Psyllid ID: psy9697

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MAWFHSVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccHHcccccccccccccHHccccHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccEEcccEEEcccccHHHHHccHHHHHHHHHHHccccccEEEccc
Coil and Loop (DISEMBL)
mawfhsvnRERAVQMVAAGGegcflvrpssssepltltlwyggraynifirkrddnkiglgtfkpnevmaaredatnhprdshpcrtqprcvitsrprgVVLRWRLSRIMFRHLADYNKLSGVQRAMW
Flexible Loop (DISEMBL)
mawfhsvnrERAVQMVAAGGEGCFlvrpsssseplTLTLWYGGRAYNIfirkrddnkiglgTFKPNEVMAAREdatnhprdshpcrtqprcvitsrprgvVLRWRLSRImfrhladynklsgvqramw
Low Complexity Region (SEG)
MAWFHSVNRERAVQMVAAGGEGCFLVRPssssEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW
Disordered region (IsUnstruct)
***FHSVNRERAVQMVAAGGEGCFLVRP****EPLTLTLWYGGRAYNIFIRKRDDNKIGLGTF**************************RCVITSRPRGVVLRWRLSRIMFRHLADYNKL********
Disordered Region (DISOPRED)
*AW****NRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIG*GTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW
Disordered Region (DISEMBL)
MAWFHSVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTFKPNEVMAAR*************RTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW
Disordered Region (DISPRO)
*AWFHSVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRA**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAWFHSVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	128	2.2.26 [Sep-21-2011]
Q6B860	128	28S ribosomal protein S14	yes	N/A	0.578	0.578	0.5	2e-16
O60783	128	28S ribosomal protein S14	yes	N/A	0.578	0.578	0.5	5e-16
Q9CR88	128	28S ribosomal protein S14	yes	N/A	0.578	0.578	0.5	2e-15
A7Z2Q4	89	30S ribosomal protein S14	yes	N/A	0.437	0.629	0.464	1e-08
B3EP48	89	30S ribosomal protein S14	yes	N/A	0.437	0.629	0.482	3e-08
O31587	89	Alternate 30S ribosomal p	yes	N/A	0.437	0.629	0.428	9e-08
Q2GEC6	101	30S ribosomal protein S14	yes	N/A	0.554	0.702	0.394	1e-07
P24354	100	Plastid 30S ribosomal pro	N/A	N/A	0.585	0.75	0.375	1e-07
Q65M53	89	30S ribosomal protein S14	yes	N/A	0.390	0.561	0.46	2e-07
Q5WAR0	89	30S ribosomal protein S14	yes	N/A	0.390	0.561	0.52	2e-07

>sp|Q6B860|RT14_BOVIN 28S ribosomal protein S14, mitochondrial OS=Bos taurus GN=MRPS14 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRINSLRKNTILPKHLQEVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSG+QRA+W
Sbjct: 109 IVFRHLADHGQLSGIQRAIW 128

Bos taurus (taxid: 9913)

>sp|O60783|RT14_HUMAN 28S ribosomal protein S14, mitochondrial OS=Homo sapiens GN=MRPS14 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRINSLRKNTILPKILQDVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSG+QRA W
Sbjct: 109 IVFRHLADHGQLSGIQRATW 128

Homo sapiens (taxid: 9606)

>sp|Q9CR88|RT14_MOUSE 28S ribosomal protein S14, mitochondrial OS=Mus musculus GN=Mrps14 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A ++    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRINSLRKNTILPKDLQEMAGDEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+  LSGVQRA+W
Sbjct: 109 IVFRHLADHGLLSGVQRAIW 128

Mus musculus (taxid: 10090)

>sp|A7Z2Q4|RS14_BACA2 30S ribosomal protein S14 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rpsN PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%)

Query: 73  EDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           E  +  PRDS P R   RC +T RPRG + +++LSRI FR LA   ++ GV++A W
Sbjct: 34  EALSKLPRDSAPARLHNRCTVTGRPRGYMRKFKLSRIAFRELAHKGRIPGVKKASW 89

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.

Bacillus amyloliquefaciens (strain FZB42) (taxid: 326423)

>sp|B3EP48|RS14_CHLPB 30S ribosomal protein S14 OS=Chlorobium phaeobacteroides (strain BS1) GN=rpsN PE=3 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query: 73  EDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           E  +  PRDS  CR + RCV+T R RGV  ++ L R MFR LA   KL G+++A W
Sbjct: 34  EALSKLPRDSASCRVRTRCVLTGRGRGVYEKFGLCRQMFRKLALEGKLPGIKKASW 89

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.

Chlorobium phaeobacteroides (strain BS1) (taxid: 331678)

>sp|O31587|RS14B_BACSU Alternate 30S ribosomal protein S14 OS=Bacillus subtilis (strain 168) GN=rpsN2 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 36/56 (64%)

Query: 73  EDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           E  +  PRDS P R   RC++T RPR  + ++++SRI FR LA   ++ GV++A W
Sbjct: 34  EALSKLPRDSAPGRLHNRCMVTGRPRAYMRKFKMSRIAFRELAHKGQIPGVKKASW 89

Non-essential protein. A second form of S14, it can integrate into the 30S subunit where it partially compensates for loss of the major S14 protein (AC P12878) in restoring 70S formation, although it does not seem to be incorporated into the ribosome as well as the major S14.

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q2GEC6|RS14_NEOSM 30S ribosomal protein S14 OS=Neorickettsia sennetsu (strain Miyayama) GN=rpsN PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)

Query: 53  RDDNKIGLGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFR 112
           R+D  I L      E +A +    + PR+S P R++ RC IT RPRG   ++ +SRI  R
Sbjct: 31  RNDKTISL-----KERVAIQAKLNSLPRNSSPARSKNRCSITGRPRGYYRKFGISRIQLR 85

Query: 113 HLADYNKLSGVQRAMW 128
            LA++ KL GV ++ W
Sbjct: 86  VLANWGKLPGVVKSSW 101

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.

Neorickettsia sennetsu (strain Miyayama) (taxid: 222891)

>sp|P24354|RR14_ASTLO Plastid 30S ribosomal protein S14 OS=Astasia longa GN=rps14 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 49  FIRKRDDNKIGLGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           FI+K   N++        E +         PRDS PCR   RC +T RPRG    + LSR
Sbjct: 26  FIKKEIKNELNFF-----EKIFLNFKLQKFPRDSSPCRLHNRCYLTGRPRGYYRFFGLSR 80

Query: 109 IMFRHLADYNKLSGVQRAMW 128
            +FR +A Y  L GV ++ W
Sbjct: 81  HIFRDMAHYGLLPGVTKSSW 100

Binds 16S rRNA, required for the assembly of 30S particles.

Astasia longa (taxid: 3037)

>sp|Q65M53|RS14_BACLD 30S ribosomal protein S14 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rpsN PE=3 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%)

Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PRDS P R   RC +T RPRG + ++++SRI FR LA   ++ GV+++ W
Sbjct: 40  PRDSAPARLHNRCEVTGRPRGYMRKFKMSRIAFRELAYKGQIPGVKKSSW 89

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.

Bacillus licheniformis (strain DSM 13 / ATCC 14580) (taxid: 279010)

>sp|Q5WAR0|RS14_BACSK 30S ribosomal protein S14 OS=Bacillus clausii (strain KSM-K16) GN=rpsN PE=3 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%)

Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PRDS P R   RC  T RPRGV+  + LSRI FR LA   ++ GV++A W
Sbjct: 40  PRDSAPSRLTRRCRKTGRPRGVLRDFELSRIAFRELAHKGQIPGVKKASW 89

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.

Bacillus clausii (strain KSM-K16) (taxid: 66692)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
327270233	160	PREDICTED: 28S ribosomal protein S14, mi	0.578	0.462	0.537	5e-16
225716046	139	Mitochondrial 28S ribosomal protein S14	0.570	0.525	0.594	5e-16
350589017	132	PREDICTED: 28S ribosomal protein S14, mi	0.578	0.560	0.525	2e-15
291397270	128	PREDICTED: mitochondrial ribosomal prote	0.570	0.570	0.594	3e-15
149707900	128	PREDICTED: 28S ribosomal protein S14, mi	0.578	0.578	0.525	3e-15
126306263	128	PREDICTED: 28S ribosomal protein S14, mi	0.578	0.578	0.525	3e-15
403266445	128	PREDICTED: 28S ribosomal protein S14, mi	0.578	0.578	0.525	4e-15
296229727	128	PREDICTED: 28S ribosomal protein S14, mi	0.578	0.578	0.525	4e-15
351696813	128	28S ribosomal protein S14, mitochondrial	0.578	0.578	0.525	4e-15
270008302	129	hypothetical protein TcasGA2_TC030556 [T	0.390	0.387	0.78	4e-15

>gi|327270233|ref|XP_003219894.1| PREDICTED: 28S ribosomal protein S14, mitochondrial-like [Anolis carolinensis]

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ L   + N+++       A ++    PRDS P R + RCV+TSRPRGVV RWRLSR
Sbjct: 81  DQRLRLDALRKNKILPKELREVASQEIAALPRDSCPVRIRNRCVLTSRPRGVVWRWRLSR 140

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 141 IVFRHLADHAQLSGVQRAMW 160

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|225716046|gb|ACO13869.1| Mitochondrial 28S ribosomal protein S14 [Esox lucius]

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 56  NKIGLGTFKPNEVMA-AREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
           N +   T  P E+ A A E+  + PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct: 66  NALRKNTVLPKELQAVADEEIASLPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 125

Query: 115 ADYNKLSGVQRAMW 128
           AD+N++SG+QRAMW
Sbjct: 126 ADHNQMSGIQRAMW 139

Source: Esox lucius

Species: Esox lucius

Genus: Esox

Family: Esocidae

Order: Esociformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350589017|ref|XP_003482769.1| PREDICTED: 28S ribosomal protein S14, mitochondrial-like [Sus scrofa]

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+  + PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 34  DERLRINSLRKNTILPKDLQEVADEEIASLPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 93

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 94  IVFRHLADHGQLSGVQRAMW 113

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291397270|ref|XP_002715046.1| PREDICTED: mitochondrial ribosomal protein S14-like [Oryctolagus cuniculus]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 1/74 (1%)

Query: 56  NKIGLGTFKPNEVMA-AREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
           N +   T  P ++ A A E+    PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct: 55  NSLRKNTILPKDLQAVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query: 115 ADYNKLSGVQRAMW 128
           AD+ +LSGVQRAMW
Sbjct: 115 ADHGQLSGVQRAMW 128

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|149707900|ref|XP_001497831.1| PREDICTED: 28S ribosomal protein S14, mitochondrial-like [Equus caballus]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRINSLRKNTILPKDLQDVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 109 IVFRHLADHGQLSGVQRAMW 128

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|126306263|ref|XP_001365530.1| PREDICTED: 28S ribosomal protein S14, mitochondrial-like [Monodelphis domestica]

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N V+       A ++  + PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRINSLRKNTVLPKDLQEVADQEIASLPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 109 IVFRHLADHGQLSGVQRAMW 128

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403266445|ref|XP_003925393.1| PREDICTED: 28S ribosomal protein S14, mitochondrial [Saimiri boliviensis boliviensis]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRVNSLRKNTILPKLLQDVADEEIAAFPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 109 IVFRHLADHGQLSGVQRAMW 128

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|296229727|ref|XP_002760443.1| PREDICTED: 28S ribosomal protein S14, mitochondrial [Callithrix jacchus]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRVNSLRKNTILPKLLQDVADEEIAAFPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 109 IVFRHLADHGQLSGVQRAMW 128

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351696813|gb|EHA99731.1| 28S ribosomal protein S14, mitochondrial [Heterocephalus glaber]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 6/80 (7%)

Query: 55  DNKIGLGTFKPNEVM------AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSR 108
           D ++ + + + N ++       A E+    PRDS P R + RCV+TSRPRGV  RWRLSR
Sbjct: 49  DERLRINSLRKNTILPRDLQEVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSR 108

Query: 109 IMFRHLADYNKLSGVQRAMW 128
           I+FRHLAD+ +LSGVQRAMW
Sbjct: 109 IVFRHLADHGQLSGVQRAMW 128

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|270008302|gb|EFA04750.1| hypothetical protein TcasGA2_TC030556 [Tribolium castaneum]

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 43/50 (86%)

Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           P +S P R   RCV+TSRPRGVV RWR+SRI+FRHLADYNKLSGVQRAMW
Sbjct: 80  PLNSTPLRINKRCVVTSRPRGVVNRWRVSRIVFRHLADYNKLSGVQRAMW 129

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
UNIPROTKB|F1S721	128	MRPS14 "Uncharacterized protei	0.570	0.570	0.581	9.5e-18
UNIPROTKB|I3L904	128	MRPS14 "Uncharacterized protei	0.570	0.570	0.581	9.5e-18
UNIPROTKB|E1BQP4	126	MRPS14 "Uncharacterized protei	0.562	0.571	0.586	1.1e-16
UNIPROTKB|Q6B860	128	MRPS14 "28S ribosomal protein	0.570	0.570	0.554	1.1e-16
UNIPROTKB|E2RMB2	128	MRPS14 "Uncharacterized protei	0.570	0.570	0.540	2.9e-16
MGI|MGI:1928141	128	Mrps14 "mitochondrial ribosoma	0.570	0.570	0.554	2.9e-16
RGD|1309432	128	Mrps14 "mitochondrial ribosoma	0.570	0.570	0.554	2.9e-16
ZFIN|ZDB-GENE-060825-75	138	mrps14 "mitochondrial ribosoma	0.570	0.528	0.554	2.9e-16
UNIPROTKB|O60783	128	MRPS14 "28S ribosomal protein	0.570	0.570	0.554	3.7e-16
FB|FBgn0044030	128	mRpS14 "mitochondrial ribosoma	0.570	0.570	0.554	9.8e-16

UNIPROTKB|F1S721 MRPS14 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/74 (58%), Positives = 53/74 (71%)

Query:    56 NKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P ++   A E+  + PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKDLQEVADEEIASLPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+ +LSGVQRAMW
Sbjct:   115 ADHGQLSGVQRAMW 128

GO:0006412 "translation" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

UNIPROTKB|I3L904 MRPS14 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/74 (58%), Positives = 53/74 (71%)

Query:    56 NKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P ++   A E+  + PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKDLQEVADEEIASLPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+ +LSGVQRAMW
Sbjct:   115 ADHGQLSGVQRAMW 128

GO:0031965 "nuclear membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

UNIPROTKB|E1BQP4 MRPS14 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 44/75 (58%), Positives = 53/75 (70%)

Query:    56 NKIGLGTFKPNEV--MAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRH 113
             N I   T  P E+  +A RE A   PRDS P R + RCV+TSRPRGV  RWRLSRI+FRH
Sbjct:    53 NAIRKNTILPKELQEVADREIAAL-PRDSCPVRIRNRCVLTSRPRGVKRRWRLSRIVFRH 111

Query:   114 LADYNKLSGVQRAMW 128
              AD+ ++SG+QRAMW
Sbjct:   112 FADHAQMSGIQRAMW 126

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

UNIPROTKB|Q6B860 MRPS14 "28S ribosomal protein S14, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 41/74 (55%), Positives = 51/74 (68%)

Query:    56 NKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P  +   A E+    PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKHLQEVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+ +LSG+QRA+W
Sbjct:   115 ADHGQLSGIQRAIW 128

GO:0005739 "mitochondrion" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

UNIPROTKB|E2RMB2 MRPS14 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 40/74 (54%), Positives = 51/74 (68%)

Query:    56 NKIGLGTFKPNEVMAARE-DATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P ++    + +    PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKDLQEVADGEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+ +LSGVQRA+W
Sbjct:   115 ADHGQLSGVQRAVW 128

GO:0006412 "translation" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

MGI|MGI:1928141 Mrps14 "mitochondrial ribosomal protein S14" [Mus musculus (taxid:10090)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 41/74 (55%), Positives = 51/74 (68%)

Query:    56 NKIGLGTFKPNEVMA-AREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P ++   A ++    PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKDLQEMAGDEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+  LSGVQRA+W
Sbjct:   115 ADHGLLSGVQRAIW 128

GO:0003735 "structural constituent of ribosome" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0030529 "ribonucleoprotein complex" evidence=IEA

RGD|1309432 Mrps14 "mitochondrial ribosomal protein S14" [Rattus norvegicus (taxid:10116)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 41/74 (55%), Positives = 51/74 (68%)

Query:    56 NKIGLGTFKPNEVMA-AREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P ++   A ++    PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKDLQEMAGDEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+  LSGVQRA+W
Sbjct:   115 ADHGLLSGVQRAIW 128

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA;ISO

ZFIN|ZDB-GENE-060825-75 mrps14 "mitochondrial ribosomal protein S14" [Danio rerio (taxid:7955)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 41/74 (55%), Positives = 52/74 (70%)

Query:    56 NKIGLGTFKPNEVMA-AREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N IG  T  P E+   A ++    PRDS P R + RCV+TSRPR V  RWRLSRI+FR L
Sbjct:    65 NAIGKNTILPKELQEIADKEIAALPRDSCPVRIRNRCVLTSRPRAVKRRWRLSRIVFRDL 124

Query:   115 ADYNKLSGVQRAMW 128
             AD++++SGVQR+MW
Sbjct:   125 ADHSQMSGVQRSMW 138

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

UNIPROTKB|O60783 MRPS14 "28S ribosomal protein S14, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 41/74 (55%), Positives = 50/74 (67%)

Query:    56 NKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +   T  P  +   A E+    PRDS P R + RCV+TSRPRGV  RWRLSRI+FRHL
Sbjct:    55 NSLRKNTILPKILQDVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             AD+ +LSG+QRA W
Sbjct:   115 ADHGQLSGIQRATW 128

GO:0005761 "mitochondrial ribosome" evidence=NAS

GO:0003735 "structural constituent of ribosome" evidence=TAS

GO:0006412 "translation" evidence=NAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

FB|FBgn0044030 mRpS14 "mitochondrial ribosomal protein S14" [Drosophila melanogaster (taxid:7227)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 41/74 (55%), Positives = 50/74 (67%)

Query:    56 NKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHL 114
             N +      P E+   A  +    PRDS   R + RC +TSRPRGVV ++RLSRI++RHL
Sbjct:    55 NSLRKNDILPPELREVADAEIAAFPRDSSLVRVRERCALTSRPRGVVHKYRLSRIVWRHL 114

Query:   115 ADYNKLSGVQRAMW 128
             ADYNKLSGVQRAMW
Sbjct:   115 ADYNKLSGVQRAMW 128

GO:0003735 "structural constituent of ribosome" evidence=ISS

GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS

GO:0006412 "translation" evidence=ISS

GO:0005761 "mitochondrial ribosome" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A5EX86	RS14_DICNV	No assigned EC number	0.3734	0.625	0.7843	yes	N/A
Q5L8C2	RS14_BACFN	No assigned EC number	0.3375	0.625	0.8080	yes	N/A
Q5WAR0	RS14_BACSK	No assigned EC number	0.52	0.3906	0.5617	yes	N/A
A4SCS2	RS14_PROVI	No assigned EC number	0.52	0.3906	0.5617	yes	N/A
A6KYI2	RS14_BACV8	No assigned EC number	0.3125	0.625	0.8080	yes	N/A
Q64NM1	RS14_BACFR	No assigned EC number	0.3375	0.625	0.8080	yes	N/A
Q1CY73	RS14_MYXXD	No assigned EC number	0.3655	0.6796	0.8613	yes	N/A
Q8A489	RS14_BACTN	No assigned EC number	0.325	0.625	0.8080	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	128
pfam00253	53	pfam00253, Ribosomal_S14, Ribosomal protein S14p/S	1e-12
smart00252	84	smart00252, SH2, Src homology 2 domains	1e-11
PRK08881	101	PRK08881, rpsN, 30S ribosomal protein S14; Reviewe	8e-11
COG0199	61	COG0199, RpsN, Ribosomal protein S14 [Translation,	6e-09
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	3e-07
CHL00074	100	CHL00074, rps14, ribosomal protein S14	3e-07
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	3e-07
pfam00017	77	pfam00017, SH2, SH2 domain	1e-06
cd09929	121	cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) dom	2e-06
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	2e-05
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	4e-05
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	4e-05
PRK08061	61	PRK08061, rpsN, 30S ribosomal protein S14; Reviewe	2e-04
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	7e-04
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	0.002
cd10402	105	cd10402, SH2_C-SH2_Zap70, C-terminal Src homology	0.003
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	0.004

>gnl|CDD|201115 pfam00253, Ribosomal_S14, Ribosomal protein S14p/S29e

 Score = 57.6 bits (140), Expect = 1e-12
 Identities = 24/47 (51%), Positives = 33/47 (70%)

Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQR 125
           PR+S P R + RCV+T RPRGV+ ++ LSRI FR LA    + GV++
Sbjct: 7   PRNSSPTRIRNRCVLTGRPRGVIRKFGLSRICFRELAHKGLIPGVKK 53

This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes. Length = 53

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 56.1 bits (136), Expect = 1e-11
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
            W+H  ++RE A +++   G+G FLVR S SS     L++   G+  +  IR+ +D K 
Sbjct: 1  QPWYHGFISREEAEKLLKNEGDGDFLVRDSESSPGDYVLSVRVKGKVKHYRIRRNEDGKF 60

Query: 59 GLG 61
           L 
Sbjct: 61 YLE 63

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|181574 PRK08881, rpsN, 30S ribosomal protein S14; Reviewed

 Score = 54.4 bits (132), Expect = 8e-11
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 65  PNEVMAAREDATNH----PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKL 120
           PN     R +A       PR+S P R + RC +T RPRG   ++ LSRI  R LA   ++
Sbjct: 34  PNLSDEERYEARLKLQKLPRNSSPTRLRNRCELTGRPRGYYRKFGLSRIKLRELAHRGEI 93

Query: 121 SGVQRAMW 128
            GV +A W
Sbjct: 94  PGVVKASW 101

Length = 101

>gnl|CDD|223277 COG0199, RpsN, Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]

 Score = 48.4 bits (116), Expect = 6e-09
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query: 71  AREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           A+      PR   P R + RC    RPRGV+ ++ L RI FR LA   ++ GV++A W
Sbjct: 4   AKLKLKALPRPKSPGRGRNRCRRCGRPRGVIRKFGLCRICFRELAHKGEIPGVKKASW 61

Length = 61

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 44.7 bits (106), Expect = 3e-07
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 3  WFH-SVNRERAVQMV--AAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
          W H +++R  AV+++   A  +G FLVR S        LTL Y    Y+  I+ RDD 
Sbjct: 2  WLHGALDRNEAVEILKQKADADGSFLVRYSRRRPGGYVLTLVYENHVYHFEIQNRDDK 59

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|214354 CHL00074, rps14, ribosomal protein S14

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 21/50 (42%), Positives = 28/50 (56%)

Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PR+S P R   RC +T RPRG    + LSR + R +A    L GV ++ W
Sbjct: 51  PRNSAPTRLHNRCFLTGRPRGNYRDFGLSRHVLREMAHACLLPGVTKSSW 100

Length = 100

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 44.4 bits (105), Expect = 3e-07
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYG-GRAYNIFIRKRDDNKIG 59
          WFH S++RE A +++    +G FLVR SSS      L++  G G+  +  I + +     
Sbjct: 2  WFHGSISREEAERLLRGKPDGTFLVRESSSEPGDYVLSVRSGDGKVKHYLIERNEGGYYL 61

Query: 60 LG 61
          LG
Sbjct: 62 LG 63

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 3  WFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDNK 57
          W+H  ++RE A +++     +G FLVR S S     TL++   GR  +  I+  D+  
Sbjct: 1  WYHGKISREEAERLLLNPKPDGTFLVRESESKPGDYTLSVRDDGRVKHYRIQSLDNGG 58

Length = 77

>gnl|CDD|198183 cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 4/46 (8%)

Query: 21 EGCFLVRPSS---SSEPLTLTLWYGGRAYNIFIRKRDDNKI-GLGT 62
          +G FLVR SS   SS+P TL + Y  + YNI IR  ++ +   LGT
Sbjct: 33 DGTFLVRDSSGKDSSQPYTLMVLYNDKVYNIQIRFLENTRQYALGT 78

BLNK (also known as SLP-65 or BASH) is an important adaptor protein expressed in B-lineage cells. BLNK consists of a N-terminal sterile alpha motif (SAM) domain and a C-terminal SH2 domain. BLNK is a cytoplasmic protein, but a part of it is bound to the plasma membrane through an N-terminal leucine zipper motif and transiently bound to a cytoplasmic domain of Iga through its C-terminal SH2 domain upon B cell antigen receptor (BCR)-stimulation. A non-ITAM phosphotyrosine in Iga is necessary for the binding with the BLNK SH2 domain and/or for normal BLNK function in signaling and B cell activation. Upon phosphorylation BLNK binds Btk and PLCgamma2 through their SH2 domains and mediates PLCgamma2 activation by Btk. BLNK also binds other signaling molecules such as Vav, Grb2, Syk, and HPK1. BLNK has been shown to be necessary for BCR-mediated Ca2+ mobilization, for the activation of mitogen-activated protein kinases such as ERK, JNK, and p38 in a chicken B cell line DT40, and for activation of transcription factors such as NF-AT and NF-kappaB in human or mouse B cells. BLNK is involved in B cell development, B cell survival, activation, proliferation, and T-independent immune responses. BLNK is structurally homologous to SLP-76. SLP-76 and (linker for activation of T cells) LAT are adaptor/linker proteins in T cell antigen receptor activation and T cell development. BLNK interacts with many downstream signaling proteins that interact directly with both SLP-76 and LAT. New data suggest functional complementation of SLP-76 and LAT in T cell antigen receptor function with BLNK in BCR function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 121

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 3  WFHS------VNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD 55
          WFH          E+ +     GG+G FLVR S +     TL+ W  G+  +  IR R +
Sbjct: 6  WFHGKLGDGRDEAEKLLLEYCEGGDGTFLVRESETFVGDYTLSFWRNGKVQHCRIRSRQE 65

Query: 56 NKIGLGTFKPNEVMA 70
          N         N V  
Sbjct: 66 NGEKKYYLTDNLVFD 80

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 4  FHS-VNRERAVQMVAAGGEGCFLVRPSSSSEPL-TLTLWYGGRAYN 47
          +H  ++RE A Q+++   +G +L+R SS  +   TL+L + G+  N
Sbjct: 9  YHGLISREEAEQLLSGASDGSYLIRESSRDDGYYTLSLRFNGKVKN 54

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 1  MAWFH-SVNRERAVQMVA--AGGEGCFLVRPS-SSSEPLTLTLWYGGRAYNIFIRKRDDN 56
          + W+H  ++RE A  ++    G +G FLVR S S+     L+L   G   +  IR+  ++
Sbjct: 1  LRWYHGKISREVAEALLLREGGRDGLFLVRESTSAPGDYVLSLLAQGEVLHYQIRRHGED 60

Query: 57 K 57
           
Sbjct: 61 A 61

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|181216 PRK08061, rpsN, 30S ribosomal protein S14; Reviewed

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 90  RCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           RC    RP  V  ++ L RI FR LA   ++ GV++A W
Sbjct: 23  RCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61

Length = 61

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPS 29
          M WFH  ++RE A +++    +G FLVR S
Sbjct: 3  MPWFHGKISREEAERLLQPPEDGLFLVRES 32

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 3  WFHS-VNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
          W+H  ++R  A  ++++G  G FLVR S SS    +++L Y GR Y+  I +  D K+
Sbjct: 5  WYHGPISRNAAEYLLSSGINGSFLVRESESSPGQYSISLRYDGRVYHYRISEDSDGKV 62

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|198265 cd10402, SH2_C-SH2_Zap70, C-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70)

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE--GCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
          M W+H S+ R+ A + + +G +  G FL+R    S    L+L YG   Y+  I +    K
Sbjct: 10 MPWYHGSIARDEAERRLYSGAQPDGKFLLRERKESGTYALSLVYGKTVYHYRIDQDKSGK 69

Query: 58 IGL 60
            +
Sbjct: 70 YSI 72

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the C-terminus SH2 domains of Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 105

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 3  WFH-SVNRERAVQM-VAAGGEGCFLVRPS 29
          WFH  ++RE A  M V  GG G FLVR S
Sbjct: 2  WFHGKISREEAYNMLVKVGGPGSFLVRES 30

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	128
PRK06911	100	rpsN 30S ribosomal protein S14; Reviewed	99.96
PRK08881	101	rpsN 30S ribosomal protein S14; Reviewed	99.96
CHL00074	100	rps14 ribosomal protein S14	99.96
KOG1741|consensus	103		99.93
COG0199	61	RpsN Ribosomal protein S14 [Translation, ribosomal	99.91
PF00253	55	Ribosomal_S14: Ribosomal protein S14p/S29e; InterP	99.87
PRK08061	61	rpsN 30S ribosomal protein S14; Reviewed	99.85
KOG0197|consensus	468		99.78
KOG4278|consensus	1157		99.73
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.72
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.7
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.67
PRK05766	52	rps14P 30S ribosomal protein S14P; Reviewed	99.36
KOG1264|consensus	1267		99.24
KOG4792|consensus	293		99.22
KOG1264|consensus	1267		99.12
KOG4637|consensus	464		99.12
KOG4226|consensus	379		99.09
KOG0790|consensus	600		99.07
KOG4637|consensus	464		98.93
KOG0194|consensus	474		98.79
KOG0790|consensus	600		98.77
KOG2996|consensus	865		98.67
KOG1930|consensus	483		98.66
KOG3751|consensus	622		98.41
PTZ00218	54	40S ribosomal protein S29; Provisional	98.38
KOG3601|consensus	222		98.31
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	96.96
KOG3506|consensus	56		94.69
KOG1856|consensus	1299		90.99
KOG3697|consensus	345		83.56
TIGR01764	49	excise DNA binding domain, excisionase family. An	83.52

>PRK06911 rpsN 30S ribosomal protein S14; Reviewed

Probab=99.96  E-value=7.6e-31  Score=173.10  Aligned_cols=83  Identities=20%  Similarity=0.358  Sum_probs=76.6

Q ss_pred             eeEEeeeeecccccccccCCCHHHH-HHHHHhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCce
Q psy9697          45 AYNIFIRKRDDNKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGV  123 (128)
Q Consensus        45 v~hy~I~~~~~k~i~~n~~L~~~~r-~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv  123 (128)
                      |.-|..++..+++++.|+++|.++- ++++ |+++|+|++|||++|||+.||||+||+++|+|||++|||+|+.|+||||
T Consensus        17 ~~k~~~kR~~lK~i~~~~~l~~~~~~a~~k-L~~lPrnss~~R~rNRC~~TGR~Rgv~r~FgLsRi~~Rela~~G~lPGv   95 (100)
T PRK06911         17 VEKYRQRRNELKQLIKSSDDFQVIMESQAK-LAKLPVNSNPVRYVTRCKQCGRPHAVYRKFNLCRICLRQQLMVGNIPGG   95 (100)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCHHHHHHHHH-HHhCCCccCcchhhcccCCCCCCcccccccCchHHHHHHHHHcCCCCCe
Confidence            4456777788899999999999865 6677 9999999999999999999999999999999999999999999999999


Q ss_pred             EeccC
Q psy9697         124 QRAMW  128 (128)
Q Consensus       124 ~k~~W  128 (128)
                      +||||
T Consensus        96 ~KaSW  100 (100)
T PRK06911         96 RKSSW  100 (100)
T ss_pred             ecccC
Confidence            99999

>PRK08881 rpsN 30S ribosomal protein S14; Reviewed

Probab=99.96  E-value=4.7e-31  Score=174.63  Aligned_cols=83  Identities=31%  Similarity=0.488  Sum_probs=77.5

Q ss_pred             eeEEeeeeecccccccccCCCHHHH--HHHHHhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCc
Q psy9697          45 AYNIFIRKRDDNKIGLGTFKPNEVM--AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSG  122 (128)
Q Consensus        45 v~hy~I~~~~~k~i~~n~~L~~~~r--~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~g  122 (128)
                      +..|.+.+..+++++.|+++|.+++  ++.+ |+++|+|++||+++|||+.||||+|++++|+|||++||++|+.|+|||
T Consensus        17 ~~k~~~kR~~lK~i~~~~~l~~~~r~~~~~k-L~~lPr~ss~tRi~NRC~~TGR~Rgv~r~F~LsRi~fRela~~G~lpG   95 (101)
T PRK08881         17 VAKYAAKRAELKAIISDPNLSDEERYEARLK-LQKLPRNSSPTRLRNRCELTGRPRGYYRKFGLSRIKLRELAHRGEIPG   95 (101)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH-HHhCCcccchHHHhccccCCCCCCccccCcCchHHHHHHHHHcCCCCC
Confidence            4567778888999999999999998  5555 999999999999999999999999999999999999999999999999


Q ss_pred             eEeccC
Q psy9697         123 VQRAMW  128 (128)
Q Consensus       123 v~k~~W  128 (128)
                      |+||||
T Consensus        96 v~KsSW  101 (101)
T PRK08881         96 VVKASW  101 (101)
T ss_pred             eecccC
Confidence            999999

>CHL00074 rps14 ribosomal protein S14

Probab=99.96  E-value=4.5e-30  Score=169.62  Aligned_cols=82  Identities=29%  Similarity=0.460  Sum_probs=75.9

Q ss_pred             eeEEeeeeecccccccccCCCHHHH--HHHHHhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCc
Q psy9697          45 AYNIFIRKRDDNKIGLGTFKPNEVM--AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSG  122 (128)
Q Consensus        45 v~hy~I~~~~~k~i~~n~~L~~~~r--~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~g  122 (128)
                      |.-|++.+..+++++.|+++|.+ +  ++++ ++++|+|++||+++|||+.||||+||+++|+|||++|||+|+.|+|||
T Consensus        17 ~~k~~~kR~~lK~i~~~~~l~~~-r~~a~~k-L~~lpr~ss~tRi~NRC~~TGR~Rgv~r~F~LsRi~~Re~a~~G~ipG   94 (100)
T CHL00074         17 VQKYHLKRRSLKKEIKKVSSLSE-KWEIHGK-LQSLPRNSAPTRLHNRCFLTGRPRGNYRDFGLSRHVLREMAHACLLPG   94 (100)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcHH-HHHHHHH-HHhCCcccchHHHhccccCCCCCCccccCcCchHHHHHHHHHcCCCCC
Confidence            34566777888999999999999 7  5555 999999999999999999999999999999999999999999999999


Q ss_pred             eEeccC
Q psy9697         123 VQRAMW  128 (128)
Q Consensus       123 v~k~~W  128 (128)
                      |+||||
T Consensus        95 v~KaSW  100 (100)
T CHL00074         95 VTKSSW  100 (100)
T ss_pred             cccccC
Confidence            999999

>KOG1741|consensus

Probab=99.93  E-value=1.2e-27  Score=155.02  Aligned_cols=83  Identities=41%  Similarity=0.666  Sum_probs=75.6

Q ss_pred             eEEeeeeecccccccccCCCHHHH-HHHHHhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCceE
Q psy9697          46 YNIFIRKRDDNKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQ  124 (128)
Q Consensus        46 ~hy~I~~~~~k~i~~n~~L~~~~r-~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv~  124 (128)
                      +.|.+.+..+++|.+|++||..++ ....+++++|+|+.||+++|+|+.||||||+++.|+|||+.||++|..|.+|||+
T Consensus        20 ~e~~~~R~slk~i~knp~LP~~~r~ea~~kl~alPrns~ptrI~NRCv~TGR~R~v~r~frLsR~~FR~~A~~~~LpGv~   99 (103)
T KOG1741|consen   20 KEYELERRSLKEISKNPILPEKLRDEAAEKLQALPRNSAPTRIKNRCVFTGRPRGVYRDFRLSRHVFRELADAGALPGVT   99 (103)
T ss_pred             HHHHHHHHHHHHHHhCCcccHHHHHHHHHHHhcCccccchHHHHHHHHhcCCcccccchhhhHHHHHHHHHHhccCcCcc
Confidence            445566666799999999999999 4444499999999999999999999999999999999999999999999999999


Q ss_pred             eccC
Q psy9697         125 RAMW  128 (128)
Q Consensus       125 k~~W  128 (128)
                      ||||
T Consensus       100 rasW  103 (103)
T KOG1741|consen  100 RASW  103 (103)
T ss_pred             cccC
Confidence            9999

>COG0199 RpsN Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]

Probab=99.91  E-value=6.4e-25  Score=131.80  Aligned_cols=54  Identities=41%  Similarity=0.776  Sum_probs=53.2

Q ss_pred             hhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCceEeccC
Q psy9697          75 ATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW  128 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv~k~~W  128 (128)
                      +.++|++..+++..|+|..||||+||+++|+|||++|||+|++|+||||+|+||
T Consensus         8 ~~~~p~~~~~~r~~nRC~~cGRprg~~Rkf~lcR~cfRE~A~~g~ipGv~K~sW   61 (61)
T COG0199           8 LKALPRPKSPGRGRNRCRRCGRPRGVIRKFGLCRICFRELAHKGEIPGVKKASW   61 (61)
T ss_pred             hhcCCCCCccccccccccccCCCccchhhhhhHHHHHHHHhhccCCCCeEeccC
Confidence            778999999999999999999999999999999999999999999999999999

>PF00253 Ribosomal_S14: Ribosomal protein S14p/S29e; InterPro: IPR001209 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=99.87  E-value=1.6e-22  Score=120.31  Aligned_cols=54  Identities=46%  Similarity=0.790  Sum_probs=51.7

Q ss_pred             HhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCceEecc
Q psy9697          74 DATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAM  127 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv~k~~  127 (128)
                      ++.++|++++++++.|+|+.|||++|++++|+|||++||++|..|+||||+|||
T Consensus         2 kl~~~p~~s~~~r~~nrC~~tGR~rgv~r~f~lsR~~fR~~a~~g~l~G~~KsS   55 (55)
T PF00253_consen    2 KLSKLPRNSSPTRIKNRCVITGRSRGVIRKFGLSRICFRELASKGLLPGVKKSS   55 (55)
T ss_dssp             HSTSSSSSSSCTGSCSSBSSSCSSSSBETTTSSBHHHHHHHHHTTSSTTEEES-
T ss_pred             hhhhCCCCCCCCCCCeecccCCCceeeeccccccHHHHHHHHHcCCCCCEEeCC
Confidence            378999999999999999999999999999999999999999999999999997

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. S14 is one of the proteins from the small ribosomal subunit. In Escherichia coli, S14 is known to be required for the assembly of 30S particles and may also be responsible for determining the conformation of 16S rRNA at the A site. It belongs to a family of ribosomal proteins [, ] that include, bacterial, algal and plant chloroplast, yeast mitochondrial, cyanelle and archael, Methanococcus vannielii S14's, as well as yeast mitochondrial MRP2, yeast YS29A/B and mammalian S29.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2XZN_N 2XZM_N 1S1H_N 3IZ6_N 2YKR_N 2QBB_N 3I1Z_N 3OAQ_N 3R8O_N 2Z4K_N ....

>PRK08061 rpsN 30S ribosomal protein S14; Reviewed

Probab=99.85  E-value=1.1e-21  Score=118.03  Aligned_cols=52  Identities=37%  Similarity=0.659  Sum_probs=48.2

Q ss_pred             hhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCceEeccC
Q psy9697          75 ATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW  128 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv~k~~W  128 (128)
                      ..+.|++  +|+++|+|+.||||+|++++|+|||++|||+|..|+||||+||||
T Consensus        10 ~~~~~k~--~~r~~nRC~~tGR~rgvir~fgl~R~~FRe~A~~G~ipGv~KasW   61 (61)
T PRK08061         10 AKRKPKF--KVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW   61 (61)
T ss_pred             hhcCCCC--CcccceeeecCCCCcceeccCCccHHHHHHHHHcCcCCCeeeccC
Confidence            5556655  599999999999999999999999999999999999999999999

>KOG0197|consensus

Probab=99.78  E-value=1.1e-18  Score=141.04  Aligned_cols=126  Identities=20%  Similarity=0.286  Sum_probs=99.6

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEeCC------EeeEEeeeeeccccc---ccc-cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWYGG------RAYNIFIRKRDDNKI---GLG-TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~~~------~v~hy~I~~~~~k~i---~~n-~~L~~   66 (128)
                      +|||+ +|+|++||+.|  ..+..|+||||+|++ +|+|+|||+...      .|+||+|+..+.+.+   +.. ..++.
T Consensus        81 ~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~  160 (468)
T KOG0197|consen   81 EPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSS  160 (468)
T ss_pred             CCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhh
Confidence            58999 89999999655  677889999999987 899999999976      999999999887532   211 11111


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccccC----CCCcc-ccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVITS----RPRGV-VLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~tg----r~~g~-~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      .  .++..++...+++..+++..+|...+    .+.+. ...|+++|..+  -+.+++|+|+.|..+.|
T Consensus       161 l--~~lv~~~~~~~~gl~~~l~~p~~~~~~~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~  227 (468)
T KOG0197|consen  161 L--QQLVNYYSKNADGLCTRLRDPCSKQGHTKPQTPDLARDPWEIPREELKLIRELGSGQFGEVWLGKW  227 (468)
T ss_pred             H--HHHHhhhhccCcchhhcccCchhccCCCCCCCCccccCCeeecHHHHHHHHHhcCCccceEEEEEE
Confidence            1  33444888999999999999998642    23344 68899999966  67899999999999987

>KOG4278|consensus

Probab=99.73  E-value=8.6e-18  Score=139.59  Aligned_cols=123  Identities=25%  Similarity=0.425  Sum_probs=104.0

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccccCCCHHHH----HHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLGTFKPNEVM----AARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n~~L~~~~r----~~~~   73 (128)
                      +.||| .++|+.||-+|...-.|+||||+|++ +|.|++|++|.|.||||+|..... |.|+..     +.|    +-+.
T Consensus       152 hsWYHGpvSRsaaEy~LsSgInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~-----EsrF~TLaELV  226 (1157)
T KOG4278|consen  152 HSWYHGPVSRSAAEYILSSGINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQ-----ESRFRTLAELV  226 (1157)
T ss_pred             cccccCccccchhhhhhhcCcccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEee-----hhhhhHHHHHH
Confidence            47999 79999999999888889999999997 899999999999999999998765 555432     223    3444


Q ss_pred             HhhcCCCCCCCcccCCcccccCCCC--ccc---cccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          74 DATNHPRDSHPCRTQPRCVITSRPR--GVV---LRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nrC~~tgr~~--g~~---~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      ..+..-.|++.|-|.-+-.+++.|+  |+.   ++|++.|..+  +.+++-||.+.|..+.|
T Consensus       227 HHHStvADGLittLhYPApK~nKptvygvSPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvW  288 (1157)
T KOG4278|consen  227 HHHSTVADGLITTLHYPAPKKNKPTVYGVSPNADKWEMERTDITMKHKLGGGQYGEVYEGVW  288 (1157)
T ss_pred             hhccccccceeEeeeccCccCCCCceeeecCCcchhhccchheeeeeccCCCcccceeeeee
Confidence            4677888999999999999988887  333   8999999966  88999999999999998

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.72  E-value=3.9e-17  Score=105.66  Aligned_cols=85  Identities=25%  Similarity=0.394  Sum_probs=64.9

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccccc--c---cCCCHHHHHHHHH
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGL--G---TFKPNEVMAARED   74 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~--n---~~L~~~~r~~~~~   74 (128)
                      +||| .|+|++||++|+...+|+||||.|++ ++.|+||+..++.|+||+|......+...  .   +++++.+.     
T Consensus         1 ~w~~g~i~r~~Ae~~L~~~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~-----   75 (94)
T cd00173           1 PWYHGPISREEAEELLKKKPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIE-----   75 (94)
T ss_pred             CccccCCCHHHHHHHHhcCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHH-----
Confidence            7999 89999999999778999999999996 89999999999999999999887655433  3   33333333     


Q ss_pred             hhcCCC--CCCCcccCCcc
Q psy9697          75 ATNHPR--DSHPCRTQPRC   91 (128)
Q Consensus        75 l~~l~~--~~~~~rl~nrC   91 (128)
                      ++..+.  +..++.+..+|
T Consensus        76 ~y~~~~~~~~~~~~L~~p~   94 (94)
T cd00173          76 HYQKNPLSDGLGVKLRYPV   94 (94)
T ss_pred             HHhhCccCCCcccEeCCcC
Confidence            333333  66666666665

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>smart00252 SH2 Src homology 2 domains

Probab=99.70  E-value=1.1e-16  Score=102.03  Aligned_cols=61  Identities=30%  Similarity=0.502  Sum_probs=53.9

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec-ccccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD-DNKIGLG   61 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~-~k~i~~n   61 (128)
                      ++||| .|+|++||++|..+.+|+||||.|++ ++.|+||+..++.|+||+|.... .++.+.+
T Consensus         1 ~~w~~g~i~r~~Ae~lL~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~   64 (84)
T smart00252        1 QPWYHGFISREEAEKLLKNEGDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDG   64 (84)
T ss_pred             CCeecccCCHHHHHHHHhcCCCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECC
Confidence            58999 89999999999666799999999998 89999999999999999999877 4555544

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.67  E-value=1.6e-16  Score=99.83  Aligned_cols=54  Identities=31%  Similarity=0.671  Sum_probs=50.7

Q ss_pred             CCC-CCCHHHHHHhHhc-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc
Q psy9697           3 WFH-SVNRERAVQMVAA-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN   56 (128)
Q Consensus         3 W~~-~i~r~~ae~ll~~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k   56 (128)
                      ||| .|+|++||++|.. .++|+||||.|.+ +|.|+||++.+++|+||+|.+.+.+
T Consensus         1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~   57 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENG   57 (77)
T ss_dssp             TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTS
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCc
Confidence            998 8999999999966 7899999999996 8999999999999999999999876

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>PRK05766 rps14P 30S ribosomal protein S14P; Reviewed

Probab=99.36  E-value=3.6e-13  Score=78.84  Aligned_cols=41  Identities=22%  Similarity=0.443  Sum_probs=39.1

Q ss_pred             cCCCCCCCcccCCcccccCCCCccccccC--CCHHHHHHhhcc
Q psy9697          77 NHPRDSHPCRTQPRCVITSRPRGVVLRWR--LSRIMFRHLADY  117 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~tgr~~g~~~~~~--l~R~~fr~~~~~  117 (128)
                      ..|+++++++..|+|+.||||+|++++|+  |||++|||+|..
T Consensus         3 ~~p~~~~~~r~~nrC~~~Gr~rgvirkf~l~lcR~~FRe~A~~   45 (52)
T PRK05766          3 KPPKKRKYGKGARECQRCGRKQGLIRKYGLYLCRQCFREVAPK   45 (52)
T ss_pred             CCCCCCCCCCCCceeecCCCCceeHHhhCCcccHHHHHHHHHH
Confidence            47999999999999999999999999999  999999999976

>KOG1264|consensus

Probab=99.24  E-value=1.3e-11  Score=104.77  Aligned_cols=60  Identities=23%  Similarity=0.439  Sum_probs=52.6

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeeccccccc
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGL   60 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~   60 (128)
                      .|||| .++|++||++| ....||+||||.++.++.|++|+..+++|+|++|.+.+--+.+.
T Consensus       648 k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~  709 (1267)
T KOG1264|consen  648 KPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLG  709 (1267)
T ss_pred             CccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEec
Confidence            48999 89999999999 77899999999666688999999999999999999877655443

>KOG4792|consensus

Probab=99.22  E-value=1.9e-11  Score=90.85  Aligned_cols=52  Identities=27%  Similarity=0.510  Sum_probs=48.5

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeee
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKR   53 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~   53 (128)
                      +||. .+||++|..+|+....|.||||||++ +|+|+|||.-+.+|-||-|.+.
T Consensus        12 swYfg~mSRqeA~~lL~~~r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~   65 (293)
T KOG4792|consen   12 SWYFGPMSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSS   65 (293)
T ss_pred             ceecCcccHHHHHHHhcCcceeeEEEecCCCCCCceEEEEecCcceeeeeecCC
Confidence            5997 79999999999877799999999998 9999999999999999999873

>KOG1264|consensus

Probab=99.12  E-value=1.6e-10  Score=98.22  Aligned_cols=113  Identities=22%  Similarity=0.369  Sum_probs=73.5

Q ss_pred             CCCC-CCC-HHHHHHhHh------cCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeee-cc---cccccccCCCHHH
Q psy9697           2 AWFH-SVN-RERAVQMVA------AGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKR-DD---NKIGLGTFKPNEV   68 (128)
Q Consensus         2 ~W~~-~i~-r~~ae~ll~------~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~-~~---k~i~~n~~L~~~~   68 (128)
                      .||| ++- |.+||++|+      ..+||+||||+|+. .|+|+||+|.+|+|.|-+|+.. ..   |||..++..-+.+
T Consensus       535 ~WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdsl  614 (1267)
T KOG1264|consen  535 KWFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSL  614 (1267)
T ss_pred             hhhhcccccchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHH
Confidence            6999 787 999999992      13699999999998 9999999999999999999854 32   6665543322222


Q ss_pred             HHHHHHhh--cCCCCCCCcccCCcccccCCCCccccccC---CCHHHHHHhhc
Q psy9697          69 MAAREDAT--NHPRDSHPCRTQPRCVITSRPRGVVLRWR---LSRIMFRHLAD  116 (128)
Q Consensus        69 r~~~~~l~--~l~~~~~~~rl~nrC~~tgr~~g~~~~~~---l~R~~fr~~~~  116 (128)
                      -+....|.  -+...---.+|..||.... |+- .+.|=   ++|.+--++++
T Consensus       615 Y~LI~~Y~~~~Lr~aeF~m~LtePvPqp~-~He-~k~W~~as~treqAE~mL~  665 (1267)
T KOG1264|consen  615 YALIQHYRETHLRCAEFEMRLTEPVPQPN-PHE-SKPWYHASLTREQAEDMLM  665 (1267)
T ss_pred             HHHHHHHHhccccccceEEEecCCCCCCC-ccc-CCccccccccHHHHHHHHh
Confidence            12222121  2333333467889998744 331 13332   66665544444

>KOG4637|consensus

Probab=99.12  E-value=1.8e-10  Score=90.63  Aligned_cols=91  Identities=24%  Similarity=0.248  Sum_probs=69.0

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccc-cccccCCCHHHH----HHHHH
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNK-IGLGTFKPNEVM----AARED   74 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~-i~~n~~L~~~~r----~~~~~   74 (128)
                      +||. +|||+++.+.|.+.+||+||||+-++ +|+||||++.++-++-++|-..+.|| ++...++...++    +....
T Consensus        24 ~WYWgdisReev~~~L~d~PDGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelIn~yr~~S  103 (464)
T KOG4637|consen   24 EWYWGDISREEVNKKLRDQPDGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELINHYRNES  103 (464)
T ss_pred             cccccccCHHHHHHHhcCCCCCcEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHHHHHhhhH
Confidence            7997 89999999999999999999999988 99999999999999999999888877 332233333333    22222


Q ss_pred             hhcCCCCCCCcccCCcccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~   93 (128)
                      |. +-...+-+++.+|-..
T Consensus       104 L~-~yN~~LDvrLlyPVs~  121 (464)
T KOG4637|consen  104 LA-QYNPKLDVRLLYPVSR  121 (464)
T ss_pred             HH-hhCcccceeeechHHH
Confidence            22 3344566777777664

>KOG4226|consensus

Probab=99.09  E-value=2.6e-10  Score=86.95  Aligned_cols=59  Identities=25%  Similarity=0.396  Sum_probs=52.2

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccc
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIG   59 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~   59 (128)
                      .|||. +|+|.+||.+| ..+.+|.||||+|++ +|+|++|+...++-+||++...+.-+-|
T Consensus       281 ~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq~~d~~ycI  342 (379)
T KOG4226|consen  281 RPWYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQLVDNVYCI  342 (379)
T ss_pred             CcceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEEEecceEEe
Confidence            37997 89999999999 667899999999998 9999999999999999999877664433

>KOG0790|consensus

Probab=99.07  E-value=2.4e-10  Score=92.01  Aligned_cols=58  Identities=26%  Similarity=0.491  Sum_probs=52.9

Q ss_pred             CCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCC---------EeeEEeeeeecccccc
Q psy9697           2 AWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGG---------RAYNIFIRKRDDNKIG   59 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~---------~v~hy~I~~~~~k~i~   59 (128)
                      -||| +++-.+||.|| +..+.|+||||+|.+ ||+|+|||+.++         +|.|..|+..+.+|-+
T Consensus       111 rWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydV  180 (600)
T KOG0790|consen  111 RWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDV  180 (600)
T ss_pred             hhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEeccccccc
Confidence            4999 89999999999 778999999999988 999999999976         8999999999888744

>KOG4637|consensus

Probab=98.93  E-value=1.2e-09  Score=86.13  Aligned_cols=89  Identities=18%  Similarity=0.249  Sum_probs=68.8

Q ss_pred             CCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccc-cc----cccCCCHHHH-HHHHHh
Q psy9697           3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK-IG----LGTFKPNEVM-AAREDA   75 (128)
Q Consensus         3 W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~-i~----~n~~L~~~~r-~~~~~l   75 (128)
                      |+- .+.|.+||++|+..+||+||||+|+..|.|+|||.+++.|+|--|...+.++ +.    --.+|.+.++ ++...|
T Consensus       334 w~~~~a~r~kAe~llrg~~dGtFLIR~ss~~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~hY~h~SL  413 (464)
T KOG4637|consen  334 WRVRDANRDKAEELLRGKPDGTFLIRESSKGGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYSTLKELVLHYQHTSL  413 (464)
T ss_pred             hHHhhhhHHHHHHHhcCCCCCeEEEeeccCCCceEEEEEECCceeeeEEeeccccccccchhHHHHHHHHHHHHHhhhhH
Confidence            775 7999999999999999999999987789999999999999999998887644 32    2256777777 444323


Q ss_pred             hcCCCCCCCcccCCccc
Q psy9697          76 TNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        76 ~~l~~~~~~~rl~nrC~   92 (128)
                      - ...|+.-|.++.|-.
T Consensus       414 e-~HnDal~ttLr~Pv~  429 (464)
T KOG4637|consen  414 E-QHNDALTTTLRYPVF  429 (464)
T ss_pred             H-hhcccccccccccee
Confidence            2 345667777776654

>KOG0194|consensus

Probab=98.79  E-value=2.2e-08  Score=82.09  Aligned_cols=115  Identities=17%  Similarity=0.221  Sum_probs=79.0

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CC---CE-EEEEEeC--CEeeEEeeeeecccccccc----cCCCHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SE---PL-TLTLWYG--GRAYNIFIRKRDDNKIGLG----TFKPNEV   68 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~---~~-~lsv~~~--~~v~hy~I~~~~~k~i~~n----~~L~~~~   68 (128)
                      ++||| -+.|++|+.+|..  +|.||||.|+. +|   .+ .|||...  .+++||.|++.+.+++...    +++++.+
T Consensus        49 ~~~yHG~l~red~~~lL~~--~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li  126 (474)
T KOG0194|consen   49 LPYYHGLLPREDAEKLLKN--DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELV  126 (474)
T ss_pred             CccccccccHhHHHHHhCC--CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHH
Confidence            58999 5999999999954  79999999986 44   23 8888875  7899999999887665433    3333333


Q ss_pred             HHHHHHhhcCCCCCCCcccCCcccccCCCCccccccCC--CHHHHHHhhccCCCCceEecc
Q psy9697          69 MAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRL--SRIMFRHLADYNKLSGVQRAM  127 (128)
Q Consensus        69 r~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l--~R~~fr~~~~~G~~~gv~k~~  127 (128)
                       ..+. .+..+--+..+.|++|-..        ..|+|  +-+.+-+++|+|.|+.|.+|.
T Consensus       127 -~~~~-~~~~~~~~~~~~L~~PI~r--------~~Wel~H~~v~l~kkLGeGaFGeV~~G~  177 (474)
T KOG0194|consen  127 -NYYK-FSKLEITGKNFFLKRPIPR--------QKWELSHSDIELGKKLGEGAFGEVFKGK  177 (474)
T ss_pred             -HHHH-hcccceeccceeecccccc--------cccEEeccCccccceeecccccEEEEEE
Confidence             2222 3334444433344444333        44774  445667999999999999875

>KOG0790|consensus

Probab=98.77  E-value=1.5e-08  Score=81.79  Aligned_cols=89  Identities=20%  Similarity=0.269  Sum_probs=67.4

Q ss_pred             CCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccc-c---cccCCCHHHH-HHHH
Q psy9697           2 AWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKI-G---LGTFKPNEVM-AARE   73 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i-~---~n~~L~~~~r-~~~~   73 (128)
                      .||| +|+-.+||.|| ....||.||.|.|++ +|.|+|++..+++|.|++|...+..+- .   +-.++++.+. +...
T Consensus         5 ~wfh~~~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyyme~   84 (600)
T KOG0790|consen    5 RWFHPDLSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYMEH   84 (600)
T ss_pred             hhcCCCccchhHHHHHHHhccccchhhccccCCCcceeEEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHHhh
Confidence            4999 89999999999 567999999999997 899999999999999999998876542 2   2256666666 2222


Q ss_pred             HhhcCCCCCCCcccCCc
Q psy9697          74 DATNHPRDSHPCRTQPR   90 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nr   90 (128)
                      .-....+|+....++.|
T Consensus        85 ~~~lkekng~~ielK~p  101 (600)
T KOG0790|consen   85 HGQLKEKNGDVIELKYP  101 (600)
T ss_pred             hHHHHhcCCCEEEecCC
Confidence            11234566666666665

>KOG2996|consensus

Probab=98.67  E-value=2.3e-08  Score=82.90  Aligned_cols=69  Identities=17%  Similarity=0.291  Sum_probs=57.5

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccc-cc---cCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIG-LG---TFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~-~n---~~L~~~~r   69 (128)
                      .+||. .+-|.+||..|....+|+||||.+.. .+.|++|+.++..|+|++|...+.++.+ .+   .++.+.+.
T Consensus       685 ~~WyaG~MERaqaes~Lk~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELVe  759 (865)
T KOG2996|consen  685 FPWYAGEMERAQAESTLKNRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELVE  759 (865)
T ss_pred             hhhhcchHhhhhhhhHhhcCCCceEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHHH
Confidence            47997 79999999999888999999999976 7889999999999999999988776644 33   34444444

>KOG1930|consensus

Probab=98.66  E-value=2.5e-08  Score=79.65  Aligned_cols=55  Identities=24%  Similarity=0.437  Sum_probs=46.5

Q ss_pred             CCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEe---------------CCEeeEEeeeeecccc
Q psy9697           3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWY---------------GGRAYNIFIRKRDDNK   57 (128)
Q Consensus         3 W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~---------------~~~v~hy~I~~~~~k~   57 (128)
                      ||. +|+|+||-.||++.+-|+|+||||.+ .|.|-|.|.-               +.-|+||-|....-+.
T Consensus       214 WYKP~isREQAIalLrdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGV  285 (483)
T KOG1930|consen  214 WYKPNISREQAIALLRDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGV  285 (483)
T ss_pred             ccCCCCCHHHHHHHhhcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCce
Confidence            997 89999999999888889999999998 9999888754               1359999998664433

>KOG3751|consensus

Probab=98.41  E-value=5.6e-08  Score=79.65  Aligned_cols=90  Identities=23%  Similarity=0.396  Sum_probs=70.1

Q ss_pred             CCCC-CCCHHHHHHhH-hcC-CcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccc---cccc---cCCCHHHHHH
Q psy9697           2 AWFH-SVNRERAVQMV-AAG-GEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNK---IGLG---TFKPNEVMAA   71 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll-~~~-~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~---i~~n---~~L~~~~r~~   71 (128)
                      .||| +|+|+++..+| +.+ .||.|++|+|.+ |..|++++.+..+|+||+|.-...+.   +..+   +.+++.  .+
T Consensus       520 ~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~--~q  597 (622)
T KOG3751|consen  520 TWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFSDL--IQ  597 (622)
T ss_pred             cCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCcccccc--cc
Confidence            6998 89999999988 444 789999999987 88899999999999999998654422   2222   222222  55


Q ss_pred             HHHhhcCCCCCCCcccCCcccc
Q psy9697          72 REDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        72 ~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +.+++.++++-.|+.++.+|..
T Consensus       598 l~~~~ql~k~~l~~al~~~~~r  619 (622)
T KOG3751|consen  598 LVEFYQLNKGVLPCALKHCCER  619 (622)
T ss_pred             ccchhhcCCCcchHHHHHHHHh
Confidence            6667889999999999998864

>PTZ00218 40S ribosomal protein S29; Provisional

Probab=98.38  E-value=1.5e-07  Score=55.14  Aligned_cols=32  Identities=22%  Similarity=0.519  Sum_probs=29.1

Q ss_pred             ccCCcccccCCCCccccccC--CCHHHHHHhhcc
Q psy9697          86 RTQPRCVITSRPRGVVLRWR--LSRIMFRHLADY  117 (128)
Q Consensus        86 rl~nrC~~tgr~~g~~~~~~--l~R~~fr~~~~~  117 (128)
                      +-.++|..||+++|++++|+  +||++|||.|..
T Consensus        14 kGsr~C~vCg~~~gliRkygL~~CRqCFRe~A~~   47 (54)
T PTZ00218         14 KGSRQCRVCSNRHGLIRKYGLNVCRQCFRENAEL   47 (54)
T ss_pred             CCCCeeecCCCcchhhhhcCcchhhHHHHHhhHh
Confidence            34588999999999999999  999999999975

>KOG3601|consensus

Probab=98.31  E-value=1.5e-07  Score=69.36  Aligned_cols=57  Identities=16%  Similarity=0.271  Sum_probs=51.0

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccc
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKI   58 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i   58 (128)
                      +||+ .|+|..||++|....+|.|++|.++. +|+|++++.+...|+|+++-+-+- +++
T Consensus        59 ~wve~~i~r~~ae~~l~~~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~  118 (222)
T KOG3601|consen   59 EWVEGLIPRPLAEDLLSKKRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYF  118 (222)
T ss_pred             cceecccccchhhhhhhccCcchhhhhhhhcCcccccccccCCCCceeccccccCccccc
Confidence            7998 79999999999668999999999987 999999999999999999886654 553

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=96.96  E-value=0.0027  Score=47.59  Aligned_cols=53  Identities=26%  Similarity=0.363  Sum_probs=39.0

Q ss_pred             CCCCCCCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEe-CCEeeEEeeeee
Q psy9697           1 MAWFHSVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWY-GGRAYNIFIRKR   53 (128)
Q Consensus         1 ~~W~~~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~-~~~v~hy~I~~~   53 (128)
                      +|-|++++-.+||+.|.....|.++||+|+. ....++|..- ++...|+.|.-.
T Consensus        38 HP~F~n~~~~qAe~~L~~~~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~   92 (220)
T PF14633_consen   38 HPLFKNFNYKQAEEYLADQDVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEE   92 (220)
T ss_dssp             STTEESS-HHHHHHHHCCS-TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCccCCCHHHHHHHHhcCCCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEEC
Confidence            4667899999999999777779999999987 4557788755 566779988744

>KOG3506|consensus

Probab=94.69  E-value=0.009  Score=35.00  Aligned_cols=31  Identities=23%  Similarity=0.486  Sum_probs=26.9

Q ss_pred             cCCcccccCCCCccccccC--CCHHHHHHhhcc
Q psy9697          87 TQPRCVITSRPRGVVLRWR--LSRIMFRHLADY  117 (128)
Q Consensus        87 l~nrC~~tgr~~g~~~~~~--l~R~~fr~~~~~  117 (128)
                      -...|..|+.-+|++++||  +||.+||+.|..
T Consensus        17 GsrsC~vCsn~~gLIrKYGL~vcr~cfr~~a~d   49 (56)
T KOG3506|consen   17 GSRSCRVCSNRHGLIRKYGLNVCRQCFREYAND   49 (56)
T ss_pred             CCcceeeeccchhHHHHhhhHHhHHHHHhhccc
Confidence            3466999999999999988  799999998865

>KOG1856|consensus

Probab=90.99  E-value=0.39  Score=43.65  Aligned_cols=53  Identities=25%  Similarity=0.354  Sum_probs=41.4

Q ss_pred             CCCCCCCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeC-CEeeEEeeeee
Q psy9697           1 MAWFHSVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYG-GRAYNIFIRKR   53 (128)
Q Consensus         1 ~~W~~~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~-~~v~hy~I~~~   53 (128)
                      +|-|++++=+|||.+|..-..|-++||+|+. ....|++..-. +.-.|+.|+-.
T Consensus      1108 HP~F~n~n~eQAe~yL~~~d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~ 1162 (1299)
T KOG1856|consen 1108 HPLFKNLNAEQAEAYLSDMDQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQEL 1162 (1299)
T ss_pred             CccccCCCHHHHHHHHHhcccccEEeccccCCCCceEEEEEecCchhhhhhhhhh
Confidence            4788999999999999777789999999987 45567776554 44467777643

>KOG3697|consensus

Probab=83.56  E-value=0.53  Score=36.81  Aligned_cols=37  Identities=5%  Similarity=-0.047  Sum_probs=31.4

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEE
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTL   39 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv   39 (128)
                      ||||+ .+++..+++.|  ..+|.|+++.+.. ++.+.|+=
T Consensus       201 ~pp~~g~l~~~~~q~~l--~~~a~~~a~~~~~~p~~~~ls~  239 (345)
T KOG3697|consen  201 MPPPGGFLDTRLKQRPL--APDAAQFAGKEQTYPQGRHLSD  239 (345)
T ss_pred             CCCCCCccchhhhhccC--CcccchhhhhccCCcccccccc
Confidence            79999 89999999998  3468999999987 78887775

>TIGR01764 excise DNA binding domain, excisionase family

Probab=83.52  E-value=1.1  Score=24.25  Aligned_cols=24  Identities=13%  Similarity=0.012  Sum_probs=21.4

Q ss_pred             cccCCCHHHHHHhhccCCCCceEe
Q psy9697         102 LRWRLSRIMFRHLADYNKLSGVQR  125 (128)
Q Consensus       102 ~~~~l~R~~fr~~~~~G~~~gv~k  125 (128)
                      +.+++|+..+++++..|.||.++.
T Consensus         9 ~~lgis~~ti~~~~~~g~i~~~~~   32 (49)
T TIGR01764         9 EYLGVSKDTVYRLIHEGELPAYRV   32 (49)
T ss_pred             HHHCCCHHHHHHHHHcCCCCeEEe
Confidence            568999999999999999999864

An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	128
1p6g_N	100	Real Space Refined Coordinates Of The 30s Subunit F		2e-05
1vs5_N	101	Crystal Structure Of The Bacterial Ribosome From Es		2e-05
3fih_N	96	Ternary Complex-Bound E.Coli 70s Ribosome. This Ent		2e-05
2gy9_N	61	Structure Of The 30s Subunit Of A Pre-Translocation		4e-05

>pdb|1P6G|N Chain N, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome Length = 100

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PRDS P R + RC  T RP G + ++ LSRI  R  A   ++ G+++A W
Sbjct: 51  PRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 100

>pdb|1VS5|N Chain N, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 101

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PRDS P R + RC  T RP G + ++ LSRI  R  A   ++ G+++A W
Sbjct: 52  PRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 101

>pdb|3FIH|N Chain N, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. Length = 96

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PRDS P R + RC  T RP G + ++ LSRI  R  A   ++ G+++A W
Sbjct: 47  PRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 96

>pdb|2GY9|N Chain N, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 Length = 61

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 79  PRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           PRDS P R + RC  T RP G + ++ LSRI  R  A   ++ G+++A W
Sbjct: 12  PRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 61

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	128
3r8n_N	100	30S ribosomal protein S14; protein biosynthesis, R	3e-12
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	5e-11
3bbn_N	100	Ribosomal protein S14; small ribosomal subunit, sp	7e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-06
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	7e-10
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	1e-09
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	1e-09
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	1e-09
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	1e-09
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	2e-09
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	2e-09
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	6e-09
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-07
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	6e-09
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	7e-09
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	8e-09
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	9e-09
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	1e-08
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	1e-08
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	2e-05
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	2e-08
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	1e-07
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	2e-08
2dly_A	121	FYN-related kinase; BRK family kinase, structural	2e-08
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	2e-08
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	3e-08
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	4e-08
2vqe_N	61	30S ribosomal protein S14 type Z; tRNA-binding, rR	4e-08
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	4e-08
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	5e-08
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	5e-08
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	6e-08
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	2e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-08
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	8e-08
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	8e-08
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	8e-08
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	9e-08
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	1e-07
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	3e-07
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	4e-07
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	6e-07
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	8e-07
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	9e-07
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	1e-06
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	1e-06
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	2e-06
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	2e-06
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	2e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-06
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	3e-06
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	3e-06
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	5e-06
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	5e-06
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-06
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	6e-06
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	8e-06
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	1e-05
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	1e-05
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	1e-05
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	4e-05
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	6e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-05
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	9e-05
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	1e-04
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	2e-04

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 55.3 bits (133), Expect = 5e-11
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 3  WFH-SVNRERAVQMVAAGG-EGCFLVRPSSS---SEPLTLTLWYGGRAYNIFIRKRDDNK 57
          W+  + +R+ A + +     +G FL+R SS     +P TL  ++  R YNI +R  +  K
Sbjct: 25 WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATK 84

>3bbn_N Ribosomal protein S14; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} Length = 100

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 65  PNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQ 124
            ++         + PR+S P R   RC +T RPR  +  + LS  + R +     L G  
Sbjct: 37  LSDKWEIHGKLQSPPRNSAPARLHRRCFLTGRPRANIRDFGLSGHILREMVHTCLLPGAT 96

Query: 125 RAMW 128
           R+ W
Sbjct: 97  RSSW 100

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 54.6 bits (131), Expect = 5e-10
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 3/100 (3%)

Query: 3   WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIG 59
           W+H S+ RE A + + +G   +G FL+RP        L+L YG   Y+  I +    K  
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYC 222

Query: 60  LGTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRG 99
           +      + +    +      D      +  C  +S    
Sbjct: 223 IPEGTKFDTLWQLVEYLKLKADGLIYCLKEACPNSSASNA 262

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
          + +F+ S++R  A + +   G  +G FL+R    S     L+L +  R ++  I ++ + 
Sbjct: 8  LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNG 67

Query: 57 K 57
           
Sbjct: 68 T 68

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 51.9 bits (125), Expect = 7e-10
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
            WFH +++RE A  ++ +   G FL+R S S    TL+        +  ++  DD  
Sbjct: 16 PEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGT 73

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 51.5 bits (124), Expect = 1e-09
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDNKIG 59
          W+   ++RE   + +    +G FLVR +S+      TLTL  GG    I I  R D K G
Sbjct: 13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR-DGKYG 71

Query: 60 LGT 62
             
Sbjct: 72 FSD 74

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 51.5 bits (124), Expect = 1e-09
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
           +W+H  V+R  A  ++++   G FLVR S SS   L+++L Y GR Y+  I    D K
Sbjct: 16 HSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGK 74

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 50.7 bits (122), Expect = 1e-09
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSS-EPLTLTLWYGGRAYNIFIRKRDDNK 57
           +W+H  V+R  A  ++++G  G FLVR S SS    +++L Y GR Y+  I    D K
Sbjct: 5  HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGK 63

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 50.7 bits (122), Expect = 1e-09
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
          M WFH  + RE+A +++     G FLVR S++  P   TL +   G+  +  I     
Sbjct: 8  MPWFHGKITREQAERLLYPPETGLFLVRESTNY-PGDYTLCVSSDGKVEHYRIMYHAS 64

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
          M WFH  ++ + AVQ +    +G FLVR S+   P    L + +G    +  +  RD 
Sbjct: 5  MPWFHGKISGQEAVQQLQPPEDGLFLVRESARH-PGDYVLCVSFGRDVIHYRVLHRDG 61

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 50.2 bits (120), Expect = 2e-09
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 2  AWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          +W+   ++R+ AV ++     G FLVR SS+S     L++    R  +  I       
Sbjct: 1  SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRP 58

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 51.8 bits (123), Expect = 6e-09
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
          W+   ++RE   + +    +G FLVR +S+      TLTL  GG    I I  RD 
Sbjct: 12 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDG 67

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 3   WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
           W   S NR +A  ++    +G FLVR SS       ++   G   +  I K     
Sbjct: 303 WNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGY 358

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 49.2 bits (118), Expect = 6e-09
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 3  WFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          W H ++ R +A ++++  G +G FLVR S S      L + Y    Y   I   +D+K
Sbjct: 12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDK 69

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 49.2 bits (118), Expect = 7e-09
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
            WFH  ++RE + +++   G  +G FLVR S  + P    L+L +  +  +  I   ++
Sbjct: 14 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRN-PQGFVLSLCHLQKVKHYLILPSEE 72

Query: 56 N 56
           
Sbjct: 73 E 73

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 48.8 bits (117), Expect = 8e-09
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
            WFH  ++RE + +++   G  +G FL+R S S+ P    LTL +  +  N  I   +D
Sbjct: 5  QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSN-PKAFVLTLCHHQKIKNFQILPCED 63

Query: 56 NKIGLGTFKPNEV 68
          +     +      
Sbjct: 64 DGQTFFSLDDGNT 76

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 3  WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          WF   ++R  AV+ + A G   G FL+R S        L++       +  I +R   +
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGR 62

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 48.8 bits (117), Expect = 1e-08
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
            W   S NR +A  ++    +G FLVR SS       ++   G   +  I K     
Sbjct: 10 KTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGY 67

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 49.9 bits (119), Expect = 1e-08
 Identities = 24/126 (19%), Positives = 37/126 (29%), Gaps = 17/126 (13%)

Query: 1   MAWFH------SVNRERAVQM------VAAGGEGCFLVRPSSSSEPL-TLTLWYGGRAYN 47
             WFH         R  A ++           +G FLVR S +     TL+ W  G+  +
Sbjct: 4   EKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQH 63

Query: 48  IFIRKRDDNKIGLGTFKPNEVMAAREDATNH----PRDSHPCRTQPRCVITSRPRGVVLR 103
             I  R D          N V  +  D   H    P   +    +    +          
Sbjct: 64  CRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESKE 123

Query: 104 WRLSRI 109
           W  + +
Sbjct: 124 WYHASL 129

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 3   WFH-SVNRERAVQM-VAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRK 52
           W+H S+ R +A  M +    +G FLVR  +      ++    G+  +  +++
Sbjct: 124 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQ 175

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 3   WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
           W+H S+ RE A + + +G   +G FL+RP        L+L YG   Y+  I +    K
Sbjct: 161 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGK 218

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
          + +F+ S++R  A + +   G  +G FL+R    S     L+L +  R ++  I ++ + 
Sbjct: 6  LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNG 65

Query: 57 K 57
           
Sbjct: 66 T 66

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 48.5 bits (116), Expect = 2e-08
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
            WFH  ++R+ A +++   G  +G FLVR S S+     L++ +G +  +  I   +D+
Sbjct: 26 QPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDD 85

Query: 57 K 57
           
Sbjct: 86 G 86

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 1  MAWFH-SVNRERAVQ--MVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
            WF  ++ R  A +  + +    G FL+R S S      +L++   G   +  IR+ D+
Sbjct: 16 EPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQ-KGDFSLSVLDEGVVKHYRIRRLDE 74

Query: 56 NK 57
            
Sbjct: 75 GG 76

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          +A +H  ++RE   +++ A G +G +L+R S S      L + Y G  Y   + + +   
Sbjct: 4  VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGS 63

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 47.2 bits (113), Expect = 3e-08
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDNK 57
          WFH  ++R +A  ++     G F++R S SS P   ++++ +     +  + +     
Sbjct: 11 WFHEGLSRHQAENLLMGKDIGFFIIRASQSS-PGDFSISVRHEDDVQHFKVMRDTKGN 67

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 47.6 bits (114), Expect = 4e-08
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 1  MAWFH-SVNRERAVQM-VAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKI 58
            W++  ++R  A  M +    +G FL+R    ++   +T    G+  +  I  RD    
Sbjct: 19 KPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARGKVKHCRIN-RDGRHF 77

Query: 59 GLGT 62
           LGT
Sbjct: 78 VLGT 81

>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ... Length = 61

 Score = 46.1 bits (110), Expect = 4e-08
 Identities = 18/47 (38%), Positives = 22/47 (46%)

Query: 82  SHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
               R   RCV   R R V   + L RI  R LA   +L GV++A W
Sbjct: 15  KFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 61

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 48.9 bits (116), Expect = 4e-08
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 1   MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
             W+   +NR +A +M++   +G FL+R SS       ++   G   +  I +     
Sbjct: 194 RTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRTATGF 251

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDN 56
          MAWF   + R +A +M++     G FL+R S S+ P   +L++ +G    +  + +    
Sbjct: 3  MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA-PGDFSLSVKFGNDVQHFKVLRDGAG 61

Query: 57 K 57
          K
Sbjct: 62 K 62

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 46.5 bits (111), Expect = 5e-08
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          + ++H  + +     ++  GG +G FL+R S S    L L + +    Y+  I +     
Sbjct: 3  LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGY 62

Query: 58 IGLGT 62
            + T
Sbjct: 63 YRIET 67

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 48.4 bits (115), Expect = 6e-08
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
          + +F  ++ RE A   +  GG  +G +L+R S +      L++ +G +A++  I +  + 
Sbjct: 5  LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNG 64

Query: 57 K 57
           
Sbjct: 65 T 65

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 3   WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
           WFH  ++RE + Q+V  G    G FL+R   ++    L L + G+  +  I K    K
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGK 217

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 1   MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
            +W+H  V+R  A  ++++G  G FLVR S SS    +++L Y GR Y+  I    D K
Sbjct: 105 HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGK 163

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 46.1 bits (110), Expect = 8e-08
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDNK 57
           AW+   V+R+ A   +     G FLVR SS+  P    L++    R  +  I    + +
Sbjct: 19 SAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTC-PGDYVLSVSENSRVSHYIINSLPNRR 77

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 46.6 bits (111), Expect = 8e-08
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          +A +H  ++RE   +++ A G +G +L+R S S      L + Y G  Y   + + +   
Sbjct: 4  VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGS 63

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 46.5 bits (111), Expect = 8e-08
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDN 56
            WF   + R +A +M++     G FL+R S S+ P   +L++ +G    +  + +    
Sbjct: 6  HPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA-PGDFSLSVKFGNDVQHFKVLRDGAG 64

Query: 57 K 57
          K
Sbjct: 65 K 65

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 46.1 bits (110), Expect = 9e-08
 Identities = 10/63 (15%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
            WF  ++ R++   ++ +   G +L+R   +      +++ +     +I +    DN I
Sbjct: 16 YPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVV-EKDNWI 74

Query: 59 GLG 61
           + 
Sbjct: 75 HIT 77

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDN 56
            WFH  ++++ A  ++   G+   FLVRPS ++ P   +L            I    +N
Sbjct: 16 KIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT-PGDYSLYFRTNENIQRFKICPTPNN 74

Query: 57 K 57
          +
Sbjct: 75 Q 75

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 1  MAWFH-SVNRERA---VQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRD 54
            WFH  ++R +A   V     G  G FLVR S +       LT  + G+A ++ +    
Sbjct: 9  YPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETR-RGECVLTFNFQGKAKHLRLSLNA 67

Query: 55 DNK 57
            +
Sbjct: 68 AGQ 70

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 45.6 bits (108), Expect = 4e-07
 Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
           +   +++  A  ++    EG FL+R S+  +   +++     R+ +  I  + ++    
Sbjct: 36 CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE-QWNHNFSF 94

Query: 61 GTFKP 65
              P
Sbjct: 95 DAHDP 99

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDD 55
            W+   + R  A  ++A   +G FLVR           +++ Y     +I I   + 
Sbjct: 26 HLWYAGPMERAGAESILANRSDGTFLVRQRVKD-AAEFAISIKYNVEVKHIKIMTAEG 82

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 43.4 bits (103), Expect = 8e-07
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 1  MAWFH-SVNRERAVQM-VAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
            WFH ++    A  + +  G +G FL RPS S+    TL++   G   +I I+   D 
Sbjct: 7  RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDY 65

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 43.4 bits (103), Expect = 9e-07
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 8/70 (11%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSEPLTLTLWY------GGRAYNIFIRK 52
            WF  +++R ++ Q++   G EG F+VR SS     T++L+        G   +  +  
Sbjct: 11 YDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHT 70

Query: 53 RDDNKIGLGT 62
            +NK+ L  
Sbjct: 71 NAENKLYLAE 80

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 43.7 bits (103), Expect = 1e-06
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          W+   ++R++A+ ++     G FL+R S S +    L L       +    K D  +
Sbjct: 22 WYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVE 78

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSEPLTLTLWYGGRAYNIF------IRK 52
            W+H ++ R +A  ++     EG F+VR S      T++++ G R           I+K
Sbjct: 16 YEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKK 75

Query: 53 RDDNK 57
           D  +
Sbjct: 76 NDSGQ 80

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSEPLTLTLWY------GGRAYNIFIRK 52
            W+   + R +A Q++   G EG F+VR SS +   T++++        G   +  +  
Sbjct: 11 YEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCS 70

Query: 53 RDDNKIGLG 61
             ++  L 
Sbjct: 71 TPQSQYYLA 79

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
          W+  S+    A + +    EG FL+R SS S+  LT+++       N+ I    D K  L
Sbjct: 19 WYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIE-YQDGKFRL 77

Query: 61 GT 62
           +
Sbjct: 78 DS 79

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 1  MAWFH-SVNRERAVQM-VAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYN 47
            W++ S++R++A ++ +  G EG F+VR S +    T++++       
Sbjct: 9  YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISE 57

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRD 54
            W+H ++ R    +++     G FLVR S   +   L++ + G   +  I+  D
Sbjct: 13 QLWYHGAIPRAEVAELLVH--SGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLD 65

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 3  WFH-SVNRERAVQM-VAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN-KI 58
          W++ +V R +A       G EG FL+R S SS    +++L   G+  +  ++  D+   I
Sbjct: 7  WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 66

Query: 59 GLGTF 63
          G   F
Sbjct: 67 GQRRF 71

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 42.9 bits (101), Expect = 3e-06
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPL-TLTLWYGGRAYNIFIRKRDDN 56
            W+   + R  A   +A   +G FLVR SS    L +L+    G+  +  I   +  
Sbjct: 24 QGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGR 81

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 41.5 bits (98), Expect = 5e-06
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 9/66 (13%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIF-----IR 51
            WF  +++R+ A + + A G   G FL+R S S+    +L++    +          IR
Sbjct: 4  EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIR 63

Query: 52 KRDDNK 57
            D+  
Sbjct: 64 NLDNGG 69

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPL-TLTLWYGGRAYNIFIRKRDDN 56
          ++  +V    A  +++A   G FL+R SS      TL++       N+ I+    +
Sbjct: 25 FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGS 80

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 41.6 bits (98), Expect = 6e-06
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDD 55
            W+H ++ R    +++     G FLVR S   +   L++ + G   +  I+  D+
Sbjct: 16 QLWYHGAIPRAEVAELLVH--SGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDN 69

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 41.9 bits (98), Expect = 6e-06
 Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 8/113 (7%)

Query: 3   WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPL-TLTLWYGGRAYNIFIRKRDDNKIGL 60
           ++  +V    A  +++A   G FL+R SS      TL++       N+ I+  +     L
Sbjct: 36  FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQ-XEGGSFSL 94

Query: 61  GTFKPNEVMAAR----EDATNHPRDSHPC-RTQPRCVITSRPRGVVLRWRLSR 108
            +   +     R        +H         + P+        G  +   LSR
Sbjct: 95  QSDPRSTQPVPRFDXVLKLVHHYMPPQALPGSTPKRAYYIYSGGEKIPLVLSR 147

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 42.7 bits (99), Expect = 8e-06
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 2/113 (1%)

Query: 3   WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDNKIGL 60
           W+   V+R+ A   +     G FLVR SS+      L++    R  +  I    + +  +
Sbjct: 14  WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 73

Query: 61  GTFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRH 113
           G  + + + A  E    H  D+           +     V      +      
Sbjct: 74  GDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNLE 126

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 1  MAWFHS--VNRERAVQM------VAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIR 51
            WFH    +R  A ++           +G FLVR S +     TL+ W  GR  +  IR
Sbjct: 22 EKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIR 81

Query: 52 KRDDNKIG 59
             +N + 
Sbjct: 82 STMENGVM 89

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 9/66 (13%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTL-----WYGGRAYNIFIR 51
            W+   + R+ A + + + G   G FL+R S +++   +L++       G    +  IR
Sbjct: 5  EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 64

Query: 52 KRDDNK 57
          K D+  
Sbjct: 65 KLDNGG 70

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRD 54
            WFH  ++R  A  ++     G FLVR S+++     LT    G+  ++ +   +
Sbjct: 7  EPWFHGKLSRREAEALLQL--NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE 60

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 40.3 bits (93), Expect = 4e-05
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSS-EPLTLTLWYGGRAYNIFIRKRDDNK 57
           +W+   ++R+ AV ++     G FLVR SS+S     L++    R  +  I       
Sbjct: 13 SSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRP 71

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEPLTLTLWYGGRAYNIF---IRKRDD 55
          M     +V+R+ A +M+      G  ++RP S S   ++T+        I    +     
Sbjct: 15 MPACFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQ 74

Query: 56 N 56
          N
Sbjct: 75 N 75

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 1   MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDD 55
           M WFH  + RE+A +++     G FLVR S++     TL +   G+  +  I     
Sbjct: 80  MPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHAS 136

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 38.5 bits (90), Expect = 9e-05
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDD 55
            W+H ++ R  A +++    +G FLVR S        L+++  G+  +  I+  D+
Sbjct: 17 QDWYHGAIPRIEAQELL--KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDN 71

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 4/130 (3%)

Query: 3   WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDNKIGL 60
           W+   ++R+ AV ++     G FLVR SS+S     L++    R  +  I          
Sbjct: 13  WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 72

Query: 61  GT--FKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYN 118
            +    P  V  +R    +   DS P   +   +       ++     SR     +    
Sbjct: 73  PSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQE 132

Query: 119 KLSGVQRAMW 128
           +   V+    
Sbjct: 133 EAEYVRALFD 142

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 10/66 (15%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTL------WYGGRAYNIFIR 51
            WF  +++R+ A + + A     G FL+R  S S     +L        G    +  IR
Sbjct: 12 EKWFFRTISRKDAERQLLAPMNKAGSFLIRE-SESNKGAFSLSVKDITTQGEVVKHYKIR 70

Query: 52 KRDDNK 57
            D+  
Sbjct: 71 SLDNGG 76

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	128
3r8n_N	100	30S ribosomal protein S14; protein biosynthesis, R	99.96
3bbn_N	100	Ribosomal protein S14; small ribosomal subunit, sp	99.95
2vqe_N	61	30S ribosomal protein S14 type Z; tRNA-binding, rR	99.88
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.88
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.87
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.86
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.86
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.86
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.85
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.84
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.84
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.84
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.84
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.84
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.83
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.83
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.83
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.83
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.82
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.82
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.82
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.82
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.82
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.82
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.82
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.82
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.82
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.81
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.81
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.81
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.81
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.81
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.8
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.8
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.8
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.8
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.79
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.79
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.79
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.78
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.78
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.78
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.77
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.77
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.77
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.77
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.76
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.76
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.75
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.75
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.75
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.75
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.75
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.74
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.74
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.74
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.73
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.73
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.73
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.72
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.72
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.71
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.71
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.71
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.71
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.7
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.69
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.68
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.66
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.66
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.65
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.64
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.63
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.63
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.63
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.63
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.43
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.58
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.58
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.58
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.53
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.51
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.5
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.48
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.43
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.34
2xzm_N	55	RPS29E; ribosome, translation; 3.93A {Tetrahymena	99.19
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.02
3j20_P	56	30S ribosomal protein S14P type Z; archaea, archae	98.95
3iz6_N	56	40S ribosomal protein S29 (S14P); eukaryotic ribos	98.85
3u5c_d	56	S36, YS29, 40S ribosomal protein S29-A; translatio	98.78
1uur_A	473	Stata protein, STAT protein; transcription activat	98.09
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	97.69
1y1u_A	585	Signal transducer and activator of transcription;	97.07
1yvl_A	683	Signal transducer and activator of transcription 1	96.49
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	96.06
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	95.83
1bf5_A	575	Signal transducer and activator of transcription 1	95.72
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	94.97
3op0_A	323	Signal transduction protein CBL-C; structural geno	94.21
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	92.58
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	89.34

>3bbn_N Ribosomal protein S14; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}

Probab=99.95  E-value=1.4e-29  Score=166.05  Aligned_cols=83  Identities=23%  Similarity=0.375  Sum_probs=77.6

Q ss_pred             EeeEEeeeeecccccccccCCCHHHH--HHHHHhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCC
Q psy9697          44 RAYNIFIRKRDDNKIGLGTFKPNEVM--AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLS  121 (128)
Q Consensus        44 ~v~hy~I~~~~~k~i~~n~~L~~~~r--~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~  121 (128)
                      .|..|..++..+++++.|++ |.+++  ++++ |+++|+|++|+++.|+|+.||||+|++++|+|||++||++|+.|+||
T Consensus        16 l~~ky~~kR~~LK~~~~~~~-~~~~r~~a~~k-L~~lPRns~~~r~~nRC~~tGR~rg~~r~fglsR~~fRe~a~~g~lp   93 (100)
T 3bbn_N           16 LEQKYHLIRRSSKQEIRKVT-SLSDKWEIHGK-LQSPPRNSAPARLHRRCFLTGRPRANIRDFGLSGHILREMVHTCLLP   93 (100)
T ss_dssp             STTTTSSSTTTTTTTTSSCC-SSSCCCSHHHH-SCCSCSSCCGGGCCCCCSSSCCSSSBCTTTCSBTTHHHHHHTTTCSS
T ss_pred             HHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHH-HHhCCcccccccccccccCCCCCceeecccCcHHHHHHHHHHcCCCC
Confidence            45678888889999999988 88888  6676 99999999999999999999999999999999999999999999999


Q ss_pred             ceEeccC
Q psy9697         122 GVQRAMW  128 (128)
Q Consensus       122 gv~k~~W  128 (128)
                      ||+||||
T Consensus        94 Gv~KssW  100 (100)
T 3bbn_N           94 GATRSSW  100 (100)
T ss_dssp             SCEECCC
T ss_pred             CeeeccC
Confidence            9999999

>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...

Probab=99.88  E-value=2.1e-23  Score=125.13  Aligned_cols=52  Identities=35%  Similarity=0.563  Sum_probs=50.2

Q ss_pred             cCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCceEeccC
Q psy9697          77 NHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW  128 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv~k~~W  128 (128)
                      ..+.+++|+++.|+|..||||+|++++|+|||++|||+|..|+||||+||||
T Consensus        10 ~~~~~~~~~r~~nRC~~~GR~rg~iRkfglcR~~FRe~A~~g~lpGv~KasW   61 (61)
T 2vqe_N           10 AKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW   61 (61)
T ss_dssp             CCSCCSSGGGCCCCCTTTCCCTTCCTTTSSCHHHHHHHHHHTCSSSCEECCC
T ss_pred             hccCCCCCCCCceeeecCCCCceeeccCceeHHHHHHHHhCCccCCeEeeeC
Confidence            4677899999999999999999999999999999999999999999999999

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.88  E-value=1.4e-22  Score=132.14  Aligned_cols=88  Identities=20%  Similarity=0.239  Sum_probs=73.2

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|+...+|+||||+|++ +|.|+|||..++.|+||+|.+.+.++++.+    +++++.+.     
T Consensus         5 ~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~-----   79 (98)
T 3us4_A            5 MPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVE-----   79 (98)
T ss_dssp             CTTBCCSCCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEETTEEESSSSSEESSHHHHHH-----
T ss_pred             CcccCCCCCHHHHHHHccCCCCcEEEEEeCCCCCCcEEEEEEECCceEEEEEEEeCCEEEECCCCccCCHHHHHH-----
Confidence            68999 89999999999767899999999987 899999999999999999998766665433    34444443     


Q ss_pred             hhcCCCCCCCcccCCcccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~   93 (128)
                      +++.+.++.+++|..||.+
T Consensus        80 ~y~~~~~~l~~~L~~P~pk   98 (98)
T 3us4_A           80 HYSKDKGAICTKLVRPKRK   98 (98)
T ss_dssp             HHHHCCTTSSSCCCSBCCC
T ss_pred             HhhhCCCCCeEcCCccCCC
Confidence            6667779999999999964

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.87  E-value=2.6e-22  Score=132.67  Aligned_cols=91  Identities=23%  Similarity=0.224  Sum_probs=73.7

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|+...+|+||||+|++ +|.|+|||..++.|+||+|...+.++++.+    .++++.+.     
T Consensus         8 ~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv~-----   82 (106)
T 3eaz_A            8 MPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVE-----   82 (106)
T ss_dssp             CTTBCCSCCHHHHHHHTCSCCTTEEEEEECTTSTTCEEEEEEETTEEEEEECEEETTEEESSSSSCBSSHHHHHH-----
T ss_pred             CCCcCCCCCHHHHHHHhCCCCCCEEEEEECCCCCCcEEEEEEeCCceEEEEEEecCCEEEECCCCccCCHHHHHH-----
Confidence            68999 89999999999767899999999987 899999999999999999997766665542    33333333     


Q ss_pred             hhcCCCCCCCcccCCcccccCC
Q psy9697          75 ATNHPRDSHPCRTQPRCVITSR   96 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~tgr   96 (128)
                      +++.+.++.+++|..+|...+.
T Consensus        83 ~y~~~~~gl~~~L~~P~~~~~~  104 (106)
T 3eaz_A           83 HYTSDADGLCTRLIKPKVMEGT  104 (106)
T ss_dssp             HHHHCCTTSSSCCCEECCCC--
T ss_pred             HHhhCCCCCCeecCCcCCCCCC
Confidence            5556789999999999987653

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.86  E-value=5e-22  Score=134.95  Aligned_cols=87  Identities=15%  Similarity=0.029  Sum_probs=70.6

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEe---CCEeeEEeeeeeccccccc------ccCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWY---GGRAYNIFIRKRDDNKIGL------GTFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~---~~~v~hy~I~~~~~k~i~~------n~~L~~~~r   69 (128)
                      ||||+ +|+|.+||++| ..+.+|+||||+|+..+.|+|||++   ++.|+||+|++.+.++++.      -++|++.+.
T Consensus        15 epWff~~isR~eAE~lL~~~~~~GaFLVR~Se~~~~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV~   94 (125)
T 3maz_A           15 MPACFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVID   94 (125)
T ss_dssp             CCTTBCCCCHHHHHHHHHHCGGGCSEEEEECTTSSSEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHHH
T ss_pred             CCCCcCCCCHHHHHHHHhccCCCCcEEEEeCCCCCCEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHHH
Confidence            79998 89999999988 6667999999999874589999999   6899999999987677654      256666665


Q ss_pred             HHHHHhhcCCCCCCCcccCCccc
Q psy9697          70 AAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        70 ~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                           ++....+++.+++..+|-
T Consensus        95 -----yY~~~adGl~~~L~~~c~  112 (125)
T 3maz_A           95 -----YFVKETRGNLRPFIASTD  112 (125)
T ss_dssp             -----HHHHHTTTCCCBCCC---
T ss_pred             -----HHHhCCCcCccccccccc
Confidence                 666778999999999994

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.86  E-value=7.1e-22  Score=131.75  Aligned_cols=93  Identities=25%  Similarity=0.360  Sum_probs=72.9

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc-c---cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-G---TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n---~~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++|+.+.||+||||+|++ +|.|+|||..++.|+||+|.+... .+++. +   .++++.+.    
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~----   80 (112)
T 3k2m_A            5 HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVH----   80 (112)
T ss_dssp             STTEEESCCHHHHHHHTTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHHH----
T ss_pred             CcceeeCCCHHHHHHHhccCCCceEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHHH----
Confidence            58999 89999999999777899999999987 899999999999999999998654 44432 3   33333333    


Q ss_pred             HhhcCCCCCCCcccCCcccccCCCC
Q psy9697          74 DATNHPRDSHPCRTQPRCVITSRPR   98 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nrC~~tgr~~   98 (128)
                       +++.+.++.+++|+.+|.....|.
T Consensus        81 -~y~~~~~~l~~~L~~P~~~~~~p~  104 (112)
T 3k2m_A           81 -HHSTVADGLITTLHYPAPKRNKPT  104 (112)
T ss_dssp             -HHHHCCTTSSSCCCEECCCC----
T ss_pred             -HHhhCCCCCccCCCCCCCCCCCCC
Confidence             555678999999999999866653

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.86  E-value=1.8e-21  Score=128.19  Aligned_cols=90  Identities=20%  Similarity=0.271  Sum_probs=70.5

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc------ccCCCHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL------GTFKPNEVMA   70 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~------n~~L~~~~r~   70 (128)
                      ++||| .|+|++||++| ..+.||+||||+|++ +|.|+|||..++.|+||+|.+... .+++.      +..++..  .
T Consensus         4 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl--~   81 (104)
T 1d4t_A            4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKI--K   81 (104)
T ss_dssp             CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSH--H
T ss_pred             CceEccCCCHHHHHHHHHhcCCCCEEEEeeCCCCCCCEEEEEEECCeEEEEEEEECCCCeEEEeccCCCCCcccCCH--H
Confidence            58999 89999999999 455899999999986 899999999999999999997654 44443      2222222  2


Q ss_pred             HHHHhhcCCCCCCCcccCCccc
Q psy9697          71 AREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        71 ~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      .+.++++.+.++.+++|+.||.
T Consensus        82 ~LV~~y~~~~~~l~~~L~~P~~  103 (104)
T 1d4t_A           82 NLISAFQKPDQGIVIPLQYPVE  103 (104)
T ss_dssp             HHHHHHTSSSSSSSSCCCEECC
T ss_pred             HHHHHHhhCCCCCeEECCCcCC
Confidence            2333677778999999999985

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.85  E-value=2.1e-21  Score=127.60  Aligned_cols=87  Identities=16%  Similarity=0.222  Sum_probs=71.5

Q ss_pred             CCCCC-CCCHHHHHHhHh-cCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc------c---cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVA-AGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL------G---TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~------n---~~L~~~   67 (128)
                      ++||| .|+|++||++|. ...+|+||||+|++ +|.|+|||..++.|+||+|.+... .+++.      +   +++++.
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~L   82 (103)
T 1i3z_A            3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQEL   82 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHH
T ss_pred             CccccCCCCHHHHHHHHhhcCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHH
Confidence            58999 899999999994 46899999999987 899999999999999999997644 44333      1   455555


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      +.     +++.+.++.+++|+.||.
T Consensus        83 V~-----~y~~~~~~l~~~L~~P~~  102 (103)
T 1i3z_A           83 VS-----KYGKPGQGLVVHLSNPIM  102 (103)
T ss_dssp             HH-----HTTSSSSSSSSCCCEECC
T ss_pred             HH-----HHhhCCCCCeEEcCCccC
Confidence            54     777778999999999985

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.84  E-value=2.5e-21  Score=126.77  Aligned_cols=88  Identities=24%  Similarity=0.262  Sum_probs=71.1

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc----cCCCHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG----TFKPNEVMAA   71 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n----~~L~~~~r~~   71 (128)
                      ++||| .|+|++||++|..  +++|+||||+|++ +|.|+|||..++.|+||+|.+... ++++.+    +++++.+.  
T Consensus         2 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~--   79 (100)
T 1rja_A            2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVN--   79 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHH--
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHHH--
Confidence            68999 8999999999954  6899999999987 899999999999999999998644 444432    44444444  


Q ss_pred             HHHhhcCCCCCCCcccCCcccc
Q psy9697          72 REDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        72 ~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                         +++.+.++.+++|+.+|..
T Consensus        80 ---~y~~~~~~l~~~L~~p~~~   98 (100)
T 1rja_A           80 ---YHRAQSLSHGLRLAAPCRK   98 (100)
T ss_dssp             ---HHHHCCTTSSSCCCSBCCC
T ss_pred             ---HHhhCCCCCCCCCCccCCC
Confidence               5556667889999999975

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.84  E-value=4.8e-21  Score=126.18  Aligned_cols=88  Identities=22%  Similarity=0.266  Sum_probs=69.8

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeecc-cccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDD-NKIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~-k~i~~n----~~L~~   66 (128)
                      ++||| .|+|++||++|.  .+.+|+||||+|++ +|.|+|||+.     ++.|+||+|.+.+. ++++.+    +++++
T Consensus         4 ~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~   83 (105)
T 1lkk_A            4 EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHE   83 (105)
T ss_dssp             CTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHH
T ss_pred             CceecCCCCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCHHH
Confidence            58999 899999999994  35899999999987 8999999998     68999999998643 454432    33333


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      .+.     +++.++++.+++|+.||..
T Consensus        84 LI~-----~y~~~~~~l~~~L~~P~~~  105 (105)
T 1lkk_A           84 LVR-----HYTNASDGLCTRLSRPCQT  105 (105)
T ss_dssp             HHH-----HHHHCCTTSSSCCCSBCCC
T ss_pred             HHH-----HHhhCCCCCccCCcCcCCC
Confidence            333     5556788999999999963

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.84  E-value=1.1e-20  Score=127.77  Aligned_cols=92  Identities=20%  Similarity=0.261  Sum_probs=74.2

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec-ccccccc----cCCCHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD-DNKIGLG----TFKPNEVMAA   71 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~-~k~i~~n----~~L~~~~r~~   71 (128)
                      ++||| .|+|++||++|.  .+.||+||||+|++ +|.|+|||+.++.|+||+|.+.. .++++.+    .++++.+.  
T Consensus        16 ~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~--   93 (121)
T 2dly_A           16 EPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVN--   93 (121)
T ss_dssp             CSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEETTEEESSHHHHHH--
T ss_pred             CCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEECCCCccCCHHHHHH--
Confidence            58999 899999999994  35899999999987 89999999999999999999854 3454432    34444444  


Q ss_pred             HHHhhcCCCCCCCcccCCcccccCCC
Q psy9697          72 REDATNHPRDSHPCRTQPRCVITSRP   97 (128)
Q Consensus        72 ~~~l~~l~~~~~~~rl~nrC~~tgr~   97 (128)
                         +++.+.++.+++|+.+|.....|
T Consensus        94 ---~y~~~~~~l~~~L~~P~~~~~~~  116 (121)
T 2dly_A           94 ---YYTTTSDGLCVKLEKPCLKIQVS  116 (121)
T ss_dssp             ---HHTTCCSSSSSCCCSBCCCCCSS
T ss_pred             ---HHhhCCCCCceeCCeecCCCCCC
Confidence               77778889999999999986544

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=3.2e-21  Score=130.14  Aligned_cols=93  Identities=24%  Similarity=0.320  Sum_probs=74.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc-cc---CCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-GT---FKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n~---~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++|+...+|+||||+|++ +|.|+|||+.++.|+||+|.+... ++++. +.   ++++.+.    
T Consensus        16 ~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~----   91 (119)
T 2ecd_A           16 HSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVH----   91 (119)
T ss_dssp             SSSEEEECCHHHHHHHHHTSCTTBEEEEEESSSTTEEEEEEECSSCEEEECCCCCSSSCCCCCSSCCCSSHHHHHH----
T ss_pred             CccccCCCCHHHHHHHhcCCCCCeEEEEeCCCCCCCEEEEEEECCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHH----
Confidence            58999 89999999999777899999999987 899999999999999999997644 44432 33   3333333    


Q ss_pred             HhhcCCCCCCCcccCCcccccCCCC
Q psy9697          74 DATNHPRDSHPCRTQPRCVITSRPR   98 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nrC~~tgr~~   98 (128)
                       ++....++.+++|+.+|.....|.
T Consensus        92 -~y~~~~~gl~~~L~~P~~~~~~p~  115 (119)
T 2ecd_A           92 -HHSTVADGLVTTLHYPAPKCNKSG  115 (119)
T ss_dssp             -HHHHCCTTSSSCCCBCCSSCCSSC
T ss_pred             -HHhhCCCCCceECCCccCCCCCCC
Confidence             444567899999999999876664

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.84  E-value=1.2e-20  Score=124.44  Aligned_cols=88  Identities=24%  Similarity=0.343  Sum_probs=68.8

Q ss_pred             CCCCC-CCCHHHHHHhHh-c-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec-cc--cc-cc--c---cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVA-A-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD-DN--KI-GL--G---TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~-~k--~i-~~--n---~~L~~~   67 (128)
                      ++||| .|+|++||++|. . +++|+||||+|++ +|.|+|||..++.|+||+|.+.. .+  ++ +.  .   +++++.
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~L   84 (105)
T 1nrv_A            5 QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQL   84 (105)
T ss_dssp             STTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHH
T ss_pred             CcccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEeCCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHH
Confidence            58999 899999999994 3 3899999999987 89999999999999999998753 22  33 32  2   333333


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +.     +++.+.++.+++|+.+|..
T Consensus        85 V~-----~y~~~~~~l~~~L~~p~~r  105 (105)
T 1nrv_A           85 VD-----FYQLNKGVLPCKLKHHCIR  105 (105)
T ss_dssp             HH-----HHTTCCTTSSSCCCEECCC
T ss_pred             HH-----HhhhCCCCCcEeCCCcCCC
Confidence            33     7777889999999999963

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.83  E-value=2e-20  Score=127.67  Aligned_cols=90  Identities=22%  Similarity=0.282  Sum_probs=72.7

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc------c---cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL------G---TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~------n---~~L~~~   67 (128)
                      ++||| .|+|++||++| ..+.+|+||||+|++ +|.|+|||+.++.|+||+|.+... .+++.      +   .++++.
T Consensus         4 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~L   83 (128)
T 1ka6_A            4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNL   83 (128)
T ss_dssp             CSSBCCSCCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEESSSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHH
T ss_pred             CcccCCCCCHHHHHHHHhcCCCCCEEEEeecCCCCCCEEEEEEeCCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHH
Confidence            58999 89999999999 456899999999986 899999999999999999997654 44443      2   333334


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccccC
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~tg   95 (128)
                      +.     +++.+.++.+++|+.+|....
T Consensus        84 V~-----~y~~~~~gl~~~L~~P~~~~~  106 (128)
T 1ka6_A           84 IS-----AFQKPDQGIVIPLQYPVEKKS  106 (128)
T ss_dssp             HH-----HTTSSCSSSSSCCCSBCCSSC
T ss_pred             HH-----HHhhCCCCCcEEcCCcCCCCC
Confidence            43     777778899999999998643

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.83  E-value=1.7e-20  Score=125.79  Aligned_cols=88  Identities=23%  Similarity=0.351  Sum_probs=69.4

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeee-cc-c-cccc---c---cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKR-DD-N-KIGL---G---TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~-~~-k-~i~~---n---~~L~~~   67 (128)
                      ++||| .|+|++||++|..  +.+|+||||+|++ +|.|+|||+.++.|+||+|.+. .. + ++..   .   .++++.
T Consensus        14 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~L   93 (117)
T 3pqz_A           14 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQL   93 (117)
T ss_dssp             CTTBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEETTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHH
T ss_pred             CccccCCCCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEeCCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHH
Confidence            58999 8999999999943  4699999999998 8999999999999999999975 33 3 2321   2   333333


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +.     +++.+.++.+++|..+|..
T Consensus        94 V~-----~y~~~~~~l~~~L~~P~~~  114 (117)
T 3pqz_A           94 VE-----FHQLNRGILPCLLRHCCTR  114 (117)
T ss_dssp             HH-----HHHHCCTTSSSCCCEECC-
T ss_pred             HH-----HHhhCCCCCcEECCCcCcc
Confidence            33     6667789999999999975

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.83  E-value=2.1e-20  Score=125.95  Aligned_cols=95  Identities=21%  Similarity=0.284  Sum_probs=73.9

Q ss_pred             CCCCC-CCCHHHHHHhHhc-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc------cCCCHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG------TFKPNEVMA   70 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n------~~L~~~~r~   70 (128)
                      ++||| .|+|++||++|.. ..+|+||||+|++ +|.|+|||+.++.|+||+|.+... ++++..      ..++..  .
T Consensus        10 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl--~   87 (119)
T 2ysx_A           10 PCWNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKL--D   87 (119)
T ss_dssp             CSSEEESCCHHHHHHHHHHHCCTTEEEEEECSSCTTSEEEEEECSSCEEEEEEEECTTSCEEECCSCSSSCCCBSSH--H
T ss_pred             CccccCCCCHHHHHHHHhhcCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeccCCcCCcccCCH--H
Confidence            58999 8999999999944 7999999999987 899999999999999999997644 444432      122222  2


Q ss_pred             HHHHhhcCCCCCCCcccCCcccccCCC
Q psy9697          71 AREDATNHPRDSHPCRTQPRCVITSRP   97 (128)
Q Consensus        71 ~~~~l~~l~~~~~~~rl~nrC~~tgr~   97 (128)
                      .+.++++.+.++.+++|+.+|.....+
T Consensus        88 eLV~~y~~~~~~l~~~L~~P~~~~~~~  114 (119)
T 2ysx_A           88 QLIEFYKKENMGLVTHLQYPVPLEEED  114 (119)
T ss_dssp             HHHHHTTSSSSSSSSCCCEECCCCCCC
T ss_pred             HHHHHHhhCCCCCCeECCCcCCCCCCC
Confidence            233377777889999999999876544

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.83  E-value=1.1e-20  Score=125.58  Aligned_cols=90  Identities=19%  Similarity=0.262  Sum_probs=67.7

Q ss_pred             CCCCC-CCCHHHHHHhHh-cCCcccEEEeeCCCCCCEEEEEEe------CCEeeEEeeeeecc-ccccc-ccCCCHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVA-AGGEGCFLVRPSSSSEPLTLTLWY------GGRAYNIFIRKRDD-NKIGL-GTFKPNEVMA   70 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~~~~G~FlvR~s~~~~~~~lsv~~------~~~v~hy~I~~~~~-k~i~~-n~~L~~~~r~   70 (128)
                      ++||| .|+|++||++|. .+.+|+||||+|+.+|.|+|||+.      ++.|+||+|.+... ++++. +..++...  
T Consensus        11 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~--   88 (110)
T 2ekx_A           11 YDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIP--   88 (110)
T ss_dssp             SSSBCCSCCHHHHHHHHHHTCCTTEEEEEECSSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSCHH--
T ss_pred             CCeecCCCCHHHHHHHHhccCCCceEEEEecCCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCCHH--
Confidence            58999 899999999994 448999999999558999999997      47899999998754 44443 22333222  


Q ss_pred             HHHHhhcCCCCCCCcccCCccc
Q psy9697          71 AREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        71 ~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      .+.++++.+.++.+++|+.||.
T Consensus        89 ~LV~~y~~~~~~l~~~L~~Pv~  110 (110)
T 2ekx_A           89 KLIHYHQHNSAGMITRLRHPVS  110 (110)
T ss_dssp             HHHHHHHHSCCSSSCCCCEECC
T ss_pred             HHHHHHeeCCCCCceecCccCC
Confidence            1222555666889999999884

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.82  E-value=7.8e-21  Score=125.38  Aligned_cols=88  Identities=18%  Similarity=0.217  Sum_probs=71.2

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeecc-cccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDD-NKIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~-k~i~~n----~~L~~   66 (128)
                      ++||| .|+|++||++|..  +++|+||||+|++ +|.|+|||..     ++.|+||+|.+.+. ++++.+    .++++
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~   84 (106)
T 1aot_F            5 EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQ   84 (106)
T ss_dssp             SSSCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESSHHH
T ss_pred             CccCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCCHHH
Confidence            58999 8999999999943  4899999999987 8999999997     78999999998643 444432    44444


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      .+.     +++.+.++.+++|..+|..
T Consensus        85 LV~-----~y~~~~~~l~~~L~~p~~~  106 (106)
T 1aot_F           85 LVQ-----HYSERAAGLSSRLVVPSHK  106 (106)
T ss_dssp             HHH-----HHTTCCTTSSSCSCSSCCC
T ss_pred             HHH-----HhccCCCCCcEeecccCCC
Confidence            444     7778889999999999963

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.82  E-value=5e-20  Score=123.52  Aligned_cols=91  Identities=15%  Similarity=0.196  Sum_probs=67.8

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEeC------CEeeEEeee--eecc-ccccc-ccCCCHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWYG------GRAYNIFIR--KRDD-NKIGL-GTFKPNEV   68 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~~------~~v~hy~I~--~~~~-k~i~~-n~~L~~~~   68 (128)
                      ++||| .|+|++||++| ..+++|+||||+|+.+|.|+|||..+      +.|+||+|+  +... ++++. +..++...
T Consensus         9 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl~   88 (118)
T 3s9k_A            9 YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIP   88 (118)
T ss_dssp             STTBCTTCCHHHHHHHHHHHCCTTCEEEEECSSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEECSCCCSCHH
T ss_pred             CceecCCCCHHHHHHHHHhcCCCCeEEEEeeCCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECCCcccCCHH
Confidence            58999 89999999999 55689999999994489999999997      899999994  3333 44443 22333222


Q ss_pred             HHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          69 MAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        69 r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                        .+.++++.+.++.+++|..+|..
T Consensus        89 --~LV~~y~~~~~~l~~~L~~Pv~~  111 (118)
T 3s9k_A           89 --LLIQYHQYNGGGLVTRLRYPVCG  111 (118)
T ss_dssp             --HHHHHHHHCCTTSSSCCCCCCCC
T ss_pred             --HHHHHheeCCCCCccCCCCcCCC
Confidence              12225556668999999999975

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.82  E-value=3.3e-20  Score=123.81  Aligned_cols=92  Identities=21%  Similarity=0.175  Sum_probs=69.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeeccccc-cc-c---cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKI-GL-G---TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i-~~-n---~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|....+|+||||+|+.+|.|+|||+.++.|+||+|.+.+.+++ .. .   .++++.+. .+. 
T Consensus        10 ~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~-~y~-   87 (112)
T 1h9o_A           10 KTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVL-HYQ-   87 (112)
T ss_dssp             GGTBCCSCCHHHHHHHHTTCCTTEEEEEECSSTTCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHH-HHH-
T ss_pred             CCcccCCCCHHHHHHHhcCCCCceEEEeecCCCCCEEEEEEECCEEEEEEEEEcCCceEEeCCCCCcCCHHHHHH-HHh-
Confidence            47999 89999999999777999999999944899999999999999999998876554 32 2   34444443 222 


Q ss_pred             hhcC--CCCCCCcccCCccccc
Q psy9697          75 ATNH--PRDSHPCRTQPRCVIT   94 (128)
Q Consensus        75 l~~l--~~~~~~~rl~nrC~~t   94 (128)
                      -+.+  ..++.++.|+.+|...
T Consensus        88 ~~~l~~~~~gl~~~L~~P~~~~  109 (112)
T 1h9o_A           88 HTSLVQHNDSLNVTLAYPVYAQ  109 (112)
T ss_dssp             HSCGGGTCTTCCCCCCEETTC-
T ss_pred             hCcccccCCCcCeeCCCCcCCC
Confidence            1222  3467889999999874

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=5.3e-20  Score=123.95  Aligned_cols=88  Identities=11%  Similarity=0.175  Sum_probs=68.9

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|....+|+||||+|++ +|.|+|||..++.|+||+|.+.+.++++.+    .++++.+.     
T Consensus        16 ~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV~-----   90 (118)
T 2dlz_A           16 YPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE-----   90 (118)
T ss_dssp             STTEEESCCHHHHHHHHHHSCTTBEEEECCSCSSCCEEEEEECSSSEEEEEEEEETTEEESTTSCCBSSHHHHHH-----
T ss_pred             CCceecCCCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCcEEEEEEEEcCCEEEEeCCcccCCHHHHHH-----
Confidence            58999 89999999999667999999999987 899999999999999999998766665543    33333333     


Q ss_pred             hhcCCC-----CCCCcccCCcccc
Q psy9697          75 ATNHPR-----DSHPCRTQPRCVI   93 (128)
Q Consensus        75 l~~l~~-----~~~~~rl~nrC~~   93 (128)
                      +++.+.     .+.+++|+.||..
T Consensus        91 ~y~~~~l~~~~~gl~~~L~~Pv~~  114 (118)
T 2dlz_A           91 YYQCHSLKESFKQLDTTLKYPYSG  114 (118)
T ss_dssp             HHTTSCTTTTCTTCCCCCCBCCSC
T ss_pred             HHhhCcccccCCCcccEeCCcCCC
Confidence            333333     2677889998875

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.82  E-value=1.7e-20  Score=125.34  Aligned_cols=88  Identities=22%  Similarity=0.251  Sum_probs=70.8

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEe----CCEeeEEeeeeecc-cccccc----cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWY----GGRAYNIFIRKRDD-NKIGLG----TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~----~~~v~hy~I~~~~~-k~i~~n----~~L~~~   67 (128)
                      ++||| .|+|++||++|.  .+.+|+||||+|++ +|.|+|||..    ++.|+||+|.+.+. ++++.+    .++++.
T Consensus        12 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~L   91 (114)
T 1blj_A           12 EKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQAL   91 (114)
T ss_dssp             SSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHH
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCCHHHH
Confidence            58999 899999999994  35899999999987 8999999998    68999999998643 444432    445455


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +.     +++.+.++.+++|..+|..
T Consensus        92 V~-----~y~~~~~~l~~~L~~p~~~  112 (114)
T 1blj_A           92 VQ-----HYSKKGDGLCQKLTLPCVN  112 (114)
T ss_dssp             HH-----HHHHCCSSSSSCCCCCSCC
T ss_pred             HH-----HhhhCCCCCceecCccCCC
Confidence            54     5556678999999999975

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.82  E-value=4.3e-20  Score=125.41  Aligned_cols=91  Identities=13%  Similarity=0.153  Sum_probs=70.1

Q ss_pred             CCCCC-CCCHHHHHHhHh-cCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccccccccC-CCHHHHHHHHHhhc
Q psy9697           1 MAWFH-SVNRERAVQMVA-AGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTF-KPNEVMAAREDATN   77 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n~~-L~~~~r~~~~~l~~   77 (128)
                      ++||| .|+|++||++|. .+.||+||||+|+.+|.|+|||+.++.|+||+|.+.+..+++.+.. ++..  ..+.++++
T Consensus        19 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl--~~LV~~y~   96 (124)
T 2eob_A           19 KPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESL--VELVSYYE   96 (124)
T ss_dssp             STTEESSCCHHHHHHHHHHCCSSSEEEEECCTTSSCEEEEEEETTEEEEEEEEESSSCEESSSSCCBSSH--HHHHHHHT
T ss_pred             CCCeecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCEEEEEEeCCeEEEEEEEECCCEEEECCCCcCCCH--HHHHHHHh
Confidence            58999 899999999994 4479999999998779999999999999999999765555443322 2222  12222666


Q ss_pred             CCCCCCCcccCCcccc
Q psy9697          78 HPRDSHPCRTQPRCVI   93 (128)
Q Consensus        78 l~~~~~~~rl~nrC~~   93 (128)
                      .+....+++|+.+|..
T Consensus        97 ~~~~~~~~~L~~P~~~  112 (124)
T 2eob_A           97 KHALYRKMRLRYPVTP  112 (124)
T ss_dssp             TSCSSSSCCSCEECCH
T ss_pred             hCCCCCCcCCCCcCCc
Confidence            6777888999999874

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.82  E-value=3.2e-20  Score=125.83  Aligned_cols=92  Identities=11%  Similarity=0.175  Sum_probs=70.1

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHH-HHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVM-AARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r-~~~~   73 (128)
                      ++||| .|+|++||++|..+.+|+||||+|++ +|.|+|||+.++.|+||+|...+.++++.+    .++++.+. +...
T Consensus        22 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV~~y~~~  101 (122)
T 2lnw_A           22 YPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCH  101 (122)
T ss_dssp             STTBCCSCCHHHHHHHHHHSCTTBEEEEECCCSSEEEEEEEECSSCEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHS
T ss_pred             CcCCCcCCCHHHHHHHhcCCCCCeEEEEeCCCCCCcEEEEEEeCCcEEEEEEEEcCCEEEECCCCeECCHHHHHHHHhhC
Confidence            58999 89999999999767899999999987 899999999999999999998776655433    34444443 1111


Q ss_pred             HhhcCCCCCCCcccCCcccc
Q psy9697          74 DATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nrC~~   93 (128)
                       --....++.+++|+.||..
T Consensus       102 -~l~~~~~~l~~~L~~P~~~  120 (122)
T 2lnw_A          102 -SLKESFKQLDTTLKYPYKS  120 (122)
T ss_dssp             -CGGGTCTTCCCCCCBCSSS
T ss_pred             -cCcccCCCcCeeeCCcCCC
Confidence             1112367888999988864

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=4.4e-20  Score=124.58  Aligned_cols=93  Identities=16%  Similarity=0.204  Sum_probs=71.3

Q ss_pred             CCCCC-CCCHHHHHHhHh-cCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccccCCCHHHHHHHHHhh
Q psy9697           1 MAWFH-SVNRERAVQMVA-AGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLGTFKPNEVMAAREDAT   76 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n~~L~~~~r~~~~~l~   76 (128)
                      ++||| .|+|++||++|. .+.+|+||||+|++ +|.|+|||+.++.|+||+|.+... .+++.+..++...  .+.+++
T Consensus        16 ~~WyhG~isR~~Ae~lL~~~g~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~--~LI~~y   93 (119)
T 2gsb_A           16 KIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIG--DIIDHY   93 (119)
T ss_dssp             CSSBCCSSCHHHHHHHHHHTCCSSEEEEEECSSSTTCEEEEEECSSCBCCCCEEEETTTEEEESSCCBSCHH--HHHHHH
T ss_pred             CCcccCCCCHHHHHHHHhhcCCCCeEEEEeCCCCCCceEEEEEECCEEEEEEEEEcCCCCEEECCcccCCHH--HHHHHH
Confidence            58999 899999999994 45889999999987 899999999999999999998654 4444443332221  222255


Q ss_pred             cCCCCCCCcccCCcccccC
Q psy9697          77 NHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~tg   95 (128)
                      +......+++|+.+|....
T Consensus        94 ~~~~l~~~~~L~~Pv~~~~  112 (119)
T 2gsb_A           94 RKEQIVEGYYLKEPVPMQD  112 (119)
T ss_dssp             TTSCSBTTBCCCCCCCCCC
T ss_pred             hhCccCCCCEeCCccCCCC
Confidence            5666778899999998644

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.82  E-value=3.3e-20  Score=123.08  Aligned_cols=91  Identities=22%  Similarity=0.270  Sum_probs=67.0

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccc-cc---cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIG-LG---TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~-~n---~~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++| ..+.+|+||||+|++ +|.|+|||+.++.|+||+|...+..+.+ .+   +++++.+. .+.
T Consensus         7 ~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~-~y~   85 (109)
T 3tkz_A            7 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQ-YYM   85 (109)
T ss_dssp             CCSBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHH-HHH
T ss_pred             CCceecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEeCCCEEEecCCcccCCHHHHHH-HHH
Confidence            58999 89999999999 445899999999986 8999999999999999999876554533 33   33344443 111


Q ss_pred             HhhcC---CCCCCCcccCCcccc
Q psy9697          74 DATNH---PRDSHPCRTQPRCVI   93 (128)
Q Consensus        74 ~l~~l---~~~~~~~rl~nrC~~   93 (128)
                       -+..   ..++.+++|+.||..
T Consensus        86 -~~~~~l~~~~gl~~~L~~Pv~~  107 (109)
T 3tkz_A           86 -EHHGQLKEKNGDVIELKYPLNC  107 (109)
T ss_dssp             -HSTTSEEETTSCBCCCCEECC-
T ss_pred             -hCcCccccCCCceEECCCcccC
Confidence             1111   246778889888864

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.81  E-value=6.7e-20  Score=124.90  Aligned_cols=91  Identities=21%  Similarity=0.339  Sum_probs=69.7

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec--ccccc--c--ccCCCHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD--DNKIG--L--GTFKPNEVMA   70 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~--~k~i~--~--n~~L~~~~r~   70 (128)
                      ++||| .|+|++||++|..  +.||+||||+|++ +|.|+|||+.++.|+||+|.+.+  .+++.  .  ...++..  .
T Consensus        26 ~~WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL--~  103 (126)
T 2aug_A           26 QPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDL--I  103 (126)
T ss_dssp             STTEETTCCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSSCBSSH--H
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEcCCeEEEEEEEEECCCCeEEEEeCCCCCccCCH--H
Confidence            58999 8999999999943  3799999999987 89999999999999999999752  33322  2  2222222  2


Q ss_pred             HHHHhhcCCCCCCCcccCCcccc
Q psy9697          71 AREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        71 ~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      .+.++++.+.++.+++|+.+|..
T Consensus       104 eLV~~y~~~~~~l~~~L~~P~~r  126 (126)
T 2aug_A          104 QLVEFYQLNKGVLPCKLKHYCAR  126 (126)
T ss_dssp             HHHHHHTTCCTTSSSCCCEECCC
T ss_pred             HHHHHHhhCCCCCceecCCCcCC
Confidence            22337778889999999999963

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.81  E-value=8.1e-20  Score=126.25  Aligned_cols=91  Identities=16%  Similarity=0.150  Sum_probs=70.1

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccccc-c---cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGL-G---TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~-n---~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|....+|+||||+|++ +|.|+|||+.++.|+||+|+..+.++++. +   .+|++.+.     
T Consensus        26 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~eLV~-----  100 (138)
T 2crh_A           26 HLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVE-----  100 (138)
T ss_dssp             SSSBCCSCCHHHHHHHTTTSCTTEEEEECCSSTTCCCEEEEEETTEEEEEECEEETTEEESSTTCCBSSHHHHHH-----
T ss_pred             CCcccCCCCHHHHHHHhcCCCCCEEEEEECCCCCCCEEEEEEECCeEEEEEEEeCCCEEEECCCCccCCHHHHHH-----
Confidence            58999 89999999999767899999999987 79999999999999999997444445443 2   33333333     


Q ss_pred             hhcCCC-----CCCCcccCCcccccCC
Q psy9697          75 ATNHPR-----DSHPCRTQPRCVITSR   96 (128)
Q Consensus        75 l~~l~~-----~~~~~rl~nrC~~tgr   96 (128)
                      +++.+.     ++.+++|+.+|.....
T Consensus       101 ~y~~~~l~~~~~~l~~~L~~Pv~~~~~  127 (138)
T 2crh_A          101 FYQQNSLKDCFKSLDTTLQFPFKEPEK  127 (138)
T ss_dssp             HHTTSCGGGTCTTCCCCCCEESSCCCC
T ss_pred             HHHhCccccccCCcCcccCCccCCCCC
Confidence            443333     6788999999986443

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.81  E-value=8.7e-20  Score=124.08  Aligned_cols=89  Identities=19%  Similarity=0.278  Sum_probs=70.5

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEe------CCEeeEEeeeeeccc-ccccc----cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWY------GGRAYNIFIRKRDDN-KIGLG----TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~------~~~v~hy~I~~~~~k-~i~~n----~~L~~~   67 (128)
                      ++||| .|+|++||++| ..+.+|+||||+|+.+|.|+|||+.      ++.|+||+|.+.+.+ +++.+    .+|++.
T Consensus        11 ~~WyhG~isR~eAe~lL~~~g~~G~FLVR~Ss~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eL   90 (125)
T 2ge9_A           11 YEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPEL   90 (125)
T ss_dssp             SSSEETTCCHHHHHHHHHHHTCTTEEEEEECSSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSSHHHH
T ss_pred             CCccccCCCHHHHHHHHhhcCCCceEEEEecCCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHH
Confidence            58999 89999999999 4458999999999558999999997      479999999987543 44432    333334


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCccccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVIT   94 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~t   94 (128)
                      +.     +++.+.++.+++|+.+|...
T Consensus        91 V~-----~y~~~~~~l~~~L~~P~~~~  112 (125)
T 2ge9_A           91 IN-----YHQHNSAGLISRLKYPVSQQ  112 (125)
T ss_dssp             HH-----HHHCCCTTCSCCSSEECCSS
T ss_pred             HH-----HhhhCCCCCceeCCCccCCC
Confidence            33     66677788999999999863

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=4.9e-20  Score=125.16  Aligned_cols=93  Identities=17%  Similarity=0.225  Sum_probs=71.7

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEe------CCEeeEEeeeeecc-ccccc-ccCCCHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWY------GGRAYNIFIRKRDD-NKIGL-GTFKPNEVMA   70 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~------~~~v~hy~I~~~~~-k~i~~-n~~L~~~~r~   70 (128)
                      ++||| .|+|++||++| ..+.+|+||||+|+.+|.|+|||..      ++.|+||+|.+... ++++. ...++..  .
T Consensus        16 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl--~   93 (125)
T 2dm0_A           16 YEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSI--P   93 (125)
T ss_dssp             SSSBCCSCCHHHHHHHHHHHCSTTCBCEEEETTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSSH--H
T ss_pred             CCcccCCCCHHHHHHHHhhcCCCCEEEEEecCCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCCH--H
Confidence            58999 89999999999 4558999999999558999999998      46899999998755 34443 2233322  2


Q ss_pred             HHHHhhcCCCCCCCcccCCcccccC
Q psy9697          71 AREDATNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        71 ~~~~l~~l~~~~~~~rl~nrC~~tg   95 (128)
                      .+.++++.+.++.+++|+.+|....
T Consensus        94 eLV~~y~~~~~~l~~~L~~P~~~~~  118 (125)
T 2dm0_A           94 ELIWYHQHNAAGLMTRLRYPVGLMG  118 (125)
T ss_dssp             HHHHHHTTCCCSSSCCCCSBCCSSC
T ss_pred             HHHHHhhhCCCCCccCCCCccCCCC
Confidence            2333677778899999999998754

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.81  E-value=1.8e-19  Score=121.52  Aligned_cols=90  Identities=21%  Similarity=0.240  Sum_probs=68.3

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc--c---cCCCHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL--G---TFKPNEVMAAR   72 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~--n---~~L~~~~r~~~   72 (128)
                      ++||| .|+|++||++|+...+|+||||+|++ +| |+|||+.++.|+||+|.+.+. ++.+.  .   .++++.+.   
T Consensus        16 ~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~~-y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~---   91 (119)
T 2cs0_A           16 PEWFHGAISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVT---   91 (119)
T ss_dssp             CSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHH---
T ss_pred             CCccccCCCHHHHHHHhcCCCCCEEEEEecCCCCC-EEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHH---
Confidence            58999 89999999999878899999999987 67 999999999999999998755 55443  2   33333333   


Q ss_pred             HHhhcCCCCC-CCcccCCcccccCC
Q psy9697          73 EDATNHPRDS-HPCRTQPRCVITSR   96 (128)
Q Consensus        73 ~~l~~l~~~~-~~~rl~nrC~~tgr   96 (128)
                        +++..... ..+.|.++|.....
T Consensus        92 --~y~~~~l~~~~~~L~~P~~~~~p  114 (119)
T 2cs0_A           92 --FHQQKPIEPRRELLTQPCRQKDS  114 (119)
T ss_dssp             --HHTTSCCSSCCCCCCSBCCCSSC
T ss_pred             --HHhhCcCCCCCCEeCccCCCCCC
Confidence              43333332 34789999987543

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.80  E-value=4.3e-20  Score=126.60  Aligned_cols=89  Identities=18%  Similarity=0.247  Sum_probs=71.4

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeC---------------CEeeEEeeeeecccccc----c
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYG---------------GRAYNIFIRKRDDNKIG----L   60 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~---------------~~v~hy~I~~~~~k~i~----~   60 (128)
                      +||| .|+|++||++|+..++|+||||+|++ +|.|+|||+.+               +.|+||+|++.+.++++    .
T Consensus        21 ~Wyhg~isR~eAe~lL~~~~~G~FLVR~S~s~~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g~~l~g~~~  100 (131)
T 2kno_A           21 FWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKGCPS  100 (131)
T ss_dssp             HHBCTTCCHHHHHHHHTTSCTTBEEEEECSSSTTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECCSSCCCEETCSS
T ss_pred             CceecCCCHHHHHHHhcCCCCCeEEEecCCCCCCCEEEEEEeCCCCcccccccccccCCceEEEEEEECCCCCEEecCCC
Confidence            6999 89999999999767899999999987 89999999986               38999999987766655    3


Q ss_pred             ccCCCHHHHHHHHHhhcCCCCCCCcccCCccc
Q psy9697          61 GTFKPNEVMAAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        61 n~~L~~~~r~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      +..++..  ..+.++++.+.+++|++|..||.
T Consensus       101 ~~~F~SL--~eLV~~y~~~~~~L~~~L~~P~~  130 (131)
T 2kno_A          101 EPYFGSL--SALVSQHSISPISLPCCLRIPSK  130 (131)
T ss_dssp             CCCCCSH--HHHHHTTTTCCSSCSSCCBCSSC
T ss_pred             CCccCCH--HHHHHHHhhCCCCCCeECCCcCC
Confidence            3333322  22333788889999999999984

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.80  E-value=6.8e-20  Score=122.15  Aligned_cols=88  Identities=17%  Similarity=0.093  Sum_probs=66.1

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccccCCCHHHHHHHHHhhcC
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLGTFKPNEVMAAREDATNH   78 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n~~L~~~~r~~~~~l~~l   78 (128)
                      +||| .|+|++||++|+.+.+|+||||+|++ +|.|+|||..++.|+||+|..... ++.+.+..++....  +.++++.
T Consensus        20 ~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~--LV~~y~~   97 (111)
T 2eo3_A           20 AWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPA--LLEFYKI   97 (111)
T ss_dssp             HHEEESCCHHHHHHHHSSCCTTCEEEEECSSSSSCEEEEEEETTEEEEEEEEEETTTEEEETTCCBSSHHH--HHHHHTT
T ss_pred             CcccCCCCHHHHHHHhcCCCCceEEEEeecCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECCcccCCHHH--HHHHHhh
Confidence            6999 89999999999877999999999987 899999999999999999998544 45454433333221  2224444


Q ss_pred             CCCCCCcccCCccc
Q psy9697          79 PRDSHPCRTQPRCV   92 (128)
Q Consensus        79 ~~~~~~~rl~nrC~   92 (128)
                      +... .+.|+.||.
T Consensus        98 ~~l~-~~~L~~Pv~  110 (111)
T 2eo3_A           98 HYLD-TTTLIEPAP  110 (111)
T ss_dssp             SCSS-SSCCCCBCC
T ss_pred             CCCC-CccCCCcCc
Confidence            4443 577888875

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.80  E-value=1.6e-19  Score=121.91  Aligned_cols=94  Identities=20%  Similarity=0.206  Sum_probs=70.8

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++|....+|+||||+|++  +|.|+|||..++.|+||+|.+.+.++.+.+    .++++.+. .+.
T Consensus        11 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI~-~y~   89 (120)
T 2iug_A           11 AEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELIN-HYR   89 (120)
T ss_dssp             CTTBCCSCCHHHHHHHHTTCCTTEEEEEECSSGGGCSEEEEEEETTEEEEEEEEEETTEEESSSSCCBSSHHHHHH-HHH
T ss_pred             CCccccCCCHHHHHHHhcCCCCcEEEEECCCCCCCCcEEEEEEECCEEEEEEEEEcCCEEEECCCCccCCHHHHHH-HHH
Confidence            58999 89999999999777899999999986  799999999999999999998766664432    34444443 222


Q ss_pred             HhhcCCC--CCCCcccCCcccccCC
Q psy9697          74 DATNHPR--DSHPCRTQPRCVITSR   96 (128)
Q Consensus        74 ~l~~l~~--~~~~~rl~nrC~~tgr   96 (128)
                       -..++.  ++.+++|..+|.....
T Consensus        90 -~~~~~~~~~~l~~~L~~Pv~r~~~  113 (120)
T 2iug_A           90 -NESLAQYNPKLDVKLLYPVSKYQQ  113 (120)
T ss_dssp             -HSCGGGTCGGGCCCCCEECCTTTC
T ss_pred             -hCccccccCCcceeeCCcCCcCcc
Confidence             222222  3578999999986543

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.80  E-value=1.8e-19  Score=124.82  Aligned_cols=90  Identities=23%  Similarity=0.351  Sum_probs=66.8

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC---CCCEEEEEEeCCEeeEEeeeeecc-c-cccc-----c---cCCC
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS---SEPLTLTLWYGGRAYNIFIRKRDD-N-KIGL-----G---TFKP   65 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~---~~~~~lsv~~~~~v~hy~I~~~~~-k-~i~~-----n---~~L~   65 (128)
                      ++||| .|+|++||++| +.+.||+||||+|+.   +|.|+|||+.++.|+||+|++... + +++.     +   .+++
T Consensus        23 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl~  102 (141)
T 2eo6_A           23 KPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVV  102 (141)
T ss_dssp             CSSEEESCCHHHHHHHHHHHCCTTCBCEEECSTTCSSCSEEEEEEETTEEEEEEECEETTTTEECSSSCCTTCCCBSSHH
T ss_pred             CCeEecCCCHHHHHHHhhccCCCceEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEeCCCCEEEEccccCCCCccCCHH
Confidence            58999 89999999999 557899999999984   699999999999999999997543 4 3333     2   3444


Q ss_pred             HHHHHHHHHhhcCCCC---------CCCcccCCcccccC
Q psy9697          66 NEVMAAREDATNHPRD---------SHPCRTQPRCVITS   95 (128)
Q Consensus        66 ~~~r~~~~~l~~l~~~---------~~~~rl~nrC~~tg   95 (128)
                      +.+.     +++.+.+         ..+++|+.+|....
T Consensus       103 eLV~-----~y~~~~~~l~~~~~~~~~~~~L~~Pv~~~~  136 (141)
T 2eo6_A          103 EIVN-----SHQHNPLVLIDSQNNTKDSTRLKYAVKVSS  136 (141)
T ss_dssp             HHHH-----HHHHSCCCCCCSSSCCCCCCCCCCBCCCCC
T ss_pred             HHHH-----HHhhCCccceecccCCCCceEeCcCcccCC
Confidence            4444     3322223         33788888887643

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.79  E-value=7.4e-20  Score=123.33  Aligned_cols=82  Identities=12%  Similarity=-0.006  Sum_probs=63.2

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEe----CCEeeEEeeeeecccccccc-cCC-----CHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWY----GGRAYNIFIRKRDDNKIGLG-TFK-----PNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~----~~~v~hy~I~~~~~k~i~~n-~~L-----~~~   67 (128)
                      ++||| .|+|++||++| +..++|+||||+|++ +|.|+|||+.    ++.|+||+|.+.+.++++.+ ..+     ++.
T Consensus        21 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~g~~~i~~~~~F~~~sL~eL  100 (118)
T 2el8_A           21 TPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAV  100 (118)
T ss_dssp             SCTTCCCCCHHHHHHHHHHSSTTCSBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCCBTTBCCBSSSSCCCCSSHHHH
T ss_pred             CCceecCCCHHHHHHHHhhCCCCcEEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEEcCCEEEEeCCCeECCCCHHHH
Confidence            58999 89999999999 556899999999987 8999999999    89999999998555555432 233     334


Q ss_pred             HHHHHHHhhcCCCCCCCccc
Q psy9697          68 VMAAREDATNHPRDSHPCRT   87 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl   87 (128)
                      +.     +++.+.++.++++
T Consensus       101 V~-----~y~~~~~gl~~~L  115 (118)
T 2el8_A          101 VN-----YFVSHTKKALVPF  115 (118)
T ss_dssp             HH-----HHHHHSSSCCCBC
T ss_pred             HH-----HHhhCCCCCeEee
Confidence            43     4555566776554

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.79  E-value=8e-20  Score=120.46  Aligned_cols=89  Identities=18%  Similarity=0.222  Sum_probs=66.8

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~r~~~~~l   75 (128)
                      ++||| .|+|++||++|.  .||+||||+|++ +|.|+|||..++.|+||+|+..+..+.+.+   .++++.+. .+. -
T Consensus         7 ~~Wyhg~isR~~Ae~lL~--~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LI~-~y~-~   82 (104)
T 1mil_A            7 EPWFHGKLSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLIS-YHM-D   82 (104)
T ss_dssp             CTTBCSSCCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHH-HHH-H
T ss_pred             CCcCCCCCCHHHHHHHhc--cCCcEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCEEEECCceeCCHHHHHH-HHh-h
Confidence            58999 899999999996  689999999987 899999999999999999985555555544   44444444 222 2


Q ss_pred             hcCC--CCCCCcccCCcccc
Q psy9697          76 TNHP--RDSHPCRTQPRCVI   93 (128)
Q Consensus        76 ~~l~--~~~~~~rl~nrC~~   93 (128)
                      +.+|  .++.++.|+.||..
T Consensus        83 ~~~p~~~~g~~~~L~~Pv~r  102 (104)
T 1mil_A           83 NHLPIISAGSELCLQQPVER  102 (104)
T ss_dssp             HTCCEEETTEEECCCEECCC
T ss_pred             CCCccccCCceEEeCccCCC
Confidence            2232  24667788888865

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.79  E-value=3.2e-19  Score=123.16  Aligned_cols=88  Identities=23%  Similarity=0.321  Sum_probs=67.3

Q ss_pred             CCCCC-CC-CHHHHHHhHhc------CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc----ccccc-c---cC
Q psy9697           1 MAWFH-SV-NRERAVQMVAA------GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD----NKIGL-G---TF   63 (128)
Q Consensus         1 ~~W~~-~i-~r~~ae~ll~~------~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~----k~i~~-n---~~   63 (128)
                      ++||| .| +|++||++|..      +.||+||||+|++ +|.|+|||+.++.|+||+|++...    ++++. +   .+
T Consensus        22 ~~WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~F~s  101 (138)
T 2dx0_A           22 EKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNS  101 (138)
T ss_dssp             CTTBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSCBSS
T ss_pred             CCcccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCcCCC
Confidence            58999 89 89999999942      6899999999987 899999999999999999998753    34443 3   33


Q ss_pred             CCHHHHHHHHHhhcCC---CCCCCcccCCcccc
Q psy9697          64 KPNEVMAAREDATNHP---RDSHPCRTQPRCVI   93 (128)
Q Consensus        64 L~~~~r~~~~~l~~l~---~~~~~~rl~nrC~~   93 (128)
                      +++.+.     +++.+   .++.+++|+.+|..
T Consensus       102 l~eLI~-----~y~~~~l~~~gl~~~L~~Pv~~  129 (138)
T 2dx0_A          102 IYALIQ-----HYREAHLRCAEFELRLTDPVPN  129 (138)
T ss_dssp             HHHHHH-----HTTTSCCCCGGGSSCCCCBCC-
T ss_pred             HHHHHH-----HHhhCCCCCCCcccccCccCCC
Confidence            333333     44333   35678999999976

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.78  E-value=7.1e-19  Score=118.29  Aligned_cols=89  Identities=19%  Similarity=0.258  Sum_probs=66.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~r~~~~~l   75 (128)
                      ++||| .|+|++||++|.  ++|+||||+|++ +|.|+|||+.++.|+||+|...+.++.+.+   +++++.+. .+. -
T Consensus        17 ~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~y~~~~~~F~sl~eLV~-~y~-~   92 (116)
T 2kk6_A           17 QDWYHGAIPRIEAQELLK--KQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLID-HHY-T   92 (116)
T ss_dssp             CTTEEESCCHHHHHHTCC--STTCEEEEECTTCTTCEEEEEEETTEEEEEEEEEETTEEESSSCEESCHHHHHH-HHH-H
T ss_pred             CCCccCCCCHHHHHHHhc--cCCcEEEEECCCCCCcEEEEEEECCeEEEEEEEecCCEEEECCCEeCCHHHHHH-HHh-h
Confidence            58999 899999999996  589999999987 899999999999999999997665665544   34444443 121 1


Q ss_pred             hcCC-CCCCCcccCCcccc
Q psy9697          76 TNHP-RDSHPCRTQPRCVI   93 (128)
Q Consensus        76 ~~l~-~~~~~~rl~nrC~~   93 (128)
                      ..+| ..+..+.|++||..
T Consensus        93 ~~~~i~~~~~~~L~~Pv~r  111 (116)
T 2kk6_A           93 TKQVITKKSGVVLLNPIPK  111 (116)
T ss_dssp             TTCCSCTTTTCCCCSCCCC
T ss_pred             CCCCccCCCCCeECcccCC
Confidence            2222 12456778888865

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.78  E-value=2.1e-19  Score=119.36  Aligned_cols=53  Identities=26%  Similarity=0.494  Sum_probs=49.8

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD   54 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~   54 (128)
                      +||| .|+|++||++|+.+.+|+||||+|++ +|.|+|||..++.|+||+|.+.+
T Consensus         1 ~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~   55 (109)
T 1ju5_A            1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSG   55 (109)
T ss_dssp             CCEETTCCHHHHHHHHTTCCTTEEEEEECSSSTTEEEEEEECSSCEEEEEEECCS
T ss_pred             CccccCCCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCeEEEEEEEECC
Confidence            6999 89999999999777899999999987 89999999999999999999876

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.78  E-value=9.1e-19  Score=124.57  Aligned_cols=108  Identities=16%  Similarity=0.103  Sum_probs=78.0

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc-----------cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG-----------TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n-----------~~L~~~   67 (128)
                      ++||| .|+|++||++|+.++||+||||+|++ +|.|+|||..++.|+||+|...+.++.+.+           .++++.
T Consensus        17 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eL   96 (169)
T 2c9w_A           17 TGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHL   96 (169)
T ss_dssp             TSCBCTTCCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHH
T ss_pred             CCccccCCCHHHHHHHcCCCCCcEEEEecCCCCCCeEEEEEEECCeeEEEEEEEeCCEEEEccccCccccCCCCCCHHHH
Confidence            58999 89999999999778899999999987 899999999999999999998766665443           233444


Q ss_pred             HHHHHHHhhcCC---------CCCCCcccCCcccccCCCCccccccCCCHHHHHHhh
Q psy9697          68 VMAAREDATNHP---------RDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLA  115 (128)
Q Consensus        68 ~r~~~~~l~~l~---------~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~  115 (128)
                      +. .+. -+.++         ..+.++.|.+||..     .....-.|||..++...
T Consensus        97 I~-~y~-~~~~~~~~~~~~~~~~~~~~~L~~P~~~-----~~~sLqhlcR~~i~~~~  146 (169)
T 2c9w_A           97 ID-YYV-QMCKDKRTGPEAPRNGTVHLYLTKPLYT-----SAPSLQHLCRLTINKCT  146 (169)
T ss_dssp             HH-HHH-HHTC--------------CCCCCCBCCS-----SCCCHHHHHHHHHHHHC
T ss_pred             HH-HHH-hCcCCCcccccCCCCcCccceecCcccc-----ccccHHHHHHHHHHHhh
Confidence            43 111 12222         24567889999865     22234568999988765

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.77  E-value=8.4e-19  Score=124.87  Aligned_cols=87  Identities=23%  Similarity=0.279  Sum_probs=70.0

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeecc-cccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDD-NKIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~-k~i~~n----~~L~~   66 (128)
                      ++||| .|+|++||++|..  +.+|+||||+|++ +|.|+|||+.     ++.|+||+|.+... ++++.+    .+|++
T Consensus        74 ~~w~~g~isr~~ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~  153 (175)
T 4d8k_A           74 EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHE  153 (175)
T ss_dssp             CTTBCSSCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHH
T ss_pred             cceecCcccHHHHHHHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHH
Confidence            57999 8999999999943  5799999999986 8999999998     78999999987654 444433    34444


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      .+.     +++.+.++++++|+.+|.
T Consensus       154 LV~-----~y~~~~~gl~~~L~~Pc~  174 (175)
T 4d8k_A          154 LVR-----HYTNASDGLCTRLSRPCQ  174 (175)
T ss_dssp             HHH-----HHHHCCTTSSSCCCSBCC
T ss_pred             HHH-----HHhhCCCCCcccCCCcCC
Confidence            443     566678999999999996

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.77  E-value=1.6e-18  Score=112.70  Aligned_cols=61  Identities=25%  Similarity=0.474  Sum_probs=52.5

Q ss_pred             CCCCC-CCCHHHHHHhHhcC-CcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAG-GEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG   61 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~-~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n   61 (128)
                      ++||| .|+|++||++|... .+|+||||+|++ +|.|+|||..++.|+||+|.+... ++++.+
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~   67 (96)
T 1jyr_A            3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV   67 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS
T ss_pred             cceeccCCCHHHHHHHHhcCCCCcEEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECC
Confidence            68999 89999999999554 499999999987 899999999999999999998644 455544

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.77  E-value=1.7e-18  Score=119.81  Aligned_cols=69  Identities=23%  Similarity=0.257  Sum_probs=58.2

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccccc----c---cCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGL----G---TFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~----n---~~L~~~~r   69 (128)
                      ++||| .|+|++||++|....+|+||||+|++ +|.|+||+..++.|+||+|...+.++.+.    +   .++++.+.
T Consensus        24 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI~  101 (141)
T 2vif_A           24 QGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIE  101 (141)
T ss_dssp             HTCBCCSCCHHHHHHHTTTSCTTCEEEEECSSTTCSEEEEEEETTEEEEEEEEEETTEEEETTCCSCCCBSSHHHHHH
T ss_pred             CCCcccCCCHHHHHHHhcCCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEEECCEEEEeecCCCCccCCHHHHHH
Confidence            47999 89999999999767899999999987 89999999999999999999876666554    3   44555555

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.77  E-value=6e-19  Score=115.86  Aligned_cols=69  Identities=23%  Similarity=0.277  Sum_probs=57.1

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~r   69 (128)
                      ++||| .|+|++||++| +...||+||||+|++ +|.|+|||+.++.|+||+|...+.++.+.+   .++++.+.
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~F~sl~~LV~   79 (102)
T 2cia_A            5 SEWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVE   79 (102)
T ss_dssp             CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEECCSSSCEEEEEEEETTEEEETTEEESSHHHHHH
T ss_pred             CccccCCCCHHHHHHHHhhCCCCcEEEEEECCCCCCCEEEEEEeCCeeEEEEEEecCCEEEECCcCcCCHHHHHH
Confidence            58999 89999999999 667999999999987 899999999999999999996555665544   34444443

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.76  E-value=2.4e-18  Score=112.63  Aligned_cols=61  Identities=18%  Similarity=0.365  Sum_probs=53.2

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG   61 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n   61 (128)
                      ++||| .|+|++||++|...++|+||||+|++ +|.|+|||+.++.|+||+|.+... ++++.+
T Consensus         9 ~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~   72 (100)
T 1r1p_A            9 PEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT   72 (100)
T ss_dssp             TTTSCTTCCHHHHHHHHHTSCTTBEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSS
T ss_pred             CCccccCCCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeC
Confidence            58999 89999999999666899999999987 899999999999999999998643 454444

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.76  E-value=3e-18  Score=115.24  Aligned_cols=61  Identities=21%  Similarity=0.425  Sum_probs=52.5

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG   61 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n   61 (128)
                      ++||| .|+|++||++| ..+.||+||||+|++ +|.|+|||+.++.|+||+|.+... ++++.+
T Consensus         6 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~   70 (117)
T 3ov1_A            6 HPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV   70 (117)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS
T ss_pred             CCcccCCCCHHHHHHHHhCCCCCCcEEEEeCCCCCCCEEEEEecCCceEEEEEEECCCCeEEECC
Confidence            58999 89999999999 445799999999987 899999999999999999987544 555544

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.75  E-value=5e-18  Score=127.49  Aligned_cols=94  Identities=17%  Similarity=0.222  Sum_probs=73.3

Q ss_pred             CCCCC-CCCHHHHHHhH-hc-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc-ccCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AA-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-GTFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n~~L~~~~r~~~~~   74 (128)
                      ++||| +|+|++||++| .. +.+|+||||+|++ +|.|+|||+.++.|+||+|.+... ++.+. +..++..  ..+.+
T Consensus         5 ~~Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl--~eLv~   82 (254)
T 1a81_A            5 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASP--ADLCH   82 (254)
T ss_dssp             STTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSH--HHHHH
T ss_pred             CccccCCCCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCH--HHHHH
Confidence            58999 89999999999 33 4899999999988 899999999999999999998543 44443 3333222  12223


Q ss_pred             hhcCCCCCCCcccCCcccccCC
Q psy9697          75 ATNHPRDSHPCRTQPRCVITSR   96 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~tgr   96 (128)
                      +++.+.++.++.|+.+|.....
T Consensus        83 ~y~~~~~~l~~~L~~p~~~~~~  104 (254)
T 1a81_A           83 YHSQESDGLVCLLKKPFNRPQG  104 (254)
T ss_dssp             HHTTCCTTSSSCCCEECCCCSS
T ss_pred             HHHhCCCCceECCccccCCCCC
Confidence            6777889999999999987543

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.75  E-value=4.8e-18  Score=113.73  Aligned_cols=90  Identities=19%  Similarity=0.269  Sum_probs=66.5

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccccccccC---CCHHHHHHHHHhh
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTF---KPNEVMAAREDAT   76 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n~~---L~~~~r~~~~~l~   76 (128)
                      ++||| .|+|++||++|.  ++|+||||+|++...|+|||+.++.|+||+|+..+..+.+.+..   +++.+. .+. -+
T Consensus        16 ~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~~~y~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LV~-~y~-~~   91 (114)
T 1wqu_A           16 QLWYHGAIPRAEVAELLV--HSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLID-HLL-ST   91 (114)
T ss_dssp             CTTEEESCCHHHHHTTCC--STTEEEEEECSSSCCEEEEEEETTEEEEEECEECSSSEESSSCCBSSHHHHHH-HHH-HH
T ss_pred             CCcEeeCCCHHHHHHHhc--cCCeEEEEEcCCCCCEEEEEEECCEEEEEEEEecCCEEEECCCCCCCHHHHHH-HHH-HC
Confidence            58999 899999999995  48999999998733999999999999999999876666665533   344443 222 12


Q ss_pred             cCCC-CCCCcccCCccccc
Q psy9697          77 NHPR-DSHPCRTQPRCVIT   94 (128)
Q Consensus        77 ~l~~-~~~~~rl~nrC~~t   94 (128)
                      +.|- ....+.|.++|...
T Consensus        92 ~~~~~~~~~~~L~~Pv~r~  110 (114)
T 1wqu_A           92 QQPLTKKSGVVLHRAVPSG  110 (114)
T ss_dssp             CCCSCTTTCCCCCEECCSC
T ss_pred             CCCcCCCCCcEECcccCCC
Confidence            2221 24568888888763

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.75  E-value=2.1e-18  Score=124.66  Aligned_cols=106  Identities=13%  Similarity=0.091  Sum_probs=80.4

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc--------cCCCHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG--------TFKPNEVMA   70 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n--------~~L~~~~r~   70 (128)
                      ++||| +|+|++||++|....||+||||+|+. ++.|+||+..++.|+||+|...+.++.+..        +++++.+. 
T Consensus        34 ~~WYhG~isR~eAE~lL~~~~dGtFLVR~S~~~~~~lsLSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV~-  112 (187)
T 2izv_A           34 NPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLE-  112 (187)
T ss_dssp             CTTEEEECCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHH-
T ss_pred             CCccccCCCHHHHHHHhcCCCCCcEEEEECCCCCceEEEEEeeCCeEEEEEEEECCCEEEEeccCCCccccCCHHHHHH-
Confidence            58999 89999999999777899999999987 678999999999999999998866654432        23333333 


Q ss_pred             HHHHhhcCCCCCC--CcccCCcccccCCCCccccccCCCHHHHHHhh
Q psy9697          71 AREDATNHPRDSH--PCRTQPRCVITSRPRGVVLRWRLSRIMFRHLA  115 (128)
Q Consensus        71 ~~~~l~~l~~~~~--~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~  115 (128)
                          +++.+..+.  +++|+.+|.... |.+   --.|||..+++..
T Consensus       113 ----hY~~~~~~~~~~~~L~~Pv~r~~-p~s---LqhLcR~~i~~~~  151 (187)
T 2izv_A          113 ----HYKDPSACMFFEPLLSTPLIRTF-PFS---LQHICRTVICNCT  151 (187)
T ss_dssp             ----HTCCGGGCCTTSCCCCEECCCCS-CCC---HHHHHHHHHHHHS
T ss_pred             ----HHHhccccccccccccccccccc-ccc---HHHHHHHHHHhhc
Confidence                555555544  478999998853 433   3568998887765

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.75  E-value=8e-19  Score=116.94  Aligned_cols=69  Identities=26%  Similarity=0.375  Sum_probs=55.5

Q ss_pred             CCCCC-CCCHHHHHHhHhcC---CcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc---cCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAG---GEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG---TFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~---~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n---~~L~~~~r   69 (128)
                      ++||| .|+|++||++|...   ++|+||||+|++ +|.|+|||+.++.|+||+|.+... .+++.+   .++++.+.
T Consensus         9 ~~WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~   86 (111)
T 2hdv_A            9 YPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLE   86 (111)
T ss_dssp             STTEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEETTEEEEEEEEECTTCCEEETTEEESSHHHHHH
T ss_pred             CCCcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEeCCceeCCHHHHHH
Confidence            58999 89999999999543   899999999987 899999999999999999997644 444433   44444443

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.75  E-value=5e-18  Score=127.49  Aligned_cols=90  Identities=20%  Similarity=0.226  Sum_probs=71.7

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec-cccccc-c---cCCCHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD-DNKIGL-G---TFKPNEVMAA   71 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~-~k~i~~-n---~~L~~~~r~~   71 (128)
                      ++||| .|+|++||++|.  .+.+|+||||+|++ +|.|+|||+.++.|+||+|.+.. .++++. +   .++++.+.  
T Consensus         6 ~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~--   83 (254)
T 2oq1_A            6 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE--   83 (254)
T ss_dssp             CTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH--
T ss_pred             CCccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHH--
Confidence            58999 899999999993  45899999999987 79999999999999999999854 345443 3   33333333  


Q ss_pred             HHHhhcCCCCCCCcccCCcccccC
Q psy9697          72 REDATNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        72 ~~~l~~l~~~~~~~rl~nrC~~tg   95 (128)
                         ++..+.++.++.|..+|....
T Consensus        84 ---~y~~~~~~l~~~L~~p~~~~~  104 (254)
T 2oq1_A           84 ---FYSRDPDGLPCNLRKPCNRPS  104 (254)
T ss_dssp             ---HHHHCCTTSSSCCCSBCCCCT
T ss_pred             ---HHHhCCCCcccccccccCCCC
Confidence               555667899999999998644

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.74  E-value=4.6e-18  Score=127.70  Aligned_cols=88  Identities=25%  Similarity=0.365  Sum_probs=69.6

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecc-ccccc-c---cCCCHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-G---TFKPNEVMAAR   72 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n---~~L~~~~r~~~   72 (128)
                      ++||| .|+|++||++|..  +.+|+||||+|+.+|.|+|||..++.|+||+|.+... .+++. .   .++++.+.   
T Consensus       159 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~---  235 (254)
T 2oq1_A          159 MPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE---  235 (254)
T ss_dssp             STTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHH---
T ss_pred             CcccccCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEEEECCeEEEEEEEEcCCCCEEECCCceECCHHHHHH---
Confidence            58999 8999999999953  4899999999944899999999999999999997654 44433 2   33333443   


Q ss_pred             HHhhcCCCCCCCcccCCcccc
Q psy9697          73 EDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        73 ~~l~~l~~~~~~~rl~nrC~~   93 (128)
                        +++.+.++.+++|+.+|..
T Consensus       236 --~y~~~~~~l~~~L~~p~~r  254 (254)
T 2oq1_A          236 --YLKLKADGLIYCLKEACPN  254 (254)
T ss_dssp             --HHHHCCTTSSSCCCSBCCC
T ss_pred             --HHHhCCCCCCeeCCccCcC
Confidence              5556678999999999963

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.74  E-value=1e-17  Score=125.54  Aligned_cols=115  Identities=21%  Similarity=0.330  Sum_probs=77.8

Q ss_pred             CCCCC-CC-----CHHHHHHhHh------cCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc----ccc-cc-
Q psy9697           1 MAWFH-SV-----NRERAVQMVA------AGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN----KIG-LG-   61 (128)
Q Consensus         1 ~~W~~-~i-----~r~~ae~ll~------~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k----~i~-~n-   61 (128)
                      ++||| +|     +|++||++|+      .+.||+||||+|++ +|.|+|||++++.|+||+|...+..    +++ .+ 
T Consensus         4 e~WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~   83 (246)
T 4fbn_A            4 EKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNL   83 (246)
T ss_dssp             CTTBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEETTE
T ss_pred             CCCcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecCCc
Confidence            58999 79     7999999994      35899999999987 8999999999999999999877642    333 22 


Q ss_pred             --cCCCHHHHHHHHHhhcCCCCCCCcccCCcccccCCCCcccccc---CCCHHHHHHhh-ccCC
Q psy9697          62 --TFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRW---RLSRIMFRHLA-DYNK  119 (128)
Q Consensus        62 --~~L~~~~r~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~---~l~R~~fr~~~-~~G~  119 (128)
                        .+|++.+.+ +. -..+..+....++..+|..+..+..  ..|   .++|.+--+++ ..|+
T Consensus        84 ~F~sl~~LV~~-y~-~~~l~~~~~~~~l~~p~p~~~~~~~--~~Wyhg~isr~~Ae~lL~~~~~  143 (246)
T 4fbn_A           84 VFDSLYDLITH-YQ-QVPLRCNEFEMRLSEPVPQTNAHES--KEWYHASLTRAQAEHMLMRVPR  143 (246)
T ss_dssp             EESSHHHHHHH-HH-HSCEECSSCEECCCCBCCCSCGGGG--STTEESSCCHHHHHHHHHTSCC
T ss_pred             ccCCHHHHHHh-Hh-hcccccccccccccccccccCCccc--CCeeecCccHHHHHHHHhhCCC
Confidence              456666651 11 1223344455566666665432221  233   39999774443 4443

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.74  E-value=7e-18  Score=126.67  Aligned_cols=91  Identities=22%  Similarity=0.256  Sum_probs=70.6

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecc-ccccc-ccCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-GTFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n~~L~~~~r~~~~~l   75 (128)
                      ++||| .|+|++||++|..  +.||+||||+|+.+|.|+|||+.++.|+||+|.+... ++++. ...++..  ..+.++
T Consensus       158 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl--~~LV~~  235 (254)
T 1a81_A          158 MPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTL--WQLVEH  235 (254)
T ss_dssp             STTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCH--HHHHHH
T ss_pred             CCccccCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCH--HHHHHH
Confidence            58999 8999999999943  4899999999944899999999999999999998644 44442 3222222  222337


Q ss_pred             hcCCCCCCCcccCCcccc
Q psy9697          76 TNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        76 ~~l~~~~~~~rl~nrC~~   93 (128)
                      ++.+.++.++.|+.+|..
T Consensus       236 y~~~~~~l~~~L~~p~~r  253 (254)
T 1a81_A          236 YSYKADGLLRVLTVPCQK  253 (254)
T ss_dssp             HTTCCTTSSSCCCCBCCC
T ss_pred             HHHCCCCCCeecCCcCCC
Confidence            777889999999999975

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.73  E-value=9.5e-18  Score=139.39  Aligned_cols=89  Identities=22%  Similarity=0.249  Sum_probs=72.9

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecc-cccccc----cCCCHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG----TFKPNEVMAAR   72 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n----~~L~~~~r~~~   72 (128)
                      ++||| +|+|++||++|..  +.||+||||+|+.+|.|+|||++++.|+||+|.+... .+++.+    .++++.+.   
T Consensus       166 ~~Wy~g~isr~~ae~~L~~~~~~~G~FLvR~s~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv~---  242 (635)
T 4fl3_A          166 MPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVE---  242 (635)
T ss_dssp             STTBCCSCCHHHHHHHHHSSSCCTTCEEEEESSSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHHH---
T ss_pred             CCceeccCCHHHHHHHHHcCCCCCceEEEEecCCCCCEEEEEEECCEEEEEEEEECCCCCEEeCCCCccCCHHHHHH---
Confidence            58999 8999999999943  4799999999966899999999999999999987654 444433    34444444   


Q ss_pred             HHhhcCCCCCCCcccCCccccc
Q psy9697          73 EDATNHPRDSHPCRTQPRCVIT   94 (128)
Q Consensus        73 ~~l~~l~~~~~~~rl~nrC~~t   94 (128)
                        +++.+.++++++|+.+|...
T Consensus       243 --~y~~~~~~l~~~L~~p~~~~  262 (635)
T 4fl3_A          243 --HYSYKADGLLRVLTVPCQKI  262 (635)
T ss_dssp             --HHTTCCTTSSSCCCSBCCC-
T ss_pred             --HhhhCCCCCccccCccCcCc
Confidence              88899999999999999864

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.73  E-value=1.2e-17  Score=117.16  Aligned_cols=60  Identities=22%  Similarity=0.237  Sum_probs=53.4

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGL   60 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~   60 (128)
                      ++||| .|+|++||++|....+|+||||+|++ +|.|+|||+.++.|+||+|...+.++.+.
T Consensus        34 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~rI~~~~g~f~l~   95 (152)
T 2hmh_A           34 SGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQ   95 (152)
T ss_dssp             TSSEETTCCHHHHHHHHHTSCTTEEEEEECCSTTCSEEEEEEETTEEEEEEEECGGGCBEEC
T ss_pred             CCCcCCCCCHHHHHHHhcCCCCCcEEEEeCCCCCCcEEEEEEcCCceEEEEEEecCCEEEEe
Confidence            58999 89999999999778899999999987 89999999999999999999855555543

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.73  E-value=1.9e-17  Score=117.42  Aligned_cols=60  Identities=22%  Similarity=0.225  Sum_probs=53.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGL   60 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~   60 (128)
                      ++||| .|+|++||++|+.+.||+||||+|++ +|.|+|||+.++.|+||+|...+.++++.
T Consensus        23 ~~WyhG~IsR~eAe~lL~~~~~GtFLVR~S~s~~g~y~LSvr~~~~v~H~rI~~~~g~f~l~   84 (164)
T 2bbu_A           23 SGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQ   84 (164)
T ss_dssp             TSCCCTTSCHHHHHHHHHHSSTTCCEEEECSTTSCCEEEEECCTTCCEEEECEEETTEEESS
T ss_pred             CCccCCCCCHHHHHHHhcCCCCCCEEEEECCCCCCCEEEEEEECCceEEEEEEeCCCeEEEe
Confidence            58999 89999999999778999999999987 89999999999999999999865566544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.72  E-value=1.4e-17  Score=137.68  Aligned_cols=91  Identities=21%  Similarity=0.240  Sum_probs=72.6

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccc-cccCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIG-LGTFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~-~n~~L~~~~r~~~~~   74 (128)
                      +|||| +|+|++||++|  ..+.||+||||+|++ +|.|+||+++++.|+||+|++.+. ++++ .+..++..  ..+.+
T Consensus         8 ~~W~~g~i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~~~~~~h~~i~~~~~g~~~~~~~~~f~sl--~~Lv~   85 (613)
T 2ozo_A            8 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGP--AELCE   85 (613)
T ss_dssp             CTTBCBSCCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSH--HHHHH
T ss_pred             CCCcCccCCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcEEECCCCCcCCH--HHHHH
Confidence            58999 89999999999  445799999999988 899999999999999999998754 4443 23222222  22333


Q ss_pred             hhcCCCCCCCcccCCcccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~   93 (128)
                      +++...++++++|..+|..
T Consensus        86 ~y~~~~~~l~~~L~~p~~~  104 (613)
T 2ozo_A           86 FYSRDPDGLPCNLRKPCNR  104 (613)
T ss_dssp             HHTSCCTTSSSCCCSBCCC
T ss_pred             HHhhCCCCCCccCCccCCC
Confidence            7778889999999999986

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.72  E-value=9.3e-18  Score=125.76  Aligned_cols=88  Identities=14%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~r~~~~~l   75 (128)
                      ++||| .|+|++||++| ....||+||||+|+.+|.|+||+..+++|+||+|...+..+++.+   .+|++.+.     +
T Consensus       122 ~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~s~~~g~y~Lsv~~~~~v~H~~I~~~~~~~~~~~~~F~sL~~Lv~-----~  196 (246)
T 4fbn_A          122 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLIS-----Y  196 (246)
T ss_dssp             STTEESSCCHHHHHHHHHTSCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEEETTEEEETTEEESCHHHHHH-----H
T ss_pred             CCeeecCccHHHHHHHHhhCCCCCeEEEEecCCCCCEEEEEEeCCCeEEEEEEeCCCEEEeCCCccCCHHHHHH-----H
Confidence            58999 89999999999 455799999999977899999999999999999997665555544   44444443     5


Q ss_pred             hcCCCCCCCcccCCcccc
Q psy9697          76 TNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        76 ~~l~~~~~~~rl~nrC~~   93 (128)
                      ++......++.|+.||..
T Consensus       197 y~~~p~~~~~~L~~Pv~~  214 (246)
T 4fbn_A          197 YEKHPLYRKMKLRYPINE  214 (246)
T ss_dssp             HHHSCSBTTBCCCEECSH
T ss_pred             hCcCCCCCCcCCCCcCCC
Confidence            556677888999999863

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.71  E-value=1.7e-17  Score=127.66  Aligned_cols=90  Identities=18%  Similarity=0.226  Sum_probs=70.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeeccccc-ccc----cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKI-GLG----TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i-~~n----~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|....+|+||||+|+.+|.|+|||+.++.|+||+|.+.+.+++ ...    .+|++.+.     
T Consensus       194 ~~WyhG~IsR~eAE~lL~~~~~GtFLVR~Ss~~g~y~LSv~~~~~V~H~rI~~~~~g~~~~~~~~~F~SL~eLV~-----  268 (302)
T 2y3a_B          194 RTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVL-----  268 (302)
T ss_dssp             TTTBCCSCCHHHHHHHHTTSCTTBEEBCCCSSTTCEEEEEECSSSEEEEEEEEETTEEESBTTBCCCSSHHHHHH-----
T ss_pred             CCccCCCCCHHHHHHHhcCCCCCcEEEEeccCCCceEEEEEeCCeeEEEEEEECCCceEEeCCCCCCCCHHHHHH-----
Confidence            58999 89999999999777999999999944899999999999999999998876543 322    33333333     


Q ss_pred             hhcC-----CCCCCCcccCCcccccC
Q psy9697          75 ATNH-----PRDSHPCRTQPRCVITS   95 (128)
Q Consensus        75 l~~l-----~~~~~~~rl~nrC~~tg   95 (128)
                      ++..     ..++.+++|..||....
T Consensus       269 ~Y~~~~L~~~~~gl~~~L~~Pv~~~~  294 (302)
T 2y3a_B          269 HYQHASLVQHNDALTVTLAHPVRAPG  294 (302)
T ss_dssp             TTSSSCSTTTCSSCCCCCSBCSCCCC
T ss_pred             HHHhCCccccCCCCceeeCCccCCCC
Confidence            4432     24678999999998754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.71  E-value=1.4e-17  Score=134.36  Aligned_cols=126  Identities=22%  Similarity=0.357  Sum_probs=95.7

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-ccccc-ccCCCHHHHHHHHHhh
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-GTFKPNEVMAAREDAT   76 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n~~L~~~~r~~~~~l~   76 (128)
                      ++||| .|+|++||++|+.+.+|+||||+|+. +|.|+|||..++.|+||+|++... ++++. ...++...  .+...+
T Consensus       105 ~~wyhg~i~r~~ae~ll~~~~~G~fLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~--eLv~~~  182 (495)
T 1opk_A          105 HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLA--ELVHHH  182 (495)
T ss_dssp             STTEEEECCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHH--HHHHHH
T ss_pred             hhhhccCCCHHHHHHHhhCCCCceEEEEeCCCCCCceEEEEeeCCeEEEEEEEecCCCceEeccCccchhHH--HHhhhh
Confidence            58999 79999999999778899999999987 899999999999999999998654 34332 22222221  122255


Q ss_pred             cCCCCCCCcccCCcccccCCCC--c---cccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          77 NHPRDSHPCRTQPRCVITSRPR--G---VVLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~tgr~~--g---~~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      ....++..+.+..+|.....|.  +   .+..|++.+..|  .+.++.|.++-|.++.|
T Consensus       183 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~  241 (495)
T 1opk_A          183 STVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW  241 (495)
T ss_dssp             TTCCTTSSSCCCEECCCCSCCCCSSSCSSSSCCBCCGGGEEEEEESGGGTTSSEEEEEE
T ss_pred             cccccccchhccccccccccccccccCccccccccCHHHceeeeEecCCCCeEEEEEEE
Confidence            6777888888888887655543  1   236788888755  78899999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.71  E-value=3.2e-17  Score=136.19  Aligned_cols=92  Identities=17%  Similarity=0.217  Sum_probs=73.1

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccc-cccCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIG-LGTFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~-~n~~L~~~~r~~~~~   74 (128)
                      ++||| +|+|++||++|..  ++||+||||+|++ +|.|+|||++++.|+||+|.+.+. ++++ .+..++..  ..+.+
T Consensus        13 ~~Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~f~sl--~~Lv~   90 (635)
T 4fl3_A           13 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASP--ADLCH   90 (635)
T ss_dssp             CTTBCBSCCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSH--HHHHH
T ss_pred             CCccCCCCCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEeCCEEEeEEEEEcCCCCEEeCCCCccCCH--HHHHH
Confidence            47999 8999999999943  5799999999987 899999999999999999998754 4444 23222222  22333


Q ss_pred             hhcCCCCCCCcccCCccccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVIT   94 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~t   94 (128)
                      +++.+.++++++|+.+|...
T Consensus        91 ~y~~~~~~l~~~L~~p~~~~  110 (635)
T 4fl3_A           91 YHSQESDGLVCLLKKPFNRP  110 (635)
T ss_dssp             HHTTCCTTSSSCCCEECCCC
T ss_pred             HHhhCCCCCeeccCCcCCCc
Confidence            77888999999999999864

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.71  E-value=8.3e-18  Score=124.63  Aligned_cols=89  Identities=17%  Similarity=0.165  Sum_probs=68.5

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc------------------ccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD------------------NKIGL   60 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~------------------k~i~~   60 (128)
                      ++||| .|+|++||++|+.+.||+||||+|++ +|.|+|||+.++.|+||+|.+.+.                  .+.+.
T Consensus        13 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (230)
T 2dvj_A           13 SSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG   92 (230)
T ss_dssp             SSSCCSSCCTTHHHHHHTTSSSSCBEEECCSSCTTSCEEECCCSSSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCEESS
T ss_pred             CCcccCCCCHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCCcccccccccccccccceEEEeC
Confidence            47999 89999999999777899999999987 899999999999999999997763                  23333


Q ss_pred             c---cCCCHHHHHHHHHhhcCCCCCCCcccCCcccccC
Q psy9697          61 G---TFKPNEVMAAREDATNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        61 n---~~L~~~~r~~~~~l~~l~~~~~~~rl~nrC~~tg   95 (128)
                      +   .+|++.+.     +++.+... .+.|+.+|....
T Consensus        93 ~~~F~sl~~LV~-----~y~~~~l~-~~~L~~Pv~~~~  124 (230)
T 2dvj_A           93 DQEFDSLPALLE-----FYKIHYLD-TTTLIEPVSRSR  124 (230)
T ss_dssp             SCEESSHHHHHT-----TSTTTCSS-SSCCCCBCCSCC
T ss_pred             CceeCCHHHHHH-----HHhhCccc-cccccccccccc
Confidence            3   34444444     55555444 477888887543

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.70  E-value=2.4e-17  Score=130.00  Aligned_cols=93  Identities=20%  Similarity=0.198  Sum_probs=72.7

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++|..+.+|+||||+|++  +|.|+|||+.++.|+||+|...+.++.+.+    +++++.+. ++.
T Consensus        10 ~~WYhG~IsR~eAE~lL~~~~dG~FLVR~S~s~~~g~y~LSvr~~~~v~H~rI~~~~g~y~l~~~~~F~SL~eLV~-~Y~   88 (373)
T 3hhm_B           10 AEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELIN-HYR   88 (373)
T ss_dssp             CTTEEESCCHHHHHHHTTTCCTTEEEEEECSCC--CCEEEEEEETTEEEEEEECCSSSCBCSSSSCCBSSSHHHHH-HHH
T ss_pred             CCccCCCCCHHHHHHHhcCCCCCCEEEeccCCCCCCCEEEEEEECCeeEEEEEEecCCeEEeCCCCCcCCHHHHHH-HHh
Confidence            58999 89999999999777999999999986  799999999999999999998776665543    55666665 111


Q ss_pred             HhhcCC--CCCCCcccCCcccccC
Q psy9697          74 DATNHP--RDSHPCRTQPRCVITS   95 (128)
Q Consensus        74 ~l~~l~--~~~~~~rl~nrC~~tg   95 (128)
                       -+.++  .++++++|..||..-.
T Consensus        89 -~~~l~~~~~gl~~~L~~Pv~r~~  111 (373)
T 3hhm_B           89 -NESLAQYNPKLDVKLLYPVSKYQ  111 (373)
T ss_dssp             -HSCGGGSCTTCCCCCCEECCSCC
T ss_pred             -hCCccccCCCCCcccCCCCCCcc
Confidence             11222  3788999999998743

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.69  E-value=4.9e-17  Score=115.58  Aligned_cols=90  Identities=16%  Similarity=0.147  Sum_probs=64.2

Q ss_pred             CCCCC-CCCHHHHHHhHhc--CCcccEEEeeCCCCCCEEEEEEeCCE---eeEEeeee-e--cc-----cccccccCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVAA--GGEGCFLVRPSSSSEPLTLTLWYGGR---AYNIFIRK-R--DD-----NKIGLGTFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~~~~~~lsv~~~~~---v~hy~I~~-~--~~-----k~i~~n~~L~~   66 (128)
                      ++||| .|+|++||++|..  +.||+||||+|+.+|.|+|||+.++.   |+||+|++ .  ..     .+++.+..++.
T Consensus        12 ~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~~~~~~~~~~F~s   91 (174)
T 3qwx_X           12 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPD   91 (174)
T ss_dssp             GGGEETTCCHHHHHHHHHSTTCCTTEEEEEECSSTTCEEEEEECCSSSSCEEEEEEEECCCCTTSSSCCCEEETTEEESS
T ss_pred             CCCccCCCCHHHHHHHHhccCCCCCeEEEEecCCCCCEEEEEEECCCCCceEEEEEEeccCCCCCcccceEEECCeecCc
Confidence            47999 8999999999944  57899999999338999999999999   99999987 2  22     34444433332


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      ...  +.++++.+.. .++.+..+|..
T Consensus        92 l~e--Lv~~y~~~~~-~~~~L~~P~~~  115 (174)
T 3qwx_X           92 IPA--LLNHFKMRVL-TEASLLAAYKK  115 (174)
T ss_dssp             HHH--HHHHTTSSCS-SSCCCCEECCC
T ss_pred             HHH--HhhhhhcCcc-ccccccccccc
Confidence            221  2224444443 66778888865

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.68  E-value=2.1e-17  Score=126.94  Aligned_cols=89  Identities=17%  Similarity=0.171  Sum_probs=68.4

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeee-----------------c-cccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKR-----------------D-DNKIGL   60 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~-----------------~-~k~i~~   60 (128)
                      ++||| .|+|++||++|+.+.+|+||||+|++ +|.|+|||+.++.|+||+|.+.                 . ..+++.
T Consensus        11 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (304)
T 2eyz_A           11 SSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG   90 (304)
T ss_dssp             SSSCCCCCCSSHHHHTTTTCCSSCEECCSCCSSSSCCEEEECSSSSCEEEECCCCSSCCSSCCCCCCCSSSSSCCCCCBT
T ss_pred             CCCccCCCCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEeeccccccccccccccccccCCCeEEeC
Confidence            58999 89999999999878999999999987 8999999999999999999982                 2 233343


Q ss_pred             c---cCCCHHHHHHHHHhhcCCCCCCCcccCCcccccC
Q psy9697          61 G---TFKPNEVMAAREDATNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        61 n---~~L~~~~r~~~~~l~~l~~~~~~~rl~nrC~~tg   95 (128)
                      +   .++++.+.     +++.+... .+.|..+|....
T Consensus        91 ~~~F~sl~~LV~-----~y~~~~l~-~~~L~~P~~~~~  122 (304)
T 2eyz_A           91 DQEFDSLPALLE-----FYKIHYLD-TTTLIEPVSRSR  122 (304)
T ss_dssp             TBCCSCHHHHHT-----TTTTSCCS-SSSSCCBCCSCS
T ss_pred             CcEECCHHHHHH-----HhhhCccc-cceecccccccc
Confidence            3   33333333     55555543 578888887654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.66  E-value=9.5e-17  Score=127.89  Aligned_cols=123  Identities=19%  Similarity=0.255  Sum_probs=92.8

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeecc-cccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDD-NKIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~-k~i~~n----~~L~~   66 (128)
                      ++||| .|+|++||++|.  .+.+|+||||+|+. +|.|+|||+.     ++.|+||+|++... ++++..    .++++
T Consensus        65 ~~w~~g~~~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~  144 (452)
T 1fmk_A           65 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQ  144 (452)
T ss_dssp             STTEEETCCHHHHHHHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHH
T ss_pred             cccccCCccHHHHHHHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHH
Confidence            58999 899999999993  35789999999987 8999999997     67899999998654 444332    23333


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccccCCC-Ccc-ccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVITSRP-RGV-VLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~tgr~-~g~-~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      .+.     +++...++..+++..+|...... .++ ...|++.+..|  .+.+++|.++-|.++.|
T Consensus       145 Li~-----~y~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~  205 (452)
T 1fmk_A          145 LVA-----YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTW  205 (452)
T ss_dssp             HHH-----HHTTCCTTSSSCCCEECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEE
T ss_pred             HHH-----HhhhccccchhhccccccccccccCCCCccccccChhHceeeeeecCCCCeEEEEEEE
Confidence            332     56678888888999999754221 233 36688888755  67899999999998754

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.66  E-value=4e-16  Score=127.49  Aligned_cols=110  Identities=21%  Similarity=0.231  Sum_probs=79.5

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccc-cc---cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIG-LG---TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~-~n---~~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++| ..+.||+||||+|++ +|.|+|||+.++.|+||+|...+..+.+ .+   .+|++.+.    
T Consensus         2 ~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~----   77 (532)
T 2b3o_A            2 VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVE----   77 (532)
T ss_dssp             CTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSSSEEEEEEEETTEEEEEEEECSSSCEEETTSCEESCHHHHHH----
T ss_pred             CCceeCCCCHHHHHHHHHhcCCCCCEEEecCCCCCCceEEEEEECCEEEEEEEEecCCEEEECCCcccCCHHHHHH----
Confidence            58999 89999999999 455899999999987 8999999999999999999875555533 22   45555554    


Q ss_pred             HhhcCC------CCCCCcccCCcccccCCCCccccccC-CCHHHHHHhhc
Q psy9697          74 DATNHP------RDSHPCRTQPRCVITSRPRGVVLRWR-LSRIMFRHLAD  116 (128)
Q Consensus        74 ~l~~l~------~~~~~~rl~nrC~~tgr~~g~~~~~~-l~R~~fr~~~~  116 (128)
                       +++.+      +++.++.|+.+|.... |..-.=.++ ++|..--+++.
T Consensus        78 -~y~~~~~~l~~~~g~~~~L~~P~~~~~-p~~~~w~~g~i~r~~Ae~lL~  125 (532)
T 2b3o_A           78 -YYTQQQGVLQDRDGTIIHLKYPLNCSD-PTSERWYHGHMSGGQAETLLQ  125 (532)
T ss_dssp             -HHHTTCSCBCCSSSCCBCCCEECCCCC-GGGCTTBCTTCCHHHHHHHHH
T ss_pred             -HHHhcccccccccCchhhccccccccc-cccccccccccchHHHHHHHh
Confidence             33332      3788888998887532 322111233 99997755553

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.65  E-value=2.9e-16  Score=129.80  Aligned_cols=89  Identities=26%  Similarity=0.371  Sum_probs=72.0

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecc-ccccc-c---cCCCHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDD-NKIGL-G---TFKPNEVMAAR   72 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~-n---~~L~~~~r~~~   72 (128)
                      ++||| .|+|++||++|.  .+++|+||||+|+.+|.|+|||..++.|+||+|++... ++++. +   .++++.+.   
T Consensus       161 ~~wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~---  237 (613)
T 2ozo_A          161 MPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE---  237 (613)
T ss_dssp             STTBCTTCCHHHHHHHHSSSCCCTTCEEEEECSSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHHHH---
T ss_pred             CCccccCCCHHHHHHHHhhcCCCCceEEEEecCCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHHHH---
Confidence            58999 899999999994  45899999999955899999999999999999997654 44433 2   44445554   


Q ss_pred             HHhhcCCCCCCCcccCCccccc
Q psy9697          73 EDATNHPRDSHPCRTQPRCVIT   94 (128)
Q Consensus        73 ~~l~~l~~~~~~~rl~nrC~~t   94 (128)
                        +++...++.+++|..+|...
T Consensus       238 --~y~~~~~~l~~~L~~pC~~~  257 (613)
T 2ozo_A          238 --YLKLKADGLIYCLKEACPNS  257 (613)
T ss_dssp             --HHHHCCTTCSSCCCSBCCC-
T ss_pred             --HHhhCCCCceeccccccccc
Confidence              66688899999999999763

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.64  E-value=8.7e-16  Score=127.12  Aligned_cols=112  Identities=21%  Similarity=0.259  Sum_probs=77.2

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccc-cc---cCCCHHHH-HHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIG-LG---TFKPNEVM-AAR   72 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~-~n---~~L~~~~r-~~~   72 (128)
                      +|||| +|+|++||++| ..+.||+||||+|++ +|.|+|||++++.|+||+|...+..+++ .+   .+|++.+. +..
T Consensus         2 ~~Wy~g~isr~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv~~y~~   81 (595)
T 3ps5_A            2 VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQ   81 (595)
T ss_dssp             CSCCCSSCCHHHHHHHHHHHCCTTCEEEEECSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHT
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCEEEEeecCCCCCceEEEEEECCEEEEEEEEeCCCcEEEecCccccchhhhhhhhcc
Confidence            58999 89999999999 566899999999987 8999999999999999999977666633 33   44444444 111


Q ss_pred             HHhhcCCCCCCCcccCCcccccCCCCccccc--c-CCCHHHHHHhh
Q psy9697          73 EDATNHPRDSHPCRTQPRCVITSRPRGVVLR--W-RLSRIMFRHLA  115 (128)
Q Consensus        73 ~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~--~-~l~R~~fr~~~  115 (128)
                      ..+.....++.++.+..+|.... |.  ...  + .++|..--+++
T Consensus        82 ~~~~l~~~~g~~i~L~~P~~~~~-p~--~~~Wy~g~~~r~eAe~lL  124 (595)
T 3ps5_A           82 QQGVLQDRDGTIIHLKYPLNCSD-PT--SERWYHGHMSGGQAETLL  124 (595)
T ss_dssp             TSSCCBCSSCCBCCCCCBCCCCC-SC--CSTTEEESCCHHHHHHHH
T ss_pred             Ccccccccccccccccccccccc-cc--ccccccccCCHHHHHHHH
Confidence            10111235567777777776422 11  122  2 39999775554

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.63  E-value=1.7e-16  Score=129.19  Aligned_cols=123  Identities=19%  Similarity=0.255  Sum_probs=91.2

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeecc-cccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDD-NKIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~-k~i~~n----~~L~~   66 (128)
                      ++||| .|+|++||++|+  .+.+|+||||+|+. +|.|+|||+.     ++.|+||+|++... ++++..    .++.+
T Consensus       148 ~~wy~g~i~r~~ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~e  227 (535)
T 2h8h_A          148 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQ  227 (535)
T ss_dssp             STTBCCSCCHHHHHHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHH
T ss_pred             cceeccccCHHHHHHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHH
Confidence            58999 899999999993  35789999999987 8999999997     56899999998654 444332    33333


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccccCCC-Ccc-ccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVITSRP-RGV-VLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~tgr~-~g~-~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      .+.     +++...++..+++...|...... .++ ...|++.+..|  .+.+++|.|+-|.++.|
T Consensus       228 Lv~-----~y~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~  288 (535)
T 2h8h_A          228 LVA-----YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTW  288 (535)
T ss_dssp             HHH-----HHHHCCTTSSSCCCEECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSEEEEEEEE
T ss_pred             hhe-----eeccccCccccccccccccccccccccCccceecchhhhhhheecccCCCeEEEEEEE
Confidence            333     44567788888888888753211 233 36788888755  77899999999988754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.63  E-value=1.3e-16  Score=126.96  Aligned_cols=126  Identities=19%  Similarity=0.211  Sum_probs=92.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc-cCCCHHHHHHHHHhhc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG-TFKPNEVMAAREDATN   77 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n-~~L~~~~r~~~~~l~~   77 (128)
                      ++||| .|+|++||++|....+|+||||+|++ +|.|+|||.+++.|+||+|.....++++.. ..++...  .+.+.+.
T Consensus        80 ~~wyhg~i~r~~ae~~L~~~~~G~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~i~~~~~F~sl~--eLv~~y~  157 (450)
T 1k9a_A           80 MPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLM--QLVEHYT  157 (450)
T ss_dssp             CTTBCTTCCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHH--HHHHHHH
T ss_pred             ccccccCcCHHHhhhhhccCCCceEEEEecCCCCCceEEEEEeCCeeeEEEEEecCCceEeccccccccHH--HHHhhhc
Confidence            58999 79999999999766789999999987 899999999999999999976666554433 2222221  1222444


Q ss_pred             CCCCCCCcccCCcccccCCCC---cc-ccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          78 HPRDSHPCRTQPRCVITSRPR---GV-VLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        78 l~~~~~~~rl~nrC~~tgr~~---g~-~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      ...++..+++..+|...+...   .+ ...|.+....|  .+.++.|.++-|.++.|
T Consensus       158 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~  214 (450)
T 1k9a_A          158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY  214 (450)
T ss_dssp             HCCTTSSSCCCEECCCTTCEEHHHHHHHTTCBCCGGGEEEEEEEEECSSEEEEEEEE
T ss_pred             ccccchhhhccccccccCcccchhhhcccccccChHHeEEEeeecCcCCeeEEEEEe
Confidence            567778888888888765432   11 24577776654  67899999999988753

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.63  E-value=2.4e-16  Score=121.08  Aligned_cols=90  Identities=14%  Similarity=0.115  Sum_probs=62.9

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCCCCCEEEEEEeCCE---eeEEeeee-ec-------ccccccccCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSSSEPLTLTLWYGGR---AYNIFIRK-RD-------DNKIGLGTFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~~~~~~lsv~~~~~---v~hy~I~~-~~-------~k~i~~n~~L~~   66 (128)
                      ++||| .|+|++||++|.  .+.+|+||||+|+.+|.|+|||+.+++   |+||+|++ ..       .++++.+..++.
T Consensus        41 ~~Wyhg~i~R~~Ae~lL~~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~g~~~~~~~~F~S  120 (308)
T 3qwy_A           41 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPD  120 (308)
T ss_dssp             GGGEETTCCHHHHHHHHHSTTCCTTEEEEEECSSTTCEEEEEECCSSSSCEEEEEEEECCCCTTTTCCCCEEETTEEESS
T ss_pred             cccccCCCCHHHHHHHHhccCCCCceEEEEccCCCCCEEEEEEeCCCCCceEEEEEeeccCCCcCcccceEEEeCeeeCC
Confidence            47999 899999999994  468999999999338999999999999   99999988 53       345554433333


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      ...  +..+++.... ..+.+..+|..
T Consensus       121 l~e--Lv~~y~~~~~-~~~~L~~P~~~  144 (308)
T 3qwy_A          121 IPA--LLNHFKMRVL-TEASLLAAYKK  144 (308)
T ss_dssp             HHH--HHHHHHHSCS-SSCCCCEECCC
T ss_pred             HHH--HHHHHhhccc-ccchhcccccc
Confidence            221  1112222222 35567777754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.63  E-value=3.7e-16  Score=124.42  Aligned_cols=126  Identities=16%  Similarity=0.208  Sum_probs=91.4

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeecc-cccccc-cCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDD-NKIGLG-TFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~-k~i~~n-~~L~~~~r   69 (128)
                      ++||| .|+|++||++|  ..+.+|+||||+|+. +|.|+|||..     ++.|+||+|...+. ++++.. ..++... 
T Consensus        70 ~~W~~g~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~-  148 (454)
T 1qcf_A           70 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ-  148 (454)
T ss_dssp             STTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHH-
T ss_pred             ccccccccchhhhhhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHH-
Confidence            58999 89999999988  346899999999987 8999999998     77899999998654 444332 2222221 


Q ss_pred             HHHHHhhcCCCCCCCcccCCcccccCCCCc-cccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          70 AAREDATNHPRDSHPCRTQPRCVITSRPRG-VVLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        70 ~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g-~~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                       .+...++...++...++..+|........ ....|++.+..|  .+.+++|.++-|.++.|
T Consensus       149 -eLv~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~  209 (454)
T 1qcf_A          149 -ELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATY  209 (454)
T ss_dssp             -HHHHHHTSSCTTSSSCCCSBCCCCCCCCCCCTTCSBCCGGGEEEEEEEECCSSEEEEEEEE
T ss_pred             -HHHHHHHhccCCccccccccccccCccccccccceeechHHeEEEEEcccCCceEEEEEEE
Confidence             11124455667777778888876443222 236788888755  78899999999988753

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.43  E-value=2.5e-17  Score=126.47  Aligned_cols=87  Identities=18%  Similarity=0.142  Sum_probs=67.1

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc---cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG---TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n---~~L~~~~r~~~~~   74 (128)
                      ++||| .|+|++||++|....+|+||||+|++ +|.|+|||++++.|+||+|.+... .+++.+   .+|++.+.     
T Consensus        12 ~~Wyhg~isR~~Ae~lL~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~Lv~-----   86 (303)
T 2lqn_A           12 SAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLE-----   86 (303)
Confidence            58999 89999999999666999999999987 899999999999999999998544 444443   44444444     


Q ss_pred             hhcCCCCCCCcccCCcccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~   93 (128)
                      +++.... ..+.|+.+|..
T Consensus        87 ~y~~~~~-~~~~L~~P~~r  104 (303)
T 2lqn_A           87 FYKIHYL-DTTTLIEPAPR  104 (303)
Confidence            3333333 35788888876

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.58  E-value=3e-15  Score=123.86  Aligned_cols=94  Identities=18%  Similarity=0.151  Sum_probs=71.2

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCC---------EeeEEeeeeecccccccc----cCC
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGG---------RAYNIFIRKRDDNKIGLG----TFK   64 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~---------~v~hy~I~~~~~k~i~~n----~~L   64 (128)
                      ++||| .|+|++||++| ..+.+|+||||+|++ +|.|+|||++++         .|+||+|...+.++++.+    ++|
T Consensus       108 ~~Wy~g~~~r~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~~~~~~~~~~~F~sl  187 (595)
T 3ps5_A          108 ERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSL  187 (595)
T ss_dssp             STTEEESCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCBBSSSSCCBSSH
T ss_pred             cccccccCCHHHHHHHHhccCCCceEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEEeCCEEEEcCCcCCCCH
Confidence            47999 89999999999 677899999999987 899999999988         899999988666665433    344


Q ss_pred             CHHHHHHHHHhhcCCCCCCCcccCCcccccC
Q psy9697          65 PNEVMAAREDATNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        65 ~~~~r~~~~~l~~l~~~~~~~rl~nrC~~tg   95 (128)
                      ++.+. ++..-.-...++..+.|+.+|..|.
T Consensus       188 ~~LV~-~y~~~~l~~~~g~~~~L~~p~~~t~  217 (595)
T 3ps5_A          188 TDLVE-HFKKTGIEEASGAFVYLRQPYYATR  217 (595)
T ss_dssp             HHHHH-HHHHSCBCCTTSCCBCCCEECCCCC
T ss_pred             HHHHH-HHhcCCccccCCcEEEeeccccccc
Confidence            44443 2221122345677889999997654

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.58  E-value=8.1e-15  Score=119.61  Aligned_cols=109  Identities=23%  Similarity=0.253  Sum_probs=75.7

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccccc-c---cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGL-G---TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~-n---~~L~~~~r~~~~   73 (128)
                      .+||| .|+|++||++| ....||+||||+|++ +|.|+||++.++.|+||+|...+..+.+. +   .+|++.+.    
T Consensus         4 ~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLv~----   79 (525)
T 2shp_A            4 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQ----   79 (525)
T ss_dssp             STTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHH----
T ss_pred             CCcccCCCCHHHHHHHHHhCCCCCcEEeeccCCCCCcEEEEEEECCEEEEEEEEecCCeEEECCCCeECCHHHHHH----
Confidence            48999 89999999999 556899999999987 89999999999999999998765555332 2   44555554    


Q ss_pred             HhhcCC------CCCCCcccCCcccccCCCCcccccc-CCCHHHHHHhh
Q psy9697          74 DATNHP------RDSHPCRTQPRCVITSRPRGVVLRW-RLSRIMFRHLA  115 (128)
Q Consensus        74 ~l~~l~------~~~~~~rl~nrC~~tgr~~g~~~~~-~l~R~~fr~~~  115 (128)
                       ++..+      +++..+.++.+|... .|....=.+ .++|..--+++
T Consensus        80 -~y~~~~~~l~~~~g~~i~L~~Pv~~~-dp~~~~w~~g~~~r~~Ae~lL  126 (525)
T 2shp_A           80 -YYMEHHGQLKEKNGDVIELKYPLNCA-DPTSERWFHGHLSGKEAEKLL  126 (525)
T ss_dssp             -HHHTCTTCSBSSSSCBCCCCEECCCC-CCTTCTTBCCSCCHHHHHHHH
T ss_pred             -HHHhCCcccccccccccccccccccc-ccccceeecccCCHHHHHHHH
Confidence             32222      245567777777642 232211112 38998664444

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.58  E-value=6.7e-16  Score=120.07  Aligned_cols=117  Identities=15%  Similarity=0.208  Sum_probs=66.3

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccccccccCC---CHHHHHHHHHhh
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLGTFK---PNEVMAAREDAT   76 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n~~L---~~~~r~~~~~l~   76 (128)
                      ++||| .|+|++||++|.  .+|+||||+|++.+.|+|||..++.|+||+|++.+..+......+   ++.+.+....-.
T Consensus        13 ~~wyhg~i~r~~a~~lL~--~~G~flvR~s~~~~~~~lsv~~~~~~~h~~i~~~~~~~~~~~~~F~sl~~LI~~y~~~~~   90 (377)
T 3cbl_A           13 QLWYHGAIPRAEVAELLV--HSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQ   90 (377)
T ss_dssp             CTTBCTTCCHHHHHHHCC--STTEEEEEECC--CCEEEEC-----CCEEEC----CCCCC----CCSHHHHHHHHHHHTC
T ss_pred             CCccCCCCCHHHHHHHHh--cCCCEEEEEeCCCCcEEEEEEECCCccchhhccccceEEecceeccchHHHHHHHhhccC
Confidence            58999 799999999996  579999999987339999999999999999998766555544333   333331111011


Q ss_pred             cCCCCCCCcccCCcccccCCCCccccccCCCHHHH--HHhhccCCCCceEeccC
Q psy9697          77 NHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMF--RHLADYNKLSGVQRAMW  128 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~f--r~~~~~G~~~gv~k~~W  128 (128)
                      .+.+. +...+.+++.        ...|.+.+..|  .+.+++|.++-|.++.|
T Consensus        91 ~l~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~  135 (377)
T 3cbl_A           91 PLTKK-SGVVLHRAVP--------KDKWVLNHEDLVLGEQIGRGNFGEVFSGRL  135 (377)
T ss_dssp             CC------CCCCEECC--------CCTTBCCGGGEEEEEEEEEETTEEEEEEEE
T ss_pred             Ccccc-cCcccccCcc--------ccccEEchHHeEEeeEeccCCCCeEEEEEE
Confidence            11111 1111111111        14577776644  67899999999988753

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=8.3e-15  Score=99.68  Aligned_cols=75  Identities=20%  Similarity=0.191  Sum_probs=53.6

Q ss_pred             CcccEEEeeCCCCCCEEEEEEeC--CEeeEEeeeeecccccccc----cCCCHHHHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          20 GEGCFLVRPSSSSEPLTLTLWYG--GRAYNIFIRKRDDNKIGLG----TFKPNEVMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        20 ~~G~FlvR~s~~~~~~~lsv~~~--~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      .||+||||+|+.+|.|+|||+.+  +.|+||+|++.+.++++.+    .+|++.+. .+. -+.++.. ..+.|+.+|..
T Consensus        43 ~dG~FLVR~S~~~g~y~LSv~~~~~~~vkH~rI~~~~~~~~i~~~~~F~sL~eLV~-hY~-~~~l~~~-~~~~L~~P~~~  119 (126)
T 2cr4_A           43 QDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMVE-HYH-THVLPSH-QSLLLRHPYGY  119 (126)
T ss_dssp             CTTCEEEEECSSTTCEEEEEEETTTTEECCEECEEETTEEESSSSCEESSHHHHHH-HHT-TSCCSSS-SSCCCCSBSSC
T ss_pred             CCCeEEEEecCCCCCEEEEEEeCCCCCEEEEEEEECCCeEEEcCCccCCCHHHHHH-HHh-hCCcCCC-CCEEeCCcCCC
Confidence            46999999999789999999999  9999999998877665533    45555554 111 2334433 34678888886


Q ss_pred             cCCC
Q psy9697          94 TSRP   97 (128)
Q Consensus        94 tgr~   97 (128)
                      +..|
T Consensus       120 ~~~~  123 (126)
T 2cr4_A          120 TSGP  123 (126)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            6544

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.51  E-value=3.3e-14  Score=115.99  Aligned_cols=94  Identities=20%  Similarity=0.240  Sum_probs=70.5

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCC----------EeeEEeeeeeccccccc-c---cC
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGG----------RAYNIFIRKRDDNKIGL-G---TF   63 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~----------~v~hy~I~~~~~k~i~~-n---~~   63 (128)
                      ++||| +++|++||++| ....+|+||||+|++ +|.|+||+..++          .|+||+|...+.++.+. +   .+
T Consensus       110 ~~w~~g~~~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~~~~F~s  189 (525)
T 2shp_A          110 ERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDS  189 (525)
T ss_dssp             CTTBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSS
T ss_pred             ceeecccCCHHHHHHHHhccCCCceEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEecCCeEEECCCceeCc
Confidence            47999 89999999999 445899999999987 899999999987          89999999886666543 2   34


Q ss_pred             CCHHHHHHHHHhhcCC-CCCCCcccCCcccccCC
Q psy9697          64 KPNEVMAAREDATNHP-RDSHPCRTQPRCVITSR   96 (128)
Q Consensus        64 L~~~~r~~~~~l~~l~-~~~~~~rl~nrC~~tgr   96 (128)
                      +++.+. ++. -..++ .++..+.|+.+|..+.-
T Consensus       190 L~eLV~-~y~-~~~l~~~~g~~~~L~~P~~~t~i  221 (525)
T 2shp_A          190 LTDLVE-HYK-KNPMVETLGTVLQLKQPLNTTRI  221 (525)
T ss_dssp             HHHHHH-HHH-HSCCBCTTSCBCCCCEECCCSCE
T ss_pred             HHHHHH-hhh-ccCccccCCeEEEeecccccccc
Confidence            444443 222 12222 26778899999987644

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.50  E-value=6.1e-14  Score=114.60  Aligned_cols=96  Identities=18%  Similarity=0.107  Sum_probs=71.5

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCC---------EeeEEeeeeeccccccc-c---cCC
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGG---------RAYNIFIRKRDDNKIGL-G---TFK   64 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~---------~v~hy~I~~~~~k~i~~-n---~~L   64 (128)
                      ++||| .|+|++||++| ..+.+|+||||+|++ +|.|+|||..++         .|+||+|...+.++++. .   .++
T Consensus       108 ~~w~~g~i~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~~g~~~l~~~~~F~sl  187 (532)
T 2b3o_A          108 ERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSL  187 (532)
T ss_dssp             CTTBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEEC----CCEEEEEEEEBCCTTSBBSSSSCCBSSH
T ss_pred             ccccccccchHHHHHHHhcCCCCceEEEecCCCCCCceEEEEEecCccccccCCCceEEEEEEEcCCceeeCCCcccCcH
Confidence            48999 79999999999 567889999999987 899999999887         89999999876655543 2   344


Q ss_pred             CHHHHHHHHHhhcC-CCCCCCcccCCcccccCCCC
Q psy9697          65 PNEVMAAREDATNH-PRDSHPCRTQPRCVITSRPR   98 (128)
Q Consensus        65 ~~~~r~~~~~l~~l-~~~~~~~rl~nrC~~tgr~~   98 (128)
                      ++.+. ++. -..+ ..++..+.|+.+|..+.-+.
T Consensus       188 ~eLV~-~y~-~~~l~~~~g~~~~L~~P~~~t~i~~  220 (532)
T 2b3o_A          188 TDLVE-HFK-KTGIEEASGAFVYLRQPYYATRVNA  220 (532)
T ss_dssp             HHHHH-HHH-HHCEECSSSCEECCCEECCCCCCCC
T ss_pred             HHHHh-hcc-ccCccccCCeeEecccccccccchh
Confidence            44443 222 1112 24678889999998765443

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.48  E-value=6.1e-14  Score=113.05  Aligned_cols=57  Identities=30%  Similarity=0.422  Sum_probs=49.1

Q ss_pred             CCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc
Q psy9697           3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG   61 (128)
Q Consensus         3 W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n   61 (128)
                      ||| .|+|++||++|. +.||+||||+|++ +|.|+|||++++.|+||+|.+ +.++++.+
T Consensus        53 w~hg~i~r~~ae~lL~-~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~-~g~~~~~~  111 (463)
T 3cxl_A           53 EFHGMISREAADQLLI-VAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYY-DGKHFVGE  111 (463)
T ss_dssp             TBCCSCCHHHHHHHHT-TSTTEEEEEECSSSTTCEEEEEECSSSEEEEECEE-SSSEESSS
T ss_pred             ccccCCCHHHHHHHHc-CCCCeEEEeccCCCCCCEEEEEEECCEEEEEEEec-CCeEEECC
Confidence            449 799999999994 3689999999987 899999999999999999987 55565544

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.43  E-value=9.7e-15  Score=115.14  Aligned_cols=57  Identities=26%  Similarity=0.368  Sum_probs=0.0

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK   57 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~   57 (128)
                      .|||| .|+|.+||++|..+.+|+||||+|+.+|.|+|||++++.|+||+|.+.+.++
T Consensus       301 ~~WyhG~isR~~AE~LL~~~~~G~FLVR~Ss~~g~y~LSv~~~~~v~H~~I~~~~~g~  358 (373)
T 3hhm_B          301 KTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGY  358 (373)
T ss_dssp             ----------------------------------------------------------
T ss_pred             CCCcCCCCCHHHHHHHhccCCCCcEEEEecCCCCCEEEEEEECCeEEEEEEEEcCCCc
Confidence            37999 8999999999976689999999994499999999999999999999876544

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.34  E-value=2.9e-12  Score=93.23  Aligned_cols=55  Identities=24%  Similarity=0.523  Sum_probs=50.3

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD   55 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~   55 (128)
                      .+||| .|+|++||++| ....+|+||||+|++ +|.|+||+..++.|+||+|.+...
T Consensus        58 ~~w~~g~isr~~ae~lL~~~~~~G~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~  115 (217)
T 1gri_A           58 HPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGA  115 (217)
T ss_dssp             CSSBCTTCCHHHHHHHHHTCSSTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECSS
T ss_pred             chhhcccCCHHHHHHHHhccCCCceEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCC
Confidence            47999 89999999999 667899999999987 899999999999999999987755

>2xzm_N RPS29E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_N

Probab=99.19  E-value=1.2e-11  Score=72.21  Aligned_cols=35  Identities=17%  Similarity=0.372  Sum_probs=32.9

Q ss_pred             CCcccCCcccccCCCCccccccC--CCHHHHHHhhcc
Q psy9697          83 HPCRTQPRCVITSRPRGVVLRWR--LSRIMFRHLADY  117 (128)
Q Consensus        83 ~~~rl~nrC~~tgr~~g~~~~~~--l~R~~fr~~~~~  117 (128)
                      .++++.|+|..||||+|++++|+  |||++|||+|..
T Consensus        12 ~~~r~~nrC~~cGr~rg~iRkfgl~lcR~cFRe~A~~   48 (55)
T 2xzm_N           12 NYGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPH   48 (55)
T ss_dssp             TSSGGGCCCTTTCCSSTTCCCSSSCCCHHHHHHHHHH
T ss_pred             CCCCCceEeecCCCCcchHHHhCCchhhHHHHHHHHH
Confidence            36899999999999999999999  999999999975

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.02  E-value=5.2e-10  Score=80.03  Aligned_cols=67  Identities=12%  Similarity=0.095  Sum_probs=53.5

Q ss_pred             CCCCCCCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEE-eCCEeeEEeeeeecccccccc---cCCCHHH
Q psy9697           1 MAWFHSVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLW-YGGRAYNIFIRKRDDNKIGLG---TFKPNEV   68 (128)
Q Consensus         1 ~~W~~~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~-~~~~v~hy~I~~~~~k~i~~n---~~L~~~~   68 (128)
                      +|+|+++|..|||++|.. .+|.|+||+|+.++.++||+. .++.+.|+.|.-.+..+++.+   .+|.+.+
T Consensus        14 HP~F~n~s~~qAe~~L~~-~~G~~liRPSsk~~~ltit~Kv~d~~~~Hi~I~E~~k~l~ig~~~fedLDElI   84 (178)
T 2xp1_A           14 HPLFKNFNVTESENYLRS-STDDFLIRKGSRHGYCVLVIKFASDVFVHMKIEEHSEHYTCSNKHFEDIDEVI   84 (178)
T ss_dssp             STTEECCCHHHHHHHHHH-SSCCEEEEECSSTTEEEEEEEEETTEEEEEEEEECSSCEEETTEEESSHHHHH
T ss_pred             CCCcCCCCHHHHHHHHhc-CCCCEEEeecCCCCcEEEEEEECCCcEEEEEEEECCCEEEECCcEECCHHHHH
Confidence            589999999999999955 469999999988777999998 589999999987665555544   4444433

>3j20_P 30S ribosomal protein S14P type Z; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=98.95  E-value=7e-10  Score=64.85  Aligned_cols=35  Identities=20%  Similarity=0.240  Sum_probs=31.8

Q ss_pred             CCcccCCcccccCCCCccccccCC--CHHHHHHhhcc
Q psy9697          83 HPCRTQPRCVITSRPRGVVLRWRL--SRIMFRHLADY  117 (128)
Q Consensus        83 ~~~rl~nrC~~tgr~~g~~~~~~l--~R~~fr~~~~~  117 (128)
                      ..++-.|+|..||||+|++++|+|  ||++|||+|..
T Consensus        13 ~~grg~~rC~vcGr~~g~iRkfGL~~cR~cfRe~A~~   49 (56)
T 3j20_P           13 KFGKGARRCIRCGQYGPIIRIQGLMLCRHCFREVAPK   49 (56)
T ss_dssp             SSSSTTCCCSSSCCSSSCCCTTTCCCCHHHHHHHHHH
T ss_pred             ccCCCceEeecCCCCcccccccCChHHHHHHHHHHHh
Confidence            346778999999999999999999  99999999975

>3iz6_N 40S ribosomal protein S29 (S14P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_n

Probab=98.85  E-value=8.9e-10  Score=64.48  Aligned_cols=33  Identities=21%  Similarity=0.366  Sum_probs=30.4

Q ss_pred             cccCCcccccCCCCccccccCC--CHHHHHHhhcc
Q psy9697          85 CRTQPRCVITSRPRGVVLRWRL--SRIMFRHLADY  117 (128)
Q Consensus        85 ~rl~nrC~~tgr~~g~~~~~~l--~R~~fr~~~~~  117 (128)
                      .+-.|+|..||||+|++++|+|  ||++|||+|..
T Consensus        15 G~g~~rC~vcGr~~g~iRkfGL~~cR~cfRe~A~~   49 (56)
T 3iz6_N           15 GAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKD   49 (56)
T ss_dssp             CCCCCCCSSCCCSCCCTTTTSCTTHHHHHHTTCCS
T ss_pred             CCCcceeecCCCCcccccccCCcHHHHHHHHHHHh
Confidence            4567999999999999999999  99999999976

>3u5c_d S36, YS29, 40S ribosomal protein S29-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_N 3o30_S 3o2z_S 3u5g_d 3jyv_N* 1s1h_N

Probab=98.78  E-value=1.6e-09  Score=63.30  Aligned_cols=33  Identities=21%  Similarity=0.455  Sum_probs=30.5

Q ss_pred             cccCCcccccCCCCccccccC--CCHHHHHHhhcc
Q psy9697          85 CRTQPRCVITSRPRGVVLRWR--LSRIMFRHLADY  117 (128)
Q Consensus        85 ~rl~nrC~~tgr~~g~~~~~~--l~R~~fr~~~~~  117 (128)
                      .+-.|+|..||||+|++++|+  |||++|||+|..
T Consensus        15 G~gs~rC~vcGr~~g~iRkfGl~lcR~cfRe~A~~   49 (56)
T 3u5c_d           15 GKGSRQCRVCSSHTGLIRKYGLNICRQCFREKAND   49 (56)
T ss_dssp             SGGGCCCTTTCCCSSEECGGGCCEEHHHHHHHHHH
T ss_pred             CCCcceeecCCCCcccccccCcchhHHHHHHHHHh
Confidence            466799999999999999999  999999999975

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=98.09  E-value=4.5e-06  Score=67.30  Aligned_cols=51  Identities=12%  Similarity=0.199  Sum_probs=44.8

Q ss_pred             CCCCC-CCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeC---CEeeEEeeee
Q psy9697           2 AWFHS-VNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYG---GRAYNIFIRK   52 (128)
Q Consensus         2 ~W~~~-i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~---~~v~hy~I~~   52 (128)
                      .|+|. |+|++|+++|.....|+||+|.|++ +|.|+++....   +.|+||-|.-
T Consensus       352 g~I~GFIsk~ea~~lL~~~~~GTFLLRFSeS~~GgitIsyV~~d~~~~~kh~~v~p  407 (473)
T 1uur_A          352 GIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQP  407 (473)
T ss_dssp             TSSCBSCCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCG
T ss_pred             CcEEEEecHHHHHHHhhCCCCCeEEEEeccCCCceEEEEEEeecCCCceeEEEecC
Confidence            47784 9999999999777889999999998 89999999873   6899998874

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=97.07  E-value=0.00058  Score=56.51  Aligned_cols=45  Identities=24%  Similarity=0.387  Sum_probs=37.3

Q ss_pred             CC-CCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeC---CEeeEEe
Q psy9697           5 HS-VNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYG---GRAYNIF   49 (128)
Q Consensus         5 ~~-i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~---~~v~hy~   49 (128)
                      +. |+|++|+++|.....|+||+|.|++ .|.|+++....   ..|+|.+
T Consensus       468 ~Gfisk~~a~~~L~~~~~GtFLlRFSds~~G~~tisyv~~~~~~~v~~v~  517 (585)
T 1y1u_A          468 LGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSPDRNLWNLK  517 (585)
T ss_dssp             CBSCCHHHHHHHHHTSCTTCEEEEEETTSTTEEEEEECCSSCCSSCSEEE
T ss_pred             EEeccHHHHHHHHhCCCCCceEEEeccCCcCcEEEEEEecCCCceeEeec
Confidence            44 9999999999878889999999998 89999998773   3455543

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=96.49  E-value=0.0034  Score=52.76  Aligned_cols=45  Identities=24%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             CCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEe---CC-EeeEEeee
Q psy9697           7 VNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWY---GG-RAYNIFIR   51 (128)
Q Consensus         7 i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~---~~-~v~hy~I~   51 (128)
                      |+|++|+.+|+....|+||+|.|++  .|.+|++-..   ++ .+.++-+.
T Consensus       582 IsK~~a~~lL~~~~~GTFLLRFSdS~~~Ggitia~V~~~~~~~~~~v~~v~  632 (683)
T 1yvl_A          582 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVE  632 (683)
T ss_dssp             CCHHHHHHHHSSSCSSCEEEEECSSCSSCEEEEEEEECCC---CCEEEEBC
T ss_pred             ecHHHHHHHHhCCCCCeEEEecCCCCCCCceEEEEEeccCCCccceEEecC
Confidence            9999999999888899999999976  6888888776   34 55555443

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=96.06  E-value=0.0089  Score=42.35  Aligned_cols=52  Identities=19%  Similarity=0.232  Sum_probs=37.9

Q ss_pred             CCCCCCCCHHHHHHhH-hcCCc-ccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeec
Q psy9697           1 MAWFHSVNRERAVQMV-AAGGE-GCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRD   54 (128)
Q Consensus         1 ~~W~~~i~r~~ae~ll-~~~~~-G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~   54 (128)
                      .+||+. ++++||++| .++.+ -.|.++.|.. ||.|+|++. .+.+.|-.|.-.+
T Consensus       101 h~kf~~-s~~~~e~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~-~~~~~~e~i~V~~  155 (178)
T 2xp1_A          101 HAKYFN-SPEDAEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYN-NGSILEEYIGVSD  155 (178)
T ss_dssp             STTBCS-CTTTSHHHHHTCCSSSCEEEEEECSSSTTEEEEEEE-SSSEEEEEEEESS
T ss_pred             CCccCC-CHHHHHHHHHHhCCCCceEEEEecCCCCCeEEEEEc-CCCCceeeEEEcc
Confidence            478988 999999999 44322 2488999976 999999987 6667665554443

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=95.83  E-value=0.0013  Score=54.37  Aligned_cols=46  Identities=24%  Similarity=0.304  Sum_probs=37.6

Q ss_pred             CCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEe---CCEeeEEeeee
Q psy9697           7 VNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWY---GGRAYNIFIRK   52 (128)
Q Consensus         7 i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~---~~~v~hy~I~~   52 (128)
                      |+|++|+++|.....|+||+|.|++  .|.++++-..   ++.+.|+-|.-
T Consensus       463 isk~~a~~lL~~~~~GTFLlRFSes~~~Ggitis~v~~~~~g~~~~~~v~P  513 (596)
T 1bg1_A          463 ISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP  513 (596)
T ss_dssp             CCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCCC
T ss_pred             ecHHHHHHHHhCCCCCeeEEeecCCCCCCcEEEEEEecCCCCceeEEecCC
Confidence            9999999999888889999999987  7989988766   34566665553

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=95.72  E-value=0.0072  Score=49.84  Aligned_cols=45  Identities=24%  Similarity=0.309  Sum_probs=35.8

Q ss_pred             CCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEeC---C-EeeEEeee
Q psy9697           7 VNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWYG---G-RAYNIFIR   51 (128)
Q Consensus         7 i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~~---~-~v~hy~I~   51 (128)
                      |++++|+.+|+....|+||+|.|++  .|..+++-...   + .+.++-+.
T Consensus       447 IsK~~a~~lL~~~~~GTFLLRFSdS~~~GgITia~V~~~~~~~~~~v~~v~  497 (575)
T 1bf5_A          447 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVE  497 (575)
T ss_dssp             CCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSSSCCCCEECC
T ss_pred             ecHHHHHHHHhCCCCCeEEEecCCCCCCCcEEEEEEecCCCCccceeEecC
Confidence            8999999999888899999999986  68888888663   3 54444443

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=94.97  E-value=0.066  Score=41.09  Aligned_cols=45  Identities=9%  Similarity=0.157  Sum_probs=36.9

Q ss_pred             CC-CCCHHHHHHhHhc--CCcccEEEeeCCC-CCCEEEEEEeC-CEeeEE
Q psy9697           4 FH-SVNRERAVQMVAA--GGEGCFLVRPSSS-SEPLTLTLWYG-GRAYNI   48 (128)
Q Consensus         4 ~~-~i~r~~ae~ll~~--~~~G~FlvR~s~~-~~~~~lsv~~~-~~v~hy   48 (128)
                      |. -+|=+||.+.|+.  .+-|+|++|-|.+ +|.|+++.... +.|.|=
T Consensus       246 y~aFlTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~~~~I~qt  295 (329)
T 3bux_B          246 YMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQT  295 (329)
T ss_dssp             BCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTSCEEEE
T ss_pred             hhheeeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECCCCceeee
Confidence            44 4899999999955  6889999999987 99999998874 556553

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=94.21  E-value=0.096  Score=40.02  Aligned_cols=44  Identities=11%  Similarity=0.261  Sum_probs=35.6

Q ss_pred             CC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEeC-CEeeE
Q psy9697           4 FH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWYG-GRAYN   47 (128)
Q Consensus         4 ~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~~-~~v~h   47 (128)
                      |. -+|=+||.+.|+  ..+-|+|++|.|.+ +|.|+++.... +.|.|
T Consensus       231 y~aFlTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s~g~I~q  279 (323)
T 3op0_A          231 YMAFLTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSSDGSILQ  279 (323)
T ss_dssp             BCTTCCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECTTSCEEE
T ss_pred             eeeeeeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcCCCceee
Confidence            44 499999999994  56789999999987 99999998874 34433

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=92.58  E-value=0.022  Score=50.80  Aligned_cols=51  Identities=22%  Similarity=0.300  Sum_probs=0.0

Q ss_pred             CCCCCCCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEe-CCEeeEEeee
Q psy9697           1 MAWFHSVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWY-GGRAYNIFIR   51 (128)
Q Consensus         1 ~~W~~~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~-~~~v~hy~I~   51 (128)
                      +|-||+++=.|||+.|.....|-++||+|+. +...++|..- ++...|+-|.
T Consensus      1024 HP~F~n~~~~qAe~~L~~~~~Gd~vIRPSSkG~dhLtvTwKv~d~vyqHidV~ 1076 (1219)
T 3psi_A         1024 HPYYFPFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQ 1076 (1219)
T ss_dssp             -----------------------------------------------------
T ss_pred             CCCCCCCCHHHHHHHHhcCCCCCEEEeecCCCCCceEEEEEEcCCcEEEEEEE
Confidence            4778899999999999777779999999987 5667777654 5667888776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	128
d2qaln1	100	g.39.1.7 (N:1-100) Ribosomal protein S14 {Escheric	1e-14
d2uubn1	60	g.39.1.7 (N:2-61) Ribosomal protein S14 {Thermus t	2e-13
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	1e-08
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	4e-08
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	1e-07
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	2e-07
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	2e-07
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	3e-07
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	3e-07
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	3e-07
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	5e-07
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	6e-07
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	6e-07
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	9e-07
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	2e-06
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	3e-06
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	3e-06
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	3e-06
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	3e-06
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	3e-06
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	4e-06
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	4e-06
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	5e-06
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	1e-05
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	1e-05
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	4e-05
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	1e-04
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	2e-04
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	2e-04
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	7e-04
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	0.001
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	0.001
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	0.001
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	0.002
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	0.002

>d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli [TaxId: 562]} Length = 100

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Ribosomal protein S14
domain: Ribosomal protein S14
species: Escherichia coli [TaxId: 562]

 Score = 62.9 bits (153), Expect = 1e-14
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 67  EVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRA 126
           +   A       PRDS P R + RC  T RP G + ++ LSRI  R  A   ++ G+++A
Sbjct: 39  DRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKA 98

Query: 127 MW 128
            W
Sbjct: 99  SW 100

>d2uubn1 g.39.1.7 (N:2-61) Ribosomal protein S14 {Thermus thermophilus [TaxId: 274]} Length = 60

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Ribosomal protein S14
domain: Ribosomal protein S14
species: Thermus thermophilus [TaxId: 274]

 Score = 58.5 bits (142), Expect = 2e-13
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 70  AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
           A  E A   P+     R   RCV   R R V   + L RI  R LA   +L GV++A W
Sbjct: 4   ALIEKAKRTPKF--KVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 60

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.3 bits (112), Expect = 1e-08
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIG 59
            W   S NR +A  ++    +G FLVR SS       ++   G   +  I K       
Sbjct: 9  KTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGF 68

Query: 60 LG 61
            
Sbjct: 69 AE 70

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 4e-08
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDNKIGL 60
          W+   ++R+ AV ++     G FLVR SS+S     L++    R  +  I          
Sbjct: 2  WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 61

Query: 61 GTFKP 65
           +   
Sbjct: 62 PSPAQ 66

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-07
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 3   WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLG 61
           WFH +++RE A  ++ +   G FL+R S S    TL+        +  ++  DD    + 
Sbjct: 11  WFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIP 70

Query: 62  TFKP--NEVMAAREDATNHPRDSHPCR-TQP 89
             K     + A        P +      TQP
Sbjct: 71  GEKVAHTSLDALVTFHQQKPIEPRRELLTQP 101

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 2e-07
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDN 56
          W+   ++RE   + +    +G FLVR +S+      TLTL  GG   +I I  RD  
Sbjct: 13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGK 69

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.5 bits (105), Expect = 2e-07
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDNKIG 59
          +    +++ER   +++    G FL+R S SS+   +T T      + +  I+  +     
Sbjct: 9  YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYTKQ 68

Query: 60 LGTFKP 65
                
Sbjct: 69 QLNNMS 74

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 3e-07
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 3   WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
            +   +++  A  ++    EG FL+R S+  +   +++     R+ +  I  + ++    
Sbjct: 13  CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE-QWNHNFSF 71

Query: 61  GTFKPNEVMAAR-EDATNHPRDSHPCRTQPRCVITSRPR 98
               P    +        H +D   C      + T   R
Sbjct: 72  DAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIR 110

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 3e-07
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
            WFH  ++RE + +++   G  +G FL+R S S+     LTL +  +  N  I   +D+
Sbjct: 5  QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDD 64

Query: 57 KIGLGTFKPNE 67
               +     
Sbjct: 65 GQTFFSLDDGN 75

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.3 bits (102), Expect = 3e-07
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
          WFH  ++R +A  ++     G F++R S SS    ++++ +     +  + +       L
Sbjct: 8  WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFL 67

Query: 61 GT 62
           T
Sbjct: 68 WT 69

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 5e-07
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
          M WFH  ++ + AVQ +    +G FLVR S+       L + +G    +  +  RD +
Sbjct: 4  MPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGH 61

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 6e-07
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
          M W+H S+ RE A + + +G   +G FL+RP        L+L YG   Y+  I +    K
Sbjct: 29 MPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGK 88

Query: 58 IGLG 61
            + 
Sbjct: 89 YCIP 92

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 6e-07
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
            W+  S+    A + +    EG FL+R SS S+  LT+++       N+ I  +D  
Sbjct: 15 TGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK 72

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 9e-07
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 3  WFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
          WFH ++    A  ++   G  G FL RPS S+   LTL++   G   +I I+   D 
Sbjct: 5  WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDY 61

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.7 bits (95), Expect = 2e-06
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 3  WFH-SVNRERAVQMVAAGG---EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          WFH +++R +A Q+V AGG    G F++R S +      LT  + G+A ++ +      +
Sbjct: 7  WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQ 66

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 3e-06
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
           FH  ++RE+A +++  G EG +++R S       TL L +G +  N  +     + +G 
Sbjct: 37 EFHGIISREQADELLG-GVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGE 95

Query: 61 GTFK 64
            F+
Sbjct: 96 KRFE 99

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 3e-06
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
          M WFH  + RE+A +++     G FLVR S++     TL +   G+  +  I        
Sbjct: 4  MPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLS 63

Query: 59 GLG 61
             
Sbjct: 64 IDE 66

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.8 bits (95), Expect = 3e-06
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
           +W+H  V+R  A  ++++G  G FLVR S SS    +++L Y GR Y+  I    D K+
Sbjct: 5  HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 64

Query: 59 GLGT 62
           + +
Sbjct: 65 YVSS 68

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.8 bits (95), Expect = 3e-06
 Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 1   MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
           + ++H  + +     ++  GG +G FL+R S S    L L + +    Y+  I +     
Sbjct: 3   LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGY 62

Query: 58  --IGLGTFKPNEVMAAREDATNH---PRDSHPCR-TQP 89
             I      P  +    ++  +    P        + P
Sbjct: 63  YRIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLSNP 100

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 3e-06
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          +A +H  ++RE   +++ A G +G +L+R S S      L + Y G  Y   + + +   
Sbjct: 4  VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGS 63

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 4e-06
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
          MAWF   + R +A +M++     G FL+R S S+    +L++ +G    +  + +    K
Sbjct: 3  MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGK 62

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 4e-06
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 1   MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
           M WFH  ++RE + Q+V  G    G FL+R   ++    L L + G+  +  I K    K
Sbjct: 29  MPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGK 88

Query: 58  IGLGTFKPNEVMAAREDATNHPRDSHPCR-TQP 89
           + +   K  + +    +  ++  D      T P
Sbjct: 89  LSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVP 121

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.4 bits (94), Expect = 5e-06
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRK 52
            W++ S++R++A +++   G EG F+VR S +    T++++           K
Sbjct: 6  YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIK 59

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 1e-05
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
            WFH  ++RE + +++   G  +G FLVR S  +     L+L +  +  +  I   ++ 
Sbjct: 10 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEE 69

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.2 bits (91), Expect = 1e-05
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 1  MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKI 58
            W+H S+ R +A  M+      G FLVR  +      ++    G+  +  +++     +
Sbjct: 9  KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVM 68

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 4e-05
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 3  WFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEPL-TLTLWYGGRAYNIFIRKRDDN 56
          WFH  ++ + A +++   G+ G FLVR S S      L++  G         K    
Sbjct: 2  WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVT 58

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 1e-04
 Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
          + +F+ S++R  A + +   G  +G FL+R    S     L+L +  R ++  I ++ + 
Sbjct: 6  LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNG 65

Query: 57 KIGLG 61
             + 
Sbjct: 66 TYAIA 70

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 36.5 bits (84), Expect = 2e-04
 Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 5/86 (5%)

Query: 3  WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNI--FIRKRDDNKI 58
            +  + R+     +     G F++R S  +     +          I  ++ + +D   
Sbjct: 11 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAA 70

Query: 59 GLGTFKPNEVMAAREDATNHPRDSHP 84
             TF P+ +    +           
Sbjct: 71 AKKTF-PDFLSEHSQFVNLLQWTKDT 95

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 1   MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIR--KRD 54
             WF  +++R+ A + + A G   G FL+R S S+    +L++    +     ++  K  
Sbjct: 4   EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIR 63

Query: 55  DNKIGLGTFKPNEVMAAREDATNHPRD---------SHPCRT 87
           +   G     P        +   H  +         S PC+T
Sbjct: 64  NLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQT 105

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 7e-04
 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 10/97 (10%)

Query: 3   WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSS---EPLTLTLWYGGRAYNIFIRKRDDN 56
           W+   + R+ A + + + G   G FL+R S ++     L++  W   +  ++   K    
Sbjct: 8   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 67

Query: 57  KIGLGTFKPNEVMAAREDATNH---PRDSHPCR-TQP 89
             G             +    H          R   P
Sbjct: 68  DNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVP 104

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 10/99 (10%)

Query: 3   WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIR--KRDDNK 57
           WF  +++R+ A + + A     G FL+R S S++                ++  K     
Sbjct: 14  WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 58  IGLGTFKPNEVMAAREDATNHPR---DSHPCR-TQPRCV 92
            G     P       +    H     D    + T P CV
Sbjct: 74  NGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLP-CV 111

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (77), Expect = 0.001
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 1  MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRD 54
            WFH  ++R  A  ++     G FLVR S+++     LT    G+  ++ +   +
Sbjct: 7  EPWFHGKLSRREAEALLQL--NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE 60

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 1  MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
          + +F  ++ RE A   +  GG  +G +L+R S +      L++ +G +A++  I +  + 
Sbjct: 5  LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNG 64

Query: 57 KIGLGTFKP 65
             +   + 
Sbjct: 65 TYAIAGGRT 73

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.002
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 3  WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIR 51
          WF   ++R+ A + + A G   G F++R S +++   +L++          ++
Sbjct: 3  WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVK 55

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.002
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 3  WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSS-EPLTLTLWYGGRAYNIFIRKRDDNKI 58
          W+   + R  + +++       G FLVR S ++     L++     A  + ++     K+
Sbjct: 7  WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 66

Query: 59 GLGTF 63
            G F
Sbjct: 67 DSGGF 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	128
d2qaln1	100	Ribosomal protein S14 {Escherichia coli [TaxId: 56	99.97
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.91
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.9
d2uubn1	60	Ribosomal protein S14 {Thermus thermophilus [TaxId	99.9
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.89
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.88
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.87
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.87
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.87
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.87
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.86
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.86
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.86
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.85
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.85
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.84
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.84
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.83
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.83
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.83
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.82
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.81
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.8
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.79
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.78
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.78
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.77
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.76
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.75
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.75
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.74
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.73
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.72
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.68
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.44
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	99.01
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	97.11

>d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Ribosomal protein S14
domain: Ribosomal protein S14
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.4e-32  Score=175.19  Aligned_cols=84  Identities=31%  Similarity=0.477  Sum_probs=74.0

Q ss_pred             eeEEeeeeecccccccccCCCHHHH-HHHHHhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCce
Q psy9697          45 AYNIFIRKRDDNKIGLGTFKPNEVM-AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGV  123 (128)
Q Consensus        45 v~hy~I~~~~~k~i~~n~~L~~~~r-~~~~~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv  123 (128)
                      |..|..++..+++++.|.++|.+++ ....+|+++|+|++||+++|||+.||||+||+++|+|||++||++|+.|+||||
T Consensus        16 ~~ky~~kR~~Lk~i~~n~~l~~e~r~~a~~kL~~LPrnss~tRirnRC~~TGR~Rg~~r~f~lsRi~fR~la~~G~lpGv   95 (100)
T d2qaln1          16 ADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGL   95 (100)
T ss_dssp             HHHTGGGTGGGTTTTTSSCC----CCHHHHHHTTTTSTTCSTTCCCCCSSSCCSSSCBTTTTBCHHHHHHHHHHTCSTTC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCccchhHHHHhhhccCCCcceeeccccchHHHHHHHHHcCCCCCe
Confidence            4557788889999999999999999 444449999999999999999999999999999999999999999999999999


Q ss_pred             EeccC
Q psy9697         124 QRAMW  128 (128)
Q Consensus       124 ~k~~W  128 (128)
                      +||||
T Consensus        96 ~KaSW  100 (100)
T d2qaln1          96 KKASW  100 (100)
T ss_dssp             EECCC
T ss_pred             eccCC
Confidence            99999

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.2e-25  Score=142.29  Aligned_cols=93  Identities=23%  Similarity=0.251  Sum_probs=75.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc-cCCCHHHHHHHHHhhc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG-TFKPNEVMAAREDATN   77 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n-~~L~~~~r~~~~~l~~   77 (128)
                      ||||| .|+|++||++|...++|+||||+|++ +|.|+|||+.++.|+||+|...+.++++.+ ..++..  ..+.++++
T Consensus         4 ~PWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl--~~LV~~y~   81 (101)
T d1k9aa2           4 MPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENL--MQLVEHYT   81 (101)
T ss_dssp             CTTBCTTCCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSH--HHHHHHHH
T ss_pred             CCccCCCCCHHHHHHHHcCCCCCCEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCCCceecCCcccCCH--HHHHHHHh
Confidence            89999 89999999999777899999999987 899999999999999999998877665433 223322  22333666


Q ss_pred             CCCCCCCcccCCcccccC
Q psy9697          78 HPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        78 l~~~~~~~rl~nrC~~tg   95 (128)
                      .++++.+++|+.||...|
T Consensus        82 ~~~~gl~~~L~~P~~~~~   99 (101)
T d1k9aa2          82 TDADGLCTRLIKPKVMEG   99 (101)
T ss_dssp             HCCTTSSSCCCEECCCTT
T ss_pred             hCCCCCceeCCccccCCC
Confidence            778999999999998765

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-24  Score=140.15  Aligned_cols=91  Identities=21%  Similarity=0.262  Sum_probs=73.1

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc-cCCCHHHHHHHHHhhc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG-TFKPNEVMAAREDATN   77 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n-~~L~~~~r~~~~~l~~   77 (128)
                      ||||| .|+|++||++|+...||+||||+|++ +|.|+|||+.++.|+||+|.+.+.++++.+ ..++...  .+.++++
T Consensus         4 ~PWy~g~isR~eAe~~L~~~~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~--~LI~~y~   81 (97)
T d1jwoa_           4 MPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLM--DMVEHYS   81 (97)
T ss_dssp             CTTEEESCCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEESSSEESSTTSCCBSCHH--HHHHHHH
T ss_pred             CCccCCCCCHHHHHHHhcCCCCCeEEEEecCCCCccEEEEEEecCceEEEEEEEcCCcEEecCCcccCCHH--HHHHHHh
Confidence            89999 89999999999777899999999987 899999999999999999988766665433 3333222  2222556


Q ss_pred             CCCCCCCcccCCcccc
Q psy9697          78 HPRDSHPCRTQPRCVI   93 (128)
Q Consensus        78 l~~~~~~~rl~nrC~~   93 (128)
                      .++++.+++|..||.+
T Consensus        82 ~~~~~L~~~L~~P~~k   97 (97)
T d1jwoa_          82 KDKGAICTKLVRPKRK   97 (97)
T ss_dssp             HCCTTSSSCCCCBCCC
T ss_pred             hCCCCCCccCCccCcC
Confidence            7888999999999863

>d2uubn1 g.39.1.7 (N:2-61) Ribosomal protein S14 {Thermus thermophilus [TaxId: 274]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Ribosomal protein S14
domain: Ribosomal protein S14
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=6e-25  Score=129.23  Aligned_cols=53  Identities=38%  Similarity=0.617  Sum_probs=49.8

Q ss_pred             HhhcCCCCCCCcccCCcccccCCCCccccccCCCHHHHHHhhccCCCCceEeccC
Q psy9697          74 DATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW  128 (128)
Q Consensus        74 ~l~~l~~~~~~~rl~nrC~~tgr~~g~~~~~~l~R~~fr~~~~~G~~~gv~k~~W  128 (128)
                      ++.++|++  +||++|||+.||||+|++++|+|||++||++|..|+||||+||||
T Consensus         8 k~~~~pk~--~tR~~NRC~~tGR~Rg~~r~F~lsR~~fR~la~~G~ipGv~KaSW   60 (60)
T d2uubn1           8 KAKRTPKF--KVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW   60 (60)
T ss_dssp             GGCSCCSS--GGGCCCCCTTTCCCSSBCTTTSCBHHHHHHHHHHTCSTTCEECCC
T ss_pred             HHhcCCCC--CcccceeccCCCCCceeecccccHHHHHHHHHHcCCCCCeeecCC
Confidence            36678875  699999999999999999999999999999999999999999999

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.4e-23  Score=136.91  Aligned_cols=87  Identities=16%  Similarity=0.232  Sum_probs=72.2

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc-ccccc---------cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN-KIGLG---------TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k-~i~~n---------~~L~~~   67 (128)
                      ||||| .|+|++||++| +.+.||+||||+|++ +|.|+|||+.++.|+||+|.+...+ +.+..         +++.+.
T Consensus         3 ~PWy~g~isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~L   82 (103)
T d1i3za_           3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQEL   82 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHH
T ss_pred             CCcccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHH
Confidence            79999 89999999999 667899999999987 8999999999999999999876654 33321         355555


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      +.     +++.+.++++++|..||.
T Consensus        83 V~-----~y~~~~~gl~~~L~~P~~  102 (103)
T d1i3za_          83 VS-----KYGKPGQGLVVHLSNPIM  102 (103)
T ss_dssp             HH-----HTTSSSSSSSSCCCEECC
T ss_pred             HH-----HhhhCCCCCeEeCCcccc
Confidence            54     777888999999999985

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.1e-23  Score=139.86  Aligned_cols=91  Identities=18%  Similarity=0.232  Sum_probs=72.7

Q ss_pred             CCCCC-CCCHHHHHHhH-hc-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc-cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AA-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG-TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n-~~L~~~~r~~~~~   74 (128)
                      ||||| .|+|++||++| .. ..||+||||+|++ +|.|+|||++++.|+||+|.+... .+++.+ ..++..  ..+.+
T Consensus         5 ~PWyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl--~eLV~   82 (129)
T d1a81a1           5 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASP--ADLCH   82 (129)
T ss_dssp             STTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSH--HHHHH
T ss_pred             CCcccCCCCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCH--HHHHH
Confidence            79999 89999999999 33 4899999999987 899999999999999999987765 444432 333322  22333


Q ss_pred             hhcCCCCCCCcccCCcccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~   93 (128)
                      +++.+.+++|++|..+|..
T Consensus        83 ~Y~~~~~gl~~~L~~P~~~  101 (129)
T d1a81a1          83 YHSQESDGLVCLLKKPFNR  101 (129)
T ss_dssp             HHTTCCTTSSSCCCEECCC
T ss_pred             HHhhCCCCCcccCCCCCCC
Confidence            7778889999999999964

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1e-22  Score=137.02  Aligned_cols=90  Identities=24%  Similarity=0.336  Sum_probs=70.7

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecc-cccccc-cCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG-TFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n-~~L~~~~r~~~~~l   75 (128)
                      ||||| .|+|++||++|.  ..+||+||||+|+++|.|+|||+++++|+||+|.+... .+++.+ ..++..  ..+.++
T Consensus        29 ~pWyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl--~~LV~~  106 (124)
T d2oq1a2          29 MPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTL--WQLVEY  106 (124)
T ss_dssp             STTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSH--HHHHHH
T ss_pred             CCCccCCCCHHHHHHHHhhcCCCCceEEeEecCCCCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCH--HHHHHH
Confidence            68999 899999999994  34899999999977889999999999999999988765 444433 222222  223336


Q ss_pred             hcCCCCCCCcccCCccc
Q psy9697          76 TNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        76 ~~l~~~~~~~rl~nrC~   92 (128)
                      ++.+++++|++|+.+|.
T Consensus       107 y~~~~~gL~~~L~~PcP  123 (124)
T d2oq1a2         107 LKLKADGLIYCLKEACP  123 (124)
T ss_dssp             HHHCCTTSSSCCCSBCC
T ss_pred             HhhCCCCCcccCCCcCc
Confidence            66778999999999996

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.7e-22  Score=131.99  Aligned_cols=88  Identities=25%  Similarity=0.367  Sum_probs=68.7

Q ss_pred             CCCCC-CCCHHHHHHhHh-c-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc----ccccc-----cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVA-A-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN----KIGLG-----TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k----~i~~n-----~~L~~~   67 (128)
                      +|||| +|+|++||++|. . .+||+||||+|++ +|.|+|||+.+++|+||+|......    +.+.+     +++.+.
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~L   84 (105)
T d1nrva_           5 QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQL   84 (105)
T ss_dssp             STTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHH
T ss_pred             CcccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCcccCCHHHH
Confidence            68999 899999999993 3 4799999999987 8999999999999999999876432    22222     233333


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +     ++++.+++++|++|+.||..
T Consensus        85 V-----~~y~~~~~~L~~~L~~Pc~r  105 (105)
T d1nrva_          85 V-----DFYQLNKGVLPCKLKHHCIR  105 (105)
T ss_dssp             H-----HHHTTCCTTSSSCCCEECCC
T ss_pred             H-----HHhccCcCCCCccCCcCCCC
Confidence            3     37778889999999999963

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.8e-22  Score=135.92  Aligned_cols=91  Identities=21%  Similarity=0.240  Sum_probs=71.5

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeeccc-ccccc-cCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDN-KIGLG-TFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k-~i~~n-~~L~~~~r~~~~~l   75 (128)
                      ||||| +|+|++||++|  ....||+||||+|+.+|.|+|||++++.|+||+|.+.+.+ +++.+ ..++..  ..+.++
T Consensus        29 ~pWyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL--~~LI~~  106 (125)
T d1a81a2          29 MPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTL--WQLVEH  106 (125)
T ss_dssp             STTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCH--HHHHHH
T ss_pred             CCccCCCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCH--HHHHHH
Confidence            68999 89999999988  3458999999999878899999999999999999987664 44432 222222  223336


Q ss_pred             hcCCCCCCCcccCCcccc
Q psy9697          76 TNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        76 ~~l~~~~~~~rl~nrC~~   93 (128)
                      ++.++++++++|+.||.+
T Consensus       107 y~~~~~gL~~~L~~P~~k  124 (125)
T d1a81a2         107 YSYKADGLLRVLTVPCQK  124 (125)
T ss_dssp             HTTCCTTSSSCCCCBCCC
T ss_pred             HhhCCCCCCccCCeeCCC
Confidence            677889999999999975

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.5e-22  Score=137.28  Aligned_cols=92  Identities=21%  Similarity=0.245  Sum_probs=72.2

Q ss_pred             CCCCC-CCCHHHHHHhHh-c-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc-ccccc-cCCCHHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVA-A-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN-KIGLG-TFKPNEVMAARED   74 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k-~i~~n-~~L~~~~r~~~~~   74 (128)
                      ||||| .|+|++||++|+ . +.||+||||+|++ +|.|+|||+.+++|+||+|++.+.+ +.+.+ ..++..  ..+.+
T Consensus         6 ~pWy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl--~~Lv~   83 (130)
T d2oq1a1           6 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGP--AELCE   83 (130)
T ss_dssp             CTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSH--HHHHH
T ss_pred             CCCccCCCCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCH--HHHHH
Confidence            69999 899999999994 3 4899999999987 8999999999999999999877654 43433 333332  22333


Q ss_pred             hhcCCCCCCCcccCCccccc
Q psy9697          75 ATNHPRDSHPCRTQPRCVIT   94 (128)
Q Consensus        75 l~~l~~~~~~~rl~nrC~~t   94 (128)
                      +++.+++++|++|+.+|...
T Consensus        84 ~Y~~~~~gL~~~L~~P~~r~  103 (130)
T d2oq1a1          84 FYSRDPDGLPCNLRKPCNRP  103 (130)
T ss_dssp             HHHHCCTTSSSCCCSBCCCC
T ss_pred             HHhhCCCCCCccCCccCCCC
Confidence            66677899999999999753

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=3.5e-22  Score=129.67  Aligned_cols=91  Identities=24%  Similarity=0.308  Sum_probs=72.2

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc-ccccc-cCCCHHHHHHHHHhh
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN-KIGLG-TFKPNEVMAAREDAT   76 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k-~i~~n-~~L~~~~r~~~~~l~   76 (128)
                      +|||| .|+|++||++|+...||+||||+|++ +|.|+||++.++.|+||+|.+...+ +++.+ ..++..  ..+.+++
T Consensus         5 ~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl--~~LI~~y   82 (101)
T d1opka2           5 HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTL--AELVHHH   82 (101)
T ss_dssp             STTEEEECCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSH--HHHHHHH
T ss_pred             CcccCCCCCHHHHHHHhcCCCCCeEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCH--HHHHHHH
Confidence            58999 89999999999878899999999987 8999999999999999999987653 43322 222221  2233377


Q ss_pred             cCCCCCCCcccCCcccc
Q psy9697          77 NHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~   93 (128)
                      ..+.++.++.|+.||..
T Consensus        83 ~~~~~~l~~~L~~P~pr   99 (101)
T d1opka2          83 STVADGLITTLHYPAPK   99 (101)
T ss_dssp             TTCCTTSSSCCCEECCC
T ss_pred             hhCCCCCceECCCccCC
Confidence            78889999999999964

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.1e-22  Score=130.70  Aligned_cols=88  Identities=24%  Similarity=0.263  Sum_probs=70.7

Q ss_pred             CCCCC-CCCHHHHHHhH-hc-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecc-cccccc----cCCCHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AA-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDD-NKIGLG----TFKPNEVMAA   71 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~-k~i~~n----~~L~~~~r~~   71 (128)
                      +|||| .|+|++||++| +. ..||+||||+|++ +|.|+|||+++++|+||+|.+... ++++.+    +++.+.+.  
T Consensus         2 epWy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~--   79 (100)
T d1rjaa_           2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVN--   79 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHH--
T ss_pred             CCCcCCCCCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHHH--
Confidence            59999 89999999999 33 4799999999987 899999999999999999987765 454432    44444443  


Q ss_pred             HHHhhcCCCCCCCcccCCcccc
Q psy9697          72 REDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        72 ~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                         +++...++.+++|+.||..
T Consensus        80 ---~y~~~~~~~~~~L~~Pc~~   98 (100)
T d1rjaa_          80 ---YHRAQSLSHGLRLAAPCRK   98 (100)
T ss_dssp             ---HHHHCCTTSSSCCCSBCCC
T ss_pred             ---HHhhCCCCCccCcCeecCC
Confidence               5556677889999999964

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.5e-22  Score=128.58  Aligned_cols=88  Identities=22%  Similarity=0.298  Sum_probs=70.6

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccc-cc------c---cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKI-GL------G---TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i-~~------n---~~L~~~   67 (128)
                      +|||| .|+|++||++| +...||+||||+|++ +|.|+||+..++.|+||+|.+...+.+ +.      .   +++++.
T Consensus         4 ~pwyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~L   83 (104)
T d1d4ta_           4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNL   83 (104)
T ss_dssp             CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHH
T ss_pred             CCccccCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEecCCCceEEEEEEcCCCcEEEeeccCCCCcccCCHHHH
Confidence            69999 89999999999 566789999999987 899999999999999999998766443 21      1   333333


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +     ++++.+.++.++.|+.||.+
T Consensus        84 i-----~~y~~~~~gl~~~L~~P~~r  104 (104)
T d1d4ta_          84 I-----SAFQKPDQGIVIPLQYPVEK  104 (104)
T ss_dssp             H-----HHHTSSSSSSSSCCCEECCC
T ss_pred             H-----HHHhhCCCCCcEeCCccccC
Confidence            3     36677888999999998863

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.4e-22  Score=128.17  Aligned_cols=89  Identities=19%  Similarity=0.271  Sum_probs=70.6

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeeccc-ccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDDN-KIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~k-~i~~n----~~L~~   66 (128)
                      ++||| +|+|++||++|  ..++||+||||+|++ +|.|+|||+.     ++.|+||+|++...+ +++..    +++++
T Consensus         1 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~   80 (103)
T d1qcfa2           1 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQE   80 (103)
T ss_dssp             STTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHH
T ss_pred             CCccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHH
Confidence            58999 89999999988  445899999999987 8999999985     578999999987653 33322    33333


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCccccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCVIT   94 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~~t   94 (128)
                      .+     ++++.+.++++++|..||+.+
T Consensus        81 LV-----~~y~~~~~gL~~~L~~PC~~s  103 (103)
T d1qcfa2          81 LV-----DHYKKGNDGLCQKLSVPCMSS  103 (103)
T ss_dssp             HH-----HHHTSSCTTSSSCCCSBCCCC
T ss_pred             HH-----HHHhhCCCCCCccCCccCCCC
Confidence            33     377788899999999999863

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.6e-21  Score=128.99  Aligned_cols=88  Identities=23%  Similarity=0.335  Sum_probs=69.9

Q ss_pred             CCCCC-CCCHHHHHHhHh-c-CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc--c-c-ccc-----cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMVA-A-GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN--K-I-GLG-----TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~-~-~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k--~-i-~~n-----~~L~~~   67 (128)
                      ++||| .|+|++||++|. . .+||+||||+|++ +|.|+|||.++++|+||+|...+..  . + +.+     .++.+.
T Consensus        10 ~~Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~L   89 (113)
T d2qmsa1          10 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQL   89 (113)
T ss_dssp             CTTEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHH
T ss_pred             CCccCCCCCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHH
Confidence            58999 899999999993 3 4899999999987 8999999999999999999865432  1 2 222     233333


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +     ++++.++++.|++|+.||..
T Consensus        90 I-----~~y~~~~~~L~~~L~~pc~r  110 (113)
T d2qmsa1          90 V-----EFHQLNRGILPCLLRHCCTR  110 (113)
T ss_dssp             H-----HHHTTCCTTSSSCCCEECCS
T ss_pred             H-----HHhccCCCCCccccCCCCcC
Confidence            3     37778889999999999975

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=2.3e-21  Score=126.84  Aligned_cols=90  Identities=13%  Similarity=0.198  Sum_probs=72.1

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHHHHHHHHh
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEVMAAREDA   75 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~r~~~~~l   75 (128)
                      +|||| .|+|++||++| ..+.||+||||+|+.+|.|+|||+.++.|+||+|...+..+++.+   .++.+.+.     +
T Consensus         9 ~~Wy~g~i~R~eAe~lL~~~~~~G~FLVR~S~~~~~yvLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~-----~   83 (105)
T d2fcia1           9 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLIS-----Y   83 (105)
T ss_dssp             SCCCCSSSCSHHHHHHHHHSSSSCCEEEEECSSTTCEEEEEEETTEECCCEEBCCSSCEECSSSEESTTHHHHH-----H
T ss_pred             CCCccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCEEEEEEeccccEEEEEEecCCeEecCCcccCCHHHHHH-----H
Confidence            48999 89999999999 555789999999976899999999999999999987655555444   44544444     5


Q ss_pred             hcCCCCCCCcccCCcccccC
Q psy9697          76 TNHPRDSHPCRTQPRCVITS   95 (128)
Q Consensus        76 ~~l~~~~~~~rl~nrC~~tg   95 (128)
                      ++.+..+.+++|+.||....
T Consensus        84 y~~~~~~~~~~L~~P~~~~~  103 (105)
T d2fcia1          84 YEKHPLYRKMKLRYPINEEN  103 (105)
T ss_dssp             HHHSCCSTTCSSCCCCCCTT
T ss_pred             HhhCCCCCccCCCCCCCCCC
Confidence            55667778899999998754

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.6e-21  Score=127.34  Aligned_cols=87  Identities=21%  Similarity=0.232  Sum_probs=68.0

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEeC-----CEeeEEeeeeecc-cccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWYG-----GRAYNIFIRKRDD-NKIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~~-----~~v~hy~I~~~~~-k~i~~n----~~L~~   66 (128)
                      +|||| +|+|++||++|  ..++||+||||+|++ +|.|+||++..     ..|+||+|.+... ++++.+    .++++
T Consensus         4 ~pWy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~~   83 (105)
T d1lkka_           4 EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHE   83 (105)
T ss_dssp             CTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHH
T ss_pred             CCccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecCCcccCCHHH
Confidence            68999 89999999988  446899999999987 89999999863     3489999998765 444322    33333


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCccc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      .+.     ++..+.+++|++|+.||.
T Consensus        84 LV~-----~y~~~~~gL~~~L~~Pcp  104 (105)
T d1lkka_          84 LVR-----HYTNASDGLCTRLSRPCQ  104 (105)
T ss_dssp             HHH-----HHHHCCTTSSSCCCSBCC
T ss_pred             HHH-----HHhhCCCCCCccCCCcCC
Confidence            333     566678899999999995

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.7e-20  Score=120.87  Aligned_cols=61  Identities=25%  Similarity=0.464  Sum_probs=53.6

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc-ccccc
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN-KIGLG   61 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k-~i~~n   61 (128)
                      ||||| +|+|++||++| +.++||+||||+|++ +|.|+|||+.++.|+||+|.+...+ +++..
T Consensus         3 ~pWy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~   67 (96)
T d1jyra_           3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV   67 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCceEEEEEEECCCCeEEeCC
Confidence            89999 89999999999 556899999999987 8999999999999999999988764 44444

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.6e-21  Score=124.99  Aligned_cols=93  Identities=23%  Similarity=0.297  Sum_probs=69.3

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHH-HHH
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVM-AAR   72 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r-~~~   72 (128)
                      .+||| .|+|++||++| ..+.||+||||+|++ +|.|+|||+.++.|+||+|...+.++++.+    +++.+.+. +..
T Consensus         3 ~~Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~   82 (109)
T d2shpa2           3 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYME   82 (109)
T ss_dssp             STTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHT
T ss_pred             CccccCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHHHHHHH
Confidence            47999 89999999999 566799999999987 899999999999999999998877665433    34444443 111


Q ss_pred             HHhhcCCCCCCCcccCCcccc
Q psy9697          73 EDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        73 ~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      ..+....+++.++.|+.||..
T Consensus        83 ~~~~~~~~~~~~~~L~~P~~~  103 (109)
T d2shpa2          83 HHGQLKEKNGDVIELKYPLNC  103 (109)
T ss_dssp             CTTCSBSSSSCBCCCCEECCC
T ss_pred             CCCCcccCCCCeeeccccCCC
Confidence            111123455677888888764

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1e-20  Score=124.17  Aligned_cols=87  Identities=18%  Similarity=0.300  Sum_probs=68.2

Q ss_pred             CCCCC-CCCHHHHHHhH-hcCCcccEEEeeCCCCCCEEEEEEeC------CEeeEEeeeeeccc---ccc-cc---cCCC
Q psy9697           1 MAWFH-SVNRERAVQMV-AAGGEGCFLVRPSSSSEPLTLTLWYG------GRAYNIFIRKRDDN---KIG-LG---TFKP   65 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~~~~~~lsv~~~------~~v~hy~I~~~~~k---~i~-~n---~~L~   65 (128)
                      |+||| +|+|++||++| +..+||+||||+|+++|.|+|||+..      ..|+||+|.....+   +++ ..   ++++
T Consensus         6 ~~Wy~g~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl~   85 (108)
T d1luia_           6 YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIP   85 (108)
T ss_dssp             STTBCTTCCHHHHHHHHHHHCCTTEEEEEECCTTTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSSSCCBSSHH
T ss_pred             CCCcCCCCCHHHHHHHHHhcCCCCeEEEEecCCCCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCCCcccCCHH
Confidence            68999 89999999999 66789999999997789999999863      46899999876543   222 22   3444


Q ss_pred             HHHHHHHHHhhcCCCCCCCcccCCccc
Q psy9697          66 NEVMAAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        66 ~~~r~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      +.+.     +++.++++++++|+.||.
T Consensus        86 ~LV~-----~y~~~~~~L~~~L~~Pv~  107 (108)
T d1luia_          86 LLIQ-----YHQYNGGGLVTRLRYPVC  107 (108)
T ss_dssp             HHHH-----HHHTTCCSSSSSSSEECC
T ss_pred             HHHH-----HHhhCCCCCccCCCCcCC
Confidence            4443     666788899999999875

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=6.2e-21  Score=126.17  Aligned_cols=88  Identities=22%  Similarity=0.256  Sum_probs=69.6

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEe----CCEeeEEeeeeecc-cccccc----cCCCHH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWY----GGRAYNIFIRKRDD-NKIGLG----TFKPNE   67 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~----~~~v~hy~I~~~~~-k~i~~n----~~L~~~   67 (128)
                      +|||| +|+|++||++|  ..++||+||||+|++ +|.|+|||+.    +..|+||+|++.+. .+++..    +++.+.
T Consensus        12 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~eL   91 (114)
T d1blja_          12 EKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQAL   91 (114)
T ss_dssp             SSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHH
T ss_pred             CCCcCCCCCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeeccCCCEEEEEEEEEcCCCCEEecCCceECCHHHH
Confidence            58999 89999999988  456899999999987 8999999975    45699999998765 444322    444444


Q ss_pred             HHHHHHHhhcCCCCCCCcccCCcccc
Q psy9697          68 VMAAREDATNHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        68 ~r~~~~~l~~l~~~~~~~rl~nrC~~   93 (128)
                      +.     +++.+.++++++|+.||+.
T Consensus        92 V~-----~y~~~~~gL~~~L~~PC~~  112 (114)
T d1blja_          92 VQ-----HYSKKGDGLCQKLTLPCVN  112 (114)
T ss_dssp             HH-----HHHHCCSSSSSCCCCCSCC
T ss_pred             HH-----HHhhCCCCCCccCCccCcC
Confidence            43     5566788999999999985

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.9e-20  Score=121.48  Aligned_cols=90  Identities=20%  Similarity=0.177  Sum_probs=68.2

Q ss_pred             CCCCC-CCCHHHHHHhH--hcCCcccEEEeeCCC-CCCEEEEEEeC-----CEeeEEeeeeeccc-cccc-ccCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMV--AAGGEGCFLVRPSSS-SEPLTLTLWYG-----GRAYNIFIRKRDDN-KIGL-GTFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll--~~~~~G~FlvR~s~~-~~~~~lsv~~~-----~~v~hy~I~~~~~k-~i~~-n~~L~~~~r   69 (128)
                      +|||| .|+|++||++|  ..++||+||||+|++ +|.|+||++..     ..|+||+|.+...+ +++. +..++..  
T Consensus         5 ~~Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~~~~F~sl--   82 (106)
T d1o48a_           5 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSL--   82 (106)
T ss_dssp             STTEEESCCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSH--
T ss_pred             CCccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcCCeeECCH--
Confidence            58999 89999999999  345899999999987 89999999864     46889999887653 3332 2222221  


Q ss_pred             HHHHHhhcCCCCCCCcccCCccc
Q psy9697          70 AAREDATNHPRDSHPCRTQPRCV   92 (128)
Q Consensus        70 ~~~~~l~~l~~~~~~~rl~nrC~   92 (128)
                      ..+.++++.+.++++++|+.+|.
T Consensus        83 ~eLV~~y~~~~~gL~~~L~~pcP  105 (106)
T d1o48a_          83 QQLVAYYSKHADGLCHRLTTVCP  105 (106)
T ss_dssp             HHHHHHHTTCCTTSSSCCCSBCC
T ss_pred             HHHHHHHhhCCCCCCccCCCcCC
Confidence            22333777888999999999995

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.4e-20  Score=118.98  Aligned_cols=85  Identities=19%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             CCCCC-CCCHHHHHHhHh--cCCcccEEEeeCCC-CCCEEEEEEe-----CCEeeEEeeeeeccc-ccccc----cCCCH
Q psy9697           1 MAWFH-SVNRERAVQMVA--AGGEGCFLVRPSSS-SEPLTLTLWY-----GGRAYNIFIRKRDDN-KIGLG----TFKPN   66 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~--~~~~G~FlvR~s~~-~~~~~lsv~~-----~~~v~hy~I~~~~~k-~i~~n----~~L~~   66 (128)
                      +|||| .|+|++||++|.  .++||+||||+|++ +|.|+||+..     ++.|+||+|...+.+ +++.+    +++.+
T Consensus         6 ~~Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~   85 (104)
T d1g83a2           6 EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQ   85 (104)
T ss_dssp             SSSBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETTTEEESSHHH
T ss_pred             CCCcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecCCcccCCHHH
Confidence            68999 899999999993  35799999999987 8999999985     578999999977653 33322    44444


Q ss_pred             HHHHHHHHhhcCCCCCCCcccCCc
Q psy9697          67 EVMAAREDATNHPRDSHPCRTQPR   90 (128)
Q Consensus        67 ~~r~~~~~l~~l~~~~~~~rl~nr   90 (128)
                      .+.     +++.+.++++++|+.|
T Consensus        86 LV~-----~y~~~~~gL~~~L~~P  104 (104)
T d1g83a2          86 LVQ-----HYSERAAGLSSRLVVP  104 (104)
T ss_dssp             HHH-----HHHHCCTTSSSCCCCC
T ss_pred             HHH-----HHhhCCCCCceeCCCC
Confidence            444     6666778888877654

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=6e-20  Score=119.78  Aligned_cols=67  Identities=21%  Similarity=0.318  Sum_probs=55.8

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEVM   69 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~r   69 (128)
                      +|||| .|+|++||++|+  +||+||||+|++ +|.|+|||..++.|+||+|...+..+++.+   +++++.+.
T Consensus         7 ~pWyhG~i~R~~Ae~lL~--~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~   78 (104)
T d1mila_           7 EPWFHGKLSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLIS   78 (104)
T ss_dssp             CTTBCSSCCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHH
T ss_pred             CCCcCCCCCHHHHHHHHh--cCCcEEEEecCCCCCCEEEEEEEccccceEEEEeCCCEEEeCCeeECCHHHHHH
Confidence            58999 899999999994  589999999987 899999999999999999987766666555   34444444

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.5e-19  Score=118.09  Aligned_cols=58  Identities=17%  Similarity=0.244  Sum_probs=52.6

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKI   58 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i   58 (128)
                      .|||| .|+|++||++|+..+||+||||+|++ ++.|+||+..++.|+||+|...+.++.
T Consensus        11 ~~Wy~g~isR~~Ae~lL~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~   70 (112)
T d2izva2          11 NPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFS   70 (112)
T ss_dssp             CTTEEEECCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEE
T ss_pred             CCCcCCCCCHHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEecCCceEEEEEEeCCeEE
Confidence            48999 89999999999777899999999987 899999999999999999998776653

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.5e-19  Score=115.31  Aligned_cols=55  Identities=25%  Similarity=0.474  Sum_probs=50.5

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN   56 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k   56 (128)
                      +||| +|+|++||++|+..++|+||||+|++ +|.|+||+..++.|+||+|.+.+.+
T Consensus         1 sWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~~~~~LS~~~~~~v~H~~I~~~~~~   57 (109)
T d2eyva1           1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPR   57 (109)
T ss_dssp             TSCCBCCCHHHHHHHCSSCSTTCEEEECCCSSSSCEEEEEEETTEEEEEEEECCCCS
T ss_pred             CCCCCCCCHHHHHHHhcCCCCCeEEeeecCCCCCCEEEEEEECCEEEEEEEEEcCCc
Confidence            6999 89999999999777899999999987 8999999999999999999987653

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.77  E-value=3.6e-19  Score=116.32  Aligned_cols=88  Identities=20%  Similarity=0.181  Sum_probs=62.5

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeecccccccc-----cCCCHHHH-HHHHH
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLG-----TFKPNEVM-AARED   74 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n-----~~L~~~~r-~~~~~   74 (128)
                      +||| .|+|++||++|+..++|+||||+|+.+|.|+||+..+++|+||+|.+...+.+..+     .++++.+. ++.. 
T Consensus        10 ~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y~~~-   88 (107)
T d1qada_          10 TWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHT-   88 (107)
T ss_dssp             GTEEEECCHHHHHHHHTTCCTTEEEEEEC---CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHS-
T ss_pred             cccCCCCCHHHHHHHHcCCCCCcEEEEecCCCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHHHhC-
Confidence            6998 89999999999777899999999976899999999999999999998877554322     33344443 2211 


Q ss_pred             hhcCCCCCCCcccCCc
Q psy9697          75 ATNHPRDSHPCRTQPR   90 (128)
Q Consensus        75 l~~l~~~~~~~rl~nr   90 (128)
                      -.....+++++.|+.|
T Consensus        89 ~l~~~~~~l~~~L~~P  104 (107)
T d1qada_          89 SLVQHNDSLNVTLAYP  104 (107)
T ss_dssp             CGGGTCTTCCCCCCEE
T ss_pred             ccccccCCCceEcccc
Confidence            1123345667766654

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=2.8e-19  Score=117.39  Aligned_cols=91  Identities=21%  Similarity=0.207  Sum_probs=69.5

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEeCCEeeEEeeeeecccccccc----cCCCHHHHHHHH
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG----TFKPNEVMAARE   73 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n----~~L~~~~r~~~~   73 (128)
                      ++||| .|+|++||++|+..++|+||||+|++  ++.|+|++..++.|+||+|...+.++++.+    +++++.+.+ +.
T Consensus        11 ~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~~ls~~~~~~~~H~~I~~~~~~~~~~~~~~F~sl~~LV~~-y~   89 (111)
T d1fu6a_          11 AEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNSVVELINH-YR   89 (111)
T ss_dssp             CSSCCSSCCSHHHHHHSSSCSSCCCCCBSSCCSSSCCSBCEEEETTEEEECCCCCTTTCCCTTTTSCCCCTTHHHHH-HH
T ss_pred             CcCCCCCCCHHHHHHHhCcCCCCEEEEEeccCCCCccEEEEEecCCceEEEEEEEcCCeEEECCCcccCCHHHHHHH-Hh
Confidence            58999 89999999999777899999999976  468999999999999999987766665432    566666651 11


Q ss_pred             HhhcC--CCCCCCcccCCcccc
Q psy9697          74 DATNH--PRDSHPCRTQPRCVI   93 (128)
Q Consensus        74 ~l~~l--~~~~~~~rl~nrC~~   93 (128)
                       -+.+  ...+.+++|+.||..
T Consensus        90 -~~~l~~~~~~l~~~L~~Pv~r  110 (111)
T d1fu6a_          90 -NESLAQYNPKLDVKLLYPVSK  110 (111)
T ss_dssp             -TTCSTTTCSSCCCCSCCCCCC
T ss_pred             -hCcCCccCCCCccccCccccC
Confidence             1122  235678888888864

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=1.8e-18  Score=111.26  Aligned_cols=63  Identities=16%  Similarity=0.328  Sum_probs=54.4

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccc-cccccCC
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNK-IGLGTFK   64 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~-i~~n~~L   64 (128)
                      +||| +|+|++||++|...++|+||||+|++ +|.|+|||+.++.|+||+|.+...+. ++.+..+
T Consensus         7 ~Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F   72 (97)
T d1r1qa_           7 EWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKF   72 (97)
T ss_dssp             TTBCTTCCHHHHHHHHHTSCTTCEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCCB
T ss_pred             CccCCCCCHHHHHHHHhcCCCCCEEEeecCCCCCCEEEEEEecCCeEEEEEEEcCCCeEEeCCCCc
Confidence            7999 89999999999777899999999987 89999999999999999999887644 3444333

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=1.1e-18  Score=109.90  Aligned_cols=58  Identities=28%  Similarity=0.540  Sum_probs=48.1

Q ss_pred             CCCCC-CCCHHHHHHhHhc---CCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccccc
Q psy9697           1 MAWFH-SVNRERAVQMVAA---GGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKI   58 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~---~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i   58 (128)
                      +|||| .|+|++||++|+.   .+||+||||+|++ +|.|+|||+.++.|+||+|.+...+++
T Consensus         5 ~pWyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~~~~v~h~~I~~~~~~~~   67 (86)
T d1rpya_           5 YPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQC   67 (86)
T ss_dssp             STTBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEETTEEEEEEC----CCCH
T ss_pred             CcccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEECCceEEEEEEEcCCceE
Confidence            58999 8999999999943   3689999999987 899999999999999999988766554

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.2e-18  Score=110.49  Aligned_cols=87  Identities=21%  Similarity=0.287  Sum_probs=63.3

Q ss_pred             CCC-CCCHHHHHHhH-hcCCcccEEEeeCCC-CCCEEEEEEeC----------CEeeEEeeeeecccccccc----cCCC
Q psy9697           3 WFH-SVNRERAVQMV-AAGGEGCFLVRPSSS-SEPLTLTLWYG----------GRAYNIFIRKRDDNKIGLG----TFKP   65 (128)
Q Consensus         3 W~~-~i~r~~ae~ll-~~~~~G~FlvR~s~~-~~~~~lsv~~~----------~~v~hy~I~~~~~k~i~~n----~~L~   65 (128)
                      ||| .|+|++||++| ..++||+||||+|++ +|.|+|||+.+          +.|+||.|...+.++.+.+    .+++
T Consensus         2 WyhG~i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~F~sl~   81 (108)
T d2shpa3           2 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLT   81 (108)
T ss_dssp             TBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHH
T ss_pred             CCcCCCCHHHHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCCCceEeCCCcccCCHH
Confidence            999 89999999999 455899999999987 89999999985          4589999987777665433    3444


Q ss_pred             HHHHHHHHHhhcC-CCCCCCcccCCcc
Q psy9697          66 NEVMAAREDATNH-PRDSHPCRTQPRC   91 (128)
Q Consensus        66 ~~~r~~~~~l~~l-~~~~~~~rl~nrC   91 (128)
                      +.+. .+. -+.+ ..++.+++|+.||
T Consensus        82 ~LV~-~y~-~~~l~~~~g~~~~L~~Pv  106 (108)
T d2shpa3          82 DLVE-HYK-KNPMVETLGTVLQLKQPL  106 (108)
T ss_dssp             HHHH-HHH-HSCCBCTTSCBCCCCEEC
T ss_pred             HHHH-HHh-hCCCCCCCCceEEcCCCC
Confidence            4443 111 1112 2566777888776

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.3e-18  Score=109.56  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=66.0

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCCCCCEEEEEEeCCEeeEEeeeeeccc-ccccc--cCCCHHHHHHHHHhh-
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDN-KIGLG--TFKPNEVMAAREDAT-   76 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~~~~~~lsv~~~~~v~hy~I~~~~~k-~i~~n--~~L~~~~r~~~~~l~-   76 (128)
                      |||| .|+|++||++|+..++|+||||+|+....|+|++..++.|+||+|.....+ +++..  ..++....  +.+++ 
T Consensus        10 pWy~g~isR~eAe~lL~~~~~G~FLvR~S~~~~~y~Lsv~~~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~e--LV~~y~   87 (106)
T d2cs0a1          10 EWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDA--LVTFHQ   87 (106)
T ss_dssp             SSBCSSCCHHHHHHHHHTSCTTCEEEEECSSSSSEEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHH--HHHHHT
T ss_pred             CCccCCCCHHHHHHHHcCCCCCcEEEEecCCCCCEEEEEEecCCceeEEEEEcCCCCEEEecCCccCCCHHH--HHHHHH
Confidence            7999 899999999998788999999999874449999999999999999887764 43322  22222211  11133 


Q ss_pred             cCCCCCCCcccCCcccc
Q psy9697          77 NHPRDSHPCRTQPRCVI   93 (128)
Q Consensus        77 ~l~~~~~~~rl~nrC~~   93 (128)
                      +.|-...++.|..+|..
T Consensus        88 ~~~~~~~~~~L~~P~~~  104 (106)
T d2cs0a1          88 QKPIEPRRELLTQPCRQ  104 (106)
T ss_dssp             TSCCSSCCCCCCSBCCC
T ss_pred             HCCCCCccCcccCcCCC
Confidence            33445677888888864

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=108.33  Aligned_cols=56  Identities=27%  Similarity=0.413  Sum_probs=51.3

Q ss_pred             CCCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeeccc
Q psy9697           1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDN   56 (128)
Q Consensus         1 ~~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k   56 (128)
                      +|||| +|+|++||++|...+||+||||+|+. +|.|+||+..++.|+||+|...+.+
T Consensus        15 ~~Wy~g~i~R~~Ae~~L~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~   72 (103)
T d2c9wa2          15 TGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK   72 (103)
T ss_dssp             TSCBCTTCCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTE
T ss_pred             CCCcCCCCCHHHHHHHhcCCCCCceEEeccCCCCCCEEEEEEECCEEEEEEEEEcCCe
Confidence            58999 89999999999877899999999987 8999999999999999999877654

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.1e-17  Score=112.09  Aligned_cols=65  Identities=25%  Similarity=0.346  Sum_probs=53.5

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeCCEeeEEeeeeecccccccc---cCCCHHH
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYGGRAYNIFIRKRDDNKIGLG---TFKPNEV   68 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~~~v~hy~I~~~~~k~i~~n---~~L~~~~   68 (128)
                      +||| .|+|++||++|. ++||+||||+|++ +|.|+|||..++.|+||+|.+.+ ++++.+   .++++.+
T Consensus        36 ~wyhG~isR~eAe~lL~-~~dGsFLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~g-~~~~~~~~F~sl~eLV  105 (141)
T d1xa6a2          36 REFHGIISREQADELLG-GVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDG-KHFVGEKRFESIHDLV  105 (141)
T ss_dssp             SSEEEECCHHHHHHHHC-SCTTBEEEEECSSSTTCEEEEEEETTEEEECCCEESS-SEECSSSCCCCSSHHH
T ss_pred             ceeeccCCHHHHHHHHc-CCCCeEEEEecCCCCCCEEEEEEECCEEEEEEEEECC-CEEECCCeECCHHHHH
Confidence            6999 799999999994 4689999999987 89999999999999999998744 443333   5666655

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.44  E-value=8.9e-14  Score=93.47  Aligned_cols=54  Identities=13%  Similarity=0.205  Sum_probs=47.8

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCCC-CCCEEEEEEeC---CEeeEEeeeeecc
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSSS-SEPLTLTLWYG---GRAYNIFIRKRDD   55 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~~-~~~~~lsv~~~---~~v~hy~I~~~~~   55 (128)
                      .||+ .|+|++||++|+...+|+||||+|++ +|.|+||+...   +.|+||.|...+.
T Consensus        10 ~~~~G~isr~~ae~~L~~~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~   68 (131)
T d1uura3          10 GIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDT   68 (131)
T ss_dssp             TSSCBSCCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGS
T ss_pred             CcEEccCCHHHHHHHHhcCCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCC
Confidence            5898 79999999999777899999999987 89999999974   7899999986543

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=3.7e-11  Score=81.38  Aligned_cols=53  Identities=21%  Similarity=0.252  Sum_probs=47.6

Q ss_pred             CCCC-CCCHHHHHHhHhcCCcccEEEeeCC-C-CCCEEEEEEeCCEeeEEeeeeec
Q psy9697           2 AWFH-SVNRERAVQMVAAGGEGCFLVRPSS-S-SEPLTLTLWYGGRAYNIFIRKRD   54 (128)
Q Consensus         2 ~W~~-~i~r~~ae~ll~~~~~G~FlvR~s~-~-~~~~~lsv~~~~~v~hy~I~~~~   54 (128)
                      .||+ .|+|++||++|+...+|+||||+|+ + +|.||++....+.+.|++|....
T Consensus         8 gw~~G~isr~~a~~~L~~~~~GtFLvR~S~~s~~G~~tis~~~~~~~~~~~i~~~~   63 (141)
T d1bg1a3           8 GYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVE   63 (141)
T ss_dssp             SCCCBCCCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCC
T ss_pred             CeEEEeCCHHHHHHHhhCCCCCeEEEEecCCccCCCEEEEEEecCcCCceEEeecC
Confidence            6998 7999999999977789999999997 4 79999999999999999997544

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00019  Score=47.55  Aligned_cols=35  Identities=29%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             CCHHHHHHhHhcCCcccEEEeeCCC--CCCEEEEEEe
Q psy9697           7 VNRERAVQMVAAGGEGCFLVRPSSS--SEPLTLTLWY   41 (128)
Q Consensus         7 i~r~~ae~ll~~~~~G~FlvR~s~~--~~~~~lsv~~   41 (128)
                      |++++|+++|.....|+||+|.|++  +|..+++-..
T Consensus        14 IsK~~a~~~L~~~~~GTFLLRFSdS~~~GgitiawV~   50 (142)
T d1bf5a3          14 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVE   50 (142)
T ss_dssp             CCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECC
T ss_pred             ecHHHHHHHhhCCCCceEEEEeccCccCCceEEEEEE
Confidence            9999999999888889999999986  5999998875