Q Consensus        45 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~   87 (159)
                      .-|.|+.|+..|+....+.            ..|.|+.||..+
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~------------~~F~Cp~Cg~~L  146 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME------------YGFRCPQCGEML  146 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh------------cCCcCCCCCCCC
Confidence            4466666666665544331            146666666543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	159
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-17
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-12
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-07
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-10
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-10
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-10
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-10
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-09
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		8e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		6e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-08
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		9e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		4e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		4e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		8e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		9e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		9e-07
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-05
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		6e-05
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		6e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		6e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-05
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		6e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 15  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAG 74
           G   + C  C K+FS    L  H RTHTG+KP++C  C K+F+ + NL+          G
Sbjct: 46  GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR---THTG 102
Query: 75  MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
              + C  C K+FS  + L+ H RTHTG+KP++C  C K+F+ + NL
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL 149

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHL- 79
           C  CHK F S   L++H R HTG+KPF C  C K +  K N  L+ +   N     + + 
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKEN--LLEHEARNCMNRSEQVF 67
Query: 80  -CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIG 131
            C VC + F     L++HM +HTG+ P++C+ C + F  K +L+   I+++ G
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 31/101 (30%)
Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C K+FS SS LQ H RTHTG+KP++C  C K+                         
Sbjct: 7   CPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKS------------------------- 41
Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
                 FS SS LQ H RTHTG+KP++C  C K+F+   +L
Sbjct: 42  ------FSQSSDLQKHQRTHTGEKPYKCPECGKSFSRSDHL 76

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 80  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
           C  C K+FS SS LQ H RTHTG+KP++C  C K+F+   +L+
Sbjct: 7   CPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQ 49

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKLIPNAVFNVAGMPKHLCH 81
           C+K +   S LQ+H R HTG+KP++C    C++ F+    LK          G+    C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR---RHTGVKPFQCK 70
Query: 82  VCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNL 121
            C + FS S  L+ H RTHTG+KPF C    CQK F     L
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDEL 112

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS SS L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 43  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 86

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 31/94 (32%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS  + L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT 117
             NFS  ++L  H+RTHTG+KPF C IC + F T
Sbjct: 43  --NFSQQASLNAHIRTHTGEKPFACDICGRKFAT 74

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 83  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           C + FS  + L  H+R HTG KPF+C IC + F+ + +L
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASL 50

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S+ L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 43  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 86

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S +L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 43  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 86

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S+ L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 43  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 86

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S  L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 43  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 86

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S  L  H+R HTG KPF+C IC +                             
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMR----------------------------- 41
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 42  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 32/107 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S  L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI 130
             NFS S  L  H+RTHTG+KPF C IC + F  + + + R  +I++
Sbjct: 43  --NFSRSDHLTTHIRTHTGEKPFACDICGRKF-ARSDERKRHTKIHL 86

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 31/94 (32%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS  + L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMR----------------------------- 42
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT 117
             NFS  + L  H+RTHTG+KPF C IC + F T
Sbjct: 43  --NFSQHTGLNQHIRTHTGEKPFACDICGRKFAT 74

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C K+F  SS L  H+  H+  +P+ C  C K F  K ++K      F   G   H C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMK---KHTFIHTGEKPHKC 60
Query: 81  HVCHKNFSSSSALQIHMRTHTG 102
            VC K FS SS L  H R HTG
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 31/107 (28%)
Query: 19  HLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMP 76
           H C    C K ++ SS L+ H+RTHTG+KP++CT                          
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW------------------------- 50
Query: 77  KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                 C   F+ S  L  H R HTG KPF+C +C ++F+   +L +
Sbjct: 51  ----EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL 93

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 19  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKH 78
           H C VC K FS    L+ HMR HTG KP++C  C  A     +L    N    +    + 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSL----NKHLRIHSDERP 64
Query: 79  L-CHVCHKNFSSSSALQIHMRTHTGD 103
             C +C     +SS L +H+R+HTGD
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 78  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           H C VC K FS    L+ HMR HTG KP++C  C  A     +L
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSL 52

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 44/106 (41%), Gaps = 31/106 (29%)
Query: 19  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKH 78
           H+C  C K F  SS L+ H   HTG+KPF+CT                            
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF--------------------------- 67
Query: 79  LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLK 122
               C K FS    L+ H+R HTGD+P+ C    C K F    NLK
Sbjct: 68  --EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLK 111

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 78  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQ 133
           H+C  C K F  SS L+ H   HTG+KPF+CT   C K F+   NL+   + I+ G +
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT-HVRIHTGDR 91

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 28  FSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKLIPNAVFNVAGMPKHLCH--VC 83
           F +   L +HMR HTG+KP +CT   C+K+++   NLK     + +  G   ++C    C
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK---THLRSHTGEKPYMCEHEGC 105
Query: 84  HKNFSSSSALQIHM-RTHTGDKPFRCTI--CQKAFTTKGNLK 122
            K FS++S    H  RTH+ +KP+ C +  C K +T   +L+
Sbjct: 106 SKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 29/100 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C K ++ SS L+ H+RTHTG+KP+ C                     +  G        C
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHC---------------------DWDG--------C 43
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              F+ S  L  H R HTG +PF+C  C +AF+   +L +
Sbjct: 44  GWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL 83

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKLIPNAVFNVAGMPKHLCH 81
           C K F+S   L  H  THTG+K F C    C   FTTK N+K   N   N+  +  ++CH
Sbjct: 50  CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK-ICVYVCH 108
Query: 82  V--CHKNFSSSSALQIHMRTHTGDKPFRC--TICQKAFTTKGNLKVRE 125
              C K F   + L++H  +HT   P+ C    C K F+    LK  E
Sbjct: 109 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 29/100 (29%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C K ++ SS L+ H+RTHTG+KP+ C                     +  G        C
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHC---------------------DWDG--------C 44
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              F+ S  L  H R HTG +PF+C  C +AF+   +L +
Sbjct: 45  GWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL 84

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 39/129 (30%)
Query: 4   KLIPNAVFNVAGMPKHLCHVCH--------KNFSSSSALQIHMRTHTGDKPFRCTICQKA 55
           +L+ +      G P+   HVC+        K+F +   L  H+R HTG+KPF C      
Sbjct: 40  ELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPF---- 95
Query: 56  FTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQK 113
                     P                C K F+ S  L+IH RTHTG+KPF+C    C +
Sbjct: 96  ----------PG---------------CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130
Query: 114 AFTTKGNLK 122
            F    + K
Sbjct: 131 RFANSSDRK 139

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 63
          C +C +NFS S  L  H+RTHTG+KPF C IC + F      K
Sbjct: 6  CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 48

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 80  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
           C +C +NFS S  L  H+RTHTG+KPF C IC + F      K
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 48

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 31/104 (29%)
Query: 20  LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHL 79
           +C  C ++F+ S  L IH RTHT ++P+ C IC KAF  + +L+                
Sbjct: 19  ICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR---------------- 62
Query: 80  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                           H   H+ +KPF+C  C K F     L V
Sbjct: 63  ---------------DHRYIHSKEKPFKCQECGKGFCQSRTLAV 91

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
          ++ C  C K+FS SS L  H RTHTG+KP++C  C KAF  + +L
Sbjct: 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 77  KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           ++ C  C K+FS SS L  H RTHTG+KP++C  C KAF  + +L
Sbjct: 18  RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 74  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
           G     C  C K F S+  L IH+RTHTG+KP++C  C+ A   K +L+ 
Sbjct: 1   GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRY 50

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 44  DKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD 103
           DKP++C  CQ +F  KGN  L  +   +    P + C++C   F+  + L+ H R H+G+
Sbjct: 15  DKPYKCDRCQASFRYKGN--LASHKTVHTGEKP-YRCNICGAQFNRPANLKTHTRIHSGE 71
Query: 104 KP 105
           KP
Sbjct: 72  KP 73

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 42  TGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHT 101
           +GDK + C  C K+FT K       +      G+  + C VC K F     L  HM+ HT
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHL---GLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 102 GDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKS 149
           G KP+ C IC K F  + +   R +     S    KA+Q+     G S
Sbjct: 62  GIKPYECNICAKRFMWRDSFH-RHVTSCTKSYEAAKAEQNTTEASGPS 108

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
          C  C K FS SS L  H R HTG+KP++C  C KAF+    L
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 80  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           C  C K FS SS L  H R HTG+KP++C  C KAF+    L
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 11 FNVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
          + V  M  + C V  C + FS S  L  H+R HTG KPF+C IC + F+   +L
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 70  FNVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           + V  M  + C V  C + FS S  L  H+R HTG KPF+C IC + F+   +L
Sbjct: 12  YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
          K++C  C       S L+ H+RTHT  +P+ CT C  +F TKGNL
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNL 45

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 77  KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           K++C  C       S L+ H+RTHT  +P+ CT C  +F TKGNL
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNL 45

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C K F     L  H  +H+G+KP+ C +C   F  K  +     +     G P ++C
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YIC 68
Query: 81  HVCHKNFSSSSALQIHMR-THTG 102
             C K FS    L  H++  H+G
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 20 LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
          +C VC + F+    L+ H R+HT +KP+ C +C +AFT +  L
Sbjct: 4  VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLL 46

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79  LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           +C VC + F+    L+ H R+HT +KP+ C +C +AFT +  L
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLL 46

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 39 RTHTGDKPFRCTICQKAFTTKGNLKL--IPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
          RTH+G+KP+ C IC   FT  G +K+  +     NVA   K  C  C    +  S L +H
Sbjct: 8  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA---KFHCPHCDTVIARKSDLGVH 64
Query: 97 MR 98
          +R
Sbjct: 65 LR 66

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 31/101 (30%)
Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C   ++ +  LQ H+  HTG+KPF C                                 C
Sbjct: 11  CGAAYNKNWKLQAHLSKHTGEKPFPCKE-----------------------------EGC 41
Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLK 122
            K F+S   L  H  THTG+K F C    C   FTTK N+K
Sbjct: 42  EKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-30
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-25
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-23
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-24
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-19
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-24
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-21
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-22
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	9e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	3e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	7e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-04
3iyl_X	1214	VP3; non-enveloped virus, membrane penetration pro	4e-04
3iyl_X	1214	VP3; non-enveloped virus, membrane penetration pro	4e-04

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  104 bits (262), Expect = 8e-30
 Identities = 37/103 (35%), Positives = 52/103 (50%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  CHK F S   L++H R HTG+KPF C  C K +  K NL                 C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            VC + F     L++HM +HTG+ P++C+ C + F  K +L+ 
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQS 112

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 63.3 bits (155), Expect = 8e-14
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 80  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV--REIEINIG 131
           C  CHK F S   L++H R HTG+KPF C  C K +  K NL        +N  
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 97.9 bits (245), Expect = 1e-26
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 23/111 (20%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHL- 79
           C  C K+FS    L  H RTHTG+KP++C  C K+F+ + NL+              H  
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLR-------------AHQR 98

Query: 80  ---------CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
                    C  C K+FS  + L+ H RTHTG+KP++C  C K+F+ + NL
Sbjct: 99  THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL 149

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 96.7 bits (242), Expect = 5e-26
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 23/111 (20%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHL- 79
           C  C K+FS S  L  H RTHTG+KP++C  C K+F+ K +L              +H  
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT-------------RHQR 70

Query: 80  ---------CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
                    C  C K+FS  + L+ H RTHTG+KP+ C  C K+F+   +L
Sbjct: 71  THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.7 bits (203), Expect = 3e-20
 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 31/103 (30%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C K+FS  + L+ H RTHTG+KP++C  C K+                         
Sbjct: 108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS------------------------- 142

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                 FS    L  H RTHTG+KP++C  C K+F+ +  L V
Sbjct: 143 ------FSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV 179

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.2 bits (186), Expect = 7e-18
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 31/94 (32%)

Query: 28  FSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNF 87
              SS+         G+KP+ C  C K+                               F
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKS-------------------------------F 31

Query: 88  SSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           S S  L  H RTHTG+KP++C  C K+F+ K +L
Sbjct: 32  SRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 93.0 bits (232), Expect = 2e-25
 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 29/100 (29%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C+K +   S LQ+H R HTG+KP++C                                 C
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKD-----------------------------C 44

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
            + FS S  L+ H R HTG KPF+C  CQ+ F+   +LK 
Sbjct: 45  ERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT 84

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 87.6 bits (218), Expect = 3e-23
 Identities = 35/101 (34%), Positives = 41/101 (40%), Gaps = 33/101 (32%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S  L+ H R HTG KPF+C  CQ+ F                           
Sbjct: 44  CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF--------------------------- 76

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLK 122
               S S  L+ H RTHTG+KPF C    CQK F     L 
Sbjct: 77  ----SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.5 bits (158), Expect = 2e-14
 Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 29/80 (36%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C + FS S  L+ H RTHTG+KPF C                               
Sbjct: 69  CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS--------------------------- 101

Query: 81  HVCHKNFSSSSALQIHMRTH 100
             C K F+ S  L  H   H
Sbjct: 102 --CQKKFARSDELVRHHNMH 119

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 90.2 bits (225), Expect = 9e-25
 Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 31/99 (31%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C + FS S +L  H+R HTG KPF+C IC +                             
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRN---------------------------- 43

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
              FS S  L  H+RTHTG+KPF C IC + F      K
Sbjct: 44  ---FSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 31/84 (36%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C +NFS S  L  H+RTHTG+KPF C IC +                          
Sbjct: 37  CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK------------------------- 71

Query: 81  HVCHKNFSSSSALQIHMRTHTGDK 104
                 F+ S   + H + H   K
Sbjct: 72  ------FARSDERKRHTKIHLRQK 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 89.1 bits (222), Expect = 7e-24
 Identities = 36/106 (33%), Positives = 44/106 (41%), Gaps = 31/106 (29%)

Query: 19  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKH 78
           H+C  C K F  SS L+ H   HTG+KPF+CT                            
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG------------------------- 69

Query: 79  LCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLK 122
               C K FS    L+ H+R HTGD+P+ C    C K F    NLK
Sbjct: 70  ----CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLK 111

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 77.9 bits (193), Expect = 1e-19
 Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 34/105 (32%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
              C K F  +SA++ H+ TH G +   C  C KAF                        
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAF------------------------ 44

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKV 123
                    SS L+ H   HTG+KPF+CT   C K F+   NL+ 
Sbjct: 45  -------VESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 88.1 bits (219), Expect = 8e-24
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 31/107 (28%)

Query: 18  KHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGM 75
            H C    C K ++ SS L+ H+RTHTG+KP++CT                         
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW------------------------ 50

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
                  C   F+ S  L  H R HTG KPF+C +C ++F+   +L 
Sbjct: 51  -----EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 59.6 bits (145), Expect = 1e-12
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 24 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL 64
          C   F+ S  L  H R HTG KPF+C +C ++F+   +L L
Sbjct: 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL 93

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 89.7 bits (223), Expect = 1e-23
 Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 31/105 (29%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C    K+F +   L  H+R HTG+KPF C                               
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG--------------------------- 97

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKV 123
             C K F+ S  L+IH RTHTG+KPF+C    C + F    + K 
Sbjct: 98  --CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK 140

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 87.3 bits (217), Expect = 7e-23
 Identities = 25/110 (22%), Positives = 35/110 (31%), Gaps = 12/110 (10%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL--------IPNAVFNVAGM 75
              +                        C + F+T   L           P    +V   
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKV 123
            +  C    K+F +   L  H+R HTG+KPF C    C K F    NLK+
Sbjct: 63  EE--CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI 110

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 89.2 bits (222), Expect = 2e-23
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 31/104 (29%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C    + F +   L +HMR HTG+KP +CT                              
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG--------------------------- 74

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLK 122
             C K++S    L+ H+R+HTG+KP+ C    C KAF+   +  
Sbjct: 75  --CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 84.6 bits (210), Expect = 1e-21
 Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 31/108 (28%)

Query: 21  CHVCHKNFSSSSALQIHM---RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPK 77
              C + F S   L  H+     H   K F C                            
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------------ 41

Query: 78  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKV 123
             C    + F +   L +HMR HTG+KP +CT   C+K+++   NLK 
Sbjct: 42  --CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT 87

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 30/80 (37%)

Query: 24  CHKNFSSSSALQIHM-RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV 82
           C K FS++S    H  RTH+ +KP+ C +                               
Sbjct: 105 CSKAFSNASDRAKHQNRTHSNEKPYVCKLPG----------------------------- 135

Query: 83  CHKNFSSSSALQIHMRTHTG 102
           C K ++  S+L+ H++T  G
Sbjct: 136 CTKRYTDPSSLRKHVKTVHG 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 89.2 bits (222), Expect = 3e-23
 Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 27/116 (23%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNL----------KLIPNAVFN 71
           C K F+S   L  H  THTG+K F C    C   FTTK N+          K+       
Sbjct: 50  CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICV----- 104

Query: 72  VAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLKV 123
                 ++CH   C K F   + L++H  +HT   P+ C    C K F+    LK 
Sbjct: 105 ------YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.8 bits (195), Expect = 4e-19
 Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 31/102 (30%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C   ++ +  LQ H+  HTG+KPF C                                 C
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEG-----------------------------C 50

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLKV 123
            K F+S   L  H  THTG+K F C    C   FTTK N+K 
Sbjct: 51  EKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 92

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 70.7 bits (174), Expect = 4e-16
 Identities = 20/98 (20%), Positives = 28/98 (28%), Gaps = 29/98 (29%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C K F   + L++H  +HT   P+ C                                 C
Sbjct: 112 CGKAFKKHNQLKVHQFSHTQQLPYECPHEG-----------------------------C 142

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
            K FS  S L+ H + H G    +   C     T    
Sbjct: 143 DKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 64.9 bits (159), Expect = 6e-14
 Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 31/89 (34%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
                   K + C+                                C   ++ +  LQ H
Sbjct: 3   EKALPVVYKRYICSFAD-----------------------------CGAAYNKNWKLQAH 33

Query: 97  MRTHTGDKPFRCT--ICQKAFTTKGNLKV 123
           +  HTG+KPF C    C+K FT+  +L  
Sbjct: 34  LCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 86.4 bits (215), Expect = 3e-23
 Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 32/102 (31%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C +NFS S  L  H+RTHTG+KPF C IC +                          
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK------------------------- 40

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
                 F+ S   + H        P      ++  +   +L+
Sbjct: 41  ------FARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLE 75

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 85.9 bits (214), Expect = 5e-23
 Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 31/103 (30%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C VC K FS    L+ HMR HTG KP++C  C  A                         
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYA------------------------- 45

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                  + SS+L  H+R H+ ++PF+C IC  A      L V
Sbjct: 46  ------AADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV 82

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 74.4 bits (184), Expect = 2e-18
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 31/88 (35%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C    + SS+L  H+R H+ ++PF+C IC  A                         
Sbjct: 39  CKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYA------------------------- 73

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRC 108
                   +SS L +H+R+HTGD     
Sbjct: 74  ------SRNSSQLTVHLRSHTGDSGPSS 95

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 84.9 bits (211), Expect = 1e-22
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 31/107 (28%)

Query: 18  KHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGM 75
            H C    C K ++ SS L+ H+RTHTG+KP+ C                          
Sbjct: 5   THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG---------------------- 42

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
                  C   F+ S  L  H R HTG +PF+C  C +AF+   +L 
Sbjct: 43  -------CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 82

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 57.5 bits (140), Expect = 5e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 24 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL 64
          C   F+ S  L  H R HTG +PF+C  C +AF+   +L L
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL 83

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 80.2 bits (199), Expect = 1e-20
 Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 31/103 (30%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C ++F+ S  L IH RTHT ++P+ C IC KAF                        
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF------------------------ 55

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                       L+ H   H+ +KPF+C  C K F     L V
Sbjct: 56  -------RRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV 91

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 70.5 bits (174), Expect = 7e-17
 Identities = 19/89 (21%), Positives = 25/89 (28%), Gaps = 31/89 (34%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +CHK F     L+ H   H+ +KPF+C  C K                          
Sbjct: 48  CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG------------------------- 82

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCT 109
                 F  S  L +H   H         
Sbjct: 83  ------FCQSRTLAVHKTLHMQTSSPTAA 105

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 79.8 bits (198), Expect = 1e-20
 Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 33/103 (32%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C K F     L  H  +H+G+KP+ C +C   F                        
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF------------------------ 45

Query: 81  HVCHKNFSSSSALQIHMRTHTG--DKPFRCTICQKAFTTKGNL 121
                       +  H+R+H G   KP+ C  C K F+   +L
Sbjct: 46  -------KRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL 81

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 16/81 (19%), Positives = 23/81 (28%), Gaps = 31/81 (38%)

Query: 41  HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH 100
            +G     C IC K F                                    L  H  +H
Sbjct: 2   SSGSSGVACEICGKIF-------------------------------RDVYHLNRHKLSH 30

Query: 101 TGDKPFRCTICQKAFTTKGNL 121
           +G+KP+ C +C   F  K  +
Sbjct: 31  SGEKPYSCPVCGLRFKRKDRM 51

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 56.3 bits (137), Expect = 2e-11
 Identities = 19/87 (21%), Positives = 26/87 (29%), Gaps = 34/87 (39%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTG--DKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKH 78
           C VC   F     +  H+R+H G   KP+ C  C K                        
Sbjct: 38  CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKG----------------------- 74

Query: 79  LCHVCHKNFSSSSALQIHM-RTHTGDK 104
                   FS    L  H+ + H+G  
Sbjct: 75  --------FSRPDHLNGHIKQVHSGPS 93

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 78.7 bits (195), Expect = 3e-20
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 1/83 (1%)

Query: 34  LQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPK-HLCHVCHKNFSSSSA 92
                RTHTG+KP+ C+ C K F  K  L +      +   +P   +C  C K F+  + 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 93  LQIHMRTHTGDKPFRCTICQKAF 115
           +  H     G           + 
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.5 bits (127), Expect = 4e-10
 Identities = 6/36 (16%), Positives = 10/36 (27%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAF 56
          C  C K F+  + +  H     G           + 
Sbjct: 50 CSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.4 bits (111), Expect = 9e-08
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 93  LQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                RTHTG+KP+ C+ C K F  K  L +
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDM 33

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 79.0 bits (196), Expect = 4e-20
 Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 31/98 (31%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C K+F+  S    HM  H G +P+ C +C K F                           
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF--------------------------- 47

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
                    L  HM+ HTG KP+ C IC K F  + + 
Sbjct: 48  ----KMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF 81

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 76.7 bits (190), Expect = 4e-19
 Identities = 21/101 (20%), Positives = 29/101 (28%), Gaps = 33/101 (32%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C VC K F     L  HM+ HTG KP+ C IC K F  + +                   
Sbjct: 40  CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF------------------ 81

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
                          H    +  K +     ++  T     
Sbjct: 82  ---------------HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 77.6 bits (192), Expect = 6e-20
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 34  LQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSAL 93
                RTH+G+KP+ C IC   FT  G +K +     +   + K  C  C    +  S L
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMK-MHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 94  QIHMRT-HTGDKPF 106
            +H+R  H+   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 2e-11
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 93  LQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                RTH+G+KP+ C IC   FT  G +K+
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKM 33

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 17 PKHLCHVCHKNFSSSSALQIHMRT-HTGDKPF 47
           K  C  C    +  S L +H+R  H+   P 
Sbjct: 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 77.2 bits (191), Expect = 8e-20
 Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 30/93 (32%)

Query: 24  CHKNFSSSSALQIHMR-THTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV 82
           C + FS+   L  H +  H   K F C                                 
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA----------------------------- 45

Query: 83  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAF 115
           C K+F+    L+ HM+ H+  + + C     + 
Sbjct: 46  CGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 57.2 bits (139), Expect = 6e-12
 Identities = 17/85 (20%), Positives = 23/85 (27%), Gaps = 32/85 (37%)

Query: 41  HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR-T 99
            +G     C                                 C + FS+   L  H +  
Sbjct: 2   SSGSSGMPCDFPG-----------------------------CGRIFSNRQYLNHHKKYQ 32

Query: 100 HTGDKPFRCT--ICQKAFTTKGNLK 122
           H   K F C    C K+F  K +LK
Sbjct: 33  HIHQKSFSCPEPACGKSFNFKKHLK 57

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 77.5 bits (192), Expect = 9e-20
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 31/101 (30%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C +C K+F  SS L  H+  H+  +P+ C  C K                          
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKR------------------------- 38

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
                 F   S ++ H   HTG+KP +C +C KAF+   NL
Sbjct: 39  ------FHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL 73

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 58.6 bits (143), Expect = 2e-12
 Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 31/82 (37%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C K F   S ++ H   HTG+KP +C +C KA                         
Sbjct: 32  CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKA------------------------- 66

Query: 81  HVCHKNFSSSSALQIHMRTHTG 102
                 FS SS L  H R HTG
Sbjct: 67  ------FSQSSNLITHSRKHTG 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 74.2 bits (183), Expect = 2e-18
 Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 29/99 (29%)

Query: 24  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC 83
           C K F   + L++H  +HT   P+ C                                 C
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEG-----------------------------C 39

Query: 84  HKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
            K FS  S L+ H + H G    +   C     T     
Sbjct: 40  DKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 78

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 72.9 bits (180), Expect = 4e-18
 Identities = 23/93 (24%), Positives = 28/93 (30%), Gaps = 31/93 (33%)

Query: 31  SSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSS 90
                 H      DKP++C  CQ +F                                  
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASF-------------------------------RYK 30

Query: 91  SALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
             L  H   HTG+KP+RC IC   F    NLK 
Sbjct: 31  GNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 65.2 bits (160), Expect = 4e-15
 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 31/86 (36%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C  +F     L  H   HTG+KP+RC IC                            
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ------------------------- 54

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPF 106
                 F+  + L+ H R H+G+KP+
Sbjct: 55  ------FNRPANLKTHTRIHSGEKPY 74

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 67.9 bits (167), Expect = 3e-16
 Identities = 21/89 (23%), Positives = 28/89 (31%), Gaps = 31/89 (34%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C  + SS +AL+IH R H  D+PF+C  C        NL                  
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLS----------------- 54

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPFRCT 109
                          HM+   GD     +
Sbjct: 55  --------------KHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 66.4 bits (163), Expect = 1e-15
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 31/84 (36%)

Query: 39  RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR 98
            + +   P +C+ C  + ++K                               +AL+IH R
Sbjct: 2   SSGSSGHPEKCSECSYSCSSK-------------------------------AALRIHER 30

Query: 99  THTGDKPFRCTICQKAFTTKGNLK 122
            H  D+PF+C  C        NL 
Sbjct: 31  IHCTDRPFKCNYCSFDTKQPSNLS 54

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 5/26 (19%), Positives = 14/26 (53%)

Query: 98  RTHTGDKPFRCTICQKAFTTKGNLKV 123
            + +   P +C+ C  + ++K  L++
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRI 27

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.3 bits (163), Expect = 1e-15
 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 31/92 (33%)

Query: 30  SSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSS 89
           SS +           + ++C  C K+F                               S 
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSF-------------------------------SH 30

Query: 90  SSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
           SS L  H RTHTG+KP++C  C KAF  + +L
Sbjct: 31  SSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.9 bits (149), Expect = 2e-13
 Identities = 29/86 (33%), Positives = 33/86 (38%), Gaps = 31/86 (36%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C K+FS SS L  H RTHTG+KP++C  C KAF                        
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF------------------------ 56

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPF 106
                     S L  H R HTG  P 
Sbjct: 57  -------IQRSHLIGHHRVHTGSGPS 75

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 2e-15
 Identities = 16/86 (18%), Positives = 24/86 (27%), Gaps = 33/86 (38%)

Query: 39  RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR 98
            T  G+  +RC +C +                                ++  S    H  
Sbjct: 3   FTKEGEHTYRCKVCSRV-------------------------------YTHISNFCRHYV 31

Query: 99  T--HTGDKPFRCTICQKAFTTKGNLK 122
           T      K + C  C K FT K N+ 
Sbjct: 32  TSHKRNVKVYPCPFCFKEFTRKDNMT 57

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 60.3 bits (147), Expect = 2e-13
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 21 CHVCHKNFSSSSALQIHMRT--HTGDKPFRCTICQKAFTTKGNLK 63
          C VC + ++  S    H  T      K + C  C K FT K N+ 
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMT 57

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 5/23 (21%), Positives = 9/23 (39%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTG 43
          C  C K F+    +  H++    
Sbjct: 43 CPFCFKEFTRKDNMTAHVKIIHK 65

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 64.8 bits (157), Expect = 2e-14
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 10/101 (9%)

Query: 29  SSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS 88
           SS S+ +++    TG   FRC  C  A+ T   L +      N  G  +   H    N  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTV----HMNETGHYRDDNHETDNNNP 57

Query: 89  SSS------ALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                    +L          K  +C  C  +F +  +L V
Sbjct: 58  KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSV 98

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.4 bits (152), Expect = 5e-14
 Identities = 14/86 (16%), Positives = 19/86 (22%), Gaps = 34/86 (39%)

Query: 41  HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH 100
            +G    +C IC      K +L                                 H R H
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLN-------------------------------WHQRKH 30

Query: 101 T---GDKPFRCTICQKAFTTKGNLKV 123
                   F C  C K F    ++  
Sbjct: 31  AETVAALRFPCEFCGKRFEKPDSVAA 56

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.3 bits (149), Expect = 2e-13
 Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 3/48 (6%)

Query: 19 HLCHVCHKNFSSSSALQIHMRTHT---GDKPFRCTICQKAFTTKGNLK 63
            C +C       ++L  H R H        F C  C K F    ++ 
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVA 55

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 63.1 bits (153), Expect = 5e-14
 Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 24/96 (25%)

Query: 15  GMPKHLCHVCHKNFSSSSALQIHM-RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVA 73
                    C + FS+   L  H+   H G       +C                     
Sbjct: 22  AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE------------------ 63

Query: 74  GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT 109
                 C    K+F +   L  H+R HTG+K    +
Sbjct: 64  -----ECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.2 bits (149), Expect = 1e-13
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 31/95 (32%)

Query: 28  FSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNF 87
               + L  ++      +P+ C +                               C + F
Sbjct: 3   PHPMNNLLNYVVPKM--RPYACPV-----------------------------ESCDRRF 31

Query: 88  SSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
           S S  L  H+R HTG KPF+C IC + F+   +L 
Sbjct: 32  SRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 56.2 bits (136), Expect = 1e-11
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 24 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL 64
          C + FS S  L  H+R HTG KPF+C IC + F+   +L  
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 31/88 (35%)

Query: 34  LQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSAL 93
                  H+G+KP+ C  C KAF                               S SS L
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAF-------------------------------SRSSIL 30

Query: 94  QIHMRTHTGDKPFRCTICQKAFTTKGNL 121
             H R HTG+KP++C  C KAF+    L
Sbjct: 31  VQHQRVHTGEKPYKCLECGKAFSQNSGL 58

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.8 bits (146), Expect = 5e-13
 Identities = 27/86 (31%), Positives = 31/86 (36%), Gaps = 31/86 (36%)

Query: 21  CHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC 80
           C  C K FS SS L  H R HTG+KP++C  C KAF                        
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF------------------------ 52

Query: 81  HVCHKNFSSSSALQIHMRTHTGDKPF 106
                  S +S L  H R HT     
Sbjct: 53  -------SQNSGLINHQRIHTSGPSS 71

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 58.3 bits (142), Expect = 1e-12
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 19 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
           +C VC + F+    L+ H R+HT +KP+ C +C +AFT +  L
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLL 46

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 58.3 bits (142), Expect = 1e-12
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 78  HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 121
            +C VC + F+    L+ H R+HT +KP+ C +C +AFT +  L
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLL 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 55.8 bits (135), Expect = 9e-12
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 29/73 (39%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF CT                                C   FS S  L  H
Sbjct: 3   SGSSGTGEKPFACTW-----------------------------PGCGWRFSRSDELSRH 33

Query: 97  MRTHTGDKPFRCT 109
            R+H+G KP   +
Sbjct: 34  RRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.4 bits (108), Expect = 8e-08
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 24 CHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C   FS S  L  H R+H+G KP   +
Sbjct: 20 CGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 96  HMRTHTGDKPFRCT--ICQKAFTTKGNLK 122
              + TG+KPF CT   C   F+    L 
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELS 31

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 55.4 bits (133), Expect = 3e-11
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 30  SSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSS 89
           SS +     + H GD+  +C+ C   F  +  L          +     +C  C K+   
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTL----------SRRKTPMCEKCRKDSCQ 51

Query: 90  SSALQIHMRTHTGDKPF 106
            +AL       +G K  
Sbjct: 52  EAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 89  SSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVRE 125
           SS +     + H GD+  +C+ C   F  +  L  R+
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK 38

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.0 bits (131), Expect = 3e-11
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG+KP+ C  CQKAF TK                               S L +
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTK-------------------------------SNLMV 30

Query: 96  HMRTHTGDKPFRC 108
           H RTHTG+     
Sbjct: 31  HQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               + TG+KP+ C  CQKAF TK NL V
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMV 30

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C+ C K F++ S L +H RTHTG+     
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 32/82 (39%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +  KP+ C  C K F                               S    L  H
Sbjct: 3   SGSSGSVGKPYICQSCGKGF-------------------------------SRPDHLNGH 31

Query: 97  M-RTHTGDKPFRCTICQKAFTT 117
           + + HT ++P +C +     ++
Sbjct: 32  IKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.4 bits (124), Expect = 5e-10
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 21 CHVCHKNFSSSSALQIHM-RTHTGDKPFRCTICQKAFTT 58
          C  C K FS    L  H+ + HT ++P +C +     ++
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 7/27 (25%), Positives = 12/27 (44%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLK 122
              + +  KP+ C  C K F+   +L 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLN 29

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG KP+ C  C KAF                                S S L IH
Sbjct: 3   SGSSGTGMKPYVCNECGKAF-------------------------------RSKSYLIIH 31

Query: 97  MRTHTGDKPFRC 108
            RTHTG+     
Sbjct: 32  TRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C+ C K F S S L IH RTHTG+     
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG KP+ C  C KAF +K  L +
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLII 30

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 1e-10
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+KP+ C+ C KAF                               SS S L IH
Sbjct: 3   SGSSGAGEKPYGCSECGKAF-------------------------------SSKSYLIIH 31

Query: 97  MRTHTGDKPFRCT 109
           MRTH+G+KP   +
Sbjct: 32  MRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K FSS S L IHMRTH+G+KP   +
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G+KP+ C+ C KAF++K  L +
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLII 30

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 15/70 (21%), Positives = 19/70 (27%), Gaps = 31/70 (44%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+KP+ C IC   F     LK                                H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLK-------------------------------SH 30

Query: 97  MRTHTGDKPF 106
           +R HTG  P 
Sbjct: 31  LRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPF 47
          C +C   F     L+ H+R HTG  P 
Sbjct: 14 CEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 44.0 bits (105), Expect = 3e-07
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G+KP+ C IC   F     LK 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKS 29

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 53.2 bits (128), Expect = 1e-10
 Identities = 22/94 (23%), Positives = 31/94 (32%), Gaps = 31/94 (32%)

Query: 31  SSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSS 90
           SS         +  +   C+               P                C K +  S
Sbjct: 2   SSGSSGPQIDSSRIRSHICSH--------------PG---------------CGKTYFKS 32

Query: 91  SALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLK 122
           S L+ H RTHTG+KPF C+   C++ F     L 
Sbjct: 33  SHLKAHTRTHTGEKPFSCSWKGCERRFARSDELS 66

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.4 bits (126), Expect = 3e-10
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 31/85 (36%)

Query: 18  KHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGM 75
            H+C    C K +  SS L+ H RTHTG+KPF C+                         
Sbjct: 17  SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSW------------------------ 52

Query: 76  PKHLCHVCHKNFSSSSALQIHMRTH 100
                  C + F+ S  L  H RTH
Sbjct: 53  -----KGCERRFARSDELSRHRRTH 72

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C+ C KAFT K                               S L IH
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRK-------------------------------SGLHIH 31

Query: 97  MRTHTGDKPFRCT 109
            ++HTG++    +
Sbjct: 32  QQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KP++C+ C KAFT K  L +
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHI 30

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+  S L IH ++HTG++    +
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 2e-10
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG +P+ C  C KA                               F + S+L  H
Sbjct: 3   SGSSGTGQRPYECIECGKA-------------------------------FKTKSSLICH 31

Query: 97  MRTHTGDKPFRCT 109
            R+HTG+KP   +
Sbjct: 32  RRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F + S+L  H R+HTG+KP   +
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG +P+ C  C KAF TK +L
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSL 28

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-10
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF C+ CQKAF TK NL                                +H
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNL-------------------------------IVH 31

Query: 97  MRTHTGDKPFRCT 109
            RTHTG+KP   +
Sbjct: 32  QRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-07
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F++ S L +H RTHTG+KP   +
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KPF C+ CQKAF TK NL
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNL 28

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-10
 Identities = 15/72 (20%), Positives = 21/72 (29%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF+C  C                                  FS S +L  H
Sbjct: 3   SGSSGTGEKPFQCKECGMN-------------------------------FSWSCSLFKH 31

Query: 97  MRTHTGDKPFRC 108
           +R+H    P   
Sbjct: 32  LRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C  C  NFS S +L  H+R+H    P   
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.3 bits (95), Expect = 6e-06
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLK 122
              + TG+KPF+C  C   F+   +L 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLF 29

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-10
 Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + +G+KP+ C  C K F                               S  S L  
Sbjct: 2   SSGSSGSGEKPYGCNECGKTF-------------------------------SQKSILSA 30

Query: 96  HMRTHTGDKPFRCT 109
           H RTHTG+KP   +
Sbjct: 31  HQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K FS  S L  H RTHTG+KP   +
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               + +G+KP+ C  C K F+ K  L  
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSA 30

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.4 bits (124), Expect = 4e-10
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG KPF CT C K+F  KGN                               L  
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGN-------------------------------LVT 30

Query: 96  HMRTHTGDKPFRCT 109
           H R HTG+K    +
Sbjct: 31  HQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               + TG KPF CT C K+F  KGNL  
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVT 30

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+F +   L  H R HTG+K    +
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-10
 Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP +CT C KAF  K                               S L +H
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWK-------------------------------SQLIMH 31

Query: 97  MRTHTGDKPFRCT 109
            RTH  DK    +
Sbjct: 32  QRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F   S L +H RTH  DK    +
Sbjct: 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KP +CT C KAF  K  L +
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIM 30

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-10
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C+ C K+FT K                               S L+IH
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWK-------------------------------SRLRIH 31

Query: 97  MRTHTGDKPFRCT 109
            + HTG++    +
Sbjct: 32  QKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KP++C+ C K+FT K  L++
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRI 30

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+F+  S L+IH + HTG++    +
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 51.0 bits (123), Expect = 6e-10
 Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF+C  C K F                               S  SAL +H
Sbjct: 3   SGSSGTGEKPFKCVECGKGF-------------------------------SRRSALNVH 31

Query: 97  MRTHTGDKPFRCT 109
            + HTG+KP   +
Sbjct: 32  HKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K FS  SAL +H + HTG+KP   +
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KPF+C  C K F+ +  L V
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNV 30

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-10
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG+KP+ C++C KAF                               S   +L +
Sbjct: 2   SSGSSGTGEKPYECSVCGKAF-------------------------------SHRQSLSV 30

Query: 96  HMRTHTGDKPFRCT 109
           H R H+G KP   +
Sbjct: 31  HQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C VC K FS   +L +H R H+G KP   +
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               + TG+KP+ C++C KAF+ + +L V
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSV 30

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 7e-10
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG+KP+ C+IC K+FT K                               S L +
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKK-------------------------------SQLHV 30

Query: 96  HMRTHTGDKPFRCT 109
           H + HTG+KP   +
Sbjct: 31  HQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C +C K+F+  S L +H + HTG+KP   +
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               + TG+KP+ C+IC K+FT K  L V
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHV 30

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 7e-10
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF+C IC K+F                                  S L  H
Sbjct: 3   SGSSGTGEKPFKCDICGKSF-------------------------------CGRSRLNRH 31

Query: 97  MRTHTGDKPFRCT 109
              HT +KP   +
Sbjct: 32  SMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C +C K+F   S L  H   HT +KP   +
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KPF+C IC K+F  +  L
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRL 28

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 50.6 bits (122), Expect = 8e-10
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG KP+ C+ C K F+ K                               S L +H
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLK-------------------------------SQLIVH 31

Query: 97  MRTHTGDKPFRCT 109
            R+HTG KP   +
Sbjct: 32  QRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K FS  S L +H R+HTG KP   +
Sbjct: 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG KP+ C+ C K F+ K  L V
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIV 30

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.6 bits (122), Expect = 8e-10
 Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 31/70 (44%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+KP++C  C   F    +L+                                H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLR-------------------------------AH 30

Query: 97  MRTHTGDKPF 106
           +  HTG  P 
Sbjct: 31  VLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLK 122
              +  G+KP++C  C   F    +L+
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLR 28

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPF 47
          C  C   F   + L+ H+  HTG  P 
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSGPS 40

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 9e-10
 Identities = 15/72 (20%), Positives = 20/72 (27%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KP+ C  C KAF                                  S L +H
Sbjct: 3   SGSSGSGEKPYECNECGKAF-------------------------------IWKSLLIVH 31

Query: 97  MRTHTGDKPFRC 108
            RTH G      
Sbjct: 32  ERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C+ C K F   S L +H RTH G      
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + +G+KP+ C  C KAF  K  L V
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIV 30

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF C  C K+F                               S SS L  H
Sbjct: 3   SGSSGTGEKPFECAECGKSF-------------------------------SISSQLATH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+FS SS L  H R HTG+KP   +
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KPF C  C K+F+    L  
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLAT 30

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               +  G+K ++C +C K F                               S SS LQ 
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEF-------------------------------SQSSHLQT 30

Query: 96  HMRTHTGDKPFRCT 109
           H R HTG+KP   +
Sbjct: 31  HQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 17/30 (56%), Positives = 19/30 (63%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C VC K FS SS LQ H R HTG+KP   +
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNL 121
               +  G+K ++C +C K F+   +L
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHL 28

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C KAF                                + S+L IH
Sbjct: 3   SGSSGTGEKPYKCNECGKAF-------------------------------RARSSLAIH 31

Query: 97  MRTHTGDKPFRCT 109
             TH+G+KP   +
Sbjct: 32  QATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F + S+L IH  TH+G+KP   +
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KP++C  C KAF  + +L +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAI 30

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG++ + C+ C KAF                               +  S L +H
Sbjct: 3   SGSSGTGERHYECSECGKAF-------------------------------ARKSTLIMH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+  S L +H R HTG+KP   +
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG++ + C+ C KAF  K  L
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTL 28

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG+KP++C  C K +                               +S   L +
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGY-------------------------------NSKFNLDM 30

Query: 96  HMRTHTGDKPFRCT 109
           H + HTG++P   +
Sbjct: 31  HQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K ++S   L +H + HTG++P   +
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
               + TG+KP++C  C K + +K NL +
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDM 30

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C +C KAF                                 S+ L  H
Sbjct: 3   SGSSGTGEKPYSCNVCGKAF-------------------------------VLSAHLNQH 31

Query: 97  MRTHTGDKPFRCT 109
           +R HT +     +
Sbjct: 32  LRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+VC K F  S+ L  H+R HT +     +
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C +C KAF    +L
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHL 28

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG+KP+ C +C+KAF                               S  ++L  
Sbjct: 2   SSGSSGTGEKPYECDVCRKAF-------------------------------SHHASLTQ 30

Query: 96  HMRTHTGDKPFRCT 109
           H R H+G+KP   +
Sbjct: 31  HQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C VC K FS  ++L  H R H+G+KP   +
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNL 121
               + TG+KP+ C +C+KAF+   +L
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASL 28

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+ PF C+ C K FT K N                               L IH
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTN-------------------------------LIIH 31

Query: 97  MRTHTGDKPFRCT 109
            + HTG++P   +
Sbjct: 32  QKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+ PF C+ C K FT K NL
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNL 28

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+  + L IH + HTG++P   +
Sbjct: 15 CSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+K + C  C K+F                               S +  L  H
Sbjct: 3   SGSSGTGEKLYNCKECGKSF-------------------------------SRAPCLLKH 31

Query: 97  MRTHTGDKPFRCT 109
            R H+G+KP   +
Sbjct: 32  ERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+FS +  L  H R H+G+KP   +
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+K + C  C K+F+    L
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCL 28

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C +C K+F                                  S+L +H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSF-------------------------------RYGSSLTVH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C VCHK+F   S+L +H R HTG+KP   +
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KP++C +C K+F    +L V
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTV 30

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KPF+C  C K F                                ++S    H
Sbjct: 3   SGSSGSGEKPFKCEECGKGF-------------------------------YTNSQCYSH 31

Query: 97  MRTHTGDKPFRCT 109
            R+H+G+KP   +
Sbjct: 32  QRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F ++S    H R+H+G+KP   +
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KPF+C  C K F T    
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQC 28

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG K F CT C KAFT K                               S L +H
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRK-------------------------------STLSMH 31

Query: 97  MRTHTGDKPFRCT 109
            + HTG+KP   +
Sbjct: 32  QKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+  S L +H + HTG+KP   +
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 13/26 (50%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG K F CT C KAFT K  L
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTL 28

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 19/73 (26%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF C  C KAF                               S    L  H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAF-------------------------------SDHIGLNQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  RRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K FS    L  H R HTG+KP   +
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KPF C  C KAF+    L
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGL 28

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-09
 Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + + +KP++C  C K +  + NL                                +H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNL-------------------------------DMH 31

Query: 97  MRTHTGDKPFRCT 109
            R H G+K    +
Sbjct: 32  QRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K ++    L +H R H G+K    +
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 7/26 (26%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + + +KP++C  C K +  + NL
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNL 28

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KP++C  C K +  + +L                                 H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDL-------------------------------DFH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+K    +
Sbjct: 32  QRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K +     L  H R HTG+K    +
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + +G+KP++C  C K +  + +L  
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDF 30

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 17/73 (23%), Positives = 22/73 (30%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+ P+ C  C KAF                               S    L  H
Sbjct: 3   SGSSGTGENPYECHECGKAF-------------------------------SRKYQLISH 31

Query: 97  MRTHTGDKPFRCT 109
            RTH G+KP   +
Sbjct: 32  QRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          CH C K FS    L  H RTH G+KP   +
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+ P+ C  C KAF+ K  L
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQL 28

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                                    L  H
Sbjct: 3   SGSSGTGEKPYKCEECGKGF-------------------------------ICRRDLYTH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG+KP   +
Sbjct: 32  HMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F     L  H   HTG+KP   +
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K F  + +L
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDL 28

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+K ++C  C   F                               S +S+L++H
Sbjct: 3   SGSSGMGEKTWKCRECDMCF-------------------------------SQASSLRLH 31

Query: 97  MRTHTGDKPFRCT 109
              H G+KP   +
Sbjct: 32  QNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C   FS +S+L++H   H G+KP   +
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 6/28 (21%), Positives = 14/28 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G+K ++C  C   F+   +L++
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRL 30

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C+ C K+F  K                               S L +H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKK-------------------------------SQLHVH 31

Query: 97  MRTHTGDKPFRC 108
            R HTG+ P   
Sbjct: 32  QRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C  C K+F   S L +H R HTG+ P   
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG+KP+ C+ C K+F  K  L V
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHV 30

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP  C  C K+F                               S +S L +H
Sbjct: 3   SGSSGTGEKPHECRECGKSF-------------------------------SFNSQLIVH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+ P   +
Sbjct: 32  QRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+FS +S L +H R HTG+ P   +
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP  C  C K+F+    L
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQL 28

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G  P++C+ C+K+F+ K                                 L +H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGK-------------------------------LRLLVH 31

Query: 97  MRTHTGDKPFRCT 109
            R HT +KP   +
Sbjct: 32  QRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+FS    L +H R HT +KP   +
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G  P++C+ C+K+F+ K  L V
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLV 30

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KPF+C  C K F                               + +S L  H
Sbjct: 3   SGSSGSGEKPFKCEECGKRF-------------------------------TQNSQLHSH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+ +S L  H R HTG+KP   +
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KPF+C  C K FT    L
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQL 28

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G K F+C  C+K F                               + SS+L +H
Sbjct: 3   SGSSGAGKKLFKCNECKKTF-------------------------------TQSSSLTVH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ SS+L +H R HTG+KP   +
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G K F+C  C+K FT   +L V
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTV 30

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 11/73 (15%), Positives = 20/73 (27%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G++P+ C  C K F                                  S L  H
Sbjct: 3   SGSSGSGERPYGCNECGKNF-------------------------------GRHSHLIEH 31

Query: 97  MRTHTGDKPFRCT 109
           ++ H  +K    +
Sbjct: 32  LKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C KNF   S L  H++ H  +K    +
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G++P+ C  C K F    +L
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHL 28

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 31/71 (43%)

Query: 39  RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR 98
              +G+KPF C+ C+KAF++K                               S L +H +
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSK-------------------------------SYLLVHQQ 31

Query: 99  THTGDKPFRCT 109
           TH  +KP   +
Sbjct: 32  THAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K FSS S L +H +TH  +KP   +
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 7e-05
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 98  RTHTGDKPFRCTICQKAFTTKGNLKV 123
              +G+KPF C+ C+KAF++K  L V
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLV 28

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-09
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C  C KAF                               S  S+L  H
Sbjct: 3   SGSSGTGEKPYECNQCGKAF-------------------------------SVRSSLTTH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG KP   +
Sbjct: 32  QAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K FS  S+L  H   HTG KP   +
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C  C KAF+ + +L
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSL 28

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.3 bits (116), Expect = 6e-09
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 31/70 (44%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+KP+RC  C KA                               FS   +L +H
Sbjct: 2   SSGSSGGEKPYRCDQCGKA-------------------------------FSQKGSLIVH 30

Query: 97  MRTHTGDKPF 106
           +R HTG  P 
Sbjct: 31  IRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.6 bits (101), Expect = 9e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G+KP+RC  C KAF+ KG+L V
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIV 29

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPF 47
          C  C K FS   +L +H+R HTG  P 
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-09
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C +C KAF                               +  + L  H
Sbjct: 3   SGSSGTGEKPYECKVCSKAF-------------------------------TQKAHLAQH 31

Query: 97  MRTHTGDKPFRCT 109
            +THTG+KP   +
Sbjct: 32  QKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C VC K F+  + L  H +THTG+KP   +
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 9e-06
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C +C KAFT K +L
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHL 28

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+RC  C KAFT + N                               L  H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSN-------------------------------LFTH 31

Query: 97  MRTHTGDKPFRC 108
            + HTG+KP   
Sbjct: 32  QKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+RC  C KAFT + NL
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNL 28

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C  C K F+  S L  H + HTG+KP   
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C  C KAF                               +  S L  H
Sbjct: 3   SGSSGTGEKPYICAECGKAF-------------------------------TIRSNLIKH 31

Query: 97  MRTHTGDKPFRCT 109
            + HT  KP   +
Sbjct: 32  QKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+  S L  H + HT  KP   +
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C  C KAFT + NL
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNL 28

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-09
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG++ + C+ C KAF  K                               S L +H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQK-------------------------------STLSMH 31

Query: 97  MRTHTGDKPFRCT 109
            R H G+KP   +
Sbjct: 32  QRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F   S L +H R H G+KP   +
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 9e-06
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + TG++ + C+ C KAF  K  L +
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSM 30

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-09
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KPF+C  C K F                               + +S L  H
Sbjct: 3   SGSSGSGEKPFQCEECGKRF-------------------------------TQNSHLHSH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+ +S L  H R HTG+KP   +
Sbjct: 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KPF+C  C K FT   +L
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHL 28

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 9e-09
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C  C K+F                                  S L  H
Sbjct: 3   SGSSGTGEKPYICNECGKSF-------------------------------IQKSHLNRH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  RRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K+F   S L  H R HTG+KP   +
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 3e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C  C K+F  K +L
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHL 28

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 9e-09
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 31/74 (41%)

Query: 36  IHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQI 95
               + TG KP++C  C KAF                               S +S L  
Sbjct: 2   SSGSSGTGGKPYQCNECGKAF-------------------------------SQTSKLAR 30

Query: 96  HMRTHTGDKPFRCT 109
           H R HTG+KP   +
Sbjct: 31  HQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K FS +S L  H R HTG+KP   +
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 95  IHMRTHTGDKPFRCTICQKAFTTKGNL 121
               + TG KP++C  C KAF+    L
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKL 28

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG++P+ CT+C KAFT +                               S L  H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDR-------------------------------SNLIKH 31

Query: 97  MRTHTGDKPFRC 108
            + HTG+KP   
Sbjct: 32  QKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C VC K F+  S L  H + HTG+KP   
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG++P+ CT+C KAFT + NL
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNL 28

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG++P +C  C K+F                                 S+ L  H
Sbjct: 3   SGSSGTGERPHKCNECGKSF-------------------------------IQSAHLIQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K+F  S+ L  H R HTG+KP   +
Sbjct: 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG++P +C  C K+F    +L
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHL 28

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KP+ C  C KAF                                 S+ L  H
Sbjct: 3   SGSSGSGEKPYVCDYCGKAF-------------------------------GLSAELVRH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F  S+ L  H R HTG+KP   +
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 7e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KP+ C  C KAF     L
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAEL 28

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C  C KAF                               S ++ L  H
Sbjct: 3   SGSSGTGEKPYECKECGKAF-------------------------------SQTTHLIQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K FS ++ L  H R HTG+KP   +
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C  C KAF+   +L
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHL 28

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.6 bits (114), Expect = 1e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C  C K+F                                 +S L  H
Sbjct: 3   SGSSGTGEKPYNCKECGKSF-------------------------------RWASCLLKH 31

Query: 97  MRTHTGDKPFRCT 109
            R H+G+KP   +
Sbjct: 32  QRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+F  +S L  H R H+G+KP   +
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.2 bits (87), Expect = 9e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C  C K+F     L
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCL 28

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+ C  C KAF                                  S LQ H
Sbjct: 3   SGSSGTGEKPYNCEECGKAF-------------------------------IHDSQLQEH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F   S LQ H R HTG+KP   +
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+ C  C KAF     L
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQL 28

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C KAF                               S +S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKAF-------------------------------SQTSKLARH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K FS +S L  H R HTG+KP   +
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C KAF+    L
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKL 28

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG KP+ C  C KAF                               S  S+L  H
Sbjct: 3   SGSSGTGVKPYMCNECGKAF-------------------------------SVYSSLTTH 31

Query: 97  MRTHTGDKPFRC 108
              HTG+KP   
Sbjct: 32  QVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C+ C K FS  S+L  H   HTG+KP   
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG KP+ C  C KAF+   +L
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSL 28

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KP++C+ C KAF                                  + L  H
Sbjct: 3   SGSSGSGEKPYKCSECGKAF-------------------------------HRHTHLNEH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG +P   +
Sbjct: 32  RRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F   + L  H R HTG +P   +
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KP++C+ C KAF    +L
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHL 28

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/72 (18%), Positives = 18/72 (25%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+ P+ C  C K F                               S    L  H
Sbjct: 3   SGSSGTGENPYECCECGKVF-------------------------------SRKDQLVSH 31

Query: 97  MRTHTGDKPFRC 108
            +TH+G      
Sbjct: 32  QKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C  C K FS    L  H +TH+G      
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+ P+ C  C K F+ K  L
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQL 28

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C KAF                                 +S+   H
Sbjct: 3   SGSSGTGEKPYKCMECGKAF-------------------------------GDNSSCTQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG +P   +
Sbjct: 32  QRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F  +S+   H R HTG +P   +
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C KAF    + 
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSC 28

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP+RC  C KAF                               +  + L  H
Sbjct: 3   SGSSGTGEKPYRCGECGKAF-------------------------------AQKANLTQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F+  + L  H R HTG+KP   +
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP+RC  C KAF  K NL
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANL 28

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+KP++C+ C K+F                               S S  L  H
Sbjct: 3   SGSSGEGEKPYQCSECGKSF-------------------------------SGSYRLTQH 31

Query: 97  MRTHTGDKPFRCT 109
             THT +KP   +
Sbjct: 32  WITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+FS S  L  H  THT +KP   +
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              +  G+KP++C+ C K+F+    L
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRL 28

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                                 +S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------------------RHNSYLSRH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F  +S L  H R HTG+KP   +
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K F     L
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYL 28

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KPF+C  C KAF                                 +  L  H
Sbjct: 3   SGSSGSGEKPFKCKECGKAF-------------------------------RQNIHLASH 31

Query: 97  MRTHTGDKPFRCT 109
           +R HTG+KP   +
Sbjct: 32  LRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F  +  L  H+R HTG+KP   +
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 8e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KPF+C  C KAF    +L
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHL 28

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C KAF                                + S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKAF-------------------------------RAHSNLTTH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG+KP   +
Sbjct: 32  QVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F + S L  H   HTG+KP   +
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C KAF    NL
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNL 28

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KPF+C  C K++                               +    L  H
Sbjct: 3   SGSSGTGEKPFKCGECGKSY-------------------------------NQRVHLTQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K+++    L  H R HTG+KP   +
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KPF+C  C K++  + +L
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHL 28

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                                 +S L  H
Sbjct: 3   SGSSGTGEKPYKCHECGKVF-------------------------------RRNSHLARH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG+KP   +
Sbjct: 32  QLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          CH C K F  +S L  H   HTG+KP   +
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K F    +L
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHL 28

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C +C KAF                                 SS L  H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAF-------------------------------RVSSHLVQH 31

Query: 97  MRTHTGDKPFRCT 109
              H+G++P   +
Sbjct: 32  HSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C VC K F  SS L  H   H+G++P   +
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 9e-05
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C +C KAF    +L
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHL 28

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+K ++C  C K F                               S +S L  H
Sbjct: 3   SGSSGTGEKRYKCNECGKVF-------------------------------SRNSQLSQH 31

Query: 97  MRTHTGDKPFRCT 109
            + HTG+KP   +
Sbjct: 32  QKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K FS +S L  H + HTG+KP   +
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+K ++C  C K F+    L
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQL 28

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+KP++C  C K F                               + +S L  H
Sbjct: 3   SGSSGSGEKPYKCNECGKVF-------------------------------TQNSHLTNH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  WRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ +S L  H R HTG+KP   +
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G+KP++C  C K FT   +L
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHL 28

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G++PF+C  C K F  +                               S L  H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRR-------------------------------SHLAGH 31

Query: 97  MRTHTGDKPFRCT 109
           +R H+ +K    +
Sbjct: 32  LRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F   S L  H+R H+ +K    +
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 9e-05
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G++PF+C  C K F  + +L
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHL 28

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                               + +S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------------------TQNSHLVRH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG+KP   +
Sbjct: 32  RGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ +S L  H   HTG+KP   +
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K FT   +L
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHL 28

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                               + +S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------------------TQNSHLARH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG+KP   +
Sbjct: 32  RGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ +S L  H   HTG+KP   +
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K FT   +L
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHL 28

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                               + +S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------------------TQNSHLARH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG KP   +
Sbjct: 32  RRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ +S L  H R HTG KP   +
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K FT   +L
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHL 28

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G++  RC+ C K F                                 +S    H
Sbjct: 3   SGSSGHGERGHRCSDCGKFF-------------------------------LQASNFIQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  RRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C  C K F  +S    H R HTG+KP   +
Sbjct: 15 CSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              +  G++  RC+ C K F    N 
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNF 28

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG+KP++C  C K F                               + +S L  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------------------TQNSHLANH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG KP   +
Sbjct: 32  QRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ +S L  H R HTG KP   +
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 9e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG+KP++C  C K FT   +L
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHL 28

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG KP++C  C K F                               + +S L  H
Sbjct: 3   SGSSGTGKKPYKCNECGKVF-------------------------------TQNSHLARH 31

Query: 97  MRTHTGDKPFRCT 109
              HTG+KP   +
Sbjct: 32  RGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          C+ C K F+ +S L  H   HTG+KP   +
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG KP++C  C K FT   +L
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHL 28

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 8e-08
 Identities = 13/72 (18%), Positives = 19/72 (26%), Gaps = 31/72 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G KP+ C  C+K F                                    L  H
Sbjct: 3   SGSSGSGKKPYECKECRKTF-------------------------------IQIGHLNQH 31

Query: 97  MRTHTGDKPFRC 108
            R HTG++    
Sbjct: 32  KRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C  C K F     L  H R HTG++    
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +G KP+ C  C+K F   G+L
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHL 28

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 1e-07
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 63
          K++C  C       S L+ H+RTHT  +P+ CT C  +F TKGNL 
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT 46

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 1e-07
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query: 77  KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
           K++C  C       S L+ H+RTHT  +P+ CT C  +F TKGNL 
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT 46

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 13/70 (18%), Positives = 19/70 (27%), Gaps = 31/70 (44%)

Query: 39  RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR 98
              +G+ P+ C+ C KAF                               +    L  H R
Sbjct: 3   SGSSGENPYECSECGKAF-------------------------------NRKDQLISHQR 31

Query: 99  THTGDKPFRC 108
           TH G+     
Sbjct: 32  THAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
          C  C K F+    L  H RTH G+     
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 98  RTHTGDKPFRCTICQKAFTTKGNL 121
              +G+ P+ C+ C KAF  K  L
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQL 26

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +  K  +C  C + FT K                               S L  H
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLK-------------------------------SHLNQH 31

Query: 97  MRTHTGDKPFRCT 109
            R HTG+KP   +
Sbjct: 32  QRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 19 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          H CH C + F+  S L  H R HTG+KP   +
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + +  K  +C  C + FT K +L
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHL 28

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 31/73 (42%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + +G+K                                H C  C KNF   SAL+IH
Sbjct: 3   SGSSGSGEKS-------------------------------HTCDECGKNFCYISALRIH 31

Query: 97  MRTHTGDKPFRCT 109
            R H G+K    +
Sbjct: 32  QRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.6 bits (101), Expect = 8e-07
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 19 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT 50
          H C  C KNF   SAL+IH R H G+K    +
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              + +G+K   C  C K F     L++
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRI 30

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 44.2 bits (105), Expect = 2e-07
 Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 31/70 (44%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              +  G+ P+ C  C K+FT +G+L                                +H
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLA-------------------------------VH 30

Query: 97  MRTHTGDKPF 106
            R+ +   P 
Sbjct: 31  QRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.3 bits (95), Expect = 6e-06
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 19 HLCHVCHKNFSSSSALQIHMRTHTGDKPF 47
          +LC  C K+F+   +L +H R+ +   P 
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
              +  G+ P+ C  C K+FT +G+L V
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAV 29

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 32/74 (43%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
              + TG KP+ C  C KAF                                 +++L  H
Sbjct: 3   SGSSGTGKKPYECIECGKAF-------------------------------IQNTSLIRH 31

Query: 97  MR-THTGDKPFRCT 109
            R  HTG+KP   +
Sbjct: 32  WRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 21 CHVCHKNFSSSSALQIHMR-THTGDKPFRCT 50
          C  C K F  +++L  H R  HTG+KP   +
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + TG KP+ C  C KAF    +L
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSL 28

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.2 bits (104), Expect = 3e-07
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC 52
          +  C +C K F     L  H  +H+G+KP+     
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.2 bits (104), Expect = 3e-07
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 77  KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC 111
           +  C +C K F     L  H  +H+G+KP+     
Sbjct: 12  QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.8 bits (105), Expect = 3e-06
 Identities = 12/72 (16%), Positives = 20/72 (27%)

Query: 29  SSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS 88
             S +  +     +  KP    I +                   +    + CHVC     
Sbjct: 132 ELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLF 191

Query: 89  SSSALQIHMRTH 100
           S   L  H+ +H
Sbjct: 192 SPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 13  VAGMPKHLCHVCHKNFSSSSALQIHMRTH 41
            +    + CHVC     S   L  H+ +H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 37 HMRTHTGDKPFRCTICQKAFT 57
            R  TG KPF+C  C ++F+
Sbjct: 2  STRGSTGIKPFQCPDCDRSFS 22

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 96  HMRTHTGDKPFRCTICQKAFT 116
             R  TG KPF+C  C ++F+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFS 22

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 37 HMRTHTGDKPFRCTICQKAFTTKGNL 62
             + T  K + C  C KAFT   +L
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHL 28

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNL 121
              + T  K + C  C KAFT   +L
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHL 28

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 31/68 (45%)

Query: 39  RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR 98
              +G + + C  C K+F                                   +L +H R
Sbjct: 3   SGSSGQRVYECQECGKSF-------------------------------RQKGSLTLHER 31

Query: 99  THTGDKPF 106
            HTG  P 
Sbjct: 32  IHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.6 bits (88), Expect = 7e-05
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPF 47
          C  C K+F    +L +H R HTG  P 
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 34.9 bits (81), Expect = 6e-04
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 98  RTHTGDKPFRCTICQKAFTTKGNL 121
              +G + + C  C K+F  KG+L
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSL 26

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 24 CHKNFSSSSALQIHMRTHTGDK 45
          C K F+ S  LQ H RTHTG+K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 83  CHKNFSSSSALQIHMRTHTGDK 104
           C K F+ S  LQ H RTHTG+K
Sbjct: 10  CGKRFTRSDELQRHKRTHTGEK 31

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 23/106 (21%)

Query: 3   GKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL 62
            +L P     +  + K L H  +      S+    +        F C +C   F++  +L
Sbjct: 33  HQLTPEQKRLIRAIVKTLIH--NPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSL 90

Query: 63  KLIPNAVFNVAGMPKHL--------CHVCHKNFSSSSALQIHMRTH 100
           K             +H+        C VC K F+S+ +   H+   
Sbjct: 91  K-------------QHIRYTEHTKVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 14  AGMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTK-GNLKLIPNAVF 70
           +G  K+L +      + +     + H  T    +  R  +       +  +       + 
Sbjct: 8   SGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL 67

Query: 71  NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 122
               + + +C +C   FSSS +L+ H+R         C +C+K FT+  +  
Sbjct: 68  ASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSAL 117

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 18 KHLCHV--CHKNFSSSSALQIHMRTHTGDK 45
          +H+CH+  C K +  +S L+ H+R HTG++
Sbjct: 8  QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 77  KHLCHV--CHKNFSSSSALQIHMRTHTGDK 104
           +H+CH+  C K +  +S L+ H+R HTG++
Sbjct: 8   QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 31/70 (44%)

Query: 39  RTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR 98
              +G+KP+ C  C++                                FS ++ L  H +
Sbjct: 3   SGSSGEKPYSCAECKET-------------------------------FSDNNRLVQHQK 31

Query: 99  THTGDKPFRC 108
            HT       
Sbjct: 32  MHTVKSGPSS 41

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 37.2 bits (85), Expect = 4e-04
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 43  GDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTG 102
             + ++C +C    ++            N A     +C  C   F S    Q H  +   
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAA-----VCPYCSLRFFSPELKQEH-ESKCE 66

Query: 103 DKPFRCTICQKAFTTKGNLKVREIEI 128
            K   C  C + F +  ++   ++E+
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVEV 92

>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B Length = 1214

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 18  KHLCHVCHKNFSSSSALQIHMRT 40
            ++C+VC+  FS+ SAL  H+R+
Sbjct: 116 SYVCNVCNARFSTMSALSEHLRS 138

>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B Length = 1214

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 77  KHLCHVCHKNFSSSSALQIHMRT 99
            ++C+VC+  FS+ SAL  H+R+
Sbjct: 116 SYVCNVCNARFSTMSALSEHLRS 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.69
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.68
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.67
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.66
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.63
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.62
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.57
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.57
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.57
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.55
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.55
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.54
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.53
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.49
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.49
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.46
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.46
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.46
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.45
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.43
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.4
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.38
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.38
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.36
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.36
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.36
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.35
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.34
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.3
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.3
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.29
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.28
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.27
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.25
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.24
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.23
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.22
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.22
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.19
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.16
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.13
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.1
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.09
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.08
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.03
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.03
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.01
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.97
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.96
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.93
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.9
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.9
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.89
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.82
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.78
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.71
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.69
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.68
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.65
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.62
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.61
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.6
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.56
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.54
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.52
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.49
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.48
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.87
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.85
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.47
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.41
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.38
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.38
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.37
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.35
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.34
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.33
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.31
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.29
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.28
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.28
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.27
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.26
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.26
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.21
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.2
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.2
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.18
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.16
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.15
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.13
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.42
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.03
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.16
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.81
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.21
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.2
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.36
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.23
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.17
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.14
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.0
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.96
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	94.6
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.28
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.27
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.29
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	91.82
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.86
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	89.76
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	89.58
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	89.13
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.84
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	88.15
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	87.3
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.85
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	85.45
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	85.35
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.34
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	83.85
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	83.44
1yk4_A	52	Rubredoxin, RD; electron transport; 0.69A {Pyrococ	83.05
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	82.31
3cc2_Z	116	50S ribosomal protein L37AE, 50S ribosomal protein	81.04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=7.3e-33  Score=180.93  Aligned_cols=142  Identities=33%  Similarity=0.619  Sum_probs=117.1

Q ss_pred             CCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCccccc
Q psy9695           6 IPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHK   85 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~   85 (159)
                      +..++..+.++.+|.|+.|++.|.....|..|+..|.++++|.|++|+..|.....|..   ++..+.+..+|.|+.|++
T Consensus        37 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~  113 (190)
T 2i13_A           37 LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA---HQRTHTGEKPYACPECGK  113 (190)
T ss_dssp             HHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH---HHHHHHTCCCEECTTTCC
T ss_pred             HHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHH---HHHhcCCCCCCcCCCCCC
Confidence            34556677777888888888888888888888888888888888888888888888876   444567778899999999


Q ss_pred             ccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695          86 NFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus        86 ~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      .|.+...|..|++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++|++.|.+.+.|.
T Consensus       114 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~------~~~~C~~C~~~f~~~~~L~  178 (190)
T 2i13_A          114 SFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ-RTHTGE------KPYKCPECGKSFSRRDALN  178 (190)
T ss_dssp             EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCC------CCEECTTTCCEESSHHHHH
T ss_pred             ccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHH-HhcCCC------CCeECCCCCCccCCHHHHH
Confidence            9999889999999999899999999999999999999998 888888      8899999999998887764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=6e-32  Score=176.59  Aligned_cols=143  Identities=33%  Similarity=0.566  Sum_probs=110.3

Q ss_pred             cCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccc
Q psy9695           5 LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCH   84 (159)
Q Consensus         5 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~   84 (159)
                      .+..+...+.++++|.|+.|++.|.....|..|+..|.++++|.|++|+..|.....|..   ++..+.+..+|.|+.|+
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~   84 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTR---HQRTHTGEKPYKCPECG   84 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHH---HHHHHHCCCCEECTTTC
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHH---HHHhcCCCCCccCcccC
Confidence            445566778899999999999999999999999999999999999999999999999987   45557788899999999


Q ss_pred             cccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695          85 KNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus        85 ~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      +.|.+...|..|++.|.++++|.|++|++.|.....|..|+ ++|.++      ++|.|++|++.|.+.+.|.
T Consensus        85 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~------~~~~C~~C~~~f~~~~~L~  150 (190)
T 2i13_A           85 KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGE------KPYKCPECGKSFSREDNLH  150 (190)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH-HHHHCC------CCEECTTTCCEESCHHHHH
T ss_pred             CccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhCCC------CCeECCCCCcccCCHHHHH
Confidence            99999999999999999999999999999999999999999 999998      8999999999999988764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.5e-28  Score=154.52  Aligned_cols=133  Identities=23%  Similarity=0.440  Sum_probs=120.0

Q ss_pred             CCcccCcccccccCChHHHHHHHH---hhcCCCccccccc-----cccccCccccccccccccccCCCCCccCcc--ccc
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMR---THTGDKPFRCTIC-----QKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--CHK   85 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~---~~~~~~~~~c~~c-----~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--C~~   85 (159)
                      |.+|.|+.|++.|.+...|..|+.   +|.++++|.|.+|     +..|.....|..   ++..+.+.++|.|+.  |++
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~---H~~~h~~~~~~~C~~~~C~~   77 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVV---HMRRHTGEKPHKCTFEGCRK   77 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHH---HTHHHHCCCCCCCCSTTCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHH---HHHhcCCCCCccCCCCCCCC
Confidence            457899999999999999999998   6788899998753     488999988887   455678889999985  999


Q ss_pred             ccCChHHHHHHHHHccCCCCccCCc--ccccccccCCceeeehhhccCCCCCcccccccchh--hchhhhhccccc
Q psy9695          86 NFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV--EGKSFQAKHKTE  157 (159)
Q Consensus        86 ~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~  157 (159)
                      .|.+...|..|++.|+++++|.|++  |++.|...+.|..|+.++|.++      ++|.|++  |++.|.+.+.|.
T Consensus        78 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~------~~~~C~~~~C~~~f~~~~~L~  147 (155)
T 2gli_A           78 SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE------KPYVCKLPGCTKRYTDPSSLR  147 (155)
T ss_dssp             CCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC------CCEECCSTTTCCEESSHHHHH
T ss_pred             cccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC------CCeeCCCCCCccccCCHHHHH
Confidence            9999999999999999999999998  9999999999999997899988      8999988  999999988774

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=1e-27  Score=146.28  Aligned_cols=120  Identities=33%  Similarity=0.666  Sum_probs=109.6

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHH
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSA   92 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~   92 (159)
                      .+++.+|.|+.|++.|.....|..|+..|.++++|.|++|+..|.....|..|+.....+.+..+|.|+.|++.|.....
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            35778999999999999999999999999999999999999999999999886544335678889999999999999999


Q ss_pred             HHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          93 LQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        93 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |..|++.|++++||.|++|++.|.....|..|+...|.++
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999999999995677765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=6e-28  Score=157.58  Aligned_cols=132  Identities=26%  Similarity=0.460  Sum_probs=73.8

Q ss_pred             CCCcccC--cccccccCChHHHHHHHHhhcCCCcccc--ccccccccCccccccccccccccCCCCCccCc--ccccccC
Q psy9695          15 GMPKHLC--HVCHKNFSSSSALQIHMRTHTGDKPFRC--TICQKAFTTKGNLKLIPNAVFNVAGMPKHLCH--VCHKNFS   88 (159)
Q Consensus        15 ~~~~~~C--~~C~~~f~~~~~~~~h~~~~~~~~~~~c--~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~--~C~~~~~   88 (159)
                      ..++|.|  +.|++.|.+...|..|+..|.++++|.|  ..|+..|.....|..   ++..|.+.++|.|.  .|++.|.
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR---HSLTHTGEKNFTCDSDGCDLRFT   85 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHH---HHTTTTTCCCEECCSSSCCCEES
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHH---HHHHccCCCceeCCCCCCCCccC
Confidence            3445555  4566666666666666655555556666  556666655555554   23345555556665  5666665


Q ss_pred             ChHHHHHHH-HHc-cCCCCccC--CcccccccccCCceeeehhhccCCCCCcccccccchh--hchhhhhcccc
Q psy9695          89 SSSALQIHM-RTH-TGDKPFRC--TICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV--EGKSFQAKHKT  156 (159)
Q Consensus        89 ~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l  156 (159)
                      +...|..|+ ..| .++++|.|  +.|++.|...+.|..|+ ++|.++      ++|.|++  |+++|.+.+.|
T Consensus        86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~~~C~k~F~~~~~L  152 (190)
T 1tf6_A           86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQ------LPYECPHEGCDKRFSLPSRL  152 (190)
T ss_dssp             CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHH-GGGSSS------CSSBCCSSSCCCBCSSHHHH
T ss_pred             CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHH-HHhCCC------CCccCCCCCCCchhcCHHHH
Confidence            555666665 334 24455555  55666666666666565 555555      5566655  66655555544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=1.6e-28  Score=160.32  Aligned_cols=140  Identities=29%  Similarity=0.424  Sum_probs=125.6

Q ss_pred             CCccccccCCCCcccC--cccccccCChHHHHHHHHhhcCCCccccc--cccccccCcccccccccccccc-CCCCCccC
Q psy9695           6 IPNAVFNVAGMPKHLC--HVCHKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLKLIPNAVFNV-AGMPKHLC   80 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C--~~C~~~f~~~~~~~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~-~~~~~~~C   80 (159)
                      +..++..|.++.+|.|  +.|++.|.+...|..|+.+|.++++|.|.  .|+..|.....|..|+.  ..| .+..+|.|
T Consensus        30 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~--~~h~~~~~~~~C  107 (190)
T 1tf6_A           30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN--RFHNIKICVYVC  107 (190)
T ss_dssp             HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHH--TTSSTTTSCCEE
T ss_pred             HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHH--HhcCCCcceeeC
Confidence            4456677888999999  88999999999999999999999999999  89999999999987541  334 46778999


Q ss_pred             --cccccccCChHHHHHHHHHccCCCCccCCc--ccccccccCCceeeehhhccCCCCCcccccccchh---hchhhhhc
Q psy9695          81 --HVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV---EGKSFQAK  153 (159)
Q Consensus        81 --~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~---C~~~f~~~  153 (159)
                        ..|++.|.+...|..|+++|++++||.|++  |++.|...+.|..|+ ++|.+         |.|++   |++.|.+.
T Consensus       108 ~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~-~~H~~---------~~C~~~~~C~~~f~~~  177 (190)
T 1tf6_A          108 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---------YPCKKDDSCSFVGKTW  177 (190)
T ss_dssp             CSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH-TSSCS---------CCCCSTTTCCCCCSCH
T ss_pred             CCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH-HHhCC---------CcCCCCCcCCCccccH
Confidence              899999999999999999999999999988  999999999999999 88876         78888   99999998


Q ss_pred             cccc
Q psy9695         154 HKTE  157 (159)
Q Consensus       154 ~~l~  157 (159)
                      +.|.
T Consensus       178 ~~l~  181 (190)
T 1tf6_A          178 TLYL  181 (190)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=1.7e-27  Score=146.81  Aligned_cols=96  Identities=21%  Similarity=0.415  Sum_probs=63.8

Q ss_pred             ccCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCccc
Q psy9695           4 KLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC   83 (159)
Q Consensus         4 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C   83 (159)
                      .-..+....++|+++|+|++|++.|.....|..|+.+|.++++|.|++|+..|.....|..   ++..|+++++|.|+.|
T Consensus         8 ~h~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~---H~~~H~~~k~~~C~~C   84 (133)
T 2lt7_A            8 KHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTK---HEIHHTGERRYQCLAC   84 (133)
T ss_dssp             CCSSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHH---HHHHHHTCCCEEESSS
T ss_pred             HHHhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhh---hccccCCCccccCCCC
Confidence            3455667778899999999999999999999999988887766666666666655555544   2233445555555555


Q ss_pred             ccccCChHHHHHHHHHccC
Q psy9695          84 HKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        84 ~~~~~~~~~l~~H~~~h~~  102 (159)
                      ++.|.....|..|++.|++
T Consensus        85 ~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTC
T ss_pred             CCCcCCHHHHHHHhHHhcC
Confidence            5555555555555555443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=2e-26  Score=141.98  Aligned_cols=112  Identities=15%  Similarity=0.205  Sum_probs=101.0

Q ss_pred             HHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccc
Q psy9695          38 MRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT  117 (159)
Q Consensus        38 ~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  117 (159)
                      ..++.|+++|.|++|+..|.....|..|   +..|+++++|.|+.|++.|.+...|..|+++|++++||.|++||+.|..
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H---~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRH---FNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHH---HHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHH---HHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            3567899999999999999999999884   5568899999999999999999999999999999999999999999999


Q ss_pred             cCCceeeehhhccCCCCCcccccccchhhchhhhhc
Q psy9695         118 KGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAK  153 (159)
Q Consensus       118 ~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~  153 (159)
                      .+.|..|+ ++|+++......++|+|.+|++.|...
T Consensus        91 ~~~L~~H~-~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHI-KSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHH-HHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHh-HHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999 888777655666889999999988653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=1e-25  Score=142.56  Aligned_cols=122  Identities=27%  Similarity=0.476  Sum_probs=110.7

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHh-hcCCCc--------cccccccccccCccccccccccccccCCCCCccCcc-
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRT-HTGDKP--------FRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV-   82 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~-~~~~~~--------~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~-   82 (159)
                      ..++.+|.|..|++.|.+...|..|+.. |.++.+        |.|.+|+..|.....|..   ++..|.+.++|.|.. 
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~~   96 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN---HIRVHTGEKPFPCPFP   96 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHH---HTHHHHCCCSEECSCT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHH---HHHhcCCCCcccCCcC
Confidence            4456779999999999999999999987 766554        899999999999999987   455678889999998 


Q ss_pred             -cccccCChHHHHHHHHHccCCCCccCCc--ccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          83 -CHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        83 -C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                       |++.|.....|..|++.|+++++|.|++  |++.|.....|..|+ ++|.++      ++|.|+
T Consensus        97 ~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~------k~~~c~  154 (155)
T 2rpc_A           97 GCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM-HVHTSD------KSGPSS  154 (155)
T ss_dssp             TTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS-TTTTSC------CCSCSC
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH-HHhcCC------CCCCCC
Confidence             9999999999999999999999999997  999999999999999 899999      899986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=6.2e-26  Score=137.46  Aligned_cols=112  Identities=36%  Similarity=0.746  Sum_probs=102.4

Q ss_pred             CCCCcccCcc--cccccCChHHHHHHHHhhcCCCccccc--cccccccCccccccccccccccCCCCCccCcccccccCC
Q psy9695          14 AGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSS   89 (159)
Q Consensus        14 ~~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~   89 (159)
                      .++++|.|..  |++.|.+...|..|+..|.++++|.|.  .|+..|.....|..   ++..+.+.++|.|+.|++.|.+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKR---HQRRHTGVKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHH---HHHHHHCCCCEECTTTCCEESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHH---HHHHcCCCCCccCCccCchhCC
Confidence            4678999997  999999999999999999999999999  79999999999987   4455778889999999999999


Q ss_pred             hHHHHHHHHHccCCCCccC--CcccccccccCCceeeehhhc
Q psy9695          90 SSALQIHMRTHTGDKPFRC--TICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus        90 ~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      ...|..|++.|+++++|.|  +.|++.|...+.|..|+ ++|
T Consensus        79 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~H  119 (119)
T 2jp9_A           79 SDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH-NMH  119 (119)
T ss_dssp             HHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHH-HTC
T ss_pred             HHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHH-hcC
Confidence            9999999999999999999  88999999999999998 665

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=3.7e-25  Score=135.02  Aligned_cols=112  Identities=34%  Similarity=0.595  Sum_probs=101.2

Q ss_pred             CCcccCc--ccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcc--cccccCChH
Q psy9695          16 MPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--CHKNFSSSS   91 (159)
Q Consensus        16 ~~~~~C~--~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~   91 (159)
                      +++|.|+  .|++.|.+...|..|+.+| ++++|.|.+|+..|.....|..   ++..+.+.++|.|..  |++.|.+..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKR---HQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHH---HGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHH---HHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            5679999  8999999999999999998 8889999999999999999987   455688899999985  999999999


Q ss_pred             HHHHHHHHccCCCCccCC--cccccccccCCceeeehhhccCC
Q psy9695          92 ALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        92 ~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      .|..|++.|+++++|.|+  .|++.|...+.|..|+ ++|.++
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~H~~~  120 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI-LTHAKA  120 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHH-HHHC--
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHH-HHHccc
Confidence            999999999999999996  5999999999999999 899887

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.5e-24  Score=131.20  Aligned_cols=106  Identities=22%  Similarity=0.408  Sum_probs=96.8

Q ss_pred             cCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHH---ccCCCCccCCccccccccc
Q psy9695          42 TGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRT---HTGDKPFRCTICQKAFTTK  118 (159)
Q Consensus        42 ~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~  118 (159)
                      .++++|.|++|+..|.....|..   ++..+.+.++|.|+.|++.|.+...|..|+..   +.++++|.|++|++.|...
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKV---HNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHH---HHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHH---HHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            46789999999999999999987   45567888999999999999999999999996   5788999999999999999


Q ss_pred             CCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695         119 GNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus       119 ~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      ..|..|+ ++|.++      ++|.|++|++.|.+.+.|.
T Consensus        80 ~~l~~H~-~~h~~~------~~~~C~~C~~~f~~~~~l~  111 (124)
T 2dlq_A           80 MELRLHM-VSHTGE------MPYKCSSCSQQFMQKKDLQ  111 (124)
T ss_dssp             HHHHHHH-HHHSSS------CSEECSSSCCEESSHHHHH
T ss_pred             HHHHHHH-HHcCCC------CCccCCCccchhCCHHHHH
Confidence            9999999 999998      8999999999999988774

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=5e-24  Score=134.69  Aligned_cols=116  Identities=33%  Similarity=0.647  Sum_probs=105.3

Q ss_pred             ccCCCCcccCccc-----ccccCChHHHHHHHHhhcCCCcccccc--ccccccCccccccccccccccCCCCCccCcc--
Q psy9695          12 NVAGMPKHLCHVC-----HKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--   82 (159)
Q Consensus        12 ~~~~~~~~~C~~C-----~~~f~~~~~~~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--   82 (159)
                      .+.++++|.|+.|     ++.|.+...|..|+..|.++++|.|.+  |+..|.....|..   ++..+.+.++|.|+.  
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~~~  104 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT---HLRSHTGEKPYMCEHEG  104 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHH---HHHHTTTCCCEECCSTT
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHH---HHHHcCCCCCeeCCCCC
Confidence            6778889998753     499999999999999999999999985  9999999999987   455688899999998  


Q ss_pred             cccccCChHHHHHHH-HHccCCCCccCCc--ccccccccCCceeeehhhccC
Q psy9695          83 CHKNFSSSSALQIHM-RTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        83 C~~~~~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      |++.|.+...|..|+ +.|.++++|.|++  |++.|...+.|..|+ ++|+|
T Consensus       105 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~hhg  155 (155)
T 2gli_A          105 CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV-KTVHG  155 (155)
T ss_dssp             CCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHH-HHSCC
T ss_pred             CCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHH-HhhcC
Confidence            999999999999998 7899999999998  999999999999999 77764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=2.2e-24  Score=130.57  Aligned_cols=106  Identities=28%  Similarity=0.563  Sum_probs=97.5

Q ss_pred             cCCCcccccc--ccccccCccccccccccccccCCCCCccCc--ccccccCChHHHHHHHHHccCCCCccCCcccccccc
Q psy9695          42 TGDKPFRCTI--CQKAFTTKGNLKLIPNAVFNVAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT  117 (159)
Q Consensus        42 ~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  117 (159)
                      .++++|.|.+  |+..|.....|..|   +..+.+.++|.|+  .|++.|.+...|..|++.|.++++|.|++|++.|..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H---~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMH---SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHH---HHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHH---HHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCC
Confidence            4678999997  99999999999874   4457788899999  799999999999999999999999999999999999


Q ss_pred             cCCceeeehhhccCCCCCcccccccc--hhhchhhhhccccc
Q psy9695         118 KGNLKVREIEINIGSQLPKKAQQHIG--AVEGKSFQAKHKTE  157 (159)
Q Consensus       118 ~~~l~~H~~~~h~~~~~~~~~~~~~C--~~C~~~f~~~~~l~  157 (159)
                      ...|..|+ ++|.++      ++|.|  ++|++.|.+.+.|.
T Consensus        79 ~~~l~~H~-~~h~~~------~~~~C~~~~C~~~f~~~~~L~  113 (119)
T 2jp9_A           79 SDHLKTHT-RTHTGE------KPFSCRWPSCQKKFARSDELV  113 (119)
T ss_dssp             HHHHHHHH-HHHHTC------CCEECCSTTCCCEESSHHHHH
T ss_pred             HHHHHHHH-HHhcCC------CCeeCCCCCCccccCCHHHHH
Confidence            99999999 899998      89999  89999999988775

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=8.8e-23  Score=124.41  Aligned_cols=103  Identities=30%  Similarity=0.550  Sum_probs=92.7

Q ss_pred             CCccccc--cccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc--ccccccccC
Q psy9695          44 DKPFRCT--ICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKG  119 (159)
Q Consensus        44 ~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~  119 (159)
                      +++|.|+  .|+..|.+...|..|+   ..| +.++|.|..|++.|.+...|..|++.|.++++|.|++  |++.|....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~---~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL---HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH---GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH---HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            5689999  8999999999998854   345 7789999999999999999999999999999999986  999999999


Q ss_pred             CceeeehhhccCCCCCcccccccch--hhchhhhhccccc
Q psy9695         120 NLKVREIEINIGSQLPKKAQQHIGA--VEGKSFQAKHKTE  157 (159)
Q Consensus       120 ~l~~H~~~~h~~~~~~~~~~~~~C~--~C~~~f~~~~~l~  157 (159)
                      .|..|+ ++|.++      ++|.|+  .|++.|.+.+.|.
T Consensus        79 ~l~~H~-~~h~~~------~~~~C~~~~C~~~f~~~~~L~  111 (124)
T 1ubd_C           79 NLRTHV-RIHTGD------RPYVCPFDGCNKKFAQSTNLK  111 (124)
T ss_dssp             HHHHHH-HHHHCC------CCCCCCSTTCCCCCSSTTTTH
T ss_pred             HHHHHH-HHhCCC------CceECCCCCCCCccCCHHHHH
Confidence            999999 999998      899995  5999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=3.6e-20  Score=109.80  Aligned_cols=96  Identities=28%  Similarity=0.560  Sum_probs=69.4

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccC
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS   88 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~   88 (159)
                      .......+++|.|+.|++.|.....|..|+..|.++++|.|.+|+..|.....|..   ++..|.+.++|.|..|++.|.
T Consensus         8 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~   84 (106)
T 2ee8_A            8 GRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD---HRYIHSKEKPFKCQECGKGFC   84 (106)
T ss_dssp             CCCCCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHH---HGGGSCCCCTTSCSSSCCCCS
T ss_pred             CcCCcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHH---HHHHhCCCCCeECCCcCCccc
Confidence            34455667889999999999999999999998887777777777777766666655   334455666666666666666


Q ss_pred             ChHHHHHHHHHccCCCCcc
Q psy9695          89 SSSALQIHMRTHTGDKPFR  107 (159)
Q Consensus        89 ~~~~l~~H~~~h~~~~~~~  107 (159)
                      ....|..|++.|.++++|.
T Consensus        85 ~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           85 QSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             SHHHHHHHHHHTTSCCCCC
T ss_pred             CHHHHHHHHHHhCCCCCCc
Confidence            6666666666666666654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=9.8e-22  Score=124.15  Aligned_cols=106  Identities=25%  Similarity=0.450  Sum_probs=93.4

Q ss_pred             CCCccccccccccccCccccccccccccccCCCCC--------ccCcccccccCChHHHHHHHHHccCCCCccCCc--cc
Q psy9695          43 GDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPK--------HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQ  112 (159)
Q Consensus        43 ~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~--------~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~  112 (159)
                      .+.+|.|.+|+..|.....|..|+..  .|.+..+        |.|..|++.|.+...|..|++.|+++++|.|++  |+
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~--~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTM--EHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHT--TTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHh--hcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            45689999999999999999875422  1444433        899999999999999999999999999999998  99


Q ss_pred             ccccccCCceeeehhhccCCCCCcccccccchh--hchhhhhccccc
Q psy9695         113 KAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV--EGKSFQAKHKTE  157 (159)
Q Consensus       113 ~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~  157 (159)
                      +.|.....|..|+ ++|.++      ++|.|++  |++.|.+.+.|.
T Consensus       100 ~~f~~~~~L~~H~-~~h~~~------~~~~C~~~~C~k~f~~~~~L~  139 (155)
T 2rpc_A          100 KIFARSENLKIHK-RTHTGE------KPFKCEFEGCDRRFANSSDRK  139 (155)
T ss_dssp             CEESCHHHHHHHH-TTTCSS------CSBCCSSTTCCCCBSSHHHHH
T ss_pred             CccCCHHHHHHHH-HhhCCC------CCccCCCCCCCCccCCHHHHH
Confidence            9999999999999 899998      8999997  999999988774

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.8e-20  Score=109.13  Aligned_cols=88  Identities=35%  Similarity=0.673  Sum_probs=64.7

Q ss_pred             CCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHH
Q psy9695          14 AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSAL   93 (159)
Q Consensus        14 ~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l   93 (159)
                      .++.+|.|+.|++.|.....|..|+..|.                               +.++|.|..|++.|.....|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------------~~~~~~C~~C~~~f~~~~~l   52 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHT-------------------------------GVKPYKCKTCDYAAADSSSL   52 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCC-------------------------------CCCSEECSSSCCEESSHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcC-------------------------------CCCCEeCCCCCCccCCHHHH
Confidence            44556666666666666666666655543                               34467777777777788888


Q ss_pred             HHHHHHccCCCCccCCcccccccccCCceeeehhhccCCC
Q psy9695          94 QIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQ  133 (159)
Q Consensus        94 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  133 (159)
                      ..|++.|.++++|.|++|++.|.....|..|+ ++|.++.
T Consensus        53 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~   91 (96)
T 2dmd_A           53 NKHLRIHSDERPFKCQICPYASRNSSQLTVHL-RSHTGDS   91 (96)
T ss_dssp             HHHHHHSCCCCCEECSSSSCEESSHHHHHHHH-TTCCSCC
T ss_pred             HHHHHHhCCCCCccCCCCCCccCCHHHHHHHH-HHhcCCC
Confidence            88888888888888888888888888888888 7887763

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=8.6e-21  Score=100.59  Aligned_cols=57  Identities=25%  Similarity=0.563  Sum_probs=55.3

Q ss_pred             CCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          75 MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        75 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ++||.|.+|++.|.....|..|+++|++++||.|++||++|...+.|..|+ ++|.++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~-~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHL-KVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHG-GGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHh-CccCCC
Confidence            679999999999999999999999999999999999999999999999999 999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=4.8e-20  Score=109.51  Aligned_cols=99  Identities=18%  Similarity=0.203  Sum_probs=63.3

Q ss_pred             ccCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCccc
Q psy9695           4 KLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC   83 (159)
Q Consensus         4 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C   83 (159)
                      ++....+..+.++++|.|+.|++.|.....|..|+..|.  ++|.|.+|+..|.....|..|+   . |.++++|.|..|
T Consensus         2 ss~ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~---~-H~~~~~~~C~~C   75 (107)
T 1wjp_A            2 SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHE---S-KCEYKKLTCLEC   75 (107)
T ss_dssp             CCCCCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHH---H-HCSTGGGEEGGG
T ss_pred             CCccccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHH---H-cCCCCCccCccc
Confidence            344566778889999999999999999999999998873  4555555555555555554422   2 444455555555


Q ss_pred             ccccCChHHHHHHHH-HccCCCCccC
Q psy9695          84 HKNFSSSSALQIHMR-THTGDKPFRC  108 (159)
Q Consensus        84 ~~~~~~~~~l~~H~~-~h~~~~~~~C  108 (159)
                      ++.|.....|..|++ .|.++++|.+
T Consensus        76 ~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           76 MRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             TEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             cchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            555555555555554 4555555544

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=5.9e-19  Score=106.01  Aligned_cols=104  Identities=19%  Similarity=0.208  Sum_probs=81.4

Q ss_pred             CccCCccccccCCCCcccCcccccccCChHHHHHHHHh--hcCCCcc-ccccccccc--cCccccccccccccccCCCCC
Q psy9695           3 GKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRT--HTGDKPF-RCTICQKAF--TTKGNLKLIPNAVFNVAGMPK   77 (159)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~--~~~~~~~-~c~~c~~~~--~~~~~l~~~~~~~~~~~~~~~   77 (159)
                      +..+..++..|.++++|.|+.|++.|.....|..|+..  +.+.+++ .|.+|+..|  .....|..   ++..|.++++
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~---H~~~H~~~~~   80 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLE---MEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCC---CCCSCCCCSS
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHH---HhhccCCCcc
Confidence            34567777899999999999999999999999999998  6655554 488888888  77777766   4455777788


Q ss_pred             ccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      |.|..|++.|.....|..|++.|+.......+
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            88888888888888888888877665544433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=2.3e-20  Score=110.61  Aligned_cols=87  Identities=29%  Similarity=0.584  Sum_probs=76.9

Q ss_pred             cCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCc
Q psy9695          42 TGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL  121 (159)
Q Consensus        42 ~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  121 (159)
                      ..+++|.|.+|+..|.....|..   ++..|.+.++|.|..|++.|.....|..|++.|.++++|.|++|++.|.....|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLI---HERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHH---HHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHH---HHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHH
Confidence            35678999999999999888877   445577888899999999999999999999999999999999999999999999


Q ss_pred             eeeehhhccCC
Q psy9695         122 KVREIEINIGS  132 (159)
Q Consensus       122 ~~H~~~~h~~~  132 (159)
                      ..|+ ++|.++
T Consensus        90 ~~H~-~~H~~~   99 (106)
T 2ee8_A           90 AVHK-TLHMQT   99 (106)
T ss_dssp             HHHH-HHTTSC
T ss_pred             HHHH-HHhCCC
Confidence            9999 899887

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.9e-19  Score=104.74  Aligned_cols=58  Identities=28%  Similarity=0.586  Sum_probs=42.7

Q ss_pred             CCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccc
Q psy9695           6 IPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK   63 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~   63 (159)
                      +..++..+.++++|.|+.|++.|.....|..|+.+|.++++|.|.+|+..|.....|.
T Consensus        24 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A           24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             HHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             HHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            4456778888999999999999999999999998887655555544444444443333

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=9.1e-20  Score=109.59  Aligned_cols=83  Identities=19%  Similarity=0.208  Sum_probs=57.8

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHH--ccCCCCcc-CCcccccc--cccCCceeeehhhccCCCCCccccccc
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRT--HTGDKPFR-CTICQKAF--TTKGNLKVREIEINIGSQLPKKAQQHI  142 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~~~~~~~  142 (159)
                      ++..|.++++|.|..|++.|.....|..|++.  |.+++++. |++|++.|  .....|..|+ ++|.++      ++|.
T Consensus        10 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~------~~~~   82 (115)
T 2dmi_A           10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQ------KVLK   82 (115)
T ss_dssp             CCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCC------SSCB
T ss_pred             heeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCC------cceE
Confidence            34456667777777777777777777777776  55555543 77777777  6777777777 677766      6777


Q ss_pred             chhhchhhhhccccc
Q psy9695         143 GAVEGKSFQAKHKTE  157 (159)
Q Consensus       143 C~~C~~~f~~~~~l~  157 (159)
                      |++|++.|...+.|+
T Consensus        83 C~~C~k~f~~~~~L~   97 (115)
T 2dmi_A           83 CMYCGHSFESLQDLS   97 (115)
T ss_dssp             CSSSCCBCSSHHHHH
T ss_pred             CCCCCCccCCHHHHH
Confidence            777777777766553

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=8.1e-20  Score=106.16  Aligned_cols=88  Identities=28%  Similarity=0.614  Sum_probs=63.4

Q ss_pred             CCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHH
Q psy9695          14 AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSAL   93 (159)
Q Consensus        14 ~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l   93 (159)
                      +++++|.|+.|++.|.....|..|+.+|.++                               ++|.|+.|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------------~~~~C~~C~~~f~~~~~l   51 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGE-------------------------------KPYSCPVCGLRFKRKDRM   51 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSS-------------------------------CSEECSSSCCEESCHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCC-------------------------------CCCcCCCCCCccCCHHHH
Confidence            4566677777777777777777777666543                               356667777777777777


Q ss_pred             HHHHHHccCC--CCccCCcccccccccCCceeeehhhccCC
Q psy9695          94 QIHMRTHTGD--KPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        94 ~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..|++.|+++  ++|.|++|++.|.....|..|++..|.++
T Consensus        52 ~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           52 SYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            7888777776  77888888888888888888875567654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=3.6e-20  Score=106.58  Aligned_cols=85  Identities=39%  Similarity=0.782  Sum_probs=60.1

Q ss_pred             CCcccCc--ccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHH
Q psy9695          16 MPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSAL   93 (159)
Q Consensus        16 ~~~~~C~--~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l   93 (159)
                      +++|.|+  .|++.|.....|..|+..|.++                               .+|.|..|++.|.+...|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-------------------------------~~~~C~~C~~~f~~~~~l   50 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ-------------------------------KPFQCRICMRNFSRSDHL   50 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCC-------------------------------CCEECTTTCCEESCHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCC-------------------------------CCccCCCCCcccCCHHHH
Confidence            4567776  4777777777777777666543                               356666666777777777


Q ss_pred             HHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          94 QIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        94 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..|++.|+++++|.|++|++.|...+.|..|+ ++|.++
T Consensus        51 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~   88 (90)
T 1a1h_A           51 TTHIRTHTGEKPFACDICGRKFARSDERKRHT-KIHLRQ   88 (90)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESSHHHHHHHH-GGGGC-
T ss_pred             HHHHHHcCCCCCccCCCCCchhCCHHHHHHHH-HHhccc
Confidence            77777777777788888888888877887787 777765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=3.1e-20  Score=105.06  Aligned_cols=81  Identities=33%  Similarity=0.670  Sum_probs=54.5

Q ss_pred             cccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHH
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHM   97 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~   97 (159)
                      ||.|+.|++.|.....|..|+..|.++                               ++|.|+.|++.|.....|..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------------~~~~C~~C~~~f~~~~~l~~H~   49 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDT-------------------------------RPYPCQYCGKRFHQKSDMKKHT   49 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTC-------------------------------CCEECSSSCCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCC-------------------------------CCeeCCcCChhhCCHHHHHHHH
Confidence            356666666666666666666665443                               3456666666666666777777


Q ss_pred             HHccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          98 RTHTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      +.|+++++|.|++|++.|...+.|..|+ ++|.
T Consensus        50 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~   81 (82)
T 2kmk_A           50 FIHTGEKPHKCQVCGKAFSQSSNLITHS-RKHT   81 (82)
T ss_dssp             HHHHTCCCEECTTTSCEESSHHHHHHHH-HHHC
T ss_pred             HHhcCCCCCcCCCcchhhCChHHHHHHH-HhhC
Confidence            7777777777777777777777777777 6664

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=2.9e-19  Score=102.73  Aligned_cols=57  Identities=37%  Similarity=0.773  Sum_probs=41.8

Q ss_pred             CCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCcccc
Q psy9695           6 IPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNL   62 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l   62 (159)
                      +..++..+.++.+|.|+.|++.|.....|..|+..|.++++|.|.+|+..|.....|
T Consensus        22 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A           22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             HHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHH
Confidence            345566788889999999999999999999999988766555554444444443333

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.8e-20  Score=111.35  Aligned_cols=95  Identities=14%  Similarity=0.266  Sum_probs=82.5

Q ss_pred             HHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccc
Q psy9695          38 MRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT  117 (159)
Q Consensus        38 ~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  117 (159)
                      +..|.++++|.|.+|+..|.....|..|+..   |  .++|.|..|++.|.....|..|+. |+++++|.|++|++.|..
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERL---C--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH---H--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHH---C--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            4567888999999999999999999875533   3  258999999999999999999996 999999999999999999


Q ss_pred             cCCceeeehhhccCCCCCcccccccch
Q psy9695         118 KGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus       118 ~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      ...|..|++..|.++      ++|.+.
T Consensus        82 ~~~L~~H~~~~H~~~------~~~~~~  102 (107)
T 1wjp_A           82 SFSIWRHQVEVHNQN------NMAPTS  102 (107)
T ss_dssp             HHHHHHHHHHTSCCC------CCCCCC
T ss_pred             HHHHHHHHHHHcCCC------CCCCCC
Confidence            999999994489888      777764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=5.8e-20  Score=109.61  Aligned_cols=87  Identities=32%  Similarity=0.557  Sum_probs=68.4

Q ss_pred             hhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccC
Q psy9695          40 THTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKG  119 (159)
Q Consensus        40 ~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  119 (159)
                      .|.++++|.| .|+..|.....|..   ++..|.+.++|.|..|++.|.....|..|++.|+++++|.|++|++.|....
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDR---HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD   79 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHH---HHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHH---HHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHH
Confidence            3567788888 78888888887776   3445677778888888888888888888888888888888888888888888


Q ss_pred             CceeeehhhccC
Q psy9695         120 NLKVREIEINIG  131 (159)
Q Consensus       120 ~l~~H~~~~h~~  131 (159)
                      .|..|+ +.|..
T Consensus        80 ~l~~H~-~~~~~   90 (110)
T 2csh_A           80 SFHRHV-TSCTK   90 (110)
T ss_dssp             HHHHHH-HHHHH
T ss_pred             HHHHHH-HHccc
Confidence            888888 66553

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=9.8e-19  Score=98.78  Aligned_cols=58  Identities=31%  Similarity=0.639  Sum_probs=43.2

Q ss_pred             CCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccc
Q psy9695           6 IPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK   63 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~   63 (159)
                      +..++..+.++.+|.|+.|++.|.....|..|+..|.++++|.|++|+..|.....|.
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   74 (82)
T 2kmk_A           17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLI   74 (82)
T ss_dssp             HHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHH
T ss_pred             HHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHH
Confidence            3455667788899999999999999999999999887766555555555554444443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=4.1e-18  Score=98.88  Aligned_cols=68  Identities=26%  Similarity=0.555  Sum_probs=50.7

Q ss_pred             CCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCccccc
Q psy9695           6 IPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHK   85 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~   85 (159)
                      +..++..|.++.+|.|+.|++.|.....|..|+..|.++.                             .++|.|..|++
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-----------------------------~~~~~C~~C~~   73 (95)
T 2yt9_A           23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV-----------------------------GKPYICQSCGK   73 (95)
T ss_dssp             HHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC-----------------------------CSSBCCSSSCC
T ss_pred             HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC-----------------------------CCceECCCccc
Confidence            4456677888999999999999999999999999887651                             12466666666


Q ss_pred             ccCChHHHHHHHH-HccC
Q psy9695          86 NFSSSSALQIHMR-THTG  102 (159)
Q Consensus        86 ~~~~~~~l~~H~~-~h~~  102 (159)
                      .|.....|..|++ .|.+
T Consensus        74 ~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           74 GFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             CBSSHHHHHHHHHHTSCC
T ss_pred             hhCCHHHHHHHHHHhcCC
Confidence            6666666666664 4544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=5e-19  Score=99.38  Aligned_cols=71  Identities=28%  Similarity=0.499  Sum_probs=64.1

Q ss_pred             CCCCCccCcc--cccccCChHHHHHHHH-HccCCCCccCCc--ccccccccCCceeeehhhccCCCCCcccccccchhhc
Q psy9695          73 AGMPKHLCHV--CHKNFSSSSALQIHMR-THTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEG  147 (159)
Q Consensus        73 ~~~~~~~C~~--C~~~~~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~  147 (159)
                      ++.++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+ ++|.++      ++|.|++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C~   75 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHSDT------RDYICEFSG   75 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHHTS------CCCSCCSSS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhCCC------CCeeCCCCC
Confidence            4566788887  9999999999999999 699999999998  999999999999999 899988      899999999


Q ss_pred             hhh
Q psy9695         148 KSF  150 (159)
Q Consensus       148 ~~f  150 (159)
                      ++|
T Consensus        76 k~F   78 (79)
T 2dlk_A           76 PSS   78 (79)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            988

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=5.4e-18  Score=101.01  Aligned_cols=88  Identities=27%  Similarity=0.494  Sum_probs=81.2

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCCh
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSS   90 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~   90 (159)
                      ..|.++++|.| .|++.|.....|..|+..|.++++|.|.+|+..|.....|..   ++..|.+.++|.|+.|++.|...
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVG---HMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHH---HHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHH---HHHHcCCCCCeeCCCCcchhcCH
Confidence            46788999999 999999999999999999999999999999999999999987   45568888999999999999999


Q ss_pred             HHHHHHHHHccC
Q psy9695          91 SALQIHMRTHTG  102 (159)
Q Consensus        91 ~~l~~H~~~h~~  102 (159)
                      ..|..|++.|..
T Consensus        79 ~~l~~H~~~~~~   90 (110)
T 2csh_A           79 DSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHccc
Confidence            999999998764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.72  E-value=1.5e-19  Score=103.69  Aligned_cols=74  Identities=31%  Similarity=0.574  Sum_probs=63.1

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccc
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHK  155 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~  155 (159)
                      ++|.|..|++.|.....|..|++.|++++||.|++|++.|...+.|..|+ +.|++       .+|.|+.|++.|.+...
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~-------~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQHI-------LPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH-HHHTH-------HHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHH-HHhCC-------CcchHHHHHHHHHHHhh
Confidence            57889999999988888999998888888999999999999999999898 66663       57889999999988877


Q ss_pred             cc
Q psy9695         156 TE  157 (159)
Q Consensus       156 l~  157 (159)
                      |+
T Consensus        74 L~   75 (88)
T 1llm_C           74 LE   75 (88)
T ss_dssp             HH
T ss_pred             hH
Confidence            64

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=4.2e-18  Score=97.65  Aligned_cols=55  Identities=33%  Similarity=0.685  Sum_probs=42.0

Q ss_pred             CCCCccCc--ccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhc
Q psy9695          74 GMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus        74 ~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +..+|.|+  .|++.|.....|..|++.|+++++|.|++|++.|...+.|..|+ ++|
T Consensus        32 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H   88 (89)
T 2wbs_A           32 GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM-KRH   88 (89)
T ss_dssp             SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHG-GGG
T ss_pred             CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHH-Hhh
Confidence            33456665  47777777788888888888888888888888888888888887 665

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=9.5e-18  Score=93.70  Aligned_cols=66  Identities=38%  Similarity=0.669  Sum_probs=62.1

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      .+.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|+ ++|.++      ++|+|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~------~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGS------GPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCC------CCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCC------CCCCC
Confidence            3567789999999999999999999999999999999999999999999999999 999998      88987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=8.7e-18  Score=98.36  Aligned_cols=69  Identities=12%  Similarity=0.155  Sum_probs=62.8

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHH-Hc---cCCCCccCCcccccccccCCceee-ehhhccCCCCCcccccccchhh
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMR-TH---TGDKPFRCTICQKAFTTKGNLKVR-EIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      ..|+++|.|..|++.|.....|..|++ .|   .+++||.|++||++|...+.|..| + ++|.++      ++|.|.++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~-r~Htge------kpy~C~~~   85 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNL-KYHPGE------ENFKLTMV   85 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHH-HTSTTC------CCEEEEEC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhcCCC------CCeeCCcc
Confidence            567889999999999999999999997 58   568999999999999999999999 6 999999      89999985


Q ss_pred             c
Q psy9695         147 G  147 (159)
Q Consensus       147 ~  147 (159)
                      .
T Consensus        86 ~   86 (102)
T 2ghf_A           86 K   86 (102)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.2e-17  Score=95.05  Aligned_cols=76  Identities=22%  Similarity=0.407  Sum_probs=64.6

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCC----CCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD----KPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      ++..|.++++|.|..|++.|.....|..|++.++.+    ++|.|++|++.|.....|..|+ ++|.++      .++.|
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~------~~~~~   78 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGP------DGVEG   78 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-HHCCCC------CSCCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-HHccCC------CCccc
Confidence            455678888899999999999999999998877665    7899999999999999999999 888888      78899


Q ss_pred             hhhchhh
Q psy9695         144 AVEGKSF  150 (159)
Q Consensus       144 ~~C~~~f  150 (159)
                      ..|+.+|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            8888754

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=7.8e-18  Score=98.55  Aligned_cols=87  Identities=38%  Similarity=0.792  Sum_probs=55.8

Q ss_pred             CCCCcccCcc--cccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChH
Q psy9695          14 AGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSS   91 (159)
Q Consensus        14 ~~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~   91 (159)
                      ...++|.|..  |++.|.....|..|+..|.++++|.|..                             ..|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-----------------------------~~C~~~f~~~~   61 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW-----------------------------EGCDWRFARSD   61 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCS-----------------------------SSCCCEESSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCC-----------------------------CCCCCccCCHH
Confidence            3455677775  7777777777777777776554444421                             13555566666


Q ss_pred             HHHHHHHHccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          92 ALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        92 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      .|..|++.|+++++|.|++|++.|.....|..|+ ++|.
T Consensus        62 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~   99 (100)
T 2ebt_A           62 ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM-KRHQ   99 (100)
T ss_dssp             HHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHH-HHHC
T ss_pred             HHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHH-HHhC
Confidence            6666666666666666666666666666666666 5554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=1.9e-17  Score=93.79  Aligned_cols=62  Identities=26%  Similarity=0.442  Sum_probs=57.6

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      .+.+.++|.|+.|++.|.....|..|+++|++++||.|++|+++|.....|..|+.++|.++
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            35567789999999999999999999999999999999999999999999999987889876

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.66  E-value=2.5e-16  Score=92.07  Aligned_cols=58  Identities=31%  Similarity=0.657  Sum_probs=42.9

Q ss_pred             CCccccccCCCCcccCc--ccccccCChHHHHHHHHhhcCCCccccccccccccCccccc
Q psy9695           6 IPNAVFNVAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK   63 (159)
Q Consensus         6 ~~~~~~~~~~~~~~~C~--~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~   63 (159)
                      +..++..|.++++|.|+  .|++.|.....|..|+.+|.++++|.|.+|+..|.....|.
T Consensus        33 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             HHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             HHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            34556778889999996  69999999999999999887765555555555554444443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=7.8e-17  Score=89.25  Aligned_cols=60  Identities=33%  Similarity=0.663  Sum_probs=57.0

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..+.++|.|..|++.|.....|..|++.|.++++|.|++|++.|...+.|..|+ ++|.++
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~   71 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT-RIHSGE   71 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHH-HHHCCS
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHH-HhcCCC
Confidence            567789999999999999999999999999999999999999999999999999 999988

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=1.2e-16  Score=91.45  Aligned_cols=84  Identities=35%  Similarity=0.687  Sum_probs=75.8

Q ss_pred             CCCcccCcc--cccccCChHHHHHHHHhhcCCCccccc--cccccccCccccccccccccccCCCCCccCcccccccCCh
Q psy9695          15 GMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCT--ICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSS   90 (159)
Q Consensus        15 ~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~   90 (159)
                      ...+|.|+.  |++.|.....|..|+..|.++++|.|+  .|+..|.....|..   ++..|.++++|.|+.|++.|...
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTR---HYRKHTGHRPFQCQKCDRAFSRS   78 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHH---HHHHHHCCCCEECSSSSCEESSH
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHH---HHHHcCCCCCccCCCCCcccCCH
Confidence            356799999  999999999999999999999999997  59999999999987   45568888999999999999999


Q ss_pred             HHHHHHHHHcc
Q psy9695          91 SALQIHMRTHT  101 (159)
Q Consensus        91 ~~l~~H~~~h~  101 (159)
                      ..|..|++.|.
T Consensus        79 ~~l~~H~~~H~   89 (89)
T 2wbs_A           79 DHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHGGGGC
T ss_pred             HHHHHHHHhhC
Confidence            99999998873

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.5e-16  Score=89.13  Aligned_cols=72  Identities=24%  Similarity=0.483  Sum_probs=53.4

Q ss_pred             CCCCcccCcc--cccccCChHHHHHHHH-hhcCCCccccccccccccCccccccccccccccCCCCCccCcc--cccccC
Q psy9695          14 AGMPKHLCHV--CHKNFSSSSALQIHMR-THTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--CHKNFS   88 (159)
Q Consensus        14 ~~~~~~~C~~--C~~~f~~~~~~~~h~~-~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--C~~~~~   88 (159)
                      +++++|.|..  |++.|.....|..|+. .|.                               +.++|.|+.  |++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-------------------------------~~~~~~C~~~~C~k~f~   51 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-------------------------------HQKSFSCPEPACGKSFN   51 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-------------------------------SCCCEECSCTTTCCEES
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-------------------------------CCCCeECCCCCCcCccC
Confidence            3455566654  6666666666666665 343                               344677777  888888


Q ss_pred             ChHHHHHHHHHccCCCCccCCccccccc
Q psy9695          89 SSSALQIHMRTHTGDKPFRCTICQKAFT  116 (159)
Q Consensus        89 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~  116 (159)
                      ....|..|+++|++++||.|++|++.|.
T Consensus        52 ~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           52 FKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            8899999999999999999999999884

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.63  E-value=3.8e-18  Score=104.47  Aligned_cols=114  Identities=19%  Similarity=0.237  Sum_probs=85.3

Q ss_pred             ccccCCCCcccCcccccccCChHHHHHHHHh---hcCCCccccccccccccCc------cccccccccccccCCCCCccC
Q psy9695          10 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRT---HTGDKPFRCTICQKAFTTK------GNLKLIPNAVFNVAGMPKHLC   80 (159)
Q Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~---~~~~~~~~c~~c~~~~~~~------~~l~~~~~~~~~~~~~~~~~C   80 (159)
                      ...+++.++|.|...+.+...  .+..+...   ...++.+.|.+|+..|...      ..|.    .+..+.+.++|.|
T Consensus         4 ~~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~----~h~~h~~~~~~~C   77 (129)
T 2wbt_A            4 SDVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY----RLLASKAISQFVC   77 (129)
T ss_dssp             -CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHH----HHHHHHHHCSEEC
T ss_pred             chhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHH----HHHHhCCCCCeEC
Confidence            345678889988876654322  22333222   2234567888888777622      2232    2234777889999


Q ss_pred             cccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          81 HVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        81 ~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..|++.|.....|..|+++|  ++||.|++|++.|...+.|..|+ +.|++.
T Consensus        78 ~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~-~~h~~~  126 (129)
T 2wbt_A           78 PLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHV-CKKHNI  126 (129)
T ss_dssp             TTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHH-HHTTCC
T ss_pred             CCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHH-HHHCCc
Confidence            99999999999999999998  89999999999999999999999 888876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.63  E-value=2.5e-18  Score=98.52  Aligned_cols=81  Identities=25%  Similarity=0.484  Sum_probs=56.0

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHH
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH   96 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H   96 (159)
                      ++|.|+.|++.|.....|..|+.+|.++                               ++|.|+.|++.|.....|..|
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~-------------------------------~~~~C~~C~k~f~~~~~L~~H   50 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGE-------------------------------KPFACDICGRKFARSDERKRH   50 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCC-------------------------------CCEECTTTCCEESSHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCC-------------------------------CCccCCCCCCccCCHHHHHHH
Confidence            4666777777777666666666666544                               356666666666677777777


Q ss_pred             HHHccCCCCccCCcccccccccCCceeeehhhc
Q psy9695          97 MRTHTGDKPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      ++.|++ .+|.|+.|++.|.....|..|+++.|
T Consensus        51 ~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           51 RDIQHI-LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            777663 66778888888888888877775444

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.62  E-value=1.9e-16  Score=83.73  Aligned_cols=49  Identities=29%  Similarity=0.640  Sum_probs=34.3

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCcccccc
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL   64 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~   64 (159)
                      |+||.|++|+++|.....|..|+++|++++||.|++||+.|...+.|..
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~   50 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNR   50 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHH
Confidence            5677777777777777777777777777766666666666655555554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.7e-16  Score=87.46  Aligned_cols=62  Identities=37%  Similarity=0.588  Sum_probs=58.3

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..|.++++|.|..|++.|.....|..|++.|.+++||.|++|++.|.....|..|+ ++|.++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ-RIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHH-HHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHH-HhcCCC
Confidence            34778899999999999999999999999999999999999999999999999999 889876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.4e-16  Score=83.68  Aligned_cols=56  Identities=39%  Similarity=0.724  Sum_probs=49.7

Q ss_pred             CCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          74 GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        74 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      |+++|.|+.|++.|.+...|..|++.|++++||.|++|++.|...+.|..|+ +.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHL-ERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHH-HHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHH-HHhc
Confidence            3568999999999999999999999999999999999999999999999999 7665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=2.7e-16  Score=86.10  Aligned_cols=60  Identities=30%  Similarity=0.487  Sum_probs=56.5

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|+ ++|.++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHH-HHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH-HHHhCC
Confidence            567789999999999999999999999999999999999999999999999999 888877

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.7e-16  Score=90.28  Aligned_cols=84  Identities=15%  Similarity=0.256  Sum_probs=66.1

Q ss_pred             cCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccc
Q psy9695           5 LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCH   84 (159)
Q Consensus         5 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~   84 (159)
                      ++..++..|.++++|.|..|++.|.....|..|+..++...                           ...++|.|..|+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~---------------------------~~~~~~~C~~C~   54 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN---------------------------FVPAAFVCSKCG   54 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS---------------------------CCCCCEECSSSC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc---------------------------CCCcceECCCCC
Confidence            44566777778888888888888888888888876654321                           012468999999


Q ss_pred             cccCChHHHHHHHHHccCCCCccCCcccccc
Q psy9695          85 KNFSSSSALQIHMRTHTGDKPFRCTICQKAF  115 (159)
Q Consensus        85 ~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (159)
                      +.|.....|..|++.|++++++.|..|+.+|
T Consensus        55 ~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           55 KTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            9999999999999999999999999999765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.8e-16  Score=92.06  Aligned_cols=60  Identities=17%  Similarity=0.300  Sum_probs=50.8

Q ss_pred             ccCCCCCccCccccccc-CChHHHHHHHHHccCCCCccCCcccccccccCCceee-ehhhccCC
Q psy9695          71 NVAGMPKHLCHVCHKNF-SSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVR-EIEINIGS  132 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~  132 (159)
                      .+.+.++|.|+.|++.| .....|..|++.| ++++|.|++|++.|...+.|..| + ++|.++
T Consensus        28 ~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~-~~H~~~   89 (96)
T 2ctd_A           28 EIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVM-ANHNSL   89 (96)
T ss_dssp             HHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHH-HHTCCC
T ss_pred             HhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhH-HhcCCC
Confidence            34556678888888888 8888899999988 88999999999999999999999 6 888765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=1.4e-16  Score=87.81  Aligned_cols=65  Identities=20%  Similarity=0.200  Sum_probs=55.2

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      ++..|.+.++|.|..|++.|.....|..       +++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         9 H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~------~~~~C~~C   73 (73)
T 2ctu_A            9 RQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDE-GNESGK------KTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCS-SCCCCC------CCSSCCCC
T ss_pred             HHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHH-HhhcCC------CCCCCCCC
Confidence            4455777788888888888877766654       78999999999999999999999 899988      89999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.57  E-value=8.3e-16  Score=80.68  Aligned_cols=55  Identities=38%  Similarity=0.685  Sum_probs=52.4

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ||.|..|++.|.....|..|++.|+++++|.|++|++.|...+.|..|+ ++|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM-KSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHH-HSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHH-HHhccc
Confidence            5899999999999999999999999999999999999999999999999 888876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=8e-16  Score=81.63  Aligned_cols=57  Identities=33%  Similarity=0.756  Sum_probs=53.2

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ++|.|..|++.|.....|..|++.|+++++|.|++|++.|...+.|..|+.++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            379999999999999999999999999999999999999999999999976788765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=2.1e-16  Score=92.23  Aligned_cols=64  Identities=17%  Similarity=0.341  Sum_probs=56.5

Q ss_pred             cccccCCCCCccCcccccccC-ChHHHHHHHHHccC-CCCccCCcccccccccCCceeeehhhccCC
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFS-SSSALQIHMRTHTG-DKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ++..|.+.++|.|..|++.|. ....|..|++.|++ +++|.|++|++.|.....|..|+ ++|+++
T Consensus        15 h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~-~~h~~~   80 (98)
T 2gqj_A           15 WQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT-MAEHSA   80 (98)
T ss_dssp             HHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH-HHHSCS
T ss_pred             HHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH-HHHcCC
Confidence            455677888899999999999 89999999999988 88999999999999999999999 888876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=1.9e-15  Score=85.63  Aligned_cols=46  Identities=33%  Similarity=0.716  Sum_probs=29.6

Q ss_pred             cccC--cccccccCChHHHHHHHHhhcCCCcccccc--ccccccCccccc
Q psy9695          18 KHLC--HVCHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLK   63 (159)
Q Consensus        18 ~~~C--~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~   63 (159)
                      ||.|  +.|++.|.....|..|+.+|.++++|.|++  |++.|.....|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   50 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK   50 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4677  778888888888887777776665555554  554444444443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=3e-16  Score=88.94  Aligned_cols=73  Identities=29%  Similarity=0.470  Sum_probs=39.5

Q ss_pred             ccc--ccccccccCccccccccccccccCCCCCccCcc--cccccCChHHHHHHHHHccCCCCccCCc---ccccccccC
Q psy9695          47 FRC--TICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTI---CQKAFTTKG  119 (159)
Q Consensus        47 ~~c--~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~  119 (159)
                      |.|  +.|+..|.....|..   ++..+.++++|.|+.  |++.|.....|..|++.|++   |.|+.   |++.|...+
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~---H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKV---HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHH---HHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHH
T ss_pred             ccCCCCCCCcccCCHHHHHH---HHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHH
Confidence            455  555555555555554   223344455555555  55555555555555555554   55555   555555555


Q ss_pred             Cceeee
Q psy9695         120 NLKVRE  125 (159)
Q Consensus       120 ~l~~H~  125 (159)
                      .|..|+
T Consensus        76 ~l~~H~   81 (85)
T 2j7j_A           76 LYLKHV   81 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555555

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=6.1e-16  Score=83.67  Aligned_cols=60  Identities=28%  Similarity=0.479  Sum_probs=53.9

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHH-c-cCCCCccCCcccccccccCCceeeehhhccC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRT-H-TGDKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      .|.++++|.|+.|++.|.....|..|++. | .+++||.|++|++.|...+.|..|+ +.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~-~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHH-HHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHH-HHHcC
Confidence            46778899999999999999999999998 7 5899999999999999999999999 66654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.5e-15  Score=83.72  Aligned_cols=65  Identities=25%  Similarity=0.472  Sum_probs=56.5

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHH-HccCC-CCccCCcccccccccCCceeeehhhccCC
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMR-THTGD-KPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ++..|+++++|.|..|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|+...|..+
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            5567889999999999999999999999997 67764 89999999999999999999994444444

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.5e-15  Score=84.86  Aligned_cols=61  Identities=20%  Similarity=0.418  Sum_probs=56.0

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccC---CCCccCCcccccccccCCceeeehhhccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTG---DKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |+++++|.|..|++.|.....|..|++.|.+   +++|.|++|++.|.....|..|+...|.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            5678899999999999999999999999986   899999999999999999999996677765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.4e-14  Score=80.68  Aligned_cols=69  Identities=38%  Similarity=0.548  Sum_probs=47.1

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccC
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS   88 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~   88 (159)
                      ....+.++++|.|+.|++.|.....|..|+.+|.++                               ++|.|+.|++.|.
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------------~~~~C~~C~~~f~   57 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE-------------------------------KPYKCDECGKAFI   57 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS-------------------------------CSEECSSSCCEES
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCC-------------------------------cCeeCCCCCCccC
Confidence            334455667777777777777777777777666544                               3566666666666


Q ss_pred             ChHHHHHHHHHccCCCCccC
Q psy9695          89 SSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        89 ~~~~l~~H~~~h~~~~~~~C  108 (159)
                      ....|..|+++|++++||.|
T Consensus        58 ~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           58 QRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SHHHHHHHGGGSCCCCCCCC
T ss_pred             CHHHHHHHHHHhCCCCCCCC
Confidence            67777777777777777766

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=5.8e-17  Score=89.38  Aligned_cols=68  Identities=21%  Similarity=0.383  Sum_probs=45.3

Q ss_pred             HHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          34 LQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        34 ~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      |..|+.+|.++++|.|.+|+..|.....|..          .++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC----------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc----------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3445555666666666666666666555532          4567777777777777777777777777777777766

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.5e-14  Score=84.57  Aligned_cols=77  Identities=18%  Similarity=0.276  Sum_probs=55.9

Q ss_pred             ccccccCCCCcccCcccccccCChHHHHHHHH-hhcCCCccccccccccccCccccccccccccccCCCCCccCcccccc
Q psy9695           8 NAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKN   86 (159)
Q Consensus         8 ~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~-~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~   86 (159)
                      ++....++++||.|+.|++.|.....|..|++ +|.+.                            .++++|.|..|++.
T Consensus         8 ~~~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------------------------~~ekpf~C~~Cgk~   59 (102)
T 2ghf_A            8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------------------------VLNSSYVCVECNFL   59 (102)
T ss_dssp             TTTTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------------------------CCSCCEEETTTTEE
T ss_pred             cccccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------------------------CCCCCcCCCCCCcc
Confidence            34455667778888888888888888888775 35320                            23346777778888


Q ss_pred             cCChHHHHHH-HHHccCCCCccCCccc
Q psy9695          87 FSSSSALQIH-MRTHTGDKPFRCTICQ  112 (159)
Q Consensus        87 ~~~~~~l~~H-~~~h~~~~~~~C~~C~  112 (159)
                      |.....|..| +++|++++||.|.++.
T Consensus        60 F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           60 TKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             ESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            8888888888 7888888888888754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.49  E-value=7e-17  Score=98.82  Aligned_cols=106  Identities=14%  Similarity=0.170  Sum_probs=75.7

Q ss_pred             hhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccC------ChHHHHHHHHHccCCCCccCCcccc
Q psy9695          40 THTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS------SSSALQIHMRTHTGDKPFRCTICQK  113 (159)
Q Consensus        40 ~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~------~~~~l~~H~~~h~~~~~~~C~~C~~  113 (159)
                      ++.+.++|.|...+......  +..+.........++.+.|+.|.+.|.      ....|..|+ .|++++||.|++||+
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s--~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVT--LEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLM   82 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECC--HHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCC
T ss_pred             hcccccccccccCCeeeeec--HHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCc
Confidence            45678888887755433211  111100111222344577888876554      566677776 688899999999999


Q ss_pred             cccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695         114 AFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus       114 ~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      .|...+.|..|+ ++|  +      ++|.|++|++.|...+.|.
T Consensus        83 ~f~~~~~l~~H~-~~H--~------~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           83 PFSSSVSLKQHI-RYT--E------HTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             EESSHHHHHHHH-HHT--C------CCCBCTTTCCBCSSHHHHH
T ss_pred             ccCCHhHHHHHH-HHC--C------CCCCCCCCCcccCCHHHHH
Confidence            999999999999 888  5      7899999999999988774

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=2e-14  Score=83.12  Aligned_cols=61  Identities=21%  Similarity=0.337  Sum_probs=57.2

Q ss_pred             CccCcccccccCChHHHHHHHHH-ccCCCC--------ccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRT-HTGDKP--------FRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      .+.|..|++.|.....|..|++. |.++++        |.|++|++.|.....|..|+ ++|.++      ++|+|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGE------KSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTC------CCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCC------CCCCCC
Confidence            47899999999999999999998 988887        99999999999999999999 999999      899996

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.7e-14  Score=79.49  Aligned_cols=59  Identities=36%  Similarity=0.710  Sum_probs=54.3

Q ss_pred             ccCCCCCccCc--ccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          71 NVAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        71 ~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      .+.+.++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|...+.|..|+ ++|.
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-TTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHH-HhcC
Confidence            46678899997  59999999999999999999999999999999999999999999 7763

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=6e-14  Score=81.37  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=66.2

Q ss_pred             ccCChHHHHHHHHhhcCCCccccccccccc-cCccccccccccccccCCCCCccCcccccccCChHHHHHH-HHHccCCC
Q psy9695          27 NFSSSSALQIHMRTHTGDKPFRCTICQKAF-TTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH-MRTHTGDK  104 (159)
Q Consensus        27 ~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~-~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H-~~~h~~~~  104 (159)
                      +|.....+..|+..+.++++|.|++|++.| .....|..   ++..| ++++|.|..|++.|.....|..| +++|+++.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~---H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKK---HMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHH---HHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHH---HHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            456777888899999999999999999999 89999987   44556 88999999999999999999999 88898654


Q ss_pred             Ccc
Q psy9695         105 PFR  107 (159)
Q Consensus       105 ~~~  107 (159)
                      .+.
T Consensus        91 ~~~   93 (96)
T 2ctd_A           91 SGP   93 (96)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=9.7e-15  Score=85.10  Aligned_cols=78  Identities=19%  Similarity=0.225  Sum_probs=58.4

Q ss_pred             cCChHHHHHHHHhhcCCCcccccccccccc-CccccccccccccccCC-CCCccCcccccccCChHHHHHHHHHccCCCC
Q psy9695          28 FSSSSALQIHMRTHTGDKPFRCTICQKAFT-TKGNLKLIPNAVFNVAG-MPKHLCHVCHKNFSSSSALQIHMRTHTGDKP  105 (159)
Q Consensus        28 f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~-~~~~l~~~~~~~~~~~~-~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~  105 (159)
                      +.....+..|+.+|.++++|.|.+|++.|. ....|..|   +..|.+ .++|.|..|++.|.....|..|++.|++++|
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H---~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKH---MEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHH---HHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHH---HHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            334444556777777777777777777777 77777663   334555 6689999999999999999999999999888


Q ss_pred             ccC
Q psy9695         106 FRC  108 (159)
Q Consensus       106 ~~C  108 (159)
                      +.-
T Consensus        83 ~~~   85 (98)
T 2gqj_A           83 SDA   85 (98)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=4.5e-14  Score=77.96  Aligned_cols=66  Identities=27%  Similarity=0.567  Sum_probs=45.1

Q ss_pred             ccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCC
Q psy9695          10 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSS   89 (159)
Q Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~   89 (159)
                      ...+.++++|.|+.|++.|.....|..|+.+|.+                               .++|.|..|++.|..
T Consensus         9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-------------------------------~~~~~C~~C~k~f~~   57 (74)
T 2lce_A            9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-------------------------------EKPYRCNICGAQFNR   57 (74)
T ss_dssp             --CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-------------------------------CCSEECTTTCCEESC
T ss_pred             ccccCCCCCeECCCCCceeCCHHHHHHHHHHcCC-------------------------------CCCEECCCCCchhCC
Confidence            3445566667777777777777777777666644                               345667777777777


Q ss_pred             hHHHHHHHHHccCCCCc
Q psy9695          90 SSALQIHMRTHTGDKPF  106 (159)
Q Consensus        90 ~~~l~~H~~~h~~~~~~  106 (159)
                      ...|..|++.|++++||
T Consensus        58 ~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           58 PANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHHHHHHCCSCCC
T ss_pred             HHHHHHHHHhcCCCCCC
Confidence            77888888888888775

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.7e-14  Score=77.14  Aligned_cols=58  Identities=19%  Similarity=0.352  Sum_probs=53.3

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC-cccccccccCCceeeehhhccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT-ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..+.++|.|..|++.|. ...|..|+++ ++++||.|+ .||++|...+.|..|+ ++|...
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~-~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHL-KDSCNT   63 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHH-HTTSSS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHH-Hhhccc
Confidence            34567899999999999 9999999999 999999999 9999999999999999 888765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=78.19  Aligned_cols=59  Identities=27%  Similarity=0.468  Sum_probs=43.4

Q ss_pred             CccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccc
Q psy9695           7 PNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLI   65 (159)
Q Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~   65 (159)
                      ...+..+..+++|.|++|++.|.....|..|+++|++++||.|.+|++.|.....|..|
T Consensus        17 ~~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   75 (85)
T 2lv2_A           17 AGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH   75 (85)
T ss_dssp             CSCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred             CCCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence            34455566677788888888888888888888888777777777777777666666553

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=1.2e-12  Score=75.48  Aligned_cols=71  Identities=25%  Similarity=0.384  Sum_probs=57.5

Q ss_pred             CCcccCcccccccCChHHHHHHHHh-hcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHHHH
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRT-HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQ   94 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~-~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~   94 (159)
                      ...+.|+.|++.|.....|..|+.. |.++++..+..|                       .+|.|..|++.|.....|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-----------------------~~~~C~~C~k~f~~~~~L~   79 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----------------------YWEECPREGKSFKAKYKLV   79 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-----------------------CCTTCSSTTCCCSSHHHHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccce-----------------------eccCCCCCCcccCCHHHHH
Confidence            3447788999999999999999887 766554333222                       2489999999999999999


Q ss_pred             HHHHHccCCCCccCC
Q psy9695          95 IHMRTHTGDKPFRCT  109 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~  109 (159)
                      .|+++|++++||.|+
T Consensus        80 ~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           80 NHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHTCCCCSSC
T ss_pred             HHHHhcCCCCCCCCC
Confidence            999999999999996

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.39  E-value=1.8e-14  Score=72.19  Aligned_cols=41  Identities=37%  Similarity=0.549  Sum_probs=23.8

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555556666666666555556666555555556655554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=3.9e-13  Score=69.59  Aligned_cols=46  Identities=24%  Similarity=0.527  Sum_probs=37.4

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHH-HccCCCCccCCcccccccc
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTICQKAFTT  117 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  117 (159)
                      +.++++|.|..|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            566778888888888888888888876 7888888888888888865

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.38  E-value=1.7e-14  Score=72.29  Aligned_cols=42  Identities=29%  Similarity=0.465  Sum_probs=25.8

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|.++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            345555666666666666666666666666666666666655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.1e-14  Score=71.91  Aligned_cols=44  Identities=23%  Similarity=0.511  Sum_probs=26.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSSC------CSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            344555566666666666666666666666 566655      55666554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-14  Score=72.17  Aligned_cols=43  Identities=30%  Similarity=0.375  Sum_probs=28.5

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3345666667777777777666667777666666666766665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.6e-13  Score=74.06  Aligned_cols=64  Identities=28%  Similarity=0.398  Sum_probs=42.1

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChH
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSS   91 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~   91 (159)
                      ++.++++|.|+.|++.|.....|..|+.+|.+                               .++|.|..|++.|....
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-------------------------------~~~~~C~~C~~~f~~~~   51 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-------------------------------DRPFKCNYCSFDTKQPS   51 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC-------------------------------SCSEECSSSSCEESSHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-------------------------------CCCEeCCCCCCccCCHH
Confidence            34556666666666666666666666665544                               34566666666777777


Q ss_pred             HHHHHHHHccCCCCc
Q psy9695          92 ALQIHMRTHTGDKPF  106 (159)
Q Consensus        92 ~l~~H~~~h~~~~~~  106 (159)
                      .|..|++.|++++|.
T Consensus        52 ~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           52 NLSKHMKKFHGDMSG   66 (70)
T ss_dssp             HHHHHHHHHHSSSCC
T ss_pred             HHHHHHHHHhCCCCC
Confidence            777777777777654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.38  E-value=1.8e-14  Score=72.19  Aligned_cols=42  Identities=36%  Similarity=0.472  Sum_probs=25.1

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345555566666666666666666666666666666666554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.7e-14  Score=72.30  Aligned_cols=41  Identities=32%  Similarity=0.530  Sum_probs=23.8

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555556666666666555556666555555556655554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.3e-14  Score=71.80  Aligned_cols=42  Identities=21%  Similarity=0.294  Sum_probs=27.3

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345566666666666666666666666666666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.2e-14  Score=71.83  Aligned_cols=41  Identities=29%  Similarity=0.405  Sum_probs=24.5

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35555566666666666666666666666666666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.37  E-value=1.9e-14  Score=72.12  Aligned_cols=42  Identities=33%  Similarity=0.480  Sum_probs=27.4

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345566666666666666666666666666666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.8e-14  Score=72.21  Aligned_cols=43  Identities=33%  Similarity=0.473  Sum_probs=30.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=3.8e-14  Score=73.47  Aligned_cols=48  Identities=19%  Similarity=0.313  Sum_probs=43.8

Q ss_pred             HccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhh
Q psy9695          99 THTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQA  152 (159)
Q Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~  152 (159)
                      .+.+++||.|++|++.|.....|..|+..+|.++      ++|+|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~------k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE------RPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCC------CCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCC------CCccCCCCCCCCCC
Confidence            4678999999999999999999999994499998      89999999999975

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.7e-14  Score=72.21  Aligned_cols=43  Identities=33%  Similarity=0.396  Sum_probs=28.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3345666666666666666666666666666666666666665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.36  E-value=1.8e-14  Score=72.22  Aligned_cols=43  Identities=33%  Similarity=0.424  Sum_probs=32.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456677777777777777777777777777777777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-14  Score=72.26  Aligned_cols=41  Identities=34%  Similarity=0.468  Sum_probs=24.4

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            35555566666666666666666666666666666666554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.36  E-value=2.7e-14  Score=71.50  Aligned_cols=42  Identities=31%  Similarity=0.427  Sum_probs=25.4

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345555666666666666666666666666666666666555

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.8e-14  Score=72.18  Aligned_cols=43  Identities=33%  Similarity=0.373  Sum_probs=29.5

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445666677777777777777777777777777777777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.2e-14  Score=71.83  Aligned_cols=43  Identities=33%  Similarity=0.386  Sum_probs=29.0

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3345666667777777777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-14  Score=72.05  Aligned_cols=43  Identities=30%  Similarity=0.391  Sum_probs=32.5

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4456677777787788777777777777777777777777766

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-14  Score=72.08  Aligned_cols=42  Identities=33%  Similarity=0.422  Sum_probs=28.3

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345666667777777777776777777666766677776665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.36  E-value=4.4e-15  Score=79.30  Aligned_cols=55  Identities=20%  Similarity=0.361  Sum_probs=42.6

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeee
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      ++..|.++++|.|+.|++.|.....|.   ++|++++||.|++||+.|....++..+.
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccccc
Confidence            445577888888888888887776665   6788888888888888888887776554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.6e-14  Score=71.64  Aligned_cols=41  Identities=34%  Similarity=0.502  Sum_probs=28.4

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35666667777777777777777777777777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.8e-14  Score=72.19  Aligned_cols=43  Identities=35%  Similarity=0.471  Sum_probs=31.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4446667777777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-14  Score=71.73  Aligned_cols=43  Identities=30%  Similarity=0.318  Sum_probs=29.6

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3446666677777777777777777777777777777777665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-14  Score=71.70  Aligned_cols=42  Identities=45%  Similarity=0.555  Sum_probs=29.0

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345666677777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-14  Score=71.70  Aligned_cols=43  Identities=28%  Similarity=0.337  Sum_probs=29.7

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3446666677777777777777777777777777777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-14  Score=72.27  Aligned_cols=43  Identities=35%  Similarity=0.434  Sum_probs=30.6

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.8e-14  Score=71.45  Aligned_cols=41  Identities=34%  Similarity=0.550  Sum_probs=22.6

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-14  Score=71.78  Aligned_cols=43  Identities=35%  Similarity=0.447  Sum_probs=29.7

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3446666677777777777777777777777777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.6e-14  Score=72.40  Aligned_cols=43  Identities=26%  Similarity=0.281  Sum_probs=30.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-14  Score=71.66  Aligned_cols=43  Identities=35%  Similarity=0.495  Sum_probs=30.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.8e-14  Score=71.43  Aligned_cols=43  Identities=33%  Similarity=0.440  Sum_probs=29.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            4 GSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3445666667777777777777777777777777777777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.3e-14  Score=71.79  Aligned_cols=43  Identities=28%  Similarity=0.388  Sum_probs=32.9

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4456677778888888888888888888888888888888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.4e-14  Score=71.69  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=31.9

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4456677777777777777777777777777777777777766

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.8e-14  Score=72.16  Aligned_cols=43  Identities=33%  Similarity=0.453  Sum_probs=31.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456667777777777777777777777777777777777766

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.2e-14  Score=71.86  Aligned_cols=43  Identities=33%  Similarity=0.499  Sum_probs=29.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             cCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445666667777777777777777777777777777777665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.9e-14  Score=72.10  Aligned_cols=43  Identities=33%  Similarity=0.422  Sum_probs=30.4

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=3.6e-13  Score=73.90  Aligned_cols=64  Identities=42%  Similarity=0.557  Sum_probs=42.2

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccC
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFS   88 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~   88 (159)
                      ....|.++++|.|+.|++.|.....|..|+.+|.++++                               |.|+.|++.|.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-------------------------------~~C~~C~~~f~   53 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-------------------------------YKCLECGKAFS   53 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC-------------------------------EECSSSCCEES
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC-------------------------------eECCCCCcccC
Confidence            34566777777777777777777777777776665544                               55555555555


Q ss_pred             ChHHHHHHHHHccCC
Q psy9695          89 SSSALQIHMRTHTGD  103 (159)
Q Consensus        89 ~~~~l~~H~~~h~~~  103 (159)
                      ....|..|++.|+++
T Consensus        54 ~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           54 QNSGLINHQRIHTSG   68 (72)
T ss_dssp             SHHHHHHHHHHHHSS
T ss_pred             CHHHHHHHHHhcCCC
Confidence            566666666666544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.6e-14  Score=71.60  Aligned_cols=43  Identities=30%  Similarity=0.492  Sum_probs=30.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.9e-14  Score=72.09  Aligned_cols=43  Identities=33%  Similarity=0.471  Sum_probs=30.8

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3446667777777777777777777777777777777777765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.4e-14  Score=71.70  Aligned_cols=43  Identities=28%  Similarity=0.350  Sum_probs=31.6

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4456667777777777777777777777777777777777766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.8e-14  Score=71.44  Aligned_cols=43  Identities=37%  Similarity=0.476  Sum_probs=29.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445666667777777777777777777777777777777665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.1e-14  Score=71.29  Aligned_cols=43  Identities=21%  Similarity=0.172  Sum_probs=30.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.4e-14  Score=71.70  Aligned_cols=43  Identities=28%  Similarity=0.363  Sum_probs=32.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456677777777777777777777777777777777777766

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.3e-14  Score=71.75  Aligned_cols=43  Identities=26%  Similarity=0.422  Sum_probs=29.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            3445666677777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.3e-14  Score=71.18  Aligned_cols=43  Identities=28%  Similarity=0.401  Sum_probs=31.9

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3446677777777777777777777777777777777777766

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.34  E-value=3.3e-13  Score=74.02  Aligned_cols=57  Identities=35%  Similarity=0.763  Sum_probs=51.8

Q ss_pred             cCCCCCccCcc--cccccCChHHHHHHHHHccCCCCccCCc--ccccccccCCceeeehhhc
Q psy9695          72 VAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus        72 ~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  129 (159)
                      ....++|.|..  |++.|.....|..|++.|++++||.|++  |++.|.....|..|+ ++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR-RTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT-TTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh-hcC
Confidence            45567899988  9999999999999999999999999975  999999999999998 665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=4.3e-14  Score=70.78  Aligned_cols=43  Identities=33%  Similarity=0.431  Sum_probs=30.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .+.|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3446666677777777777777777777777777777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-14  Score=71.48  Aligned_cols=43  Identities=37%  Similarity=0.465  Sum_probs=30.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3346666777777777777777777777777777777777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.7e-14  Score=70.89  Aligned_cols=43  Identities=30%  Similarity=0.368  Sum_probs=27.4

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHH-HccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++ .|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            334556666666666666666666666666 6666666666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-14  Score=70.60  Aligned_cols=43  Identities=30%  Similarity=0.396  Sum_probs=27.7

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3345566666666666666666666666666666666666653

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.2e-12  Score=64.33  Aligned_cols=44  Identities=23%  Similarity=0.385  Sum_probs=41.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCSS------SCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHH-HhcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.8e-12  Score=64.66  Aligned_cols=44  Identities=27%  Similarity=0.508  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHG-GGTSCC------CCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHh-hhcCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.32  E-value=2.2e-12  Score=64.35  Aligned_cols=44  Identities=25%  Similarity=0.500  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHH-HHHSSC------CCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.6e-12  Score=64.11  Aligned_cols=44  Identities=25%  Similarity=0.515  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTAE------KPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHH-HHTTCC------CSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            567889999999999999999999999999 999998      89999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2e-12  Score=64.46  Aligned_cols=44  Identities=23%  Similarity=0.471  Sum_probs=41.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSCC------CTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.1e-14  Score=70.84  Aligned_cols=43  Identities=26%  Similarity=0.315  Sum_probs=31.9

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3346667777777777777777777777777777777777766

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.8e-12  Score=64.04  Aligned_cols=44  Identities=27%  Similarity=0.524  Sum_probs=40.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEE------KPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHH-HHHTSS------CSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            456789999999999999999999999999 899998      89999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.31  E-value=2.1e-12  Score=64.43  Aligned_cols=44  Identities=27%  Similarity=0.588  Sum_probs=41.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHH-HHHSCC------SSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-12  Score=64.33  Aligned_cols=44  Identities=30%  Similarity=0.621  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGK------KPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSSC------CCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.7e-12  Score=64.00  Aligned_cols=45  Identities=27%  Similarity=0.549  Sum_probs=41.6

Q ss_pred             HHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          95 IHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      .|+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGE------RHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHH-HHHSCC------SSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            3667899999999999999999999999999 999998      89999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.1e-12  Score=64.42  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTTS------CCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.3e-12  Score=64.27  Aligned_cols=44  Identities=18%  Similarity=0.470  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-RVHMGE------KTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHG-GGGGSC------CCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            567899999999999999999999999999 899998      89999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.4e-12  Score=64.24  Aligned_cols=44  Identities=25%  Similarity=0.509  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTGY------RPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTCC------CSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHH-HHcCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.6e-12  Score=64.12  Aligned_cols=44  Identities=25%  Similarity=0.482  Sum_probs=41.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGE------KPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHH-TTTCCS------CSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHH-HHhCCC------CCCCCCCC
Confidence            567899999999999999999999999999 899998      89999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2e-12  Score=64.47  Aligned_cols=44  Identities=27%  Similarity=0.455  Sum_probs=41.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQ-VIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHH-HHHHCC------SCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.30  E-value=1.9e-12  Score=64.56  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=41.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGV------KPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSSC------CCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.7e-12  Score=64.03  Aligned_cols=44  Identities=30%  Similarity=0.486  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTTC------CCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2e-12  Score=64.46  Aligned_cols=44  Identities=27%  Similarity=0.533  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGV------KPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHH-GGGSCC------CSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.30  E-value=2.4e-12  Score=64.24  Aligned_cols=44  Identities=16%  Similarity=0.487  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQ-NVHVGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHG-GGGSSS------SCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHH-HHcCCC------CCcCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.7e-12  Score=63.99  Aligned_cols=44  Identities=27%  Similarity=0.483  Sum_probs=41.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGE------NPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHH-TTTTTS------CCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.6e-12  Score=64.09  Aligned_cols=44  Identities=27%  Similarity=0.545  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTTC------SCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.1e-12  Score=64.42  Aligned_cols=44  Identities=25%  Similarity=0.505  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCCC------CCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHH-hhcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-12  Score=64.18  Aligned_cols=44  Identities=23%  Similarity=0.480  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTGQ------RPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHH-HHHHSC------CCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            567889999999999999999999999999 999998      89999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.30  E-value=2.5e-12  Score=64.17  Aligned_cols=44  Identities=23%  Similarity=0.480  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHH-TGGGCC------CCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.1e-12  Score=63.78  Aligned_cols=45  Identities=29%  Similarity=0.465  Sum_probs=41.6

Q ss_pred             HHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          95 IHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      .|+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQ------KPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSCC------CCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            3677899999999999999999999999999 999998      89999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.9e-12  Score=63.86  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDD------KHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCSC------CCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.9e-12  Score=63.91  Aligned_cols=44  Identities=25%  Similarity=0.475  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCCC------SCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.2e-12  Score=64.34  Aligned_cols=44  Identities=20%  Similarity=0.380  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSCS------CCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.1e-12  Score=63.79  Aligned_cols=44  Identities=23%  Similarity=0.431  Sum_probs=41.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGE------KPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCS------SCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.4e-12  Score=64.23  Aligned_cols=44  Identities=25%  Similarity=0.491  Sum_probs=41.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCCC------CCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            567789999999999999999999999999 999998      89999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.7e-12  Score=64.05  Aligned_cols=44  Identities=34%  Similarity=0.665  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGE------KPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSSC------CSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-12  Score=64.34  Aligned_cols=45  Identities=16%  Similarity=0.319  Sum_probs=41.6

Q ss_pred             HHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          95 IHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      .|+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFRE------KSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHHST------TSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHH-HHHcCC------CCCCCCCC
Confidence            3667899999999999999999999999999 899998      89999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.4e-12  Score=64.22  Aligned_cols=44  Identities=32%  Similarity=0.607  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHH-HHHHCS------SCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 899998      89999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.4e-12  Score=64.20  Aligned_cols=44  Identities=23%  Similarity=0.493  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTTC------CCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.1e-14  Score=69.75  Aligned_cols=43  Identities=30%  Similarity=0.440  Sum_probs=30.4

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3446666777777777777777777777777777777777654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.7e-12  Score=64.05  Aligned_cols=44  Identities=25%  Similarity=0.493  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHW-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHH-HHHSSS------SCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHH-HHHCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.29  E-value=2.4e-12  Score=64.19  Aligned_cols=44  Identities=23%  Similarity=0.425  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGE------KPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTSC------CCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.3e-12  Score=64.33  Aligned_cols=44  Identities=34%  Similarity=0.536  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSCS------SCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.3e-12  Score=71.53  Aligned_cols=67  Identities=24%  Similarity=0.491  Sum_probs=46.7

Q ss_pred             cCCccccccCCCCcccCcccccccCChHHHHHHHH-hhcCCCccccccccccccCccccccccccccccCCCCCccCccc
Q psy9695           5 LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVC   83 (159)
Q Consensus         5 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~-~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C   83 (159)
                      ++..++..|.++++|.|+.|++.|.....|..|+. .|.++                              .++|.|+.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~------------------------------~~~~~C~~C   51 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN------------------------------VAKFHCPHC   51 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS------------------------------CSSEECSSS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC------------------------------CCccCCCCC
Confidence            44567778888888888888888888888888876 45432                              134666666


Q ss_pred             ccccCChHHHHHHHHHcc
Q psy9695          84 HKNFSSSSALQIHMRTHT  101 (159)
Q Consensus        84 ~~~~~~~~~l~~H~~~h~  101 (159)
                      ++.|.....|..|++.++
T Consensus        52 ~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A           52 DTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             SCEESSHHHHHHHHHHTS
T ss_pred             CCccCCHHHHHHHHHHhC
Confidence            666666666667766533

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.29  E-value=3.2e-12  Score=63.76  Aligned_cols=44  Identities=20%  Similarity=0.428  Sum_probs=40.9

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|.....|..|+ ++|.++      ++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTRE------KPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCCS------SCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            567789999999999999999999999999 999998      89999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=2e-12  Score=65.19  Aligned_cols=42  Identities=24%  Similarity=0.433  Sum_probs=32.0

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccc
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQK  113 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  113 (159)
                      +.++++|.|..|++.|.....|..|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            455667778888888877777888877777777888877774

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.5e-12  Score=63.59  Aligned_cols=44  Identities=14%  Similarity=0.252  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQ------KNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSCC------SCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.28  E-value=8.1e-13  Score=70.36  Aligned_cols=54  Identities=13%  Similarity=0.227  Sum_probs=46.8

Q ss_pred             HHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695          94 QIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus        94 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      ..|++.|++++||.|++||+.|...+.|.    ++|.++      ++|.|++|++.|...+.+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~------k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMT------GTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTT------TEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCC------CCEECCCCCCccccCcccc
Confidence            35677899999999999999999888775    678888      8999999999999887764

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3e-12  Score=63.82  Aligned_cols=44  Identities=18%  Similarity=0.405  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGE------KCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCCS------CSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1e-13  Score=73.28  Aligned_cols=47  Identities=17%  Similarity=0.376  Sum_probs=43.7

Q ss_pred             CCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhccccc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAKHKTE  157 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (159)
                      +||.|++|++.|...+.|..|+ ++|.++      ++|.|++|++.|.+.+.|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~------~~~~C~~C~~~f~~~~~l~   47 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNE------KPYPCGLCNRAFTRRDLLI   47 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSS------CSEECTTTCCEESSHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhCCC------CCccCCCCCCccCCHHHHH
Confidence            5899999999999999999999 899988      8999999999999888764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.2e-12  Score=64.34  Aligned_cols=44  Identities=25%  Similarity=0.528  Sum_probs=41.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHR-RVHTGG------KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHT-HHHHSC------CCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHH-HhcCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.5e-12  Score=64.16  Aligned_cols=44  Identities=25%  Similarity=0.557  Sum_probs=41.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGE------RPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCSC------CSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.5e-12  Score=63.61  Aligned_cols=44  Identities=18%  Similarity=0.492  Sum_probs=41.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQ-RVHTGE------KLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHH-HHHHCC------CCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHH-HHHcCC------CCCCCCCC
Confidence            566789999999999999999999999999 999998      89999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.9e-12  Score=63.89  Aligned_cols=44  Identities=23%  Similarity=0.477  Sum_probs=41.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQ-RTHTGE------KPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHH-HHHSSC------CCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHH-HHcCCC------CCCCCCCC
Confidence            567899999999999999999999999999 899998      89999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.27  E-value=1.4e-12  Score=68.06  Aligned_cols=50  Identities=42%  Similarity=0.831  Sum_probs=31.0

Q ss_pred             CCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCcccccc
Q psy9695          15 GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL   64 (159)
Q Consensus        15 ~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~   64 (159)
                      ++++|.|+.|++.|.....|..|+.+|.++++|.|++|+..|.....|..
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   50 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRY   50 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHH
Confidence            35677888888888888888888777776655555555555555444443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=4.1e-12  Score=63.06  Aligned_cols=41  Identities=22%  Similarity=0.375  Sum_probs=31.9

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCccc
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQ  112 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~  112 (159)
                      |+++++|.|..|++.|.....|..|+++|+++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            56677788888888887777888888888888888887775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=4.2e-13  Score=67.72  Aligned_cols=43  Identities=19%  Similarity=0.263  Sum_probs=39.9

Q ss_pred             HccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhch
Q psy9695          99 THTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGK  148 (159)
Q Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~  148 (159)
                      .+.++++|.|++|++.|.....|..|+ ++|.++      ++|.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHK-LSHSGE------KPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHG-GGSCSC------CCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HhcCCC------CCccCCCCCC
Confidence            367789999999999999999999999 999998      8999999985

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.2e-12  Score=63.77  Aligned_cols=44  Identities=25%  Similarity=0.545  Sum_probs=41.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTGE------KPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSCC------CCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            677899999999999999999999999999 999998      89999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.1e-12  Score=64.42  Aligned_cols=44  Identities=27%  Similarity=0.397  Sum_probs=40.3

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      ++..|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44567889999999999999999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=2.7e-12  Score=66.95  Aligned_cols=42  Identities=40%  Similarity=0.804  Sum_probs=24.5

Q ss_pred             cccCcccccccCChHHHHHHHHhhcCCCccccccccccccCc
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTK   59 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~   59 (159)
                      ||.|+.|++.|.....|..|+.+|.++++|.|++|+..|...
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   42 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK   42 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCH
Confidence            466777777777777777776666555444444444444333

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6.4e-12  Score=62.87  Aligned_cols=44  Identities=25%  Similarity=0.388  Sum_probs=40.9

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehh-hccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIE-INIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|++++||.|++|++.|...+.|..|+ + +|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~~H~~~------k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHW-RYYHTGE------KPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHH-TTTTTTS------CSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHh-HhhcCCC------CCCCCCCC
Confidence            567899999999999999999999999999 7 99988      89999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=1.3e-12  Score=70.26  Aligned_cols=62  Identities=23%  Similarity=0.462  Sum_probs=39.5

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHh-hcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCC
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRT-HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSS   89 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~-~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~   89 (159)
                      ..+.++++|.|+.|++.|.....|..|+.. |.                              .+.++|.|+.|++.|..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~------------------------------~~~~~~~C~~C~k~f~~   52 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK------------------------------RNVKVYPCPFCFKEFTR   52 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS------------------------------SSCCCEECTTTCCEESC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcC------------------------------CCCcCeECCCCCCccCC
Confidence            456667777777777777777777777665 41                              23345666666666666


Q ss_pred             hHHHHHHHHHccC
Q psy9695          90 SSALQIHMRTHTG  102 (159)
Q Consensus        90 ~~~l~~H~~~h~~  102 (159)
                      ...|..|++.+++
T Consensus        53 ~~~L~~H~~~~H~   65 (66)
T 2drp_A           53 KDNMTAHVKIIHK   65 (66)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcC
Confidence            6666666666543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.7e-12  Score=62.82  Aligned_cols=44  Identities=34%  Similarity=0.610  Sum_probs=40.8

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHH-TTTTTS------CCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCC------CCCCCCCC
Confidence            667899999999999999999999999999 999998      89999875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.8e-13  Score=67.73  Aligned_cols=40  Identities=38%  Similarity=0.536  Sum_probs=25.4

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ..|++.++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3455666666666666666666666666666666666665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.2e-13  Score=68.12  Aligned_cols=40  Identities=35%  Similarity=0.541  Sum_probs=26.4

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ..|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3455666666666666666666666666666666666665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-13  Score=68.27  Aligned_cols=41  Identities=39%  Similarity=0.638  Sum_probs=29.6

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            35666677777777777777777777777777777777765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.6e-13  Score=67.86  Aligned_cols=42  Identities=31%  Similarity=0.385  Sum_probs=29.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            344666677777777777777777777777777777777753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.24  E-value=2.7e-13  Score=66.42  Aligned_cols=38  Identities=29%  Similarity=0.445  Sum_probs=23.6

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      |+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45556666666666666666666666666666666653

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-13  Score=67.58  Aligned_cols=39  Identities=33%  Similarity=0.536  Sum_probs=23.0

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            345555566666666666666666666666666666554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.9e-13  Score=68.32  Aligned_cols=42  Identities=33%  Similarity=0.449  Sum_probs=29.8

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             ccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            344666777777777777777777777777777777777753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=2e-13  Score=68.26  Aligned_cols=42  Identities=38%  Similarity=0.484  Sum_probs=30.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445666777777777777777777777777777777777763

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.7e-13  Score=67.75  Aligned_cols=41  Identities=32%  Similarity=0.419  Sum_probs=28.4

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            34466666777777777777777777777777777777765

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.6e-13  Score=67.32  Aligned_cols=40  Identities=35%  Similarity=0.571  Sum_probs=26.1

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ..|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3455666666666666666666666666666666666665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-13  Score=67.53  Aligned_cols=40  Identities=35%  Similarity=0.544  Sum_probs=24.4

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ..|.+.++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            3455556666666666666666666666666666666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-13  Score=67.65  Aligned_cols=41  Identities=32%  Similarity=0.476  Sum_probs=26.6

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            33455666666666666666666666666666666666665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-13  Score=67.90  Aligned_cols=41  Identities=34%  Similarity=0.512  Sum_probs=28.8

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            34466667777777777777777777777777777777775

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-13  Score=67.68  Aligned_cols=41  Identities=29%  Similarity=0.520  Sum_probs=29.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34466667777777777777777777777777777777775

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.1e-13  Score=67.55  Aligned_cols=39  Identities=31%  Similarity=0.331  Sum_probs=21.1

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccC-CCCccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTG-DKPFRCT  109 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~-~~~~~C~  109 (159)
                      .|.++++|.|..|++.|.....|..|+++|++ ++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34455555555555555555555555555555 5555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=9.6e-12  Score=61.99  Aligned_cols=44  Identities=27%  Similarity=0.480  Sum_probs=40.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHH-HHHCCC------CSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            567899999999999999999999999999 999998      89999875

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.5e-13  Score=67.91  Aligned_cols=42  Identities=33%  Similarity=0.499  Sum_probs=30.0

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344666777777777777777777777777777777777753

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.7e-12  Score=62.83  Aligned_cols=42  Identities=33%  Similarity=0.369  Sum_probs=32.6

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      +.|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            346677778888888888888888888888888888888776

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-13  Score=67.43  Aligned_cols=42  Identities=31%  Similarity=0.453  Sum_probs=30.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|.+.++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344666777777777777777777777777777777777763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.4e-13  Score=66.00  Aligned_cols=39  Identities=23%  Similarity=0.343  Sum_probs=26.5

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      .|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            355666677777777777777777777777777776663

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.9e-12  Score=62.29  Aligned_cols=43  Identities=28%  Similarity=0.616  Sum_probs=39.7

Q ss_pred             HHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          97 MRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      ++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-RIHTGE------KPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHH-TTTSSS------CCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHH-HHhCCC------CCCCCCCC
Confidence            35688999999999999999999999999 999998      89999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5e-13  Score=65.40  Aligned_cols=35  Identities=43%  Similarity=0.844  Sum_probs=20.6

Q ss_pred             HHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          97 MRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +++|++++||.|++|++.|...+.|..|+ ++|.++
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~   37 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHI-RVHTGS   37 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTG-GGTSCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHH-HHhCCC
Confidence            34455556666666666666666666665 555555

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.7e-13  Score=67.74  Aligned_cols=42  Identities=36%  Similarity=0.440  Sum_probs=29.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|.+.++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            344666667777777777777777777777777777777753

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-13  Score=67.50  Aligned_cols=42  Identities=36%  Similarity=0.539  Sum_probs=29.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|++.++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344666677777777777777777777777777777777753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-13  Score=67.13  Aligned_cols=41  Identities=44%  Similarity=0.563  Sum_probs=28.2

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.+.++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34456666777777777777777777777777777777765

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-13  Score=67.39  Aligned_cols=40  Identities=33%  Similarity=0.494  Sum_probs=26.5

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ..|++.++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3455666666666666666666666666666666666665

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=6.9e-12  Score=69.72  Aligned_cols=66  Identities=20%  Similarity=0.412  Sum_probs=43.7

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccCcccccccCChHH
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSA   92 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~   92 (159)
                      |.++++|.|+.|++.|.....|..|+.+|.++                            .+.++|.|..|++.|.....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~----------------------------~~~~~~~C~~C~k~f~~~~~   53 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET----------------------------VAALRFPCEFCGKRFEKPDS   53 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH----------------------------TTTCCEECTTTCCEESSHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc----------------------------CCCcccCCCCCCchhCCHHH
Confidence            56778888888888888888888888777641                            01234666666666666666


Q ss_pred             HHHHH-HHccCCCCc
Q psy9695          93 LQIHM-RTHTGDKPF  106 (159)
Q Consensus        93 l~~H~-~~h~~~~~~  106 (159)
                      |..|+ ..|.++++.
T Consensus        54 L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A           54 VAAHRSKSHPALLLA   68 (78)
T ss_dssp             HHHHHHHTSTTTSSC
T ss_pred             HHHHHHHhCCCCCCC
Confidence            66666 345555444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.6e-13  Score=67.30  Aligned_cols=41  Identities=32%  Similarity=0.437  Sum_probs=28.8

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34466667777777777777777777777777777777775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-13  Score=67.02  Aligned_cols=42  Identities=38%  Similarity=0.577  Sum_probs=31.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            344667777777777777777777777777777777777763

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-13  Score=66.75  Aligned_cols=41  Identities=27%  Similarity=0.395  Sum_probs=30.9

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34466777788888888887777778887777777777776

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.5e-13  Score=66.68  Aligned_cols=40  Identities=28%  Similarity=0.349  Sum_probs=24.5

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ..|+++++|.|+.|++.|.....|..|++.|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3455556666666666666666666666666666666653

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.7e-13  Score=66.19  Aligned_cols=41  Identities=32%  Similarity=0.472  Sum_probs=29.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.+.++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            34466677777777777777777777777777777777764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-13  Score=66.15  Aligned_cols=41  Identities=39%  Similarity=0.523  Sum_probs=27.6

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            33456666677777777777777777777777777777663

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.7e-13  Score=65.63  Aligned_cols=41  Identities=24%  Similarity=0.289  Sum_probs=27.0

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            33456666677777777776666677776666666666663

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.9e-13  Score=64.93  Aligned_cols=37  Identities=30%  Similarity=0.567  Sum_probs=19.3

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      |.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4444555555555555555555555555555555544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.7e-13  Score=65.87  Aligned_cols=39  Identities=36%  Similarity=0.615  Sum_probs=24.0

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355556666666666666666666666666666666664

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5e-13  Score=66.78  Aligned_cols=41  Identities=29%  Similarity=0.447  Sum_probs=28.4

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            34456666777777777777777777777777777777765

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.8e-13  Score=67.23  Aligned_cols=41  Identities=29%  Similarity=0.372  Sum_probs=28.4

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34466666777777777777777777777777777777765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.4e-13  Score=65.49  Aligned_cols=39  Identities=18%  Similarity=0.243  Sum_probs=23.3

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      ..|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            335555566666666666666666666666666666655

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.19  E-value=4.3e-13  Score=69.42  Aligned_cols=46  Identities=15%  Similarity=0.259  Sum_probs=26.2

Q ss_pred             ccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          86 NFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        86 ~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      .|.....|..|++.|+++++|.|++|++.|...+.|..|+ ++|.++
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~   50 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHL-ELRHFA   50 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHH-HHHTTT
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHH-HHhccC
Confidence            3444444555555566666666666666666666666665 555555

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.18  E-value=2.4e-11  Score=60.48  Aligned_cols=43  Identities=28%  Similarity=0.561  Sum_probs=39.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQ-RIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHH-HHHTTS------CSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            667899999999999999999999999999 999998      8999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.8e-11  Score=60.20  Aligned_cols=43  Identities=28%  Similarity=0.533  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHR-GIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHH-TTTTTS------SCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHH-HhhCCC------CCCCCCC
Confidence            567899999999999999999999999999 999998      8999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.3e-11  Score=60.56  Aligned_cols=44  Identities=27%  Similarity=0.475  Sum_probs=40.2

Q ss_pred             HHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          95 IHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      .|+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTGE------KPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHH-HHHSSS------SCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCC------CCCCCCC
Confidence            3667899999999999999999999999999 999998      8999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-13  Score=65.11  Aligned_cols=38  Identities=26%  Similarity=0.470  Sum_probs=23.4

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      .|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            35555666666666666666666666666666666655

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.7e-11  Score=59.78  Aligned_cols=42  Identities=24%  Similarity=0.567  Sum_probs=39.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHK-RVHTGE------RSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHH-HHCSSC------CSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCC------CCCCCC
Confidence            567899999999999999999999999999 999998      899996

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.2e-11  Score=60.00  Aligned_cols=43  Identities=33%  Similarity=0.583  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGE------RPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHH-TTTSCC------CCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            667889999999999999999999999999 999998      8999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.3e-13  Score=66.14  Aligned_cols=41  Identities=34%  Similarity=0.442  Sum_probs=27.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.+.++|.|+.|++.|.....|..|++.|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33456666677777777776666777777667666666665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=8.9e-13  Score=64.47  Aligned_cols=39  Identities=26%  Similarity=0.456  Sum_probs=27.5

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      ..+.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            345666677777777777777777777777777777765

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.2e-11  Score=60.01  Aligned_cols=43  Identities=28%  Similarity=0.543  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHH-TTTSCS------CCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHh-HhcCCC------CCCCCCC
Confidence            567889999999999999999999999999 999998      8999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-13  Score=66.83  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=31.1

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44566777788888888887777788887777777777776

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.9e-13  Score=65.02  Aligned_cols=35  Identities=29%  Similarity=0.443  Sum_probs=18.0

Q ss_pred             HHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          97 MRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +++|++++||.|++|++.|...+.|..|+ ++|.++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~   38 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQ-KIHTRK   38 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTH-HHHCCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHH-HHhCCC
Confidence            33445555555555555555555555555 455544

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.5e-11  Score=58.20  Aligned_cols=42  Identities=17%  Similarity=0.460  Sum_probs=38.2

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQ-KMHTVK------SGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHH-HHTSCC------SSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHH-HHhCCC------CCCCCC
Confidence            456789999999999999999999999999 899998      899984

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.16  E-value=3.2e-11  Score=58.75  Aligned_cols=42  Identities=24%  Similarity=0.521  Sum_probs=38.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQ-RTHAGE------SGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHH-GGGCCC------CSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHH-HhcCCC------CCCCCC
Confidence            456789999999999999999999999999 999998      899985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-11  Score=59.52  Aligned_cols=43  Identities=30%  Similarity=0.586  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGE------NPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHH-GGGSSS------CCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            667899999999999999999999999999 899998      8999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.9e-11  Score=60.18  Aligned_cols=43  Identities=26%  Similarity=0.510  Sum_probs=39.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHH-TTTSCC------CCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            667899999999999999999999999999 899998      8999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.5e-11  Score=59.85  Aligned_cols=44  Identities=30%  Similarity=0.579  Sum_probs=40.1

Q ss_pred             HHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          95 IHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      .|++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~------~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHH-HHHCCC------CCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            3667899999999999999999999999999 999998      8999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.4e-11  Score=59.91  Aligned_cols=43  Identities=26%  Similarity=0.527  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHG-GGGCCC------CCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCC------CCCCCCC
Confidence            567899999999999999999999999999 999998      8999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.3e-11  Score=59.92  Aligned_cols=43  Identities=26%  Similarity=0.567  Sum_probs=39.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGE------KPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHH-HHHCCC------SCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHH-HHcCCC------CCCCCCC
Confidence            567899999999999999999999999999 899998      8999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.9e-11  Score=59.69  Aligned_cols=43  Identities=28%  Similarity=0.529  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHH-HHHTSS------CCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHcCCC------CCCCCCC
Confidence            567899999999999999999999999999 999998      8999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.6e-11  Score=59.85  Aligned_cols=43  Identities=26%  Similarity=0.558  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTGE------KPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHG-GGGTTC------CCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHH-HhcCCC------CCCCCCC
Confidence            567889999999999999999999999999 999998      8999974

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.3e-11  Score=66.67  Aligned_cols=58  Identities=36%  Similarity=0.712  Sum_probs=42.4

Q ss_pred             CccccccCCCCcccCc--ccccccCChHHHHHHHHhhcCCCccccccccccccCcccccc
Q psy9695           7 PNAVFNVAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL   64 (159)
Q Consensus         7 ~~~~~~~~~~~~~~C~--~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~   64 (159)
                      ......+.++++|.|+  .|++.|.....|..|+.+|.++++|.|++|++.|.....|..
T Consensus         8 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   67 (73)
T 1f2i_G            8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT   67 (73)
T ss_dssp             CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             chhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHH
Confidence            4455667778888886  588888888888888888877766666666666666555544

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.9e-11  Score=59.69  Aligned_cols=43  Identities=19%  Similarity=0.505  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGE------KPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHH-TTTSSS------CCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCC------CCCCCCC
Confidence            567889999999999999999999999999 999998      8999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.3e-11  Score=59.93  Aligned_cols=43  Identities=40%  Similarity=0.648  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHH-HTSCSS------SSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            567889999999999999999999999999 999998      8999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=3.3e-11  Score=59.69  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=40.4

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHhhcCCCcccccccc
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQ   53 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~   53 (159)
                      ..|.++++|.|+.|++.|.....|..|+.+|.++++|.|++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4678899999999999999999999999999999999999986

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.1e-13  Score=66.20  Aligned_cols=41  Identities=29%  Similarity=0.389  Sum_probs=27.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33456666677777777776666777777667666676664

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.3e-11  Score=59.94  Aligned_cols=43  Identities=28%  Similarity=0.539  Sum_probs=39.9

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-RIHTGE------KPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHH-HHHHSC------CCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHH-HhcCCC------CCCCCCC
Confidence            667899999999999999999999999999 999998      8999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.2e-11  Score=60.02  Aligned_cols=43  Identities=26%  Similarity=0.560  Sum_probs=39.4

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |++.|++++||.|++|++.|.....|..|+ ++|.++      ++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGE------RPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTSC------CSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCCC------CCCCCCC
Confidence            567789999999999999999999999999 899998      8999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.3e-11  Score=59.53  Aligned_cols=43  Identities=30%  Similarity=0.583  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-VIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHH-TTTCCS------CCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            667899999999999999999999999999 899998      8999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.5e-11  Score=59.46  Aligned_cols=43  Identities=26%  Similarity=0.505  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ-RIHRGE------KPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH-GGGCSC------CCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH-hHhCCC------CCCCCCC
Confidence            667899999999999999999999999999 999998      8999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.3e-12  Score=64.54  Aligned_cols=41  Identities=27%  Similarity=0.271  Sum_probs=30.8

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      +..|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            34466777788888888888878888888888878887774

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.5e-11  Score=59.84  Aligned_cols=43  Identities=28%  Similarity=0.524  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHR-RIHTGE------KPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHG-GGTSSC------CSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHH-HhcCCC------CCcCCCC
Confidence            567899999999999999999999999999 999998      8999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.5e-11  Score=58.50  Aligned_cols=42  Identities=38%  Similarity=0.663  Sum_probs=38.8

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGE------SGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHH-HHTTTS------SCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHH-HHhCCC------CCCCCC
Confidence            567899999999999999999999999999 999998      899985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=6.2e-11  Score=58.10  Aligned_cols=39  Identities=23%  Similarity=0.359  Sum_probs=30.1

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      |+++++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            566677888888888888888888888888888887763

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.2e-11  Score=58.60  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=38.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTGE------SGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHH-TTTCCS------SSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHh-hhcCCC------CCCCCC
Confidence            567899999999999999999999999999 999998      899985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.8e-11  Score=59.32  Aligned_cols=43  Identities=35%  Similarity=0.615  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTGE------KPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHH-TTTSSC------CSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCC------CCCCCCC
Confidence            567899999999999999999999999999 999998      8999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=6.6e-11  Score=58.24  Aligned_cols=42  Identities=21%  Similarity=0.501  Sum_probs=38.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHE-RTHARK------SGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHH-HHCCCC------CSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHh-HhcCCC------CCCCCC
Confidence            667899999999999999999999999999 999998      899984

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.9e-12  Score=65.13  Aligned_cols=41  Identities=32%  Similarity=0.423  Sum_probs=28.8

Q ss_pred             ccCCCCCccCc--ccccccCChHHHHHHHHHccCCCCccCCcc
Q psy9695          71 NVAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPFRCTIC  111 (159)
Q Consensus        71 ~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  111 (159)
                      .|+++++|.|.  .|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35666677776  677777777777777777777777777665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7.9e-11  Score=58.57  Aligned_cols=41  Identities=34%  Similarity=0.449  Sum_probs=32.5

Q ss_pred             cccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          70 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        70 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      ..|.++++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            34667778888888888888888888888888888888863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.7e-11  Score=59.40  Aligned_cols=43  Identities=23%  Similarity=0.458  Sum_probs=39.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQE------TLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHH-HHHSSC------CSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            667899999999999999999999999999 999998      8999973

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7.9e-11  Score=57.98  Aligned_cols=42  Identities=14%  Similarity=0.246  Sum_probs=38.4

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |++.|+++++|.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQ-ALHAGE------SGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHH-HHHTTS------CCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHHCCC------CCCCCC
Confidence            456788999999999999999999999999 999998      899985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.8e-11  Score=58.81  Aligned_cols=42  Identities=26%  Similarity=0.623  Sum_probs=38.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |++.|++++||.|++|++.|.....|..|+ ++|.++      ++|+|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGE------KPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHG-GGSCCS------CCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCC------CCCCCC
Confidence            456789999999999999999999999999 999998      899996

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6e-11  Score=58.99  Aligned_cols=42  Identities=31%  Similarity=0.635  Sum_probs=39.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQ-QSHTGE------RHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHH-HHHTCC------CBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHH-HHcCCC------CCCCCC
Confidence            667899999999999999999999999999 999998      899997

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=8.4e-11  Score=57.21  Aligned_cols=41  Identities=29%  Similarity=0.565  Sum_probs=37.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~------k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ-RSCSQS------GPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHH-HHTTCC------CCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHh-hhcCCC------CCCCC
Confidence            456789999999999999999999999999 999998      88987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.8e-11  Score=58.74  Aligned_cols=42  Identities=24%  Similarity=0.508  Sum_probs=38.8

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQ-KTHSGQ------SGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHH-TTSSSS------CSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHH-HHcCCC------CCCCCC
Confidence            667899999999999999999999999999 899988      899985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-12  Score=64.34  Aligned_cols=39  Identities=31%  Similarity=0.506  Sum_probs=27.9

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      .|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            356666777777777777777777777777777777775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.1e-11  Score=58.97  Aligned_cols=43  Identities=19%  Similarity=0.434  Sum_probs=39.4

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |++.|.+++||.|++|++.|...+.|..|+ ++|.++      ++|+|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHL-RLHSRE------KSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHH-HHHHHT------TCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            567899999999999999999999999999 999988      8999973

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=7.1e-11  Score=58.12  Aligned_cols=43  Identities=14%  Similarity=0.283  Sum_probs=39.2

Q ss_pred             HHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          95 IHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      .|++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQ-KTHAAK------SGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHG-GGGCCC------CCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHH-HHcCCC------CCcCCC
Confidence            3667899999999999999999999999999 899998      899985

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8e-11  Score=59.02  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=39.5

Q ss_pred             HHHccCCCCccCC--cccccccccCCceeeehhhccCCCCCcccccccchhh
Q psy9695          97 MRTHTGDKPFRCT--ICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVE  146 (159)
Q Consensus        97 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C  146 (159)
                      .++|+++++|.|.  .|++.|...+.|..|+ ++|.++      ++|+|++|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSGV------KPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHH-TTSCCC------CSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHH-HHhCCC------CCCCCCCC
Confidence            4568899999998  8999999999999999 999998      89999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.2e-11  Score=59.22  Aligned_cols=44  Identities=32%  Similarity=0.335  Sum_probs=40.6

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccc
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC   52 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c   52 (159)
                      ....|.++++|.|+.|++.|.....|..|+.+|.++++|.|++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999887

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=9e-12  Score=60.50  Aligned_cols=37  Identities=32%  Similarity=0.574  Sum_probs=21.9

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      |.++++|.|+.|++.|.....|..|++.|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4455556666666666666666666666666666554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.9e-11  Score=58.09  Aligned_cols=41  Identities=27%  Similarity=0.588  Sum_probs=37.7

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV-LIHTGS------GPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHT-HHHHSC------CSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHH-HHcCCC------CCCCC
Confidence            556789999999999999999999999999 899998      88987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-12  Score=62.98  Aligned_cols=40  Identities=30%  Similarity=0.327  Sum_probs=27.5

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      +..|+++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3446666677777777777777777777777777777665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.5e-11  Score=58.59  Aligned_cols=42  Identities=38%  Similarity=0.671  Sum_probs=38.0

Q ss_pred             HHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          97 MRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      .+.|+++++|.|++|++.|.....|..|+ ++|.++      ++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGE------KSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSSC------CCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHH-HHhCCC------CCCCCCC
Confidence            34688999999999999999999999999 999998      8999974

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=8.3e-11  Score=58.48  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=39.5

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccC-CCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIG-SQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~~~~~~~C~~  145 (159)
                      |+++|.+++||.|++|++.|...+.|..|+ ++|.+ +      ++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~------~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGV------KSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHH-TTCCSCC------TTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHH-HHcCCCC------CCCCCCC
Confidence            567899999999999999999999999999 99998 8      8999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=8e-11  Score=57.33  Aligned_cols=41  Identities=32%  Similarity=0.589  Sum_probs=37.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      |++.|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIHTGS------GPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHT-TTTSCC------SSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHH-HhcCCC------CCCCC
Confidence            456789999999999999999999999999 899998      88987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.9e-11  Score=58.32  Aligned_cols=43  Identities=28%  Similarity=0.588  Sum_probs=39.3

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTGK------KPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHH-TTSCCC------CCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHH-HHhCCC------CCCCCCC
Confidence            567899999999999999999999999999 999998      8999963

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.5e-11  Score=57.62  Aligned_cols=40  Identities=33%  Similarity=0.527  Sum_probs=36.7

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      +..|.++++|.|+.|++.|.....|..|++.|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4457888999999999999999999999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.3e-11  Score=66.01  Aligned_cols=62  Identities=18%  Similarity=0.242  Sum_probs=54.5

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCC
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQ  133 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  133 (159)
                      +...+.+.+++.|..|+..|. ...|..|+ .+.+++||.|+.|++.|. ...|..|+ .+|.+..
T Consensus         8 H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~-~~c~~~~   69 (75)
T 2d9k_A            8 HEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHP-EVCGREG   69 (75)
T ss_dssp             CCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHH-HHBTTBS
T ss_pred             hCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHH-HHccCCc
Confidence            445578889999999999994 88999999 899999999999999987 59999999 8888763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.9e-11  Score=58.53  Aligned_cols=42  Identities=21%  Similarity=0.310  Sum_probs=39.0

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERT------DPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHH-HHHHHS------CCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHH-HHhCCC------CCCCCC
Confidence            667899999999999999999999999999 999988      899996

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.3e-10  Score=56.21  Aligned_cols=39  Identities=33%  Similarity=0.704  Sum_probs=35.9

Q ss_pred             HHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          98 RTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      +.|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHE-RIHTGS------GPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHG-GGCCCC------SCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCCC------CCcCC
Confidence            3578999999999999999999999999 999998      88987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.3e-11  Score=57.70  Aligned_cols=42  Identities=19%  Similarity=0.185  Sum_probs=38.0

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCC
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT  109 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  109 (159)
                      ++..|+++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445678899999999999999999999999999999999984

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.4e-10  Score=62.26  Aligned_cols=50  Identities=22%  Similarity=0.422  Sum_probs=35.2

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHhhcCCCccccc-cccccccCcccccc
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCT-ICQKAFTTKGNLKL   64 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~-~c~~~~~~~~~l~~   64 (159)
                      .-++++|.|+.|++.|. ...|..|+.+ .+++||.|+ +|++.|.....|..
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~   55 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPG   55 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHH
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHH
Confidence            44567788888888888 7778888776 666677776 66666666555554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.9e-10  Score=55.91  Aligned_cols=41  Identities=32%  Similarity=0.523  Sum_probs=37.6

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccc
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIG  143 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C  143 (159)
                      |+++|++++||.|++|++.|...+.|..|+ ++|.++      ++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~------k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHE-RTHAGV------SGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHH-GGGSSC------SCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHH-hHhcCC------CCCCC
Confidence            667899999999999999999999999999 899998      78876

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=3.4e-10  Score=55.40  Aligned_cols=41  Identities=22%  Similarity=0.322  Sum_probs=37.9

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHhhcCCCcccccc
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI   51 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~   51 (159)
                      ..|.++++|.|+.|++.|.....|..|+.+|.++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46788999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.01  E-value=2.7e-10  Score=58.64  Aligned_cols=51  Identities=16%  Similarity=0.123  Sum_probs=42.6

Q ss_pred             ccccCccccccccccccccCCCCCccCcccccccCChHHHHHHHHHccCCCCcc
Q psy9695          54 KAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFR  107 (159)
Q Consensus        54 ~~~~~~~~l~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~  107 (159)
                      +.|.....|..   ++..|.++++|.|..|++.|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~---h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEK---PRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCC---CHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhh---HHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            34556666665   5566888999999999999999999999999999999874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=4.8e-10  Score=55.65  Aligned_cols=42  Identities=33%  Similarity=0.412  Sum_probs=38.8

Q ss_pred             ccccCCCCcccCcccccccCChHHHHHHHHhhcCCCcccccc
Q psy9695          10 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI   51 (159)
Q Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~   51 (159)
                      ...|.++++|.|+.|++.|.....|..|+.+|.++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567889999999999999999999999999999999999974

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=6.7e-11  Score=63.02  Aligned_cols=39  Identities=21%  Similarity=0.314  Sum_probs=32.1

Q ss_pred             cCCCCCccCcc--cccccCChHHHHHHH-HHccCCCCccCCc
Q psy9695          72 VAGMPKHLCHV--CHKNFSSSSALQIHM-RTHTGDKPFRCTI  110 (159)
Q Consensus        72 ~~~~~~~~C~~--C~~~~~~~~~l~~H~-~~h~~~~~~~C~~  110 (159)
                      .++++||.|..  |++.|...+.|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            56788888865  999998888888886 5788888888854

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.96  E-value=6.8e-10  Score=60.51  Aligned_cols=59  Identities=34%  Similarity=0.728  Sum_probs=47.4

Q ss_pred             CccccccCCCCcccCcc--cccccCChHHHHHHHHhhcCCCcccccc--ccccccCccccccc
Q psy9695           7 PNAVFNVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKLI   65 (159)
Q Consensus         7 ~~~~~~~~~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~   65 (159)
                      ..........++|.|..  |++.|.....|..|+.+|.++++|.|.+  |++.|.....|..|
T Consensus         6 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H   68 (72)
T 2epa_A            6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH   68 (72)
T ss_dssp             CCCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHH
T ss_pred             CCCCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhH
Confidence            34455666788899988  9999999999999999998888888864  88888777766653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=2.2e-10  Score=65.05  Aligned_cols=58  Identities=16%  Similarity=0.213  Sum_probs=50.3

Q ss_pred             ccccCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccC
Q psy9695          69 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        69 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ...|.++++|.|..|++.|.....|..|+++|++++||.|..|.    ....|..|. +.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~-~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQ-KYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCC-CCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhh-ccccc
Confidence            34578889999999999999999999999999999999998654    677777788 77776

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.91  E-value=1.2e-10  Score=55.79  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=20.3

Q ss_pred             CCCCccCcccccccCChHHHHHHHHHccCCCCccC
Q psy9695          74 GMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRC  108 (159)
Q Consensus        74 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  108 (159)
                      ++++|.|..|++.|.....|..|++.|++++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            44556666666666666666666666665555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.90  E-value=6.3e-11  Score=56.03  Aligned_cols=34  Identities=29%  Similarity=0.643  Sum_probs=17.9

Q ss_pred             HHHccCCCCccCCcccccccccCCceeeehhhccC
Q psy9695          97 MRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ++.|++++||.|++|++.|...+.|..|+ ++|.+
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   36 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGTC
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHH-HHhcc
Confidence            34455555555555555555555555555 44443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.2e-09  Score=62.00  Aligned_cols=50  Identities=16%  Similarity=0.202  Sum_probs=43.0

Q ss_pred             cCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccc
Q psy9695           5 LIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQK   54 (159)
Q Consensus         5 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~   54 (159)
                      ++-.....|.++++|.|+.|++.|.....|..|+.+|.++++|.|..+..
T Consensus        12 ~~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           12 FIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             eeeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            33334567889999999999999999999999999999999999987653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.89  E-value=1.5e-09  Score=51.79  Aligned_cols=38  Identities=11%  Similarity=0.358  Sum_probs=33.5

Q ss_pred             ccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccch
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA  144 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~  144 (159)
                      |++++||.|++|++.|...+.|..|+ ++|.++      ++|.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~------k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHM-NVHRRD------RARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHH-HTTCCS------CTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHH-HHcCCC------ccceec
Confidence            56789999999999999999999999 999998      788763

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=6.1e-09  Score=55.51  Aligned_cols=40  Identities=25%  Similarity=0.422  Sum_probs=35.5

Q ss_pred             ccCCCCccCCc--ccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695         100 HTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus       100 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      .++++||+|++  |+++|.+.+.|..|++++|+++      +||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgE------KP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD------LPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC------CCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCC------CCccccc
Confidence            57899999975  9999999999999986799999      8888854

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=5.6e-10  Score=53.03  Aligned_cols=31  Identities=13%  Similarity=0.324  Sum_probs=16.9

Q ss_pred             ccCCCCccCCc--ccccccccCCceeeehhhccC
Q psy9695         100 HTGDKPFRCTI--CQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       100 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      +++++||.|++  |+++|...+.|..|+ ++|.+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHL-KVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHH-HHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCC
Confidence            34455555554  555555555555555 55554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.78  E-value=6.9e-09  Score=47.55  Aligned_cols=31  Identities=32%  Similarity=0.403  Sum_probs=24.0

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCcc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFR  107 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~  107 (159)
                      +|.|..|++.|.....|..|+++|++++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5777888888877778888887787777764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.4e-09  Score=48.60  Aligned_cols=33  Identities=24%  Similarity=0.449  Sum_probs=18.8

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            444555556566655555555555655555554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.1e-08  Score=47.97  Aligned_cols=36  Identities=22%  Similarity=0.398  Sum_probs=32.5

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHhhcCCCc
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKP   46 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~   46 (159)
                      ..|.++++|.|+.|++.|.....|..|+.+|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467889999999999999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.71  E-value=1.7e-08  Score=46.63  Aligned_cols=32  Identities=34%  Similarity=0.622  Sum_probs=17.0

Q ss_pred             CCCCCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          73 AGMPKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        73 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      .++++|.|..|++.|.....|..|++.|++++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            34445555555555555555555555555444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.71  E-value=2.1e-09  Score=48.98  Aligned_cols=28  Identities=21%  Similarity=0.376  Sum_probs=25.5

Q ss_pred             CCccCCcccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +||.|++|++.|...+.|..|+ ++|.++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~-~~H~~~   28 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHI-KTAFIV   28 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSST-TSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHH-HHHccC
Confidence            5799999999999999999999 889887

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.69  E-value=1.8e-08  Score=46.58  Aligned_cols=31  Identities=39%  Similarity=0.751  Sum_probs=14.9

Q ss_pred             ccCCCCccCCcccccccccCCceeeehhhccC
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      |++++||.|++|++.|...+.|..|+ ++|.+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHH-HHcCC
Confidence            34444455555555555555554454 44443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.68  E-value=1.6e-09  Score=54.33  Aligned_cols=32  Identities=25%  Similarity=0.615  Sum_probs=23.2

Q ss_pred             ccCCCCccCCcccccccccCCceeeehh-hccCC
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVREIE-INIGS  132 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~  132 (159)
                      |++++||.|.+|++.|.....|..|+ + +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~-~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHY-AHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHH-HHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHh-hhhcCCC
Confidence            66777777777777777777777777 5 77665

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.65  E-value=2.5e-08  Score=46.05  Aligned_cols=35  Identities=20%  Similarity=0.531  Sum_probs=31.0

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCCCc
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKP   46 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~   46 (159)
                      .|.++++|.|+.|++.|.....|..|+.+|.+++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36788999999999999999999999999987754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.65  E-value=2.7e-08  Score=45.89  Aligned_cols=34  Identities=32%  Similarity=0.574  Sum_probs=30.6

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHhhcCCCc
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKP   46 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~   46 (159)
                      |.++++|.|+.|++.|.....|..|+.+|.+++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5788899999999999999999999999987754

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=3.2e-09  Score=50.22  Aligned_cols=33  Identities=24%  Similarity=0.484  Sum_probs=18.3

Q ss_pred             CCCCccCc--ccccccCChHHHHHHHHHccCCCCc
Q psy9695          74 GMPKHLCH--VCHKNFSSSSALQIHMRTHTGDKPF  106 (159)
Q Consensus        74 ~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~  106 (159)
                      ++++|.|.  .|++.|.....|..|++.|++++||
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            44555555  3555555555555555555555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=3e-08  Score=46.72  Aligned_cols=32  Identities=34%  Similarity=0.600  Sum_probs=29.5

Q ss_pred             ccCCCCccCC--cccccccccCCceeeehhhccCC
Q psy9695         100 HTGDKPFRCT--ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       100 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |++++||.|+  .|++.|...+.|..|+ ++|.++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   34 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHK-HKHEMT   34 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHH-HHHHTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHH-HHhCCC
Confidence            5689999999  5999999999999999 999988

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.60  E-value=5.1e-08  Score=45.60  Aligned_cols=36  Identities=25%  Similarity=0.459  Sum_probs=31.6

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++..+.++++|.|+.|++.|.....|..|+.+|.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            456788999999999999999999999999988753

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=6.7e-08  Score=44.90  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=18.4

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +.++++|.|..|++.|.....|..|++.|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44455566666666666666666666555543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=6.5e-08  Score=45.76  Aligned_cols=33  Identities=21%  Similarity=0.273  Sum_probs=29.8

Q ss_pred             ccCCCCcccCcc--cccccCChHHHHHHHHhhcCC
Q psy9695          12 NVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++.+++||+|++  |+++|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999986  999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.56  E-value=5.8e-08  Score=44.31  Aligned_cols=32  Identities=31%  Similarity=0.359  Sum_probs=29.3

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCCCccc
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFR   48 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~   48 (159)
                      +||.|+.|++.|.....|..|+.+|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47999999999999999999999999998874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=7.4e-08  Score=44.68  Aligned_cols=32  Identities=25%  Similarity=0.455  Sum_probs=17.2

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      |.++++|.|..|++.|.....|..|++.|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            34445555555555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.54  E-value=3.3e-08  Score=46.15  Aligned_cols=25  Identities=32%  Similarity=0.547  Sum_probs=14.3

Q ss_pred             CCCCCccCcccccccCChHHHHHHH
Q psy9695          73 AGMPKHLCHVCHKNFSSSSALQIHM   97 (159)
Q Consensus        73 ~~~~~~~C~~C~~~~~~~~~l~~H~   97 (159)
                      .+++||.|+.|++.|.+.+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455556666666665555555555

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=1.1e-07  Score=44.11  Aligned_cols=32  Identities=38%  Similarity=0.633  Sum_probs=18.8

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34455566666666666666666666665554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=1.1e-07  Score=44.01  Aligned_cols=33  Identities=36%  Similarity=0.623  Sum_probs=30.1

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++.++++|.|+.|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            567889999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=8.2e-08  Score=44.59  Aligned_cols=31  Identities=13%  Similarity=0.327  Sum_probs=15.6

Q ss_pred             ccCCCCccCCcccccccccCCceeeehhhccC
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      |.+++||.|++|++.|...+.|..|+ ++|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHM-LVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHH-TTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHH-HHhcC
Confidence            34445555555555555555555555 44443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.52  E-value=4.9e-08  Score=45.57  Aligned_cols=32  Identities=28%  Similarity=0.596  Sum_probs=26.8

Q ss_pred             cCCCCcccCcccccccCChHHHHHHHHhhcCCCcccccc
Q psy9695          13 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTI   51 (159)
Q Consensus        13 ~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~   51 (159)
                      ..+++||+|++|+++|...+.|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46789999999999999999999998       566653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=9.9e-08  Score=44.23  Aligned_cols=33  Identities=24%  Similarity=0.451  Sum_probs=30.1

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      .+.++++|.|+.|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            577889999999999999999999999998765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=8.4e-08  Score=44.84  Aligned_cols=31  Identities=16%  Similarity=0.399  Sum_probs=16.0

Q ss_pred             ccCCCCccCCccccccccc-CCceeeehhhccC
Q psy9695         100 HTGDKPFRCTICQKAFTTK-GNLKVREIEINIG  131 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h~~  131 (159)
                      |.+++||.|++|++.|... +.|..|+ ++|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHI-WAHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHH-HHHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHH-HhcCC
Confidence            4445555555555555555 5555555 44443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=1.1e-07  Score=44.18  Aligned_cols=34  Identities=24%  Similarity=0.374  Sum_probs=30.3

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ..+.++++|.|+.|++.|.....|..|+.+|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3577889999999999999999999999998765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=8.5e-08  Score=44.52  Aligned_cols=33  Identities=21%  Similarity=0.372  Sum_probs=29.7

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++.++++|.|+.|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            567889999999999999999999999988765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.3e-07  Score=43.90  Aligned_cols=31  Identities=32%  Similarity=0.582  Sum_probs=17.5

Q ss_pred             CCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          73 AGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        73 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      .+.++|.|+.|++.|.....|..|+++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            3445556666666665555566665555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.5e-08  Score=54.06  Aligned_cols=40  Identities=18%  Similarity=0.284  Sum_probs=28.9

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCCCccCCccc
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQ  112 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~  112 (159)
                      +.++++|.|..|++.|.....|..|+++|+++. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            456678888888888888888888888888754 3444444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=7.4e-08  Score=52.85  Aligned_cols=59  Identities=17%  Similarity=0.227  Sum_probs=46.6

Q ss_pred             CccCCccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCcccccc
Q psy9695           3 GKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKL   64 (159)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~   64 (159)
                      +..+..+...+.+++++.|..|++.|. ...|..|+ .+.+++++.|+.|+..+. ...|..
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~   60 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKT   60 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGT
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHH
Confidence            345667777888999999999999994 88888998 788888888888888765 355554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-07  Score=44.49  Aligned_cols=34  Identities=26%  Similarity=0.340  Sum_probs=30.3

Q ss_pred             cccCCCCcccCcccccccCCh-HHHHHHHHhhcCC
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSS-SALQIHMRTHTGD   44 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~-~~~~~h~~~~~~~   44 (159)
                      ..|.++++|.|+.|++.|... ..|..|+.+|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            357788999999999999999 9999999998765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=2.7e-09  Score=53.17  Aligned_cols=34  Identities=24%  Similarity=0.484  Sum_probs=22.9

Q ss_pred             HHccCCCCccCC--cccccccccCCceeeehhhccCC
Q psy9695          98 RTHTGDKPFRCT--ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        98 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ..|++++||.|+  .|++.|...+.|..|+ ++|.++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~-~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHH-HHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHH-HHccCC
Confidence            346667777774  5777777777777777 666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=1.6e-08  Score=44.87  Aligned_cols=29  Identities=34%  Similarity=0.731  Sum_probs=23.3

Q ss_pred             CCCccCCcccccccccCCceeeehhhccCC
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ++||.|+.|++.|...+.|..|+ ++|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHV-RIHTGE   29 (30)
Confidence            36788888888888888888888 777654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-07  Score=44.58  Aligned_cols=34  Identities=18%  Similarity=0.288  Sum_probs=29.9

Q ss_pred             cccCCCCcccCcccccccCChHHHHHH-HHhhcCC
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIH-MRTHTGD   44 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h-~~~~~~~   44 (159)
                      ..|.+++||+|+.|++.|.....|..| +.+|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467889999999999999999999999 8888653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=44.49  Aligned_cols=28  Identities=36%  Similarity=0.698  Sum_probs=22.7

Q ss_pred             CCccCCcccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +||.|++|++.|...+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHV-RQHTGE   28 (29)
Confidence            4788888888888888888888 777764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.5e-07  Score=43.62  Aligned_cols=33  Identities=30%  Similarity=0.523  Sum_probs=29.9

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      .+.++++|.|+.|++.|.....|..|+.+|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            467888999999999999999999999999765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.8e-08  Score=43.27  Aligned_cols=25  Identities=28%  Similarity=0.573  Sum_probs=20.8

Q ss_pred             CCccCCcccccccccCCceeeehhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +||.|++||+.|...+.|..|+ ++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~-~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHI-RHH   25 (26)
Confidence            4788888888888888888888 665

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=1.2e-08  Score=44.61  Aligned_cols=25  Identities=24%  Similarity=0.809  Sum_probs=13.4

Q ss_pred             CCccCCcccccccccCCceeeehhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +||.|++|++.|...+.|..|+ ++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY-RVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH-TTS
T ss_pred             cCccCCCCCcccCCHHHHHHHH-Hhc
Confidence            4555555555555555555555 444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.4e-07  Score=44.15  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=15.1

Q ss_pred             ccCCCCccCCcccccccccCCceee-ehhhcc
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVR-EIEINI  130 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~  130 (159)
                      |++++||.|+.|++.|...+.|..| + ++|.
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~-~~H~   34 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVI-QKHS   34 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHH-HHTC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHH-HHcc
Confidence            4445555555555555555555555 3 4444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=1.1e-08  Score=44.55  Aligned_cols=25  Identities=16%  Similarity=0.596  Sum_probs=14.7

Q ss_pred             CCccCCcccccccccCCceeeehhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +||.|++||+.|...+.|..|+ ++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM-RGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH-TTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHH-Hhc
Confidence            4566666666666666666665 444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.6e-08  Score=43.91  Aligned_cols=24  Identities=33%  Similarity=0.618  Sum_probs=11.6

Q ss_pred             CccCcccccccCChHHHHHHHHHc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      +|.|..|++.|.....|..|++.|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            444555555554444444444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.41  E-value=2.9e-08  Score=43.70  Aligned_cols=26  Identities=23%  Similarity=0.499  Sum_probs=13.7

Q ss_pred             CccCCcccccccccCCceeeehhhccC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ||.|+.|++.|...+.|..|+ ++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHI-LLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHH-TGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHH-HHhcC
Confidence            455555555555555555555 44443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=5.2e-08  Score=43.99  Aligned_cols=27  Identities=26%  Similarity=0.596  Sum_probs=14.6

Q ss_pred             CCccCC--cccccccccCCceeeehhhccC
Q psy9695         104 KPFRCT--ICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       104 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      +||.|+  .|+++|...+.|..|+ ++|.+
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHH-HHccC
Confidence            455555  4555555555555555 55544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.38  E-value=2.9e-07  Score=43.00  Aligned_cols=32  Identities=38%  Similarity=0.752  Sum_probs=17.6

Q ss_pred             cCCCCCccCc--ccccccCChHHHHHHHHHccCC
Q psy9695          72 VAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        72 ~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ++++++|.|.  .|++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3445555555  2555555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=3.8e-08  Score=43.17  Aligned_cols=26  Identities=38%  Similarity=0.755  Sum_probs=13.4

Q ss_pred             CccCCcccccccccCCceeeehhhccC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ||.|+.|++.|...+.|..|+ ++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHL-KIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHH-HHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHH-HHhcc
Confidence            455555555555555555555 44443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.37  E-value=1.1e-08  Score=46.51  Aligned_cols=30  Identities=30%  Similarity=0.437  Sum_probs=24.0

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPF  106 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~  106 (159)
                      +|.|..|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            678888888888888888888888887775

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.36  E-value=2.4e-07  Score=46.10  Aligned_cols=35  Identities=17%  Similarity=0.418  Sum_probs=28.6

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHH-hhcCCCc
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMR-THTGDKP   46 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~-~~~~~~~   46 (159)
                      .|.++++|.|..|++.|.....|..|+. +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3678899999999999999999999999 8876643

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.35  E-value=4.3e-08  Score=42.35  Aligned_cols=24  Identities=21%  Similarity=0.767  Sum_probs=11.7

Q ss_pred             ccCCcccccccccCCceeeehhhcc
Q psy9695         106 FRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       106 ~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      |.|++|++.|...+.|..|+ ++|.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~-~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQ-RVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHH-HHcC
Confidence            44555555555555555454 4443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=3.8e-07  Score=40.10  Aligned_cols=27  Identities=30%  Similarity=0.600  Sum_probs=14.6

Q ss_pred             CccCcccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.34  E-value=5e-07  Score=39.44  Aligned_cols=27  Identities=33%  Similarity=0.801  Sum_probs=16.7

Q ss_pred             CccCcccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            456666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.33  E-value=3.8e-07  Score=39.88  Aligned_cols=29  Identities=34%  Similarity=0.579  Sum_probs=25.8

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      ++|.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            37899999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=4.1e-07  Score=39.69  Aligned_cols=27  Identities=37%  Similarity=0.799  Sum_probs=17.0

Q ss_pred             CccCcccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            466666666666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.31  E-value=6.2e-07  Score=39.38  Aligned_cols=28  Identities=25%  Similarity=0.485  Sum_probs=16.3

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      +|.|..|++.|.....|..|++.|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4556666666666666666666555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=4.7e-07  Score=39.45  Aligned_cols=29  Identities=31%  Similarity=0.702  Sum_probs=25.9

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      ++|.|+.|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            37899999999999999999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=9.6e-08  Score=42.27  Aligned_cols=28  Identities=29%  Similarity=0.656  Sum_probs=15.9

Q ss_pred             CccCCcccccccccCCceeeehhhccCC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ||.|+.|++.|...+.|..|+.++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            5566666666666666666622555543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.28  E-value=6.5e-07  Score=41.75  Aligned_cols=33  Identities=36%  Similarity=0.816  Sum_probs=29.4

Q ss_pred             ccCCCCcccCcc--cccccCChHHHHHHHHhhcCC
Q psy9695          12 NVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      .++++++|.|..  |++.|.....|..|+.+|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467889999984  999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.28  E-value=7.9e-08  Score=43.04  Aligned_cols=27  Identities=48%  Similarity=0.872  Sum_probs=13.9

Q ss_pred             CccCc--ccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCH--VCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~--~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ||.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            34554  5555555555555555555443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=4e-07  Score=45.02  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=32.9

Q ss_pred             ccCCccccccCCCCcccCc--ccccccCChHHHHHHHHhhcCC
Q psy9695           4 KLIPNAVFNVAGMPKHLCH--VCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus         4 ~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      +.+.+. ..|.++++|.|+  .|++.|.....|..|+.+|.++
T Consensus         5 ~~~~~~-~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            5 GSIDKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGS-CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHH-hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344443 458899999995  7999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=7.2e-07  Score=39.16  Aligned_cols=29  Identities=31%  Similarity=0.602  Sum_probs=25.9

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      +++|.|+.|++.|.....|..|+.+|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46899999999999999999999988765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.26  E-value=8.3e-07  Score=39.51  Aligned_cols=28  Identities=36%  Similarity=0.772  Sum_probs=25.5

Q ss_pred             CCccCC--cccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCT--ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +||.|+  .||+.|...+.|..|+ ++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHH-HHhcCC
Confidence            589998  8999999999999999 899875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=1.1e-06  Score=39.32  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=26.1

Q ss_pred             CCccCc--ccccccCChHHHHHHHHHccCCC
Q psy9695          76 PKHLCH--VCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        76 ~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            579999  89999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=1.2e-06  Score=46.69  Aligned_cols=36  Identities=19%  Similarity=0.284  Sum_probs=32.0

Q ss_pred             ccccCCCCcccCcccccccCChHHHHHHHHhhcCCC
Q psy9695          10 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDK   45 (159)
Q Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~   45 (159)
                      ...+.+++||+|.+|++.|.....|..|+++|+++.
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            345788999999999999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.21  E-value=1.3e-06  Score=37.99  Aligned_cols=28  Identities=32%  Similarity=0.762  Sum_probs=25.2

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++|.|+.|++.|.....|..|+.+|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3689999999999999999999998765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.20  E-value=1.3e-06  Score=37.52  Aligned_cols=27  Identities=19%  Similarity=0.465  Sum_probs=23.9

Q ss_pred             CCCccCCcccccccccCCceeeehhhcc
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      ++||.|+.||+.|...+.|..|+ ++|.
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~-~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHL-RTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHH-HHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHH-HHcc
Confidence            57899999999999999999998 7763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.20  E-value=9.3e-07  Score=37.86  Aligned_cols=27  Identities=33%  Similarity=0.640  Sum_probs=23.0

Q ss_pred             CccCcccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            488999999999999999999988763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.18  E-value=1.4e-06  Score=38.19  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=25.8

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCCC
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGDK   45 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~~   45 (159)
                      ++|.|+.|++.|.....|..|+.+|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36899999999999999999999988764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.4e-07  Score=40.62  Aligned_cols=28  Identities=43%  Similarity=0.813  Sum_probs=24.1

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      +|.|..|++.|.....|..|++.|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            6889999999999999999998887653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.16  E-value=1.3e-06  Score=37.77  Aligned_cols=27  Identities=41%  Similarity=0.726  Sum_probs=23.9

Q ss_pred             CCccCcccccccCChHHHHHHHHHccC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~  102 (159)
                      ++|.|..|++.|.....|..|++.|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            579999999999999999999988763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=9e-07  Score=38.09  Aligned_cols=26  Identities=31%  Similarity=0.583  Sum_probs=22.8

Q ss_pred             CCcccCcccccccCChHHHHHHHHhh
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTH   41 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~   41 (159)
                      ++||.|+.|++.|.....|..|+.+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46799999999999999999998776

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=1.6e-06  Score=37.69  Aligned_cols=28  Identities=36%  Similarity=0.751  Sum_probs=25.3

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      .+|.|+.|++.|.....|..|+.+|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3689999999999999999999998765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.13  E-value=1.5e-06  Score=38.21  Aligned_cols=28  Identities=25%  Similarity=0.615  Sum_probs=24.4

Q ss_pred             CccCcccccccCChHHHHHH-HHHccCCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIH-MRTHTGDK  104 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H-~~~h~~~~  104 (159)
                      +|.|..|++.|.....|..| ++.|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            68999999999999999999 68888763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.2e-07  Score=40.44  Aligned_cols=28  Identities=39%  Similarity=0.802  Sum_probs=24.2

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ++|.|..|++.|.....|..|++.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4788999999999999999999888765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.03  E-value=3.5e-07  Score=39.97  Aligned_cols=23  Identities=30%  Similarity=0.742  Sum_probs=11.5

Q ss_pred             ccCc--ccccccCChHHHHHHHHHc
Q psy9695          78 HLCH--VCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        78 ~~C~--~C~~~~~~~~~l~~H~~~h  100 (159)
                      |.|.  .|++.|...+.|..|+++|
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHh
Confidence            4444  5555555555555554444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.16  E-value=1.3e-06  Score=37.09  Aligned_cols=24  Identities=42%  Similarity=0.733  Sum_probs=20.0

Q ss_pred             CccCcccccccCChHHHHHHHHHc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      +|.|..|++.|.....|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            688888888888888888888766

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.81  E-value=1.1e-05  Score=34.91  Aligned_cols=27  Identities=22%  Similarity=0.613  Sum_probs=23.8

Q ss_pred             CCccCC--cccccccccCCceeeehhhccC
Q psy9695         104 KPFRCT--ICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       104 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ++|.|+  .|++.|...+.|..|+ ++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~-~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHK-KIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHH-GGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHH-HHhCC
Confidence            478999  9999999999999999 88764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.21  E-value=0.00014  Score=38.29  Aligned_cols=46  Identities=22%  Similarity=0.307  Sum_probs=36.8

Q ss_pred             cccccccCChHHHHHHHH-HccCCC------CccCC--cccccccccCCceeeeh
Q psy9695          81 HVCHKNFSSSSALQIHMR-THTGDK------PFRCT--ICQKAFTTKGNLKVREI  126 (159)
Q Consensus        81 ~~C~~~~~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~  126 (159)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  .|+..+.....|..|++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            358899999999999974 677655      78996  59888888888888883

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.20  E-value=1.8e-05  Score=47.08  Aligned_cols=26  Identities=31%  Similarity=0.519  Sum_probs=16.5

Q ss_pred             ccCCCCccCCcccccccccCCceeee
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      |+|+++|.|..|++.|.+.+.|..|+
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHH
Confidence            55566666666666666666666666

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.36  E-value=0.0041  Score=30.00  Aligned_cols=24  Identities=29%  Similarity=0.598  Sum_probs=20.0

Q ss_pred             CCccCcccccccCChHHHHHHHHH
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      ..|.|+.|+..|.....|..|++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            468899999999888888888883

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.23  E-value=0.0022  Score=38.52  Aligned_cols=23  Identities=26%  Similarity=0.446  Sum_probs=20.0

Q ss_pred             CCcccCcccccccCChHHHHHHH
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHM   38 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~   38 (159)
                      ..++.|..|...|.+...+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHH
Confidence            35688999999999999999988

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.17  E-value=0.0012  Score=39.28  Aligned_cols=33  Identities=27%  Similarity=0.495  Sum_probs=28.7

Q ss_pred             ccccccCCCCcccCcccccccCChHHHHHHHHh
Q psy9695           8 NAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRT   40 (159)
Q Consensus         8 ~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~   40 (159)
                      ....+++|+.+|.|..|++.|.+...|..|++.
T Consensus        40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            456788899999999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.14  E-value=0.0013  Score=39.49  Aligned_cols=23  Identities=17%  Similarity=0.424  Sum_probs=12.4

Q ss_pred             CCCccCCcccccccccCCceeee
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      ...|.|..|+++|.+...|..|.
T Consensus        91 ~~~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           91 DRSKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             CTTTEETTTTEECSSHHHHHHHH
T ss_pred             CCCeEcCCCCCEeCCHHHHHHHH
Confidence            34455555555555555555554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.00  E-value=0.00037  Score=36.61  Aligned_cols=51  Identities=6%  Similarity=0.076  Sum_probs=38.2

Q ss_pred             ccCCc--ccccccccCCceeeehhhccCCCCCcccccccch--hhchhhhhcccc
Q psy9695         106 FRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGA--VEGKSFQAKHKT  156 (159)
Q Consensus       106 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~--~C~~~f~~~~~l  156 (159)
                      +.|.+  |++.|.....|..|+...|.+.........|.|.  .|+..+.....|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L   56 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASI   56 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHH
Confidence            45655  9999999999999997788876322233489995  898887766555

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.96  E-value=0.0012  Score=31.89  Aligned_cols=28  Identities=14%  Similarity=0.156  Sum_probs=24.0

Q ss_pred             CCccCCcccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      -+|.|+.|+..|.....|+.|| +--.++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hm-kycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHM-CYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHH-HHHCTT
T ss_pred             CceeCCcccccccchHHHHhhh-hhcCcc
Confidence            5789999999999999999999 555554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=94.60  E-value=0.014  Score=31.49  Aligned_cols=48  Identities=17%  Similarity=0.333  Sum_probs=37.6

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeee
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      -.|.|..|+.++.-+ .+..|.....+...|.|..|++.|.. ...+.|.
T Consensus         9 V~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            9 VFFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CEEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eEEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            358999999887654 67889877766567999999999985 5566676

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.28  E-value=0.0083  Score=37.78  Aligned_cols=122  Identities=14%  Similarity=0.166  Sum_probs=67.1

Q ss_pred             CCcccCcccccccCChHH-----------HHHHHHhhcCCCccccccccccccCccccccccccccccCCCCCccC--cc
Q psy9695          16 MPKHLCHVCHKNFSSSSA-----------LQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLC--HV   82 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~-----------~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~C--~~   82 (159)
                      +..+.|+.|...|.....           +...+..    ....|+.|...+.....+..  ..+..........|  ..
T Consensus        16 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~~~~~~~~~~--~~~~~~i~~l~v~C~n~G   89 (170)
T 3hcs_A           16 ESKYECPICLMALREAVQTPCGHRFCKACIIKSIRD----AGHKCPVDNEILLENQLFPD--NFAKREILSLMVKCPNEG   89 (170)
T ss_dssp             CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH----HCSBCTTTCCBCCGGGCEEC--HHHHHHHHTSEEECCSTT
T ss_pred             CCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHh----CCCCCCCCccCcchhhhhhh--HHHHHHHhhcccCCCCCC
Confidence            445788888776655322           2222211    12378888777655332211  01111112233456  45


Q ss_pred             cccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchhhchhhhhc
Q psy9695          83 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAVEGKSFQAK  153 (159)
Q Consensus        83 C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~C~~~f~~~  153 (159)
                      |+..+. ...+..|...- .-++..|+.|+..+ ....|..|. ......      +.-.|+.|+..|...
T Consensus        90 C~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~------r~~~C~~C~~~~~~~  150 (170)
T 3hcs_A           90 CLHKME-LRHLEDHQAHC-EFALMDCPQCQRPF-QKFHINIHI-LKDCPR------RQVSCDNCAASMAFE  150 (170)
T ss_dssp             CCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEE-EGGGHHHHH-HHTCTT------CEEECTTTCCEEEGG
T ss_pred             CCceec-HhHHHHHHhcC-CceeeECCCCChHH-HHHHHHHHh-hhhCCC------CCeECCCCCCccCHH
Confidence            766553 34667776433 24567788888776 556677787 666655      667788888766543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.27  E-value=0.046  Score=24.56  Aligned_cols=26  Identities=23%  Similarity=0.441  Sum_probs=22.3

Q ss_pred             CcccCcccccccCChHHHHHHHHhhc
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      ..|.|+.|.+.+.+...|..|....+
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            35999999999999999999986543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.29  E-value=0.0076  Score=27.14  Aligned_cols=21  Identities=29%  Similarity=0.597  Sum_probs=11.5

Q ss_pred             ccCcccccccCChHHHHHHHH
Q psy9695          78 HLCHVCHKNFSSSSALQIHMR   98 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~   98 (159)
                      |.|+.|-+.+.+...|..|-.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHH
Confidence            555555555555555555543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=91.82  E-value=0.079  Score=25.43  Aligned_cols=12  Identities=33%  Similarity=0.761  Sum_probs=5.4

Q ss_pred             ccCcccccccCC
Q psy9695          78 HLCHVCHKNFSS   89 (159)
Q Consensus        78 ~~C~~C~~~~~~   89 (159)
                      |.|..||..|..
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            455555555433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.86  E-value=0.081  Score=33.19  Aligned_cols=54  Identities=13%  Similarity=0.329  Sum_probs=41.8

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      .+..|+.|+..+ ....|..|....-..++-.|+.|+..+.. ..|..|. .++.|.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~-~~~~~~  162 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHD-QNCPLA  162 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHH-TTCCC-
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHH-HhCcCh
Confidence            456899999887 45678999977777788899999987754 5667788 777776

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=89.76  E-value=0.12  Score=33.57  Aligned_cols=12  Identities=33%  Similarity=0.705  Sum_probs=7.1

Q ss_pred             CccCcccccccC
Q psy9695          77 KHLCHVCHKNFS   88 (159)
Q Consensus        77 ~~~C~~C~~~~~   88 (159)
                      .|.|..||..+.
T Consensus       171 ~~~C~~CG~i~~  182 (202)
T 1yuz_A          171 FHLCPICGYIHK  182 (202)
T ss_dssp             EEECSSSCCEEE
T ss_pred             EEEECCCCCEEc
Confidence            466666666543

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=89.58  E-value=0.03  Score=30.25  Aligned_cols=15  Identities=33%  Similarity=0.848  Sum_probs=11.6

Q ss_pred             CCccCCccccccccc
Q psy9695         104 KPFRCTICQKAFTTK  118 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~  118 (159)
                      -.|+||.||..|.-.
T Consensus        50 F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           50 FVFKCPVCGEEFYGK   64 (95)
T ss_dssp             SEEECTTTCCEEETT
T ss_pred             HhhcCCCccHHHhcc
Confidence            458999999888644

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=89.13  E-value=0.3  Score=27.98  Aligned_cols=11  Identities=27%  Similarity=0.576  Sum_probs=5.2

Q ss_pred             CccCccccccc
Q psy9695          77 KHLCHVCHKNF   87 (159)
Q Consensus        77 ~~~C~~C~~~~   87 (159)
                      +|.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            34444444444

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.84  E-value=0.35  Score=26.12  Aligned_cols=46  Identities=20%  Similarity=0.407  Sum_probs=34.1

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccC
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTT   58 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~   58 (159)
                      .+.....|.|+.|+..+.. ..+..|...-.+-..|.|-.|+..|..
T Consensus         4 ~~~~MV~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            4 GSSGMVFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             SSCCCCEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             CCCceeEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC
Confidence            4556777999999987654 457778765555457899999999874

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=88.15  E-value=0.11  Score=25.02  Aligned_cols=12  Identities=33%  Similarity=0.927  Sum_probs=6.6

Q ss_pred             CccCcccccccC
Q psy9695          77 KHLCHVCHKNFS   88 (159)
Q Consensus        77 ~~~C~~C~~~~~   88 (159)
                      .|.|..||..+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            355666665554

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=87.30  E-value=0.46  Score=23.72  Aligned_cols=11  Identities=27%  Similarity=0.664  Sum_probs=5.7

Q ss_pred             ccCcccccccC
Q psy9695          78 HLCHVCHKNFS   88 (159)
Q Consensus        78 ~~C~~C~~~~~   88 (159)
                      |.|..||..+.
T Consensus         4 y~C~vCGyvYd   14 (54)
T 4rxn_A            4 YTCTVCGYIYD   14 (54)
T ss_dssp             EEETTTCCEEC
T ss_pred             eECCCCCeEEC
Confidence            55555555443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.85  E-value=1.2  Score=20.02  Aligned_cols=24  Identities=21%  Similarity=0.426  Sum_probs=17.2

Q ss_pred             CCccCcccccccCChHHHHHHHHH
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      ..+.|..|+-.|.+...+..|++-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            346777777777777777777764

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=85.45  E-value=0.62  Score=23.04  Aligned_cols=11  Identities=27%  Similarity=0.869  Sum_probs=6.0

Q ss_pred             ccCcccccccC
Q psy9695          78 HLCHVCHKNFS   88 (159)
Q Consensus        78 ~~C~~C~~~~~   88 (159)
                      |.|..||..+.
T Consensus         4 y~C~~CGyvYd   14 (52)
T 1e8j_A            4 YVCTVCGYEYD   14 (52)
T ss_dssp             EECSSSCCCCC
T ss_pred             EEeCCCCeEEc
Confidence            55555555543

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=85.35  E-value=0.43  Score=26.00  Aligned_cols=12  Identities=17%  Similarity=0.465  Sum_probs=7.6

Q ss_pred             CccCcccccccC
Q psy9695          77 KHLCHVCHKNFS   88 (159)
Q Consensus        77 ~~~C~~C~~~~~   88 (159)
                      .|.|..||.++.
T Consensus        27 ~y~C~vCGyvYD   38 (81)
T 2kn9_A           27 LFRCIQCGFEYD   38 (81)
T ss_dssp             EEEETTTCCEEE
T ss_pred             eEEeCCCCEEEc
Confidence            466777766654

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.34  E-value=0.26  Score=24.44  Aligned_cols=20  Identities=15%  Similarity=0.479  Sum_probs=17.3

Q ss_pred             ccCCcccccccccCCceeee
Q psy9695         106 FRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       106 ~~C~~C~~~f~~~~~l~~H~  125 (159)
                      -.|..|+..|...-+++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58999999999888888887

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=83.85  E-value=0.81  Score=19.44  Aligned_cols=22  Identities=27%  Similarity=0.513  Sum_probs=19.1

Q ss_pred             cccCcccccccCChHHHHHHHH
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMR   39 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~   39 (159)
                      -+.|+.|....++...+..|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4789999999999999988865

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=83.44  E-value=0.44  Score=29.98  Aligned_cols=23  Identities=22%  Similarity=0.683  Sum_probs=13.8

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCccCCccc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQ  112 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~  112 (159)
                      .|.|+.||.++.             ++.|-.||+||
T Consensus       138 ~~~C~~CG~i~~-------------~~~p~~CP~Cg  160 (170)
T 3pwf_A          138 VYICPICGYTAV-------------DEAPEYCPVCG  160 (170)
T ss_dssp             EEECTTTCCEEE-------------SCCCSBCTTTC
T ss_pred             eeEeCCCCCeeC-------------CCCCCCCCCCC
Confidence            466777776653             13455677776

>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...

Probab=83.05  E-value=0.63  Score=23.03  Aligned_cols=9  Identities=11%  Similarity=0.243  Sum_probs=4.4

Q ss_pred             cccchhhch
Q psy9695         140 QHIGAVEGK  148 (159)
Q Consensus       140 ~~~C~~C~~  148 (159)
                      .|.|++|+.
T Consensus        35 dw~CP~Cg~   43 (52)
T 1yk4_A           35 DWVCPLCGA   43 (52)
T ss_dssp             TCBCTTTCC
T ss_pred             CCcCCCCCC
Confidence            345555553

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=82.31  E-value=0.65  Score=27.27  Aligned_cols=26  Identities=19%  Similarity=0.577  Sum_probs=18.9

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCc-cCCccccc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPF-RCTICQKA  114 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~-~C~~C~~~  114 (159)
                      .|.|..||..|..            .+.++ .||.||..
T Consensus        73 ~~~C~~CG~~~e~------------~~~~~~~CP~Cgs~   99 (119)
T 2kdx_A           73 ELECKDCSHVFKP------------NALDYGVCEKCHSK   99 (119)
T ss_dssp             EEECSSSSCEECS------------CCSTTCCCSSSSSC
T ss_pred             eEEcCCCCCEEeC------------CCCCCCcCccccCC
Confidence            4888999888755            13467 88888855

>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z

Probab=81.04  E-value=0.28  Score=28.59  Aligned_cols=12  Identities=8%  Similarity=-0.122  Sum_probs=6.7

Q ss_pred             cccchhhchhhh
Q psy9695         140 QHIGAVEGKSFQ  151 (159)
Q Consensus       140 ~~~C~~C~~~f~  151 (159)
                      .+.|..|++.|.
T Consensus        78 IW~C~~Cgk~fA   89 (116)
T 3cc2_Z           78 IWQCSYCDYKFT   89 (116)
T ss_dssp             EEEETTTCCEEE
T ss_pred             eEECCCCCCEEE
Confidence            356666665553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	6e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	6e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	0.001
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.003
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.003

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 6e-08
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
             C K+F+    L+ HM+ H+  + + C
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 6e-08
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 80  CHVCHKNFSSSSALQIHMRTHTGDKPFRC 108
              C K+F+    L+ HM+ H+  + + C
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (105), Expect = 7e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 19 HLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTI 51
          ++C  C K FS    L  H++  HT ++P +C +
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (105), Expect = 7e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 78  HLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTI 110
           ++C  C K FS    L  H++  HT ++P +C +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 8e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 98  RTHTGDKPFRCTICQKAFTTKGNLKV 123
           RTH+G+KP+ C IC   FT  G +K+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKM 26

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 9e-07
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 39 RTHTGDKPFRCTICQKAFTTKGNLK 63
          RTH+G+KP+ C IC   FT  G +K
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMK 25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-06
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 44  DKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH 100
           DK + C  C K+FT K         +    G+  + C VC K F     L  HM+ H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRD---RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 83  CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
           C K+F+  S    HM  H G +P+ C +C K F  K +L  
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVG 48

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 2e-05
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 24 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 63
          C K+F+  S    HM  H G +P+ C +C K F  K +L 
Sbjct: 8  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLV 47

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 3e-06
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
             R  TG KPF+C  C ++F+   +L +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLAL 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (93), Expect = 3e-06
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 37 HMRTHTGDKPFRCTICQKAFTTKGNLK 63
            R  TG KPF+C  C ++F+   +L 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLA 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 4e-06
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
          C VC + F+    L+ H R+HT +K
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 4e-06
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 80  CHVCHKNFSSSSALQIHMRTHTGDK 104
           C VC + F+    L+ H R+HT +K
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEK 29

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 5e-06
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 98  RTHTGDKPFRCTICQKAFTTKGNLKV 123
           RTHTG+KP+ C+ C K F  K  L +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDM 26

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 6e-06
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 39 RTHTGDKPFRCTICQKAFTTKGNLK 63
          RTHTG+KP+ C+ C K F  K  L 
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLD 25

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 7e-04
 Identities = 6/25 (24%), Positives = 9/25 (36%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
          C  C K F     L +H + +    
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
          C  C K F  S  L  H++TH   K
Sbjct: 5  CPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 80  CHVCHKNFSSSSALQIHMRTHTGDK 104
           C  C K F  S  L  H++TH   K
Sbjct: 5   CPECPKRFMRSDHLSKHIKTHQNKK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.2 bits (87), Expect = 2e-05
 Identities = 13/23 (56%), Positives = 16/23 (69%)

Query: 21 CHVCHKNFSSSSALQIHMRTHTG 43
          C +C +NFS S  L  H+RTHTG
Sbjct: 6  CRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.2 bits (87), Expect = 2e-05
 Identities = 13/23 (56%), Positives = 16/23 (69%)

Query: 80  CHVCHKNFSSSSALQIHMRTHTG 102
           C +C +NFS S  L  H+RTHTG
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTG 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (87), Expect = 3e-05
 Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 31/62 (50%)

Query: 41  HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH 100
           H+G+KP+ C  C KAF+    L                                 H R H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILV-------------------------------QHQRVH 30

Query: 101 TG 102
           TG
Sbjct: 31  TG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (86), Expect = 3e-05
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 19 HLCHVCHKNFSSSSALQIHMRTHTG 43
          + C  C K FS SS L  H R HTG
Sbjct: 8  YGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 5e-05
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 100 HTGDKPFRCTICQKAFTTKGNLKV 123
           H+G+KP+ C  C KAF+    L  
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQ 25

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 5e-05
 Identities = 5/28 (17%), Positives = 11/28 (39%)

Query: 96  HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
                   + ++C  C K+F+   +L  
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSK 30

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 6e-05
 Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 31/66 (46%)

Query: 37  HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
                   + ++C  C K+F+   +L                                 H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLS-------------------------------KH 31

Query: 97  MRTHTG 102
            RTHTG
Sbjct: 32  RRTHTG 37

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 9e-05
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 24 CHKNFSSSSALQIHMRTHTGDK 45
          C K F+ S  LQ H RTHTG+K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 9e-05
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 83  CHKNFSSSSALQIHMRTHTGDK 104
           C K F+ S  LQ H RTHTG+K
Sbjct: 10  CGKRFTRSDELQRHKRTHTGEK 31

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (81), Expect = 2e-04
 Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 32  SALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSS 91
            ++  +++    DK F C                                 C K F    
Sbjct: 5   GSIDKYVK-EMPDKTFECLFPG-----------------------------CTKTFKRRY 34

Query: 92  ALQIHMRTHTGDK 104
            ++ H++TH  D+
Sbjct: 35  NIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.4 bits (76), Expect = 9e-04
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDK 45
          + L   C K F     ++ H++TH  D+
Sbjct: 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 24 CHKNFSSSSALQIHMRTHTGD 44
          C K++S    L+ H+R+HTG+
Sbjct: 10 CRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 83  CHKNFSSSSALQIHMRTHTGD 103
           C K++S    L+ H+R+HTG+
Sbjct: 10  CRKSYSRLENLKTHLRSHTGE 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 24 CHKNFSSSSALQIHMRTHTG 43
          C + FS S+ L  H+R HTG
Sbjct: 10 CDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 83  CHKNFSSSSALQIHMRTHTG 102
           C + FS S+ L  H+R HTG
Sbjct: 10  CDRRFSRSADLTRHIRIHTG 29

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDK 45
           + C  C + F S+ AL  HM  H  D+
Sbjct: 5  SYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 77  KHLCHVCHKNFSSSSALQIHMRTHTGDK 104
            + C  C + F S+ AL  HM  H  D+
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.0 bits (73), Expect = 0.002
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 100 HTGDKPFRCTICQKAFTTKGNLKV 123
            +G +PF C IC  AFTTK N   
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCAR 25

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.0 bits (73), Expect = 0.002
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 41 HTGDKPFRCTICQKAFTTKGNLK 63
           +G +PF C IC  AFTTK N  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCA 24

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 21 CHVCHKNFSSSSALQIHMRTHT 42
          C  C K FS +S L  H R HT
Sbjct: 5  CLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 80  CHVCHKNFSSSSALQIHMRTHT 101
           C  C K FS +S L  H R HT
Sbjct: 5   CLECGKAFSQNSGLINHQRIHT 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.43
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.42
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.4
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.32
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.27
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.18
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.18
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.09
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.09
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.06
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.97
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.92
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.9
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.89
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.89
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.75
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.73
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.66
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.53
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.36
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.27
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.24
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.94
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.89
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.87
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.74
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.58
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.58
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.52
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.52
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.51
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.41
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.41
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.4
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.4
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.23
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.19
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.16
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.14
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.13
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.05
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.01
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.0
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.71
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.46
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.44
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.4
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.25
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.19
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.11
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.04
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.96
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.69
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.65
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.63
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.54
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.45
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	95.43
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.34
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.31
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.08
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.98
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.9
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.42
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	94.02
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.96
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.32
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	93.21
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.92
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.56
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.35
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.32
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.09
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	89.04
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.27
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	88.02
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.93
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.83
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.89
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	86.72
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	86.25
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.99
d2dsxa1	52	Rubredoxin {Desulfovibrio gigas [TaxId: 879]}	85.4
d1brfa_	53	Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2	84.58
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	83.86
d1qypa_	57	RBP9 subunit of RNA polymerase II {Archaeon Thermo	83.37
d1tfia_	50	Transcriptional factor SII, C-terminal domain {Hum	82.4
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	82.05
d1jj2y_	73	Ribosomal protein L37ae {Archaeon Haloarcula maris	81.9
d1vqoz1	73	Ribosomal protein L37ae {Archaeon Haloarcula maris	81.77
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.0

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.1e-19  Score=90.99  Aligned_cols=53  Identities=32%  Similarity=0.580  Sum_probs=50.1

Q ss_pred             CCCccCcccccccCChHHHHHHHHHccCCCCccCCcccccccccCCceeeehhhc
Q psy9695          75 MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus        75 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +++|.| .||+.|.....|..|+++|++++||.|++||++|...+.|..|+ ++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~-r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHH-hcC
Confidence            468999 59999999999999999999999999999999999999999999 776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.1e-14  Score=73.73  Aligned_cols=49  Identities=33%  Similarity=0.571  Sum_probs=40.2

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCCCccccccccccccCccccccc
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLI   65 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~   65 (159)
                      |+||+| .||++|.....|..|+.+|++++||.|++||+.|...+.|..|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H   49 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH   49 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHH
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHH
Confidence            578888 4888888888888888888888888888888888877777653

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5.6e-15  Score=68.88  Aligned_cols=35  Identities=31%  Similarity=0.741  Sum_probs=20.3

Q ss_pred             CCCccCcccccccCChHHHHHHHH-HccCCCCccCC
Q psy9695          75 MPKHLCHVCHKNFSSSSALQIHMR-THTGDKPFRCT  109 (159)
Q Consensus        75 ~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~C~  109 (159)
                      .+||.|..||+.|.....|..|++ +|++|+||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345666666666666666666643 46666666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.1e-15  Score=70.45  Aligned_cols=36  Identities=17%  Similarity=0.471  Sum_probs=23.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |+.+|++++||.|++||++|.+.++|..|+ ++|+|+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~-r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhC-ccCCCC
Confidence            455566666666666666666666666666 666653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9e-15  Score=65.59  Aligned_cols=33  Identities=33%  Similarity=0.768  Sum_probs=23.0

Q ss_pred             HccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          99 THTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +|++++||.|.+||++|.+.++|..|+ ++|.|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~-r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhc-cccCCC
Confidence            366777777777777777777777777 777653

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.6e-13  Score=63.15  Aligned_cols=38  Identities=24%  Similarity=0.465  Sum_probs=35.0

Q ss_pred             CCCCccCCcccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695         102 GDKPFRCTICQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus       102 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      .++||.|.+||++|...++|..|+.++|.++      +||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~e------kpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSE------RPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCC------CCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCC------cCcCCcC
Confidence            4799999999999999999999985689999      9999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.8e-14  Score=64.85  Aligned_cols=34  Identities=38%  Similarity=0.704  Sum_probs=25.2

Q ss_pred             HHccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695          98 RTHTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ++|+||+||.|.+||++|.+.+.|..|+ ++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~-r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHH-HHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhC-cccCCC
Confidence            3577777777777777777777777777 777654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=2.6e-14  Score=66.23  Aligned_cols=34  Identities=29%  Similarity=0.685  Sum_probs=25.1

Q ss_pred             HHHHccCCCCccCCcccccccccCCceeeehhhcc
Q psy9695          96 HMRTHTGDKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      |.+.|++|+||.|++|+++|.+.++|..|+ ++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~-r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHH-hcCc
Confidence            456677777777777777777777777777 6665

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.7e-14  Score=64.48  Aligned_cols=34  Identities=38%  Similarity=0.882  Sum_probs=26.7

Q ss_pred             HHccCCCCccCCcccccccccCCceeeehhhccC
Q psy9695          98 RTHTGDKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ++|+||+||.|++|+++|++.++|..|+++.|.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3588888888888888888888888888455543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=1.8e-13  Score=62.13  Aligned_cols=32  Identities=38%  Similarity=0.743  Sum_probs=24.2

Q ss_pred             ccCCCCccCCcccccccccCCceeeehhhccCC
Q psy9695         100 HTGDKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |+||+||+|++|++.|++.++|.+|+ ++|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~-r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHc-cccCCc
Confidence            56777888888888888888887777 777654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=2.4e-13  Score=58.43  Aligned_cols=28  Identities=32%  Similarity=0.799  Sum_probs=18.8

Q ss_pred             CCCccCCcccccccccCCceeeehhhccC
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      |+||+|++|+++|.+.+.|..|+ ++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             CcCccCCCCcCEecccccccccC-CCccC
Confidence            46677777777777777777676 66654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=9e-12  Score=55.61  Aligned_cols=32  Identities=44%  Similarity=0.596  Sum_probs=30.5

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      |++++||.|.+|++.|...+.|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            78999999999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1e-11  Score=57.67  Aligned_cols=36  Identities=39%  Similarity=0.603  Sum_probs=33.4

Q ss_pred             cccccCCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          68 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        68 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +...|++++||.|++||+.|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            456789999999999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=2.2e-12  Score=56.06  Aligned_cols=27  Identities=33%  Similarity=0.801  Sum_probs=13.3

Q ss_pred             CccCcccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ||.|++|++.|...+.|..|+++|+||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            444555555554444555555544444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.8e-11  Score=55.17  Aligned_cols=33  Identities=27%  Similarity=0.649  Sum_probs=27.0

Q ss_pred             ccCcc--cccccCChHHHHHHHHHccCCCCccCCc
Q psy9695          78 HLCHV--CHKNFSSSSALQIHMRTHTGDKPFRCTI  110 (159)
Q Consensus        78 ~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~  110 (159)
                      |.|+.  |++.|.....|..|+++|++++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56765  8888888888888888888888888863

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=4.5e-12  Score=54.94  Aligned_cols=27  Identities=22%  Similarity=0.456  Sum_probs=13.9

Q ss_pred             CccCCcccccccccCCceeeehhhccCC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ||.|++||++|.+.+.|..|+ ++|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~-r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHI-KTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHH-HGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhc-CccCCc
Confidence            455555555555555555555 555543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.6e-12  Score=53.79  Aligned_cols=25  Identities=36%  Similarity=0.798  Sum_probs=12.6

Q ss_pred             CCccCCcccccccccCCceeeehhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +||+|++||++|.+.+.|..|+ ++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq-riH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ-RIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHH
T ss_pred             CCccCCCCcCeeccCcccccCc-cCC
Confidence            3455555555555555555555 444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.06  E-value=1.2e-12  Score=63.55  Aligned_cols=38  Identities=21%  Similarity=0.530  Sum_probs=26.9

Q ss_pred             HHHHHHHccCCCCccCCc--ccccccccCCceeeehhhccCC
Q psy9695          93 LQIHMRTHTGDKPFRCTI--CQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus        93 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +..|+. |++++||.|++  |+++|.+.+.|..|+ ++|.|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~-r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHH-HHHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhc-ccccCC
Confidence            344553 77777777766  777777777777777 777765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=8.3e-11  Score=53.76  Aligned_cols=33  Identities=21%  Similarity=0.450  Sum_probs=30.7

Q ss_pred             ccCCCCCccCcccccccCChHHHHHHHHHccCC
Q psy9695          71 NVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        71 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      .|+|++||.|.+|++.|...+.|..|+++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            488999999999999999999999999999865

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=7e-11  Score=51.16  Aligned_cols=28  Identities=25%  Similarity=0.612  Sum_probs=27.0

Q ss_pred             CCccCCcccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +||.|++||++|.+.+.|..|+ ++|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSS
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccCC
Confidence            6999999999999999999999 999987

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1e-10  Score=50.54  Aligned_cols=29  Identities=38%  Similarity=0.654  Sum_probs=27.3

Q ss_pred             CCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      +||.|++|++.|...+.|..|+++|++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            48999999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=1.9e-10  Score=51.90  Aligned_cols=33  Identities=21%  Similarity=0.555  Sum_probs=30.2

Q ss_pred             cCCCCCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          72 VAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        72 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      ++|++||.|..|++.|...+.|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            578999999999999999999999999998653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.4e-10  Score=49.59  Aligned_cols=28  Identities=46%  Similarity=0.870  Sum_probs=26.3

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcC
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTG   43 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~   43 (159)
                      |+||+|++|+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=2.6e-10  Score=52.44  Aligned_cols=35  Identities=26%  Similarity=0.500  Sum_probs=31.3

Q ss_pred             cccccCCCCcccCcccccccCChHHHHHHHHhhcC
Q psy9695           9 AVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTG   43 (159)
Q Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~   43 (159)
                      +.+.|++++||+|++|+++|.....|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45789999999999999999999999999998853

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.9e-11  Score=52.62  Aligned_cols=26  Identities=35%  Similarity=0.777  Sum_probs=12.9

Q ss_pred             CccCCc--ccccccccCCceeeehhhccC
Q psy9695         105 PFRCTI--CQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       105 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      ||.|++  ||++|.+.+.|..|+ ++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~-r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHL-RSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHH-HHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhc-CcCcC
Confidence            445544  555555555555554 44444

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=5.2e-10  Score=50.96  Aligned_cols=33  Identities=21%  Similarity=0.494  Sum_probs=28.7

Q ss_pred             cccCCCCcccCcccccccCChHHHHHHHHhhcC
Q psy9695          11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTG   43 (159)
Q Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~   43 (159)
                      ++|+|++||+|++|+++|....+|..|+..+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            468999999999999999999999999865443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.2e-10  Score=47.28  Aligned_cols=26  Identities=42%  Similarity=0.579  Sum_probs=24.3

Q ss_pred             CCccCcccccccCChHHHHHHHHHcc
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTHT  101 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h~  101 (159)
                      +||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.6e-11  Score=54.78  Aligned_cols=33  Identities=27%  Similarity=0.509  Sum_probs=30.7

Q ss_pred             ccCCc--ccccccccCCceeeehhhccCCCCCcccccccchh
Q psy9695         106 FRCTI--CQKAFTTKGNLKVREIEINIGSQLPKKAQQHIGAV  145 (159)
Q Consensus       106 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~C~~  145 (159)
                      |.|++  ||++|.+.+.|..|+ ++|.++      +||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htge------kpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDT------RDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTS------CCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCC------CCEeCCC
Confidence            78887  999999999999999 999999      9999973

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.2e-11  Score=52.21  Aligned_cols=27  Identities=44%  Similarity=0.872  Sum_probs=14.1

Q ss_pred             CCccCCc--ccccccccCCceeeehhhccC
Q psy9695         104 KPFRCTI--CQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       104 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      +||.|++  ||++|+..+.|..|+ ++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccCC
Confidence            3455544  555555555555555 55544

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=2.5e-10  Score=50.33  Aligned_cols=29  Identities=28%  Similarity=0.636  Sum_probs=21.5

Q ss_pred             CCCccCCc--ccccccccCCceeeehhhccCC
Q psy9695         103 DKPFRCTI--CQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       103 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |+||.|++  |+++|++.+.|.+|+ ++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~-r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHK-KSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHH-GGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHh-hhccCC
Confidence            57777776  778887777777777 777653

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=8.7e-10  Score=53.27  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=36.0

Q ss_pred             CccCCccccccCCCCcccCcc--cccccCChHHHHHHHHhhcCCC
Q psy9695           3 GKLIPNAVFNVAGMPKHLCHV--CHKNFSSSSALQIHMRTHTGDK   45 (159)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~~~~h~~~~~~~~   45 (159)
                      .+.+.+++. +.+++||+|..  |+++|.....|..|+++|++++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345566664 99999999977  9999999999999999999874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.3e-10  Score=50.21  Aligned_cols=28  Identities=36%  Similarity=0.772  Sum_probs=14.3

Q ss_pred             CCccCC--cccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCT--ICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +||.|+  .||++|++.+.|..|+ ++|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-Cccccc
Confidence            345553  2555555555555555 555544

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=4.4e-09  Score=45.54  Aligned_cols=28  Identities=39%  Similarity=0.866  Sum_probs=26.2

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHccCC
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +||.|+.  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4899988  999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=6.6e-10  Score=47.27  Aligned_cols=26  Identities=31%  Similarity=0.673  Sum_probs=21.2

Q ss_pred             CCccCCc--ccccccccCCceeeehhhcc
Q psy9695         104 KPFRCTI--CQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       104 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  130 (159)
                      +||.|++  ||++|++.++|..|+ ++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~-r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHI-LTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHH-HHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHH-hhcc
Confidence            5788877  888888888888888 7764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=2.6e-10  Score=49.08  Aligned_cols=27  Identities=26%  Similarity=0.823  Sum_probs=17.4

Q ss_pred             CCccCCc--ccccccccCCceeeehhhccC
Q psy9695         104 KPFRCTI--CQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       104 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      +||.|++  |+++|+..+.|.+|+ ++|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~-r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHI-RIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHT-HHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhc-CccCC
Confidence            4666655  666666666666666 66654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=5.2e-09  Score=45.38  Aligned_cols=28  Identities=43%  Similarity=0.749  Sum_probs=25.9

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHccCC
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      +||.|+.  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4899987  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=9.5e-09  Score=44.92  Aligned_cols=29  Identities=48%  Similarity=0.839  Sum_probs=26.3

Q ss_pred             CCccCc--ccccccCChHHHHHHHHHccCCC
Q psy9695          76 PKHLCH--VCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        76 ~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      +||.|+  .|++.|...+.|..|+++|++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            479996  59999999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=3.7e-09  Score=41.91  Aligned_cols=26  Identities=35%  Similarity=0.815  Sum_probs=17.8

Q ss_pred             CccCCcccccccccCCceeeehhhccC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      |.+|++|++.|++...|..|+ +.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            456777777777777777777 66654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=5.6e-08  Score=41.59  Aligned_cols=27  Identities=44%  Similarity=0.803  Sum_probs=24.6

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHccC
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~  102 (159)
                      +||.|..  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4799987  99999999999999999975

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.36  E-value=2.1e-07  Score=40.69  Aligned_cols=29  Identities=24%  Similarity=0.418  Sum_probs=25.8

Q ss_pred             CCCccCcc--cccccCChHHHHHHHHHccCC
Q psy9695          75 MPKHLCHV--CHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        75 ~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ++||.|..  |++.|.....|..|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            46899988  999999999999999999753

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=2e-08  Score=41.12  Aligned_cols=25  Identities=36%  Similarity=0.798  Sum_probs=12.7

Q ss_pred             CCccCCcccccccccCCceeeehhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +||.|++||+.|.++.....|. ++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~-kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHT-KIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH-GGG
T ss_pred             CCcccchhhhhhhcchhhhhhh-hhc
Confidence            4555555555555555554444 443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.5e-07  Score=39.77  Aligned_cols=26  Identities=35%  Similarity=0.719  Sum_probs=23.3

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHcc
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTHT  101 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h~  101 (159)
                      +||.|+.  |++.|.....|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4799988  9999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.3e-07  Score=38.85  Aligned_cols=31  Identities=32%  Similarity=0.711  Sum_probs=27.0

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCCCcc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPFR  107 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~  107 (159)
                      ...|..||+.|.....|..|.-.|.+|+||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4678999999999999999999999999883

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.1e-07  Score=36.27  Aligned_cols=26  Identities=54%  Similarity=0.945  Sum_probs=23.5

Q ss_pred             cccCcccccccCChHHHHHHHHhhcC
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRTHTG   43 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~~~~   43 (159)
                      |++|+.|++.|..+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999998864

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=5.4e-08  Score=39.47  Aligned_cols=28  Identities=32%  Similarity=0.710  Sum_probs=17.6

Q ss_pred             CCCccCCcccccccccCCceeeehhhccC
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      |+||+|..|..+...++.|..|+ +.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhl-r~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHL-RSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CCcceeeecccccCCchheEEee-ecccC
Confidence            45666666666666666666666 66655

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.1e-08  Score=40.46  Aligned_cols=29  Identities=28%  Similarity=0.652  Sum_probs=20.8

Q ss_pred             CCCccCCcccccccccCCceeeehhhccCC
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      |+||.|++|+..|.+...+.-|. ++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhv-rshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHV-RSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHH-HHHSCC
T ss_pred             CCCcccchHHHHhhccccceEee-ecccCc
Confidence            46777777777777777777777 777664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.9e-07  Score=38.73  Aligned_cols=22  Identities=32%  Similarity=0.824  Sum_probs=14.6

Q ss_pred             CCccCCc--ccccccccCCceeee
Q psy9695         104 KPFRCTI--CQKAFTTKGNLKVRE  125 (159)
Q Consensus       104 ~~~~C~~--C~~~f~~~~~l~~H~  125 (159)
                      +||.|.+  |+++++..++|++|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~   24 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHV   24 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHH
Confidence            4666655  667777777777666

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=2.9e-07  Score=37.07  Aligned_cols=26  Identities=46%  Similarity=0.814  Sum_probs=16.1

Q ss_pred             ccCcccccccCChHHHHHHHHHccCC
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ..|.+||+.|...+.|.+|+-.|++|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35666666666666666666666553

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=2.1e-06  Score=34.55  Aligned_cols=27  Identities=30%  Similarity=0.556  Sum_probs=23.6

Q ss_pred             CccCCcccccccccCCceeeehhhccCC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ...|.+||++|..++.|.+|+ .+|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~-lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQ-LVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHG-GGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHh-hcccCC
Confidence            357999999999999999999 888874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=2.5e-06  Score=34.75  Aligned_cols=27  Identities=22%  Similarity=0.541  Sum_probs=23.9

Q ss_pred             CCCccCcccccccCChHHHHHHHHHcc
Q psy9695          75 MPKHLCHVCHKNFSSSSALQIHMRTHT  101 (159)
Q Consensus        75 ~~~~~C~~C~~~~~~~~~l~~H~~~h~  101 (159)
                      ++||.|..||+.|........|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            468999999999999999999998874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=4.4e-06  Score=33.92  Aligned_cols=27  Identities=33%  Similarity=0.571  Sum_probs=23.9

Q ss_pred             ccCcccccccCChHHHHHHHHHccCCC
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      |.|++|+..-.-++-|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999998888999999999998874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.3e-06  Score=34.88  Aligned_cols=29  Identities=28%  Similarity=0.583  Sum_probs=25.7

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++||.|+.|+..|..+..+..|++.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57899999999999999999999988653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.1e-06  Score=34.17  Aligned_cols=29  Identities=38%  Similarity=0.714  Sum_probs=25.8

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      ++||+|.+|...-++.+.|..|++.|+++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999999999999999999988764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=5.8e-07  Score=40.28  Aligned_cols=25  Identities=36%  Similarity=0.765  Sum_probs=21.3

Q ss_pred             cCCCCccCCcccccccccCCceeee
Q psy9695         101 TGDKPFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       101 ~~~~~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      +|.+||.|..|+|.|.+..++..|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            4678999999999999998888776

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.5e-06  Score=36.24  Aligned_cols=28  Identities=25%  Similarity=0.557  Sum_probs=23.7

Q ss_pred             CCccCCc--ccccccccCCceeeehhhccC
Q psy9695         104 KPFRCTI--CQKAFTTKGNLKVREIEINIG  131 (159)
Q Consensus       104 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  131 (159)
                      +||.|.+  |.|+|+..++-.+|+.++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899977  999999999999998788764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.3e-06  Score=35.34  Aligned_cols=32  Identities=31%  Similarity=0.682  Sum_probs=28.1

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCCCccc
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGDKPFR   48 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~   48 (159)
                      +...|..||+.|+....|..|...|.+++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34679999999999999999999999999873

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.74  E-value=1e-06  Score=36.80  Aligned_cols=28  Identities=32%  Similarity=0.739  Sum_probs=22.6

Q ss_pred             CccCCcccccccccCCceeeehhhccCC
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      ||.|.+|++.|+++..|-+|..+.|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6888888888888888888887777664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=3.9e-05  Score=31.08  Aligned_cols=26  Identities=35%  Similarity=0.558  Sum_probs=24.4

Q ss_pred             ccCcccccccCChHHHHHHHHhhcCC
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      |.|+.|+......+.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999876

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.58  E-value=3.4e-05  Score=34.19  Aligned_cols=28  Identities=36%  Similarity=0.687  Sum_probs=21.8

Q ss_pred             CccCcccccccCChHHHHHHHHHccCCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      .|+|..|++.|.+...|--|++.|..++
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcchH
Confidence            5788888888888888888888776554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=3.4e-06  Score=33.78  Aligned_cols=24  Identities=33%  Similarity=0.598  Sum_probs=12.9

Q ss_pred             CccCcccccccCChHHHHHHHHHc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      ||+|..|.......+.|..|.++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            455555555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=3.3e-06  Score=34.33  Aligned_cols=21  Identities=48%  Similarity=0.964  Sum_probs=12.3

Q ss_pred             CccCCcccccccccCCceeee
Q psy9695         105 PFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      ||.|..|+.+|....+|.+||
T Consensus         1 py~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhh
Confidence            455555665555555555555

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=4.1e-05  Score=30.57  Aligned_cols=26  Identities=31%  Similarity=0.563  Sum_probs=24.1

Q ss_pred             CcccCcccccccCChHHHHHHHHhhc
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      +||+|..|+.+....++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            58999999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=5.9e-05  Score=29.73  Aligned_cols=26  Identities=50%  Similarity=0.902  Sum_probs=21.9

Q ss_pred             cCcccccccCChHHHHHHHHHccCCC
Q psy9695          79 LCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        79 ~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      .|+.|.+.|.+...|..|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=9.2e-06  Score=33.13  Aligned_cols=26  Identities=19%  Similarity=0.374  Sum_probs=13.4

Q ss_pred             CccCCcccccccccCCceeeehhhcc
Q psy9695         105 PFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      ||.|.+|.......++|..|.+..|.
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            55555555555555555555533333

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.41  E-value=5.5e-05  Score=30.53  Aligned_cols=25  Identities=36%  Similarity=0.545  Sum_probs=19.9

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHc
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h  100 (159)
                      .||.|+.  |++.|..++.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3677775  888888888888888776

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=8.5e-05  Score=30.58  Aligned_cols=27  Identities=30%  Similarity=0.720  Sum_probs=23.1

Q ss_pred             CCccCcc--cccccCChHHHHHHHHHccC
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~  102 (159)
                      +||.|..  |++.+..++.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4788887  89999999999999997654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.9e-06  Score=33.90  Aligned_cols=26  Identities=23%  Similarity=0.554  Sum_probs=16.9

Q ss_pred             CCccCCcccccccccCCceeeehhhc
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEIN  129 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~h  129 (159)
                      +||+|+.|...-.+.++|..|+++.|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            46677777766667777777764443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=0.00013  Score=29.48  Aligned_cols=27  Identities=37%  Similarity=0.826  Sum_probs=20.1

Q ss_pred             CccCcccccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      .|.|..|-+.|...-.|..|+..|+||
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            477777777777777777777777764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.29  E-value=0.00013  Score=32.25  Aligned_cols=28  Identities=36%  Similarity=0.644  Sum_probs=24.8

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      +.|.|..|++.|.+...|--|+..|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4599999999999999999999988654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00016  Score=29.15  Aligned_cols=29  Identities=34%  Similarity=0.744  Sum_probs=25.5

Q ss_pred             CCcccCcccccccCChHHHHHHHHhhcCC
Q psy9695          16 MPKHLCHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        16 ~~~~~C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      +..|.|..|...|+...+|..|+-.|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999888764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.00019  Score=28.22  Aligned_cols=26  Identities=50%  Similarity=0.902  Sum_probs=23.4

Q ss_pred             cCcccccccCChHHHHHHHHhhcCCC
Q psy9695          20 LCHVCHKNFSSSSALQIHMRTHTGDK   45 (159)
Q Consensus        20 ~C~~C~~~f~~~~~~~~h~~~~~~~~   45 (159)
                      +|+.|.+.|.++.-|..|.+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999998874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=0.00013  Score=28.25  Aligned_cols=24  Identities=38%  Similarity=0.717  Sum_probs=20.9

Q ss_pred             ccCcccccccCChHHHHHHHHhhc
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      |+|..|.+.|-.++.+..|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999988774

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.14  E-value=0.0002  Score=27.71  Aligned_cols=23  Identities=39%  Similarity=0.746  Sum_probs=14.3

Q ss_pred             ccCcccccccCChHHHHHHHHHc
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      |+|-.|+++|...+.|..|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666655

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0002  Score=31.86  Aligned_cols=27  Identities=22%  Similarity=0.579  Sum_probs=21.4

Q ss_pred             CCCCCccCcccccccCChHHHHHHHHH
Q psy9695          73 AGMPKHLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        73 ~~~~~~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      +|.+||.|..|++.|.+...+..|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            356789999999999888888887653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00026  Score=28.56  Aligned_cols=24  Identities=25%  Similarity=0.577  Sum_probs=21.3

Q ss_pred             CccCcccccccCChHHHHHHHHHc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      ||.|..|..+|.+..+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            688999999999999999998864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.0006  Score=27.61  Aligned_cols=25  Identities=28%  Similarity=0.511  Sum_probs=21.2

Q ss_pred             CCccCcccccccCChHHHHHHHHHc
Q psy9695          76 PKHLCHVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        76 ~~~~C~~C~~~~~~~~~l~~H~~~h  100 (159)
                      +||.|..|+......++|..|.+.-
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            4789999998888888999998873

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=2.1e-05  Score=30.58  Aligned_cols=21  Identities=33%  Similarity=0.632  Sum_probs=12.4

Q ss_pred             CccCcccccccCChHHHHHHH
Q psy9695          77 KHLCHVCHKNFSSSSALQIHM   97 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~   97 (159)
                      ||+|..|...|.....|++|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            456666666666665665554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00065  Score=27.47  Aligned_cols=27  Identities=26%  Similarity=0.493  Sum_probs=22.6

Q ss_pred             CcccCcccccccCChHHHHHHHHhhcC
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHTG   43 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~~   43 (159)
                      +||+|..|.......++|..|+..-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            479999999999999999999875443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.46  E-value=0.001  Score=26.85  Aligned_cols=27  Identities=41%  Similarity=0.674  Sum_probs=17.5

Q ss_pred             CccCcc--cccccCChHHHHHHHHHccCC
Q psy9695          77 KHLCHV--CHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        77 ~~~C~~--C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      ||.|.+  |++.|.+...|.+|...|++|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455554  677777777777777666654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.0014  Score=28.65  Aligned_cols=26  Identities=27%  Similarity=0.593  Sum_probs=13.7

Q ss_pred             CCCccC--cccccccCChHHHHHHHHHc
Q psy9695          75 MPKHLC--HVCHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        75 ~~~~~C--~~C~~~~~~~~~l~~H~~~h  100 (159)
                      ++||.|  +.|+..|.+...|..|+..|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            445555  33555555555555555544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.40  E-value=0.0019  Score=25.51  Aligned_cols=23  Identities=22%  Similarity=0.316  Sum_probs=16.6

Q ss_pred             CccCcccccccCChHHHHHHHHH
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~   99 (159)
                      ||.|..||+-+-....|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            56777777777777777777653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.38  E-value=0.0013  Score=25.33  Aligned_cols=25  Identities=28%  Similarity=0.800  Sum_probs=19.7

Q ss_pred             CCccCCcccccccccCCceeeehhh
Q psy9695         104 KPFRCTICQKAFTTKGNLKVREIEI  128 (159)
Q Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~~  128 (159)
                      -||+|..|...|....+|..||.+.
T Consensus         1 mpykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhc
Confidence            0688999999999888888887443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.25  E-value=0.002  Score=25.83  Aligned_cols=25  Identities=36%  Similarity=0.545  Sum_probs=20.6

Q ss_pred             CcccCcc--cccccCChHHHHHHHHhh
Q psy9695          17 PKHLCHV--CHKNFSSSSALQIHMRTH   41 (159)
Q Consensus        17 ~~~~C~~--C~~~f~~~~~~~~h~~~~   41 (159)
                      .||+|+.  |++.|...+.|..|..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788875  889999999998887766

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.00087  Score=27.72  Aligned_cols=27  Identities=37%  Similarity=0.645  Sum_probs=19.4

Q ss_pred             CCccCcc--cccccCChHHHHHHH-HHccC
Q psy9695          76 PKHLCHV--CHKNFSSSSALQIHM-RTHTG  102 (159)
Q Consensus        76 ~~~~C~~--C~~~~~~~~~l~~H~-~~h~~  102 (159)
                      +||.|..  |.+.|...+.-..|+ +.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            3677776  888888877777776 55643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.11  E-value=0.0019  Score=26.66  Aligned_cols=23  Identities=22%  Similarity=0.521  Sum_probs=18.0

Q ss_pred             cccCcccccccCChHHHHHHHHh
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRT   40 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~   40 (159)
                      ||.|..|++.|.....+..|+..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            57788888888888888887754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.04  E-value=0.00018  Score=27.95  Aligned_cols=21  Identities=33%  Similarity=0.713  Sum_probs=12.4

Q ss_pred             ccCCcccccccccCCceeeeh
Q psy9695         106 FRCTICQKAFTTKGNLKVREI  126 (159)
Q Consensus       106 ~~C~~C~~~f~~~~~l~~H~~  126 (159)
                      |.|+.|=+.|++..++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            456666666666666655553

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0035  Score=27.40  Aligned_cols=27  Identities=26%  Similarity=0.570  Sum_probs=23.1

Q ss_pred             CCcccC--cccccccCChHHHHHHHHhhc
Q psy9695          16 MPKHLC--HVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        16 ~~~~~C--~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      ++||.|  +-|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            788999  569999999999999887764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.69  E-value=0.00066  Score=27.40  Aligned_cols=28  Identities=36%  Similarity=0.694  Sum_probs=22.9

Q ss_pred             CCccCCc--ccccccccCCceeeehhhccCC
Q psy9695         104 KPFRCTI--CQKAFTTKGNLKVREIEINIGS  132 (159)
Q Consensus       104 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  132 (159)
                      +||.|.+  |.+.|...-.|.+|. .+|.|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs-~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHS-LTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHH-HHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhh-ccccCC
Confidence            5778855  999999999999998 777764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.00044  Score=29.30  Aligned_cols=21  Identities=29%  Similarity=0.705  Sum_probs=16.8

Q ss_pred             CccCCcccccccccCCceeee
Q psy9695         105 PFRCTICQKAFTTKGNLKVRE  125 (159)
Q Consensus       105 ~~~C~~C~~~f~~~~~l~~H~  125 (159)
                      .|.|..||+.|+++..+.+|.
T Consensus         4 afvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHh
Confidence            477888888888888877776

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0065  Score=25.59  Aligned_cols=26  Identities=23%  Similarity=0.589  Sum_probs=22.9

Q ss_pred             CccCcccccccCChHHHHHHHHHccC
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~~  102 (159)
                      .|+|..|++.|.....+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999999887665

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.00043  Score=27.50  Aligned_cols=21  Identities=29%  Similarity=0.630  Sum_probs=11.4

Q ss_pred             ccCcccccccCChHHHHHHHH
Q psy9695          78 HLCHVCHKNFSSSSALQIHMR   98 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~   98 (159)
                      |.|+.|+......+.|..|.+
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            455555555555555555544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0083  Score=23.76  Aligned_cols=25  Identities=40%  Similarity=0.634  Sum_probs=17.9

Q ss_pred             CccCcccccccCChHHHHHHHHHcc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHT  101 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~  101 (159)
                      |-+|++|..+-.+...|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3467777777777777777777764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.0061  Score=30.25  Aligned_cols=47  Identities=21%  Similarity=0.457  Sum_probs=27.9

Q ss_pred             CccccccCCCCcccCcccccccCChHHHHHHHHhhcCCCccccccccccc
Q psy9695           7 PNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAF   56 (159)
Q Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~~~~~~~c~~c~~~~   56 (159)
                      ....++...-..|+|+.|++.|..   |..-+..-.....|.|..|+...
T Consensus         3 e~~~rd~~~~~~y~Cp~C~~~ys~---Lda~~L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_           3 ETDERDSTNRASFKCPVCSSTFTD---LEANQLFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEH---HHHHHHEETTTTEEBCSSSCCBC
T ss_pred             chhhhccccCCceECCCCCCCcch---hhHHHhcCcCCCeEEecCCCCEE
Confidence            334455556667888888887743   33333334444567887776543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0049  Score=26.28  Aligned_cols=24  Identities=38%  Similarity=0.697  Sum_probs=19.4

Q ss_pred             CcccccccCChHHHHHHHHHccCC
Q psy9695          80 CHVCHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        80 C~~C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      |+.=++.|.....|..|++.|++|
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456789999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.31  E-value=0.0071  Score=23.29  Aligned_cols=22  Identities=23%  Similarity=0.634  Sum_probs=19.9

Q ss_pred             ccCcccccccCChHHHHHHHHh
Q psy9695          19 HLCHVCHKNFSSSSALQIHMRT   40 (159)
Q Consensus        19 ~~C~~C~~~f~~~~~~~~h~~~   40 (159)
                      |.|+.|-+.|..+.++..|+.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6899999999999999999865

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0091  Score=23.65  Aligned_cols=25  Identities=40%  Similarity=0.634  Sum_probs=21.7

Q ss_pred             cccCcccccccCChHHHHHHHHhhc
Q psy9695          18 KHLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        18 ~~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      |-+|+.|.....++..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4589999999999999999988874

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.02  Score=22.95  Aligned_cols=25  Identities=24%  Similarity=0.574  Sum_probs=19.5

Q ss_pred             ccCcccccccCChHHHHHHHHHccC
Q psy9695          78 HLCHVCHKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        78 ~~C~~C~~~~~~~~~l~~H~~~h~~  102 (159)
                      |.|..||+...+...+.-|....+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            7888888888888888888766543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.0095  Score=27.33  Aligned_cols=26  Identities=27%  Similarity=0.480  Sum_probs=23.1

Q ss_pred             CcccCcccccccCChHHHHHHHHhhc
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      -.|.|-.|++.|.....|.+|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999988775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.42  E-value=0.017  Score=26.50  Aligned_cols=25  Identities=28%  Similarity=0.521  Sum_probs=20.7

Q ss_pred             CccCcccccccCChHHHHHHHHHcc
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMRTHT  101 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~~h~  101 (159)
                      .|.|-.|++.|.....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778889999988888888888775

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=94.02  E-value=0.012  Score=25.78  Aligned_cols=9  Identities=44%  Similarity=0.859  Sum_probs=5.0

Q ss_pred             CCccCCccc
Q psy9695         104 KPFRCTICQ  112 (159)
Q Consensus       104 ~~~~C~~C~  112 (159)
                      +.|.|.+||
T Consensus         4 ~~~vC~vCG   12 (36)
T d1yuza2           4 KFHLCPICG   12 (36)
T ss_dssp             CEEECSSSC
T ss_pred             CEEECCCCC
Confidence            345566666

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.96  E-value=0.014  Score=24.28  Aligned_cols=23  Identities=35%  Similarity=0.654  Sum_probs=20.5

Q ss_pred             CcccCcccccccCChHHHHHHHH
Q psy9695          17 PKHLCHVCHKNFSSSSALQIHMR   39 (159)
Q Consensus        17 ~~~~C~~C~~~f~~~~~~~~h~~   39 (159)
                      ..|.|+-||..|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35899999999999999999975

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.32  E-value=0.002  Score=27.34  Aligned_cols=28  Identities=18%  Similarity=0.562  Sum_probs=18.8

Q ss_pred             CCCccCCcccccccccCCceeeehhhcc
Q psy9695         103 DKPFRCTICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      +..|+|.+|.+.++..+++-+|...+|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            4457777777777777777777644443

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.21  E-value=0.021  Score=25.12  Aligned_cols=8  Identities=38%  Similarity=1.123  Sum_probs=4.5

Q ss_pred             CccCCccc
Q psy9695         105 PFRCTICQ  112 (159)
Q Consensus       105 ~~~C~~C~  112 (159)
                      .|.|.+||
T Consensus         5 ~~~C~vCG   12 (37)
T d1nnqa2           5 VYICPICG   12 (37)
T ss_dssp             EEECTTTC
T ss_pred             EEECCCCC
Confidence            35566665

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.92  E-value=0.03  Score=23.75  Aligned_cols=24  Identities=38%  Similarity=0.697  Sum_probs=19.5

Q ss_pred             CcccccccCChHHHHHHHHhhcCC
Q psy9695          21 CHVCHKNFSSSSALQIHMRTHTGD   44 (159)
Q Consensus        21 C~~C~~~f~~~~~~~~h~~~~~~~   44 (159)
                      |+--++.|.....|..|++.|+++
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444457799999999999999875

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.56  E-value=0.17  Score=22.99  Aligned_cols=33  Identities=15%  Similarity=0.244  Sum_probs=24.0

Q ss_pred             ccccCCCCcccCcccccccCChHHHHHHHHhhc
Q psy9695          10 VFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      ....-.+.|-.|+.|+-..+..-+|..|+...+
T Consensus        16 ksrs~s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          16 RSRSQSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TTTTTTSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccccccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            333445667788888888888888888886543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.35  E-value=0.14  Score=23.20  Aligned_cols=31  Identities=19%  Similarity=0.296  Sum_probs=22.1

Q ss_pred             CCCCccCcccccccCChHHHHHHHHHccCCC
Q psy9695          74 GMPKHLCHVCHKNFSSSSALQIHMRTHTGDK  104 (159)
Q Consensus        74 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  104 (159)
                      .+.|-.|+.|+.......+|..|....+-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            3456788888888888888888877644333

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.32  E-value=0.11  Score=20.46  Aligned_cols=20  Identities=40%  Similarity=0.679  Sum_probs=17.5

Q ss_pred             ccccccCChHHHHHHHHhhc
Q psy9695          23 VCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        23 ~C~~~f~~~~~~~~h~~~~~   42 (159)
                      -|.+.|+..+.+..|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48899999999999998874

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.09  E-value=0.11  Score=20.19  Aligned_cols=18  Identities=33%  Similarity=0.715  Sum_probs=9.4

Q ss_pred             cccccCChHHHHHHHHHc
Q psy9695          83 CHKNFSSSSALQIHMRTH  100 (159)
Q Consensus        83 C~~~~~~~~~l~~H~~~h  100 (159)
                      |++.|.....|..|+-.|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555444

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=89.04  E-value=0.04  Score=24.17  Aligned_cols=10  Identities=0%  Similarity=-0.197  Sum_probs=4.6

Q ss_pred             ccCCcccccc
Q psy9695         106 FRCTICQKAF  115 (159)
Q Consensus       106 ~~C~~C~~~f  115 (159)
                      -.|+.||..+
T Consensus        23 g~CD~cg~~L   32 (37)
T d2ak3a2          23 GIDDLTGEPL   32 (37)
T ss_dssp             TBCTTTCCBC
T ss_pred             CCccCCCCcC
Confidence            3455555433

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.27  E-value=0.28  Score=19.78  Aligned_cols=21  Identities=33%  Similarity=0.716  Sum_probs=12.5

Q ss_pred             cccccCChHHHHHHHHHccCC
Q psy9695          83 CHKNFSSSSALQIHMRTHTGD  103 (159)
Q Consensus        83 C~~~~~~~~~l~~H~~~h~~~  103 (159)
                      |+-.|.....|..|.-.|+||
T Consensus        11 C~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHCC
T ss_pred             cchhhccchhhhHHhhhhcCC
Confidence            555665556666666666553

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=88.02  E-value=0.19  Score=23.84  Aligned_cols=11  Identities=27%  Similarity=0.676  Sum_probs=5.8

Q ss_pred             ccCcccccccC
Q psy9695          78 HLCHVCHKNFS   88 (159)
Q Consensus        78 ~~C~~C~~~~~   88 (159)
                      |.|..||..|.
T Consensus         4 y~C~~CgyiYd   14 (53)
T d1iroa_           4 YTCTVCGYIYN   14 (53)
T ss_dssp             EEETTTCCEEC
T ss_pred             eEcCCCCcEEC
Confidence            55555555543

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.93  E-value=0.024  Score=22.65  Aligned_cols=25  Identities=36%  Similarity=0.547  Sum_probs=14.8

Q ss_pred             ccCC--cccccccccCCceeeehhhcc
Q psy9695         106 FRCT--ICQKAFTTKGNLKVREIEINI  130 (159)
Q Consensus       106 ~~C~--~C~~~f~~~~~l~~H~~~~h~  130 (159)
                      |.|+  .|+..|+...++.+|..+.|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhcc
Confidence            4453  366666666666666655543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.53  Score=22.94  Aligned_cols=28  Identities=21%  Similarity=0.484  Sum_probs=23.8

Q ss_pred             CCCcccCcccccccCChHHHHHHHHhhc
Q psy9695          15 GMPKHLCHVCHKNFSSSSALQIHMRTHT   42 (159)
Q Consensus        15 ~~~~~~C~~C~~~f~~~~~~~~h~~~~~   42 (159)
                      ...-|+|..|+..|-+...|..|+..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            3455999999999999999999988774

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.89  E-value=0.079  Score=26.56  Aligned_cols=22  Identities=36%  Similarity=0.753  Sum_probs=18.2

Q ss_pred             CccCcccccccCChHHHHHHHH
Q psy9695          77 KHLCHVCHKNFSSSSALQIHMR   98 (159)
Q Consensus        77 ~~~C~~C~~~~~~~~~l~~H~~   98 (159)
                      .|-|..|++.|.+...|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            4788888888888888888866

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.72  E-value=0.26  Score=19.46  Aligned_cols=19  Identities=26%  Similarity=0.377  Sum_probs=15.6

Q ss_pred             cccccccCChHHHHHHHHH
Q psy9695          81 HVCHKNFSSSSALQIHMRT   99 (159)
Q Consensus        81 ~~C~~~~~~~~~l~~H~~~   99 (159)
                      +.|++.|.+...|..|++-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4599999999988888764

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.25  E-value=0.12  Score=22.68  Aligned_cols=11  Identities=9%  Similarity=0.253  Sum_probs=5.4

Q ss_pred             ccCCccccccc
Q psy9695         106 FRCTICQKAFT  116 (159)
Q Consensus       106 ~~C~~C~~~f~  116 (159)
                      -.|+.||..+.
T Consensus        23 g~CD~cg~~L~   33 (38)
T d1akya2          23 MKDDVTGEALV   33 (38)
T ss_dssp             TBCTTTCCBCB
T ss_pred             CccCCCCCEee
Confidence            35555554443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.99  E-value=0.1  Score=26.15  Aligned_cols=29  Identities=31%  Similarity=0.655  Sum_probs=23.4

Q ss_pred             ccCCCCcccCcccccccCChHHHHHHHHh
Q psy9695          12 NVAGMPKHLCHVCHKNFSSSSALQIHMRT   40 (159)
Q Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~~~~h~~~   40 (159)
                      +.+|.-.|-|..|++.|.+...+.+|...
T Consensus         9 D~pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1           9 DLPGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCCCEEecccccCccCCHHHHHHHHcc
Confidence            34455568999999999999999999753

>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio gigas [TaxId: 879]

Probab=85.40  E-value=0.21  Score=23.58  Aligned_cols=11  Identities=27%  Similarity=0.869  Sum_probs=6.3

Q ss_pred             ccCcccccccC
Q psy9695          78 HLCHVCHKNFS   88 (159)
Q Consensus        78 ~~C~~C~~~~~   88 (159)
                      |.|..|+..+.
T Consensus         4 y~C~~CgyiYd   14 (52)
T d2dsxa1           4 YVCTVCGYEYD   14 (52)
T ss_dssp             EEETTTCCEEC
T ss_pred             EEeCCCCeEEC
Confidence            55666665553

>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.58  E-value=0.28  Score=23.19  Aligned_cols=10  Identities=20%  Similarity=0.883  Sum_probs=4.9

Q ss_pred             ccCccccccc
Q psy9695          78 HLCHVCHKNF   87 (159)
Q Consensus        78 ~~C~~C~~~~   87 (159)
                      |.|..|+..+
T Consensus         3 y~C~~CgyiY   12 (53)
T d1brfa_           3 WVCKICGYIY   12 (53)
T ss_dssp             EEETTTCCEE
T ss_pred             eECCCCCcEE
Confidence            4455555444

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=83.86  E-value=0.27  Score=22.40  Aligned_cols=13  Identities=31%  Similarity=0.866  Sum_probs=7.7

Q ss_pred             CccCcccccccCC
Q psy9695          77 KHLCHVCHKNFSS   89 (159)
Q Consensus        77 ~~~C~~C~~~~~~   89 (159)
                      .|.|..|+.++..
T Consensus         3 ~y~C~~CgyiYd~   15 (45)
T d6rxna_           3 KYVCNVCGYEYDP   15 (45)
T ss_dssp             CEEETTTCCEECG
T ss_pred             CeEeCCCCeEECc
Confidence            3666666666543

>d1qypa_ g.41.3.1 (A:) RBP9 subunit of RNA polymerase II {Archaeon Thermococcus celer [TaxId: 2264]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: RBP9 subunit of RNA polymerase II
species: Archaeon Thermococcus celer [TaxId: 2264]

Probab=83.37  E-value=0.05  Score=26.39  Aligned_cols=13  Identities=8%  Similarity=-0.026  Sum_probs=6.6

Q ss_pred             ccccchhhchhhh
Q psy9695         139 QQHIGAVEGKSFQ  151 (159)
Q Consensus       139 ~~~~C~~C~~~f~  151 (159)
                      ..|.|..|+..|.
T Consensus        42 ~fy~C~~Cg~~wr   54 (57)
T d1qypa_          42 IFYKCTKCGHTWR   54 (57)
T ss_dssp             EEEEESSSCCEEE
T ss_pred             EEEEeCCCCCcce
Confidence            4555555555443

>d1tfia_ g.41.3.1 (A:) Transcriptional factor SII, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcriptional factor SII, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.40  E-value=0.061  Score=25.29  Aligned_cols=12  Identities=8%  Similarity=0.061  Sum_probs=6.8

Q ss_pred             ccccchhhchhh
Q psy9695         139 QQHIGAVEGKSF  150 (159)
Q Consensus       139 ~~~~C~~C~~~f  150 (159)
                      ..|.|..|+..+
T Consensus        36 ~F~~C~~Cg~~W   47 (50)
T d1tfia_          36 TFVVCNECGNRW   47 (50)
T ss_dssp             EEEEESSSCCEE
T ss_pred             EEEEccccCCee
Confidence            456666666543

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=82.05  E-value=0.24  Score=23.74  Aligned_cols=10  Identities=20%  Similarity=0.810  Sum_probs=5.2

Q ss_pred             ccCccccccc
Q psy9695          78 HLCHVCHKNF   87 (159)
Q Consensus        78 ~~C~~C~~~~   87 (159)
                      |.|..||..+
T Consensus         5 y~C~~CgyiY   14 (56)
T d1s24a_           5 WICITCGHIY   14 (56)
T ss_dssp             EEETTTTEEE
T ss_pred             EECCCCCcEE
Confidence            5555555444

>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L37ae
domain: Ribosomal protein L37ae
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=81.90  E-value=0.13  Score=26.10  Aligned_cols=11  Identities=9%  Similarity=-0.031  Sum_probs=5.6

Q ss_pred             cccchhhchhh
Q psy9695         140 QHIGAVEGKSF  150 (159)
Q Consensus       140 ~~~C~~C~~~f  150 (159)
                      .+.|..|++.|
T Consensus        45 IW~C~kC~~~~   55 (73)
T d1jj2y_          45 IWMCGHCGYKI   55 (73)
T ss_dssp             EEEETTTCCEE
T ss_pred             EEECCCCCCEE
Confidence            35555555544

>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L37ae
domain: Ribosomal protein L37ae
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=81.77  E-value=0.13  Score=26.07  Aligned_cols=11  Identities=9%  Similarity=-0.133  Sum_probs=5.6

Q ss_pred             cccchhhchhh
Q psy9695         140 QHIGAVEGKSF  150 (159)
Q Consensus       140 ~~~C~~C~~~f  150 (159)
                      .+.|..|++.|
T Consensus        45 IW~C~kC~~~~   55 (73)
T d1vqoz1          45 IWQCSYCDYKF   55 (73)
T ss_dssp             EEEETTTCCEE
T ss_pred             EEECCCCCCEE
Confidence            35555555544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.00  E-value=0.77  Score=22.34  Aligned_cols=29  Identities=21%  Similarity=0.458  Sum_probs=24.3

Q ss_pred             CCCCccCcccccccCChHHHHHHHHHccC
Q psy9695          74 GMPKHLCHVCHKNFSSSSALQIHMRTHTG  102 (159)
Q Consensus        74 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~  102 (159)
                      +...|.|..|+..|.+...|..|...|..
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34569999999999999999999888764