Psyllid ID: psy9793

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEIPPHNTPFPPCPATRCLISD
Secondary Structure (PSIPRED)
ccccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEcc
Coil and Loop (DISEMBL)
mtdkkclehptlkvpYEILNKKFRAVQKTIDREVSYVQSAANELEKTiassekppltEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKehsgnvlsntspdeipphntpfppcpatrclisd
Flexible Loop (DISEMBL)
mtdkkclehptlkvpyeilnKKFRAVQKTIDREVSYVQSAANELektiassekppltEVTRLLGGMFERLQALKRKAgesigeelqvGHVCKRRIEHLKehsgnvlsntspdeipphntpfppcpatrclisd
Low Complexity Region (SEG)
MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEIPPHNTPFPPCPATRCLISD
Disordered region (IsUnstruct)
*********PTLKVPYEILNKKFRAVQKTIDREVSYV*********************VTRLLGGMFERLQALK******IGEELQVGHVCKRRI**************************************
Disordered Region (DISOPRED)
*TDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAA********************LLGGMFERLQAL***************HVCKRRIEHLK******************NTPFPPCPATRCLIS*
Disordered Region (DISEMBL)
MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEIPPHNTPFPPCPATRCLISD
Disordered Region (DISPRO)
*TDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHS*********DEIPPHNTPFPPCPATRCLISD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEIPPHNTPFPPCPATRCLISD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
Q7SXR3	396	Macrophage erythroblast a	yes	N/A	0.736	0.247	0.59	1e-24
Q5F398	396	Macrophage erythroblast a	yes	N/A	0.736	0.247	0.58	3e-24
Q5RKJ1	396	Macrophage erythroblast a	yes	N/A	0.736	0.247	0.58	4e-24
Q4VC33	396	Macrophage erythroblast a	yes	N/A	0.736	0.247	0.58	4e-24
Q5R532	396	Macrophage erythroblast a	yes	N/A	0.736	0.247	0.57	1e-23
Q7L5Y9	396	Macrophage erythroblast a	yes	N/A	0.736	0.247	0.57	1e-23
Q4R9A8	396	Macrophage erythroblast a	N/A	N/A	0.736	0.247	0.57	1e-23
Q3MHJ2	434	Macrophage erythroblast a	yes	N/A	0.736	0.225	0.57	2e-23
Q6GR10	396	Macrophage erythroblast a	N/A	N/A	0.736	0.247	0.57	2e-23
Q1DTI6	402	Protein FYV10 OS=Coccidio	N/A	N/A	0.699	0.231	0.340	2e-08

>sp|Q7SXR3|MAEA_DANRE Macrophage erythroblast attacher OS=Danio rerio GN=maea PE=2 SV=2

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSF--PVVDTVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L ALKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSALKRKAAESIQAEDESAKLCKRRIEHLKEHSSD 112

May play a possible role in erythroblast and macrophages maturation. May associate with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.
Danio rerio (taxid: 7955)

>sp|Q5F398|MAEA_CHICK Macrophage erythroblast attacher OS=Gallus gallus GN=MAEA PE=2 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

May play a possible role in erythroblast and macrophages maturation. May associate with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Gallus gallus (taxid: 9031)

>sp|Q5RKJ1|MAEA_RAT Macrophage erythroblast attacher OS=Rattus norvegicus GN=Maea PE=2 SV=2

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Rattus norvegicus (taxid: 10116)

>sp|Q4VC33|MAEA_MOUSE Macrophage erythroblast attacher OS=Mus musculus GN=Maea PE=1 SV=1

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Mus musculus (taxid: 10090)

>sp|Q5R532|MAEA_PONAB Macrophage erythroblast attacher OS=Pongo abelii GN=MAEA PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Pongo abelii (taxid: 9601)

>sp|Q7L5Y9|MAEA_HUMAN Macrophage erythroblast attacher OS=Homo sapiens GN=MAEA PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Homo sapiens (taxid: 9606)

>sp|Q4R9A8|MAEA_MACFA Macrophage erythroblast attacher OS=Macaca fascicularis GN=MAEA PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Macaca fascicularis (taxid: 9541)

>sp|Q3MHJ2|MAEA_BOVIN Macrophage erythroblast attacher OS=Bos taurus GN=MAEA PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

Plays a role in erythroblast enucleation and in the development of the mature macrophages and mediates the attachment of erythroid cell to mature macrophages. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Bos taurus (taxid: 9913)

>sp|Q6GR10|MAEA_XENLA Macrophage erythroblast attacher OS=Xenopus laevis GN=maea PE=2 SV=2

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 2/100 (2%)

Query: 5   KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
           K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S     +  V  LL 
Sbjct: 15  KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--SAVDSVVSLLD 72

Query: 65  GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
           G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct: 73  GVVEKLSVLKRKAMESIQAEDESAKLCKRRIEHLKEHSSD 112

May play a possible role in erythroblast and macrophages maturation. May associate with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.

Xenopus laevis (taxid: 8355)

>sp|Q1DTI6|FYV10_COCIM Protein FYV10 OS=Coccidioides immitis (strain RS) GN=FYV10 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 7   LEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGM 66
           L+ P L+VP+E+  + F++VQ+ ++RE  YV  A  E      S  K P TE    L  M
Sbjct: 18  LDQPLLRVPHELARRNFKSVQRIVEREKDYVLPALKETANASLSGSKNP-TETIEALDAM 76

Query: 67  FERLQALKRKAGESIGEELQVGHVCKRRIEHLKE 100
             R+Q LKRK      EE ++    ++RI+++++
Sbjct: 77  ITRMQGLKRKMEVLHEEEKKIATQSQKRIQYIQD 110

Involved in the proteasome-dependent degradation of fructose-1,6-bisphosphatase.

Coccidioides immitis (strain RS) (taxid: 246410)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
307171438	391	Macrophage erythroblast attacher [Campon	0.819	0.278	0.617	1e-31
156538040	359	PREDICTED: macrophage erythroblast attac	0.819	0.303	0.620	1e-31
156538038	392	PREDICTED: macrophage erythroblast attac	0.819	0.278	0.620	1e-31
322785354	391	hypothetical protein SINV_11420 [Solenop	0.819	0.278	0.608	2e-31
242017979	397	erythroblast macrophage protein emp, put	0.812	0.272	0.660	2e-31
307200107	393	Macrophage erythroblast attacher [Harpeg	0.819	0.277	0.598	5e-31
380012212	388	PREDICTED: LOW QUALITY PROTEIN: macropha	0.804	0.275	0.631	2e-30
328776327	388	PREDICTED: macrophage erythroblast attac	0.804	0.275	0.631	2e-30
383862199	361	PREDICTED: macrophage erythroblast attac	0.804	0.296	0.631	3e-30
383862197	396	PREDICTED: macrophage erythroblast attac	0.804	0.270	0.631	3e-30

>gi|307171438|gb|EFN63282.1| Macrophage erythroblast attacher [Camponotus floridanus]

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/115 (61%), Positives = 89/115 (77%), Gaps = 6/115 (5%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLT-EV 59
           M+D K LEHPTLKVPYE+LNKKFR+ QKT+DREVS+VQ+ +NELEK++ +      T E+
Sbjct: 1   MSDVKSLEHPTLKVPYELLNKKFRSAQKTLDREVSHVQAVSNELEKSLKTDGSYVATGEI 60

Query: 60  TRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
           ++LLGG+  RLQ LKRKA ESI EELQ G VCKRR++HLKEH     +NTSP  +
Sbjct: 61  SKLLGGVVARLQVLKRKAQESIAEELQAGMVCKRRLDHLKEH-----ANTSPSAV 110

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156538040|ref|XP_001604096.1| PREDICTED: macrophage erythroblast attacher-like isoform 2 [Nasonia vitripennis]

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 87/116 (75%), Gaps = 7/116 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKP--PLTE 58
           M+D K LEHPTLKVPYE+LNKKFR+ QKT+DREVS+VQ+AANE EK     E    P  +
Sbjct: 1   MSDIKSLEHPTLKVPYELLNKKFRSAQKTLDREVSHVQAAANEFEKIGLRGEGKGVPTGD 60

Query: 59  VTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
           +TRLLGG+  +LQ LKRKA ESI EELQ G VCKRR++HLKEH     +NT+P  +
Sbjct: 61  ITRLLGGVVAKLQVLKRKAQESIAEELQAGMVCKRRLDHLKEH-----ANTTPSAV 111

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156538038|ref|XP_001604075.1| PREDICTED: macrophage erythroblast attacher-like isoform 1 [Nasonia vitripennis]

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 87/116 (75%), Gaps = 7/116 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKP--PLTE 58
           M+D K LEHPTLKVPYE+LNKKFR+ QKT+DREVS+VQ+AANE EK     E    P  +
Sbjct: 1   MSDIKSLEHPTLKVPYELLNKKFRSAQKTLDREVSHVQAAANEFEKIGLRGEGKGVPTGD 60

Query: 59  VTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
           +TRLLGG+  +LQ LKRKA ESI EELQ G VCKRR++HLKEH     +NT+P  +
Sbjct: 61  ITRLLGGVVAKLQVLKRKAQESIAEELQAGMVCKRRLDHLKEH-----ANTTPSAV 111

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785354|gb|EFZ12028.1| hypothetical protein SINV_11420 [Solenopsis invicta]

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 89/115 (77%), Gaps = 6/115 (5%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLT-EV 59
           M+D K LEHPTLKVPYE+LNKKFR+ QKT+DREVS+VQ+ +NELEK++ +      T E+
Sbjct: 1   MSDVKSLEHPTLKVPYELLNKKFRSAQKTLDREVSHVQAVSNELEKSLKTDGSYVATGEI 60

Query: 60  TRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
           ++LLGG+  RLQ LKRKA ESI EELQ G VCKRR++HLK+H     +NTSP  +
Sbjct: 61  SKLLGGVVARLQVLKRKAQESIAEELQAGMVCKRRLDHLKDH-----ANTSPSAV 110

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017979|ref|XP_002429461.1| erythroblast macrophage protein emp, putative [Pediculus humanus corporis] gi|212514393|gb|EEB16723.1| erythroblast macrophage protein emp, putative [Pediculus humanus corporis]

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/109 (66%), Positives = 83/109 (76%), Gaps = 1/109 (0%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVT 60
           M D K LEHPTLKVPYE+LNKKFRA QKT+DREV +VQ+AA +LEK +  +E     E++
Sbjct: 1   MADVKSLEHPTLKVPYELLNKKFRAAQKTLDREVFHVQAAALDLEKGL-QNESVGAGEIS 59

Query: 61  RLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNT 109
           RLLGGM ERLQ  KRKA ESI EELQ G+VCKRR+EHLKE  G   S T
Sbjct: 60  RLLGGMVERLQVFKRKAEESISEELQAGYVCKRRLEHLKEAVGETNSAT 108

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200107|gb|EFN80439.1| Macrophage erythroblast attacher [Harpegnathos saltator]

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 87/117 (74%), Gaps = 8/117 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTI---ASSEKPPLT 57
           M+D K LEHPTLKVPYE+LNKKFR+ QKT+DREVS++Q+ +NELEK +    S       
Sbjct: 1   MSDVKSLEHPTLKVPYELLNKKFRSAQKTLDREVSHIQTVSNELEKGLKNDGSGSYVATG 60

Query: 58  EVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
           ++TRLLGG+  +LQ LKRKA ESI EELQ G VCKRR++HLKEH     +NTSP  +
Sbjct: 61  DITRLLGGVVAKLQVLKRKAQESIAEELQAGMVCKRRLDHLKEH-----ANTSPSTV 112

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012212|ref|XP_003690180.1| PREDICTED: LOW QUALITY PROTEIN: macrophage erythroblast attacher-like [Apis florea]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 7/114 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVT 60
           M+D K LE+PTLKVPYE+LNKKFR  QK IDRE SYVQ+AANEL K   +S   P  E++
Sbjct: 1   MSDVKSLEYPTLKVPYELLNKKFRLAQKVIDREASYVQTAANELMKDNKTS--VPAGEMS 58

Query: 61  RLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
            LLGG+ E+LQ LKRKA ESI EELQ G VCKRR+EHLKEH     +NT+P  +
Sbjct: 59  ILLGGVVEKLQTLKRKAQESIAEELQAGMVCKRRLEHLKEH-----ANTAPSVV 107

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776327|ref|XP_395151.3| PREDICTED: macrophage erythroblast attacher-like isoform 1 [Apis mellifera]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 7/114 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVT 60
           M+D K LE+PTLKVPYE+LNKKFR  QK IDRE SYVQ+AANEL K   +S   P  E++
Sbjct: 1   MSDVKSLEYPTLKVPYELLNKKFRLAQKVIDREASYVQTAANELMKDNKTS--VPAGEMS 58

Query: 61  RLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
            LLGG+ E+LQ LKRKA ESI EELQ G VCKRR+EHLKEH     +NT+P  +
Sbjct: 59  ILLGGVVEKLQTLKRKAQESIAEELQAGMVCKRRLEHLKEH-----ANTAPSVV 107

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862199|ref|XP_003706571.1| PREDICTED: macrophage erythroblast attacher-like isoform 2 [Megachile rotundata]

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 7/114 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVT 60
           M+D K LE+PTLKVPYE+LNKKFR  QK IDRE SYVQ+AANEL K   +S   P  E++
Sbjct: 9   MSDVKSLEYPTLKVPYELLNKKFRLAQKVIDREASYVQAAANELMKDNKTS--VPAGEMS 66

Query: 61  RLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
            LLGG+ E+LQ LKRKA ESI EELQ G VCKRR+EHLKEH     +NT+P  +
Sbjct: 67  ILLGGVVEKLQNLKRKAQESIAEELQAGMVCKRRLEHLKEH-----ANTAPSVV 115

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862197|ref|XP_003706570.1| PREDICTED: macrophage erythroblast attacher-like isoform 1 [Megachile rotundata]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 7/114 (6%)

Query: 1   MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVT 60
           M+D K LE+PTLKVPYE+LNKKFR  QK IDRE SYVQ+AANEL K   +S   P  E++
Sbjct: 9   MSDVKSLEYPTLKVPYELLNKKFRLAQKVIDREASYVQAAANELMKDNKTS--VPAGEMS 66

Query: 61  RLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGNVLSNTSPDEI 114
            LLGG+ E+LQ LKRKA ESI EELQ G VCKRR+EHLKEH     +NT+P  +
Sbjct: 67  ILLGGVVEKLQNLKRKAQESIAEELQAGMVCKRRLEHLKEH-----ANTAPSVV 115

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
FB|FBgn0051357	394	CG31357 [Drosophila melanogast	0.744	0.251	0.535	2.6e-24
ZFIN|ZDB-GENE-030131-294	396	maea "macrophage erythroblast	0.736	0.247	0.59	5.3e-24
UNIPROTKB|Q5F398	396	MAEA "Macrophage erythroblast	0.736	0.247	0.58	1.4e-23
MGI|MGI:1891748	396	Maea "macrophage erythroblast	0.736	0.247	0.58	1.4e-23
RGD|1309877	396	Maea "macrophage erythroblast	0.736	0.247	0.58	1.4e-23
UNIPROTKB|Q7L5Y9	396	MAEA "Macrophage erythroblast	0.736	0.247	0.57	3.8e-23
UNIPROTKB|Q3MHJ2	434	MAEA "Macrophage erythroblast	0.736	0.225	0.57	8.1e-23
UNIPROTKB|E7ESC7	434	MAEA "Macrophage erythroblast	0.736	0.225	0.57	8.1e-23
UNIPROTKB|B4DVN3	395	MAEA "cDNA FLJ54556, highly si	0.714	0.240	0.536	9.6e-20
UNIPROTKB|F1MXB7	412	MAEA "Macrophage erythroblast	0.676	0.218	0.554	1.2e-19

FB|FBgn0051357 CG31357 [Drosophila melanogaster (taxid:7227)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/99 (53%), Positives = 74/99 (74%)

Query:     1 MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVT 60
             M++ K LEH TLKVPYE+LNK+FR+ QK IDREV  V + + ++EK + + E P L EVT
Sbjct:     1 MSEIKALEHATLKVPYEMLNKRFRSAQKIIDREVDQVINVSRQVEKALEAEEGPILAEVT 60

Query:    61 RLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLK 99
             +L+  + ++LQ LKRKA ESI +EL V  +CKR+++HLK
Sbjct:    61 KLVDNVAQKLQVLKRKAEESINDELSVTQICKRKLDHLK 99

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-030131-294 maea "macrophage erythroblast attacher" [Danio rerio (taxid:7955)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 59/100 (59%), Positives = 70/100 (70%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSF--PVVDTVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L ALKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSALKRKAAESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0051301 "cell division" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

UNIPROTKB|Q5F398 MAEA "Macrophage erythroblast attacher" [Gallus gallus (taxid:9031)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 58/100 (58%), Positives = 69/100 (69%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--PAVDSVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

MGI|MGI:1891748 Maea "macrophage erythroblast attacher" [Mus musculus (taxid:10090)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 58/100 (58%), Positives = 69/100 (69%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--PAVDSVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0003779 "actin binding" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005819 "spindle" evidence=ISO

GO:0005826 "actomyosin contractile ring" evidence=ISO

GO:0005856 "cytoskeleton" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=ISO

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016363 "nuclear matrix" evidence=ISO

GO:0033033 "negative regulation of myeloid cell apoptotic process" evidence=ISO

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0048821 "erythrocyte development" evidence=IMP

GO:0048822 "enucleate erythrocyte development" evidence=IMP

GO:0051301 "cell division" evidence=IEA

RGD|1309877 Maea "macrophage erythroblast attacher" [Rattus norvegicus (taxid:10116)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 58/100 (58%), Positives = 69/100 (69%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++S   P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSSC--PAVDSVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0003779 "actin binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005819 "spindle" evidence=IEA;ISO

GO:0005826 "actomyosin contractile ring" evidence=IEA;ISO

GO:0005856 "cytoskeleton" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=IEA;ISO

GO:0007010 "cytoskeleton organization" evidence=IEA;ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA;ISO

GO:0015629 "actin cytoskeleton" evidence=ISO

GO:0016363 "nuclear matrix" evidence=IEA;ISO

GO:0033033 "negative regulation of myeloid cell apoptotic process" evidence=IEA;ISO

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0048821 "erythrocyte development" evidence=ISO

GO:0048822 "enucleate erythrocyte development" evidence=IEA;ISO

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|Q7L5Y9 MAEA "Macrophage erythroblast attacher" [Homo sapiens (taxid:9606)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 57/100 (57%), Positives = 68/100 (68%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0007049 "cell cycle" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0048822 "enucleate erythrocyte development" evidence=IEA

GO:0003779 "actin binding" evidence=IDA

GO:0005819 "spindle" evidence=IDA

GO:0005826 "actomyosin contractile ring" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0016363 "nuclear matrix" evidence=IDA

GO:0007346 "regulation of mitotic cell cycle" evidence=NAS

GO:0033033 "negative regulation of myeloid cell apoptotic process" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0007155 "cell adhesion" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|Q3MHJ2 MAEA "Macrophage erythroblast attacher" [Bos taurus (taxid:9913)]

 Score = 267 (99.0 bits), Expect = 8.1e-23, P = 8.1e-23
 Identities = 57/100 (57%), Positives = 68/100 (68%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0016363 "nuclear matrix" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|E7ESC7 MAEA "Macrophage erythroblast attacher" [Homo sapiens (taxid:9606)]

 Score = 267 (99.0 bits), Expect = 8.1e-23, P = 8.1e-23
 Identities = 57/100 (57%), Positives = 68/100 (68%)

Query:     5 KCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLG 64
             K  E+PTLKVPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL 
Sbjct:    15 KVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLD 72

Query:    65 GMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             G+ E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    73 GVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 112

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|B4DVN3 MAEA "cDNA FLJ54556, highly similar to Homo sapiens macrophage erythroblast attacher (MAEA), transcript variant 1, mRNA" [Homo sapiens (taxid:9606)]

 Score = 238 (88.8 bits), Expect = 9.6e-20, P = 9.6e-20
 Identities = 52/97 (53%), Positives = 62/97 (63%)

Query:     8 EHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMF 67
             E     VPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL G+ 
Sbjct:    17 EDTVAPVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLDGVV 74

Query:    68 ERLQALKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             E+L  LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    75 EKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 111

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|F1MXB7 MAEA "Macrophage erythroblast attacher" [Bos taurus (taxid:9913)]

 Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 51/92 (55%), Positives = 62/92 (67%)

Query:    13 KVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQA 72
             +VPYE LNK+FRA QK IDRE S+V     ELEKT++    P +  V  LL G+ E+L  
Sbjct:     1 QVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC--PAVDSVVSLLDGVVEKLSV 58

Query:    73 LKRKAGESIGEELQVGHVCKRRIEHLKEHSGN 104
             LKRKA ESI  E +   +CKRRIEHLKEHS +
Sbjct:    59 LKRKAVESIQAEDESAKLCKRRIEHLKEHSSD 90

GO:0048822 "enucleate erythrocyte development" evidence=IEA

GO:0033033 "negative regulation of myeloid cell apoptotic process" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005826 "actomyosin contractile ring" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3MHJ2	MAEA_BOVIN	No assigned EC number	0.57	0.7368	0.2258	yes	N/A
Q7SXR3	MAEA_DANRE	No assigned EC number	0.59	0.7368	0.2474	yes	N/A
Q5F398	MAEA_CHICK	No assigned EC number	0.58	0.7368	0.2474	yes	N/A
Q7L5Y9	MAEA_HUMAN	No assigned EC number	0.57	0.7368	0.2474	yes	N/A
Q5R532	MAEA_PONAB	No assigned EC number	0.57	0.7368	0.2474	yes	N/A
Q4VC33	MAEA_MOUSE	No assigned EC number	0.58	0.7368	0.2474	yes	N/A
Q5RKJ1	MAEA_RAT	No assigned EC number	0.58	0.7368	0.2474	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG0396|consensus	389		99.87
PRK04406	75	hypothetical protein; Provisional	93.21
PRK04325	74	hypothetical protein; Provisional	92.33
PRK02793	72	phi X174 lysis protein; Provisional	92.2
PRK02119	73	hypothetical protein; Provisional	92.17
PF04102	69	SlyX: SlyX; InterPro: IPR007236 The SlyX protein h	91.42
PF11221	144	Med21: Subunit 21 of Mediator complex; InterPro: I	90.67
PRK00736	68	hypothetical protein; Provisional	90.59
PRK00295	68	hypothetical protein; Provisional	90.42
PF14712	92	Snapin_Pallidin: Snapin/Pallidin	90.32
PF04136	157	Sec34: Sec34-like family ; InterPro: IPR007265 Sec	87.65
PRK00846	77	hypothetical protein; Provisional	81.19

>KOG0396|consensus

Probab=99.87  E-value=6.6e-22  Score=167.01  Aligned_cols=102  Identities=36%  Similarity=0.429  Sum_probs=94.8

Q ss_pred             CccccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHHHHHHhh
Q psy9793           1 MTDKKCLEHPTLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIASS-EKPPLTEVTRLLGGMFERLQALKRKAGE   79 (133)
Q Consensus         1 ~~~il~LE~p~lkVPyElLrKnFR~~QK~IEkE~~~v~~~~~eL~k~l~~~-~~~~~~~a~~~Ld~lI~rl~~LKRKL~~   79 (133)
                      |++++.|||++||||||+|+|.||+.||.|+||++.|...+++|++.+.++ ....+ .+++++|.||.|++.+|||+++
T Consensus         1 ~~~~l~l~y~l~ripye~l~kr~r~~qk~i~re~~~v~~~~~~l~~~~~sn~~~~~d-~~~~~id~Li~kv~~~krk~e~   79 (389)
T KOG0396|consen    1 MTFHLKLEYQLFRIPYELLNKRIRHNQKVIDRETSHVLMVVAELQETLISNIVPHLD-STVSLIDRLIRKVQCLKRKLEE   79 (389)
T ss_pred             CcchhhhhchhhcCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcccChhHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999987654 34467 9999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh-hhc
Q psy9793          80 SIGEELQVGHVCKRRIEHLKE-HSG  103 (133)
Q Consensus        80 ~~~eE~~~~~r~k~Rl~hL~e-l~~  103 (133)
                      .++.|.+++++|++||+|+++ +..
T Consensus        80 ~iq~e~~~~~~iksRid~m~e~~~~  104 (389)
T KOG0396|consen   80 YIQSEEEQLKRIKSRIDFMHEEISS  104 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999994 443

>PRK04406 hypothetical protein; Provisional

Probab=93.21  E-value=1.8  Score=29.31  Aligned_cols=32  Identities=13%  Similarity=0.267  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHh----hhhcCCCCCCCCCCCCCC
Q psy9793          86 QVGHVCKRRIEHLK----EHSGNVLSNTSPDEIPPH  117 (133)
Q Consensus        86 ~~~~r~k~Rl~hL~----el~~~~~~~~~~~~~~~~  117 (133)
                      ..++++++++.+|.    +.........+.++.|||
T Consensus        39 ~~I~~L~~ql~~L~~rl~~~~~~~~~~~~~e~pPPH   74 (75)
T PRK04406         39 LLITKMQDQMKYVVGKVKNMDSSNLADPAEETPPPH   74 (75)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccC
Confidence            33444444444443    233223344567889999

>PRK04325 hypothetical protein; Provisional

Probab=92.33  E-value=1.6  Score=29.30  Aligned_cols=9  Identities=67%  Similarity=1.077  Sum_probs=7.0

Q ss_pred             CCCCCCCCC
Q psy9793         110 SPDEIPPHN  118 (133)
Q Consensus       110 ~~~~~~~~~  118 (133)
                      ..++.|||-
T Consensus        66 ~~~e~PPHY   74 (74)
T PRK04325         66 LRDEIPPHY   74 (74)
T ss_pred             CCcCCCCCC
Confidence            468999993

>PRK02793 phi X174 lysis protein; Provisional

Probab=92.20  E-value=1.8  Score=28.90  Aligned_cols=31  Identities=13%  Similarity=0.246  Sum_probs=15.5

Q ss_pred             HHHHHHHHHHHHh----hhhcCCCCCCCCCCCCCC
Q psy9793          87 VGHVCKRRIEHLK----EHSGNVLSNTSPDEIPPH  117 (133)
Q Consensus        87 ~~~r~k~Rl~hL~----el~~~~~~~~~~~~~~~~  117 (133)
                      .++++.+.+.+|.    ++.+......+.++.|||
T Consensus        37 ~I~~L~~~l~~L~~rl~~~~~~~~~~~~~e~~PPH   71 (72)
T PRK02793         37 EMAKLRDHLRLLTEKLKASQPSNIASQAEETPPPH   71 (72)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCcCC
Confidence            3444444444443    233322234456789999

>PRK02119 hypothetical protein; Provisional

Probab=92.17  E-value=2.5  Score=28.39  Aligned_cols=11  Identities=27%  Similarity=0.721  Sum_probs=7.8

Q ss_pred             CCCCCCCCCCC
Q psy9793         107 SNTSPDEIPPH  117 (133)
Q Consensus       107 ~~~~~~~~~~~  117 (133)
                      .....+++|||
T Consensus        62 ~~~~~e~~PPH   72 (73)
T PRK02119         62 ASQAEETPPPH   72 (73)
T ss_pred             CCCCCCCCcCC
Confidence            34556779999

>PF04102 SlyX: SlyX; InterPro: IPR007236 The SlyX protein has no known function

Probab=91.42  E-value=1.7  Score=28.66  Aligned_cols=40  Identities=20%  Similarity=0.355  Sum_probs=12.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhh----h-cCCCCCCCCCCCCCC
Q psy9793          78 GESIGEELQVGHVCKRRIEHLKEH----S-GNVLSNTSPDEIPPH  117 (133)
Q Consensus        78 ~~~~~eE~~~~~r~k~Rl~hL~el----~-~~~~~~~~~~~~~~~  117 (133)
                      ++.+-+....+++++.++.+|.+-    . .........++.|||
T Consensus        24 n~~v~~Qq~~I~~L~~~l~~L~~rl~~~~~~~~~~~~~~~~~PPH   68 (69)
T PF04102_consen   24 NDVVTEQQRQIDRLQRQLRLLRERLRELEDPSGSADPPEEEPPPH   68 (69)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCcCC
Confidence            334444445566666666666542    2 112355678889998

It is short, less than 80 amino acids, and its gene is found close to the slyD gene. The SlyX protein has a conserved PPH(Y/W) motif at its C terminus. The protein may be a coiled-coil structure.; PDB: 3EFG_A.

>PF11221 Med21: Subunit 21 of Mediator complex; InterPro: IPR021384 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes

Probab=90.67  E-value=5.6  Score=29.61  Aligned_cols=79  Identities=11%  Similarity=0.119  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Q psy9793          20 NKKFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLK   99 (133)
Q Consensus        20 rKnFR~~QK~IEkE~~~v~~~~~eL~k~l~~~~~~~~~~a~~~Ld~lI~rl~~LKRKL~~~~~eE~~~~~r~k~Rl~hL~   99 (133)
                      .-.|+...+.+=+.+..-...+..|..++-+-+.+.+ +-.+.|..|-..++...+.+.+.+.+=...+.+++..|..+.
T Consensus        64 ~~~~~~~~~elA~dIi~kakqIe~LIdsLPg~~~see-~Q~~~i~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~i~~ia  142 (144)
T PF11221_consen   64 PEEFEENIKELATDIIRKAKQIEYLIDSLPGIEVSEE-EQLKRIKELEEENEEAEEELQEAVKEAEELLKQVQELIREIA  142 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSS-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3578888888888888888888888887765445666 888999999999999999999999999999999999887664

Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med21 has been known as Srb7 in yeasts, hSrb7 in humans and Trap 19 in Drosophila. The heterodimer of the two subunits Med7 and Med21 appears to act as a hinge between the middle and the tail regions of Mediator []. ; PDB: 1YKE_B 1YKH_B.

>PRK00736 hypothetical protein; Provisional

Probab=90.59  E-value=2.8  Score=27.67  Aligned_cols=9  Identities=44%  Similarity=0.840  Sum_probs=6.8

Q ss_pred             CCCCCCCCC
Q psy9793         109 TSPDEIPPH  117 (133)
Q Consensus       109 ~~~~~~~~~  117 (133)
                      .+.++.|||
T Consensus        59 ~~~~~~PPH   67 (68)
T PRK00736         59 DVPVTKPPH   67 (68)
T ss_pred             CCCCCCcCC
Confidence            446888998

>PRK00295 hypothetical protein; Provisional

Probab=90.42  E-value=3.7  Score=27.14  Aligned_cols=11  Identities=27%  Similarity=0.610  Sum_probs=8.0

Q ss_pred             CCCCCCCCCCC
Q psy9793         107 SNTSPDEIPPH  117 (133)
Q Consensus       107 ~~~~~~~~~~~  117 (133)
                      .....++.|||
T Consensus        57 ~~~~~e~~PPH   67 (68)
T PRK00295         57 GSFEEEAPPPH   67 (68)
T ss_pred             CCCCCCCCcCC
Confidence            44556789999

>PF14712 Snapin_Pallidin: Snapin/Pallidin

Probab=90.32  E-value=4.1  Score=27.55  Aligned_cols=33  Identities=15%  Similarity=0.261  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Q psy9793          64 GGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKE  100 (133)
Q Consensus        64 d~lI~rl~~LKRKL~~~~~eE~~~~~r~k~Rl~hL~e  100 (133)
                      +..+.|+..+|+++....+.    ++.++.|+..|++
T Consensus        60 ~~y~~KL~~ikkrm~~l~~~----l~~lk~R~~~L~q   92 (92)
T PF14712_consen   60 DPYVKKLVNIKKRMSNLHER----LQKLKKRADKLQQ   92 (92)
T ss_pred             hHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhcC
Confidence            44889999999999888764    8889999988864

>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1

Probab=87.65  E-value=8  Score=29.30  Aligned_cols=49  Identities=10%  Similarity=0.179  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH---HHHHHHHHHHHhhhhcCCC
Q psy9793          58 EVTRLLGGMFERLQALKRKAGESIGEELQV---GHVCKRRIEHLKEHSGNVL  106 (133)
Q Consensus        58 ~a~~~Ld~lI~rl~~LKRKL~~~~~eE~~~---~~r~k~Rl~hL~el~~~~~  106 (133)
                      +.......+-++-..|...-+++..++..+   .+.|.+||.||.+++....
T Consensus        32 ~l~~~~~~Vs~kT~~l~~~ce~Ll~eq~~L~~~ae~I~~~L~yF~~Ld~itr   83 (157)
T PF04136_consen   32 ELQEQYNSVSEKTNSLHEACEQLLEEQTRLEELAEEISEKLQYFEELDPITR   83 (157)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhHHHHHH
Confidence            456667777788888888888888887554   8899999999999976433

This complex is thought to be important for tethering vesicles to the Golgi [].; GO: 0006886 intracellular protein transport, 0005801 cis-Golgi network, 0016020 membrane

>PRK00846 hypothetical protein; Provisional

Probab=81.19  E-value=15  Score=25.13  Aligned_cols=32  Identities=22%  Similarity=0.405  Sum_probs=14.1

Q ss_pred             HHHHHHHHHHHHHh----hhhcCCCCCCCCCCCCCC
Q psy9793          86 QVGHVCKRRIEHLK----EHSGNVLSNTSPDEIPPH  117 (133)
Q Consensus        86 ~~~~r~k~Rl~hL~----el~~~~~~~~~~~~~~~~  117 (133)
                      ..+++++..+.+|.    +..+...+..+.+.-|||
T Consensus        41 ~~I~~L~~ql~~L~~rL~~~~~s~~~~~~dE~PPPH   76 (77)
T PRK00846         41 LTGARNAELIRHLLEDLGKVRSTLFADPADEPPPPH   76 (77)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCcCC
Confidence            33444444444333    333333333333447777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	133
3swy_A	46	Cyclic nucleotide-gated cation channel alpha-3; co	87.66
3swf_A	74	CGMP-gated cation channel alpha-1; coiled-coil, as	84.11
3efg_A	78	Protein SLYX homolog; xanthomonas campestris PV. c	80.99

>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}

Probab=87.66  E-value=3.1  Score=24.98  Aligned_cols=43  Identities=14%  Similarity=0.178  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Q psy9793          58 EVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKE  100 (133)
Q Consensus        58 ~a~~~Ld~lI~rl~~LKRKL~~~~~eE~~~~~r~k~Rl~hL~e  100 (133)
                      +.-++++.|-..|+.|+-|+..+..+-......++.||..|+.
T Consensus         2 dlEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~   44 (46)
T 3swy_A            2 ALEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLES   44 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3556788888889999999999999999999999999998864

>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}

Probab=84.11  E-value=3.8  Score=27.00  Aligned_cols=44  Identities=11%  Similarity=0.173  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh
Q psy9793          58 EVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHLKEH  101 (133)
Q Consensus        58 ~a~~~Ld~lI~rl~~LKRKL~~~~~eE~~~~~r~k~Rl~hL~el  101 (133)
                      ++-.+++.|-..|+.|+-|+..+..+-.....+++.||..|...
T Consensus         4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~   47 (74)
T 3swf_A            4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKF   47 (74)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45577888888899999999999999999999999999998864

>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}

Probab=80.99  E-value=6.9  Score=25.62  Aligned_cols=59  Identities=24%  Similarity=0.291  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHhhh-hcCCCC--CCCCCC-CCCC
Q psy9793          59 VTRLLGGMFERLQALKR---KAGESIGEELQVGHVCKRRIEHLKEH-SGNVLS--NTSPDE-IPPH  117 (133)
Q Consensus        59 a~~~Ld~lI~rl~~LKR---KL~~~~~eE~~~~~r~k~Rl~hL~el-~~~~~~--~~~~~~-~~~~  117 (133)
                      .-..|..|-.|+--..+   .|++.+-+....+++++.++.+|.+- .+..++  ....+| .|||
T Consensus        12 le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~~~~~~~~~e~~PPH   77 (78)
T 3efg_A           12 LEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVRSTLFADAADEPPPPH   77 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccC
Confidence            33344444444433333   34444556667788888888888653 222222  122345 7888

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	133
d1lrza1	65	Methicillin resistance protein FemA probable tRNA-	90.93
d1nkpa_	88	Myc proto-oncogene protein {Human (Homo sapiens) [	90.84
d1ykhb1	129	RNA polymerase II holoenzyme component SRB7 (MED21	87.68
d1s35a2	105	Spectrin beta chain {Human (Homo sapiens) [TaxId:	85.12

>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: tRNA-binding arm
family: Methicillin resistance protein FemA probable tRNA-binding arm
domain: Methicillin resistance protein FemA probable tRNA-binding arm
species: Staphylococcus aureus [TaxId: 1280]

Probab=90.93  E-value=0.98  Score=27.43  Aligned_cols=58  Identities=17%  Similarity=0.173  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy9793          23 FRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIG   82 (133)
Q Consensus        23 FR~~QK~IEkE~~~v~~~~~eL~k~l~~~~~~~~~~a~~~Ld~lI~rl~~LKRKL~~~~~   82 (133)
                      |+..-..+..+...+...++.+.+.+.. ++... -+...+..+.++++.+.+|+.+...
T Consensus         1 F~eYl~~L~~~~~~L~~~i~k~~~~lek-nP~sk-K~~nk~~el~~Q~~s~~~ki~Ea~~   58 (65)
T d1lrza1           1 FDEYIKELNEERDILNKDLNKALKDIEK-RPENK-KAHNKRDNLQQQLDANEQKIEEGKR   58 (65)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCcH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666777888888888888888888775 36666 6889999999999999999887654

>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myc proto-oncogene protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.84  E-value=1.1  Score=27.86  Aligned_cols=75  Identities=15%  Similarity=0.151  Sum_probs=43.7

Q ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHhcCC----CCCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9793          24 RAVQKTIDRE-VSYVQSAANELEKTIASS----EKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIEHL   98 (133)
Q Consensus        24 R~~QK~IEkE-~~~v~~~~~eL~k~l~~~----~~~~~~~a~~~Ld~lI~rl~~LKRKL~~~~~eE~~~~~r~k~Rl~hL   98 (133)
                      |..+..+||. -..+.+.+.+|.+.+-+.    ..+.. +++..--..|..|+....++..-...-....+.+..|+.+|
T Consensus         7 R~~Hn~~Er~RR~~in~~f~~Lr~llP~~~~~~k~sK~-~iL~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L   85 (88)
T d1nkpa_           7 RRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKV-VILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL   85 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCccCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5678889987 788999999998876321    23333 44444444444444433344333333344455667777666


Q ss_pred             h
Q psy9793          99 K   99 (133)
Q Consensus        99 ~   99 (133)
                      .
T Consensus        86 ~   86 (88)
T d1nkpa_          86 G   86 (88)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: Mediator hinge subcomplex-like
superfamily: Mediator hinge subcomplex-like
family: CSE2-like
domain: RNA polymerase II holoenzyme component SRB7 (MED21)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.68  E-value=2.8  Score=28.24  Aligned_cols=74  Identities=14%  Similarity=0.184  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy9793          22 KFRAVQKTIDREVSYVQSAANELEKTIASSEKPPLTEVTRLLGGMFERLQALKRKAGESIGEELQVGHVCKRRIE   96 (133)
Q Consensus        22 nFR~~QK~IEkE~~~v~~~~~eL~k~l~~~~~~~~~~a~~~Ld~lI~rl~~LKRKL~~~~~eE~~~~~r~k~Rl~   96 (133)
                      .|...++.+=+.+..-...+..|..++-+-+.+.+ ...+.|..|-+.++...+++.+.+.+-...+.++...|.
T Consensus        53 ~f~~~~~elA~dii~kakqId~LI~sLP~~~~see-~Q~~~i~~Le~E~~~~~~el~~~v~e~e~ll~~i~~~i~  126 (129)
T d1ykhb1          53 EFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAE-EQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIE  126 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57777777777777777778888777765456667 888999999999999999999999888888888887765

>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.12  E-value=2.7  Score=25.66  Aligned_cols=54  Identities=9%  Similarity=-0.028  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----HhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy9793          27 QKTIDREVSYVQSAANELEK----TIASSEKPPLTEVTRLLGGMFERLQALKRKAGESI   81 (133)
Q Consensus        27 QK~IEkE~~~v~~~~~eL~k----~l~~~~~~~~~~a~~~Ld~lI~rl~~LKRKL~~~~   81 (133)
                      ++.+++++......+..+..    .+..+....+ .+...++.|.++.+.|+.++++..
T Consensus        42 h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~-~I~~~~~~l~~rw~~l~~~~~~r~   99 (105)
T d1s35a2          42 FEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD-KIKEKVQLIEDRHRKNNEKAQEAS   99 (105)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCcch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555555555555555533    3444455666 788888888888888887776543