Psyllid ID: psy9950
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | 2.2.26 [Sep-21-2011] | |||||||
| Q96PX9 | 1271 | Pleckstrin homology domai | yes | N/A | 0.501 | 0.288 | 0.525 | 1e-114 | |
| Q58EX7 | 1191 | Puratrophin-1 OS=Homo sap | no | N/A | 0.484 | 0.298 | 0.541 | 1e-112 | |
| Q8TER5 | 1519 | Rho guanine nucleotide ex | no | N/A | 0.453 | 0.218 | 0.388 | 2e-65 | |
| Q3UPH7 | 1517 | Rho guanine nucleotide ex | no | N/A | 0.453 | 0.218 | 0.368 | 1e-62 | |
| Q9CWR0 | 618 | Rho guanine nucleotide ex | no | N/A | 0.404 | 0.478 | 0.338 | 2e-51 | |
| O75962 | 3097 | Triple functional domain | no | N/A | 0.403 | 0.095 | 0.337 | 2e-50 | |
| Q0KL02 | 3102 | Triple functional domain | no | N/A | 0.403 | 0.095 | 0.334 | 3e-49 | |
| Q86VW2 | 580 | Rho guanine nucleotide ex | no | N/A | 0.416 | 0.525 | 0.322 | 4e-49 | |
| Q1LUA6 | 3028 | Triple functional domain | no | N/A | 0.397 | 0.096 | 0.335 | 1e-48 | |
| P97924 | 2959 | Kalirin OS=Rattus norvegi | no | N/A | 0.405 | 0.100 | 0.330 | 2e-48 |
| >sp|Q96PX9|PKH4B_HUMAN Pleckstrin homology domain-containing family G member 4B OS=Homo sapiens GN=PLEKHG4B PE=2 SV=4 | Back alignment and function desciption |
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Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/386 (52%), Positives = 280/386 (72%), Gaps = 19/386 (4%)
Query: 300 LLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQH 359
L IM EMI TER+Y++ L YVI NY PE+ R D+PQ LRG+ +VIFGN+EK+++FH QH
Sbjct: 806 LRHIMAEMIATEREYIRCLGYVIDNYFPEMERMDLPQGLRGKHHVIFGNLEKLHDFHQQH 865
Query: 360 FLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELAD 419
FL ELE+C + PL+VG+ FL HE +F +Y +Y+KNKP+SDAL++ +G++FFK KQ EL D
Sbjct: 866 FLRELERCQHCPLAVGRSFLRHEEQFGMYVIYSKNKPQSDALLSSHGNAFFKDKQRELGD 925
Query: 420 RMDLASYLLKPVQRMGKYALLLQQLMK------ASRQDVKDIKEAESMVRFQLRHGNDLL 473
+MDLASYLL+PVQR+ KYALLLQ L+K A Q++ +++ AE +V FQLRHGNDLL
Sbjct: 926 KMDLASYLLRPVQRVAKYALLLQDLLKEASCGLAQGQELGELRAAEVVVCFQLRHGNDLL 985
Query: 474 AMDSLRECDVNLKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLD 533
AMD++R CDVNLKEQG+L ++EFIV G+ KK LRHVFLFE+LILFSK ++ + D
Sbjct: 986 AMDAIRGCDVNLKEQGQLRCRDEFIVCCGR-KKYLRHVFLFEDLILFSKTQKV--EGSHD 1042
Query: 534 LYIYKHSMKMSDIGITAQIGDSSTKFEIWF-RKRKPNETFTLQSMSEDIKQAWTDELSNL 592
+Y+YK S K ++IG+T +GDS +FEIWF R+RK +T+ LQ+ S ++K AWTD + +
Sbjct: 1043 VYLYKQSFKTAEIGMTENVGDSGLRFEIWFRRRRKSQDTYILQASSAEVKSAWTDVIGRI 1102
Query: 593 LWKQALRNRAMRLQEMSSMGIGNKPCLDIR-----PSADQISDRSISITQLNKTTPK--F 645
LW+QAL++R +R+QEM+SMGIGN+P +D++ P ISDR+ ++ P
Sbjct: 1103 LWRQALKSRELRIQEMASMGIGNQPFMDVKPRDRTPDCAVISDRAPKCAVMSDRVPDSIV 1162
Query: 646 RNSIAVMPGSGGL--SDVGGPRTRPH 669
+ + + M GS + SD P RPH
Sbjct: 1163 KGTESQMRGSTAVSSSDHAAPFKRPH 1188
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Homo sapiens (taxid: 9606) |
| >sp|Q58EX7|PKHG4_HUMAN Puratrophin-1 OS=Homo sapiens GN=PLEKHG4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8TER5|ARH40_HUMAN Rho guanine nucleotide exchange factor 40 OS=Homo sapiens GN=ARHGEF40 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q3UPH7|ARH40_MOUSE Rho guanine nucleotide exchange factor 40 OS=Mus musculus GN=Arhgef40 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9CWR0|ARHGP_MOUSE Rho guanine nucleotide exchange factor 25 OS=Mus musculus GN=Arhgef25 PE=1 SV=1 | Back alignment and function description |
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| >sp|O75962|TRIO_HUMAN Triple functional domain protein OS=Homo sapiens GN=TRIO PE=1 SV=2 | Back alignment and function description |
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| >sp|Q0KL02|TRIO_MOUSE Triple functional domain protein OS=Mus musculus GN=Trio PE=1 SV=3 | Back alignment and function description |
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| >sp|Q86VW2|ARHGP_HUMAN Rho guanine nucleotide exchange factor 25 OS=Homo sapiens GN=ARHGEF25 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q1LUA6|TRIO_DANRE Triple functional domain protein OS=Danio rerio GN=trio PE=3 SV=1 | Back alignment and function description |
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| >sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | ||||||
| 328720142 | 1192 | PREDICTED: hypothetical protein LOC10015 | 0.938 | 0.576 | 0.651 | 0.0 | |
| 328720144 | 1551 | PREDICTED: hypothetical protein LOC10015 | 0.938 | 0.442 | 0.651 | 0.0 | |
| 328790984 | 1804 | PREDICTED: hypothetical protein LOC41071 | 0.810 | 0.328 | 0.568 | 0.0 | |
| 380019586 | 1075 | PREDICTED: LOW QUALITY PROTEIN: puratrop | 0.882 | 0.600 | 0.546 | 0.0 | |
| 340716603 | 743 | PREDICTED: puratrophin-1-like [Bombus te | 0.885 | 0.872 | 0.555 | 0.0 | |
| 307184691 | 774 | Puratrophin-1 [Camponotus floridanus] | 0.860 | 0.813 | 0.568 | 0.0 | |
| 345484600 | 1678 | PREDICTED: puratrophin-1-like [Nasonia v | 0.897 | 0.391 | 0.530 | 0.0 | |
| 270004647 | 1638 | hypothetical protein TcasGA2_TC004018 [T | 0.830 | 0.371 | 0.5 | 0.0 | |
| 189236017 | 1358 | PREDICTED: similar to CG33275 CG33275-PA | 0.830 | 0.447 | 0.5 | 0.0 | |
| 332019742 | 657 | Puratrophin-1 [Acromyrmex echinatior] | 0.744 | 0.829 | 0.571 | 1e-177 |
| >gi|328720142|ref|XP_003246962.1| PREDICTED: hypothetical protein LOC100159154 isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/741 (65%), Positives = 559/741 (75%), Gaps = 54/741 (7%)
Query: 1 RNLDKAGDLLEECGGSSAPGVTTGGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCY 60
+NLDKAGDLLEE G S G+ LKDLA++L+QHLRGFS+RLE+TRERLEDTSRC+
Sbjct: 441 QNLDKAGDLLEEAGQCS------NGTSLKDLAKSLKQHLRGFSDRLEETRERLEDTSRCF 494
Query: 61 YLLDRAYEWALEAMKYISRVKPEDQTSIEPTVKQLRQYLMAHPPLASEHFTEMIQLAKKL 120
YLLD+AY+WALE MKYIS + VK+LR+YLMAHP ++HF+EM+ LA KL
Sbjct: 495 YLLDKAYDWALECMKYIS------EKHDTRNVKELRRYLMAHPSPTAQHFSEMMMLANKL 548
Query: 121 NNDKLIEQCKVAQCRCEETLEQIRSYLGADSTHQWNTSTPLPSRRKSLAPSPSPHHTPSH 180
NNDKLI+QCKVA RCEET +Q++ LG ++ + TSTPLP RR S +P H H
Sbjct: 549 NNDKLIKQCKVAMVRCEETNDQLKHLLGPET---FPTSTPLPPRRTS-----APEH---H 597
Query: 181 ACPCWDPGDNSTLPSPSIPEE-CYCRTGNHSNHPLQRSCTWQYPTENYDEEEDKVSSVDN 239
A DN EE YC T + + S W Y DEE+++ S +
Sbjct: 598 ATNGNTTADNHHCGWVGATEENFYCETDRLALSHIP-SANWTYN----DEEDEEKLSCSH 652
Query: 240 TTEGSDTGKSGEECCEEPSEN---SLSKPMPPVSVNSHLHY-SQLSLDLDSASCGVQTLK 295
TTEGSD KS EE + + S ++ +PP+SVNSHLHY S L L++D CG QTLK
Sbjct: 653 TTEGSDENKSNEESDDTNCADLGCSKNQSLPPLSVNSHLHYMSNLQLNMD---CGTQTLK 709
Query: 296 TQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEF 355
QK + IMREMIQTERDYVKSLEYVI NY+P L EDIPQALRGQRNVIFGNIEKIYEF
Sbjct: 710 LQKTVKLIMREMIQTERDYVKSLEYVIENYVPMLLNEDIPQALRGQRNVIFGNIEKIYEF 769
Query: 356 HSQHFLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQL 415
HSQHFL ELE+ N PL VG+ FL HE KFYLYALYNKNKP SD+LM+EYGS+FFKAKQ+
Sbjct: 770 HSQHFLKELERHENCPLQVGESFLKHEKKFYLYALYNKNKPNSDSLMSEYGSAFFKAKQI 829
Query: 416 ELADRMDLASYLLKPVQRMGKYALLLQQLMKASRQDVKDIKEAESMVRFQLRHGNDLLAM 475
EL DRMDLASYLLKPVQRMGKYALLLQQLMK ++ D + +++AESMVRFQLRHGNDLLAM
Sbjct: 830 ELRDRMDLASYLLKPVQRMGKYALLLQQLMKMAKGDTEHLRQAESMVRFQLRHGNDLLAM 889
Query: 476 DSLRECDVNLKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLY 535
DSLRECDVNLKEQGRLLRQNEF+V QGKGKKCLR VFLFEELILFSKARRFPD+ NLDLY
Sbjct: 890 DSLRECDVNLKEQGRLLRQNEFLVWQGKGKKCLRQVFLFEELILFSKARRFPDQTNLDLY 949
Query: 536 IYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595
+YK+S+K SDIG TA++GDS+TKFEIWFRKRKP +T+TL SMSEDIKQ+WTDELSNLLWK
Sbjct: 950 VYKNSIKTSDIGFTAKVGDSNTKFEIWFRKRKPGDTYTLVSMSEDIKQSWTDELSNLLWK 1009
Query: 596 QALRNRAMRLQEMSSMGIGNKPCLDIRPSADQISDRSISITQLNKTTPKFRNSIAVMPGS 655
QALRNR +RL EMSSMGIGNKPCLDIRPSADQI+DRSI+ QL+KT P+FRNSI +P
Sbjct: 1010 QALRNREVRLAEMSSMGIGNKPCLDIRPSADQINDRSITFAQLSKTAPRFRNSIVALP-- 1067
Query: 656 GGLSDVGGPRTRPHSIISVSSSSGGSSSGSMNGG----------GPRQTSQCS--SAESG 703
SD+ RPHSIISVSSSS GSS+ S G RQTSQCS S ESG
Sbjct: 1068 ---SDLESIAKRPHSIISVSSSSAGSSNSSSGSSSSGASCRSSEGARQTSQCSSQSTESG 1124
Query: 704 IVTDWHTTRSNS-SVTSDSTS 723
IV DW++ S+S SV SD+ S
Sbjct: 1125 IVADWYSRNSHSGSVASDTLS 1145
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Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328720144|ref|XP_003246963.1| PREDICTED: hypothetical protein LOC100159154 isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|328790984|ref|XP_394195.3| PREDICTED: hypothetical protein LOC410718 isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|380019586|ref|XP_003693685.1| PREDICTED: LOW QUALITY PROTEIN: puratrophin-1-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|340716603|ref|XP_003396786.1| PREDICTED: puratrophin-1-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|307184691|gb|EFN71020.1| Puratrophin-1 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|345484600|ref|XP_001603781.2| PREDICTED: puratrophin-1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|270004647|gb|EFA01095.1| hypothetical protein TcasGA2_TC004018 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|189236017|ref|XP_968125.2| PREDICTED: similar to CG33275 CG33275-PA [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|332019742|gb|EGI60209.1| Puratrophin-1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | ||||||
| FB|FBgn0035802 | 1904 | CG33275 [Drosophila melanogast | 0.573 | 0.220 | 0.662 | 5.9e-148 | |
| UNIPROTKB|Q58EX7 | 1191 | PLEKHG4 "Puratrophin-1" [Homo | 0.484 | 0.298 | 0.541 | 1.3e-111 | |
| UNIPROTKB|E2RF15 | 1195 | PLEKHG4 "Uncharacterized prote | 0.484 | 0.297 | 0.541 | 2.7e-111 | |
| RGD|1310790 | 1186 | Plekhg4 "pleckstrin homology d | 0.491 | 0.303 | 0.534 | 5.5e-111 | |
| UNIPROTKB|F1RFX5 | 1195 | PLEKHG4 "Uncharacterized prote | 0.484 | 0.297 | 0.541 | 2.4e-108 | |
| UNIPROTKB|E1BEX3 | 1199 | PLEKHG4 "Uncharacterized prote | 0.505 | 0.308 | 0.522 | 3.1e-108 | |
| UNIPROTKB|F1Q178 | 1812 | PLEKHG4B "Uncharacterized prot | 0.487 | 0.197 | 0.557 | 6e-105 | |
| UNIPROTKB|Q96PX9 | 1271 | PLEKHG4B "Pleckstrin homology | 0.542 | 0.312 | 0.505 | 4.7e-103 | |
| ZFIN|ZDB-GENE-030131-9944 | 1990 | quo "quattro" [Danio rerio (ta | 0.468 | 0.172 | 0.536 | 8.5e-99 | |
| ZFIN|ZDB-GENE-090313-319 | 1588 | si:dkey-65j6.2 "si:dkey-65j6.2 | 0.431 | 0.198 | 0.538 | 1.4e-89 |
| FB|FBgn0035802 CG33275 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 1424 (506.3 bits), Expect = 5.9e-148, Sum P(2) = 5.9e-148
Identities = 292/441 (66%), Positives = 341/441 (77%)
Query: 233 KVSSVDNTTEGSDTGKSGEECCEEPSENSLSKPMPPVSVNSHL--HYSQLSLD-LDSASC 289
++ S + E S +EC + PS+ + P+ N+HL H S L L L+ SC
Sbjct: 1282 RICSCQSLNEKSHDELLEDECFDRPSKRYMDIMHSPMEANAHLQCHGSSLELPKLEELSC 1341
Query: 290 GVQTLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNI 349
K QK LL IMREMI TERDYV+SL YVI NYI EL REDIPQ LRGQRNVIFGNI
Sbjct: 1342 --LDPKIQKTLLLIMREMIGTERDYVRSLYYVIENYIDELLREDIPQPLRGQRNVIFGNI 1399
Query: 350 EKIYEFHSQHFLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSF 409
EKI+EFH+ HFLGELE+ PL VG FL E+KFYLYALYNKNKPKSD L++EYGSSF
Sbjct: 1400 EKIFEFHNSHFLGELERYERNPLKVGAAFLEMESKFYLYALYNKNKPKSDTLLSEYGSSF 1459
Query: 410 FKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASR-----------QDVKDIKEA 458
FK KQ++L D++DLASYLLKPVQRMGKYALLLQQL+KA + DV++++ A
Sbjct: 1460 FKPKQMQLQDKLDLASYLLKPVQRMGKYALLLQQLVKACKGVEGAALQEIAADVEELQRA 1519
Query: 459 ESMVRFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGKG-KKCLRHVFLFEEL 517
E MV+FQLRHGNDLLAMDSLR+CDVN+KEQGRLLRQNEF+V QG+G KK LR VFLFEEL
Sbjct: 1520 EEMVKFQLRHGNDLLAMDSLRDCDVNVKEQGRLLRQNEFLVWQGRGGKKTLRQVFLFEEL 1579
Query: 518 ILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSM 577
+LFSKARRFPD KNLD+YIYK+S+K SDIG+TA GDS+TKFEIWFRKRKP++T+ LQ M
Sbjct: 1580 VLFSKARRFPDHKNLDIYIYKNSIKTSDIGLTAHTGDSATKFEIWFRKRKPDDTWMLQCM 1639
Query: 578 SEDIKQAWTDELSNLLWKQALRNRAMRLQEMSSMGIGNKPCLDIRPSADQISDRSISITQ 637
SEDIK AWT+E+S LLWKQA RNR +RL EMSSMGIG+KPCLDIRPS +QISDRSI + Q
Sbjct: 1640 SEDIKNAWTEEISKLLWKQAKRNREVRLAEMSSMGIGSKPCLDIRPSNNQISDRSIPLAQ 1699
Query: 638 LNKTTPKFRNSIAVMPGSGGL 658
LNKT PK R+S PG G +
Sbjct: 1700 LNKT-PKLRHS---EPGKGSM 1716
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| UNIPROTKB|Q58EX7 PLEKHG4 "Puratrophin-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RF15 PLEKHG4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| RGD|1310790 Plekhg4 "pleckstrin homology domain containing, family G (with RhoGef domain) member 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RFX5 PLEKHG4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BEX3 PLEKHG4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1Q178 PLEKHG4B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96PX9 PLEKHG4B "Pleckstrin homology domain-containing family G member 4B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-9944 quo "quattro" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-090313-319 si:dkey-65j6.2 "si:dkey-65j6.2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q96PX9 | PKH4B_HUMAN | No assigned EC number | 0.5259 | 0.5013 | 0.2887 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 732 | |||
| cd13242 | 136 | cd13242, PH_puratrophin-1, Puratrophin-1 pleckstri | 2e-82 | |
| pfam00621 | 179 | pfam00621, RhoGEF, RhoGEF domain | 4e-40 | |
| cd00160 | 181 | cd00160, RhoGEF, Guanine nucleotide exchange facto | 9e-34 | |
| smart00325 | 180 | smart00325, RhoGEF, Guanine nucleotide exchange fa | 3e-31 | |
| cd13239 | 125 | cd13239, PH_Obscurin, Obscurin pleckstrin homology | 3e-20 | |
| cd13241 | 140 | cd13241, PH2_Kalirin_Trio_p63RhoGEF, p63RhoGEF ple | 2e-19 | |
| cd13240 | 123 | cd13240, PH1_Kalirin_Trio_like, Triple functional | 7e-18 | |
| cd01227 | 132 | cd01227, PH_Dbs, DBL's big sister protein pleckstr | 1e-16 | |
| cd13325 | 113 | cd13325, PH_unc89, unc89 pleckstrin homology (PH) | 6e-11 | |
| cd13243 | 147 | cd13243, PH_PLEKHG1_G2_G3, Pleckstrin homology dom | 5e-08 | |
| COG5422 | 1175 | COG5422, ROM1, RhoGEF, Guanine nucleotide exchange | 2e-07 | |
| smart00233 | 102 | smart00233, PH, Pleckstrin homology domain | 1e-05 | |
| cd01223 | 127 | cd01223, PH_Vav, Vav pleckstrin homology (PH) doma | 2e-04 | |
| pfam00169 | 101 | pfam00169, PH, PH domain | 0.002 |
| >gnl|CDD|241396 cd13242, PH_puratrophin-1, Puratrophin-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 2e-82
Identities = 92/139 (66%), Positives = 117/139 (84%), Gaps = 3/139 (2%)
Query: 463 RFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSK 522
+FQLRHGNDLLAMD++R CDVNLKEQG+LLRQ+EF+V QG+ KK LRHVFLFE+LILFSK
Sbjct: 1 KFQLRHGNDLLAMDAIRGCDVNLKEQGQLLRQDEFLVWQGR-KKSLRHVFLFEDLILFSK 59
Query: 523 ARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIK 582
++ P K D+YIYKHS+K +DIG+T +GDS KFEIWFR+RK +T+ LQ+ S +IK
Sbjct: 60 PKKTPGGK--DVYIYKHSIKTADIGLTENVGDSGLKFEIWFRRRKSRDTYILQATSPEIK 117
Query: 583 QAWTDELSNLLWKQALRNR 601
+AWT +++ LLWKQALRN+
Sbjct: 118 EAWTSDIAKLLWKQALRNK 136
|
Puratrophin-1 (also called Purkinje cell atrophy-associated protein 1 or PLEKHG4/Pleckstrin homology domain-containing family G member 4) contains a spectrin repeat, a RhoGEF (DH) domain, and a PH domain. It is thought to function in intracellular signaling and cytoskeleton dynamics at the Golgi. Puratrophin-1 is expressed in kidney, Leydig cells in the testis, epithelial cells in the prostate gland and Langerhans islet in the pancreas. A single nucleotide substitution in the puratrophin-1 gene were once thought to result in autosomal dominant cerebellar ataxia (ADCA), but now it has been demonstrated that this ataxia is a result of defects in the BEAN gene. Puratrophin contains a domain architecture similar to that of Dbl family members Dbs and Trio. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a RhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. Trio plays an essential role in regulating the actin cytoskeleton during axonal guidance and branching. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 136 |
| >gnl|CDD|216028 pfam00621, RhoGEF, RhoGEF domain | Back alignment and domain information |
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| >gnl|CDD|238091 cd00160, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain | Back alignment and domain information |
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| >gnl|CDD|214619 smart00325, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases | Back alignment and domain information |
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| >gnl|CDD|241393 cd13239, PH_Obscurin, Obscurin pleckstrin homology (PH) domain | Back alignment and domain information |
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| >gnl|CDD|241395 cd13241, PH2_Kalirin_Trio_p63RhoGEF, p63RhoGEF pleckstrin homology (PH) domain, repeat 2 | Back alignment and domain information |
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| >gnl|CDD|241394 cd13240, PH1_Kalirin_Trio_like, Triple functional domain pleckstrin homology pleckstrin homology (PH) domain, repeat 1 | Back alignment and domain information |
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| >gnl|CDD|241261 cd01227, PH_Dbs, DBL's big sister protein pleckstrin homology (PH) domain | Back alignment and domain information |
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| >gnl|CDD|241479 cd13325, PH_unc89, unc89 pleckstrin homology (PH) domain | Back alignment and domain information |
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| >gnl|CDD|241397 cd13243, PH_PLEKHG1_G2_G3, Pleckstrin homology domain-containing family G members 1, 2, and 3 pleckstrin homology (PH) domain | Back alignment and domain information |
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| >gnl|CDD|227709 COG5422, ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] | Back alignment and domain information |
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| >gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain | Back alignment and domain information |
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| >gnl|CDD|241257 cd01223, PH_Vav, Vav pleckstrin homology (PH) domain | Back alignment and domain information |
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| >gnl|CDD|215766 pfam00169, PH, PH domain | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| KOG0689|consensus | 448 | 100.0 | ||
| KOG2996|consensus | 865 | 100.0 | ||
| KOG4424|consensus | 623 | 100.0 | ||
| KOG4240|consensus | 1025 | 100.0 | ||
| KOG3518|consensus | 521 | 100.0 | ||
| KOG3521|consensus | 846 | 99.98 | ||
| KOG3520|consensus | 1167 | 99.97 | ||
| KOG3523|consensus | 695 | 99.97 | ||
| cd00160 | 181 | RhoGEF Guanine nucleotide exchange factor for Rho/ | 99.96 | |
| KOG4305|consensus | 1029 | 99.95 | ||
| KOG2070|consensus | 661 | 99.95 | ||
| smart00325 | 180 | RhoGEF Guanine nucleotide exchange factor for Rho/ | 99.95 | |
| PF00621 | 180 | RhoGEF: RhoGEF domain; InterPro: IPR000219 The Rho | 99.92 | |
| COG5422 | 1175 | ROM1 RhoGEF, Guanine nucleotide exchange factor fo | 99.86 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 99.86 | |
| KOG3522|consensus | 925 | 99.86 | ||
| KOG3519|consensus | 756 | 99.82 | ||
| cd01227 | 133 | PH_Dbs Dbs (DBL's big sister) pleckstrin homology | 99.82 | |
| KOG3524|consensus | 850 | 99.79 | ||
| KOG3531|consensus | 1036 | 99.72 | ||
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 99.64 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 99.5 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 99.47 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 99.43 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 99.42 | |
| cd01223 | 116 | PH_Vav Vav pleckstrin homology (PH) domain. Vav pl | 99.37 | |
| cd01228 | 96 | PH_BCR-related BCR (breakpoint cluster region)-rel | 99.34 | |
| cd01224 | 109 | PH_Collybistin Collybistin pleckstrin homology (PH | 99.27 | |
| KOG4269|consensus | 1112 | 99.15 | ||
| cd01221 | 125 | PH_ephexin Ephexin Pleckstrin homology (PH) domain | 99.11 | |
| cd01226 | 100 | PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin | 98.79 | |
| PF15411 | 116 | PH_10: Pleckstrin homology domain | 98.78 | |
| PF15405 | 135 | PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A. | 98.65 | |
| cd01225 | 111 | PH_Cool_Pix Cool (cloned out of library)/Pix (PAK- | 98.54 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 98.32 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 98.18 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 97.79 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 97.54 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 97.53 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 97.41 | |
| cd01255 | 160 | PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM | 97.38 | |
| KOG0931|consensus | 627 | 97.38 | ||
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 97.36 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 97.2 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 97.13 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 97.04 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 97.03 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 97.0 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 96.73 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 96.6 | |
| cd01229 | 129 | PH_etc2 Epithelial cell transforming 2 (ECT2) plec | 96.51 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 96.39 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 96.33 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 96.17 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 96.15 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 96.15 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 95.75 | |
| KOG0930|consensus | 395 | 95.33 | ||
| cd01230 | 117 | PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 | 95.13 | |
| KOG3524|consensus | 850 | 94.83 | ||
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 94.76 | |
| KOG0690|consensus | 516 | 94.02 | ||
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 93.89 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 93.81 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 93.49 | |
| KOG1729|consensus | 288 | 92.33 | ||
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 92.14 | |
| cd01263 | 122 | PH_anillin Anillin Pleckstrin homology (PH) domain | 91.99 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 89.97 | |
| cd01249 | 104 | PH_oligophrenin Oligophrenin Pleckstrin homology ( | 89.65 | |
| KOG0521|consensus | 785 | 89.58 | ||
| PF15404 | 185 | PH_4: Pleckstrin homology domain | 89.26 | |
| PF14593 | 104 | PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A. | 88.17 | |
| KOG3522|consensus | 925 | 88.09 | ||
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 86.88 | |
| KOG2059|consensus | 800 | 85.13 | ||
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 84.65 | |
| cd01248 | 115 | PH_PLC Phospholipase C (PLC) pleckstrin homology ( | 83.92 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 83.73 | |
| PF15410 | 119 | PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN | 83.64 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 81.15 | |
| PF15277 | 91 | Sec3-PIP2_bind: Exocyst complex component SEC3 N-t | 80.62 |
| >KOG0689|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-51 Score=444.49 Aligned_cols=344 Identities=46% Similarity=0.770 Sum_probs=323.2
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhc
Q psy9950 290 GVQTLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCAN 369 (732)
Q Consensus 290 ~~~~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~ 369 (732)
.....+..+++..++.|++.||..||++|..++++|+..+...++|..++++-+.||+||.+|++||...|+.+++.|..
T Consensus 53 ~~~~~~~~~k~~~v~~e~iaTE~~yv~~l~~~~~~y~~~~~~~~lp~~lrg~~~iifgni~~i~~~h~~~fl~e~e~~~r 132 (448)
T KOG0689|consen 53 DSSEIKALKKRSFVLDELIATEVDYVKDLKSVVENYIELLDAEDLPEDLRGKDKIIFGNIKEIYEFHKKEFLPELERCER 132 (448)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhhhccccccccccccccccCCChhccCCceeeechHHHHHHhhcccCcchHHHhhh
Confidence 45667778899999999999999999999999999999999999999999999999999999999997777999999999
Q ss_pred CCCchHHHHhhhhhhhh-hHHHhhhchHHHHHHHHHHh-HHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhc
Q psy9950 370 LPLSVGQCFLNHENKFY-LYALYNKNKPKSDALMTEYG-SSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKA 447 (732)
Q Consensus 370 ~~~~Ig~iFl~~~~~f~-~Y~~Y~~n~~~a~~~L~~~~-~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~ 447 (732)
.+..+|++|++|...|. +|..||.|++.+...+.+.. ..||+..+.++.++++|.+||++|||||.||+|||+++++.
T Consensus 133 ~~~~~~~~f~kh~~k~~~~y~~y~q~kp~s~~~~~~~~~~~~f~~~~~~~~~~l~l~~~l~kPiQR~~kYqlLL~~~~k~ 212 (448)
T KOG0689|consen 133 DPLELGQAFAKHERKNSVLYVTYCQNKPKSDYLLAEYDNEAFFQEYQTQLGHKLDLSSYLIKPVQRIMKYQLLLQDFLKF 212 (448)
T ss_pred CHHHHHHHHHHHHHHhhhhhhhhhcCCCCCcccceecccchhhHHHhhhcccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999988888776 78999999999999999999999999999999999999999
Q ss_pred Cc---ccHHHHHHHHHHHHHHhhhhhhHhhhhhhccccccccccccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEe
Q psy9950 448 SR---QDVKDIKEAESMVRFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKA 523 (732)
Q Consensus 448 T~---~d~~dL~~Al~~v~~~~~~iNd~~~~~~i~~~~~~L~~~grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~ 523 (732)
+. .|..+|.+|.++|..+.+++|+.+.+..+++|..+++.+|.++.+++|.|+.++ |+++.|.+|||+.++||+|.
T Consensus 213 ~~~~~~d~~~l~~a~e~m~~~~~~~~d~~~~~~l~g~e~~l~~qG~l~~qd~f~v~~~~~~~~~~R~vflFe~~v~Fse~ 292 (448)
T KOG0689|consen 213 CEKAGDDTDALCKAEEVMRFVLKRCNDMMQVGRLQGFEGDLKAQGKLRRQDEFDVSHGRAGKKKDRRVFLFERLVVFSKL 292 (448)
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHhHhhhccchhcccccchHhhccccccCccceeeccccccchhhhhhhhhhhhhhhh
Confidence 98 567889999999999999999999999999999999999999999999999987 66789999999999999998
Q ss_pred eeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHHH-HHHhHH
Q psy9950 524 RRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQ-ALRNRA 602 (732)
Q Consensus 524 kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q-~~~~r~ 602 (732)
... .++.+.|+||..|++++++++++.++++..|+|||+.++..++|+|+|.|.++|.+|+.+|...+|.| +..+++
T Consensus 293 ~~~--~~~~~~y~yk~~ik~~~lgle~n~~~s~~rF~i~~r~~~~~~~~vlqa~s~~~k~~W~~~i~~~l~~Q~a~~n~~ 370 (448)
T KOG0689|consen 293 RKP--ESGTETYVYKQHIKVNDLGLEENNDNSASRFEIWFRGRKKREAYVLQAGSKEIKYAWTRAISSLLWQQKALLNKL 370 (448)
T ss_pred hcC--CCCCcceeeecchhhhheeeeccCCCCCcchhhhhhcccccceeEEeeCCHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 753 46788999999999999999999999999999999988888999999999999999999999999999 999999
Q ss_pred HHHHHHhhcCCCCCCccCCCCC-ccccccccchh
Q psy9950 603 MRLQEMSSMGIGNKPCLDIRPS-ADQISDRSISI 635 (732)
Q Consensus 603 ~rl~e~~~~gi~~~p~~di~ps-~~~i~dr~~~~ 635 (732)
.+++++.+|+.+++++.++.|+ +..++++.++.
T Consensus 371 ~~p~~~~s~~~~~~~~~~~~~~g~~~~~~~~~n~ 404 (448)
T KOG0689|consen 371 VRPARYESMESGNKSLSDIAPLGDRTLSRLATND 404 (448)
T ss_pred hhhHHHhhhcccccccccCCCCCccccchhhccc
Confidence 9999999999999999999998 55666665554
|
|
| >KOG2996|consensus | Back alignment and domain information |
|---|
| >KOG4424|consensus | Back alignment and domain information |
|---|
| >KOG4240|consensus | Back alignment and domain information |
|---|
| >KOG3518|consensus | Back alignment and domain information |
|---|
| >KOG3521|consensus | Back alignment and domain information |
|---|
| >KOG3520|consensus | Back alignment and domain information |
|---|
| >KOG3523|consensus | Back alignment and domain information |
|---|
| >cd00160 RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain | Back alignment and domain information |
|---|
| >KOG4305|consensus | Back alignment and domain information |
|---|
| >KOG2070|consensus | Back alignment and domain information |
|---|
| >smart00325 RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases | Back alignment and domain information |
|---|
| >PF00621 RhoGEF: RhoGEF domain; InterPro: IPR000219 The Rho family GTPases Rho, Rac and CDC42 regulate a diverse array of cellular processes | Back alignment and domain information |
|---|
| >COG5422 ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3522|consensus | Back alignment and domain information |
|---|
| >KOG3519|consensus | Back alignment and domain information |
|---|
| >cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3524|consensus | Back alignment and domain information |
|---|
| >KOG3531|consensus | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01223 PH_Vav Vav pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4269|consensus | Back alignment and domain information |
|---|
| >cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >PF15411 PH_10: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A | Back alignment and domain information |
|---|
| >cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0931|consensus | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01229 PH_etc2 Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0930|consensus | Back alignment and domain information |
|---|
| >cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3524|consensus | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0690|consensus | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1729|consensus | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0521|consensus | Back alignment and domain information |
|---|
| >PF15404 PH_4: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A | Back alignment and domain information |
|---|
| >KOG3522|consensus | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2059|consensus | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
| >PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 732 | ||||
| 2rgn_B | 354 | Crystal Structure Of P63rhogef Complex With Galpha- | 2e-48 | ||
| 1rj2_A | 353 | Crystal Structure Of The DhPH FRAGMENT OF DBS WITHO | 9e-47 | ||
| 1lb1_A | 353 | Crystal Structure Of The Dbl And Pleckstrin Homolog | 1e-46 | ||
| 1kzg_A | 353 | Dbscdc42(Y889f) Length = 353 | 3e-46 | ||
| 1nty_A | 311 | Crystal Structure Of The First DhPH DOMAIN OF TRIO | 8e-44 | ||
| 2nz8_B | 313 | N-Terminal Dhph Cassette Of Trio In Complex With Nu | 8e-44 | ||
| 1kz7_A | 353 | Crystal Structure Of The DhPH FRAGMENT OF MURINE DB | 1e-43 | ||
| 2kr9_A | 190 | Kalirin Dh1 Nmr Structure Length = 190 | 3e-30 | ||
| 2pz1_A | 466 | Crystal Structure Of Auto-Inhibited Asef Length = 4 | 2e-14 | ||
| 2dx1_A | 482 | Crystal Structure Of Rhogef Protein Asef Length = 4 | 3e-14 | ||
| 2dfk_A | 402 | Crystal Structure Of The Cdc42-Collybistin Ii Compl | 1e-12 | ||
| 3ky9_A | 587 | Autoinhibited Vav1 Length = 587 | 2e-10 | ||
| 3bji_A | 378 | Structural Basis Of Promiscuous Guanine Nucleotide | 6e-10 | ||
| 1by1_A | 209 | Dbl Homology Domain From Beta-Pix Length = 209 | 8e-10 | ||
| 1foe_A | 377 | Crystal Structure Of Rac1 In Complex With The Guani | 1e-09 | ||
| 2vrw_B | 406 | Critical Structural Role For The Ph And C1 Domains | 1e-09 | ||
| 1f5x_A | 208 | Nmr Structure Of The Y174 Autoinhibited Dbl Homolog | 3e-08 |
| >pdb|2RGN|B Chain B, Crystal Structure Of P63rhogef Complex With Galpha-Q And Rhoa Length = 354 | Back alignment and structure |
|
| >pdb|1RJ2|A Chain A, Crystal Structure Of The DhPH FRAGMENT OF DBS WITHOUT Bound Gtpase Length = 353 | Back alignment and structure |
| >pdb|1LB1|A Chain A, Crystal Structure Of The Dbl And Pleckstrin Homology Domains Of Dbs In Complex With Rhoa Length = 353 | Back alignment and structure |
| >pdb|1KZG|A Chain A, Dbscdc42(Y889f) Length = 353 | Back alignment and structure |
| >pdb|1NTY|A Chain A, Crystal Structure Of The First DhPH DOMAIN OF TRIO TO 1.7 A Length = 311 | Back alignment and structure |
| >pdb|2NZ8|B Chain B, N-Terminal Dhph Cassette Of Trio In Complex With Nucleotide- Free Rac1 Length = 313 | Back alignment and structure |
| >pdb|1KZ7|A Chain A, Crystal Structure Of The DhPH FRAGMENT OF MURINE DBS IN Complex With The Placental Isoform Of Human Cdc42 Length = 353 | Back alignment and structure |
| >pdb|2KR9|A Chain A, Kalirin Dh1 Nmr Structure Length = 190 | Back alignment and structure |
| >pdb|2PZ1|A Chain A, Crystal Structure Of Auto-Inhibited Asef Length = 466 | Back alignment and structure |
| >pdb|2DX1|A Chain A, Crystal Structure Of Rhogef Protein Asef Length = 482 | Back alignment and structure |
| >pdb|2DFK|A Chain A, Crystal Structure Of The Cdc42-Collybistin Ii Complex Length = 402 | Back alignment and structure |
| >pdb|3KY9|A Chain A, Autoinhibited Vav1 Length = 587 | Back alignment and structure |
| >pdb|3BJI|A Chain A, Structural Basis Of Promiscuous Guanine Nucleotide Exchange By The T-Cell Essential Vav1 Length = 378 | Back alignment and structure |
| >pdb|1BY1|A Chain A, Dbl Homology Domain From Beta-Pix Length = 209 | Back alignment and structure |
| >pdb|1FOE|A Chain A, Crystal Structure Of Rac1 In Complex With The Guanine Nucleotide Exchange Region Of Tiam1 Length = 377 | Back alignment and structure |
| >pdb|2VRW|B Chain B, Critical Structural Role For The Ph And C1 Domains Of The Vav1 Exchange Factor Length = 406 | Back alignment and structure |
| >pdb|1F5X|A Chain A, Nmr Structure Of The Y174 Autoinhibited Dbl Homology Domain Length = 208 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-112
Identities = 105/345 (30%), Positives = 194/345 (56%), Gaps = 19/345 (5%)
Query: 295 KTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYE 354
K + ++++ E+++TE+ YV L ++ Y+ + + +P++LRG+ ++FGNI++IYE
Sbjct: 8 KALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFGNIQQIYE 67
Query: 355 FHSQHFLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQ 414
+H +FL EL++C P + Q F+ HE + ++Y +Y +NKPKS+ +++E+G S+F+ +
Sbjct: 68 WHRDYFLQELQRCLKDPDWLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEFGDSYFEELR 127
Query: 415 LELADRMDLASYLLKPVQRMGKYALLLQQLMK---ASRQDVKDIKEAESMVRFQLRHGND 471
+L R+ L L+KPVQR+ KY LLL+ +K + D D+++A ++ F + ND
Sbjct: 128 QQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTADLEQAVEVMCFVPKRCND 187
Query: 472 LLAMDSLRECDVNLKEQGRLLRQNEFIVSQGK------GKKCLRHVFLFEELILFSKARR 525
++ + LR + L QG+LL Q+ F V++ + + R VFLFE++I+FS+A
Sbjct: 188 MMTLGRLRGFEGKLTAQGKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALG 247
Query: 526 FPDRK-NLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRK-PNETFTLQSMSEDIKQ 583
R Y+YK+S+K+S +G+ + +F + R + + + LQ+ I Q
Sbjct: 248 GGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQ 307
Query: 584 AWTDELSNLLWKQALRNRAM--------RLQEMSSMGIGNKPCLD 620
AW ++ +L Q A+ R + +S+G P +
Sbjct: 308 AWIKHVAQILESQRDFLNALQSPIEYQRRESQTNSLGRPRGPGVG 352
|
| >1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A Length = 311 | Back alignment and structure |
|---|
| >1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A Length = 353 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587 | Back alignment and structure |
|---|
| >1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 Length = 377 | Back alignment and structure |
|---|
| >2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 Length = 402 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A Length = 354 | Back alignment and structure |
|---|
| >2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466 | Back alignment and structure |
|---|
| >1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1 Length = 209 | Back alignment and structure |
|---|
| >2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A Length = 346 | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B Length = 510 | Back alignment and structure |
|---|
| >3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A Length = 283 | Back alignment and structure |
|---|
| >1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1 Length = 119 | Back alignment and structure |
|---|
| >1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A* Length = 368 | Back alignment and structure |
|---|
| >3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
| >1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A Length = 385 | Back alignment and structure |
|---|
| >3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A Length = 377 | Back alignment and structure |
|---|
| >3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A Length = 536 | Back alignment and structure |
|---|
| >3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A Length = 1049 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 132 | Back alignment and structure |
|---|
| >2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens} Length = 185 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| 1nty_A | 311 | Triple functional domain protein; DBL, pleckstrin, | 100.0 | |
| 1kz7_A | 353 | Guanine nucleotide exchange factor DBS; guanine nu | 100.0 | |
| 2rgn_B | 354 | RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p | 100.0 | |
| 3ky9_A | 587 | Proto-oncogene VAV; calponin homology domain, DBL | 100.0 | |
| 2dfk_A | 402 | Collybistin II; DH domain, PH domain, cell cycle; | 100.0 | |
| 3t06_A | 418 | PDZ-rhogef, RHO guanine nucleotide exchange factor | 100.0 | |
| 2z0q_A | 346 | XPLN, RHO guanine nucleotide exchange factor 3; DH | 100.0 | |
| 2vrw_B | 406 | P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP | 100.0 | |
| 1foe_A | 377 | T-lymphoma invasion and metastasis inducing protei | 100.0 | |
| 1xcg_A | 368 | PDZ-rhogef, RHO guanine nucleotide exchange factor | 100.0 | |
| 2pz1_A | 466 | RHO guanine nucleotide exchange factor 4; helical | 100.0 | |
| 3p6a_A | 377 | RHO guanine nucleotide exchange factor 1; regulati | 100.0 | |
| 1txd_A | 385 | RHO guanine nucleotide exchange factor 12; helical | 100.0 | |
| 3odw_A | 536 | RHO guanine nucleotide exchange factor 1; regulati | 100.0 | |
| 3mpx_A | 434 | FYVE, rhogef and PH domain-containing protein 5; s | 100.0 | |
| 1dbh_A | 354 | Protein (human SOS 1); guanine nucleotide exchange | 100.0 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 100.0 | |
| 3ksy_A | 1049 | SOS-1, SON of sevenless homolog 1; RAS, RAS activa | 100.0 | |
| 1by1_A | 209 | Protein (PIX); RHO-GTPase exchange factor, transpo | 100.0 | |
| 3jv3_A | 283 | Intersectin-1; SH3 domain, DH domain, guanine nucl | 99.97 | |
| 1fho_A | 119 | UNC-89; pleckstrin homology domain, electrostatics | 99.74 | |
| 2lg1_A | 185 | A-kinase anchor protein 13; metal binding protein; | 99.48 | |
| 3qwm_A | 140 | Iqsec1, IQ motif and SEC7 domain-containing protei | 99.21 | |
| 1zc3_B | 113 | Exocyst complex protein EXO84; exocytosis, small G | 99.16 | |
| 1v61_A | 132 | RAC/CDC42 guanine nucleotide exchange factor (GEF) | 99.13 | |
| 4gou_A | 518 | EHRGS-rhogef; RGS domain, DH domain, PH domain, RH | 98.49 | |
| 2i5f_A | 109 | Pleckstrin; PH domain, protein-inositol phosphate | 97.83 | |
| 2dn6_A | 115 | KIAA0640 protein; PH domain, structural genomics, | 97.73 | |
| 1u5d_A | 108 | SKAP55, SRC kinase-associated phosphoprotein of 55 | 97.68 | |
| 1x05_A | 129 | Pleckstrin; PH domain, structural genomics, NPPSFA | 97.67 | |
| 2cod_A | 115 | Centaurin-delta 1; ARF GAP and RHO GAP with ankyri | 97.66 | |
| 1pls_A | 113 | Pleckstrin homology domain; phosphorylation; NMR { | 97.61 | |
| 1v89_A | 118 | Hypothetical protein KIAA0053; pleckstrin homology | 97.59 | |
| 1unq_A | 125 | RAC-alpha serine/threonine kinase; transferase, pl | 97.58 | |
| 2lul_A | 164 | Tyrosine-protein kinase TEC; structural genomics, | 97.57 | |
| 4a6h_A | 120 | Phosphatidylinositol 4,5-bisphosphate-binding Pro | 97.55 | |
| 1btk_A | 169 | Bruton'S tyrosine kinase; transferase, PH domain, | 97.54 | |
| 3rcp_A | 103 | Pleckstrin homology domain-containing family A ME; | 97.52 | |
| 1eaz_A | 125 | Tandem PH domain containing protein-1; lipid-bindi | 97.52 | |
| 1x1g_A | 129 | Pleckstrin 2; PH domain, structural genomics, rike | 97.51 | |
| 2d9x_A | 120 | Oxysterol binding protein-related protein 11; PH d | 97.51 | |
| 1v88_A | 130 | Oxysterol binding protein-related protein 8; vesic | 97.43 | |
| 1fgy_A | 127 | GRP1; PH domain, signaling protein; HET: 4IP; 1.50 | 97.43 | |
| 1wg7_A | 150 | Dedicator of cytokinesis protein 9; pleckstrin hom | 97.4 | |
| 1fao_A | 126 | Dual adaptor of phosphotyrosine and 3- phosphoinos | 97.39 | |
| 2rsg_A | 94 | Collagen type IV alpha-3-binding protein; pleckstr | 97.37 | |
| 2dkp_A | 128 | Pleckstrin homology domain-containing family A mem | 97.36 | |
| 2dhk_A | 119 | TBC1 domain family member 2; PH domain, paris-1, s | 97.35 | |
| 1v5u_A | 117 | SBF1, SET binding factor 1; MTMR5, the pleckstrin | 97.34 | |
| 2w2x_D | 124 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 97.34 | |
| 2d9y_A | 117 | Pleckstrin homology domain-containing protein fami | 97.3 | |
| 1wgq_A | 109 | FYVE, rhogef and PH domain containing 6; ethanol d | 97.27 | |
| 1x1f_A | 149 | Signal-transducing adaptor protein 1; docking prot | 97.25 | |
| 1upq_A | 123 | PEPP1; PH domain, phosphoinositide binding, signal | 97.23 | |
| 1u5f_A | 148 | SRC-associated adaptor protein; PH domain of SKAP- | 97.22 | |
| 3tfm_A | 228 | Myosin X; split PH domain, motor protein; 2.53A {R | 97.18 | |
| 2yry_A | 122 | Pleckstrin homology domain-containing family A mem | 97.18 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 97.17 | |
| 2cof_A | 107 | Protein KIAA1914; PH domain, structural genomics, | 97.16 | |
| 2rlo_A | 128 | Centaurin-gamma 1; split PH domain, alternative sp | 97.14 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 97.13 | |
| 2da0_A | 114 | 130-kDa phosphatidylinositol 4,5-biphosphate- depe | 97.1 | |
| 2p0d_A | 129 | RHO GTPase-activating protein 9; protein-phosphoin | 96.91 | |
| 2y7b_A | 134 | Actin-binding protein anillin; cell cycle; 1.90A { | 96.88 | |
| 1dyn_A | 125 | Dynamin; signal transduction protein; 2.20A {Homo | 96.87 | |
| 1u5e_A | 211 | SRC-associated adaptor protein; novel dimerization | 96.82 | |
| 2fjl_A | 150 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 96.81 | |
| 1wi1_A | 126 | Calcium-dependent activator protein for secretion, | 96.68 | |
| 2dtc_A | 126 | RAL guanine nucleotide exchange factor ralgps1A; P | 96.65 | |
| 1wjm_A | 123 | Beta-spectrin III; PH domain, signal transduction, | 96.44 | |
| 3aj4_A | 112 | Pleckstrin homology domain-containing family B ME; | 96.43 | |
| 3a8p_A | 263 | T-lymphoma invasion and metastasis-inducing protei | 96.42 | |
| 2j59_M | 168 | RHO-GTPase activating protein 10; ARF, ARF1, ARFBD | 96.35 | |
| 3cxb_B | 112 | Pleckstrin homology domain-containing family M mem | 96.23 | |
| 1v5p_A | 126 | Pleckstrin homology domain-containing, family A; T | 96.13 | |
| 2coc_A | 112 | FYVE, rhogef and PH domain containing protein 3; s | 95.93 | |
| 2d9v_A | 130 | Pleckstrin homology domain-containing protein fami | 95.87 | |
| 3pp2_A | 124 | RHO GTPase-activating protein 27; PH domain, GTPas | 95.86 | |
| 2r09_A | 347 | Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph | 95.72 | |
| 1qqg_A | 264 | IRS-1, insulin receptor substrate 1; beta-sandwhic | 95.65 | |
| 1btn_A | 106 | Beta-spectrin; signal transduction protein; HET: I | 95.58 | |
| 1dro_A | 122 | Beta-spectrin; cytoskeleton; NMR {Drosophila melan | 95.07 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 95.02 | |
| 2ys3_A | 137 | UNC-112-related protein 2; PH domain, kindlin-3, s | 94.87 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 94.58 | |
| 3tca_A | 291 | Amyloid beta A4 precursor protein-binding family 1 | 94.37 | |
| 4f7h_A | 173 | Fermitin family homolog 2; beta-barrel, membrane b | 94.24 | |
| 2rov_A | 117 | RHO-associated protein kinase 2; ATP-binding, coil | 94.11 | |
| 3hk0_A | 256 | Growth factor receptor-bound protein 10; GRB10, RA | 93.52 | |
| 1mai_A | 131 | Phospholipase C delta-1; pleckstrin, inositol tris | 93.51 | |
| 2d9w_A | 127 | Docking protein 2; PH domain, structural genomics, | 93.5 | |
| 4gmv_A | 281 | RAS-associated and pleckstrin homology domains-CO | 91.46 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 90.72 | |
| 4bbk_A | 165 | Kindlin-1, fermitin family homolog 1; PH domain, c | 90.47 | |
| 1w1g_A | 151 | HPDK1, 3-phosphoinositide dependent protein kinase | 89.03 | |
| 3hie_A | 171 | Protein PSL1, exocyst complex component SEC3; PH d | 88.3 | |
| 3a8n_A | 279 | TIAM-1, T-lymphoma invasion and metastasis-inducin | 86.98 | |
| 3a58_A | 320 | Exocyst complex component SEC3; protein complex, P | 86.42 | |
| 3lbx_A | 161 | Spectrin alpha chain, erythrocyte; tetramer, compl | 85.5 |
| >1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=450.75 Aligned_cols=299 Identities=34% Similarity=0.607 Sum_probs=270.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCchhhhhhHHHHhCCHHHHHHHHHHH-HHHHHHHHhcC
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTRE--DIPQALRGQRNVIFGNIEKIYEFHSQH-FLGELEQCANL 370 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~--~~p~~l~~~~~~IF~NIe~I~~~Hs~~-fL~~Le~~~~~ 370 (732)
.|+.+||++||+||++||++||++|+.++++|+.||... .+|..+.+++..||+||++|+++| .. ||.+|+.+...
T Consensus 4 ~k~~~kR~~vi~El~~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~~~~iF~ni~~i~~~h-~~~fl~~L~~~~~~ 82 (311)
T 1nty_A 4 RKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFH-NNIFLKELEKYEQL 82 (311)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTTTCHHHHHTTHHHHHHHH-HHTHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChhhhhhHHHhhcCHHHHHHHH-HHHHHHHHHHHHCC
Confidence 466789999999999999999999999999999999863 467666678899999999999999 55 99999999988
Q ss_pred CCchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHhHHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhcCcc
Q psy9950 371 PLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASRQ 450 (732)
Q Consensus 371 ~~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~T~~ 450 (732)
+..||++|+++++.|++|..||.|++.|..++.+....||+.++...+.+++|.+||++|||||+||+|||++|+|+|++
T Consensus 83 ~~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~f~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~ 162 (311)
T 1nty_A 83 PEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEE 162 (311)
T ss_dssp GGGTHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHTCSSCHHHHHTHHHHHHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHhhhhHHHHHHHHHHHHHHHHhCCC
Confidence 88999999999999999999999999999999887788999988877889999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhhhhhHhhhhhhccccccccccccccccccEEEEeCC---CCeeEEEEEccCCeEEEEEeeeCC
Q psy9950 451 DVKDIKEAESMVRFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGK---GKKCLRHVFLFEELILFSKARRFP 527 (732)
Q Consensus 451 d~~dL~~Al~~v~~~~~~iNd~~~~~~i~~~~~~L~~~grll~~g~l~v~~~~---~kk~~r~vFLF~D~LL~~K~kk~~ 527 (732)
+|++|++|+++|+.++.++|+.+.+..+++++..+...|+++.+|.+.++.++ +++++||+|||+|+||+||+++.
T Consensus 163 ~h~~l~~Al~~~~~v~~~~N~~~~~~~l~~~~~~l~~~g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~- 241 (311)
T 1nty_A 163 GKGEIKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKD- 241 (311)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHTTEESCCSCSGGGCCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEEC-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHhcCCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeecc-
Confidence 99999999999999999999999888899999899999999999999998764 46789999999999999999853
Q ss_pred CCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEee-cCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 528 DRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRK-RKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 528 ~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~-~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
..+...|.||..|++.++.|++..+++++.|.||+.+ ..+...|+|+|+|+++|+.|+++|+++|.+
T Consensus 242 -~~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 242 -SSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp -TTCCEEEEEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceeEEeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 2345689999999999999999888888999999843 345678999999999999999999999854
|
| >1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A | Back alignment and structure |
|---|
| >2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A | Back alignment and structure |
|---|
| >2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 | Back alignment and structure |
|---|
| >3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens} | Back alignment and structure |
|---|
| >2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A | Back alignment and structure |
|---|
| >1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 | Back alignment and structure |
|---|
| >1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A* | Back alignment and structure |
|---|
| >2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D | Back alignment and structure |
|---|
| >3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A | Back alignment and structure |
|---|
| >1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A | Back alignment and structure |
|---|
| >3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
| >3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A | Back alignment and structure |
|---|
| >1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1 | Back alignment and structure |
|---|
| >3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A | Back alignment and structure |
|---|
| >1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens} | Back alignment and structure |
|---|
| >1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B* | Back alignment and structure |
|---|
| >1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A | Back alignment and structure |
|---|
| >1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A | Back alignment and structure |
|---|
| >2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A | Back alignment and structure |
|---|
| >3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* | Back alignment and structure |
|---|
| >1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus} | Back alignment and structure |
|---|
| >4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A | Back alignment and structure |
|---|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
| >4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus} | Back alignment and structure |
|---|
| >1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A | Back alignment and structure |
|---|
| >3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} | Back alignment and structure |
|---|
| >3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 732 | ||||
| d1ntya1 | 184 | a.87.1.1 (A:1231-1414) Triple functional domain pr | 1e-42 | |
| d1kz7a1 | 195 | a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse | 8e-39 | |
| d1by1a_ | 209 | a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxI | 1e-32 | |
| d1foea1 | 206 | a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma in | 2e-30 | |
| d1f5xa_ | 208 | a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [Ta | 3e-29 | |
| d1kz7a2 | 147 | b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse | 5e-29 | |
| d1ntya2 | 121 | b.55.1.1 (A:1415-1535) Triple functional domain pr | 6e-29 | |
| d2dfka1 | 203 | a.87.1.1 (A:37-239) Rho guanine nucleotide exchang | 3e-27 | |
| d1fhoa_ | 119 | b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis ele | 5e-27 | |
| d1ki1b1 | 210 | a.87.1.1 (B:1229-1438) GEF of intersectin {Human ( | 2e-26 | |
| d1xcga1 | 228 | a.87.1.1 (A:714-941) Rho guanine nucleotide exchan | 3e-26 | |
| d1dbha1 | 207 | a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {H | 2e-23 | |
| d1txda1 | 234 | a.87.1.1 (A:766-999) Rho guanine nucleotide exchan | 6e-23 | |
| d1dbha2 | 133 | b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {H | 2e-17 | |
| d1txda2 | 114 | b.55.1.1 (A:1020-1133) Rho guanine nucleotide exch | 3e-17 | |
| d1v61a_ | 132 | b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (M | 5e-10 | |
| d2dfka2 | 162 | b.55.1.1 (A:240-401) Rho guanine nucleotide exchan | 3e-09 | |
| d1xcga2 | 140 | b.55.1.1 (A:942-1081) Rho guanine nucleotide excha | 5e-09 | |
| d1ki1b2 | 142 | b.55.1.1 (B:1439-1580) GEF of intersectin {Human ( | 7e-09 | |
| d1zc3b1 | 109 | b.55.1.1 (B:171-279) Exocyst complex protein EXO84 | 2e-07 | |
| d1boba_ | 315 | d.108.1.1 (A:) Histone acetyltransferase HAT1 {Bak | 0.002 |
| >d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Length = 184 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: DBL homology domain (DH-domain) superfamily: DBL homology domain (DH-domain) family: DBL homology domain (DH-domain) domain: Triple functional domain protein TRIO species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 1e-42
Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 2/179 (1%)
Query: 302 FIMREMIQTERDYVKSLEYVILNYIPELTR--EDIPQALRGQRNVIFGNIEKIYEFHSQH 359
FIM E+IQTE+ YV+ L + Y+ E+T E+IP + + +IFGN+++IYEFH+
Sbjct: 6 FIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNI 65
Query: 360 FLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELAD 419
FL ELE+ LP VG CF+ +KF +Y Y KNKP S L+ E+ S+F Q
Sbjct: 66 FLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGL 125
Query: 420 RMDLASYLLKPVQRMGKYALLLQQLMKASRQDVKDIKEAESMVRFQLRHGNDLLAMDSL 478
++SYL+KPVQR+ KY LLL++L+ + +IK+ ++ + ND + + L
Sbjct: 126 ANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSML 184
|
| >d1kz7a1 a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} Length = 195 | Back information, alignment and structure |
|---|
| >d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]} Length = 209 | Back information, alignment and structure |
|---|
| >d1foea1 a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 206 | Back information, alignment and structure |
|---|
| >d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]} Length = 208 | Back information, alignment and structure |
|---|
| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} Length = 147 | Back information, alignment and structure |
|---|
| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Length = 121 | Back information, alignment and structure |
|---|
| >d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 203 | Back information, alignment and structure |
|---|
| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 119 | Back information, alignment and structure |
|---|
| >d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} Length = 210 | Back information, alignment and structure |
|---|
| >d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} Length = 228 | Back information, alignment and structure |
|---|
| >d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
| >d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Length = 234 | Back information, alignment and structure |
|---|
| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Length = 114 | Back information, alignment and structure |
|---|
| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} Length = 132 | Back information, alignment and structure |
|---|
| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 162 | Back information, alignment and structure |
|---|
| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} Length = 140 | Back information, alignment and structure |
|---|
| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} Length = 142 | Back information, alignment and structure |
|---|
| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 109 | Back information, alignment and structure |
|---|
| >d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 315 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| d1ntya1 | 184 | Triple functional domain protein TRIO {Human (Homo | 100.0 | |
| d1kz7a1 | 195 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 100.0 | |
| d2dfka1 | 203 | Rho guanine nucleotide exchange factor 9, Collybis | 99.97 | |
| d1foea1 | 206 | GEF of TIAM1 (T-Lymphoma invasion and metastasis i | 99.97 | |
| d1f5xa_ | 208 | RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]} | 99.96 | |
| d1by1a_ | 209 | beta-pix {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1ki1b1 | 210 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 99.96 | |
| d1xcga1 | 228 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 99.95 | |
| d1txda1 | 234 | Rho guanine nucleotide exchange factor 12 {Human ( | 99.95 | |
| d1dbha1 | 207 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 99.95 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 99.8 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 99.79 | |
| d1fhoa_ | 119 | UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: | 99.7 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 99.6 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 99.5 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 99.46 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 99.45 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 99.43 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 99.42 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 99.41 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 97.92 | |
| d1foea2 | 162 | GEF of TIAM1 (T-Lymphoma invasion and metastasis i | 97.92 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.88 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.86 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 97.78 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 97.77 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 97.77 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 97.69 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 97.61 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 97.6 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 97.6 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 97.58 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 97.54 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 97.52 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 97.47 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.44 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 97.3 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 97.17 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 97.1 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 96.97 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 96.96 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 96.89 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 96.85 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 96.8 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 96.77 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 96.53 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 96.51 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 96.42 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 96.35 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 96.34 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 96.24 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 96.22 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 96.14 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 96.04 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 95.97 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 95.76 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 95.35 |
| >d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: DBL homology domain (DH-domain) superfamily: DBL homology domain (DH-domain) family: DBL homology domain (DH-domain) domain: Triple functional domain protein TRIO species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-34 Score=282.16 Aligned_cols=180 Identities=38% Similarity=0.659 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCchH
Q psy9950 298 KNLLFIMREMIQTERDYVKSLEYVILNYIPELTRE--DIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLPLSVG 375 (732)
Q Consensus 298 ~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~--~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~~~Ig 375 (732)
+||+.||+||++||+.||++|+.+.+.|+.||... ..+..+.++...||+||++|+.+|+..|++.|+.+...+..||
T Consensus 2 ~KR~~ii~El~~TE~~Yv~~L~~l~~~y~~pl~~~~~~~~~~~~~~~~~iF~ni~~i~~~h~~~ll~~l~~~~~~~~~ig 81 (184)
T d1ntya1 2 RRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKYEQLPEDVG 81 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTTTCHHHHHTTHHHHHHHHHHTHHHHHHHTTTCGGGTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchhHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCchHHH
Confidence 68999999999999999999999999999999853 3455555677889999999999996558999999888888999
Q ss_pred HHHhhhhhhhhhHHHhhhchHHHHHHHHHHhHHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhcCcccHHHH
Q psy9950 376 QCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASRQDVKDI 455 (732)
Q Consensus 376 ~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~T~~d~~dL 455 (732)
++|+++.+.|++|..||.|++.|...+.+....||+.+......+.+|.+||++|||||+||+|||++|+|+|+++|+|+
T Consensus 82 ~~fl~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~Li~PvQRl~rY~lLL~~llk~T~~~~~dl 161 (184)
T d1ntya1 82 HCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEI 161 (184)
T ss_dssp HHHHHTTTTTHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHTCSSCHHHHHTHHHHHHHHHHHHHHHHHHTSCTTCTTH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHhHHHHHHHHhhccccCHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999999999999999888999998888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhHhhhhh
Q psy9950 456 KEAESMVRFQLRHGNDLLAMDS 477 (732)
Q Consensus 456 ~~Al~~v~~~~~~iNd~~~~~~ 477 (732)
++|+++|+.+++++|+.+.+..
T Consensus 162 ~~al~~i~~v~~~ine~~~~s~ 183 (184)
T d1ntya1 162 KDGLEVMLSVPKRANDAMHLSM 183 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999887654
|
| >d1kz7a1 a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1foea1 a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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