Psyllid ID: psy9954

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MTTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGYQEGEAAQFSF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccccccEccccHHHEEEEcccccccccccHccHccccccHHHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
MTTIFDFlcsqfphcAKAFSRLENLKIhqrshtgerpysctyegchkafsnssdrakhqrthfdtrpykcmykgctkrytdpsslrkhaknhnhdhltpakmrklnyakpgdivpsvrnvnssvplnpdftvfscgepnllmesYELQTVThdhmleyipydtihatgnisrnlqdvpdlglgfgyqegeaaqfsf
Flexible Loop (DISEMBL)
mttifdflcsqFPHCAKAFSRLENLKIHqrshtgerpyscTYEGCHKAfsnssdrakhqrthfdtrpykcmykgCTKRYTDPSSLRKhaknhnhdhltpakmRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGYQEGEAAQFSF
Low Complexity Region (SEG)
MTTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIvpsvrnvnssvplnpDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGYQEGEAAQFSF
Disordered region (IsUnstruct)
**TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKA**************FDTRPYKCMYKGCTKRY*********************************IVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGY**********
Disordered Region (DISOPRED)
MTTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNI**************************
Disordered Region (DISEMBL)
MTTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFS***********HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGYQEGEAAQFSF
Disordered Region (DISPRO)
****FDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGYQEG*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDHMLEYIPYDTIHATGNISRNLQDVPDLGLGFGYQEGEAAQFSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
Q6XP49	780	Zinc finger protein GLIS3	no	N/A	0.418	0.105	0.768	3e-32
Q8NEA6	775	Zinc finger protein GLIS3	no	N/A	0.418	0.105	0.768	4e-32
Q8NBF1	620	Zinc finger protein GLIS1	no	N/A	0.489	0.154	0.666	9e-32
Q8K1M4	789	Zinc finger protein GLIS1	no	N/A	0.382	0.095	0.756	1e-31
Q9BZE0	524	Zinc finger protein GLIS2	no	N/A	0.418	0.156	0.707	6e-29
Q98T94	492	Zinc finger protein GLIS2	N/A	N/A	0.418	0.166	0.707	1e-28
Q91660	1569	Zinc finger protein GLI3	N/A	N/A	0.403	0.050	0.725	1e-28
Q8VDL9	521	Zinc finger protein GLIS2	no	N/A	0.418	0.157	0.707	2e-28
P10070	1586	Zinc finger protein GLI2	no	N/A	0.443	0.054	0.688	2e-28
Q9IA31	1544	Transcriptional activator	no	N/A	0.403	0.051	0.725	2e-28

>sp|Q6XP49|GLIS3_MOUSE Zinc finger protein GLIS3 OS=Mus musculus GN=Glis3 PE=2 SV=2

 Score =  138 bits (347), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 67/82 (81%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct: 416 FEGCKKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 475

Query: 72  YKGCTKRYTDPSSLRKHAKNHN 93
             GCTKRYTDPSSLRKH K H+
Sbjct: 476 IPGCTKRYTDPSSLRKHVKAHS 497

Acts as both a repressor and activator of transcription. Binds to the consensus sequence 5'-GACCACCCAC-3'.
Mus musculus (taxid: 10090)

>sp|Q8NEA6|GLIS3_HUMAN Zinc finger protein GLIS3 OS=Homo sapiens GN=GLIS3 PE=2 SV=5

 Score =  137 bits (345), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 67/82 (81%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct: 416 FEGCEKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 475

Query: 72  YKGCTKRYTDPSSLRKHAKNHN 93
             GCTKRYTDPSSLRKH K H+
Sbjct: 476 IPGCTKRYTDPSSLRKHVKAHS 497

Acts as both a repressor and activator of transcription. Binds to the consensus sequence 5'-GACCACCCAC-3'.

Homo sapiens (taxid: 9606)

>sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens GN=GLIS1 PE=2 SV=2

 Score =  136 bits (342), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 75/99 (75%), Gaps = 3/99 (3%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F  C+KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct: 266 FEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 325

Query: 72  YKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKP 110
             GC+KRYTDPSSLRKH K H+       ++RK  +A P
Sbjct: 326 IPGCSKRYTDPSSLRKHVKAHSAKE---QQVRKKLHAGP 361

Acts as both a repressor and activator of transcription. Binds to the consensus sequence 5'-GACCACCCAC-3'.

Homo sapiens (taxid: 9606)

>sp|Q8K1M4|GLIS1_MOUSE Zinc finger protein GLIS1 OS=Mus musculus GN=Glis1 PE=2 SV=2

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 68/82 (82%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F  C+KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct: 437 FEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 496

Query: 72  YKGCTKRYTDPSSLRKHAKNHN 93
             GC+KRYTDPSSLRKH K H+
Sbjct: 497 IPGCSKRYTDPSSLRKHVKAHS 518

Acts as both a repressor and activator of transcription. Binds to the consensus sequence 5'-GACCACCCAC-3'.

Mus musculus (taxid: 10090)

>sp|Q9BZE0|GLIS2_HUMAN Zinc finger protein GLIS2 OS=Homo sapiens GN=GLIS2 PE=1 SV=2

 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 65/82 (79%)

Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
           P C+K+FSRLENLKIH RSHTGE+PY C YEGC+K +SNSSDR KH RTH+  +PY C  
Sbjct: 238 PTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKM 297

Query: 73  KGCTKRYTDPSSLRKHAKNHNH 94
            GC KRYTDPSSLRKH K H H
Sbjct: 298 PGCHKRYTDPSSLRKHIKAHGH 319

Can act either as a transcriptional repressor or as a transcriptional activator, depending on the cell context. Acts as a repressor of the Hedgehog signaling pathway (By similarity). Represses the Hedgehog-dependent expression of Wnt4 (By similarity). Necessary to maintain the differentiated epithelial phenotype in renal cells through the inhibition of SNAI1, which itself induces the epithelial-to-mesenchymal transition (By similarity). Represses transcriptional activation mediated by CTNNB1 in the Wnt signaling pathway. May act by recruiting the corepressors CTBP1 and HDAC3. May be involved in neuron differentiation.

Homo sapiens (taxid: 9606)

>sp|Q98T94|GLIS2_XENLA Zinc finger protein GLIS2 OS=Xenopus laevis GN=glis2 PE=2 SV=1

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 64/82 (78%)

Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
           P C K+FSRLENLKIH RSHTGE+PY C YEGC+K +SNSSDR KH RTH+  +PY C  
Sbjct: 228 PTCHKSFSRLENLKIHNRSHTGEKPYMCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKM 287

Query: 73  KGCTKRYTDPSSLRKHAKNHNH 94
            GC KRYTDPSSLRKH K H H
Sbjct: 288 PGCQKRYTDPSSLRKHIKAHGH 309

Can act either as a transcription repressor or as a transcription activator, depending on the cell context. May be involved in neuron differentiation.

Xenopus laevis (taxid: 8355)

>sp|Q91660|GLI3_XENLA Zinc finger protein GLI3 OS=Xenopus laevis GN=gli3 PE=2 SV=1

 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 66/80 (82%), Gaps = 1/80 (1%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTHFDTRPYKC 70
           F  C+KA+SRLENLK H RSHTGE+PY C +EGC+KAFSN+SDRAKHQ RTH + +PY C
Sbjct: 555 FEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVC 614

Query: 71  MYKGCTKRYTDPSSLRKHAK 90
              GCTKRYTDPSSLRKH K
Sbjct: 615 KIPGCTKRYTDPSSLRKHVK 634

Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and may play a role in limb development. May bind to the minimal GLI-consensus sequence 5'-GGGTGGTC-3' (By similarity). Has an essential role in the early embryonic patterning of mesoderm and neuroectoderm.

Xenopus laevis (taxid: 8355)

>sp|Q8VDL9|GLIS2_MOUSE Zinc finger protein GLIS2 OS=Mus musculus GN=Glis2 PE=1 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 64/82 (78%)

Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
           P C K+FSRLENLKIH RSHTGE+PY C YEGC+K +SNSSDR KH RTH+  +PY C  
Sbjct: 238 PTCNKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKM 297

Query: 73  KGCTKRYTDPSSLRKHAKNHNH 94
            GC KRYTDPSSLRKH K H H
Sbjct: 298 PGCHKRYTDPSSLRKHIKAHGH 319

Can act either as a transcriptional repressor or as a transcriptional activator, depending on the cell context. Acts as a repressor of the Hedgehog signaling pathway. Represses the Hedgehog-dependent expression of Wnt4. Necessary to maintain the differentiated epithelial phenotype in renal cells through the inhibition of SNAI1, which itself induces the epithelial-to-mesenchymal transition. Represses transcriptional activation by CTNNB1 in the Wnt signaling pathway. May act by recruiting the corepressors CTBP1 and HDAC3. May be involved in neuron differentiation.

Mus musculus (taxid: 10090)

>sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN=GLI2 PE=1 SV=4

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 3/90 (3%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTHFDTRPYKC 70
           F  C+KA+SRLENLK H RSHTGE+PY C +EGC+KAFSN+SDRAKHQ RTH + +PY C
Sbjct: 507 FEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYIC 566

Query: 71  MYKGCTKRYTDPSSLRKHAKN-HNHD-HLT 98
              GCTKRYTDPSSLRKH K  H  D H+T
Sbjct: 567 KIPGCTKRYTDPSSLRKHVKTVHGPDAHVT 596

Acts as a transcriptional activator. May play a role during embryogenesis. Binds to the DNA sequence 5'-GAACCACCCA-3' which is part of the TRE-2S regulatory element that augments the Tax-dependent enhancer of human T-cell leukemia virus type 1. Implicated in the transduction of SHH signal.

Homo sapiens (taxid: 9606)

>sp|Q9IA31|GLI3_CHICK Transcriptional activator GLI3 (Fragment) OS=Gallus gallus GN=GLI3 PE=1 SV=1

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 1/80 (1%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTHFDTRPYKC 70
           F  C KA+SRLENLK H RSHTGE+PY C +EGC+KAFSN+SDRAKHQ RTH + +PY C
Sbjct: 552 FEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVC 611

Query: 71  MYKGCTKRYTDPSSLRKHAK 90
              GCTKRYTDPSSLRKH K
Sbjct: 612 KIPGCTKRYTDPSSLRKHVK 631

Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
195399498	858	GJ14367 [Drosophila virilis] gi|19414191	0.673	0.153	0.571	3e-35
312383295	728	hypothetical protein AND_03617 [Anophele	0.459	0.123	0.768	6e-35
242017859	830	zinc finger protein transcription factor	0.469	0.110	0.760	1e-34
194743956	823	GF18275 [Drosophila ananassae] gi|190627	0.474	0.113	0.752	2e-34
198450729	919	GA18349 [Drosophila pseudoobscura pseudo	0.413	0.088	0.839	3e-34
195573042	741	GD18414 [Drosophila simulans] gi|1942004	0.413	0.109	0.839	3e-34
194910643	838	GG12470 [Drosophila erecta] gi|190656836	0.413	0.096	0.839	3e-34
195331195	834	GM23601 [Drosophila sechellia] gi|194121	0.413	0.097	0.839	4e-34
385719242	358	AT07919p1 [Drosophila melanogaster]	0.413	0.226	0.839	4e-34
195502765	842	GE23994 [Drosophila yakuba] gi|194184471	0.413	0.096	0.839	4e-34

>gi|195399498|ref|XP_002058356.1| GJ14367 [Drosophila virilis] gi|194141916|gb|EDW58324.1| GJ14367 [Drosophila virilis]

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/140 (57%), Positives = 92/140 (65%), Gaps = 8/140 (5%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 503 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 562

Query: 72  YKGCTKRYTDPSSLRKHAKNHNH-------DHLTPAKMRKLNYAKPGDIVPSVRNVNSSV 124
             GCTKRYTDPSSLRKH KNH           LTP+  + +   +  +   S+R    S 
Sbjct: 563 LPGCTKRYTDPSSLRKHVKNHGQMRRKSASGTLTPSTKKAVKTRRNSESAVSLREPLGSC 622

Query: 125 PLNPDFTVFSCGEPNLLMES 144
              P  +  SC E   LM++
Sbjct: 623 EQRPQRSS-SCSEAAHLMQN 641

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383295|gb|EFR28440.1| hypothetical protein AND_03617 [Anopheles darlingi]

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 80/95 (84%), Gaps = 5/95 (5%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY+C +EGC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 472 FPECDKAFSRLENLKIHQRSHTGERPYNCQFEGCTKAFSNSSDRAKHQRTHYDTKPYACQ 531

Query: 72  YKGCTKRYTDPSSLRKHAKNHNHDHLTPAK--MRK 104
             GCTKRYTDPSSLRKH KNH+   L PA+  MR+
Sbjct: 532 LPGCTKRYTDPSSLRKHVKNHS---LRPAEAPMRR 563

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017859|ref|XP_002429403.1| zinc finger protein transcription factor lame duck, putative [Pediculus humanus corporis] gi|212514322|gb|EEB16665.1| zinc finger protein transcription factor lame duck, putative [Pediculus humanus corporis]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 75/92 (81%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F  C KAFSRLENLKIHQRSHTGERPY+C YEGC KAFSNSSDRAKHQRTHFDT+PY C 
Sbjct: 647 FEGCTKAFSRLENLKIHQRSHTGERPYTCQYEGCTKAFSNSSDRAKHQRTHFDTKPYACQ 706

Query: 72  YKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR 103
             GCTKRYTDPSSLRKH KNH+      A+ +
Sbjct: 707 VIGCTKRYTDPSSLRKHIKNHSAKEQQQARRK 738

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194743956|ref|XP_001954464.1| GF18275 [Drosophila ananassae] gi|190627501|gb|EDV43025.1| GF18275 [Drosophila ananassae]

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/93 (75%), Positives = 75/93 (80%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 478 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 537

Query: 72  YKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRK 104
             GCTKRYTDPSSLRKH KNH   +     MR+
Sbjct: 538 LPGCTKRYTDPSSLRKHVKNHALRNANGQLMRR 570

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198450729|ref|XP_001358101.2| GA18349 [Drosophila pseudoobscura pseudoobscura] gi|198131165|gb|EAL27238.2| GA18349 [Drosophila pseudoobscura pseudoobscura]

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 522 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 581

Query: 72  YKGCTKRYTDPSSLRKHAKNH 92
             GCTKRYTDPSSLRKH KNH
Sbjct: 582 LPGCTKRYTDPSSLRKHVKNH 602

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195573042|ref|XP_002104504.1| GD18414 [Drosophila simulans] gi|194200431|gb|EDX14007.1| GD18414 [Drosophila simulans]

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 479 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 538

Query: 72  YKGCTKRYTDPSSLRKHAKNH 92
             GCTKRYTDPSSLRKH KNH
Sbjct: 539 LPGCTKRYTDPSSLRKHVKNH 559

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194910643|ref|XP_001982198.1| GG12470 [Drosophila erecta] gi|190656836|gb|EDV54068.1| GG12470 [Drosophila erecta]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 489 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 548

Query: 72  YKGCTKRYTDPSSLRKHAKNH 92
             GCTKRYTDPSSLRKH KNH
Sbjct: 549 LPGCTKRYTDPSSLRKHVKNH 569

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195331195|ref|XP_002032288.1| GM23601 [Drosophila sechellia] gi|194121231|gb|EDW43274.1| GM23601 [Drosophila sechellia]

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 479 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 538

Query: 72  YKGCTKRYTDPSSLRKHAKNH 92
             GCTKRYTDPSSLRKH KNH
Sbjct: 539 LPGCTKRYTDPSSLRKHVKNH 559

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|385719242|gb|AFI71919.1| AT07919p1 [Drosophila melanogaster]

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query: 12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
          FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 5  FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 64

Query: 72 YKGCTKRYTDPSSLRKHAKNH 92
            GCTKRYTDPSSLRKH KNH
Sbjct: 65 LPGCTKRYTDPSSLRKHVKNH 85

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195502765|ref|XP_002098370.1| GE23994 [Drosophila yakuba] gi|194184471|gb|EDW98082.1| GE23994 [Drosophila yakuba]

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct: 489 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 548

Query: 72  YKGCTKRYTDPSSLRKHAKNH 92
             GCTKRYTDPSSLRKH KNH
Sbjct: 549 LPGCTKRYTDPSSLRKHVKNH 569

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
FB|FBgn0039039	866	lmd "lame duck" [Drosophila me	0.413	0.093	0.839	7.4e-35
UNIPROTKB|F1SK39	359	GLIS3 "Uncharacterized protein	0.469	0.256	0.709	1.1e-32
ZFIN|ZDB-GENE-070912-8	518	glis1a "GLIS family zinc finge	0.418	0.158	0.768	1e-31
UNIPROTKB|J9P7P4	934	GLIS3 "Uncharacterized protein	0.479	0.100	0.697	1.1e-31
UNIPROTKB|Q8NBF1	620	GLIS1 "Zinc finger protein GLI	0.489	0.154	0.666	1.2e-31
MGI|MGI:2444289	780	Glis3 "GLIS family zinc finger	0.515	0.129	0.650	1.2e-31
UNIPROTKB|Q8NEA6	775	GLIS3 "Zinc finger protein GLI	0.428	0.108	0.752	1.6e-31
RGD|1565505	934	RGD1565505 "similar to Zinc fi	0.428	0.089	0.752	2.4e-31
RGD|1308030	708	Glis1 "GLIS family zinc finger	0.418	0.115	0.756	2.5e-31
UNIPROTKB|F1MXG5	709	GLIS1 "Uncharacterized protein	0.418	0.115	0.756	2.6e-31

FB|FBgn0039039 lmd "lame duck" [Drosophila melanogaster (taxid:7227)]

 Score = 387 (141.3 bits), Expect = 7.4e-35, P = 7.4e-35
 Identities = 68/81 (83%), Positives = 71/81 (87%)

Query:    12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
             FP C KAFSRLENLKIHQRSHTGERPY C Y+GC KAFSNSSDRAKHQRTH+DT+PY C 
Sbjct:   506 FPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQ 565

Query:    72 YKGCTKRYTDPSSLRKHAKNH 92
               GCTKRYTDPSSLRKH KNH
Sbjct:   566 LPGCTKRYTDPSSLRKHVKNH 586

GO:0007525 "somatic muscle development" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0007519 "skeletal muscle tissue development" evidence=IMP

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IMP;IDA

GO:0007517 "muscle organ development" evidence=IMP;TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0007520 "myoblast fusion" evidence=IMP

UNIPROTKB|F1SK39 GLIS3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 66/93 (70%), Positives = 71/93 (76%)

Query:    12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
             F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct:     1 FEGCKKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 60

Query:    72 YKGCTKRYTDPSSLRKHAKNHNH-DHLTPAKMR 103
               GCTKRYTDPSSLRKH K H+  D     K+R
Sbjct:    61 IPGCTKRYTDPSSLRKHVKAHSSKDQQARKKLR 93

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-070912-8 glis1a "GLIS family zinc finger 1a" [Danio rerio (taxid:7955)]

 Score = 349 (127.9 bits), Expect = 1.0e-31, P = 1.0e-31
 Identities = 63/82 (76%), Positives = 67/82 (81%)

Query:    12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
             F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct:   198 FEGCNKAFSRLENLKIHLRSHTGEKPYICQHPGCLKAFSNSSDRAKHQRTHLDTKPYACQ 257

Query:    72 YKGCTKRYTDPSSLRKHAKNHN 93
               GCTKRYTDPSSLRKH K H+
Sbjct:   258 LPGCTKRYTDPSSLRKHVKVHS 279

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|J9P7P4 GLIS3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 358 (131.1 bits), Expect = 1.1e-31, P = 1.1e-31
 Identities = 67/96 (69%), Positives = 73/96 (76%)

Query:     9 CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             C+ F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY
Sbjct:   572 CT-FEGCKKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPY 630

Query:    69 KCMYKGCTKRYTDPSSLRKHAKNHNH-DHLTPAKMR 103
              C   GCTKRYTDPSSLRKH K H+  D     K+R
Sbjct:   631 ACQIPGCTKRYTDPSSLRKHVKAHSSKDQQARKKLR 666

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q8NBF1 GLIS1 "Zinc finger protein GLIS1" [Homo sapiens (taxid:9606)]

 Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
 Identities = 66/99 (66%), Positives = 75/99 (75%)

Query:    12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
             F  C+KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct:   266 FEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 325

Query:    72 YKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKP 110
               GC+KRYTDPSSLRKH K H+       ++RK  +A P
Sbjct:   326 IPGCSKRYTDPSSLRKHVKAHSAKE---QQVRKKLHAGP 361

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

MGI|MGI:2444289 Glis3 "GLIS family zinc finger 3" [Mus musculus (taxid:10090)]

 Score = 356 (130.4 bits), Expect = 1.2e-31, P = 1.2e-31
 Identities = 67/103 (65%), Positives = 74/103 (71%)

Query:     9 CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             C+ F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY
Sbjct:   414 CT-FEGCKKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPY 472

Query:    69 KCMYKGCTKRYTDPSSLRKHAKNHN-HDHLTPAKMRKLNYAKP 110
              C   GCTKRYTDPSSLRKH K H+  +     K+R      P
Sbjct:   473 ACQIPGCTKRYTDPSSLRKHVKAHSSREQQARKKLRSSTELHP 515

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0044428 "nuclear part" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q8NEA6 GLIS3 "Zinc finger protein GLIS3" [Homo sapiens (taxid:9606)]

 Score = 355 (130.0 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 64/85 (75%), Positives = 69/85 (81%)

Query:     9 CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             C+ F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY
Sbjct:   414 CT-FEGCEKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPY 472

Query:    69 KCMYKGCTKRYTDPSSLRKHAKNHN 93
              C   GCTKRYTDPSSLRKH K H+
Sbjct:   473 ACQIPGCTKRYTDPSSLRKHVKAHS 497

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0044428 "nuclear part" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

RGD|1565505 RGD1565505 "similar to Zinc finger protein GLIS3 (GLI-similar 3)" [Rattus norvegicus (taxid:10116)]

 Score = 355 (130.0 bits), Expect = 2.4e-31, P = 2.4e-31
 Identities = 64/85 (75%), Positives = 69/85 (81%)

Query:     9 CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             C+ F  C KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY
Sbjct:   569 CT-FEGCKKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPY 627

Query:    69 KCMYKGCTKRYTDPSSLRKHAKNHN 93
              C   GCTKRYTDPSSLRKH K H+
Sbjct:   628 ACQIPGCTKRYTDPSSLRKHVKAHS 652

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1308030 Glis1 "GLIS family zinc finger 1" [Rattus norvegicus (taxid:10116)]

 Score = 352 (129.0 bits), Expect = 2.5e-31, P = 2.5e-31
 Identities = 62/82 (75%), Positives = 68/82 (82%)

Query:    12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
             F  C+KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct:   356 FEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 415

Query:    72 YKGCTKRYTDPSSLRKHAKNHN 93
               GC+KRYTDPSSLRKH K H+
Sbjct:   416 IPGCSKRYTDPSSLRKHVKAHS 437

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|F1MXG5 GLIS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 352 (129.0 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 62/82 (75%), Positives = 68/82 (82%)

Query:    12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
             F  C+KAFSRLENLKIH RSHTGE+PY C + GC KAFSNSSDRAKHQRTH DT+PY C 
Sbjct:   355 FEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 414

Query:    72 YKGCTKRYTDPSSLRKHAKNHN 93
               GC+KRYTDPSSLRKH K H+
Sbjct:   415 IPGCSKRYTDPSSLRKHVKAHS 436

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34708	TRA1_CAEEL	No assigned EC number	0.5841	0.5	0.0882	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	196
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	7e-05
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	1e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	9e-04
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.002

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 42.4 bits (99), Expect = 7e-05
 Identities = 27/58 (46%), Positives = 36/58 (62%)

Query: 5  FDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
                  P+C  +FSRLE+L  H RSHTGE+P  C+Y GC K+FS   + ++H RTH
Sbjct: 29 NAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTH 86

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 6/118 (5%)

Query: 15  CAKAFSRLENLKIHQRS--HTGE--RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
           C  +FSR   L  H RS  H+GE  +P+SC Y  C K FS +    +H   H    P K 
Sbjct: 295 CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE 354

Query: 71  MYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNP 128
                + +++   +         +  L     +K        I    R+ N S+ +  
Sbjct: 355 KLLNSSSKFSPLLNNEPPQSLQQYKDLKN--DKKSETLSNSCIRNFKRDSNLSLHIIT 410

Length = 467

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.1 bits (81), Expect = 9e-04
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSN 51
          NL+ H R+HTGE+PY C    C K+FS+
Sbjct: 1  NLRRHMRTHTGEKPYKCPV--CGKSFSS 26

Length = 26

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 22/81 (27%)

Query: 34  GERPYSCTYEGCHKAFSNSS-------------------DRAKHQRTHFDTRPYKCMYKG 74
             +PY C  EGC+K + N +                      K        +PY+C    
Sbjct: 346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV-- 403

Query: 75  CTKRYTDPSSLRKHAKNHNHD 95
           C KRY + + L+ H K H+HD
Sbjct: 404 CDKRYKNLNGLKYHRK-HSHD 423

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
KOG2462|consensus	279		99.94
KOG2462|consensus	279		99.92
KOG1074|consensus	958		99.84
KOG3576|consensus	267		99.73
KOG1074|consensus	958		99.71
KOG3608|consensus	467		99.67
KOG3576|consensus	267		99.64
KOG3623|consensus	1007		99.63
KOG3608|consensus	467		99.59
KOG3623|consensus	1007		99.55
PLN03086	567	PRLI-interacting factor K; Provisional	99.22
PHA00733	128	hypothetical protein	99.12
PHA00733	128	hypothetical protein	99.02
PHA02768	55	hypothetical protein; Provisional	98.96
PHA02768	55	hypothetical protein; Provisional	98.94
PLN03086	567	PRLI-interacting factor K; Provisional	98.85
KOG3993|consensus	500		98.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.67
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.62
PHA00616	44	hypothetical protein	98.35
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.27
PHA00616	44	hypothetical protein	98.27
PHA00732	79	hypothetical protein	98.24
KOG3993|consensus	500		98.19
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.14
PHA00732	79	hypothetical protein	97.99
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.9
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.88
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.79
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.77
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.75
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.53
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.53
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.5
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.27
smart00355	26	ZnF_C2H2 zinc finger.	97.06
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.97
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.91
smart00355	26	ZnF_C2H2 zinc finger.	96.5
KOG1146|consensus	1406		96.5
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.36
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.29
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.1
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.1
COG5048	467	FOG: Zn-finger [General function prediction only]	96.02
KOG1146|consensus	1406		95.95
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.88
PRK04860	160	hypothetical protein; Provisional	95.69
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.46
PRK04860	160	hypothetical protein; Provisional	95.15
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.91
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.91
KOG2482|consensus	423		94.1
KOG2231|consensus	669		94.06
KOG2893|consensus	341		93.9
COG5048	467	FOG: Zn-finger [General function prediction only]	92.82
KOG2893|consensus	341		92.56
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.44
KOG4124|consensus	442		92.39
KOG2231|consensus	669		92.39
KOG2785|consensus	390		92.26
KOG4173|consensus	253		91.83
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.8
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.01
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.85
KOG4173|consensus	253		88.79
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.89
COG4049	65	Uncharacterized protein containing archaeal-type C	83.99
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	83.75
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	82.07
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	80.51
KOG4377|consensus	480		80.43

>KOG2462|consensus

Probab=99.94  E-value=9.4e-28  Score=178.19  Aligned_cols=129  Identities=22%  Similarity=0.458  Sum_probs=114.6

Q ss_pred             CCcChhccCCHHHHHHHHHhhCC---CCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHH
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTG---ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKH   88 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   88 (196)
                      |+.|||.+.+.++|.+|..+|..   .+.+.|++  |++.|.+...|+.|+++|.  .+++|.+  |||.|.+...|+-|
T Consensus       133 c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  133 CPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGH  206 (279)
T ss_pred             ccccccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcc
Confidence            55799999999999999999864   56789965  9999999999999999986  6889988  99999999999999


Q ss_pred             hhhcCCCCCCccccccccCCCCCCccccccccCCCCCCCCCcccccCCCcccccccchhhee
Q psy9954          89 AKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTV  150 (196)
Q Consensus        89 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~h~~  150 (196)
                      +|+|+|+|||.|..|++.|..+++|+.||.+|...+.    +.|..|++.|..+.-|..|..
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~----~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK----HQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc----ccCcchhhHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999988776    488889998888887777754

>KOG2462|consensus

Probab=99.92  E-value=8e-27  Score=173.28  Aligned_cols=103  Identities=29%  Similarity=0.497  Sum_probs=98.5

Q ss_pred             CCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhh
Q psy9954          11 QFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      +|++|||.|.+.-.|+.|+|+|.  -+++|.+  ||+.|.+..-|+.|+|+|+|||||.|+.  |+|.|.++++|+.||+
T Consensus       163 ~C~~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  163 SCKYCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQ  236 (279)
T ss_pred             cCCCCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHHHHHH
Confidence            57799999999999999999997  6799977  9999999999999999999999999988  9999999999999999


Q ss_pred             hcCCCCCCccccccccCCCCCCccccccc
Q psy9954          91 NHNHDHLTPAKMRKLNYAKPGDIVPSVRN  119 (196)
Q Consensus        91 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  119 (196)
                      +|.+.|.|+|..|++.|...+.|.+|...
T Consensus       237 THS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  237 THSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999999999863

>KOG1074|consensus

Probab=99.84  E-value=9e-22  Score=164.34  Aligned_cols=86  Identities=16%  Similarity=0.297  Sum_probs=78.1

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCCCCCCCcccc---cCCCcccccc
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVF---SCGEPNLLME  143 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~---~c~~~~~~~~  143 (196)
                      |-.|.+  |.++..-++.|+.|.|+|+++++|+|.+|++.|.++++|+.|+..|-..-+....+.|.   .|.+.|....
T Consensus       605 PNqCii--C~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  605 PNQCII--CLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             ccceee--eeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            689999  99999999999999999999999999999999999999999999988777766667777   8899999999


Q ss_pred             cchhheeeccc
Q psy9954         144 SYELQTVTHDH  154 (196)
Q Consensus       144 ~~~~h~~~~~~  154 (196)
                      .+..|.+.|..
T Consensus       683 ~lpQhIriH~~  693 (958)
T KOG1074|consen  683 TLPQHIRIHLG  693 (958)
T ss_pred             cccceEEeecC
Confidence            99999887753

>KOG3576|consensus

Probab=99.73  E-value=2e-19  Score=128.18  Aligned_cols=113  Identities=29%  Similarity=0.528  Sum_probs=96.3

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSL   85 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (196)
                      .|.|.   +|+|.|.-..-|.+|++-|...+.|-|..  ||+.|...-+|++|+++|+|.+||+|..  |++.|..+-.|
T Consensus       117 ~ftCr---vCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsl  189 (267)
T KOG3576|consen  117 SFTCR---VCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSL  189 (267)
T ss_pred             eeeee---hhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccH
Confidence            45566   89999998888999999999888899977  9999999999999999999999999988  99999999999


Q ss_pred             HHHhhhcCC-----------CCCCccccccccCCCCCCccccccccCCCCC
Q psy9954          86 RKHAKNHNH-----------DHLTPAKMRKLNYAKPGDIVPSVRNVNSSVP  125 (196)
Q Consensus        86 ~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  125 (196)
                      ..|.+.-++           .+.|.|..||++-.+...+..|++.+|...+
T Consensus       190 eshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  190 ESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            999865443           4568899999999999999999988887654

>KOG1074|consensus

Probab=99.71  E-value=3.3e-18  Score=143.28  Aligned_cols=51  Identities=35%  Similarity=0.698  Sum_probs=48.6

Q ss_pred             CCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcC
Q psy9954          11 QFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHF   63 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   63 (196)
                      ||-+|-+...-++.|+.|.|+|+|++||+|++  ||++|.++.+|+.||.+|.
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHk  657 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHK  657 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccc
Confidence            57799999999999999999999999999988  9999999999999999886

>KOG3608|consensus

Probab=99.67  E-value=1.3e-17  Score=127.92  Aligned_cols=137  Identities=19%  Similarity=0.422  Sum_probs=94.0

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHH--cCCCCceeeccCccCccCCChH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT--HFDTRPYKCMYKGCTKRYTDPS   83 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~   83 (196)
                      .+.|. +..|-+.|.+++.|++|+++|+++|...|+.  ||..|.++..|..|.+.  -....+|.|..  |.|.|.+..
T Consensus       177 v~~C~-W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~--Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~--C~KrFaTek  251 (467)
T KOG3608|consen  177 VTMCN-WAMCTKHMGNKYRLREHIRTHSNEKVVACPH--CGELFRTKTKLFDHLRRQTELNTNSFQCAQ--CFKRFATEK  251 (467)
T ss_pred             eeecc-chhhhhhhccHHHHHHHHHhcCCCeEEecch--HHHHhccccHHHHHHHhhhhhcCCchHHHH--HHHHHhHHH
Confidence            35687 8899999999999999999999999999965  99999999999999764  33345677766  777777777


Q ss_pred             HHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCCCCCCCcccccCCCcccccccchhheeec
Q psy9954          84 SLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTH  152 (196)
Q Consensus        84 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~h~~~~  152 (196)
                      .|..|+..|-  .-|+|+.|+++...+++|..|++..|+.   +..++|..|+..+.....|..|...|
T Consensus       252 lL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~---dkpfKCd~Cd~~c~~esdL~kH~~~H  315 (467)
T KOG3608|consen  252 LLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSK---DKPFKCDECDTRCVRESDLAKHVQVH  315 (467)
T ss_pred             HHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhcc---CCCccccchhhhhccHHHHHHHHHhc
Confidence            7776666553  3456666666666666666666644433   12234444444444444444444433

>KOG3576|consensus

Probab=99.64  E-value=1.1e-17  Score=119.30  Aligned_cols=117  Identities=18%  Similarity=0.374  Sum_probs=99.6

Q ss_pred             CCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcc
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIV  114 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  114 (196)
                      ...|.|.+  |++.|..+.-|.+|++-|...+.|-|.+  ||+.|.+-..|++|+|+|++.++|+|..|++.|..+-+|.
T Consensus       115 ~d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  115 QDSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCeeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHH
Confidence            44699987  9999999999999999999999999988  9999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCC-------CCCCcccccCCCcccccccchhheeecccc
Q psy9954         115 PSVRNVNSSVP-------LNPDFTVFSCGEPNLLMESYELQTVTHDHM  155 (196)
Q Consensus       115 ~H~~~~~~~~~-------~~~~~~~~~c~~~~~~~~~~~~h~~~~~~~  155 (196)
                      .|++..|+...       ....+.|..||......+.+..|...++..
T Consensus       191 shl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  191 SHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            99999887532       122345666676666677777777666443

>KOG3623|consensus

Probab=99.63  E-value=1.4e-16  Score=131.92  Aligned_cols=105  Identities=24%  Similarity=0.497  Sum_probs=93.9

Q ss_pred             CCCcChhccCCHHHHHHHHHh-hC-CCCceeecccccccccccchhHHHHHHHcCC-------------CCceeeccCcc
Q psy9954          11 QFPHCAKAFSRLENLKIHQRS-HT-GERPYSCTYEGCHKAFSNSSDRAKHQRTHFD-------------TRPYKCMYKGC   75 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~-h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~~~C   75 (196)
                      +|++|.+.+.+...|+.|++. |. .+..|.|..  |.++|.....|.+||..|..             .+.|+|..  |
T Consensus       212 tcpycdrgykrltslkeHikyrhekne~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtE--C  287 (1007)
T KOG3623|consen  212 TCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTE--C  287 (1007)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchh--hhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccc--c
Confidence            578999999999999999875 43 344699966  99999999999999998752             25699977  9


Q ss_pred             CccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccc
Q psy9954          76 TKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRN  119 (196)
Q Consensus        76 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  119 (196)
                      +|.|..+..|+.|+|+|.|+|+|.|+.|++.|...+++..||..
T Consensus       288 gKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  288 GKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             chhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            99999999999999999999999999999999999999999963

>KOG3608|consensus

Probab=99.59  E-value=1.8e-16  Score=121.66  Aligned_cols=111  Identities=21%  Similarity=0.408  Sum_probs=64.0

Q ss_pred             CCCCCcChhccCCHHHHHHHHHh-hCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHH
Q psy9954           9 CSQFPHCAKAFSRLENLKIHQRS-HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRK   87 (196)
Q Consensus         9 C~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   87 (196)
                      |.+||.|..+....+.|..||+. |...+||+|  ++|.+.|.+..+|.+|..+|. +..|.|.+++|...|.+...+++
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKC--d~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~  339 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKC--DECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRR  339 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhccCCCccc--cchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHH
Confidence            44555566666666666666554 555566666  336666666666666665555 44566665556666666666666


Q ss_pred             HhhhcC-C--CCCCccccccccCCCCCCccccccccCC
Q psy9954          88 HAKNHN-H--DHLTPAKMRKLNYAKPGDIVPSVRNVNS  122 (196)
Q Consensus        88 H~~~h~-~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~  122 (196)
                      |++.++ +  .-+|.|..|++.|.+-.+|..|+...|+
T Consensus       340 H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  340 HFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            655443 2  2345666666666666666666655554

>KOG3623|consensus

Probab=99.55  E-value=1e-15  Score=126.88  Aligned_cols=79  Identities=35%  Similarity=0.796  Sum_probs=55.4

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHH
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSS   84 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   84 (196)
                      ..|.|++   |.|+|...+.|.+|.--|+|.+||+|.+  |.++|+.+-.|..|+|.|.|+|||.|+.  |+|+|.....
T Consensus       893 gmyaCDq---CDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCdK--ClKRFSHSGS  965 (1007)
T KOG3623|consen  893 GMYACDQ---CDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCDK--CLKRFSHSGS  965 (1007)
T ss_pred             ccchHHH---HHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhhh--hhhhcccccc
Confidence            4566663   7777777777777777777777777755  7777777777777777777777777755  7777777777


Q ss_pred             HHHHhh
Q psy9954          85 LRKHAK   90 (196)
Q Consensus        85 l~~H~~   90 (196)
                      +.+||.
T Consensus       966 YSQHMN  971 (1007)
T KOG3623|consen  966 YSQHMN  971 (1007)
T ss_pred             hHhhhc
Confidence            777764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.22  E-value=1.3e-11  Score=102.50  Aligned_cols=99  Identities=15%  Similarity=0.311  Sum_probs=59.5

Q ss_pred             CCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCC----------C
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYT----------D   81 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~----------~   81 (196)
                      |+.|++.|. ...|..|+++|+  +++.|  + |++.+ ....|..|+.+|.+.+++.|++  |++.|.          .
T Consensus       456 C~~Cgk~f~-~s~LekH~~~~H--kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        456 CEKCGQAFQ-QGEMEKHMKVFH--EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             CCCCCCccc-hHHHHHHHHhcC--CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchhhh
Confidence            445666664 456666766653  56666  4 66544 4466666666666666777766  766664          1


Q ss_pred             hHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccC
Q psy9954          82 PSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVN  121 (196)
Q Consensus        82 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  121 (196)
                      .+.|..|+.. .+.+++.|..|++.+..+ +|..|+...|
T Consensus       527 ~s~Lt~HE~~-CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        527 LRGMSEHESI-CGSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhHHHHHHh-cCCcceEccccCCeeeeh-hHHHHHHHhh
Confidence            3456666665 366666676676655544 4555554444

>PHA00733 hypothetical protein

Probab=99.12  E-value=1.6e-11  Score=84.13  Aligned_cols=83  Identities=13%  Similarity=0.223  Sum_probs=66.5

Q ss_pred             CCCceeecccccccccccchhHHHH--HH---HcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCC
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKH--QR---THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYA  108 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  108 (196)
                      ..+++.|.+  |...|.....|..+  ++   .+.+.+||.|+.  |++.|.....|..|++.+  ..+|.|..|++.|.
T Consensus        37 ~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~  110 (128)
T PHA00733         37 EQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFR  110 (128)
T ss_pred             hhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCCCCCccC
Confidence            356789976  98888777766665  22   234578999977  999999999999999876  45689999999999


Q ss_pred             CCCCccccccccCC
Q psy9954         109 KPGDIVPSVRNVNS  122 (196)
Q Consensus       109 ~~~~l~~H~~~~~~  122 (196)
                      ....|..|+...|+
T Consensus       111 ~~~sL~~H~~~~h~  124 (128)
T PHA00733        111 NTDSTLDHVCKKHN  124 (128)
T ss_pred             CHHHHHHHHHHhcC
Confidence            99999999987775

>PHA00733 hypothetical protein

Probab=99.02  E-value=2.4e-10  Score=78.35  Aligned_cols=82  Identities=18%  Similarity=0.292  Sum_probs=67.1

Q ss_pred             ccccCCCCCcChhccCCHHHHHHH--HH---hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIH--QR---SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRY   79 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H--~~---~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   79 (196)
                      +++.|.   +|.+.|.....|..+  ++   .+.+.++|.|..  |++.|.....|..|++.+  +.+|.|..  |++.|
T Consensus        39 ~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F  109 (128)
T PHA00733         39 KRLIRA---VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEF  109 (128)
T ss_pred             hhHHHH---HHhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCC--CCCcc
Confidence            456666   799999888877666  22   234578999955  999999999999999976  45799988  99999


Q ss_pred             CChHHHHHHhhhcCCC
Q psy9954          80 TDPSSLRKHAKNHNHD   95 (196)
Q Consensus        80 ~~~~~l~~H~~~h~~~   95 (196)
                      .....|..|+...++.
T Consensus       110 ~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        110 RNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCHHHHHHHHHHhcCc
Confidence            9999999999877654

>PHA02768 hypothetical protein; Provisional

Probab=98.96  E-value=4.6e-10  Score=64.19  Aligned_cols=45  Identities=22%  Similarity=0.380  Sum_probs=35.2

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccc
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVP  115 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  115 (196)
                      .|+|+.  ||+.|...++|..|+++|+  ++++|..|++.|...+.|..
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            478876  8888888888888888877  57788888888887776653

>PHA02768 hypothetical protein; Provisional

Probab=98.94  E-value=4.6e-10  Score=64.17  Aligned_cols=44  Identities=14%  Similarity=0.433  Sum_probs=30.3

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRA   56 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   56 (196)
                      .|.|.   .||+.|.+.++|..||++|.  ++|+|.  +|++.|...+.|.
T Consensus         5 ~y~C~---~CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECP---ICGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTGEYI   48 (55)
T ss_pred             ccCcc---hhCCeeccHHHHHHHHHhcC--CcccCC--cccceecccceeE
Confidence            35454   57888888888888887777  577774  4777777665553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.85  E-value=1.4e-09  Score=90.67  Aligned_cols=94  Identities=18%  Similarity=0.299  Sum_probs=73.6

Q ss_pred             CceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCC------
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAK------  109 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~------  109 (196)
                      +.+.|+.  |++.|. ...|..|+..++  +++.|  + |++.+ .+..|..|+.+|...+++.|..|++.+..      
T Consensus       452 ~H~~C~~--Cgk~f~-~s~LekH~~~~H--kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d  522 (567)
T PLN03086        452 NHVHCEK--CGQAFQ-QGEMEKHMKVFH--EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMD  522 (567)
T ss_pred             cCccCCC--CCCccc-hHHHHHHHHhcC--CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccc
Confidence            3468965  999996 688999999875  78999  4 99755 67999999999999999999999999952      


Q ss_pred             ----CCCccccccccCCCCCCCCCcccccCCCcccccc
Q psy9954         110 ----PGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLME  143 (196)
Q Consensus       110 ----~~~l~~H~~~~~~~~~~~~~~~~~~c~~~~~~~~  143 (196)
                          ...|..|.... +..+    ..|..|+..+.+.+
T Consensus       523 ~~d~~s~Lt~HE~~C-G~rt----~~C~~Cgk~Vrlrd  555 (567)
T PLN03086        523 VRDRLRGMSEHESIC-GSRT----APCDSCGRSVMLKE  555 (567)
T ss_pred             hhhhhhhHHHHHHhc-CCcc----eEccccCCeeeehh
Confidence                23678887763 4444    47788887766544

>KOG3993|consensus

Probab=98.68  E-value=2.8e-09  Score=84.32  Aligned_cols=84  Identities=29%  Similarity=0.572  Sum_probs=68.3

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCC------------------
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFD------------------   64 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------------   64 (196)
                      -|.+|+|.   .|-..|.+.-.|.+|.-.-.-..-|+|  ++|++.|.-..+|..|.|+|-.                  
T Consensus       264 ~iGdyiCq---LCK~kYeD~F~LAQHrC~RIV~vEYrC--PEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~  338 (500)
T KOG3993|consen  264 VIGDYICQ---LCKEKYEDAFALAQHRCPRIVHVEYRC--PECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVET  338 (500)
T ss_pred             cHHHHHHH---HHHHhhhhHHHHhhccCCeeEEeeecC--CcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhh
Confidence            35678888   899999999999999643222235999  6799999999999999998741                  


Q ss_pred             ---------------CCceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          65 ---------------TRPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        65 ---------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                                     +..|.|..  |++.|.+...|+.|+.+|+
T Consensus       339 rae~~ea~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  339 RAEVQEAERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhccccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhh
Confidence                           12499988  9999999999999988876

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.67  E-value=2.1e-08  Score=49.03  Aligned_cols=24  Identities=63%  Similarity=1.323  Sum_probs=14.5

Q ss_pred             HHHHHHhhCCCCceeecccccccccc
Q psy9954          25 LKIHQRSHTGERPYSCTYEGCHKAFS   50 (196)
Q Consensus        25 L~~H~~~h~~~~~~~C~~~~C~~~f~   50 (196)
                      |..||++|++++||.|+.  |++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             HHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            556666666666666643  666654

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.62  E-value=2.7e-08  Score=48.64  Aligned_cols=25  Identities=44%  Similarity=1.016  Sum_probs=17.4

Q ss_pred             hHHHHHHHcCCCCceeeccCccCccCC
Q psy9954          54 DRAKHQRTHFDTRPYKCMYKGCTKRYT   80 (196)
Q Consensus        54 ~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (196)
                      +|.+|+++|.+++||+|+.  |++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            3667777777777777766  777665

...

>PHA00616 hypothetical protein

Probab=98.35  E-value=2.9e-07  Score=50.17  Aligned_cols=31  Identities=16%  Similarity=0.262  Sum_probs=24.3

Q ss_pred             CCcChhccCCHHHHHHHHHhhCCCCceeecc
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTY   42 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~   42 (196)
                      |+.||+.|...+.|..|++.|++++++.|+.
T Consensus         4 C~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          4 CLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             cchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            3368888888888888888888888887753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.27  E-value=4.7e-07  Score=69.50  Aligned_cols=54  Identities=24%  Similarity=0.527  Sum_probs=40.2

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhh-c------------------CCCCCCccccccccCCCCCCcccccc
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKN-H------------------NHDHLTPAKMRKLNYAKPGDIVPSVR  118 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~  118 (196)
                      +|||+|++.+|.|.+.....|+.|+.- |                  ..+|||.|++|++.|+.-..|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            366666666666666666666666642 2                  13589999999999999999999986

>PHA00616 hypothetical protein

Probab=98.27  E-value=3.5e-07  Score=49.87  Aligned_cols=27  Identities=11%  Similarity=0.193  Sum_probs=13.6

Q ss_pred             cccccccchhHHHHHHHcCCCCceeec
Q psy9954          45 CHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        45 C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      ||+.|..+.+|.+|++.|++++++.|+
T Consensus         7 CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          7 CGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             hhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            555555555555555555555554443

>PHA00732 hypothetical protein

Probab=98.24  E-value=9.6e-07  Score=55.18  Aligned_cols=45  Identities=22%  Similarity=0.390  Sum_probs=25.2

Q ss_pred             ceeeccCccCccCCChHHHHHHhhh-cCCCCCCccccccccCCCCCCccccccc
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKN-HNHDHLTPAKMRKLNYAKPGDIVPSVRN  119 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~  119 (196)
                      ||.|..  |++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|++.
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            355655  66666666666666653 33   235666666665   35555543

>KOG3993|consensus

Probab=98.19  E-value=2.4e-07  Score=73.61  Aligned_cols=83  Identities=16%  Similarity=0.365  Sum_probs=69.1

Q ss_pred             eeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCC-----------------------
Q psy9954          38 YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH-----------------------   94 (196)
Q Consensus        38 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------   94 (196)
                      |.|..  |...|...-.|.+|.-.-....-|+|+.  |+|.|.-..+|..|.|+|..                       
T Consensus       268 yiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  268 YICQL--CKEKYEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHHH--HHHhhhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            89977  9999999999999975433344599977  99999999999999999862                       


Q ss_pred             ----------CCCCccccccccCCCCCCccccccccCCCC
Q psy9954          95 ----------DHLTPAKMRKLNYAKPGDIVPSVRNVNSSV  124 (196)
Q Consensus        95 ----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  124 (196)
                                +..|.|..|++.|.+...|+.|...|+...
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                      113889999999999999999988887543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.14  E-value=6.7e-07  Score=68.69  Aligned_cols=55  Identities=36%  Similarity=0.827  Sum_probs=47.3

Q ss_pred             CCCceeecccccccccccchhHHHHHHH-cC------------------CCCceeeccCccCccCCChHHHHHHhh
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQRT-HF------------------DTRPYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      ++|||+|++++|.+.++.+..|+.|+.. |.                  ..|||.|++  |+|++.....|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            3589999999999999999999999874 31                  348999999  9999999999999965

>PHA00732 hypothetical protein

Probab=97.99  E-value=4.1e-06  Score=52.32  Aligned_cols=47  Identities=30%  Similarity=0.537  Sum_probs=33.8

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHh-hCCCCceeecccccccccccchhHHHHHHHcC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRS-HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHF   63 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   63 (196)
                      ||.|.   .|++.|.+...|+.|++. |.+   +.|+.  |++.|.   .+..|+.+..
T Consensus         1 py~C~---~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~--CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCP---ICGFTTVTLFALKQHARRNHTL---TKCPV--CNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCC---CCCCccCCHHHHHHHhhcccCC---CccCC--CCCEeC---ChhhhhcccC
Confidence            45565   688888888888888874 543   57844  888887   4777876543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.90  E-value=9.7e-06  Score=52.94  Aligned_cols=74  Identities=20%  Similarity=0.465  Sum_probs=21.9

Q ss_pred             CCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhh
Q psy9954          11 QFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      ||.+|+..|.+...|..||...++-.. .     ....+.....+..+++.-. ...+.|..  |++.|.+...|..|++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~-~-----~~~~l~~~~~~~~~~~~~~-~~~~~C~~--C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI-P-----DQKYLVDPNRLLNYLRKKV-KESFRCPY--CNKTFRSREALQEHMR   71 (100)
T ss_dssp             -------------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHH
T ss_pred             Ccccccccccccccccccccccccccc-c-----ccccccccccccccccccc-CCCCCCCc--cCCCCcCHHHHHHHHc
Confidence            578999999999999999976443221 1     1112223344444443222 23699988  9999999999999998


Q ss_pred             hcC
Q psy9954          91 NHN   93 (196)
Q Consensus        91 ~h~   93 (196)
                      .+.
T Consensus        72 ~~~   74 (100)
T PF12756_consen   72 SKH   74 (100)
T ss_dssp             HTT
T ss_pred             Ccc
Confidence            653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.88  E-value=2.5e-05  Score=45.20  Aligned_cols=46  Identities=22%  Similarity=0.411  Sum_probs=25.4

Q ss_pred             CCcChhccCCHHHHHHHHHh-hCCC-CceeecccccccccccchhHHHHHHHc
Q psy9954          12 FPHCAKAFSRLENLKIHQRS-HTGE-RPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      ||+|++ ..+...|..|... |..+ +.+.|++  |...+.  .+|..|+..+
T Consensus         5 CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    5 CPYCGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHh
Confidence            446777 3445666666554 4432 3566755  665433  3666666543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.79  E-value=1.5e-05  Score=37.57  Aligned_cols=22  Identities=36%  Similarity=0.910  Sum_probs=13.1

Q ss_pred             eeeccCccCccCCChHHHHHHhhh
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |.|+.  |++.|.+...|.+|++.
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhH
Confidence            45654  66666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.77  E-value=1e-05  Score=46.83  Aligned_cols=48  Identities=27%  Similarity=0.605  Sum_probs=24.2

Q ss_pred             eeecccccccccccchhHHHHHHH-cCCC-CceeeccCccCccCCChHHHHHHhhhc
Q psy9954          38 YSCTYEGCHKAFSNSSDRAKHQRT-HFDT-RPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        38 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      |.|++  |++. .+...|..|... |..+ +.+.|++  |...+.  .+|..|+..+
T Consensus         3 f~CP~--C~~~-~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPY--CGKG-FSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCC--CCCc-cCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHh
Confidence            55655  6663 334556666443 3332 3466655  655433  2555665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.75  E-value=2e-05  Score=37.08  Aligned_cols=20  Identities=55%  Similarity=0.881  Sum_probs=13.6

Q ss_pred             CcChhccCCHHHHHHHHHhh
Q psy9954          13 PHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus        13 ~~C~k~f~~~~~L~~H~~~h   32 (196)
                      ++|++.|.++..|..|++.|
T Consensus         4 ~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    4 PICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             TTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHhHC
Confidence            35777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.53  E-value=8.4e-05  Score=35.02  Aligned_cols=22  Identities=36%  Similarity=0.730  Sum_probs=17.4

Q ss_pred             CCcChhccCCHHHHHHHHHhhC
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      |++|++.|.+...|+.|+++|+
T Consensus         3 C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    3 CPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             -SSTS-EESSHHHHHHHHHHHS
T ss_pred             CcCCCCcCCcHHHHHHHHHhhC
Confidence            4579999999999999998763

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.53  E-value=6.4e-05  Score=35.45  Aligned_cols=23  Identities=35%  Similarity=0.873  Sum_probs=13.5

Q ss_pred             eeeccCccCccCCChHHHHHHhhhc
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      |.|+.  |++.|.+...|..|+++|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            45655  666666666666666654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.50  E-value=8.8e-05  Score=36.31  Aligned_cols=25  Identities=36%  Similarity=0.860  Sum_probs=18.0

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      ||+|..  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            467766  7777777777777777664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.27  E-value=0.00015  Score=35.42  Aligned_cols=24  Identities=50%  Similarity=0.960  Sum_probs=14.7

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHHhhC
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      |.|.   .|++.|.+...|..|++.|.
T Consensus         2 ~~C~---~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECD---ECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEET---TTTEEESSHHHHHHHHCTTT
T ss_pred             CCCC---ccCCccCChhHHHHHhHHhc
Confidence            4455   46666666666666666553

>smart00355 ZnF_C2H2 zinc finger

Probab=97.06  E-value=0.00074  Score=32.14  Aligned_cols=22  Identities=41%  Similarity=0.687  Sum_probs=18.3

Q ss_pred             CCcChhccCCHHHHHHHHHhhC
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      |+.|++.|.....|..|++.|.
T Consensus         3 C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        3 CPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCcchhCCHHHHHHHHHHhc
Confidence            4579999999999999988764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.97  E-value=0.00082  Score=37.59  Aligned_cols=26  Identities=23%  Similarity=0.445  Sum_probs=19.2

Q ss_pred             CCcChhccCCHHHHHHHHHhhCCCCc
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTGERP   37 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~~~~   37 (196)
                      ||+|+..+.+..+|++|+..+++.+|
T Consensus        27 CP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   27 CPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             -TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCcchhhccchhhHHHHHHHHhcccC
Confidence            66899999999999999988777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.91  E-value=6.5e-05  Score=48.97  Aligned_cols=74  Identities=15%  Similarity=0.270  Sum_probs=21.1

Q ss_pred             eecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcccccc
Q psy9954          39 SCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVR  118 (196)
Q Consensus        39 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  118 (196)
                      +|.+  |+..|.....|..|+...++... .     ....+.....+..+.+.. -...+.|..|+..|.+...|..|++
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~-~-----~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDI-P-----DQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             ---------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             Cccc--ccccccccccccccccccccccc-c-----cccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHc
Confidence            4766  99999999999999876443221 1     111223444444444322 1236889999999999999999998


Q ss_pred             ccC
Q psy9954         119 NVN  121 (196)
Q Consensus       119 ~~~  121 (196)
                      .+.
T Consensus        72 ~~~   74 (100)
T PF12756_consen   72 SKH   74 (100)
T ss_dssp             HTT
T ss_pred             Ccc
Confidence            653

>smart00355 ZnF_C2H2 zinc finger

Probab=96.50  E-value=0.0018  Score=30.70  Aligned_cols=23  Identities=35%  Similarity=0.859  Sum_probs=17.2

Q ss_pred             eeeccCccCccCCChHHHHHHhhhc
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      |.|..  |++.|.....|..|++.|
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHh
Confidence            46766  888888888888887755

>KOG1146|consensus

Probab=96.50  E-value=0.0076  Score=55.10  Aligned_cols=25  Identities=0%  Similarity=-0.130  Sum_probs=18.5

Q ss_pred             CCccccccccCCCCCCccccccccC
Q psy9954          97 LTPAKMRKLNYAKPGDIVPSVRNVN  121 (196)
Q Consensus        97 ~~~C~~C~~~f~~~~~l~~H~~~~~  121 (196)
                      .+.|.+|++.-.-..+|+.|+...+
T Consensus       589 ~~~C~vc~yetniarnlrihmtss~  613 (1406)
T KOG1146|consen  589 SWRCEVCSYETNIARNLRIHMTASP  613 (1406)
T ss_pred             CcchhhhcchhhhhhccccccccCC
Confidence            3678888888888888888886443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.36  E-value=0.0038  Score=34.96  Aligned_cols=30  Identities=20%  Similarity=0.465  Sum_probs=14.3

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      +.|-.|+.  |+..+....+|++|+...|..+
T Consensus        22 ~~PatCP~--C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   22 EQPATCPI--CGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             S--EE-TT--T--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCCc--chhhccchhhHHHHHHHHhccc
Confidence            44556655  6666666666666665555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.29  E-value=0.0022  Score=30.25  Aligned_cols=23  Identities=39%  Similarity=0.805  Sum_probs=12.8

Q ss_pred             eeeccCccCccCCChHHHHHHhhhcC
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      |+|+.  |++... ...|.+|++.++
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            55655  666665 666666666543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.10  E-value=0.0059  Score=29.21  Aligned_cols=20  Identities=25%  Similarity=0.640  Sum_probs=14.8

Q ss_pred             CCCcChhccCCHHHHHHHHHh
Q psy9954          11 QFPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~   31 (196)
                      +|+.||+.| ....|..|+..
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            467888888 67778888653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.10  E-value=0.0041  Score=29.58  Aligned_cols=22  Identities=32%  Similarity=0.819  Sum_probs=15.0

Q ss_pred             eeeccCccCccCCChHHHHHHhhh
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |.|..  |++.|.+...|..|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            56666  77777777777777654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.02  E-value=0.0041  Score=50.85  Aligned_cols=115  Identities=23%  Similarity=0.365  Sum_probs=71.5

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHH--hhCCC--CceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQR--SHTGE--RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTD   81 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~--~h~~~--~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (196)
                      ++.|.   .|...|.....|..|.+  .|.++  +++.|++..|++.|.+...+..|...|.+..++.+....+.+.+..
T Consensus       289 ~~~~~---~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (467)
T COG5048         289 PIKSK---QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSP  365 (467)
T ss_pred             CCCCc---cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccc
Confidence            45555   58888888888888888  78888  8888862248888888888888888888777777765445555444


Q ss_pred             hHHHH-----HHhhhcCCCCCCccc--cccccCCCCCCccccccccCCC
Q psy9954          82 PSSLR-----KHAKNHNHDHLTPAK--MRKLNYAKPGDIVPSVRNVNSS  123 (196)
Q Consensus        82 ~~~l~-----~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~  123 (196)
                      ...-.     .....-.....+.+.  .|...+.+...+..|...+-..
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (467)
T COG5048         366 LLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSF  414 (467)
T ss_pred             ccCCCCccchhhccCccCCccccccccchhhhhcccccccccccccccc
Confidence            33311     111111222233332  3555555555555555544433

>KOG1146|consensus

Probab=95.95  E-value=0.0032  Score=57.37  Aligned_cols=111  Identities=17%  Similarity=0.337  Sum_probs=75.8

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHh-hC------------------------CCCceeecccccccccccchhHHH
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRS-HT------------------------GERPYSCTYEGCHKAFSNSSDRAK   57 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~-h~------------------------~~~~~~C~~~~C~~~f~~~~~l~~   57 (196)
                      .++.|.|.   .|+..|+....|..|||. |.                        +.++|.|..  |...+..+.+|..
T Consensus       462 ~~kt~~cp---kc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~--C~~stttng~Lsi  536 (1406)
T KOG1146|consen  462 FFKTLKCP---KCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRA--CNYSTTTNGNLSI  536 (1406)
T ss_pred             ccccccCC---ccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCccccee--eeeeeecchHHHH
Confidence            34555666   588888888888888887 22                        135688855  8888888888888


Q ss_pred             HHHH--cC-----------------------------------C------CCceeeccCccCccCCChHHHHHHhhhc-C
Q psy9954          58 HQRT--HF-----------------------------------D------TRPYKCMYKGCTKRYTDPSSLRKHAKNH-N   93 (196)
Q Consensus        58 H~~~--h~-----------------------------------~------~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~   93 (196)
                      |+..  |.                                   +      +..|.|..  |++--.-..+|+.||..- +
T Consensus       537 hlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~v--c~yetniarnlrihmtss~~  614 (1406)
T KOG1146|consen  537 HLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEV--CSYETNIARNLRIHMTASPS  614 (1406)
T ss_pred             HHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhh--hcchhhhhhccccccccCCC
Confidence            8753  11                                   0      11478877  888877788888888643 3


Q ss_pred             CCCCCccccccccCCCCCCcccccccc
Q psy9954          94 HDHLTPAKMRKLNYAKPGDIVPSVRNV  120 (196)
Q Consensus        94 ~~~~~~C~~C~~~f~~~~~l~~H~~~~  120 (196)
                      -..+--+..++..+.....+..+.+.+
T Consensus       615 s~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  615 SSPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             CCChHHHhhhcchhhccccccCcCCCC
Confidence            333366777777777777777666654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.88  E-value=0.0051  Score=29.22  Aligned_cols=19  Identities=42%  Similarity=0.644  Sum_probs=12.7

Q ss_pred             CcChhccCCHHHHHHHHHh
Q psy9954          13 PHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        13 ~~C~k~f~~~~~L~~H~~~   31 (196)
                      .+|++.|.+...|+.|++.
T Consensus         4 ~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    4 DICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             TTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCcCCHHHHHHHHCc
Confidence            3677777777777777654

>PRK04860 hypothetical protein; Provisional

Probab=95.69  E-value=0.0068  Score=43.21  Aligned_cols=40  Identities=18%  Similarity=0.460  Sum_probs=32.7

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGD  112 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  112 (196)
                      +|.|.   |+.   ....+.+|.++|.++++|.|..|+..|.....
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEecc
Confidence            68883   887   77788999999999999999999988765543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.46  E-value=0.003  Score=30.76  Aligned_cols=22  Identities=45%  Similarity=0.809  Sum_probs=17.5

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHHh
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~~   31 (196)
                      |.|.   +|++.|.+...|..|+++
T Consensus         2 ~~C~---~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCD---ACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBT---TTTBBBSSHHHHHCCTTS
T ss_pred             CCcc---cCCCCcCCHHHHHHHHcc
Confidence            4455   799999999999888765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.15  E-value=0.019  Score=40.98  Aligned_cols=38  Identities=24%  Similarity=0.613  Sum_probs=31.9

Q ss_pred             ceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCCh
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDP   82 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (196)
                      +|.|  . |+.   ....+.+|.++|.++++|.|..  |+..|...
T Consensus       119 ~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~--C~~~l~~~  156 (160)
T PRK04860        119 PYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRR--CGETLVFK  156 (160)
T ss_pred             EEEc--C-CCC---eeCHHHHHHHHhcCCccEECCC--CCceeEEe
Confidence            5899  4 886   6778899999999999999977  99888654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.91  E-value=0.022  Score=26.67  Aligned_cols=18  Identities=44%  Similarity=0.689  Sum_probs=10.5

Q ss_pred             cChhccCCHHHHHHHHHhh
Q psy9954          14 HCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~h   32 (196)
                      .|+.... ...|..|++.|
T Consensus         5 ~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    5 HCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             SSS-EES-HHHHHHHHHHH
T ss_pred             CCCCcCC-HHHHHHHHHhh
Confidence            4666665 66666666654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.91  E-value=0.0097  Score=28.92  Aligned_cols=22  Identities=27%  Similarity=0.720  Sum_probs=14.3

Q ss_pred             eeeccCccCccCCChHHHHHHhhh
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |.|..  |++.|.+...|..|+++
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            45655  77777777777666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=94.10  E-value=0.11  Score=41.11  Aligned_cols=105  Identities=23%  Similarity=0.351  Sum_probs=65.2

Q ss_pred             CCcChhccCCHHHHHHHHHh--hCCCCc--------eeecccccccccccchhHHHHH--HHc--C-------------C
Q psy9954          12 FPHCAKAFSRLENLKIHQRS--HTGERP--------YSCTYEGCHKAFSNSSDRAKHQ--RTH--F-------------D   64 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~--h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~--~~h--~-------------~   64 (196)
                      |-.|.+.|+.+..|+.|||.  |....|        |.-.+.+-|++..   ....+.  .+.  .             +
T Consensus       198 CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t---~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  198 CLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWT---IVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             eeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccc---hhhhhhhhhhhccccccccchhhhhcCC
Confidence            44899999999999999986  543222        3322222233221   111111  110  0             1


Q ss_pred             CCc--eeeccCccCccCCChHHHHHHhhhcCCC---------------------------CCCccccccccCCCCCCccc
Q psy9954          65 TRP--YKCMYKGCTKRYTDPSSLRKHAKNHNHD---------------------------HLTPAKMRKLNYAKPGDIVP  115 (196)
Q Consensus        65 ~~~--~~C~~~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~  115 (196)
                      ..+  ..|-+  |....-....|..||+.-|.-                           +.-.|..|...|..+..|..
T Consensus       275 a~a~~v~CLf--C~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~  352 (423)
T KOG2482|consen  275 AEALSVVCLF--CTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLI  352 (423)
T ss_pred             CCccceEEEe--eccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhh
Confidence            122  69999  999888899999999865521                           11347788888888888888


Q ss_pred             cccccC
Q psy9954         116 SVRNVN  121 (196)
Q Consensus       116 H~~~~~  121 (196)
                      ||..+.
T Consensus       353 hm~e~k  358 (423)
T KOG2482|consen  353 HMVEDK  358 (423)
T ss_pred             hccccc
Confidence            886443

>KOG2231|consensus

Probab=94.06  E-value=0.052  Score=46.92  Aligned_cols=96  Identities=22%  Similarity=0.310  Sum_probs=61.2

Q ss_pred             hccCCHHHHHHHHHh-hCCCCceeecc--------cccccccccchhHHHHHHHc-CCCC----ceeeccCccCccCCCh
Q psy9954          17 KAFSRLENLKIHQRS-HTGERPYSCTY--------EGCHKAFSNSSDRAKHQRTH-FDTR----PYKCMYKGCTKRYTDP   82 (196)
Q Consensus        17 k~f~~~~~L~~H~~~-h~~~~~~~C~~--------~~C~~~f~~~~~l~~H~~~h-~~~~----~~~C~~~~C~~~f~~~   82 (196)
                      ..|.....|+.|++. |..   +.|..        .-+.+ .-+...|..|+..- .+++    .-.|.+  |...|...
T Consensus       122 ~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k-~Yt~~el~~h~~~gd~d~~s~rGhp~C~~--C~~~fld~  195 (669)
T KOG2231|consen  122 TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERK-LYTRAELNLHLMFGDPDDESCRGHPLCKF--CHERFLDD  195 (669)
T ss_pred             cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeee-hehHHHHHHHHhcCCCccccccCCccchh--hhhhhccH
Confidence            344478899999964 543   33322        00233 33456778887642 1121    247877  99999999


Q ss_pred             HHHHHHhhhcCCCCCCccccc------cccCCCCCCccccccccCC
Q psy9954          83 SSLRKHAKNHNHDHLTPAKMR------KLNYAKPGDIVPSVRNVNS  122 (196)
Q Consensus        83 ~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~~~  122 (196)
                      ..|.+|++.++    |-|..|      +..|..-..|..|-+..|-
T Consensus       196 ~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  196 DELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             HHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            99999998755    334444      4566777788888887773

>KOG2893|consensus

Probab=93.90  E-value=0.033  Score=41.77  Aligned_cols=51  Identities=18%  Similarity=0.402  Sum_probs=37.9

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSS  123 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  123 (196)
                      ++| |=+  |++.|.+...|.+|++.    +-|+|.+|.+...+--.|..|-..+|.+
T Consensus        10 kpw-cwy--cnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   10 KPW-CWY--CNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             Cce-eee--cccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhhh
Confidence            443 556  88888888888888764    4588888888887777788777666643

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.82  E-value=0.049  Score=44.51  Aligned_cols=64  Identities=28%  Similarity=0.558  Sum_probs=48.1

Q ss_pred             ceeecccccccccccchhHHHHHH--HcCCC--CceeeccCccCccCCChHHHHHHhhhcCCCCCCcccc
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQR--THFDT--RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKM  102 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  102 (196)
                      ++.|.  .|...|.....|.+|.+  .|.++  +++.|++..|++.|.+...+..|...|.+...+.+..
T Consensus       289 ~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         289 PIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             CCCCc--cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            56674  48888888888888888  68888  7888872238888888888888888888777666654

>KOG2893|consensus

Probab=92.56  E-value=0.048  Score=40.90  Aligned_cols=41  Identities=24%  Similarity=0.510  Sum_probs=26.0

Q ss_pred             CCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHH
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKH   58 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   58 (196)
                      |.+|++.|....-|.+|++.    +-|+|-+  |-+...+--.|..|
T Consensus        13 cwycnrefddekiliqhqka----khfkchi--chkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHI--CHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeee--ehhhhccCCCceee
Confidence            45777777777777777664    3377766  76655555555555

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.44  E-value=0.055  Score=42.81  Aligned_cols=106  Identities=21%  Similarity=0.483  Sum_probs=65.4

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeeccccccc---------ccccchhHHHHHHHcCCC---C-ceeec
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHK---------AFSNSSDRAKHQRTHFDT---R-PYKCM   71 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~---------~f~~~~~l~~H~~~h~~~---~-~~~C~   71 (196)
                      ..|.|.+ ..|......+..|+.|.+.-++  .+-|.+  |-.         ..-++..|..|...-..+   + .-.|.
T Consensus       150 L~F~CP~-skc~~~C~~~k~lk~H~K~~H~--~~~C~~--C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~  224 (493)
T COG5236         150 LSFKCPK-SKCHRRCGSLKELKKHYKAQHG--FVLCSE--CIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCI  224 (493)
T ss_pred             HHhcCCc-hhhhhhhhhHHHHHHHHHhhcC--cEEhHh--hhcCcccCccceeeeecccccccccCCccccCcCCCchhh
Confidence            3456652 3466666678889999887443  245533  421         233455666676542222   1 24788


Q ss_pred             cCccCccCCChHHHHHHhhhcCCCCCCcccccccc-------CCCCCCccccccccC
Q psy9954          72 YKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLN-------YAKPGDIVPSVRNVN  121 (196)
Q Consensus        72 ~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~~  121 (196)
                      +  |...|-+...|..|+|..|.    .|.+|++.       |++-.+|..|.+.-|
T Consensus       225 F--C~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         225 F--CKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             h--ccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            8  99999999999999986542    36666553       555566677766433

>KOG4124|consensus

Probab=92.39  E-value=0.052  Score=42.96  Aligned_cols=54  Identities=19%  Similarity=0.390  Sum_probs=33.1

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcC-------------------CCCCCccccccccCCCCCCcccccc
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHN-------------------HDHLTPAKMRKLNYAKPGDIVPSVR  118 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  118 (196)
                      .++|+|+.+.|.+.+.....|+.|...-|                   ..|+|.|++|.+.++.-..|..|+-
T Consensus       347 ~~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l~~~~~  419 (442)
T KOG4124|consen  347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRT  419 (442)
T ss_pred             cCCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCCCCceee
Confidence            35678877778888777777777754322                   1345666666666655555554443

>KOG2231|consensus

Probab=92.39  E-value=0.39  Score=41.78  Aligned_cols=67  Identities=21%  Similarity=0.447  Sum_probs=44.9

Q ss_pred             CHHHHHHHHHhhC-CCC----ceeecccccccccccchhHHHHHHHcCCCCceeecc----CccCccCCChHHHHHHhhh
Q psy9954          21 RLENLKIHQRSHT-GER----PYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY----KGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        21 ~~~~L~~H~~~h~-~~~----~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----~~C~~~f~~~~~l~~H~~~   91 (196)
                      +...|..|++.-. +++    --.|..  |...|.....|.+|++.++    |.|.+    ++++.-|.....|..|.+.
T Consensus       161 t~~el~~h~~~gd~d~~s~rGhp~C~~--C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  161 TRAELNLHLMFGDPDDESCRGHPLCKF--CHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             hHHHHHHHHhcCCCccccccCCccchh--hhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhh
Confidence            4556777776522 222    135766  8889999999999988654    45555    1135567788899999887


Q ss_pred             cC
Q psy9954          92 HN   93 (196)
Q Consensus        92 h~   93 (196)
                      +|
T Consensus       235 ~H  236 (669)
T KOG2231|consen  235 GH  236 (669)
T ss_pred             cC
Confidence            65

>KOG2785|consensus

Probab=92.26  E-value=0.26  Score=39.57  Aligned_cols=22  Identities=23%  Similarity=0.593  Sum_probs=13.2

Q ss_pred             ceeecccccccccccchhHHHHHH
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQR   60 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~   60 (196)
                      ++.|.+  |.+.|.....-..|+.
T Consensus        68 ~~~c~~--c~k~~~s~~a~~~hl~   89 (390)
T KOG2785|consen   68 VVYCEA--CNKSFASPKAHENHLK   89 (390)
T ss_pred             ceehHH--hhccccChhhHHHHHH
Confidence            456644  6666666666665554

>KOG4173|consensus

Probab=91.83  E-value=0.028  Score=41.11  Aligned_cols=80  Identities=15%  Similarity=0.360  Sum_probs=50.0

Q ss_pred             ceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcC----------CCCCCccc--ccc
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHN----------HDHLTPAK--MRK  104 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~----------~~~~~~C~--~C~  104 (196)
                      .|.|++-+|-+.|...+....|..+-++.   .|.+  |.+.|.+...|..|+..-|          +.-.|+|-  .|.
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            36676666777777666666666543333   6766  7777777777777764222          33446664  477


Q ss_pred             ccCCCCCCccccccccC
Q psy9954         105 LNYAKPGDIVPSVRNVN  121 (196)
Q Consensus       105 ~~f~~~~~l~~H~~~~~  121 (196)
                      ..|.+...-..|+...|
T Consensus       154 ~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhHHHHhc
Confidence            77777766667766555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.80  E-value=0.18  Score=25.78  Aligned_cols=23  Identities=30%  Similarity=0.638  Sum_probs=18.3

Q ss_pred             ceeeccCccCccCCChHHHHHHhhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      +|.|+.  |++.|.+...+..|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            577877  88888888888888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.01  E-value=0.19  Score=25.73  Aligned_cols=23  Identities=22%  Similarity=0.583  Sum_probs=16.3

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHh
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~   31 (196)
                      +|.|.   +|++.|.+...+..|++.
T Consensus         3 ~~~C~---~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCK---LCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEcc---ccCCccCCHHHHHHHHCh
Confidence            35555   788888878788777654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.85  E-value=0.047  Score=43.15  Aligned_cols=81  Identities=17%  Similarity=0.352  Sum_probs=57.1

Q ss_pred             eeecccccccccccchhHHHHHHHcCCCCceeeccCcc---CccC------CChHHHHHHhhhcCCCC----CCcccccc
Q psy9954          38 YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGC---TKRY------TDPSSLRKHAKNHNHDH----LTPAKMRK  104 (196)
Q Consensus        38 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C---~~~f------~~~~~l~~H~~~h~~~~----~~~C~~C~  104 (196)
                      |.|+...|.........|+.|.+..++  .+-|..  |   .+.|      -+.+.|..|...-..+.    -..|..|.
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~--C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSE--CIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHh--hhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            788877788877778889999887443  245544  4   2222      34567777765433222    24699999


Q ss_pred             ccCCCCCCccccccccCC
Q psy9954         105 LNYAKPGDIVPSVRNVNS  122 (196)
Q Consensus       105 ~~f~~~~~l~~H~~~~~~  122 (196)
                      ..|..-+.|..|++..|.
T Consensus       228 ~~FYdDDEL~~HcR~~HE  245 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE  245 (493)
T ss_pred             ceecChHHHHHHHHhhhh
Confidence            999999999999997774

>KOG4173|consensus

Probab=88.79  E-value=0.19  Score=36.97  Aligned_cols=81  Identities=26%  Similarity=0.646  Sum_probs=62.9

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHH-c---------CCCCceeeccCcc
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT-H---------FDTRPYKCMYKGC   75 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C~~~~C   75 (196)
                      .|.|. -.-|-..|........|-.+-++   -.|..  |.+.|.+.--|..|+.. |         .|..-|.|-..+|
T Consensus        79 ~~~cq-vagc~~~~d~lD~~E~hY~~~h~---~sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   79 AFACQ-VAGCCQVFDALDDYEHHYHTLHG---NSCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             ccccc-ccchHHHHhhhhhHHHhhhhccc---chhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            35565 45688899888888888766443   36866  99999999999999764 3         2445699999999


Q ss_pred             CccCCChHHHHHHhh-hc
Q psy9954          76 TKRYTDPSSLRKHAK-NH   92 (196)
Q Consensus        76 ~~~f~~~~~l~~H~~-~h   92 (196)
                      +..|.+....+.|+- +|
T Consensus       153 t~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhhHHHHhc
Confidence            999999999999975 44

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.89  E-value=0.7  Score=22.16  Aligned_cols=19  Identities=21%  Similarity=0.345  Sum_probs=13.8

Q ss_pred             CCCcChhccCCHHHHHHHHH
Q psy9954          11 QFPHCAKAFSRLENLKIHQR   30 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~   30 (196)
                      +||+|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            477888888 5567777765

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.99  E-value=0.41  Score=27.36  Aligned_cols=26  Identities=12%  Similarity=0.333  Sum_probs=15.8

Q ss_pred             CCCceeeccCccCccCCChHHHHHHhhh
Q psy9954          64 DTRPYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        64 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |+.-+.|+.  |+..|.+..++.+|...
T Consensus        14 GE~~lrCPR--C~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPR--CGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCc--hhHHHHHhHHHHHHhhH
Confidence            455566655  66666666666666544

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=83.75  E-value=3.1  Score=27.50  Aligned_cols=25  Identities=24%  Similarity=0.527  Sum_probs=18.8

Q ss_pred             eee----ccCccCccCCChHHHHHHhhhcCC
Q psy9954          68 YKC----MYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        68 ~~C----~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |.|    ..  |++.+.+...+.+|.+.+|+
T Consensus        81 ~~C~~~~~~--C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPH--CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCC--CCcEeccHHHHHHHHHHhcC
Confidence            777    66  88888888888888776653

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=82.07  E-value=0.99  Score=22.93  Aligned_cols=7  Identities=29%  Similarity=0.828  Sum_probs=3.3

Q ss_pred             Cceeecc
Q psy9954          66 RPYKCMY   72 (196)
Q Consensus        66 ~~~~C~~   72 (196)
                      .++.|+.
T Consensus        16 ~~~~CP~   22 (33)
T cd00350          16 APWVCPV   22 (33)
T ss_pred             CCCcCcC
Confidence            3445544

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=80.51  E-value=3.4  Score=27.28  Aligned_cols=27  Identities=22%  Similarity=0.364  Sum_probs=21.4

Q ss_pred             eee--cccccccccccchhHHHHHHHcCC
Q psy9954          38 YSC--TYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus        38 ~~C--~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      |.|  ..+.|++.+.+...+.+|++.+++
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            788  223399999999999999987653

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4377|consensus

Probab=80.43  E-value=2.4  Score=34.66  Aligned_cols=71  Identities=20%  Similarity=0.275  Sum_probs=43.0

Q ss_pred             ceeecccccccccccchhHHHHHHHcCCCC------------ceeeccCccCccCCChHHHHHHhhhcCCCC-------C
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFDTR------------PYKCMYKGCTKRYTDPSSLRKHAKNHNHDH-------L   97 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~------------~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~-------~   97 (196)
                      -|.|--+.|++.+..+.++.+|...|....            .|-|....|.+   .-++...|...|+...       -
T Consensus       271 hyhcl~e~C~ykr~~k~DvirH~~~hkkrdnsL~dgf~rfs~syhC~~~~C~k---sTsdV~~h~nFht~~~n~Gfrrth  347 (480)
T KOG4377|consen  271 HYHCLNEYCFYKRGQKNDVIRHVEIHKKRDNSLIDGFHRFSNSYHCTGQICEK---STSDVLLHDNFHTDKRNNGFRRTH  347 (480)
T ss_pred             hhcccCccccccccchhhhHHHHHHHhhcccccccchhhcCccchhhhcccCc---ccccccccCccccccccCceecce
Confidence            466665668877777888888877664321            36777666777   3344455655554321       2


Q ss_pred             CccccccccCCCC
Q psy9954          98 TPAKMRKLNYAKP  110 (196)
Q Consensus        98 ~~C~~C~~~f~~~  110 (196)
                      |.|..|+.++..+
T Consensus       348 fhC~r~gCTdtfK  360 (480)
T KOG4377|consen  348 FHCQRIGCTDTFK  360 (480)
T ss_pred             eEEeccCCccccc
Confidence            5677777554444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-26
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		4e-14
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-14
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-13
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-13
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-12
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-11
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-09
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-09
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-09
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		3e-09
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		1e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-09
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		2e-07
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		2e-07
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-05
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		3e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		5e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		8e-04

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTHFDTRPYKC 70
           F  C K++SRLENLK H RSHTGE+PY C +EGC KAFSN+SDRAKHQ RTH + +PY C
Sbjct: 72  FEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC 131
Query: 71  MYKGCTKRYTDPSSLRKHAK 90
              GCTKRYTDPSSLRKH K
Sbjct: 132 KLPGCTKRYTDPSSLRKHVK 151

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
           FP C K F+R ENLKIH+R+HTGE+P+ C +EGC + F+NSSDR KH   H
Sbjct: 95  FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 13 PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
          P C K+FS+  NL+ HQR+HTGE+PY C    C K+FS SSD  KHQRTH   +PYKC  
Sbjct: 8  PECGKSFSQSSNLQKHQRTHTGEKPYKCPE--CGKSFSQSSDLQKHQRTHTGEKPYKCPE 65
Query: 73 KGCTKRYTDPSSLRKHAKNHN 93
            C K ++    L +H + H 
Sbjct: 66 --CGKSFSRSDHLSRHQRTHQ 84

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
           P C K+FSR ++L  HQR+HTGE+PY C    C K+FS+  D  +HQRTH   +PYKC  
Sbjct: 25  PECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE 82
Query: 73  KGCTKRYTDPSSLRKHAKNH 92
             C K ++  ++LR H + H
Sbjct: 83  --CGKSFSQRANLRAHQRTH 100

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 13 PH--CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
          PH  C K F     ++ H  +H G R + C    C KAF  SS   +HQ  H   +P++C
Sbjct: 9  PHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 71 MYKGCTKRYTDPSSLRKHAKNHNHD 95
           ++GC KR++   +LR H + H  D
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGD 90

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
          F+C+ +P C K + +L +L++H R HTGE+PY C ++ C + FS S    +HQR H   +
Sbjct: 7  FMCA-YPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 67 PYKCMYKGCTKRYTDPSSLRKHAKNH 92
          P++C  K C ++++    L+ H + H
Sbjct: 66 PFQC--KTCQRKFSRSDHLKTHTRTH 89

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
          +P C K +++  +LK H R+HTGE+PY CT+EGC   F+ S +  +H R H   +P++C 
Sbjct: 20 YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG 79
Query: 72 YKGCTKRYTDPSSLRKHAKNHN 93
             C + ++    L  H K H 
Sbjct: 80 V--CNRSFSRSDHLALHMKRHQ 99

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
          ++CS F  C  A+++   L+ H   HTGE+P+ C  EGC K F++     +H  TH   +
Sbjct: 4  YICS-FADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 62
Query: 67 PYKCMYKGCTKRYTDPSSLRKH 88
           + C   GC  R+T  ++++KH
Sbjct: 63 NFTCDSDGCDLRFTTKANMKKH 84

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C K +++  +LK H R+HTGE+PY C ++GC   F+ S +  +H R H   RP++C  + 
Sbjct: 14 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC--QK 71
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C + ++    L  H K H
Sbjct: 72 CDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C K +++  +LK H R+HTGE+PY C ++GC   F+ S +  +H R H   RP++C  + 
Sbjct: 13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC--QK 70
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C + ++    L  H K H
Sbjct: 71 CDRAFSRSDHLALHMKRH 88

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 4  IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          I   +CS  P C K + +  +LK H R+HTGE+P+SC+++GC + F+ S + ++H+RTH
Sbjct: 15 IRSHICSH-PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          R + C++ GC K +  SS    H RTH   +P+ C +KGC +R+     L +H + H
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
          ++CS F  C  A+++   L+ H   HTGE+P+ C  EGC K F++     +H  TH   +
Sbjct: 13 YICS-FADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71
Query: 67 PYKCMYKGCTKRYTDPSSLRKH 88
           + C   GC  R+T  ++++KH
Sbjct: 72 NFTCDSDGCDLRFTTKANMKKH 93

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 10 SQFPH----CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT 65
          S  PH    C K FSR + LK H R HTG +PY C  + C  A ++SS   KH R H D 
Sbjct: 5  SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDE 62
Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD 95
          RP+KC    C     + S L  H ++H  D
Sbjct: 63 RPFKCQI--CPYASRNSSQLTVHLRSHTGD 90

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          F +C KAF +   LK+HQ SHT + PY C +EGC K FS  S   +H++ H
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          F +C KAF +   LK+HQ SHT + PY C +EGC K FS  S   +H++ H
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          C KAFSR   L  HQR HTGE+PY C    C KAFS +S    HQR H
Sbjct: 20 CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIH 65

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 6  DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT 65
          +F+C     C + F++  NL IH+R+HT ERPY+C  + CHKAF        H+  H   
Sbjct: 17 EFICK---FCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKE 71
Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          +P+KC  + C K +    +L  H   H
Sbjct: 72 KPFKC--QECGKGFCQSRTLAVHKTLH 96

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C K+F R   L  H   H+  RPY C Y  C K F   SD  KH   H   +P+KC    
Sbjct: 7  CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQV-- 62
Query: 75 CTKRYTDPSSLRKHAKNHN 93
          C K ++  S+L  H++ H 
Sbjct: 63 CGKAFSQSSNLITHSRKHT 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FSR + L  H R HTG++P+ C    C + FS S     H RTH   +P+ C    
Sbjct: 12 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++      ++H K H
Sbjct: 68 CGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FSR + L  H R HTG++P+ C    C + FS S     H RTH   +P+ C    
Sbjct: 11 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI-- 66
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++      ++H K H
Sbjct: 67 CGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FSR + L  H R HTG++P+ C    C + FS S     H RTH   +P+ C    
Sbjct: 12 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++      ++H K H
Sbjct: 68 CGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FSR  +L  H R HTG++P+ C    C + FS S     H RTH   +P+ C    
Sbjct: 12 CDRRFSRSADLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++      ++H K H
Sbjct: 68 CGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FSR   L  H R HTG++P+ C    C + FS S     H RTH   +P+ C    
Sbjct: 12 CDRRFSRSAELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++      ++H K H
Sbjct: 68 CGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FS   NL  H R HTG++P+ C    C + FS S     H RTH   +P+ C    
Sbjct: 12 CDRRFSDSSNLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++      ++H K H
Sbjct: 68 CGRKFARSDERKRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FS+  NL  H R HTG++P+ C    C + FS  +    H RTH   +P+ C    
Sbjct: 12 CDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQQASLNAHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++    +  +H K H
Sbjct: 68 CGRKFATLHTRTRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
          C + FS+  NL  H R HTG++P+ C    C + FS  +   +H RTH   +P+ C    
Sbjct: 12 CDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQHTGLNQHIRTHTGEKPFACDI-- 67
Query: 75 CTKRYTDPSSLRKHAKNH 92
          C +++    +  +H K H
Sbjct: 68 CGRKFATLHTRDRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHF 63
          C + FSR ++L  H R+HTGE+P++C  + C + F+ S +R +H + H 
Sbjct: 40 CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHTKIHL 86

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRP 67
          C K+FS   +L  H+R+HTGE+PY C  + C KAF   S    H R H  + P
Sbjct: 24 CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ 59
          C + FSR ++L  H R+HTGE+P++C    C + F+ S +R +H+
Sbjct: 9  CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHR 51

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT--RPYKCMY 72
          C K F  + +L  H+ SH+GE+PYSC    C   F      + H R+H  +  +PY C  
Sbjct: 13 CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYIC-- 68
Query: 73 KGCTKRYTDPSSLRKHAK 90
          + C K ++ P  L  H K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          RPY+C  E C + FS S +  +H R H   +P++C  + C + ++    L  H + H
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTH 72

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 6  DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKH-QRTH 62
           F+C     C +AF+R E+LK H RSHT E+PY C    C++AF+      +H Q+ H
Sbjct: 2  SFVCEV---CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIH 54

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 12 FPHCAKAFSRLENLKIHQR-SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
          FP C + FS  + L  H++  H  ++ +SC    C K+F+      +H + H DTR Y C
Sbjct: 12 FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 71
Query: 71 MYKG 74
           + G
Sbjct: 72 EFSG 75

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-42
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-32
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-30
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-21
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-29
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-27
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-17
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-27
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-27
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-26
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-23
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-19
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-19
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-14
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-13
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-13
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-11
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	6e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	9e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	6e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	9e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-06
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	7e-06
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	6e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	7e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-05
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	1e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	3e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	5e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  138 bits (350), Expect = 3e-42
 Identities = 57/82 (69%), Positives = 64/82 (78%), Gaps = 1/82 (1%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTHFDTRPYKC 70
           F  C K++SRLENLK H RSHTGE+PY C +EGC KAFSN+SDRAKHQ RTH + +PY C
Sbjct: 72  FEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC 131

Query: 71  MYKGCTKRYTDPSSLRKHAKNH 92
              GCTKRYTDPSSLRKH K  
Sbjct: 132 KLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  103 bits (260), Expect = 8e-29
 Identities = 28/76 (36%), Positives = 44/76 (57%)

Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
               + F     L +H R HTGE+P+ CT+EGC K++S   +   H R+H   +PY C +
Sbjct: 43  SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH 102

Query: 73  KGCTKRYTDPSSLRKH 88
           +GC+K +++ S   KH
Sbjct: 103 EGCSKAFSNASDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 87.3 bits (217), Expect = 2e-22
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 11 QFPHCAKAFSRLENLKIH---QRSHTGERPYSCTYEGC---HKAFSNSSDRAKHQRTHFD 64
          ++  C++ F   E L  H   +  H   + + C + GC    + F        H R H  
Sbjct: 5  RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 65 TRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
           +P+KC ++GC K Y+   +L+ H ++H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 8/64 (12%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKH---QRTHFDTRPYKCMYKGCT---KRYTDPSSLRKH 88
          E       +GC + F +      H   +  H + + + C + GC+   + +     L  H
Sbjct: 1  ETDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 89 AKNH 92
           + H
Sbjct: 59 MRRH 62

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 6/24 (25%), Positives = 13/24 (54%)

Query: 11  QFPHCAKAFSRLENLKIHQRSHTG 34
           + P C K ++   +L+ H ++  G
Sbjct: 132 KLPGCTKRYTDPSSLRKHVKTVHG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  113 bits (286), Expect = 1e-32
 Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 7   FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
           F C  FP C K F+R ENLKIH+R+HTGE+P+ C +EGC + F+NSSDR KH   H   +
Sbjct: 91  FPCP-FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

Query: 67  PYKC 70
               
Sbjct: 150 SGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  106 bits (268), Expect = 6e-30
 Identities = 31/80 (38%), Positives = 46/80 (57%)

Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
           P   K+F     L  H R HTGE+P+ C + GC K F+ S +   H+RTH   +P+KC +
Sbjct: 66  PREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF 125

Query: 73  KGCTKRYTDPSSLRKHAKNH 92
           +GC +R+ + S  +KH   H
Sbjct: 126 EGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 85.4 bits (212), Expect = 1e-21
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 7/86 (8%)

Query: 14  HCAKAFSRLENLKIHQRSHTGERPYSCTYEG-------CHKAFSNSSDRAKHQRTHFDTR 66
            C + FS +  L  H        P    +           K+F        H R H   +
Sbjct: 30  SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK 89

Query: 67  PYKCMYKGCTKRYTDPSSLRKHAKNH 92
           P+ C + GC K +    +L+ H + H
Sbjct: 90  PFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 63.1 bits (154), Expect = 4e-13
 Identities = 9/85 (10%), Positives = 21/85 (24%), Gaps = 9/85 (10%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
             +   ++     +     +       + C + FS   +   H        P +  +  
Sbjct: 3  SGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 75 -------CTKRYTDPSSLRKHAKNH 92
                   K +     L  H + H
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.1 bits (123), Expect = 9e-09
 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 7   FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
           F C +F  C + F+   + K H   HT ++    +
Sbjct: 121 FKC-EFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  104 bits (262), Expect = 2e-29
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 7   FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
            +C++   C KAF     LK HQ  HTGE+P+ CT+EGC K FS   +   H R H   R
Sbjct: 35  HVCAE---CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91

Query: 67  PYKCMYKGCTKRYTDPSSLRKHAKNH 92
           PY C + GC K++   ++L+ H   H
Sbjct: 92  PYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 88.7 bits (221), Expect = 3e-23
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
            C     C K F     ++ H  +H G R + C    C KAF  SS   +HQ  H   +
Sbjct: 6  IACPH-KGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEK 61

Query: 67 PYKCMYKGCTKRYTDPSSLRKHAKNH 92
          P++C ++GC KR++   +LR H + H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 81.8 bits (203), Expect = 2e-20
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query: 15  CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYK 69
           C K FS   NL+ H R HTG+RPY C ++GC+K F+ S++   H  TH   +  +
Sbjct: 70  CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
           R  +C ++GC K F ++S   KH  TH   R + C    C K + + S L++H   H
Sbjct: 3  PRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVC--AECGKAFVESSKLKRHQLVH 57

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  103 bits (259), Expect = 2e-29
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 11 QFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
           +P C K +++  +LK H R+HTGE+PY CT+EGC   F+ S +  +H R H   +P++C
Sbjct: 19 DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC 78

Query: 71 MYKGCTKRYTDPSSLRKHAKNH 92
              C + ++    L  H K H
Sbjct: 79 GV--CNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 67.7 bits (166), Expect = 2e-15
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 18 AFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTK 77
          +          +R H       C Y GC K ++ SS    H RTH   +PYKC ++GC  
Sbjct: 2  SSGSSGPDLEKRRIHY------CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55

Query: 78 RYTDPSSLRKHAKNH 92
          R+     L +H + H
Sbjct: 56 RFARSDELTRHYRKH 70

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 98.8 bits (247), Expect = 2e-27
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 11 QFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
           +  C K +++  +LK H R+HTGE+PY C ++GC   F+ S +  +H R H   RP++C
Sbjct: 9  DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 71 MYKGCTKRYTDPSSLRKHAKNH 92
              C + ++    L  H K H
Sbjct: 69 QK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 70.6 bits (174), Expect = 9e-17
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHF 63
          + C  +  C   F+R + L  H R HTG RP+ C    C +AFS S   A H + HF
Sbjct: 36 YHCD-WDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.1 bits (157), Expect = 4e-14
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKN 91
           T      C Y GC K ++ SS    H RTH   +PY C + GC  ++     L +H + 
Sbjct: 2  RTATHT--CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 92 H 92
          H
Sbjct: 60 H 60

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 97.6 bits (244), Expect = 3e-27
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQR-SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT 65
            C  FP C + FS  + L  H++  H  ++ +SC    C K+F+      +H + H DT
Sbjct: 8  MPCD-FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66

Query: 66 RPYKCMYKGCT 76
          R Y C + G +
Sbjct: 67 RDYICEFSGPS 77

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.7 bits (187), Expect = 1e-18
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTRPYKCMYKGCTKRYTDPSSLRKHAK 90
           +G     C + GC + FSN      H++  H   + + C    C K +     L++H K
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 91 NH 92
           H
Sbjct: 62 LH 63

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 96.9 bits (242), Expect = 7e-27
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
          F +C KAF +   LK+HQ SHT + PY C +EGC K FS  S   +H++ H      K  
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD- 64

Query: 72 YKGCTKRYTDPSSLRKHAKNHNH 94
             C+      +   KH     H
Sbjct: 65 -DSCSFVGKTWTLYLKHVA-ECH 85

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 98.0 bits (245), Expect = 8e-27
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F  C + FSR + LK HQR HTG +P+ C  + C + FS S     H RTH   +P+ C 
Sbjct: 41  FKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTGEKPFSCR 98

Query: 72  YKGCTKRYTDPSSLRKHAKNH 92
           +  C K++     L +H   H
Sbjct: 99  WPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 95.7 bits (239), Expect = 6e-26
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
          F+C+  P C K + +L +L++H R HTGE+PY C ++ C + FS S    +HQR H   +
Sbjct: 7  FMCAY-PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65

Query: 67 PYKCMYKGCTKRYTDPSSLRKHAKNH 92
          P++C  K C ++++    L+ H + H
Sbjct: 66 PFQC--KTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          + +RP+ C Y GC+K +   S    H R H   +PY+C +K C +R++    L++H + H
Sbjct: 2  SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 99.2 bits (248), Expect = 2e-26
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
          CS F  C  A+++   L+ H   HTGE+P+ C  EGC K F++     +H  TH   + +
Sbjct: 15 CS-FADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 73

Query: 69 KCMYKGCTKRYTDPSSLRKHAKNH 92
           C   GC  R+T  ++++KH    
Sbjct: 74 TCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 96.9 bits (242), Expect = 1e-25
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGER--PYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
           C     C   F+   N+K H       +   Y C +E C KAF   +    HQ +H    
Sbjct: 75  CDS-DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQL 133

Query: 67  PYKCMYKGCTKRYTDPSSLRKHAKNH 92
           PY+C ++GC KR++ PS L++H K H
Sbjct: 134 PYECPHEGCDKRFSLPSRLKRHEKVH 159

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 86.1 bits (214), Expect = 2e-21
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 12  FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM 71
           F +C KAF +   LK+HQ SHT + PY C +EGC K FS  S   +H++ H      K  
Sbjct: 109 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD- 167

Query: 72  YKGCTKRYTDPSSLRKH 88
              C+      +   KH
Sbjct: 168 -DSCSFVGKTWTLYLKH 183

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.8 bits (195), Expect = 1e-18
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRK 87
           +      + Y C++  C  A++ +     H   H   +P+ C  +GC K +T    L +
Sbjct: 3  EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 88 HAKNH 92
          H+  H
Sbjct: 63 HSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 14/55 (25%), Positives = 17/55 (30%), Gaps = 4/55 (7%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKH-QRTH 62
           C     C K FS    LK H++ H G          C       +   KH    H
Sbjct: 137 CPH-EGCDKRFSLPSRLKRHEKVHAGYPCKKD-DS-CSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 7/36 (19%), Positives = 11/36 (30%)

Query: 57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
            +      + Y C +  C   Y     L+ H   H
Sbjct: 2  GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH 37

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 89.4 bits (223), Expect = 6e-24
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYK 73
           C + FS+  +L  H R HTG++P+ C    C + FS S     H RTH   +P+ C   
Sbjct: 11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI- 67

Query: 74 GCTKRYTDPSSLRKHAKNH 92
           C +++      ++H K H
Sbjct: 68 -CGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 75.2 bits (186), Expect = 2e-18
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          F C     C + FSR ++L  H R+HTGE+P++C  + C + F+ S +R +H + H
Sbjct: 35 FQCRI---CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          ERPY+C  E C + FS S    +H R H   +P++C  + C + ++    L  H + H
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTH 57

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 3/30 (10%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGER 36
          F C     C + F+R +  K H + H  ++
Sbjct: 63 FACDI---CGRKFARSDERKRHTKIHLRQK 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 89.0 bits (222), Expect = 1e-23
 Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
          C     C K FSR + LK H R HTG +PY C  + C  A ++SS   KH R H D RP+
Sbjct: 11 CEV---CGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPF 65

Query: 69 KCMYKGCTKRYTDPSSLRKHAKNH 92
          KC  + C     + S L  H ++H
Sbjct: 66 KC--QICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.9 bits (162), Expect = 9e-15
 Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAK 90
          S     P+ C  E C K FS       H R H   +PYKC  K C     D SSL KH +
Sbjct: 2  SSGSSGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLR 57

Query: 91 NH 92
           H
Sbjct: 58 IH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C     C  A      L +H RSHTG+   S 
Sbjct: 67 CQI---CPYASRNSSQLTVHLRSHTGDSGPSS 95

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 87.2 bits (217), Expect = 5e-23
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT- 65
          F C     C + FSR ++L  H R+HTGE+P++C  + C + F+ S +R +H+       
Sbjct: 4  FQCRI---CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQ--HI 56

Query: 66 RPYKCMYKGCTKRYTDPSSLRKH 88
           P         +  +    L   
Sbjct: 57 LPILEDK--VEELLSKNYHLENE 77

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 85.6 bits (213), Expect = 1e-22
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
          C     C K+F R   L  H   H+  RPY C Y  C K F   SD  KH   H   +P+
Sbjct: 4  CKI---CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPH 58

Query: 69 KCMYKGCTKRYTDPSSLRKHAKNH 92
          KC  + C K ++  S+L  H++ H
Sbjct: 59 KC--QVCGKAFSQSSNLITHSRKH 80

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 86.3 bits (215), Expect = 2e-22
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYK 73
           C + F++  NL IH+R+HT ERPY+C  + CHKAF        H+  H   +P+KC  +
Sbjct: 22 FCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKC--Q 77

Query: 74 GCTKRYTDPSSLRKHAKNH 92
           C K +    +L  H   H
Sbjct: 78 ECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 77.1 bits (191), Expect = 6e-19
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
           C     C KAF R ++L+ H+  H+ E+P+ C  + C K F  S   A H+  H  T   
Sbjct: 48  CDI---CHKAFRRQDHLRDHRYIHSKEKPFKC--QECGKGFCQSRTLAVHKTLHMQTSSP 102

Query: 69  KC 70
             
Sbjct: 103 TA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 73.2 bits (181), Expect = 2e-17
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS 83
               +     ++ + C  + C + F+ S +   H+RTH D RPY C    C K +    
Sbjct: 4  GSSGGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQD 59

Query: 84 SLRKHAKNH 92
           LR H   H
Sbjct: 60 HLRDHRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 47.8 bits (115), Expect = 6e-08
 Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 3/33 (9%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
           C +   C K F +   L +H+  H      +  
Sbjct: 76  CQE---CGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 84.1 bits (209), Expect = 9e-22
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 9/86 (10%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHF--D 64
            C     C K F  + +L  H+ SH+GE+PYSC    C   F      + H R+H    
Sbjct: 8  VACEI---CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSV 62

Query: 65 TRPYKCMYKGCTKRYTDPSSLRKHAK 90
           +PY C  + C K ++ P  L  H K
Sbjct: 63 GKPYIC--QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKN 91
           +G    +C    C K F +     +H+ +H   +PY C    C  R+     +  H ++
Sbjct: 2  SSGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRS 57

Query: 92 H 92
          H
Sbjct: 58 H 58

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 86.0 bits (214), Expect = 2e-21
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 7/84 (8%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
           C +   C K+FSR ++L  HQR+HTGE+PY C    C K+FS+  D  +HQRTH   +PY
Sbjct: 24  CPE---CGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPY 78

Query: 69  KCMYKGCTKRYTDPSSLRKHAKNH 92
           KC    C K ++  ++LR H + H
Sbjct: 79  KC--PECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.8 bits (211), Expect = 4e-21
 Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
           C +   C K+FS+L +L+ HQR+HTGE+PY C    C K+FS   +   HQRTH   +PY
Sbjct: 108 CPE---CGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPY 162

Query: 69  KCMYKGCTKRYTDPSSLRKHAKNH 92
           KC    C K ++   +L  H + H
Sbjct: 163 KC--PECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.0 bits (209), Expect = 8e-21
 Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
           C +   C K+FS+  NL+ HQR+HTGE+PY+C    C K+FS  +    HQRTH   +PY
Sbjct: 80  CPE---CGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPY 134

Query: 69  KCMYKGCTKRYTDPSSLRKHAKNH 92
           KC    C K ++   +L  H + H
Sbjct: 135 KC--PECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 77.1 bits (191), Expect = 4e-18
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 18 AFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTK 77
          +     +         GE+PY+C    C K+FS S   A+HQRTH   +PYKC    C K
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTGEKPYKC--PECGK 57

Query: 78 RYTDPSSLRKHAKNH 92
           ++D   L +H + H
Sbjct: 58 SFSDKKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERP 37
           C +   C K+FSR + L +HQR+HTG++ 
Sbjct: 164 CPE---CGKSFSRRDALNVHQRTHTGKKT 189

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 82.0 bits (203), Expect = 3e-21
 Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
           +CS  P C K + +  +LK H R+HTGE+P+SC+++GC + F+ S + ++H+RTH
Sbjct: 18 HICS-HPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 75.5 bits (186), Expect = 9e-19
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 25 LKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSS 84
              Q   +  R + C++ GC K +  SS    H RTH   +P+ C +KGC +R+     
Sbjct: 5  SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 85 LRKHAKNH 92
          L +H + H
Sbjct: 65 LSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 52 SSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          SS  +  Q      R + C + GC K Y   S L+ H + H
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 81.3 bits (202), Expect = 1e-20
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYK 73
           C K+F+       H   H G RPY C    C K F        H + H   +PY+C   
Sbjct: 14 QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYEC--N 69

Query: 74 GCTKRYTDPSSLRKH 88
           C KR+    S  +H
Sbjct: 70 ICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 76.3 bits (189), Expect = 1e-18
 Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 9/78 (11%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
           C     C K F    +L  H + HTG +PY C    C K F        H+     T+ Y
Sbjct: 40  CGV---CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSF--HRHVTSCTKSY 92

Query: 69  KCMYKGCTKRYTDPSSLR 86
           +       +  T+ S   
Sbjct: 93  EA--AKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.9 bits (162), Expect = 1e-14
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHA 89
             +G++ Y C    C K+F++ S R +H   H   RPY C    C K++     L  H 
Sbjct: 3  SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHM 57

Query: 90 KNH 92
          K H
Sbjct: 58 KIH 60

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.0 bits (201), Expect = 3e-20
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRS---HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT 65
           C +   C K + R ENL  H+     +  E+ ++C+   C + F    +   H  +H   
Sbjct: 38  CPK---CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGE 92

Query: 66  RPYKCMYKGCTKRYTDPSSLRKH 88
            PYKC    C++++     L+ H
Sbjct: 93  MPYKC--SSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.2 bits (199), Expect = 5e-20
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQR---THFDT 65
          C     C K F     LK+H R HTGE+P+ C    C K +    +  +H+     +   
Sbjct: 10 CPT---CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSE 64

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          + + C    C + +     LR H  +H
Sbjct: 65 QVFTC--SVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.8 bits (164), Expect = 7e-15
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 9   CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTH 62
           CS    C + F R   L++H  SHTGE PY C+   C + F    D   H  + H
Sbjct: 69  CSV---CQETFRRRMELRLHMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKH 88
           +G     C    CHK F +      H R H   +P++C    C K Y    +L +H
Sbjct: 2  SSGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFEC--PKCGKCYFRKENLLEH 54

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 76.8 bits (190), Expect = 5e-19
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH----FDTRPYKCMYKGCTKRY 79
          +     R+HTGE+PY+C++  C K F        H + +    F    + C    C K +
Sbjct: 2  SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTF 57

Query: 80 TDPSSLRKHAKNH 92
          T  +++ +HA N 
Sbjct: 58 TRRNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 71.0 bits (175), Expect = 7e-17
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 14 HCAKAFSRLENLKIHQRSHTGE----RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYK 69
          HC K F + + L +H + +         + C+   C K F+  +  A+H          +
Sbjct: 20 HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVE 77

Query: 70 C 70
           
Sbjct: 78 G 78

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.1 bits (126), Expect = 9e-10
 Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 5/43 (11%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAF 49
          F+CS+   C K F+R   +  H  +  G             + 
Sbjct: 48 FVCSK---CGKTFTRRNTMARHADNCAGPDGVEGEN--SGPSS 85

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 75.6 bits (187), Expect = 9e-19
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH--FDTRPYKCMYKGCTKRYTD 81
          +     R+H+GE+PY C    CH  F+ S     H       +   + C +  C      
Sbjct: 2  SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIAR 57

Query: 82 PSSLRKHAKNH 92
           S L  H +  
Sbjct: 58 KSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 62.9 bits (154), Expect = 8e-14
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 5/59 (8%)

Query: 13 PHCAKAFSRLENLKIHQRSHTGE--RPYSCTYEGCHKAFSNSSDRAKHQRT-HFDTRPY 68
            C   F++   +K+H      E    + C +  C    +  SD   H R  H  + P 
Sbjct: 19 YICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 13 PHCAKAFSRLENLKIHQRS-HTGERPYS 39
          PHC    +R  +L +H R  H+   P S
Sbjct: 49 PHCDTVIARKSDLGVHLRKQHSYSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.2 bits (181), Expect = 7e-18
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS 83
          +    +      R Y C    C K+FS+SSD +KH+RTH   +PYKC    C K +   S
Sbjct: 5  SSGRSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRS 60

Query: 84 SLRKHAKNH 92
           L  H + H
Sbjct: 61 HLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.1 bits (178), Expect = 2e-17
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYK 69
          C K+FS   +L  H+R+HTGE+PY C  + C KAF   S    H R H  + P  
Sbjct: 24 CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 52 SSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          S    + +    + R YKC    C K ++  S L KH + H
Sbjct: 3  SGSSGRSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTH 41

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 72.9 bits (180), Expect = 1e-17
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS 83
          +   H      ++PY C  + C  +F    + A H+  H   +PY+C    C  ++  P+
Sbjct: 4  HHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPA 59

Query: 84 SLRKHAKNH 92
          +L+ H + H
Sbjct: 60 NLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 69.8 bits (172), Expect = 1e-16
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
          C  +F    NL  H+  HTGE+PY C    C   F+  ++   H R H   +PY
Sbjct: 23 CQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 2/41 (4%)

Query: 52 SSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
                H       +PYKC    C   +    +L  H   H
Sbjct: 2  GHHHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVH 40

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 71.7 bits (177), Expect = 2e-17
 Identities = 27/54 (50%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
          C KAFSR   L  HQR HTGE+PY C    C KAFS +S    HQR H      
Sbjct: 20 CGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 71.0 bits (175), Expect = 5e-17
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 25 LKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSS 84
                 H+GE+PY C    C KAFS SS   +HQR H   +PYKC    C K ++  S 
Sbjct: 2  SSGSSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSG 57

Query: 85 LRKHAKNH 92
          L  H + H
Sbjct: 58 LINHQRIH 65

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 71.4 bits (176), Expect = 3e-17
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 6/57 (10%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKH-QRTH 62
          F+C     C +AF+R E+LK H RSHT E+PY C    C++AF+      +H Q+ H
Sbjct: 3  FVCEV---CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIH 54

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.9 bits (172), Expect = 1e-16
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT--RPYKCMYKGCTKRYTDPSSLR 86
          + +  GE  Y C    C + +++ S+  +H  T      + Y C +  C K +T   ++ 
Sbjct: 2  EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMT 57

Query: 87 KHAKNHN 93
           H K  +
Sbjct: 58 AHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 68.0 bits (167), Expect = 7e-16
 Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 13 PHCAKAFSRLENLKIHQRS--HTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
            C++ ++ + N   H  +      + Y C +  C K F+   +   H +  
Sbjct: 14 KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 59 QRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH 94
          + T      Y+C    C++ YT  S+  +H    + 
Sbjct: 2  EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHK 35

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 13 PHCAKAFSRLENLKIHQRSHTG 34
          P C K F+R +N+  H +    
Sbjct: 44 PFCFKEFTRKDNMTAHVKIIHK 65

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 70.0 bits (172), Expect = 1e-16
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 19 FSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKR 78
             + NL  +       RPY+C  E C + FS S +  +H R H   +P++C  + C + 
Sbjct: 3  PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRN 58

Query: 79 YTDPSSLRKHAKNH 92
          ++    L  H + H
Sbjct: 59 FSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 65.8 bits (161), Expect = 5e-15
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          + C     C + FSR + L  H R HTG++P+ C    C + FS S     H RTH
Sbjct: 20 YACP-VESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTH 72

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 66.2 bits (162), Expect = 2e-15
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P++CT+ GC   FS S + ++H+R+H   +P   
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.1 bits (123), Expect = 9e-10
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          F C+ +P C   FSR + L  H+RSH+G +P   +
Sbjct: 13 FACT-WPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 41.9 bits (99), Expect = 2e-06
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
             +    +P+ C + GC  R++    L +H ++H
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 66.0 bits (162), Expect = 3e-15
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
            CS+   C+ + S    L+IH+R H  +RP+ C Y  C       S+ +KH +  
Sbjct: 10 EKCSE---CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 65.6 bits (161), Expect = 5e-15
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHA 89
           S +   P  C+   C  + S+ +    H+R H   RP+KC Y  C+     PS+L KH 
Sbjct: 2  SSGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHM 57

Query: 90 KNH 92
          K  
Sbjct: 58 KKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 6/33 (18%), Positives = 12/33 (36%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C+    C+    +  NL  H +   G+     +
Sbjct: 40 CNY---CSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGERPY CT   C KAF++ S+  KHQ+ H   +P   
Sbjct: 3  SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C+    C KAF+   NL  HQ+ HTGE+P   
Sbjct: 15 CTV---CGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+PY C Y  C KAF  S++  +HQR H   +P   
Sbjct: 3  SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
          +C KAF     L  HQR HTGE+P   +
Sbjct: 17 YCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 63.3 bits (155), Expect = 3e-14
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TGE+PY C    C KAF+  S+   HQRTH        
Sbjct: 2  SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C++   C KAF+   NL +HQR+HTGE   S 
Sbjct: 15 CNE---CQKAFNTKSNLMVHQRTHTGESGPSS 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 4e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TGE+PY C  E C K +++  +   HQ+ H   RP   
Sbjct: 2  SSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 6e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C +   C K ++   NL +HQ+ HTGERP   +
Sbjct: 15 CEK---CGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PYKC  + C K Y    +L  H K H
Sbjct: 1  GSSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.6 bits (153), Expect = 6e-14
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TG+RPY C    C KAF   S    H+R+H   +P   
Sbjct: 3  SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 9e-09
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEG 44
          C +   C KAF    +L  H+RSHTGE+P   +  G
Sbjct: 15 CIE---CGKAFKTKSSLICHRRSHTGEKPSGPS-SG 46

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    RPY+C    C K +   SSL  H ++H
Sbjct: 1  GSSGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 6e-14
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C  E C K F    D   H   H   +P   
Sbjct: 3  SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 5e-08
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F    +L  H   HTGE+P   +
Sbjct: 18 CGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 6e-14
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TG +PY C    C KAFS +S  A+HQR H   +P   
Sbjct: 2  SSGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 4e-08
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAFS+   L  HQR HTGE+P   +
Sbjct: 18 CGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 6e-14
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGER Y C+   C KAF+  S    HQR H   +P   
Sbjct: 3  SGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 8e-09
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS+   C KAF+R   L +HQR HTGE+P   +
Sbjct: 15 CSE---CGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 7e-14
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S +GE+PY C    C K FS  S  + HQRTH   +P   
Sbjct: 2  SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 4e-08
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEG 44
          C++   C K FS+   L  HQR+HTGE+P   +  G
Sbjct: 15 CNE---CGKTFSQKSILSAHQRTHTGEKPSGPS-SG 46

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 62.2 bits (152), Expect = 7e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY+C  + C K+F  +S   KHQR H   +P   
Sbjct: 3  SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 46.8 bits (112), Expect = 5e-08
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C +   C K+F     L  HQR H+GE+P   +
Sbjct: 15 CKE---CGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY C  K C K +   S L KH + H
Sbjct: 1  GSSGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 62.1 bits (152), Expect = 8e-14
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C    C K+FS SS  A HQR H   +P   
Sbjct: 3  SGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C++   C K+FS    L  HQR HTGE+P   +
Sbjct: 15 CAE---CGKSFSISSQLATHQRIHTGEKPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 8e-14
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C+   C K+F   S    HQR H    P   
Sbjct: 3  SGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          CS    C K+F +   L +HQR HTGE P   
Sbjct: 15 CSD---CGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY+C    C K +   S L  H + H
Sbjct: 1  GSSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 8e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TGE+PY C+   C K+F+  S    HQ+ H   +P   
Sbjct: 2  SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 4e-09
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS    C K+F++   L +HQ+ HTGE+P   +
Sbjct: 15 CSI---CGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY+C    C K +T  S L  H + H
Sbjct: 1  GSSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 9e-14
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TGE+PY C+   C KAFS+    + HQR H   +P   
Sbjct: 2  SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 8e-09
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS    C KAFS  ++L +HQR H+G++P   +
Sbjct: 15 CSV---CGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 61.8 bits (151), Expect = 9e-14
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TG +PY C+   C K FS  S    HQR+H   +P   
Sbjct: 3  SGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CSQ   CAK FS    L +HQRSHTG +P   +
Sbjct: 15 CSQ---CAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TG++P+ CT+  C K+F    +   HQR H   +    
Sbjct: 2  SSGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.1 bits (118), Expect = 5e-09
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
          HC K+F    NL  HQR HTGE+    +
Sbjct: 17 HCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF+  S+  KHQ+ H   +P   
Sbjct: 3  SGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C++   C KAF+   NL  HQ+ HT ++P   +
Sbjct: 15 CAE---CGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 1e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C+   C KAF+  S+   HQRTH   +P   
Sbjct: 3  SGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          F CS+   C KAF+   NL +HQR+HTGE+P   +
Sbjct: 13 FECSE---CQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TG +PY C    C KAFS  S    HQ  H   +P   
Sbjct: 3  SGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 9e-08
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSC 40
          C KAFS   +L  HQ  HTGE+P   
Sbjct: 18 CGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY C    C K ++  SSL  H   H
Sbjct: 1  GSSGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY+C  E C KAF + S   +HQR H   +P   
Sbjct: 3  SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF     L+ HQR HTGE+P   +
Sbjct: 18 CGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF ++S   +HQR H   RP   
Sbjct: 3  SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF    +   HQR HTG+RP   +
Sbjct: 18 CGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PYKC    C K + D SS  +H + H
Sbjct: 1  GSSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S TGE+PY C    C KAFS+ +   +HQR H   +P   
Sbjct: 2  SSGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C     C KAFS   +L  HQR H+GE+P   +
Sbjct: 15 CDV---CRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAFS  S    HQ  H   +P   
Sbjct: 3  SGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C+Q   C KAFS   +L  HQ  HTG++P   +
Sbjct: 15 CNQ---CGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY+C    C K ++  SSL  H   H
Sbjct: 1  GSSGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+PY C    C K +    D   HQR H   +    
Sbjct: 3  SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 5e-09
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K + R  +L  HQR HTGE+    +
Sbjct: 18 CGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C  + CHK+F   S    HQR H   +P   
Sbjct: 3  SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 5e-08
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K+F    +L +HQR HTGE+P   +
Sbjct: 18 CHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE PY C    C KAFS       HQRTH   +P   
Sbjct: 3  SGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 8e-09
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAFSR   L  HQR+H GE+P   +
Sbjct: 18 CGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              S  GE+ Y C  + C K FS SS    HQR H   +P   
Sbjct: 2  SSGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 5e-08
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K FS+  +L+ HQR HTGE+P   +
Sbjct: 18 CGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.3 bits (150), Expect = 1e-13
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TG +PY C    C KAF + S    H RTH        
Sbjct: 3  SGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.6 bits (117), Expect = 7e-09
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C++   C KAF     L IH R+HTGE   S 
Sbjct: 15 CNE---CGKAFRSKSYLIIHTRTHTGESGPSS 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE P+ C+   C K F++ ++   HQ+ H   RP   
Sbjct: 3  SGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 5e-09
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          F+CS+   C K F+   NL IHQ+ HTGERP   +
Sbjct: 13 FICSE---CGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S + E+PY C  E C K ++   +   HQR H   +    
Sbjct: 3  SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K ++R  NL +HQR H GE+    +
Sbjct: 18 CGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+ Y+C  + C K+FS +    KH+R H   +P   
Sbjct: 3  SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K+FSR   L  H+R H+GE+P   +
Sbjct: 18 CGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAFS +S  A+HQR H   +P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAFS+   L  HQR HTGE+P   +
Sbjct: 18 CGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF++ S+   HQ+ H   +P   
Sbjct: 3  SGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C++   C KAF+   NL  HQ+ HTGE+P   
Sbjct: 15 CAE---CGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY+C    C K +TD S+L  H K H
Sbjct: 1  GSSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C    C K+FS +S    HQR H    P   
Sbjct: 3  SGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C +   C K+FS    L +HQR HTGE P   +
Sbjct: 15 CRE---CGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S  GE+PY C+   C KAFS+ S    H RTH   +P   
Sbjct: 3  SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 5e-09
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS+   C KAFS    L IH R+H+GE+P   +
Sbjct: 15 CSE---CGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF   S  A HQ TH   +P   
Sbjct: 3  SGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
           C KAF    +L IHQ +H+GE+P   +
Sbjct: 17 ECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PYKC    C K +   SSL  H   H
Sbjct: 1  GSSGSSGTGEKPYKC--NECGKAFRARSSLAIHQATH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGER Y C    C KAF   S  + HQR H   +P   
Sbjct: 3  SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS+   C KAF +   L +HQR H GE+P   +
Sbjct: 15 CSE---CGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C+   C KAF+  S    HQ++H   R    
Sbjct: 3  SGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 9e-10
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS    C KAF+R   L IHQ+SHTGER    +
Sbjct: 15 CSD---CGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PYKC    C K +T  S L  H ++H
Sbjct: 1  GSSGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 60.6 bits (148), Expect = 2e-13
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C    C K FS  S    H + H   +P   
Sbjct: 3  SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.7 bits (117), Expect = 8e-09
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K FSR   L +H + HTGE+P   +
Sbjct: 18 CGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +P+KC    C K ++  S+L  H K H
Sbjct: 1  GSSGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TG + + CT   C KAF+  S  + HQ+ H   +P   
Sbjct: 3  SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C++   C KAF+R   L +HQ+ HTGE+P   +
Sbjct: 15 CTE---CGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGERP+ C    C K+F  S+   +HQR H   +P   
Sbjct: 3  SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 6e-08
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K+F +  +L  HQR HTGE+P   +
Sbjct: 18 CGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C+   C K+F+  S    HQ+ H   R    
Sbjct: 3  SGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS    C K+F+    L+IHQ+ HTGER    +
Sbjct: 15 CSD---CGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PYKC    C K +T  S LR H K H
Sbjct: 1  GSSGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF   S+   HQ  H   +P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF    NL  HQ  HTGE+P   +
Sbjct: 18 CGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF+  ++  +HQR H   +P   
Sbjct: 3  SGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/27 (51%), Positives = 18/27 (66%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF++  NL  HQR HTGE+P   +
Sbjct: 18 CGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 4e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAF+  +  A+HQ+TH   +P   
Sbjct: 3  SGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
           C+KAF++  +L  HQ++HTGE+P   +
Sbjct: 17 VCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY+C  K C+K +T  + L +H K H
Sbjct: 1  GSSGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 4e-13
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K+F   S   +H+R H   +P   
Sbjct: 3  SGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K+F +  +L  H+R HTGE+P   +
Sbjct: 18 CGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +PY C    C K +   S L +H + H
Sbjct: 1  GSSGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 4e-13
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S  G++ + C    C K F+ SS    HQR H   +P   
Sbjct: 3  SGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L +HQR HTGE+P   +
Sbjct: 18 CKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 4e-13
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+P+ C  E C K F  +S    HQR+H   +P   
Sbjct: 3  SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 3e-08
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F        HQRSH+GE+P   +
Sbjct: 18 CGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +P+KC  + C K +   S    H ++H
Sbjct: 1  GSSGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-13
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K F+ +S  A HQR H   +P   
Sbjct: 3  SGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  HQR HTG +P   +
Sbjct: 18 CGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K F ++S  ++HQR H   +P   
Sbjct: 3  SGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F     L  HQR HTGE+P   +
Sbjct: 18 CGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.8 bits (146), Expect = 4e-13
 Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE PY C    C K FS       HQ+TH        
Sbjct: 3  SGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.4 bits (119), Expect = 4e-09
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C +   C K FSR + L  HQ++H+G+   S 
Sbjct: 15 CCE---CGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 5e-13
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P  CT   C KAF   S    HQRTH D +    
Sbjct: 3  SGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF     L +HQR+H  ++    +
Sbjct: 18 CGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 5e-13
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C    C KAFS+     +H+R H   +P   
Sbjct: 3  SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C     C KAFS    L  H+R HTGE+P   +
Sbjct: 15 CID---CGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +P+ C    C K ++D   L +H + H
Sbjct: 1  GSSGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 59.8 bits (146), Expect = 5e-13
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+ Y C    C K FS +S  ++HQ+ H   +P   
Sbjct: 3  SGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K FSR   L  HQ+ HTGE+P   +
Sbjct: 18 CGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 59.8 bits (146), Expect = 6e-13
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C KAFS ++   +HQR H   +P   
Sbjct: 3  SGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
           C KAFS+  +L  HQR HTGE+P   +
Sbjct: 17 ECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 6e-13
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C  + C KAF  SS   +H   H   RP   
Sbjct: 3  SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF    +L  H   H+GERP   +
Sbjct: 18 CGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 7e-13
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K F  +S  A+HQ  H   +P   
Sbjct: 3  SGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F R  +L  HQ  HTGE+P   +
Sbjct: 18 CGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 7e-13
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C  + C K+F   S   +H   H   +P   
Sbjct: 3  SGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 8e-08
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K+F     L  H   HT E+P   +
Sbjct: 18 CGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 8e-13
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+P+ C  E C K F+ +S    HQR H   +P   
Sbjct: 3  SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++   L  HQR HTGE+P   +
Sbjct: 18 CGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +P+KC  + C KR+T  S L  H + H
Sbjct: 1  GSSGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 8e-13
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GERPY C    C K F   S   +H + HF  +    
Sbjct: 3  SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 9e-09
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F R  +L  H + H  E+    +
Sbjct: 18 CGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 8e-13
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PYSC    C KAF  S+   +H R H        
Sbjct: 3  SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          C+    C KAF    +L  H R HT E     +
Sbjct: 15 CNV---CGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 8e-13
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K F+ +S  A+H+  H   +P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  H+  HTGE+P   +
Sbjct: 18 CGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 9e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K F+ +S  A+H+R H   +P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  H+R HTG +P   +
Sbjct: 18 CGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 9e-13
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TG++PY C    C K F+ +S  A+H+  H   +P   
Sbjct: 3  SGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-07
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  H+  HTGE+P   +
Sbjct: 18 CGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 9e-13
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+PY C    C KAF   +   +H+R H   RP   
Sbjct: 3  SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 5e-08
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C KAF R  +L  H+R HTG RP   +
Sbjct: 18 CGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 9e-13
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+PY C    C K F+ +S   +H+  H   +P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 9e-08
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  H+  HTGE+P   +
Sbjct: 18 CGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C  + C   FS S    KH R+H  T P   
Sbjct: 3  SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 9/27 (33%), Positives = 10/27 (37%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSC 40
           C   FS   +L  H RSH    P   
Sbjct: 17 ECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +    +P++C  K C   ++   SL KH ++H
Sbjct: 1  GSSGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S  GE+PY C+   C K+FS S    +H  TH   +P   
Sbjct: 3  SGSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 5e-08
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K+FS    L  H  +HT E+P   +
Sbjct: 18 CGKSFSGSYRLTQHWITHTREKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+PY C    C KAF   S    H+RTH        
Sbjct: 3  SGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          C++   C KAF     L +H+R+H G    S 
Sbjct: 15 CNE---CGKAFIWKSLLIVHERTHAGVSGPSS 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+P+ C    C K F+ +S    HQR H   +P   
Sbjct: 3  SGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-08
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  HQR HTGE+P   +
Sbjct: 18 CGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 1e-12
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S  GE+ + C    C   FS +S    HQ  H   +P   
Sbjct: 3  SGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
           C   FS+  +L++HQ  H GE+P   +
Sbjct: 17 ECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-12
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+PY C    C K F+ +S    H R H   +P   
Sbjct: 3  SGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 7e-08
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F++  +L  H R HTGE+P   +
Sbjct: 18 CGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-12
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+P+ C  + C KAF  +   A H R H   +P   
Sbjct: 3  SGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCT 41
           C KAF +  +L  H R HTGE+P   +
Sbjct: 17 ECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S TGE+P+ C    C K+++      +HQR H   +P   
Sbjct: 3  SGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 7e-08
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K++++  +L  HQR HTGE+P   +
Sbjct: 18 CGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 3e-12
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S  G  PY C+   C K+FS       HQR H   +P   
Sbjct: 3  SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 4e-09
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CSQ   C K+FS    L +HQR HT E+P   +
Sbjct: 15 CSQ---CEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 58.6 bits (142), Expect = 3e-12
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 7/64 (10%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT---RPYKCMYKGCTKRYTDPSSLRKH 88
           +G     C    C       +    HQR H +T     + C +  C KR+  P S+  H
Sbjct: 2  SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAH 57

Query: 89 AKNH 92
              
Sbjct: 58 RSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 58.2 bits (141), Expect = 5e-12
 Identities = 13/67 (19%), Positives = 18/67 (26%), Gaps = 8/67 (11%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHT---GERPYSCTYEGCHKAFSNSSDRAKHQRTHF 63
            C     C     +  +L  HQR H        + C +  C K F      A H+    
Sbjct: 8  LQCEI---CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSH 62

Query: 64 DTRPYKC 70
                 
Sbjct: 63 PALLLAP 69

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 57.5 bits (140), Expect = 4e-12
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              +GE PY C+   C KAF+       HQRTH        
Sbjct: 2  SSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSC 40
          CS+   C KAF+R + L  HQR+H GE   S 
Sbjct: 13 CSE---CGKAFNRKDQLISHQRTHAGESGPSS 41

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 5e-12
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GERP+ C    C K F   S  A H R H   +    
Sbjct: 3  SGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 7e-08
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F R  +L  H R H+ E+    +
Sbjct: 18 CGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 5e-12
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +G++PY C    C K F       +H+R H   R    
Sbjct: 3  SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSC 40
           C K F ++ +L  H+R HTGER    
Sbjct: 17 ECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 57.2 bits (139), Expect = 5e-12
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTRPYKC 70
             S TG++PY C    C KAF  ++   +H R  H   +P   
Sbjct: 3  SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRS-HTGERPYSCT 41
          C +   C KAF +  +L  H R  HTGE+P   +
Sbjct: 15 CIE---CGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.2 bits (139), Expect = 6e-12
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S  GER + C    C K F  +S+  +H+R H   +P   
Sbjct: 3  SGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F +  N   H+R HTGE+P   +
Sbjct: 18 CGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.7 bits (135), Expect = 2e-11
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             S  GE+PY C    C KAFS       H R H  + P 
Sbjct: 2  SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYS 39
          C Q   C KAFS+  +L +H R HTG  P S
Sbjct: 14 CDQ---CGKAFSQKGSLIVHIRVHTGSGPSS 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 54.5 bits (132), Expect = 6e-11
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
              +GE+P+ C+   C KAFS+ S    HQ+TH + +P   
Sbjct: 2  SSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          CS    C KAFS    L +HQ++H  E+P   +
Sbjct: 13 CSC---CEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             S  GE+PY C  E C   F   +    H   H  + P 
Sbjct: 2  SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYS 39
           C   F ++ +L+ H   HTG  P S
Sbjct: 16 TCGARFVQVAHLRAHVLIHTGSGPSS 41

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.6 bits (127), Expect = 3e-10
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +  + + C    C + F+  S   +HQR H   +P   
Sbjct: 3  SGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 6e-07
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C + F+   +L  HQR HTGE+P   +
Sbjct: 18 CGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 52.1 bits (126), Expect = 4e-10
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
             S  GE+PY C    C   F +      H R H  + P 
Sbjct: 2  SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYS 39
           C   F  L+ LK H R HTG  P S
Sbjct: 16 ICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 5e-10
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S +GE+ ++C  + C K F   S    HQR H   +    
Sbjct: 3  SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 8e-07
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCT 41
          C K F  +  L+IHQR H GE+    +
Sbjct: 18 CGKNFCYISALRIHQRVHMGEKCSGPS 44

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.8 bits (125), Expect = 6e-10
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 13 PHCAKAFSRLENLKIH-QRSHTGERPYSCTYEGCHKAFSN 51
            C K FSR ++L  H ++ HT ERP+ C  +      S+
Sbjct: 16 QSCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.9 bits (120), Expect = 3e-09
 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKH-QRTHFDTRPYKCMYKGCTKRYTD 81
             S +  +PY C    C K FS       H ++ H   RP+KC         + 
Sbjct: 3  SGSSGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS 53

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
             S T  + Y+C    C KAF+      +HQ+ H        
Sbjct: 3  SGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSC 40
           C KAF+R+ +L  HQ+ HT +   S 
Sbjct: 17 ECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
               +  D++ Y C    C K +T    L +H K H
Sbjct: 1  GSSGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIH 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 49.2 bits (118), Expect = 6e-09
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYK 69
             S  GE PY C    C K+F+     A HQR+   + P  
Sbjct: 2  SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.9 bits (112), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYS 39
          +LC Q   C K+F++  +L +HQRS +   P S
Sbjct: 12 YLCGQ---CGKSFTQRGSLAVHQRSCSQSGPSS 41

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          C     +   LK H R+HT  RPY C    C+ +F    +  KH ++ 
Sbjct: 7  CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 38 YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD 95
          Y C  E C       S   KH RTH D RPY C    C   +    +L KH K+  H 
Sbjct: 2  YIC--EECGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHS 55

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 47.3 bits (113), Expect = 3e-08
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
            R  TG +P+ C    C ++FS S   A H++ H
Sbjct: 2  STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 48.4 bits (115), Expect = 3e-08
 Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 7/63 (11%)

Query: 15 CAKAFSRLENLKIH-QRSHTGERP---YSCTYEGCH---KAFSNSSDRAKHQRTHFDTRP 67
          C + FS +  L  H    H G      + C +E C    K+F        H R H   + 
Sbjct: 31 CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS 90

Query: 68 YKC 70
             
Sbjct: 91 GPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 13 PHCAKAFSRLENLKIHQRSHTGERPYSCT 41
          P   K+F     L  H R HTGE+    +
Sbjct: 66 PREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 7/69 (10%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKH-QRTHFDTRP---YKCMYKGCTKRYTDPSSLRK 87
             +       + C + FS   +   H    H        + C ++ C  R       + 
Sbjct: 20 DEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP-REGKSFKAKY 76

Query: 88 HAKNHNHDH 96
             NH   H
Sbjct: 77 KLVNHIRVH 85

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.8 bits (112), Expect = 4e-08
 Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
              +G+R Y C    C K+F        H+R H  + P 
Sbjct: 2  SSGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 9  CSQFPHCAKAFSRLENLKIHQRSHTGERPYS 39
          C +   C K+F +  +L +H+R HTG  P S
Sbjct: 13 CQE---CGKSFRQKGSLTLHERIHTGSGPSS 40

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.5 bits (110), Expect = 6e-08
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSC 40
           C K F  + +L  H+ SH+GE+PYS 
Sbjct: 17 ICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC 70
            S    +  +C    C K F +     +H+ +H   +PY  
Sbjct: 4  GSSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.0 bits (111), Expect = 8e-08
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 11/69 (15%)

Query: 24 NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS 83
          +    Q+ H G+R   C+   C   F   S  ++        +   C  + C K     +
Sbjct: 5  SSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSRR-------KTPMC--EKCRKDSCQEA 53

Query: 84 SLRKHAKNH 92
          +L K   N 
Sbjct: 54 ALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 7/55 (12%), Positives = 14/55 (25%), Gaps = 9/55 (16%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY 68
           C   F         + + +  +   C  E C K     +   K +      +  
Sbjct: 23 KCGIIFI-------RRSTLSRRKTPMC--EKCRKDSCQEAALNKDEGNESGKKTS 68

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.8 bits (109), Expect = 9e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
             +GE+PYSC    C + FS+++   +HQ+ H
Sbjct: 3  SGSSGEKPYSCA--ECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 15 CAKAFSRLENLKIHQRSHTGERPYSC 40
          C + FS    L  HQ+ HT +   S 
Sbjct: 16 CKETFSDNNRLVQHQKMHTVKSGPSS 41

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.9 bits (108), Expect = 4e-07
 Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 8/91 (8%)

Query: 7   FLCSQFPHCAKAFSRLENLKIHQRS--HTGERPYSCTYEG-CHKAFSNSSDRAKHQRTHF 63
           F C     C+ A+  L  L +H     H  +  +          +        + +    
Sbjct: 20  FRCKD---CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76

Query: 64  DTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH 94
             +  KCMY  C   +     L  H     H
Sbjct: 77  AQKVLKCMY--CGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.2 bits (101), Expect = 4e-06
 Identities = 11/81 (13%), Positives = 23/81 (28%), Gaps = 5/81 (6%)

Query: 20 SRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT--HFDTRPYKCMYKG-CT 76
          S   + K++    TG   + C    C  A+    +   H     H+    ++        
Sbjct: 2  SSGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKR 59

Query: 77 KRYTDPSSLRKHAKNHNHDHL 97
                 SL +     +   +
Sbjct: 60 WSKPRKRSLLEMEGKEDAQKV 80

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 43.5 bits (103), Expect = 6e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGER 36
          F+C     C +AF+R E+LK H RSHT E+
Sbjct: 3  FVC---EVCTRAFARQEHLKRHYRSHTNEK 29

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.5 bits (100), Expect = 1e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
             S  GE P+ C+   C + F+  +   +H+RTH
Sbjct: 3  SGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 34.8 bits (80), Expect = 9e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYS 39
          F CS+   C + F++   L  H+R+H  +   S
Sbjct: 13 FKCSK---CDRVFTQRNYLVQHERTHARKSGPS 42

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          RP+ CT+  C K F+ S +  +H+RTH
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 41.1 bits (97), Expect = 4e-06
 Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGER 36
          F+C+ + +C K F+R + L+ H+R+HTGE+
Sbjct: 3  FMCT-WSYCGKRFTRSDELQRHKRTHTGEK 31

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 40.4 bits (95), Expect = 7e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGER 36
           +C     C K + +  +L+ H R HTGER
Sbjct: 9  HICH-IQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 38.1 bits (89), Expect = 6e-05
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
            ++ + C  +GC K +  +S    H R H
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWH 33

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 7e-05
 Identities = 14/50 (28%), Positives = 18/50 (36%), Gaps = 4/50 (8%)

Query: 13  PHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
           P C   FS   +LK H R    E    C    C K F+++     H    
Sbjct: 78  PLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 16/80 (20%), Positives = 22/80 (27%), Gaps = 7/80 (8%)

Query: 15  CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG 74
                    +      +      + C    C   FS+S    +H R         C    
Sbjct: 52  HNPQLLDESSYLYRLLASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPV-- 105

Query: 75  CTKRYTDPSSLRKHA-KNHN 93
           C K +T   S   H  K HN
Sbjct: 106 CKKEFTSTDSALDHVCKKHN 125

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 9e-05
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 8/89 (8%)

Query: 14  HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYK 73
            C    S L     H+R         C Y  C   F +   + +H+    + +   C+  
Sbjct: 21  LCNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEHESKC-EYKKLTCLE- 74

Query: 74  GCTKRYTDPSSLRKHAKN-HNHDHLTPAK 101
            C + +    S+ +H    HN +++ P  
Sbjct: 75  -CMRTFKSSFSIWRHQVEVHNQNNMAPTS 102

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 37.3 bits (86), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFD 64
          +RPYSC + GC KAF  + D  +H+++H +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGER 36
          F C  FP C K F R  N++ H ++H  +R
Sbjct: 19 FEC-LFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 35.6 bits (82), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR 66
          ++ + C + GC K F    +   H +TH + R
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.83
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.73
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.65
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.62
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.61
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.58
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.52
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.52
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.51
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.48
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.48
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.48
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.47
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.46
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.42
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.41
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.4
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.39
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.38
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.38
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.36
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.33
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.31
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.29
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.28
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.23
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.18
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.17
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.17
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.16
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.16
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.15
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.12
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.1
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.08
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.03
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.01
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.0
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.97
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.96
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.94
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.94
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.89
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.87
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.8
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.8
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.76
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.72
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.66
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.65
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.6
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.59
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.59
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.58
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.58
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.57
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.5
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.49
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.47
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.44
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.44
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.36
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.31
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.29
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.26
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.25
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.24
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.23
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.22
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.21
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.21
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.17
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.17
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.16
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.15
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.15
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.39
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.37
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.08
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.07
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.05
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.31
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.98
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.98
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.94
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.91
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.13
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.11
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.01
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.58
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.29
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.1
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.03
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.96
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.66
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.51
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.15
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	85.76
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.39
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.0
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	83.89
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	83.0
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	80.81

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=1e-28  Score=180.61  Aligned_cols=140  Identities=29%  Similarity=0.582  Sum_probs=114.4

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChH
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS   83 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (196)
                      .++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.+...|..|++.|.++++|.|+.  |++.|....
T Consensus        47 ~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~  119 (190)
T 2i13_A           47 EKPYKCP---ECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLA  119 (190)
T ss_dssp             -CCEECT---TTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTT--TCCEESSHH
T ss_pred             CCCccCC---CcCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCC--CCCccCCHH
Confidence            4567776   58888888888888888888888888855  8888888888888888888888888877  888888888


Q ss_pred             HHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCCCCCCCcccccCCCcccccccchhheeeccc
Q psy9954          84 SLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDH  154 (196)
Q Consensus        84 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~h~~~~~~  154 (196)
                      .|..|+++|+++++|.|..|++.|.+...|..|++.|+++.+    +.|..|+..|.....|..|+..|.+
T Consensus       120 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~----~~C~~C~~~f~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          120 HLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP----YKCPECGKSFSRRDALNVHQRTHTG  186 (190)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC----EECTTTCCEESSHHHHHHHHTTC--
T ss_pred             HHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC----eECCCCCCccCCHHHHHHHHHhcCC
Confidence            888888888888888888888888888888888888877665    4777888888888888888877644

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=1.2e-27  Score=175.01  Aligned_cols=146  Identities=23%  Similarity=0.461  Sum_probs=113.9

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChH
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS   83 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (196)
                      .++|.|. |+.|++.|.....|..|+++|.++++|.|+.+.|++.|.+...|..|+++|.++++|.|+.+.|++.|.+..
T Consensus        10 ~~~~~C~-~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A           10 YKRYICS-FADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             CCCCBCS-STTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CcceeCC-CCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            4678885 557888888888888888888888888882223888888888888888888888888887112888888888


Q ss_pred             HHHHHh-hhc-CCCCCCcc--ccccccCCCCCCccccccccCCCCCCCCCccccc--CCCcccccccchhheeeccc
Q psy9954          84 SLRKHA-KNH-NHDHLTPA--KMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFS--CGEPNLLMESYELQTVTHDH  154 (196)
Q Consensus        84 ~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~~~h~~~~~~  154 (196)
                      .|..|+ +.| .++++|.|  ..|++.|.+...|..|++.|+++.++    .|..  |+..|.....|..|+..|..
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~----~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY----ECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSS----BCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCc----cCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            888888 455 35678888  77888888888888888888776654    5655  88888888888888877765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=2.2e-27  Score=173.57  Aligned_cols=141  Identities=21%  Similarity=0.400  Sum_probs=126.2

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHH-HHc-CCCCceee--ccCccCcc
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTH-FDTRPYKC--MYKGCTKR   78 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~~~C~~~   78 (196)
                      +.++|.|. |++|++.|.....|..|+++|.++++|.|..+.|++.|.+...|..|+ +.| .++++|.|  +.  |++.
T Consensus        39 ~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~--C~k~  115 (190)
T 1tf6_A           39 GEKPFPCK-EEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFEN--CGKA  115 (190)
T ss_dssp             CCCSSCCS-STTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSS--SCEE
T ss_pred             CCCCccCC-CCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCC--Cccc
Confidence            45788884 457999999999999999999999999996225999999999999999 567 46889999  77  9999


Q ss_pred             CCChHHHHHHhhhcCCCCCCcccc--ccccCCCCCCccccccccCCCCCCCCCccccc---CCCcccccccchhheeecc
Q psy9954          79 YTDPSSLRKHAKNHNHDHLTPAKM--RKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFS---CGEPNLLMESYELQTVTHD  153 (196)
Q Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~---c~~~~~~~~~~~~h~~~~~  153 (196)
                      |.+...|..|+++|+++++|.|..  |++.|.+...|..|++.|++       +.|..   |+..|.....|..|+..|+
T Consensus       116 f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-------~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          116 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-------YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             CSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-------CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-------CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            999999999999999999999988  99999999999999998876       45566   9999999999999988774

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=4e-27  Score=166.60  Aligned_cols=138  Identities=21%  Similarity=0.426  Sum_probs=122.8

Q ss_pred             CCcChhccCCHHHHHHHHH---hhCCCCceeeccccc---ccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHH
Q psy9954          12 FPHCAKAFSRLENLKIHQR---SHTGERPYSCTYEGC---HKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSL   85 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~---~h~~~~~~~C~~~~C---~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (196)
                      |+.|++.|.+...|..|++   +|.++++|.|.+.+|   ++.|.....|..|++.|.++++|.|++..|++.|.+...|
T Consensus         6 C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (155)
T 2gli_A            6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENL   85 (155)
T ss_dssp             BTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHH
T ss_pred             cCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHH
Confidence            5589999999999999998   688899999975233   5999999999999999999999999743599999999999


Q ss_pred             HHHhhhcCCCCCCcccc--ccccCCCCCCccccc-cccCCCCCCCCCccccc--CCCcccccccchhheeecc
Q psy9954          86 RKHAKNHNHDHLTPAKM--RKLNYAKPGDIVPSV-RNVNSSVPLNPDFTVFS--CGEPNLLMESYELQTVTHD  153 (196)
Q Consensus        86 ~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~~~~~~--c~~~~~~~~~~~~h~~~~~  153 (196)
                      ..|+++|+++++|.|..  |++.|.+...|..|+ +.|.++.+    +.|..  |+..|.....|..|+..|+
T Consensus        86 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~----~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           86 KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP----YVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC----EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC----eeCCCCCCccccCCHHHHHHHHHhhc
Confidence            99999999999999998  999999999999999 67766655    57766  9999999999999987764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=3.9e-27  Score=159.48  Aligned_cols=116  Identities=28%  Similarity=0.720  Sum_probs=107.5

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTD   81 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (196)
                      ++.++|.|. .+.|++.|.....|..|++.|.++++|.|.++.|++.|.....|..|++.|.++++|.|+.  |++.|..
T Consensus         2 ~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCA-YPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSR   78 (119)
T ss_dssp             CSSCCBCCC-STTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESC
T ss_pred             CCCeeeeCC-CCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCC
Confidence            467889997 3349999999999999999999999999963369999999999999999999999999988  9999999


Q ss_pred             hHHHHHHhhhcCCCCCCcc--ccccccCCCCCCcccccccc
Q psy9954          82 PSSLRKHAKNHNHDHLTPA--KMRKLNYAKPGDIVPSVRNV  120 (196)
Q Consensus        82 ~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  120 (196)
                      ...|..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        79 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           79 SDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999999  89999999999999999865

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.93  E-value=5.7e-28  Score=176.69  Aligned_cols=141  Identities=30%  Similarity=0.604  Sum_probs=118.2

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCCh
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDP   82 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (196)
                      +.++|.|.   +|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|...
T Consensus        18 ~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   90 (190)
T 2i13_A           18 GEKPYACP---ECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQR   90 (190)
T ss_dssp             ----------------CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCH
T ss_pred             CCCCCcCC---CCccccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCH
Confidence            45788887   69999999999999999999999999966  9999999999999999999999999988  99999999


Q ss_pred             HHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCCCCCCCcccccCCCcccccccchhheeeccc
Q psy9954          83 SSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTHDH  154 (196)
Q Consensus        83 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~h~~~~~~  154 (196)
                      ..|..|+++|+++++|.|..|++.|.+...|..|++.|+++.+    +.|..|+..|.....|..|+..|..
T Consensus        91 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----~~C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A           91 ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP----YKCPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             HHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCC----EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCC----eECCCCCcccCCHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999988776    4788899999999999999987754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=2.5e-26  Score=156.72  Aligned_cols=118  Identities=25%  Similarity=0.487  Sum_probs=104.9

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChH
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS   83 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (196)
                      .++|.|. ++.|++.|.+...|..|+++| ++++|.|.+  |++.|.+...|..|++.|.++++|.|.+..|++.|....
T Consensus         3 ~~~~~C~-~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            3 PRTIACP-HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             --CEECC-STTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCcccCC-CCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            4678887 557999999999999999999 889999966  999999999999999999999999996435999999999


Q ss_pred             HHHHHhhhcCCCCCCccc--cccccCCCCCCccccccccCCCCC
Q psy9954          84 SLRKHAKNHNHDHLTPAK--MRKLNYAKPGDIVPSVRNVNSSVP  125 (196)
Q Consensus        84 ~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~  125 (196)
                      .|..|+++|+++++|.|.  .|++.|.+..+|..|+++|+++.+
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            999999999999999995  599999999999999999987654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=3.1e-26  Score=156.07  Aligned_cols=115  Identities=22%  Similarity=0.460  Sum_probs=107.0

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHH---cCCCCceeeccCccCcc
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT---HFDTRPYKCMYKGCTKR   78 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~~~C~~~   78 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.+...|..|++.   +.++++|.|+.  |++.
T Consensus         3 ~~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~   75 (124)
T 2dlq_A            3 SGSSGVECP---TCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQET   75 (124)
T ss_dssp             CCCSSCCCT---TTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCE
T ss_pred             CCCCCCCCC---CCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCc
Confidence            466888888   69999999999999999999999999966  99999999999999985   57889999988  9999


Q ss_pred             CCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCC
Q psy9954          79 YTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSS  123 (196)
Q Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  123 (196)
                      |.....|..|+++|+++++|.|..|++.|.+...|..|++.+|+.
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           76 FRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             ESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            999999999999999999999999999999999999999876654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.2e-26  Score=162.81  Aligned_cols=120  Identities=30%  Similarity=0.633  Sum_probs=111.0

Q ss_pred             ccccccCC--CCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCC
Q psy9954           3 TIFDFLCS--QFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYT   80 (196)
Q Consensus         3 ~~~~~~C~--~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (196)
                      +.++|.|.  .|+.|++.|.....|..|+++|.++++|.|.++.|++.|.+...|..|++.|.++++|.|+..+|++.|.
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  110 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFS  110 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEES
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccC
Confidence            45789997  4788999999999999999999999999997546999999999999999999999999997545999999


Q ss_pred             ChHHHHHHh-hhcCCCCCCcccc--ccccCCCCCCccccccccCC
Q psy9954          81 DPSSLRKHA-KNHNHDHLTPAKM--RKLNYAKPGDIVPSVRNVNS  122 (196)
Q Consensus        81 ~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  122 (196)
                      +.+.|..|+ ++|.++++|.|..  |++.|.+...|..|++.+|+
T Consensus       111 ~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          111 NASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999 8999999999998  99999999999999998874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=1.8e-25  Score=154.48  Aligned_cols=102  Identities=25%  Similarity=0.506  Sum_probs=90.9

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTD   81 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.+...|..|+++|.+++||.|+.  |++.|..
T Consensus        18 ~Gek~y~C~---~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~   90 (133)
T 2lt7_A           18 DGRVYYICI---VCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFIN   90 (133)
T ss_dssp             TTEEEEEET---TTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESS
T ss_pred             CCCcCeECC---CCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCC--CCCCcCC
Confidence            567889998   69999999999999999999999999965  9999999999999999999999999988  9999999


Q ss_pred             hHHHHHHhhhcCCCC------CCccccccccCCCC
Q psy9954          82 PSSLRKHAKNHNHDH------LTPAKMRKLNYAKP  110 (196)
Q Consensus        82 ~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~  110 (196)
                      .+.|..|+++|++++      +|+|..|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999988654      57888998877543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=8e-25  Score=154.86  Aligned_cols=119  Identities=20%  Similarity=0.377  Sum_probs=107.1

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHh-hCCCCc--------eeecccccccccccchhHHHHHHHcCCCCceeeccCcc
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRS-HTGERP--------YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGC   75 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   75 (196)
                      .+|.|.   .|++.|.+...|..|++. |.++.+        |.|.+  |++.|.....|..|++.|.++++|.|.++.|
T Consensus        24 ~~~~C~---~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           24 LSRPKK---SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CSSSCC---CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             cccccc---cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            445555   799999999999999998 777654        78965  9999999999999999999999999965559


Q ss_pred             CccCCChHHHHHHhhhcCCCCCCcccc--ccccCCCCCCccccccccCCCCCCCC
Q psy9954          76 TKRYTDPSSLRKHAKNHNHDHLTPAKM--RKLNYAKPGDIVPSVRNVNSSVPLNP  128 (196)
Q Consensus        76 ~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~  128 (196)
                      ++.|.....|..|+++|+++++|.|..  |++.|.+...|..|++.|+++.++.+
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            999999999999999999999999997  99999999999999999998877543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=3.1e-25  Score=153.27  Aligned_cols=109  Identities=17%  Similarity=0.297  Sum_probs=95.9

Q ss_pred             HHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccc
Q psy9954          26 KIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKL  105 (196)
Q Consensus        26 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  105 (196)
                      ..|.++|.|+++|.|.+  |++.|.....|..|+++|.+++||+|+.  |++.|...+.|..|+++|.++++|.|+.|++
T Consensus        11 ~h~~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k   86 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACGK   86 (133)
T ss_dssp             SEEEEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             hhceeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCCCCC
Confidence            34456789999999966  9999999999999999999999999988  9999999999999999999999999999999


Q ss_pred             cCCCCCCccccccccCCCCCCCC--CcccccCCCc
Q psy9954         106 NYAKPGDIVPSVRNVNSSVPLNP--DFTVFSCGEP  138 (196)
Q Consensus       106 ~f~~~~~l~~H~~~~~~~~~~~~--~~~~~~c~~~  138 (196)
                      .|.+...|..|++.+|++.+...  .+.|..|+..
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~  121 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSL  121 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSS
T ss_pred             CcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCch
Confidence            99999999999999998876433  2345555543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=2.6e-23  Score=140.52  Aligned_cols=116  Identities=23%  Similarity=0.540  Sum_probs=104.9

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCC
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGD  112 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  112 (196)
                      .++++|.|.+++|++.|.+...|..|++.|.++++|.|++..|++.|.....|..|+++|+++++|.|..|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            57889999755699999999999999999999999999832499999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCccc--ccCCCcccccccchhheeec
Q psy9954         113 IVPSVRNVNSSVPLNPDFTV--FSCGEPNLLMESYELQTVTH  152 (196)
Q Consensus       113 l~~H~~~~~~~~~~~~~~~~--~~c~~~~~~~~~~~~h~~~~  152 (196)
                      |..|++.|+++.+    +.|  ..|+..|.....|..|+..|
T Consensus        82 l~~H~~~h~~~~~----~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKP----FSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCC----EECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCC----eeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999988766    466  78999999999999987654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=1.9e-21  Score=124.94  Aligned_cols=88  Identities=30%  Similarity=0.688  Sum_probs=79.0

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChH
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS   83 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (196)
                      .++|.|. ++.|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|...+
T Consensus         2 ~k~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   76 (90)
T 1a1h_A            2 ERPYACP-VESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSD   76 (90)
T ss_dssp             -CCEECC-SSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHH
T ss_pred             CCceECC-CCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHH
Confidence            4788887 3459999999999999999999999999965  9999999999999999999999999988  999999999


Q ss_pred             HHHHHhhhcCCCC
Q psy9954          84 SLRKHAKNHNHDH   96 (196)
Q Consensus        84 ~l~~H~~~h~~~~   96 (196)
                      .|..|+++|++++
T Consensus        77 ~l~~H~~~H~~~k   89 (90)
T 1a1h_A           77 ERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHGGGGC--
T ss_pred             HHHHHHHHhcccC
Confidence            9999999998765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=4.6e-21  Score=126.98  Aligned_cols=91  Identities=36%  Similarity=0.744  Sum_probs=78.6

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCCh
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDP   82 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (196)
                      ..++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|.++++|.|..  |++.|...
T Consensus        14 ~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   86 (106)
T 2ee8_A           14 TKKEFICK---FCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQS   86 (106)
T ss_dssp             CCCCCBCS---SSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSH
T ss_pred             CCcCeECC---CCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCH
Confidence            34677777   69999999999999999999888999965  9999999999999999999889999977  99999999


Q ss_pred             HHHHHHhhhcCCCCCCcc
Q psy9954          83 SSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        83 ~~l~~H~~~h~~~~~~~C  100 (196)
                      ..|..|+++|+++++|.+
T Consensus        87 ~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           87 RTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHhCCCCCCcC
Confidence            999999999988887754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=6.8e-21  Score=123.88  Aligned_cols=89  Identities=39%  Similarity=0.685  Sum_probs=78.2

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCCh
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDP   82 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (196)
                      +.++|.|.   +|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|...
T Consensus         5 ~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   77 (96)
T 2dmd_A            5 SSGPHKCE---VCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNS   77 (96)
T ss_dssp             CCCCCCBT---TTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSH
T ss_pred             CCcCeECC---CCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCH
Confidence            45778887   69999999999999999999999999965  9999999999999999999999999987  99999999


Q ss_pred             HHHHHHhhhcCCCCCC
Q psy9954          83 SSLRKHAKNHNHDHLT   98 (196)
Q Consensus        83 ~~l~~H~~~h~~~~~~   98 (196)
                      ..|..|+++|++++..
T Consensus        78 ~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           78 SQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHHHTTCCSCCCC
T ss_pred             HHHHHHHHHhcCCCCC
Confidence            9999999999887654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.83  E-value=1.6e-20  Score=122.98  Aligned_cols=89  Identities=35%  Similarity=0.823  Sum_probs=79.8

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCCh
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDP   82 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (196)
                      ..++|.|. ++.|++.|.....|..|+++|.++++|.|.++.|++.|.....|..|++.|.++++|.|+.  |++.|...
T Consensus        12 ~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   88 (100)
T 2ebt_A           12 KRRIHYCD-YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRS   88 (100)
T ss_dssp             SCCCEECC-SSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSH
T ss_pred             cCcceEcC-CCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCH
Confidence            45678888 5669999999999999999999999999964469999999999999999999999999988  99999999


Q ss_pred             HHHHHHhhhcCC
Q psy9954          83 SSLRKHAKNHNH   94 (196)
Q Consensus        83 ~~l~~H~~~h~~   94 (196)
                      ..|..|+++|++
T Consensus        89 ~~l~~H~~~H~~  100 (100)
T 2ebt_A           89 DHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCC
Confidence            999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.3e-21  Score=133.01  Aligned_cols=112  Identities=17%  Similarity=0.394  Sum_probs=102.7

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhh---cCCCCCCccccccccCCC
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKN---HNHDHLTPAKMRKLNYAK  109 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~  109 (196)
                      .++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|++.   +.++++|.|.+|++.|.+
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~   78 (124)
T 2dlq_A            3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRR   78 (124)
T ss_dssp             CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESS
T ss_pred             CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCC
Confidence            4678999965  9999999999999999999999999988  99999999999999985   567899999999999999


Q ss_pred             CCCccccccccCCCCCCCCCcccccCCCcccccccchhheeec
Q psy9954         110 PGDIVPSVRNVNSSVPLNPDFTVFSCGEPNLLMESYELQTVTH  152 (196)
Q Consensus       110 ~~~l~~H~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~h~~~~  152 (196)
                      ...|..|++.|+++.+    +.|..|+..|.....|..|+...
T Consensus        79 ~~~l~~H~~~h~~~~~----~~C~~C~~~f~~~~~l~~H~~~~  117 (124)
T 2dlq_A           79 RMELRLHMVSHTGEMP----YKCSSCSQQFMQKKDLQSHMIKL  117 (124)
T ss_dssp             HHHHHHHHHHHSSSCS----EECSSSCCEESSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCC----ccCCCccchhCCHHHHHHHHHHH
Confidence            9999999999988766    57888999999999999998743

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=4.4e-21  Score=124.77  Aligned_cols=91  Identities=24%  Similarity=0.430  Sum_probs=85.6

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPG  111 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  111 (196)
                      +.++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|+++++|.|.+|++.|.+..
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   78 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS   78 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHH
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHH
Confidence            46788999966  9999999999999999999999999988  9999999999999999999999999999999999999


Q ss_pred             CccccccccCCCCCC
Q psy9954         112 DIVPSVRNVNSSVPL  126 (196)
Q Consensus       112 ~l~~H~~~~~~~~~~  126 (196)
                      .|..|++.|+++...
T Consensus        79 ~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           79 QLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHHTTCCSCCCC
T ss_pred             HHHHHHHHhcCCCCC
Confidence            999999999887653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=1.5e-21  Score=125.51  Aligned_cols=89  Identities=22%  Similarity=0.524  Sum_probs=81.3

Q ss_pred             CCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCc
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDI  113 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  113 (196)
                      |+++|.|+++.|++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|+++++|.|..|++.|.+...|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHH
Confidence            468999974469999999999999999999999999988  999999999999999999999999999999999999999


Q ss_pred             cccccccCCCC
Q psy9954         114 VPSVRNVNSSV  124 (196)
Q Consensus       114 ~~H~~~~~~~~  124 (196)
                      ..|++.|+++.
T Consensus        79 ~~H~~~H~~~k   89 (90)
T 1a1h_A           79 KRHTKIHLRQK   89 (90)
T ss_dssp             HHHHGGGGC--
T ss_pred             HHHHHHhcccC
Confidence            99999988653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=2.6e-21  Score=131.70  Aligned_cols=114  Identities=22%  Similarity=0.373  Sum_probs=100.8

Q ss_pred             CCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcccc--ccccCCCCC
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKM--RKLNYAKPG  111 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~  111 (196)
                      ++++|.|+++.|++.|.+...|..|++.| ++++|.|..  |++.|.....|..|+++|+++++|.|..  |++.|.+..
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            35789997336999999999999999999 889999988  9999999999999999999999999986  999999999


Q ss_pred             CccccccccCCCCCCCCCccc--ccCCCcccccccchhheeeccc
Q psy9954         112 DIVPSVRNVNSSVPLNPDFTV--FSCGEPNLLMESYELQTVTHDH  154 (196)
Q Consensus       112 ~l~~H~~~~~~~~~~~~~~~~--~~c~~~~~~~~~~~~h~~~~~~  154 (196)
                      .|..|++.|+++.++    .|  ..|+..|.....|..|+..|..
T Consensus        79 ~l~~H~~~h~~~~~~----~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPY----VCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHHHHHHCCCCC----CCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHHHHHHhCCCCce----ECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            999999999987764    55  4699999999999999987754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.82  E-value=1.4e-20  Score=118.67  Aligned_cols=82  Identities=38%  Similarity=0.761  Sum_probs=76.1

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSL   85 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (196)
                      ||.|.   +|++.|.....|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|+.  |++.|...+.|
T Consensus         1 ~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCK---ICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNL   73 (82)
T ss_dssp             CEECS---SSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHH
T ss_pred             CccCC---CCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHH
Confidence            46666   79999999999999999999999999965  9999999999999999999999999988  99999999999


Q ss_pred             HHHhhhcCC
Q psy9954          86 RKHAKNHNH   94 (196)
Q Consensus        86 ~~H~~~h~~   94 (196)
                      ..|+++|++
T Consensus        74 ~~H~~~H~g   82 (82)
T 2kmk_A           74 ITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHhhCC
Confidence            999999864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=2.2e-20  Score=131.88  Aligned_cols=90  Identities=37%  Similarity=0.782  Sum_probs=83.8

Q ss_pred             CCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhh
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |++|++.|.....|..|+++|.++++|.|.++.|++.|.....|..|+++|.++++|.|.++.|++.|.....|.+|+++
T Consensus        65 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A           65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             CTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             CCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence            55899999999999999999999999999644599999999999999999999999999744599999999999999999


Q ss_pred             cCCCCCCccc
Q psy9954          92 HNHDHLTPAK  101 (196)
Q Consensus        92 h~~~~~~~C~  101 (196)
                      |+++++|.|.
T Consensus       145 H~~~k~~~c~  154 (155)
T 2rpc_A          145 HTSDKSGPSS  154 (155)
T ss_dssp             TTSCCCSCSC
T ss_pred             hcCCCCCCCC
Confidence            9999999985

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=2.1e-22  Score=135.44  Aligned_cols=99  Identities=13%  Similarity=0.186  Sum_probs=82.1

Q ss_pred             HHHHHHHHhhCCCCceeecccccccccccchhHHHHHHH--cCCCCce-eeccCccCccC--CChHHHHHHhhhcCCCCC
Q psy9954          23 ENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT--HFDTRPY-KCMYKGCTKRY--TDPSSLRKHAKNHNHDHL   97 (196)
Q Consensus        23 ~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~-~C~~~~C~~~f--~~~~~l~~H~~~h~~~~~   97 (196)
                      +.|..|+++|.++++|.|.+  |++.|.....|..|++.  |.+.+++ .|+.  |++.|  .....|..|+++|.++++
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             hhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcc
Confidence            45677888888888999955  99999999999999888  7666654 4877  88888  888888999888888889


Q ss_pred             CccccccccCCCCCCccccccccCCCCC
Q psy9954          98 TPAKMRKLNYAKPGDIVPSVRNVNSSVP  125 (196)
Q Consensus        98 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~  125 (196)
                      |.|.+|++.|.+...|..|++.++....
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            9999999999999999999888776543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=1.8e-20  Score=124.05  Aligned_cols=91  Identities=21%  Similarity=0.435  Sum_probs=85.5

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCC
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGD  112 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  112 (196)
                      ..+++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|+++++|.|..|++.|.+...
T Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           13 KTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             CCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHH
Confidence            4567899966  9999999999999999999999999988  99999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCC
Q psy9954         113 IVPSVRNVNSSVPLN  127 (196)
Q Consensus       113 l~~H~~~~~~~~~~~  127 (196)
                      |..|++.|+++.++.
T Consensus        89 L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           89 LAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHHTTSCCCCC
T ss_pred             HHHHHHHhCCCCCCc
Confidence            999999999887653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.4e-19  Score=117.43  Aligned_cols=87  Identities=33%  Similarity=0.673  Sum_probs=68.1

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCC--CceeeccCccCccC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT--RPYKCMYKGCTKRY   79 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~~~C~~~f   79 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|.++  ++|.|+.  |++.|
T Consensus         3 ~~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f   75 (95)
T 2yt9_A            3 SGSSGVACE---ICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGF   75 (95)
T ss_dssp             CCCSCEECS---SSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCB
T ss_pred             CCCCCeECC---CCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchh
Confidence            455677777   58888888888888888888888888855  888888888888888888776  7888877  88888


Q ss_pred             CChHHHHHHhh-hcCCC
Q psy9954          80 TDPSSLRKHAK-NHNHD   95 (196)
Q Consensus        80 ~~~~~l~~H~~-~h~~~   95 (196)
                      .+...|..|++ .|.++
T Consensus        76 ~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           76 SRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SSHHHHHHHHHHTSCCC
T ss_pred             CCHHHHHHHHHHhcCCC
Confidence            88888888875 56543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=7.8e-20  Score=121.33  Aligned_cols=90  Identities=20%  Similarity=0.478  Sum_probs=74.6

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTD   81 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.  ++|.|.+  |++.|.....|..|++ |.++++|.|+.  |++.|..
T Consensus        12 ~~~~~~~C~---~C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~   81 (107)
T 1wjp_A           12 ENKEVYQCR---LCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKS   81 (107)
T ss_dssp             CCCCCCBCT---TTCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSS
T ss_pred             CCCcCeECC---CCCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCC
Confidence            345678877   58899999999999988883  6888965  9999988888999985 88888899977  9999999


Q ss_pred             hHHHHHHhh-hcCCCCCCccc
Q psy9954          82 PSSLRKHAK-NHNHDHLTPAK  101 (196)
Q Consensus        82 ~~~l~~H~~-~h~~~~~~~C~  101 (196)
                      ...|..|++ .|.++++|.|.
T Consensus        82 ~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           82 SFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHHcCCCCCCCCC
Confidence            999999986 88888887764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.79  E-value=1.3e-19  Score=116.11  Aligned_cols=86  Identities=34%  Similarity=0.823  Sum_probs=77.6

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChH
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPS   83 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (196)
                      ..+|.|. .+.|++.|.....|..|++.|.++++|.|+++.|++.|.....|..|++.|.++++|.|+.  |++.|...+
T Consensus         3 ~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   79 (89)
T 2wbs_A            3 TATHTCD-YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSD   79 (89)
T ss_dssp             CCCEECC-STTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHH
T ss_pred             CCCeeCC-CCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHH
Confidence            4567887 3349999999999999999999999999964469999999999999999999999999988  999999999


Q ss_pred             HHHHHhhhc
Q psy9954          84 SLRKHAKNH   92 (196)
Q Consensus        84 ~l~~H~~~h   92 (196)
                      .|..|+++|
T Consensus        80 ~l~~H~~~H   88 (89)
T 2wbs_A           80 HLALHMKRH   88 (89)
T ss_dssp             HHHHHGGGG
T ss_pred             HHHHHHHhh
Confidence            999999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.3e-19  Score=120.71  Aligned_cols=85  Identities=29%  Similarity=0.607  Sum_probs=64.3

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTD   81 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (196)
                      ++.++|.| .   |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|..
T Consensus         6 ~~~k~~~C-~---C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~   77 (110)
T 2csh_A            6 SGDKLYPC-Q---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMW   77 (110)
T ss_dssp             CCCCCEEC-T---TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESC
T ss_pred             CCCCCEec-c---CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcC
Confidence            45567777 4   7778887778888877777777788854  8888877778888877777777788866  8888888


Q ss_pred             hHHHHHHhhhcCC
Q psy9954          82 PSSLRKHAKNHNH   94 (196)
Q Consensus        82 ~~~l~~H~~~h~~   94 (196)
                      ...|..|+++|+.
T Consensus        78 ~~~l~~H~~~~~~   90 (110)
T 2csh_A           78 RDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccc
Confidence            8888888777653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=5.3e-20  Score=119.36  Aligned_cols=87  Identities=20%  Similarity=0.486  Sum_probs=80.7

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCC--CCCccccccccCCCC
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD--HLTPAKMRKLNYAKP  110 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~  110 (196)
                      .++++|.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|+++  ++|.|..|++.|.+.
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~   78 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRP   78 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSH
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCH
Confidence            5678999966  9999999999999999999999999988  999999999999999999987  899999999999999


Q ss_pred             CCccccccccCCC
Q psy9954         111 GDIVPSVRNVNSS  123 (196)
Q Consensus       111 ~~l~~H~~~~~~~  123 (196)
                      ..|..|++..|..
T Consensus        79 ~~L~~H~~~~H~~   91 (95)
T 2yt9_A           79 DHLNGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHHHHTSCC
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999755543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.9e-20  Score=123.97  Aligned_cols=88  Identities=25%  Similarity=0.481  Sum_probs=83.8

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKP  110 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  110 (196)
                      .|.++++|.| .  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|+++++|.|..|++.|.+.
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            4789999999 7  9999999999999999999999999988  999999999999999999999999999999999999


Q ss_pred             CCccccccccCCC
Q psy9954         111 GDIVPSVRNVNSS  123 (196)
Q Consensus       111 ~~l~~H~~~~~~~  123 (196)
                      ..|..|++.++..
T Consensus        79 ~~l~~H~~~~~~~   91 (110)
T 2csh_A           79 DSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccc
Confidence            9999999987753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.78  E-value=7.4e-20  Score=119.74  Aligned_cols=88  Identities=25%  Similarity=0.574  Sum_probs=81.5

Q ss_pred             CCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCc
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDI  113 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  113 (196)
                      ..++|.|.++.|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|+++++|.|..|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            35689998667999999999999999999999999996334999999999999999999999999999999999999999


Q ss_pred             cccccccC
Q psy9954         114 VPSVRNVN  121 (196)
Q Consensus       114 ~~H~~~~~  121 (196)
                      ..|+++|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=2.2e-20  Score=117.79  Aligned_cols=82  Identities=28%  Similarity=0.611  Sum_probs=77.7

Q ss_pred             ceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcccc
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPS  116 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  116 (196)
                      ||.|.+  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|+++++|.|..|++.|.+...|..|
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHH
Confidence            689966  9999999999999999999999999988  999999999999999999999999999999999999999999


Q ss_pred             ccccCC
Q psy9954         117 VRNVNS  122 (196)
Q Consensus       117 ~~~~~~  122 (196)
                      ++.|++
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            998763

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.5e-20  Score=123.77  Aligned_cols=92  Identities=15%  Similarity=0.238  Sum_probs=83.3

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccC
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNY  107 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  107 (196)
                      ++++|.++++|.|.+  |++.|.....|..|++.|  +++|.|..  |++.|.....|..|++ |.++++|.|..|++.|
T Consensus         7 ~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f   79 (107)
T 1wjp_A            7 GASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLECMRTF   79 (107)
T ss_dssp             CCCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEEC
T ss_pred             cCcccCCCcCeECCC--CCCccCCHHHHHHHHHHC--CCCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCccccchh
Confidence            456789999999966  999999999999999998  47999988  9999999999999996 9999999999999999


Q ss_pred             CCCCCcccccc-ccCCCCCC
Q psy9954         108 AKPGDIVPSVR-NVNSSVPL  126 (196)
Q Consensus       108 ~~~~~l~~H~~-~~~~~~~~  126 (196)
                      .+...|..|++ .|.++.++
T Consensus        80 ~~~~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           80 KSSFSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             SSHHHHHHHHHHTSCCCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCC
Confidence            99999999998 66555554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=1.1e-19  Score=116.39  Aligned_cols=86  Identities=22%  Similarity=0.551  Sum_probs=80.0

Q ss_pred             CCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcc
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIV  114 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  114 (196)
                      ..+|.|.+++|++.|.....|..|++.|.++++|.|++..|++.|.....|..|+++|+++++|.|..|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799976679999999999999999999999999963349999999999999999999999999999999999999999


Q ss_pred             cccccc
Q psy9954         115 PSVRNV  120 (196)
Q Consensus       115 ~H~~~~  120 (196)
                      .|++.|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=5.9e-19  Score=110.53  Aligned_cols=75  Identities=28%  Similarity=0.604  Sum_probs=52.4

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHH-hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQR-SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRY   79 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   79 (196)
                      ++.++|.|. |+.|++.|.+...|..|++ .|.++++|.|.++.|++.|.....|.+|+++|.++++|.|+.  |++.|
T Consensus         3 ~~~~~~~C~-~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCD-FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF--SGPSS   78 (79)
T ss_dssp             SCCSSEECS-STTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS--SSCCC
T ss_pred             CCCCCccCC-CCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC--CCCCC
Confidence            345667776 6667777777777777777 577777777743337777777777777777777777777766  77766

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=4.2e-19  Score=119.19  Aligned_cols=93  Identities=19%  Similarity=0.353  Sum_probs=82.0

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHh--hCCCCcee-eccccccccc--ccchhHHHHHHHcCCCCceeeccCccC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRS--HTGERPYS-CTYEGCHKAF--SNSSDRAKHQRTHFDTRPYKCMYKGCT   76 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~-C~~~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~~~C~   76 (196)
                      ++.++|.|.   +|++.|.....|..|+++  |.+.+++. |.+  |++.|  .....|..|+++|.++++|.|+.  |+
T Consensus        15 ~~~~~~~C~---~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~--C~   87 (115)
T 2dmi_A           15 TGASKFRCK---DCSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCMY--CG   87 (115)
T ss_dssp             CCCCSEEBS---SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCSS--SC
T ss_pred             CCCCCEECC---ccCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECCC--CC
Confidence            456889998   699999999999999999  77777655 965  99998  99999999999999999999988  99


Q ss_pred             ccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          77 KRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        77 ~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      +.|.....|..|+++|+......++
T Consensus        88 k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           88 HSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CccCCHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999998877655443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.1e-18  Score=107.99  Aligned_cols=76  Identities=21%  Similarity=0.473  Sum_probs=70.3

Q ss_pred             CCCCceeecccccccccccchhHHHHHH-HcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCC
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYA  108 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  108 (196)
                      +++++|.|.++.|++.|.....|..|++ .|.++++|.|+.+.|++.|.....|..|+++|+++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            5678999987789999999999999999 799999999965559999999999999999999999999999999883

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.73  E-value=2.3e-18  Score=102.06  Aligned_cols=57  Identities=35%  Similarity=0.815  Sum_probs=32.4

Q ss_pred             CCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |+||.|.+  |++.|.....|..|+++|++++||.|..  |++.|...+.|..|+++|+++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCC
Confidence            45555533  5555555555555555555555555554  555555555555555555544

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.73  E-value=5e-18  Score=107.52  Aligned_cols=84  Identities=36%  Similarity=0.671  Sum_probs=72.7

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCc-cCccCCChHH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKG-CTKRYTDPSS   84 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~-C~~~f~~~~~   84 (196)
                      ||.|. ++.|++.|.....|..|+++|.++++|.|++++|++.|.....|.+|+++|.+   |.|..+. |++.|...+.
T Consensus         1 p~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCH-FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECC-STTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCC-CCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            57772 24799999999999999999999999999544499999999999999999987   9995433 9999999999


Q ss_pred             HHHHhhhcC
Q psy9954          85 LRKHAKNHN   93 (196)
Q Consensus        85 l~~H~~~h~   93 (196)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=3.7e-18  Score=108.47  Aligned_cols=79  Identities=25%  Similarity=0.466  Sum_probs=72.3

Q ss_pred             HHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCC----CceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          25 LKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT----RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        25 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |..|+++|.++++|.|.+  |++.|.....|.+|++.|+..    ++|.|..  |++.|.....|..|+++|++++++.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             TTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             cccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCccc
Confidence            567999999999999966  999999999999999887665    7899988  99999999999999999999999999


Q ss_pred             ccccccC
Q psy9954         101 KMRKLNY  107 (196)
Q Consensus       101 ~~C~~~f  107 (196)
                      ..|+..|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            9998764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=6.1e-18  Score=100.18  Aligned_cols=58  Identities=33%  Similarity=0.689  Sum_probs=54.0

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCC
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR   66 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   66 (196)
                      .+||.|.   +||+.|...+.|..|+++|++++||.|..  |++.|.....|..|+++|++++
T Consensus         2 EKpy~C~---~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN---FCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT---TTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC---CCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            4799999   59999999999999999999999999965  9999999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=1.6e-18  Score=110.90  Aligned_cols=81  Identities=27%  Similarity=0.549  Sum_probs=68.8

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHH
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSS   84 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   84 (196)
                      +||.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|++ .+|.|+.  |++.|.....
T Consensus         2 k~~~C~---~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~--C~~~f~~~~~   73 (88)
T 1llm_C            2 KPFQCR---ICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDK--VEELLSKNYH   73 (88)
T ss_dssp             CCEECT---TTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHH--HHHHHHHHHH
T ss_pred             CCCcCC---CCCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHH--HHHHHHHHhh
Confidence            577777   58999999999999999998888999955  99999999999999888774 6888977  9999999999


Q ss_pred             HHHHhhhcC
Q psy9954          85 LRKHAKNHN   93 (196)
Q Consensus        85 l~~H~~~h~   93 (196)
                      |..|++.++
T Consensus        74 L~~H~~~~h   82 (88)
T 1llm_C           74 LENEVARLK   82 (88)
T ss_dssp             HHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            999987644

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=2.1e-19  Score=115.06  Aligned_cols=84  Identities=19%  Similarity=0.413  Sum_probs=78.4

Q ss_pred             CCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcc
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIV  114 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  114 (196)
                      ++||.|.+  |++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++ .+|.|..|++.|.+..+|.
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~   75 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLE   75 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhH
Confidence            57899966  9999999999999999999999999988  99999999999999999885 7899999999999999999


Q ss_pred             ccccccCCC
Q psy9954         115 PSVRNVNSS  123 (196)
Q Consensus       115 ~H~~~~~~~  123 (196)
                      .|++.+|..
T Consensus        76 ~H~~~~h~~   84 (88)
T 1llm_C           76 NEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987754

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=3e-18  Score=108.53  Aligned_cols=82  Identities=32%  Similarity=0.550  Sum_probs=74.8

Q ss_pred             ceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcccc---ccccCCCCCCc
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKM---RKLNYAKPGDI  113 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  113 (196)
                      ||.|.++.|++.|.....|..|+++|.++++|+|+.++|++.|.....|..|+++|++   |.|..   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6899444499999999999999999999999999555599999999999999999988   99999   99999999999


Q ss_pred             cccccccC
Q psy9954         114 VPSVRNVN  121 (196)
Q Consensus       114 ~~H~~~~~  121 (196)
                      ..|++.||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998775

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.4e-17  Score=108.70  Aligned_cols=81  Identities=16%  Similarity=0.210  Sum_probs=69.8

Q ss_pred             hccCCHHHHHHHHHhhCCCCceeecccccccccc-cchhHHHHHHHcCC-CCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          17 KAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFS-NSSDRAKHQRTHFD-TRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        17 k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      ..+.....+..|+++|.++++|.|.+  |++.|. ....|.+|+++|.+ +++|.|.+  |++.|.....|.+|+++|++
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcC
Confidence            34556667788999999999999965  999999 99999999999988 88999988  99999999999999999998


Q ss_pred             CCCCccc
Q psy9954          95 DHLTPAK  101 (196)
Q Consensus        95 ~~~~~C~  101 (196)
                      ++++...
T Consensus        80 ~kp~~~~   86 (98)
T 2gqj_A           80 AKPSDAE   86 (98)
T ss_dssp             SCSSCCC
T ss_pred             CCCCCCC
Confidence            8875543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.9e-16  Score=98.59  Aligned_cols=66  Identities=38%  Similarity=0.671  Sum_probs=54.0

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      .+.++++|.|.+  |++.|.....|.+|+++|.++++|.|+.  |++.|.....|..|+++|+++++|.|
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            355677888855  8888888888888888888888888877  88888888888888888888888876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.64  E-value=3.6e-18  Score=116.92  Aligned_cols=114  Identities=12%  Similarity=0.150  Sum_probs=86.6

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccc------cchhHHHHHHHcCCCCceeeccCcc
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFS------NSSDRAKHQRTHFDTRPYKCMYKGC   75 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~~~C   75 (196)
                      +++++|.|. +..+...|.....+..|.. ...++.+.|.+  |++.|.      ....|..|+ .|.+++||.|+.  |
T Consensus         8 ~~~k~~~~~-~k~~~~~~s~ee~~~~~~l-~~~~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~--C   80 (129)
T 2wbt_A            8 SGSKKYLSN-HKGIFIHVTLEELKRYHQL-TPEQKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL--C   80 (129)
T ss_dssp             TTCCGGGGC-SSCEEEECCHHHHHHHTTS-CHHHHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--T
T ss_pred             ccccccccc-cCCeeeeecHHhhhccccC-ChhhCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--C
Confidence            467899887 4455555543332222221 22345678865  877665      556666666 588899999988  9


Q ss_pred             CccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCC
Q psy9954          76 TKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSV  124 (196)
Q Consensus        76 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  124 (196)
                      ++.|.....|..|+++|  +++|.|..|++.|.+..+|..|++.|++..
T Consensus        81 ~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           81 LMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            99999999999999998  889999999999999999999999998753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.3e-16  Score=101.83  Aligned_cols=79  Identities=16%  Similarity=0.248  Sum_probs=68.9

Q ss_pred             hhccCCHHHHHHHHHhhCCCCceeeccccccccc-ccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHH-hhhcC
Q psy9954          16 AKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAF-SNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKH-AKNHN   93 (196)
Q Consensus        16 ~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~   93 (196)
                      ...|.....|..|++.|.++++|.|..  |++.| .....|..|+++| ++++|.|..  |++.|.....|..| +++|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcC
Confidence            356777888999999999999999955  99999 8999999999999 999999988  99999999999999 88887


Q ss_pred             CCCCCc
Q psy9954          94 HDHLTP   99 (196)
Q Consensus        94 ~~~~~~   99 (196)
                      ++..+.
T Consensus        88 ~~p~~~   93 (96)
T 2ctd_A           88 SLPSGP   93 (96)
T ss_dssp             CCSSCS
T ss_pred             CCCCCC
Confidence            655443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.9e-16  Score=97.16  Aligned_cols=64  Identities=38%  Similarity=0.714  Sum_probs=59.6

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|
T Consensus        14 ~~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCD---ECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCS---SSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECC---CCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            346788888   69999999999999999999999999966  99999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=2e-17  Score=108.02  Aligned_cols=79  Identities=11%  Similarity=0.138  Sum_probs=72.6

Q ss_pred             cccccchhHHHHHHHcCCCCceeeccCccCccCC-ChHHHHHHhhhcCC-CCCCccccccccCCCCCCccccccccCCCC
Q psy9954          47 KAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYT-DPSSLRKHAKNHNH-DHLTPAKMRKLNYAKPGDIVPSVRNVNSSV  124 (196)
Q Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  124 (196)
                      ..+.....+..|+++|.++++|.|..  |++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|++.|+++.
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            45667778899999999999999988  999999 99999999999998 999999999999999999999999999887


Q ss_pred             CCC
Q psy9954         125 PLN  127 (196)
Q Consensus       125 ~~~  127 (196)
                      +..
T Consensus        82 p~~   84 (98)
T 2gqj_A           82 PSD   84 (98)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            643

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=8.6e-16  Score=100.68  Aligned_cols=68  Identities=24%  Similarity=0.327  Sum_probs=54.2

Q ss_pred             CCCCceeecccccccccccchhHHHHHH-Hc---CCCCceeeccCccCccCCChHHHHHH-hhhcCCCCCCcccccc
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQR-TH---FDTRPYKCMYKGCTKRYTDPSSLRKH-AKNHNHDHLTPAKMRK  104 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~  104 (196)
                      .|++||.|..  |++.|.....|..|++ .|   .+++||.|..  |++.|...+.|..| +++|+++++|.|.++.
T Consensus        14 ~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            5677888854  8888888888888886 47   5678888877  88888888888888 7888888888887644

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.5e-15  Score=99.56  Aligned_cols=66  Identities=17%  Similarity=0.288  Sum_probs=60.5

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHH-hh---CCCCceeecccccccccccchhHHHH-HHHcCCCCceeecc
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQR-SH---TGERPYSCTYEGCHKAFSNSSDRAKH-QRTHFDTRPYKCMY   72 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~   72 (196)
                      ++.+||.|.   .|++.|...+.|..|++ .|   .+++||.|..  |++.|.....|..| +++|.+++||.|..
T Consensus        14 ~gekpy~C~---~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECK---YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECS---SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCC---CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            577899998   69999999999999998 48   5689999965  99999999999999 89999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=94.08  Aligned_cols=64  Identities=25%  Similarity=0.706  Sum_probs=46.5

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLT   98 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (196)
                      .+.++++|.|..  |++.|.....|..|++.|.++++|+|..  |++.|.....|.+|+++|+++++|
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            355667777744  7777777777777777777777777766  777777777777777777777654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=2.1e-15  Score=93.12  Aligned_cols=62  Identities=32%  Similarity=0.716  Sum_probs=57.6

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCce
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY   68 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   68 (196)
                      ++.++|.|.   .|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||
T Consensus        13 ~~~~~~~C~---~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCD---RCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCT---TSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECC---CCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            456789888   69999999999999999999999999966  999999999999999999999886

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.7e-15  Score=92.52  Aligned_cols=63  Identities=32%  Similarity=0.605  Sum_probs=48.1

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLT   98 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (196)
                      |.++++|.|.+  |++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|+++++.
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            56677788854  8888888888888887777777888876  888888888888888777776653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=6.6e-16  Score=105.57  Aligned_cols=75  Identities=19%  Similarity=0.278  Sum_probs=66.3

Q ss_pred             cChhcc------CCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHH
Q psy9954          14 HCAKAF------SRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRK   87 (196)
Q Consensus        14 ~C~k~f------~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   87 (196)
                      +|++.|      .....|..|+ .|++++||.|.+  |++.|.....|..|+++|  ++||.|+.  |++.|...+.|.+
T Consensus        46 ~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~  118 (129)
T 2wbt_A           46 IVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALD  118 (129)
T ss_dssp             HHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHH
T ss_pred             hhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHH
Confidence            566555      4677788887 588899999966  999999999999999999  88999988  9999999999999


Q ss_pred             HhhhcCCC
Q psy9954          88 HAKNHNHD   95 (196)
Q Consensus        88 H~~~h~~~   95 (196)
                      |+++|+++
T Consensus       119 H~~~h~~~  126 (129)
T 2wbt_A          119 HVCKKHNI  126 (129)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHHCCc
Confidence            99999876

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=5.7e-16  Score=96.41  Aligned_cols=67  Identities=27%  Similarity=0.550  Sum_probs=55.8

Q ss_pred             HHHHHHhhCCCCceeecccccccccccchhHHHHHH-HcCCC-CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          25 LKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDT-RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        25 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.+|+++|.++++|.|.+  |++.|.....|..|++ .|.++ ++|+|+.  |++.|.....|..|++++++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence            446888899999999965  9999999999999987 57664 7899977  999999999999999876654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2e-15  Score=92.70  Aligned_cols=64  Identities=42%  Similarity=0.798  Sum_probs=54.5

Q ss_pred             HHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        29 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      .++|.++++|.|.+  |++.|.....|..|++.|.++++|+|+.  |++.|.....|.+|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            45688888999965  9999999999999998898888999977  9999999999999998887653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.9e-16  Score=97.74  Aligned_cols=70  Identities=21%  Similarity=0.390  Sum_probs=62.9

Q ss_pred             hHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhh-hcCCC-CCCccccccccCCCCCCccccccccCCCCC
Q psy9954          54 DRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHD-HLTPAKMRKLNYAKPGDIVPSVRNVNSSVP  125 (196)
Q Consensus        54 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  125 (196)
                      +|.+|+++|.++++|.|+.  |++.|.....|..|++ .|.++ ++|.|..|++.|.+...|..|++.+|....
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            3567999999999999988  9999999999999997 67664 899999999999999999999999887654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.4e-15  Score=97.69  Aligned_cols=74  Identities=15%  Similarity=0.147  Sum_probs=67.7

Q ss_pred             ccccccchhHHHHHHHcCCCCceeeccCccCccC-CChHHHHHHhhhcCCCCCCccccccccCCCCCCcccc-ccccCC
Q psy9954          46 HKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRY-TDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPS-VRNVNS  122 (196)
Q Consensus        46 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~  122 (196)
                      ...|.....|..|++.|.++++|.|+.  |++.| .....|..|+++| ++++|.|.+|++.|.....|..| ++.|.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            346778889999999999999999988  99999 9999999999999 99999999999999999999999 766653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=5.3e-15  Score=89.12  Aligned_cols=61  Identities=26%  Similarity=0.622  Sum_probs=52.0

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHH-c-CCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT-H-FDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      ++|.++++|.|..  |++.|.....|..|++. | .++++|.|+.  |++.|...+.|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            5688888999955  99999999999999887 6 5788999977  99999999999999988775

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.1e-14  Score=90.90  Aligned_cols=71  Identities=21%  Similarity=0.383  Sum_probs=63.6

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCC----CceeecccccccccccchhHHHHHHHcCCCCceeeccCccCc
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGE----RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTK   77 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   77 (196)
                      ++.++|.|.   +|++.|.....|..|++.|.+.    ++|.|.+  |++.|.....|..|+++|.+++++.|..  |+.
T Consensus        11 ~~~k~~~C~---~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~--~~~   83 (86)
T 1x6h_A           11 TGEKPYACS---HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGEN--SGP   83 (86)
T ss_dssp             CCCCCEECS---SSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCCC--CCC
T ss_pred             cCCCCCcCC---CCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccCC--CCC
Confidence            356889988   6999999999999999987765    7899965  9999999999999999999999999977  987


Q ss_pred             cC
Q psy9954          78 RY   79 (196)
Q Consensus        78 ~f   79 (196)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=8.7e-15  Score=92.67  Aligned_cols=62  Identities=18%  Similarity=0.481  Sum_probs=49.0

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhh-hcCCC
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHD   95 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~   95 (196)
                      ..+...++|.|++  |++.|.+...|.+|+++|++++||+|..  |++.|.....|.+|++ .|.++
T Consensus        21 ~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            3455667788855  8888888888888888888888888877  8888888888888864 56554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=9.8e-15  Score=89.05  Aligned_cols=62  Identities=27%  Similarity=0.525  Sum_probs=57.1

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCce
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY   68 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   68 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|++.|++++|.
T Consensus         5 ~~~~~~~C~---~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCS---ECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECS---SSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECC---CCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            456889988   69999999999999999999999999966  999999999999999999988774

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=5e-15  Score=91.05  Aligned_cols=68  Identities=26%  Similarity=0.658  Sum_probs=55.7

Q ss_pred             HHHHHHH-hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          24 NLKIHQR-SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        24 ~L~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      .|..|+. +|.++++|.|+++.|++.|.....|..|++.|.++++|.|+.  |++.|.....|.+|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            3444544 478889999964469999999999999999999999999988  9999999999999998874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=2.6e-17  Score=101.23  Aligned_cols=70  Identities=20%  Similarity=0.343  Sum_probs=46.6

Q ss_pred             HHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcccc
Q psy9954          23 ENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKM  102 (196)
Q Consensus        23 ~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  102 (196)
                      ..|..|+++|.++++|.|.+  |++.|.....|..       +++|.|+.  |++.|.....|..|+++|+++++|.|.+
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            34556666677777777744  7777766666654       56677766  7777777777777777776666776666


Q ss_pred             c
Q psy9954         103 R  103 (196)
Q Consensus       103 C  103 (196)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=8.6e-15  Score=85.52  Aligned_cols=46  Identities=39%  Similarity=0.759  Sum_probs=22.3

Q ss_pred             ChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHc
Q psy9954          15 CAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        15 C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      |++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|
T Consensus        10 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C           10 CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHH
T ss_pred             CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHh
Confidence            4455555555555544444444455432  444444444444444443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.48  E-value=4.5e-14  Score=82.40  Aligned_cols=50  Identities=34%  Similarity=0.694  Sum_probs=28.0

Q ss_pred             cChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      +|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|.++
T Consensus         6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            6 ECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence            45555555555555555555555555533  555555555555555555444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.48  E-value=5.1e-14  Score=82.14  Aligned_cols=56  Identities=38%  Similarity=0.716  Sum_probs=52.8

Q ss_pred             ceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      ||.|.+  |++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            689965  9999999999999999999999999988  9999999999999999998875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.4e-14  Score=87.09  Aligned_cols=60  Identities=47%  Similarity=0.728  Sum_probs=55.0

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR   66 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   66 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|.++.
T Consensus        10 ~~~k~~~C~---~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           10 SGEKPYGCV---ECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTCCCEECS---SSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCccCC---CCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            456889988   69999999999999999999999999966  9999999999999999998764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.47  E-value=4.5e-14  Score=82.38  Aligned_cols=57  Identities=35%  Similarity=0.700  Sum_probs=49.9

Q ss_pred             CCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |+++|.|.+  |++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            468999965  9999999999999999999999999988  99999999999999998873

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=4.5e-14  Score=89.35  Aligned_cols=58  Identities=22%  Similarity=0.456  Sum_probs=51.2

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHH-HcCCCC
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTR   66 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~   66 (196)
                      .++|.|.   +||+.|.+...|..|+++|++++||.|.+  |++.|.....|.+|++ .|.++.
T Consensus        26 ~~~h~C~---~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCP---VCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECT---TSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECC---CCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            3566666   79999999999999999999999999966  9999999999999974 687664

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=5.6e-14  Score=87.42  Aligned_cols=62  Identities=26%  Similarity=0.539  Sum_probs=46.3

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCC---CCceeeccCccCccCCChHHHHHHhh-hcCCCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFD---TRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHDHL   97 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~   97 (196)
                      |.++++|.|.+  |++.|.....|..|++.|.+   +++|.|..  |++.|.....|.+|++ .|.++++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            67778888855  88888888888888887774   67888877  8888888888888874 4444443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=89.33  Aligned_cols=56  Identities=23%  Similarity=0.385  Sum_probs=27.8

Q ss_pred             CcChhccCCHHHHHHHHHh-hCCCCc--------eeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          13 PHCAKAFSRLENLKIHQRS-HTGERP--------YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        13 ~~C~k~f~~~~~L~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      +.|++.|.....|..|+++ |.++++        |.|..  |++.|.....|..|+++|++++||.|
T Consensus        29 ~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             cccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            3566666666666666655 555544        44422  44444444444444444444444444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.5e-13  Score=80.06  Aligned_cols=44  Identities=45%  Similarity=0.886  Sum_probs=22.4

Q ss_pred             cChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHH
Q psy9954          14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQ   59 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   59 (196)
                      +|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+
T Consensus         7 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            7 VCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHA   50 (60)
T ss_dssp             TTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHH
T ss_pred             CCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHH
Confidence            35555555555555555555555555533  555555555555553

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3e-13  Score=79.69  Aligned_cols=56  Identities=32%  Similarity=0.754  Sum_probs=51.3

Q ss_pred             CceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHh-hhcCCC
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHA-KNHNHD   95 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~   95 (196)
                      +||.|..  |++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            5799965  9999999999999999999999999988  999999999999997 577654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.6e-13  Score=83.19  Aligned_cols=59  Identities=36%  Similarity=0.752  Sum_probs=52.8

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHF   63 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   63 (196)
                      ++.++|.|. ++.|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|+
T Consensus        15 ~~~~~~~C~-~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           15 PKMRPYACP-VESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCEECS-STTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCc-CCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            456889996 3359999999999999999999999999965  9999999999999999874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.4e-13  Score=80.53  Aligned_cols=58  Identities=19%  Similarity=0.564  Sum_probs=52.2

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHh-h-CCCCceeecccccccccccchhHHHHHHHcCC
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRS-H-TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~-h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      ++.++|.|.   .|++.|.....|..|++. | .++++|.|++  |++.|.....|..|++.|++
T Consensus         6 ~~~k~~~C~---~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCK---VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECT---TTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECC---CCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            356889998   699999999999999998 7 5899999965  99999999999999998765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.38  E-value=5.4e-13  Score=81.58  Aligned_cols=60  Identities=33%  Similarity=0.764  Sum_probs=37.6

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhc
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      ...++|.|.+++|++.|.....|..|++.|.++++|+|.++.|++.|.....|.+|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345566664444666666666666666666666666664223667776666666666654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.1e-13  Score=83.47  Aligned_cols=64  Identities=22%  Similarity=0.404  Sum_probs=55.9

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCC---CCceeecccccccccccchhHHHHHH-HcCCCCceee
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTG---ERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTRPYKC   70 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C   70 (196)
                      ++.++|.|.   +|++.|.....|..|+++|.+   +++|.|.+  |++.|.....|.+|++ .|.++++...
T Consensus         3 ~~~k~~~C~---~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            3 SGSSGLQCE---ICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CSCCCEECS---SSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCcCeECC---CCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            567899998   699999999999999999986   89999966  9999999999999994 5777766543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.36  E-value=5.6e-13  Score=81.51  Aligned_cols=60  Identities=42%  Similarity=0.972  Sum_probs=52.4

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHc
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      +..++|.|. .+.|++.|.....|..|+++|.++++|.|.++.|++.|.....|.+|+++|
T Consensus        13 ~~~~~~~C~-~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICS-HPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECS-STTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCC-CCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345788887 334999999999999999999999999996446999999999999999865

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.2e-14  Score=87.92  Aligned_cols=68  Identities=16%  Similarity=0.247  Sum_probs=60.9

Q ss_pred             cchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCCCCC
Q psy9954          51 NSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVPLN  127 (196)
Q Consensus        51 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  127 (196)
                      +...|..|+++|.++++|.|+.  |++.|.....|..       +++|.|..|++.|.+...|..|++.|+++.++.
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             cchhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCC
Confidence            3567888999999999999988  9999999988876       789999999999999999999999998877653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=7e-13  Score=85.42  Aligned_cols=61  Identities=18%  Similarity=0.305  Sum_probs=55.2

Q ss_pred             ceeecccccccccccchhHHHHHHH-cCCCCc--------eeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRT-HFDTRP--------YKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      .|.|..  |++.|.....|.+|++. |.++++        |.|..  |++.|.....|..|+++|+++++|.|.
T Consensus        25 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            366854  99999999999999998 888877        89988  999999999999999999999999986

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=9.3e-13  Score=79.23  Aligned_cols=56  Identities=29%  Similarity=0.488  Sum_probs=32.6

Q ss_pred             CCCceeecccccccccccchhHHHHHHHcCCCCceeec-cCccCccCCChHHHHHHhhhcCCC
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM-YKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      ++++|.|..  |++.|. ...|..|+++ .+++||+|+ .  |++.|...+.|..|+++|...
T Consensus         7 ~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhccc
Confidence            445566643  666666 6666666655 556666665 4  666666666666666655443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.3e-13  Score=74.02  Aligned_cols=44  Identities=25%  Similarity=0.436  Sum_probs=32.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            566677777777766  77777777777777777777777777765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.31  E-value=6.3e-13  Score=73.97  Aligned_cols=45  Identities=20%  Similarity=0.366  Sum_probs=32.6

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3566677777777766  77777777777777777777777777665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7e-13  Score=73.79  Aligned_cols=44  Identities=25%  Similarity=0.409  Sum_probs=31.1

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566667777777766  77777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.3e-13  Score=73.98  Aligned_cols=44  Identities=18%  Similarity=0.369  Sum_probs=29.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            555666666666655  66666666666666666666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.7e-13  Score=73.65  Aligned_cols=45  Identities=27%  Similarity=0.408  Sum_probs=29.5

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3556666666666655  66666666666666666666666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.4e-13  Score=73.99  Aligned_cols=44  Identities=20%  Similarity=0.428  Sum_probs=29.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            556666666777765  77777777777777777766666766655

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.31  E-value=6.2e-13  Score=74.05  Aligned_cols=45  Identities=20%  Similarity=0.372  Sum_probs=32.9

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3566677777777766  77777777777777777777777777765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.8e-13  Score=73.43  Aligned_cols=44  Identities=20%  Similarity=0.362  Sum_probs=30.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            556667777777766  77777777777777777777777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.30  E-value=6.1e-13  Score=74.06  Aligned_cols=44  Identities=23%  Similarity=0.386  Sum_probs=31.1

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566667777777766  77777777777777777777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.3e-13  Score=73.97  Aligned_cols=44  Identities=20%  Similarity=0.375  Sum_probs=29.0

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|..  |++.|...+.|.+|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            555666666666655  66666666666666666666666666655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.30  E-value=6.3e-13  Score=74.03  Aligned_cols=44  Identities=18%  Similarity=0.444  Sum_probs=29.5

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555666666666655  67777776667777666666666666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.5e-13  Score=73.66  Aligned_cols=45  Identities=18%  Similarity=0.299  Sum_probs=33.0

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|.|+.  |++.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3566677777777766  77777777777777777777777777765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.5e-13  Score=73.70  Aligned_cols=44  Identities=23%  Similarity=0.407  Sum_probs=31.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556667777777766  77777777777777777777777777665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=7.4e-13  Score=73.75  Aligned_cols=45  Identities=18%  Similarity=0.309  Sum_probs=32.5

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3566677777777766  77777777777777777777777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.1e-13  Score=73.35  Aligned_cols=44  Identities=23%  Similarity=0.455  Sum_probs=29.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            555666666677765  77777777777777666666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=73.16  Aligned_cols=44  Identities=23%  Similarity=0.432  Sum_probs=30.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            556666777777766  77777777777777777777777777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=73.11  Aligned_cols=44  Identities=18%  Similarity=0.459  Sum_probs=31.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|.....|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            556677777777766  77777777777777777777777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.9e-13  Score=73.85  Aligned_cols=44  Identities=18%  Similarity=0.394  Sum_probs=28.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            555666666666655  66666666666666666666666666655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=73.11  Aligned_cols=44  Identities=20%  Similarity=0.438  Sum_probs=29.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            556666666677765  77777777777777766666666666655

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.1e-12  Score=72.96  Aligned_cols=45  Identities=24%  Similarity=0.480  Sum_probs=30.1

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3556666666677755  77777777777777666666666666655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.7e-13  Score=73.43  Aligned_cols=44  Identities=20%  Similarity=0.434  Sum_probs=30.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556666677777766  77777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=8.7e-13  Score=72.70  Aligned_cols=44  Identities=18%  Similarity=0.396  Sum_probs=26.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344555666666655  66666666666666666666666666554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=8.6e-13  Score=73.41  Aligned_cols=44  Identities=18%  Similarity=0.260  Sum_probs=31.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            556677777777766  77777777777777777777777777665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=72.81  Aligned_cols=44  Identities=20%  Similarity=0.403  Sum_probs=31.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            556677777777766  77777777777777777777777777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.8e-13  Score=73.59  Aligned_cols=44  Identities=30%  Similarity=0.459  Sum_probs=28.5

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            555666666666655  66666666666666666666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.2e-12  Score=72.82  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=31.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            556667777777766  77777777777777777777777777665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.7e-13  Score=73.44  Aligned_cols=44  Identities=20%  Similarity=0.392  Sum_probs=28.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            555566666666655  66666666666666666666666666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.5e-13  Score=73.23  Aligned_cols=44  Identities=23%  Similarity=0.354  Sum_probs=26.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455555666666655  66666666666666666666666666554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.3e-13  Score=73.75  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=28.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            555566666666655  66666666666666666666666666655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=1.4e-12  Score=72.60  Aligned_cols=44  Identities=23%  Similarity=0.412  Sum_probs=31.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            566677777777766  77777777777777777777777777665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.6e-12  Score=77.21  Aligned_cols=59  Identities=20%  Similarity=0.373  Sum_probs=52.1

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCc
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRP   67 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   67 (196)
                      ..++|.|.   .|++.|. ...|..|+++ .+++||.|. ..|++.|.....|..|+++|...++
T Consensus         7 ~~~~~~C~---~C~k~f~-~~~L~~H~~~-~~~~p~~C~-~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCT---YCTKEFV-FDTIQSHQYQ-CPRLPVACP-NQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECS---SSCCEEE-HHHHHHHHHH-CSSSEEECT-TCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeecc---ccCCccC-HHHHHHHHHH-cCCcCccCC-cccCcccccHHHHHHHHHhhcccCc
Confidence            45788888   6999999 9999999999 999999995 0499999999999999999876654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.6e-13  Score=73.42  Aligned_cols=45  Identities=22%  Similarity=0.469  Sum_probs=32.2

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +|+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3566677777777766  77777777777777777777777777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.2e-13  Score=74.05  Aligned_cols=44  Identities=32%  Similarity=0.507  Sum_probs=28.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            555566666666655  66666666666666666666666666654

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.7e-13  Score=73.91  Aligned_cols=44  Identities=23%  Similarity=0.358  Sum_probs=27.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555566666666655  66666666666666666666666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=72.74  Aligned_cols=44  Identities=23%  Similarity=0.382  Sum_probs=31.0

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            456667777777766  77777777777777777777777777665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.28  E-value=9.5e-13  Score=73.30  Aligned_cols=44  Identities=23%  Similarity=0.446  Sum_probs=24.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555544  55555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=72.66  Aligned_cols=44  Identities=25%  Similarity=0.434  Sum_probs=30.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            555666677777765  77777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.8e-12  Score=72.16  Aligned_cols=44  Identities=18%  Similarity=0.374  Sum_probs=28.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            455566666666655  66666666666666666666666666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.5e-13  Score=73.73  Aligned_cols=44  Identities=25%  Similarity=0.408  Sum_probs=27.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            555566666666655  66666666666666666666666666554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=72.72  Aligned_cols=44  Identities=27%  Similarity=0.486  Sum_probs=29.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556666667777765  77777777777777777776777766653

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.6e-13  Score=73.68  Aligned_cols=44  Identities=20%  Similarity=0.429  Sum_probs=26.5

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555666666655  66666666666666666666666666554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=73.03  Aligned_cols=44  Identities=20%  Similarity=0.430  Sum_probs=27.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            455566666666655  66666666666666666666666666655

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.27  E-value=1.6e-12  Score=72.40  Aligned_cols=44  Identities=20%  Similarity=0.413  Sum_probs=29.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|+|+.  |++.|.....|..|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455666666777765  77777777777777777776677766655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.3e-13  Score=73.75  Aligned_cols=44  Identities=25%  Similarity=0.448  Sum_probs=26.1

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445555566666655  66666666666666666666666666554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.9e-12  Score=72.02  Aligned_cols=44  Identities=14%  Similarity=0.144  Sum_probs=26.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445556666666655  66666666666666666666666666554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-12  Score=72.73  Aligned_cols=44  Identities=27%  Similarity=0.483  Sum_probs=27.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445566666666655  66666666666666666666666666655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=71.45  Aligned_cols=44  Identities=20%  Similarity=0.459  Sum_probs=32.0

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhh-hcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|..  |++.|...+.|..|++ +|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            566677777777766  7777777777777777 7777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.6e-12  Score=71.63  Aligned_cols=43  Identities=35%  Similarity=0.626  Sum_probs=37.6

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.++++|.|+.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567888999999965  9999999999999999999999999976

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=71.91  Aligned_cols=44  Identities=25%  Similarity=0.473  Sum_probs=26.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      |+++|.++++|.|+.  |++.|.....|.+|+++|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            445556666666655  66666666666666666666666666554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=1.2e-11  Score=71.25  Aligned_cols=46  Identities=22%  Similarity=0.405  Sum_probs=30.3

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhh-hcCCCCCCccccccccCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHDHLTPAKMRKLNYAK  109 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  109 (196)
                      |.++++|.|+.  |++.|.....|.+|++ +|.++++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            45566666655  6666666666666665 6666666666666666654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.23  E-value=1.8e-12  Score=72.10  Aligned_cols=43  Identities=33%  Similarity=0.547  Sum_probs=39.3

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999976

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-12  Score=72.06  Aligned_cols=44  Identities=34%  Similarity=0.497  Sum_probs=39.4

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=70.86  Aligned_cols=43  Identities=19%  Similarity=0.397  Sum_probs=26.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKM  102 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  102 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445566666666655  6666666666666666666666666654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-12  Score=72.27  Aligned_cols=44  Identities=32%  Similarity=0.485  Sum_probs=39.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999976

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=72.03  Aligned_cols=44  Identities=39%  Similarity=0.617  Sum_probs=39.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2e-12  Score=71.92  Aligned_cols=44  Identities=39%  Similarity=0.625  Sum_probs=39.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=72.00  Aligned_cols=44  Identities=36%  Similarity=0.529  Sum_probs=39.7

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=71.38  Aligned_cols=44  Identities=39%  Similarity=0.590  Sum_probs=40.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788899999999965  9999999999999999999999999976

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.8e-12  Score=72.13  Aligned_cols=44  Identities=36%  Similarity=0.596  Sum_probs=39.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999976

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=71.26  Aligned_cols=44  Identities=41%  Similarity=0.519  Sum_probs=40.3

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.++++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=72.00  Aligned_cols=44  Identities=32%  Similarity=0.569  Sum_probs=39.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999976

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=71.18  Aligned_cols=44  Identities=32%  Similarity=0.566  Sum_probs=40.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999965  9999999999999999999999999976

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.6e-12  Score=71.43  Aligned_cols=44  Identities=34%  Similarity=0.587  Sum_probs=39.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.21  E-value=2.1e-12  Score=71.79  Aligned_cols=44  Identities=36%  Similarity=0.557  Sum_probs=39.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=71.29  Aligned_cols=44  Identities=39%  Similarity=0.681  Sum_probs=40.2

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788899999999965  9999999999999999999999999976

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.21  E-value=2.1e-12  Score=71.88  Aligned_cols=44  Identities=39%  Similarity=0.630  Sum_probs=38.7

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.5e-12  Score=71.50  Aligned_cols=44  Identities=34%  Similarity=0.588  Sum_probs=39.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.3e-12  Score=71.68  Aligned_cols=44  Identities=41%  Similarity=0.581  Sum_probs=39.4

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=71.59  Aligned_cols=44  Identities=30%  Similarity=0.525  Sum_probs=39.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.5e-12  Score=71.47  Aligned_cols=44  Identities=34%  Similarity=0.486  Sum_probs=39.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.9e-12  Score=71.98  Aligned_cols=44  Identities=36%  Similarity=0.483  Sum_probs=39.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.3e-12  Score=71.63  Aligned_cols=43  Identities=33%  Similarity=0.515  Sum_probs=39.0

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999976

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=8.3e-13  Score=78.53  Aligned_cols=57  Identities=12%  Similarity=0.223  Sum_probs=38.1

Q ss_pred             HHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcccc
Q psy9954          55 RAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPS  116 (196)
Q Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  116 (196)
                      |..|+++|.+++||.|+.  |++.|.....|.   ++|.++++|.|..|++.|....++..+
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            345666677777777766  777777666665   567777777777777777666665544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.21  E-value=2e-12  Score=71.93  Aligned_cols=44  Identities=27%  Similarity=0.445  Sum_probs=39.3

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            3778899999999965  9999999999999999999999999976

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.4e-12  Score=71.57  Aligned_cols=44  Identities=36%  Similarity=0.565  Sum_probs=39.3

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999976

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=2.5e-12  Score=71.46  Aligned_cols=44  Identities=39%  Similarity=0.555  Sum_probs=39.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999976

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=71.55  Aligned_cols=44  Identities=32%  Similarity=0.563  Sum_probs=39.4

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.2e-12  Score=71.76  Aligned_cols=43  Identities=35%  Similarity=0.594  Sum_probs=38.4

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999976

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.2e-12  Score=71.07  Aligned_cols=43  Identities=33%  Similarity=0.570  Sum_probs=39.0

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999976

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.20  E-value=2.3e-12  Score=71.69  Aligned_cols=44  Identities=34%  Similarity=0.547  Sum_probs=39.4

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=71.55  Aligned_cols=43  Identities=40%  Similarity=0.586  Sum_probs=38.3

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            677899999999965  9999999999999999999999999976

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.3e-12  Score=71.70  Aligned_cols=44  Identities=23%  Similarity=0.357  Sum_probs=39.7

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2e-12  Score=71.95  Aligned_cols=44  Identities=43%  Similarity=0.665  Sum_probs=39.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.3e-12  Score=71.69  Aligned_cols=44  Identities=30%  Similarity=0.545  Sum_probs=40.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.1e-12  Score=71.84  Aligned_cols=44  Identities=32%  Similarity=0.558  Sum_probs=39.7

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.++++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.4e-12  Score=71.60  Aligned_cols=43  Identities=26%  Similarity=0.454  Sum_probs=38.3

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            677889999999965  9999999999999999999999999976

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.6e-12  Score=71.42  Aligned_cols=43  Identities=33%  Similarity=0.574  Sum_probs=39.3

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999976

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.6e-12  Score=71.41  Aligned_cols=44  Identities=27%  Similarity=0.347  Sum_probs=39.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.5e-12  Score=71.45  Aligned_cols=44  Identities=36%  Similarity=0.471  Sum_probs=39.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.1e-12  Score=71.83  Aligned_cols=44  Identities=36%  Similarity=0.627  Sum_probs=39.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999976

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.1e-12  Score=71.12  Aligned_cols=44  Identities=39%  Similarity=0.595  Sum_probs=39.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999976

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=3.6e-12  Score=70.88  Aligned_cols=43  Identities=19%  Similarity=0.233  Sum_probs=38.8

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            3 SGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999976

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.6e-12  Score=71.45  Aligned_cols=44  Identities=43%  Similarity=0.667  Sum_probs=38.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999976

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.2e-12  Score=71.05  Aligned_cols=44  Identities=36%  Similarity=0.601  Sum_probs=39.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999975

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=4.2e-12  Score=70.59  Aligned_cols=43  Identities=33%  Similarity=0.522  Sum_probs=38.6

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|..
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            677899999999965  9999999999999999999999999976

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.18  E-value=5.8e-12  Score=70.03  Aligned_cols=42  Identities=19%  Similarity=0.444  Sum_probs=24.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555556666655  666666666666666666656665554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.18  E-value=9.2e-12  Score=67.72  Aligned_cols=40  Identities=20%  Similarity=0.445  Sum_probs=23.2

Q ss_pred             HHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          59 QRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      +++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|
T Consensus         2 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            44555555566655  66666666666666655555555555

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.9e-12  Score=69.71  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=26.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|+|..  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666655  666666666666666666666666664

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.1e-12  Score=69.63  Aligned_cols=42  Identities=26%  Similarity=0.463  Sum_probs=27.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|+|+.  |++.|...+.|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            555666666666655  666666666666666666666666664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8e-12  Score=69.37  Aligned_cols=42  Identities=21%  Similarity=0.461  Sum_probs=27.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            555666666666655  666666666666666666666666664

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.7e-12  Score=71.44  Aligned_cols=43  Identities=42%  Similarity=0.668  Sum_probs=37.0

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            677888888999955  9999999999999998898888998876

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.9e-12  Score=69.39  Aligned_cols=42  Identities=19%  Similarity=0.461  Sum_probs=26.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666655  666666666666666666666666664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.1e-12  Score=69.59  Aligned_cols=42  Identities=26%  Similarity=0.473  Sum_probs=24.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            445555566666655  666666666666666666666666554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.17  E-value=5.4e-12  Score=68.68  Aligned_cols=42  Identities=33%  Similarity=0.561  Sum_probs=36.7

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567888999999965  999999999999999999999999884

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.7e-12  Score=69.48  Aligned_cols=42  Identities=21%  Similarity=0.504  Sum_probs=27.0

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555566666666655  666666666666666666666666664

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.1e-12  Score=69.63  Aligned_cols=42  Identities=24%  Similarity=0.556  Sum_probs=23.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|...+.|.+|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.7e-12  Score=69.46  Aligned_cols=42  Identities=21%  Similarity=0.468  Sum_probs=28.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666655  777777666677776666666666665

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.9e-12  Score=69.25  Aligned_cols=42  Identities=24%  Similarity=0.516  Sum_probs=28.0

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            555666666666655  666666666666666666666666664

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.4e-12  Score=69.28  Aligned_cols=42  Identities=19%  Similarity=0.485  Sum_probs=27.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666666666655  666666666666666666666666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.2e-11  Score=67.20  Aligned_cols=41  Identities=22%  Similarity=0.463  Sum_probs=24.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|...+.|.+|+++|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344555666666655  66666666666666666666666655

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.3e-12  Score=69.34  Aligned_cols=42  Identities=24%  Similarity=0.442  Sum_probs=29.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666677777766  777777777777777777777777665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=68.92  Aligned_cols=43  Identities=26%  Similarity=0.437  Sum_probs=30.0

Q ss_pred             HHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          59 QRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      +++|.++++|.|+.  |++.|.....|.+|+++|+++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34566677777766  77777777777777777777777777665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=68.80  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=28.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666677765  777777777777777666666666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.4e-12  Score=69.58  Aligned_cols=42  Identities=21%  Similarity=0.507  Sum_probs=23.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555554  555555555555555555555555553

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4e-12  Score=70.71  Aligned_cols=43  Identities=30%  Similarity=0.483  Sum_probs=37.8

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.++++|.|+.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            567888999999965  9999999999999999999999999976

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.16  E-value=3.1e-12  Score=73.75  Aligned_cols=50  Identities=16%  Similarity=0.267  Sum_probs=29.1

Q ss_pred             cccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCC
Q psy9954          47 KAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLT   98 (196)
Q Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (196)
                      +.|.....|..|++.|.++++|.|..  |++.|...+.|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCC
Confidence            34555555555666666666666655  666666666666666666555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=9.2e-12  Score=69.19  Aligned_cols=42  Identities=26%  Similarity=0.520  Sum_probs=21.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|+|..  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344455555555544  555555555555555555555555553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.2e-11  Score=68.64  Aligned_cols=42  Identities=21%  Similarity=0.416  Sum_probs=24.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            445555556666655  666666666666666666666665554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.3e-12  Score=69.88  Aligned_cols=43  Identities=33%  Similarity=0.556  Sum_probs=38.5

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999965

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.9e-12  Score=69.43  Aligned_cols=42  Identities=26%  Similarity=0.474  Sum_probs=28.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            555666677777765  777777777777777777777777664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=69.03  Aligned_cols=42  Identities=21%  Similarity=0.481  Sum_probs=28.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666666677765  777777777777776666666666664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.2e-11  Score=68.75  Aligned_cols=42  Identities=24%  Similarity=0.461  Sum_probs=29.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|.....|.+|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456667777777766  777777777777777777777777765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.16  E-value=9e-12  Score=71.77  Aligned_cols=52  Identities=17%  Similarity=0.266  Sum_probs=47.9

Q ss_pred             hhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCcee
Q psy9954          16 AKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYK   69 (196)
Q Consensus        16 ~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   69 (196)
                      ++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            578889999999999999999999965  9999999999999999999999873

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=68.11  Aligned_cols=41  Identities=20%  Similarity=0.455  Sum_probs=22.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.+++||+|+.  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            444555555555544  55555555555555555555555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=3.5e-11  Score=67.44  Aligned_cols=42  Identities=17%  Similarity=0.251  Sum_probs=29.9

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccc
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKL  105 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  105 (196)
                      |.++++|.|..  |++.|.....|..|+++|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45566777766  7777777777777777777777777777764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=67.88  Aligned_cols=41  Identities=22%  Similarity=0.481  Sum_probs=25.0

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            455566666666655  66666666666666666666666655

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.3e-11  Score=67.77  Aligned_cols=41  Identities=22%  Similarity=0.442  Sum_probs=26.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            555666666666655  66666666666666666666666665

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.7e-12  Score=69.76  Aligned_cols=44  Identities=36%  Similarity=0.573  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.8e-12  Score=69.07  Aligned_cols=42  Identities=26%  Similarity=0.516  Sum_probs=26.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|+|..  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            555566666666655  666666666666666666666666664

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.4e-12  Score=70.38  Aligned_cols=44  Identities=32%  Similarity=0.526  Sum_probs=38.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHH-HcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|++ +|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            3678899999999965  9999999999999999 899999999976

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.1e-11  Score=68.92  Aligned_cols=42  Identities=24%  Similarity=0.430  Sum_probs=24.3

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|.++++|.|.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555666655  666666666666666555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=2.5e-11  Score=67.02  Aligned_cols=42  Identities=17%  Similarity=0.386  Sum_probs=27.6

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcccccc
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRK  104 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  104 (196)
                      .|.++++|.|+.  |++.|...+.|..|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            355666666655  666666666666666666666666666664

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=2.6e-11  Score=69.79  Aligned_cols=46  Identities=28%  Similarity=0.534  Sum_probs=34.4

Q ss_pred             hCCCCceeecccccccccccchhHHHHHH-HcCCCCceeeccCccCccCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTRPYKCMYKGCTKRYTD   81 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~   81 (196)
                      |.++++|.|.+  |++.|.....|.+|++ +|.++++|+|+.  |++.|.+
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            56677788854  8888887888888876 777777888866  8877764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.9e-12  Score=67.96  Aligned_cols=42  Identities=29%  Similarity=0.556  Sum_probs=35.8

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999965  999999999999999999999998873

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.14  E-value=7.4e-12  Score=69.58  Aligned_cols=44  Identities=41%  Similarity=0.600  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.6e-11  Score=68.13  Aligned_cols=42  Identities=19%  Similarity=0.466  Sum_probs=25.5

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|+|..  |++.|...+.|.+|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445556666666655  666666666666666666666666654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=67.98  Aligned_cols=41  Identities=22%  Similarity=0.417  Sum_probs=27.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            555666666777765  77777777777777777766666666

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=68.66  Aligned_cols=42  Identities=21%  Similarity=0.482  Sum_probs=22.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455555555544  555555555555555555555555553

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.7e-11  Score=67.39  Aligned_cols=41  Identities=17%  Similarity=0.357  Sum_probs=28.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            556666677777765  77777777777777777777777666

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.6e-12  Score=69.09  Aligned_cols=44  Identities=39%  Similarity=0.660  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=68.14  Aligned_cols=42  Identities=24%  Similarity=0.432  Sum_probs=27.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666655  666666666666666666666666664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.8e-12  Score=67.58  Aligned_cols=41  Identities=22%  Similarity=0.449  Sum_probs=26.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            455666666666655  66666666666666666666666655

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.1e-12  Score=69.14  Aligned_cols=44  Identities=41%  Similarity=0.571  Sum_probs=38.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.2e-12  Score=69.41  Aligned_cols=44  Identities=39%  Similarity=0.544  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=68.92  Aligned_cols=44  Identities=39%  Similarity=0.532  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=68.98  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.2e-12  Score=69.37  Aligned_cols=44  Identities=32%  Similarity=0.569  Sum_probs=38.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3678889999999965  9999999999999999999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.5e-11  Score=67.63  Aligned_cols=43  Identities=26%  Similarity=0.495  Sum_probs=39.0

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999983

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2e-11  Score=67.79  Aligned_cols=42  Identities=19%  Similarity=0.395  Sum_probs=26.1

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCC-CCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH-DHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|++ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            455566666666655  66666666666666666666 6666664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=67.93  Aligned_cols=43  Identities=40%  Similarity=0.590  Sum_probs=38.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999884

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.7e-12  Score=68.55  Aligned_cols=43  Identities=35%  Similarity=0.512  Sum_probs=38.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3778899999999965  999999999999999999999999984

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.2e-12  Score=69.32  Aligned_cols=44  Identities=39%  Similarity=0.606  Sum_probs=38.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=68.90  Aligned_cols=43  Identities=37%  Similarity=0.517  Sum_probs=39.0

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=68.88  Aligned_cols=44  Identities=34%  Similarity=0.572  Sum_probs=39.0

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            3778899999999965  9999999999999999999999999863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.9e-11  Score=66.45  Aligned_cols=41  Identities=20%  Similarity=0.465  Sum_probs=29.8

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            455677777777766  77777777777777777777777766

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.7e-12  Score=69.26  Aligned_cols=44  Identities=32%  Similarity=0.539  Sum_probs=37.7

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677888899999955  9999999999999999999999998863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.5e-11  Score=67.40  Aligned_cols=42  Identities=21%  Similarity=0.514  Sum_probs=24.2

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555555666655  666666666666666666555555553

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-11  Score=68.98  Aligned_cols=42  Identities=29%  Similarity=0.551  Sum_probs=37.1

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            677888999999965  999999999999999999999999885

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=2.7e-11  Score=65.79  Aligned_cols=41  Identities=22%  Similarity=0.401  Sum_probs=23.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344555556666655  66666666666666666666655554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.9e-12  Score=69.02  Aligned_cols=44  Identities=41%  Similarity=0.639  Sum_probs=38.2

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999965  9999999999999999999999999863

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=67.66  Aligned_cols=45  Identities=18%  Similarity=0.490  Sum_probs=29.3

Q ss_pred             HHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          59 QRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      .++|.++++|.|.++.|++.|.....|.+|+++|.++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345666677777511277777777777777777777777777665

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-11  Score=68.72  Aligned_cols=44  Identities=30%  Similarity=0.494  Sum_probs=37.6

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3677888899999965  9999999999999999999999998863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-11  Score=68.71  Aligned_cols=42  Identities=19%  Similarity=0.426  Sum_probs=27.9

Q ss_pred             HHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccc
Q psy9954          60 RTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMR  103 (196)
Q Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  103 (196)
                      ++|.++++|.|+.  |++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4466666666655  66667666667667666666666666655

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.9e-12  Score=69.05  Aligned_cols=44  Identities=36%  Similarity=0.523  Sum_probs=38.0

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3677889999999965  9999999999999999999999999863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.2e-11  Score=68.71  Aligned_cols=44  Identities=36%  Similarity=0.616  Sum_probs=38.7

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.2e-11  Score=68.72  Aligned_cols=44  Identities=36%  Similarity=0.552  Sum_probs=37.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4678888999999965  9999999999999999999999998863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.1e-11  Score=68.80  Aligned_cols=43  Identities=37%  Similarity=0.560  Sum_probs=38.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999985

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-11  Score=68.59  Aligned_cols=43  Identities=33%  Similarity=0.590  Sum_probs=38.2

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999986

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.1e-11  Score=68.91  Aligned_cols=44  Identities=36%  Similarity=0.557  Sum_probs=38.1

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778889999999965  9999999999999999999999999863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=9e-12  Score=69.20  Aligned_cols=44  Identities=34%  Similarity=0.587  Sum_probs=37.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            3677888899999965  9999999999999999999999998863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=9.9e-12  Score=69.09  Aligned_cols=43  Identities=40%  Similarity=0.607  Sum_probs=37.2

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            577888999999965  9999999999999999999999998863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.10  E-value=1.8e-11  Score=66.49  Aligned_cols=41  Identities=34%  Similarity=0.575  Sum_probs=35.9

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            567788899999965  99999999999999999999999887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.1e-11  Score=68.83  Aligned_cols=42  Identities=24%  Similarity=0.448  Sum_probs=23.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      |+++|.++++|+|+.  |++.|...+.|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555554  555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-11  Score=68.14  Aligned_cols=43  Identities=35%  Similarity=0.448  Sum_probs=37.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3678889999999965  999999999999999999999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=66.46  Aligned_cols=41  Identities=24%  Similarity=0.469  Sum_probs=23.7

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.+++||.|+.  |++.|...+.|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344555556666655  66666666666666666655555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.6e-11  Score=68.16  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=38.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCC-CCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFD-TRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999965  99999999999999999999 9999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.9e-11  Score=67.86  Aligned_cols=42  Identities=40%  Similarity=0.711  Sum_probs=37.4

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567889999999965  999999999999999999999999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-11  Score=67.38  Aligned_cols=41  Identities=37%  Similarity=0.624  Sum_probs=36.7

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            677899999999965  99999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.6e-11  Score=67.45  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=38.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|..  |++.|.....|..|+++|.+++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4778899999999965  999999999999999999999999884

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.07  E-value=2.3e-12  Score=76.55  Aligned_cols=55  Identities=16%  Similarity=0.465  Sum_probs=47.0

Q ss_pred             HHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHH
Q psy9954          25 LKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLR   86 (196)
Q Consensus        25 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   86 (196)
                      |..|+++|.+++||.|+.  |++.|.....|.   ++|.+++||.|+.  |++.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCC--CCCccccCcccc
Confidence            456888999999999965  999999888776   7899999999988  999998776554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-11  Score=67.88  Aligned_cols=43  Identities=40%  Similarity=0.597  Sum_probs=38.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|.+|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3778899999999965  999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-11  Score=67.22  Aligned_cols=41  Identities=27%  Similarity=0.495  Sum_probs=36.0

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|.+++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            567888999999955  99999999999999999999999887

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=68.27  Aligned_cols=41  Identities=20%  Similarity=0.427  Sum_probs=19.9

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444555544  55555555555555544444444444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2e-11  Score=67.09  Aligned_cols=41  Identities=27%  Similarity=0.443  Sum_probs=20.9

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344455555555533  55555555555555555555555544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.2e-11  Score=65.78  Aligned_cols=41  Identities=17%  Similarity=0.241  Sum_probs=23.5

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            344455555566654  66666666666666655555555555

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.1e-11  Score=66.96  Aligned_cols=43  Identities=23%  Similarity=0.404  Sum_probs=39.5

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      +|+++|.++++|.|+.  |++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999988  999999999999999999999999883

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.3e-11  Score=67.46  Aligned_cols=42  Identities=40%  Similarity=0.678  Sum_probs=35.4

Q ss_pred             HHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        29 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|+.
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45688888899955  9999999999999988888888888876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-11  Score=68.35  Aligned_cols=43  Identities=37%  Similarity=0.505  Sum_probs=38.9

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.4e-11  Score=66.97  Aligned_cols=41  Identities=29%  Similarity=0.563  Sum_probs=35.3

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|.+++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            567788889999955  99999999999999999998888876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.4e-11  Score=65.06  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=25.4

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |+++|.++++|.|..  |++.|...+.|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            455566666666655  66666666666666666666666554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-11  Score=68.37  Aligned_cols=43  Identities=33%  Similarity=0.507  Sum_probs=37.3

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678889999999955  999999999999999999999999886

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.9e-11  Score=66.43  Aligned_cols=42  Identities=24%  Similarity=0.241  Sum_probs=35.2

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      |+++|.++++|.|.+  |++.|.....|..|+++|.+++||+|+
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567788888899955  999998888899998888888888873

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.1e-10  Score=65.32  Aligned_cols=42  Identities=19%  Similarity=0.416  Sum_probs=31.5

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCc
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTK   77 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   77 (196)
                      |.++++|.|.+  |++.|.....|.+|+++|.+++||.|++  |++
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            7 GRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            55677788854  8888888888888877777777888866  764

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1e-10  Score=64.48  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=30.2

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCT   76 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   76 (196)
                      .|.++++|.|..  |++.|.....|.+|+++|.++++|.|+.  |+
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            466777777744  7777777777777777777777777766  64

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.7e-11  Score=65.02  Aligned_cols=40  Identities=20%  Similarity=0.531  Sum_probs=25.7

Q ss_pred             HHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          60 RTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      ++|.++++|+|..  |++.|.....|..|+++|+++++|.|+
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3456666666655  666666666666666666666666664

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=7.5e-11  Score=65.42  Aligned_cols=40  Identities=18%  Similarity=0.351  Sum_probs=24.5

Q ss_pred             HHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          60 RTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      ++|.++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3455566666655  666666666666666666666666664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=2.2e-11  Score=77.49  Aligned_cols=60  Identities=15%  Similarity=0.390  Sum_probs=50.2

Q ss_pred             HHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCC
Q psy9954          59 QRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSV  124 (196)
Q Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  124 (196)
                      .++|.++++|.|+.  |++.|.....|..|+++|+++++|.|..|    .....|..|.+.+.+..
T Consensus        17 ~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           17 NGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCSS
T ss_pred             ccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhccccccc
Confidence            34688999999988  99999999999999999999999999765    46777888888777643

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.6e-11  Score=67.34  Aligned_cols=42  Identities=36%  Similarity=0.555  Sum_probs=32.0

Q ss_pred             HHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        29 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      +++|.++++|.|.+  |++.|.....|..|+++|.+++||.|+.
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35677778888854  8888888888888888887788888765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.1e-11  Score=65.45  Aligned_cols=42  Identities=36%  Similarity=0.491  Sum_probs=37.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|.+++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3678899999999965  99999999999999999999999886

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=1.8e-10  Score=62.91  Aligned_cols=39  Identities=21%  Similarity=0.479  Sum_probs=23.6

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccc
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAK  101 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  101 (196)
                      .|.++++|.|..  |++.|...+.|..|+++|+++++|.|.
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            355556666655  666666666666666666666666654

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.3e-11  Score=66.24  Aligned_cols=45  Identities=36%  Similarity=0.691  Sum_probs=37.4

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeecc
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY   72 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   72 (196)
                      |.++|.++++|.|.++.|++.|.....|.+|+++|.+++||+|..
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            346788899999962259999999999999999999999999976

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.6e-10  Score=61.46  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=25.1

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      +|.++++|+|+.  |++.|.....|..|+++|+++++|.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            456666666655  66666666666666666666666665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.1e-10  Score=64.78  Aligned_cols=41  Identities=32%  Similarity=0.474  Sum_probs=32.2

Q ss_pred             HHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        29 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      +++|.++++|.|.+  |++.|.....|..|+++|.+++||+|.
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45677788888854  888888888888888888888888875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.1e-11  Score=64.94  Aligned_cols=41  Identities=32%  Similarity=0.596  Sum_probs=34.5

Q ss_pred             HHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          29 QRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        29 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      .++|.++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            45688888999965  999999999999998889888888885

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=1.9e-10  Score=62.78  Aligned_cols=39  Identities=15%  Similarity=0.358  Sum_probs=28.2

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCCCceeec
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM   71 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   71 (196)
                      +|.++++|.|..  |++.|.....|.+|+++|.+++||.|+
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            466777777744  777777777777777777777777774

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.3e-10  Score=61.73  Aligned_cols=39  Identities=28%  Similarity=0.588  Sum_probs=32.3

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      ++|.++++|.|.+  |++.|.....|..|+++|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3578888888855  88888888888888888888888876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.2e-11  Score=76.28  Aligned_cols=63  Identities=17%  Similarity=0.266  Sum_probs=29.6

Q ss_pred             HHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          25 LKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        25 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |..|+++|.+.+++.|..  |++.|. ...|..|+ .|.+++||.|+.  |++.|. ...|..|+++|.+
T Consensus         5 L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTT
T ss_pred             HHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccC
Confidence            334444445555555533  555442 44455554 444455555544  555444 2444555544443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.5e-11  Score=74.23  Aligned_cols=68  Identities=16%  Similarity=0.114  Sum_probs=60.2

Q ss_pred             chhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccCCCC
Q psy9954          52 SSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSV  124 (196)
Q Consensus        52 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  124 (196)
                      +..|..|+++|.+++++.|++  |++.|. .+.|..|+ .|.+++++.|..|++.|. ...|..|++++....
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             chHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            346788998999999999988  999995 99999999 899999999999999877 589999999877653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.5e-09  Score=64.80  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=29.6

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHh-hhcCCCCCCcccc
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHA-KNHNHDHLTPAKM  102 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  102 (196)
                      +.+++||+|.+++|++.|...+.|.+|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4567777776555778888888888886 5777777777753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1.7e-09  Score=64.54  Aligned_cols=40  Identities=28%  Similarity=0.462  Sum_probs=25.4

Q ss_pred             hCCCCceeecccccccccccchhHHHHH-HHcCCCCceeec
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQ-RTHFDTRPYKCM   71 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~   71 (196)
                      +.+++||+|.++.|++.|....+|.+|+ ++|++++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            4566666665445666666666666665 456666666664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.80  E-value=4.2e-09  Score=55.93  Aligned_cols=37  Identities=22%  Similarity=0.593  Sum_probs=24.0

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcc
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPA  100 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  100 (196)
                      |.++++|.|..  |++.|...+.|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            34566677765  77777777777777777766666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=5.2e-11  Score=75.74  Aligned_cols=59  Identities=12%  Similarity=0.219  Sum_probs=47.9

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |.++|.++++|.|.+  |++.|.....|..|+++|.+++||+|..  |.    ....|..|.++|.+
T Consensus        16 ~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKR--QE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCC--CS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccch--hh----hHHHHHhhhccccc
Confidence            345689999999965  9999999999999999999999999965  54    55666677777665

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.76  E-value=2.9e-09  Score=55.79  Aligned_cols=35  Identities=23%  Similarity=0.542  Sum_probs=22.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |+++|.+++||+|+.  |++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhcc
Confidence            455666666666655  66666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.7e-09  Score=55.37  Aligned_cols=34  Identities=21%  Similarity=0.539  Sum_probs=19.5

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      +|.++++|.|..  |++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            355555666655  6666666666666665555543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.72  E-value=4.6e-09  Score=55.79  Aligned_cols=35  Identities=23%  Similarity=0.539  Sum_probs=17.6

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCCCcee
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYK   69 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   69 (196)
                      .++++|.|.+  |++.|.....|..|+++|.++++|.
T Consensus         2 ~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCceECCC--CCcccCCHHHHHHHHHHcCCCccce
Confidence            3445555533  5555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4e-09  Score=55.25  Aligned_cols=36  Identities=31%  Similarity=0.512  Sum_probs=28.6

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHHcCCCCc
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRP   67 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   67 (196)
                      ++|.++++|.|..  |++.|.....|..|+++|.+++|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            4677888888855  88888888888888888887764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.2e-08  Score=54.07  Aligned_cols=32  Identities=28%  Similarity=0.373  Sum_probs=16.4

Q ss_pred             CCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          63 FDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        63 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      .+++||+|+++.|++.|...+.|.+|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44555555322355555555555555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=5.6e-09  Score=55.04  Aligned_cols=22  Identities=27%  Similarity=0.585  Sum_probs=9.1

Q ss_pred             cCccCCChHHHHHHhhhcCCCC
Q psy9954          75 CTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        75 C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      |++.|...+.|.+|+++|++++
T Consensus        14 C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A           14 CGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             TCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCcccCCHHHHHHHHHHhCCCC
Confidence            4444444444444444444333

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.1e-08  Score=54.13  Aligned_cols=34  Identities=15%  Similarity=0.301  Sum_probs=20.4

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      +.+++||+|.++.|++.|..+..|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4556666664334666666666666666666554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.68  E-value=1.4e-08  Score=52.24  Aligned_cols=33  Identities=21%  Similarity=0.487  Sum_probs=20.4

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      |.++++|.|..  |++.|...+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            45566666655  6666666666666666665554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=4.6e-09  Score=54.98  Aligned_cols=36  Identities=33%  Similarity=0.699  Sum_probs=31.0

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      |+++|.+++||.|+.  |++.|.....|..|+++|.++
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            677889999999955  999999999999999988764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.66  E-value=1.7e-08  Score=52.03  Aligned_cols=33  Identities=24%  Similarity=0.527  Sum_probs=20.2

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      |.++++|.|..  |++.|...+.|.+|+++|++++
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCC
Confidence            45566666655  6666666666666666665544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.65  E-value=3.4e-08  Score=58.66  Aligned_cols=53  Identities=23%  Similarity=0.520  Sum_probs=24.4

Q ss_pred             eecccccccccccchhHHHHH-HHcCCCC------ceeeccCccCccCCChHHHHHHhhh
Q psy9954          39 SCTYEGCHKAFSNSSDRAKHQ-RTHFDTR------PYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        39 ~C~~~~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      .|.+..|++.|.+...|..|+ +.|.+.+      +|.|.+.+|++.+.....|..|+++
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            344444444444444444444 2343332      4555544455555555555555443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.63  E-value=2.4e-08  Score=50.93  Aligned_cols=32  Identities=28%  Similarity=0.504  Sum_probs=23.5

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCCcee
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYS   39 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~   39 (196)
                      +||.|.   +||+.|...+.|..|+++|.++++|.
T Consensus         1 kp~~C~---~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACP---ECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCS---SSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCC---CCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            356666   58888888888888888887777764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=2.4e-08  Score=51.36  Aligned_cols=33  Identities=27%  Similarity=0.492  Sum_probs=21.6

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR   66 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   66 (196)
                      |.++++|.|..  |++.|.....|..|++.|.+++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            55666677744  7777777777777766666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.60  E-value=2.5e-08  Score=51.38  Aligned_cols=34  Identities=35%  Similarity=0.782  Sum_probs=22.9

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCCCc
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRP   67 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   67 (196)
                      |.++++|.|..  |++.|.....|.+|+++|.+++|
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            56667777744  77777777777777777766543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.59  E-value=9.6e-08  Score=56.66  Aligned_cols=55  Identities=22%  Similarity=0.521  Sum_probs=48.7

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHH-hhCCCC------ceeecccccccccccchhHHHHHHHc
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQR-SHTGER------PYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~-~h~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      |.|. +..|++.|.+...|..|+. .|.+.+      +|.|.+.+|++.+.....|..|+++.
T Consensus         2 l~C~-W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCK-WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCC-CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEe-eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            6677 7889999999999999984 688765      79999999999999999999999864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=2.6e-08  Score=52.39  Aligned_cols=37  Identities=30%  Similarity=0.624  Sum_probs=32.9

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCCCce
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPY   68 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   68 (196)
                      |.++++|.|.++.|++.|.....|.+|+++|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5789999996336999999999999999999999886

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.58  E-value=5.4e-09  Score=58.07  Aligned_cols=35  Identities=26%  Similarity=0.750  Sum_probs=17.3

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      .|.+++||.|.++.|++.|...+.|..|+++|+++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            35555555553112555555555555555555443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.58  E-value=5.9e-09  Score=57.91  Aligned_cols=40  Identities=23%  Similarity=0.556  Sum_probs=32.8

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCC
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR   66 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   66 (196)
                      .|+..|.++++|.|.++.|++.|.....|..|+++|.+++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4456689999999963359999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.57  E-value=3.9e-08  Score=50.13  Aligned_cols=30  Identities=27%  Similarity=0.455  Sum_probs=18.7

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCCCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLT   98 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (196)
                      ||.|+.  |++.|...+.|..|+++|+++++|
T Consensus         2 p~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPE--CPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            566655  666666666666666666666555

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=4.8e-08  Score=50.62  Aligned_cols=32  Identities=25%  Similarity=0.579  Sum_probs=20.1

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.++++|+|..  |++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            55566666655  666666666666666666544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=5.1e-08  Score=50.45  Aligned_cols=32  Identities=25%  Similarity=0.513  Sum_probs=19.6

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.++++|+|..  |++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            45566666655  666666666666666666544

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=6.9e-08  Score=50.00  Aligned_cols=32  Identities=16%  Similarity=0.408  Sum_probs=21.6

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.++++|+|..  |++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            55666777766  777777777777777766554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=3e-08  Score=51.93  Aligned_cols=32  Identities=19%  Similarity=0.427  Sum_probs=18.2

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHH-hhhcCC
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKH-AKNHNH   94 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~   94 (196)
                      +|.+++||+|+.  |++.|...+.|..| +++|++
T Consensus         3 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            355555666655  66666666666666 555543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.50  E-value=8.2e-08  Score=47.92  Aligned_cols=31  Identities=42%  Similarity=0.948  Sum_probs=22.1

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      +||.|. ++.||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~-~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCT-WSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCC-STTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCc-CCCCCcccCCHhHHHHHHHHhcCCC
Confidence            367775 3458888888888888888877653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.7e-08  Score=51.42  Aligned_cols=31  Identities=29%  Similarity=0.521  Sum_probs=16.5

Q ss_pred             cCCCCceeeccCccCccCCCh-HHHHHHhhhcCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDP-SSLRKHAKNHNH   94 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~h~~   94 (196)
                      |.++++|+|+.  |++.|... +.|..|+++|++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCCCEECSS--SSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCeECCC--CChhhccCHHHHHHHHHhcCC
Confidence            44555555544  55555555 555555555543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.49  E-value=5.8e-08  Score=50.78  Aligned_cols=19  Identities=42%  Similarity=0.695  Sum_probs=8.3

Q ss_pred             cCccCCChHHHHHHhhhcC
Q psy9954          75 CTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        75 C~~~f~~~~~l~~H~~~h~   93 (196)
                      |++.|...+.|..|+++|+
T Consensus        16 C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A           16 CGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             CCCEESCHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHhcC
Confidence            4444444444444444443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.3e-08  Score=49.41  Aligned_cols=32  Identities=22%  Similarity=0.449  Sum_probs=20.2

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.++++|.|..  |++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            45566666655  666666666666666666554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.47  E-value=8e-08  Score=50.21  Aligned_cols=36  Identities=25%  Similarity=0.468  Sum_probs=30.8

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR   66 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   66 (196)
                      .|.++++|.|.++.|++.|.....|.+|+++|.+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899999964369999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=8.5e-08  Score=49.64  Aligned_cols=33  Identities=24%  Similarity=0.514  Sum_probs=24.4

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      .|.++++|.|..  |++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            466777788854  888888778888887777665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=6.7e-08  Score=50.38  Aligned_cols=34  Identities=29%  Similarity=0.513  Sum_probs=26.8

Q ss_pred             HhhCCCCceeecccccccccccc-hhHHHHHHHcCCC
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNS-SDRAKHQRTHFDT   65 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~h~~~   65 (196)
                      ++|.++++|.|..  |++.|... ..|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            3577888888854  88888888 8888888888765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.3e-07  Score=48.97  Aligned_cols=32  Identities=25%  Similarity=0.556  Sum_probs=19.1

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.++++|.|+.  |++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            44555666655  666666666666666665543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.1e-07  Score=49.12  Aligned_cols=33  Identities=27%  Similarity=0.499  Sum_probs=23.7

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      +|.++++|.|.+  |++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            366777777754  777777777777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=5.7e-08  Score=50.80  Aligned_cols=34  Identities=21%  Similarity=0.374  Sum_probs=27.3

Q ss_pred             HhhCCCCceeecccccccccccchhHHHH-HHHcCCC
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKH-QRTHFDT   65 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~   65 (196)
                      ++|.+++||.|..  |++.|.....|..| ++.|.++
T Consensus         2 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            4678888888854  88888888888888 7777754

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.44  E-value=1.3e-07  Score=52.58  Aligned_cols=32  Identities=31%  Similarity=0.628  Sum_probs=20.1

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhh-hcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~   95 (196)
                      |.++++|.|..  |++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCC
Confidence            55666666655  6666666666666666 66554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.44  E-value=9.5e-08  Score=49.82  Aligned_cols=25  Identities=24%  Similarity=0.692  Sum_probs=17.1

Q ss_pred             CCCCceeeccCccCccCCChHHHHHHh
Q psy9954          63 FDTRPYKCMYKGCTKRYTDPSSLRKHA   89 (196)
Q Consensus        63 ~~~~~~~C~~~~C~~~f~~~~~l~~H~   89 (196)
                      .+++||+|..  |++.|...+.|.+|+
T Consensus         4 ~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCccCeECCC--CCCccCCHhHccCcC
Confidence            4566777755  777777777777776

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=7.9e-08  Score=49.77  Aligned_cols=33  Identities=33%  Similarity=0.602  Sum_probs=23.5

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      .|.++++|.|.+  |++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            466677777754  777777777777777777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.1e-07  Score=48.04  Aligned_cols=32  Identities=19%  Similarity=0.375  Sum_probs=18.7

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      |.++++|.|.+  |++.|.....|..|+++|.++
T Consensus         4 h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            45555666643  666666666666666665544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.9e-07  Score=47.52  Aligned_cols=32  Identities=25%  Similarity=0.600  Sum_probs=21.1

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      |.++++|.|..  |++.|.....|..|+++|.++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            45666677744  777777777777777666654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.36  E-value=1.8e-07  Score=52.00  Aligned_cols=34  Identities=24%  Similarity=0.633  Sum_probs=21.8

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHH-HcCCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQR-THFDTR   66 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~   66 (196)
                      +|+++++|.|.+  |++.|.....|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            356677777754  7777777777777777 666653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=4.5e-07  Score=45.38  Aligned_cols=30  Identities=37%  Similarity=0.804  Sum_probs=16.6

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +||.|.++.|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456665112666666666666666665543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=5.4e-07  Score=44.12  Aligned_cols=28  Identities=39%  Similarity=1.063  Sum_probs=18.7

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +||.|..  |++.|.....|..|+++|+++
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHHhccC
Confidence            5667765  777777777777777666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.29  E-value=5.2e-07  Score=44.85  Aligned_cols=30  Identities=33%  Similarity=0.873  Sum_probs=19.1

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +||.|+++.|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356675112777777777777777776654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=1.1e-06  Score=52.37  Aligned_cols=40  Identities=23%  Similarity=0.349  Sum_probs=30.4

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCCCCCcccccc
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRK  104 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  104 (196)
                      +.+++||+|..  |++.|...+.|.+|+++|++.. ..+.+++
T Consensus         8 ~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            56788899977  9999999999999999888764 3344443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.26  E-value=2.5e-08  Score=50.49  Aligned_cols=30  Identities=27%  Similarity=0.454  Sum_probs=16.4

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCCce
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGERPY   38 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~   38 (196)
                      ||.|.   .|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~---~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACP---ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSS---SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCC---CCCcccCCHHHHHHHHHHHccCCCC
Confidence            44444   3555555555555555555555554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.25  E-value=5.5e-07  Score=43.84  Aligned_cols=28  Identities=25%  Similarity=0.518  Sum_probs=17.0

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +||.|+.  |++.|...+.|..|+++|.++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            3566655  666666666666666666543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.24  E-value=3e-07  Score=47.88  Aligned_cols=24  Identities=33%  Similarity=0.513  Sum_probs=11.9

Q ss_pred             CCCceeecccccccccccchhHHHHH
Q psy9954          34 GERPYSCTYEGCHKAFSNSSDRAKHQ   59 (196)
Q Consensus        34 ~~~~~~C~~~~C~~~f~~~~~l~~H~   59 (196)
                      +++||.|..  |++.|...++|.+|+
T Consensus         5 gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CccCeECCC--CCCccCCHhHccCcC
Confidence            445555522  555555555555554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.24  E-value=9.8e-07  Score=42.84  Aligned_cols=27  Identities=56%  Similarity=0.995  Sum_probs=19.5

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      +|.|.   .|++.|.....|..|+++|.++
T Consensus         2 ~~~C~---~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCE---VCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCT---TTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECC---CCCcccCCHHHHHHHHHHhcCC
Confidence            56665   5777777777777777777665

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.23  E-value=3.9e-08  Score=49.70  Aligned_cols=20  Identities=35%  Similarity=0.592  Sum_probs=7.7

Q ss_pred             cCccCCChHHHHHHhhhcCC
Q psy9954          75 CTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        75 C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |++.|...+.|..|+++|++
T Consensus         8 C~k~f~~~~~L~~H~~~H~~   27 (32)
T 2kfq_A            8 CPKRFMRSDALSKHIKTAFI   27 (32)
T ss_dssp             SCTTHHHHHTTSSSTTSSSS
T ss_pred             CCcccCCHHHHHHHHHHHcc
Confidence            33333333333333333333

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=7.1e-07  Score=42.90  Aligned_cols=25  Identities=28%  Similarity=0.745  Sum_probs=17.5

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhc
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      +||+|+.  |++.|...+.|..|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            5677766  777777777777777665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=8.6e-07  Score=42.48  Aligned_cols=25  Identities=36%  Similarity=0.870  Sum_probs=17.0

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhc
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      +||.|..  |++.|...+.|..|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHc
Confidence            5667755  777777777777776665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.22  E-value=8.1e-07  Score=43.15  Aligned_cols=27  Identities=22%  Similarity=0.749  Sum_probs=17.1

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      ||.|+.  |++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            566655  666666666666666666544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=9.2e-07  Score=42.68  Aligned_cols=26  Identities=35%  Similarity=0.815  Sum_probs=18.4

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      ++|.|..  |++.|...+.|..|+++|+
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            5677766  7777777777777777664

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.21  E-value=5.8e-07  Score=43.74  Aligned_cols=27  Identities=33%  Similarity=0.732  Sum_probs=16.6

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      ||.|.   .|++.|.....|..|+++|.++
T Consensus         2 ~~~C~---~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACP---ECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECS---SSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCC---CCCchhCCHHHHHHHHHHhcCC
Confidence            45555   4666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=1.3e-06  Score=42.60  Aligned_cols=28  Identities=21%  Similarity=0.483  Sum_probs=16.7

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      ++|.|.   .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~---~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCD---YCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECT---TTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCC---CCCcccCCHHHHHHHHHHhccC
Confidence            355555   4666666666666666666554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=42.65  Aligned_cols=27  Identities=44%  Similarity=0.801  Sum_probs=19.0

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      +|.|.   .|++.|.....|..|+++|.++
T Consensus         2 ~~~C~---~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCR---ECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECT---TTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCC---CCCCccCChhHHHHHHHHhcCC
Confidence            56666   4777777777777777777665

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.16  E-value=1.1e-06  Score=42.90  Aligned_cols=27  Identities=37%  Similarity=0.805  Sum_probs=16.2

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +|.|..  |++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQY--CEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCC--CCCccCCHHHHHHHHHHHccC
Confidence            456655  666666666666666665544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.15  E-value=1.4e-06  Score=42.56  Aligned_cols=28  Identities=21%  Similarity=0.450  Sum_probs=18.4

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      +|.|.   .|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~---~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQ---YCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCS---SSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCC---CCCCccCCHHHHHHHHHHHccCC
Confidence            45555   47777777777777777766654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=1.5e-06  Score=43.36  Aligned_cols=21  Identities=43%  Similarity=0.721  Sum_probs=10.7

Q ss_pred             ChhccCCHHHHHHHHHhhCCC
Q psy9954          15 CAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus        15 C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      |++.|...+.|..|+++|+++
T Consensus        11 C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A           11 CDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCccCCHHHHHHHHHHccCC
Confidence            555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=9.3e-07  Score=42.88  Aligned_cols=27  Identities=33%  Similarity=0.797  Sum_probs=16.6

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +|.|..  |++.|.....|..|+++|.++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            566655  666666666666666665543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=1.7e-06  Score=41.24  Aligned_cols=26  Identities=31%  Similarity=0.837  Sum_probs=17.9

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      ||+|..  |++.|...+.|..|+++|++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            467766  77777777777777777654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=1.3e-06  Score=42.33  Aligned_cols=27  Identities=37%  Similarity=0.826  Sum_probs=17.6

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      ||.|.   .|++.|.....|..|+++|.++
T Consensus         2 ~~~C~---~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCP---HCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCS---SCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCC---CCCcccCCHHHHHHHHHHhccC
Confidence            45555   4777777777777777766654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=9.7e-07  Score=42.77  Aligned_cols=27  Identities=33%  Similarity=0.610  Sum_probs=14.9

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      ||.|+.  |++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            455544  555555555555555555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.39  E-value=3.7e-07  Score=44.55  Aligned_cols=26  Identities=38%  Similarity=0.814  Sum_probs=13.3

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      ||.|..  |++.|...+.|..|+++|++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVM--CGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            455544  55555555555555555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.2e-07  Score=44.38  Aligned_cols=27  Identities=44%  Similarity=0.775  Sum_probs=17.0

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      ||.|.   .|++.|.....|..|+++|.++
T Consensus         2 ~~~C~---~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCV---MCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            45555   4666666666666666666554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.4e-07  Score=44.55  Aligned_cols=27  Identities=33%  Similarity=1.020  Sum_probs=13.7

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      +||.|..  |++.|.....|..|+++|++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVRIHTG   28 (30)
Confidence            3455544  55555555555555555443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.08  E-value=1.9e-06  Score=41.09  Aligned_cols=26  Identities=31%  Similarity=0.687  Sum_probs=17.8

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTG   34 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~   34 (196)
                      ||.|.   .|++.|.....|..|+++|.+
T Consensus         1 ~~~C~---~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCG---LCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCS---SSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCC---CCCCcCCCHHHHHHHHHHcCC
Confidence            35555   577777777777777777765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.9e-06  Score=41.53  Aligned_cols=26  Identities=38%  Similarity=0.658  Sum_probs=15.7

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      ++|.|.   .|++.|.....|..|+++|+
T Consensus         2 k~~~C~---~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCS---VCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECS---SSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCC---CCCcccCCHHHHHHHHHhcC
Confidence            455555   46666666666666666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.05  E-value=3.4e-06  Score=50.14  Aligned_cols=31  Identities=23%  Similarity=0.412  Sum_probs=15.4

Q ss_pred             CCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          33 TGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        33 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      .+++||.|..  |++.|.....|.+|+++|+++
T Consensus         9 ~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGL--CGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCccCcCCCC--CCCccCCHHHHHhhhhhhCCC
Confidence            3445555532  555555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=2.8e-06  Score=41.53  Aligned_cols=27  Identities=30%  Similarity=0.652  Sum_probs=17.2

Q ss_pred             ceeeccCccCccCCChHHHHHH-hhhcCCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKH-AKNHNHD   95 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~   95 (196)
                      ||.|..  |++.|...+.|..| +++|.++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            566655  66666666666666 4566544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=5.8e-07  Score=44.08  Aligned_cols=28  Identities=39%  Similarity=0.786  Sum_probs=16.8

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      ++|.|.   .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~---~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCI---HCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            355555   4666666666666666666543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=3.8e-06  Score=40.08  Aligned_cols=25  Identities=28%  Similarity=0.553  Sum_probs=13.9

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhh
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h   32 (196)
                      +||.|.   .||+.|...+.|..|+++|
T Consensus         2 k~~~C~---~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCS---LCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECS---SSSCEESSHHHHHHHHHHC
T ss_pred             cCccCC---CcChhhCCHHHHHHHHHHc
Confidence            345554   3566666666666665554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=3e-06  Score=40.56  Aligned_cols=24  Identities=25%  Similarity=0.654  Sum_probs=12.6

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhh
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h   32 (196)
                      ||.|.   .||+.|...+.|..|+++|
T Consensus         3 ~~~C~---~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCP---LCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEET---TTTEEESCHHHHHHHHTTC
T ss_pred             CcCCC---CCCcccCCHHHHHHHHHhc
Confidence            44444   3555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.98  E-value=4.6e-06  Score=40.28  Aligned_cols=27  Identities=30%  Similarity=0.776  Sum_probs=16.2

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      +|.|.++.|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            566651126666666666666666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.8e-07  Score=41.85  Aligned_cols=24  Identities=42%  Similarity=0.941  Sum_probs=12.1

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhc
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      ||.|+.  |++.|...+.|..|+++|
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            445544  555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.94  E-value=3.4e-06  Score=41.19  Aligned_cols=27  Identities=37%  Similarity=0.799  Sum_probs=16.0

Q ss_pred             cccCCCCCcChhccCCHHHHHHH-HHhhCCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIH-QRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H-~~~h~~~   35 (196)
                      +|.|.   .|++.|...+.|..| +++|.++
T Consensus         2 ~~~C~---~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACG---LCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCT---TTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCc---ccCcccCChHHHHHHHHHHccCC
Confidence            45555   466666666666666 4556554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.91  E-value=5.2e-06  Score=40.10  Aligned_cols=19  Identities=32%  Similarity=0.732  Sum_probs=10.8

Q ss_pred             ChhccCCHHHHHHHHHhhC
Q psy9954          15 CAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        15 C~k~f~~~~~L~~H~~~h~   33 (196)
                      |++.|...+.|..|+++|.
T Consensus        10 C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A           10 CGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             TCEEESSHHHHHHHHGGGT
T ss_pred             CcCccCCHHHHHHHHHHhC
Confidence            5555555555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.13  E-value=1.6e-06  Score=41.09  Aligned_cols=24  Identities=33%  Similarity=0.761  Sum_probs=14.7

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhh
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h   32 (196)
                      ||.|.   .||+.|...+.|..|+++|
T Consensus         2 p~~C~---~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCE---RCGKRFVQSSQLANHIRHH   25 (26)
Confidence            45555   4666666666666666655

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.11  E-value=0.0015  Score=43.40  Aligned_cols=31  Identities=16%  Similarity=0.446  Sum_probs=26.4

Q ss_pred             HHcCCCCceeeccCccCccCCChHHHHHHhhhc
Q psy9954          60 RTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      ..|+|+++|.|..  |++.|.+.+.|..|+++.
T Consensus        43 ed~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            3477889999987  999999999999998753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.01  E-value=0.0012  Score=46.63  Aligned_cols=49  Identities=18%  Similarity=0.234  Sum_probs=20.3

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCCCCCCccccccccCCCCCCcccccc
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVR  118 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  118 (196)
                      ...|+..+|+.... ...|..|.+ .-.-++..|+.|+..+ .+..|..|+.
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~  130 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHIL  130 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHH
T ss_pred             ccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhh
Confidence            34454334544332 333444542 2223344455555444 3334444443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.58  E-value=0.0037  Score=41.51  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=24.6

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHH
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRT   61 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   61 (196)
                      ..|+|+++|.|..  |++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            4588888999965  99999999999888764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.29  E-value=0.021  Score=38.14  Aligned_cols=23  Identities=22%  Similarity=0.499  Sum_probs=11.7

Q ss_pred             CCceeeccCccCccCCChHHHHHHh
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHA   89 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~   89 (196)
                      ...|-|..  |++.|.+...|..|.
T Consensus        91 ~~~~~C~~--C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           91 DRSKCCPV--CNMTFSSPVVAESHY  113 (127)
T ss_dssp             CTTTEETT--TTEECSSHHHHHHHH
T ss_pred             CCCeEcCC--CCCEeCCHHHHHHHH
Confidence            33455544  555555555555554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.10  E-value=0.024  Score=37.87  Aligned_cols=51  Identities=24%  Similarity=0.410  Sum_probs=40.3

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHH--Hhh-------------------------------CCCCceeeccccccccccc
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQ--RSH-------------------------------TGERPYSCTYEGCHKAFSN   51 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~--~~h-------------------------------~~~~~~~C~~~~C~~~f~~   51 (196)
                      +++.|.   +|+..|.+.+.+..|.  +.|                               .+...|.|.+  |+..|.+
T Consensus        31 ~~~~C~---~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCK---VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPV--CNMTFSS  105 (127)
T ss_dssp             CSSEET---TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETT--TTEECSS
T ss_pred             CCCcCc---CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCC--CCCEeCC
Confidence            455666   8999999999999997  223                               1234688966  9999999


Q ss_pred             chhHHHHHH
Q psy9954          52 SSDRAKHQR   60 (196)
Q Consensus        52 ~~~l~~H~~   60 (196)
                      ...+..|+.
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999975

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.03  E-value=0.03  Score=30.13  Aligned_cols=23  Identities=26%  Similarity=0.433  Sum_probs=14.3

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHH
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQR   30 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~   30 (196)
                      ..|.|.+   |+..|.....|+.||+
T Consensus        11 ~~~~CPr---Cn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPR---CNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTT---TCCCCSSHHHHHHHHH
T ss_pred             CceeCCc---ccccccchHHHHhhhh
Confidence            4555553   6666666666666666

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.96  E-value=0.042  Score=38.48  Aligned_cols=105  Identities=14%  Similarity=0.153  Sum_probs=71.7

Q ss_pred             CCCcChhccCCHH-----HHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHH
Q psy9954          11 QFPHCAKAFSRLE-----NLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSL   85 (196)
Q Consensus        11 ~C~~C~k~f~~~~-----~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (196)
                      .||.|...+....     .+..-+.    .....|+..+|+..+. ...+..|.. .-.-.+..|+.  |+..+ .+..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~--C~~~~-~r~~l  125 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL----SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQ--CQRPF-QKFHI  125 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH----TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTT--TCCEE-EGGGH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh----hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCC--CChHH-HHHHH
Confidence            4778988876532     1222222    3457786557887665 556888874 33456789965  99887 67779


Q ss_pred             HHHhhhcCCCCCCccccccccCCCCCCccccccccCCCCC
Q psy9954          86 RKHAKNHNHDHLTPAKMRKLNYAKPGDIVPSVRNVNSSVP  125 (196)
Q Consensus        86 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  125 (196)
                      ..|+......+...|..|+..+.. ..|..|.....+..+
T Consensus       126 ~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          126 NIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             HHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             HHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            999988788888899999987754 577888877776543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.66  E-value=0.026  Score=30.39  Aligned_cols=23  Identities=22%  Similarity=0.404  Sum_probs=15.7

Q ss_pred             CceeeccCccCccCCChHHHHHHhh
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      .+|.|+.  |+..|.....|+.||+
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhh
Confidence            3566755  7777777777777776

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.51  E-value=0.41  Score=23.89  Aligned_cols=23  Identities=26%  Similarity=0.462  Sum_probs=17.6

Q ss_pred             ceeeccCccCccCCChHHHHHHhhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      .|.|++  |-+.|.+...|..|...
T Consensus         5 GFiCP~--C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            5 GFICPQ--CMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEECTT--TCCEESSHHHHHHHHHH
T ss_pred             ccCCcH--HHHHcCCHHHHHHHHHh
Confidence            478877  88888888888888654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.15  E-value=0.31  Score=29.97  Aligned_cols=23  Identities=30%  Similarity=0.579  Sum_probs=17.5

Q ss_pred             cChhccCCHHHHHHHHHhhCCCCcee
Q psy9954          14 HCAKAFSRLENLKIHQRSHTGERPYS   39 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~h~~~~~~~   39 (196)
                      +||+.|.   .|.+|+++|+|-.|..
T Consensus        26 ecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           26 ECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             BTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             ccchhhH---HHHHHHHHccCCCHHH
Confidence            6999998   4779999877766533

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=85.76  E-value=0.72  Score=23.00  Aligned_cols=24  Identities=29%  Similarity=0.736  Sum_probs=18.9

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHHh-hC
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQRS-HT   33 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~~-h~   33 (196)
                      |.|.   +|-+.|.+...|..|-.. |.
T Consensus         6 FiCP---~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICP---QCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECT---TTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCc---HHHHHcCCHHHHHHHHHhccc
Confidence            5555   799999999999999654 54

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.39  E-value=0.9  Score=22.08  Aligned_cols=22  Identities=36%  Similarity=0.913  Sum_probs=17.4

Q ss_pred             eeccCccCccCCChHHHHHHhhhc
Q psy9954          69 KCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      -|.+  |.+.+++-.+|..|++.-
T Consensus        11 hcrf--ckkkysdvknlikhire~   32 (37)
T 2elu_A           11 HCRF--CKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             EETT--TTEECSSHHHHHHHHHHT
T ss_pred             HHHH--HHHHHHHHHHHHHHHHHh
Confidence            5777  888888888888888753

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.00  E-value=0.12  Score=30.80  Aligned_cols=49  Identities=20%  Similarity=0.494  Sum_probs=28.1

Q ss_pred             CceeecccccccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHh
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHA   89 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   89 (196)
                      .+..|+ ..|+..+. ...|..|+...-..++..|.+  |+..+.. ..|..|.
T Consensus        15 ~~v~C~-~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~--C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCP-NRCPMKLS-RRDLPAHLQHDCPKRRLKCEF--CGCDFSG-EAYESHE   63 (76)
T ss_dssp             SCCBCT-TCCSCBCC-SSSSTTTTTTSCTTSCCCCSS--SCCCCCH-HHHHHTT
T ss_pred             cccCCC-ccccHHhh-HhHHHhhCHhhCCCcceECCC--CCCccCH-HHHHHHH
Confidence            445663 24766554 355666665444455667766  7776653 4456665

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=83.89  E-value=0.34  Score=29.18  Aligned_cols=21  Identities=19%  Similarity=0.320  Sum_probs=14.5

Q ss_pred             CCCCcChhccCCHHHHHHHHHh
Q psy9954          10 SQFPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~   31 (196)
                      .+||+||.... +..|...|..
T Consensus         9 ~~~PlCG~~L~-W~eLIeQML~   29 (95)
T 2k5c_A            9 AKCPICGSPLK-WEELIEEMLI   29 (95)
T ss_dssp             EECSSSCCEEC-HHHHHHHSTT
T ss_pred             ccCCcCCCccC-HHHHHHHHHh
Confidence            35889998874 5566666654

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=83.00  E-value=0.4  Score=26.49  Aligned_cols=20  Identities=15%  Similarity=0.238  Sum_probs=16.2

Q ss_pred             CCCcChhccCCHHHHHHHHH
Q psy9954          11 QFPHCAKAFSRLENLKIHQR   30 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~   30 (196)
                      +|.+|+..|.....|+.|+-
T Consensus        15 eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           15 ECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             CCTTTTCCCCSSSCHHHHHT
T ss_pred             cccccCcccccccchhhhhc
Confidence            46689999999888888863

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=80.81  E-value=0.41  Score=30.22  Aligned_cols=45  Identities=18%  Similarity=0.468  Sum_probs=31.1

Q ss_pred             eeecccccccccccchhHHHHHHHcCCCCceeec-cCccCccCCChHHHHHHhhh
Q psy9954          38 YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCM-YKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        38 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~   91 (196)
                      -.|+.  |...+.....   +    ..+..|.|. ..+|.++|.+..+|+.|+..
T Consensus        38 k~Cp~--C~~~V~rVe~---~----~~~~if~C~~~~~CkrtyLs~rdlqaHI~~   83 (101)
T 3vk6_A           38 KMCPG--CSDPVQRIEQ---C----TRGSLFMCSIVQGCKRTYLSQRDLQAHINH   83 (101)
T ss_dssp             CBCTT--TCCBCSEEEE---E----EGGGCCCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred             CCCcC--cCCeeeeeEE---e----ccCCEEECCCCCCHHHHhcCHHHHHHHHHH
Confidence            46744  8776654333   2    225578888 67789999999999988864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d2glia5	29	g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo	6e-10
d2glia4	31	g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo	8e-10
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	8e-10
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	9e-09
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-09
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	8e-06
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	9e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-07
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-07
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	6e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	8e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	4e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	1e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-05
d2j7ja2	29	g.37.1.1 (A:29-57) Transcription factor IIIA, TFII	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-04

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (120), Expect = 6e-10
 Identities = 19/27 (70%), Positives = 20/27 (74%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          +PY C   GCTKRYTDPSSLRKH K  
Sbjct: 1  KPYVCKLPGCTKRYTDPSSLRKHVKTV 27

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (119), Expect = 8e-10
 Identities = 21/30 (70%), Positives = 25/30 (83%), Gaps = 1/30 (3%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQ-RTHFD 64
          +PY C +EGC KAFSN+SDRAKHQ RTH +
Sbjct: 1  KPYMCEHEGCSKAFSNASDRAKHQNRTHSN 30

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (120), Expect = 8e-10
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTY 42
          F C + P C K+F+  ++LK H + H+  R Y C +
Sbjct: 2  FSCPE-PACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (113), Expect = 9e-09
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 38 YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMY 72
          +SC    C K+F+      +H + H DTR Y C +
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.9 bits (112), Expect = 9e-09
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          +RPYSC + GC KAF  + D  +H+++H
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (92), Expect = 8e-06
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGE 35
          + C   P C KAF R  +L  H++SH  +
Sbjct: 4  YSCD-HPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.2 bits (79), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          RPY C + GC K +     L +H K+H
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.6 bits (111), Expect = 1e-08
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
            R  TG +P+ C    C ++FS S   A H++ H
Sbjct: 2  STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 9e-04
 Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)

Query: 58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
            R     +P++C    C + ++    L  H K H
Sbjct: 2  STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRH 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (107), Expect = 6e-08
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          H+GE+PY C    C KAFS SS   +HQR H
Sbjct: 2  HSGEKPYGCVE--CGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 14/23 (60%), Positives = 14/23 (60%)

Query: 13 PHCAKAFSRLENLKIHQRSHTGE 35
            C KAFSR   L  HQR HTGE
Sbjct: 11 VECGKAFSRSSILVQHQRVHTGE 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 7e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT 65
          R+HTGE+PY+C++  C K F        H + + D 
Sbjct: 1  RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 6/23 (26%), Positives = 11/23 (47%)

Query: 13 PHCAKAFSRLENLKIHQRSHTGE 35
           HC K F + + L +H + +   
Sbjct: 12 SHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 60 RTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHN 93
          RTH   +PY C    C K +     L  H K ++
Sbjct: 1  RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYH 32

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 1e-07
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          RPY C ++GC+K F+ S++   H  TH
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 5e-05
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHT 33
          ++C  F  C K F++  NLK H  +H 
Sbjct: 3  YVCP-FDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          RPY C + GC K++   ++L+ H   H
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-07
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          ++ Y C    C K+F++ S R +H   H   RPY C    C K++     L  H K H
Sbjct: 1  DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-07
 Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 2/49 (4%)

Query: 14 HCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
           C K+F+       H   H G RPY C    C K F        H + H
Sbjct: 7  QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.2 bits (104), Expect = 1e-07
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
                 ++ + C + GC K F    +   H +TH
Sbjct: 9  KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
           +      R Y C  + C K+FS+SSD +KH+RTH
Sbjct: 3  SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 1e-04
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 56 AKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNH 92
           + +    + R YKC   G    ++  S L KH + H
Sbjct: 1  GRSEWQQRERRRYKCDECGK--SFSHSSDLSKHRRTH 35

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (103), Expect = 2e-07
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          RPY+C  E C + FS S+D  +H R H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTG 34
          + C     C + FSR  +L  H R HTG
Sbjct: 3  YACPV-ESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          RPY C  + C +R++  + L +H + H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (102), Expect = 3e-07
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 13 PHCAKAFSRLENLKIH-QRSHTGERPYSC 40
            C K FSR ++L  H ++ HT ERP+ C
Sbjct: 9  QSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 3e-06
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 33 TGERPYSCTYEGCHKAFSNSSDRAKH-QRTHFDTRPYKC 70
          +  +PY C    C K FS       H ++ H   RP+KC
Sbjct: 1  SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 3e-07
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          RP+ CT+  C K F+ S +  +H+RTH
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 9e-07
 Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGER 36
          F+C+ + +C K F+R + L+ H+R+HTGE+
Sbjct: 3  FMCT-WSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          RP+ C +  C KR+T    L++H + H
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 6e-07
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          +P+ CT+EGC K++S   +   H R+H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGE 35
            C+    C K++SRLENLK H RSHTGE
Sbjct: 3  HKCTF-EGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 8e-04
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          +P+KC ++GC K Y+   +L+ H ++H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 8e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 30 RSHTGERPYSCTYEGCHKAFSNSSDRAKH-QRTH 62
          R+H+GE+PY C    CH  F+ S     H  + H
Sbjct: 1  RTHSGEKPYECYI--CHARFTQSGTMKMHILQKH 32

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.1 bits (97), Expect = 2e-06
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 13 PHCAKAFSRLENLKIHQRSHTGER 36
            C +AF+R E+LK H RSHT E+
Sbjct: 6  EVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.9 bits (81), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          R + C    C +AF+      +H R+H
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSH 25

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 4e-06
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          +P+ CT+EGC K FS   +   H R H
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 1e-05
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 7  FLCSQFPHCAKAFSRLENLKIHQRSHTGE 35
          F C+    C K FS   NL+ H R HTG+
Sbjct: 3  FQCTF-EGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 66 RPYKCMYKGCTKRYTDPSSLRKHAKNH 92
          +P++C ++GC KR++   +LR H + H
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.4 bits (92), Expect = 6e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT 65
           +G+RP+ C    C  AF+  ++ A+H + H DT
Sbjct: 2  SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 7e-04
 Identities = 7/24 (29%), Positives = 9/24 (37%)

Query: 12 FPHCAKAFSRLENLKIHQRSHTGE 35
             C  AF+   N   H + HT  
Sbjct: 10 CRICLSAFTTKANCARHLKVHTDT 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 2e-05
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 13 PHCAKAFSRLENLKIHQRSHTGER 36
          P C K F R ++L  H ++H  ++
Sbjct: 6  PECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.003
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          + ++C    C K F  S   +KH +TH
Sbjct: 1  KKFACPE--CPKRFMRSDHLSKHIKTH 25

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 35 ERPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          ++P+ C    C + FS S     H RTH
Sbjct: 1  QKPFQCRI--CMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (84), Expect = 8e-05
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 13 PHCAKAFSRLENLKIHQRSHTG 34
            C + FSR ++L  H R+HTG
Sbjct: 7  RICMRNFSRSDHLTTHIRTHTG 28

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 34.3 bits (78), Expect = 4e-04
 Identities = 13/26 (50%), Positives = 20/26 (76%)

Query: 67 PYKCMYKGCTKRYTDPSSLRKHAKNH 92
          PY+C ++GC KR++ PS L++H K H
Sbjct: 3  PYECPHEGCDKRFSLPSRLKRHEKVH 28

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 4e-04
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 36 RPYSCTYEGCHKAFSNSSDRAKHQRTH 62
          +PY C    C KAFS +S    HQR H
Sbjct: 1  KPYKC--LECGKAFSQNSGLINHQRIH 25

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.64
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.22
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.19
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.16
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.15
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.14
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.14
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.12
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.09
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.08
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.06
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.04
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.03
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.02
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.0
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.0
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.99
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.99
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.95
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.85
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.83
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.8
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.74
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.54
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.49
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.23
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.21
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.2
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.14
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.02
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.95
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.92
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.74
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.7
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.57
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.53
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.5
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.49
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.46
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.4
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.4
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.38
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.32
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.27
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.24
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.17
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.04
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.04
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.04
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.04
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.02
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.95
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.93
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.9
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.88
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.87
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.64
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.49
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.38
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.3
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.26
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.19
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.12
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.09
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.04
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.92
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.79
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.76
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.52
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.38
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.26
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.25
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.21
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.12
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.05
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.04
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.62
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.46
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.06
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.68
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.25
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.48
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.7
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.74
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.5
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.22
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.34
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	84.76
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	82.5
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	80.64
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	80.56

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=8.2e-17  Score=91.51  Aligned_cols=45  Identities=36%  Similarity=0.707  Sum_probs=22.0

Q ss_pred             cccccccchhHHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhh
Q psy9954          45 CHKAFSNSSDRAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        45 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      ||+.|.....|..|+++|++++||.|..  |++.|...+.|..|+++
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTT
T ss_pred             CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhc
Confidence            4444444444444444444444444444  44444444444444444

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2e-16  Score=89.84  Aligned_cols=53  Identities=30%  Similarity=0.587  Sum_probs=49.5

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHc
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      .+||.|.    ||+.|.....|..|+++|++++||.|..  |++.|.....|..|+++|
T Consensus         1 EK~y~C~----Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ----CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT----TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC----CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            3789994    9999999999999999999999999965  999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1e-12  Score=68.34  Aligned_cols=36  Identities=39%  Similarity=0.763  Sum_probs=23.2

Q ss_pred             ccccccCCCCCcChhccCCHHHHHHHHH-hhCCCCceeec
Q psy9954           3 TIFDFLCSQFPHCAKAFSRLENLKIHQR-SHTGERPYSCT   41 (196)
Q Consensus         3 ~~~~~~C~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~   41 (196)
                      ..+||.|.   +||+.|...++|..|++ +|++++||+|.
T Consensus         2 ~~Kpy~C~---~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQ---SCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECS---SSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCC---CCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            34666666   46677766666766654 46666666664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=6e-13  Score=69.27  Aligned_cols=37  Identities=30%  Similarity=0.636  Sum_probs=27.7

Q ss_pred             HHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          57 KHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +|+++|++++||+|+.  |++.|...+.|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            4667777777777766  777777777777777777764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.5e-12  Score=66.79  Aligned_cols=35  Identities=29%  Similarity=0.649  Sum_probs=22.8

Q ss_pred             CCceeeccCccCccCCChHHHHHHhh-hcCCCCCCccc
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAK-NHNHDHLTPAK  101 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  101 (196)
                      ++||+|..  |++.|...+.|++|++ +|++++||+|+
T Consensus         3 ~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            56666655  6666666666666654 56666666665

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.1e-12  Score=65.97  Aligned_cols=34  Identities=38%  Similarity=0.784  Sum_probs=23.4

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHHhhCCCCceeec
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQRSHTGERPYSCT   41 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~   41 (196)
                      |.|. ++.||+.|.+.+.|++|+++|+|++||+|+
T Consensus         2 f~C~-~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCP-EPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECS-CTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECC-CCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            5565 555777777777777777777777777764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.3e-12  Score=65.82  Aligned_cols=33  Identities=36%  Similarity=0.733  Sum_probs=16.7

Q ss_pred             eeecccccccccccchhHHHHHHHcCCCCceee
Q psy9954          38 YSCTYEGCHKAFSNSSDRAKHQRTHFDTRPYKC   70 (196)
Q Consensus        38 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   70 (196)
                      |.|++++|++.|.++..|.+|+++|++++||+|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            444444455555555555555555555555554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=9.4e-12  Score=63.74  Aligned_cols=34  Identities=32%  Similarity=0.614  Sum_probs=23.5

Q ss_pred             HHcCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          60 RTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |+|+|++||+|..  |++.|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            3567777777766  777777777777777776654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=1.4e-12  Score=70.93  Aligned_cols=40  Identities=25%  Similarity=0.652  Sum_probs=21.1

Q ss_pred             HHHHHHHcCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          55 RAKHQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.+|++ |.+++||+|.+++|++.|...+.|..|+++|+++
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            344443 5555555555444555555555555555555554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1e-11  Score=61.96  Aligned_cols=31  Identities=32%  Similarity=0.705  Sum_probs=18.8

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |++++||+|..  |++.|...+.|..|+++|++
T Consensus         2 HTgekpy~C~~--Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSS--SCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCC--CCCEeCchHHhHhhccccCC
Confidence            55666666655  66666666666666666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.8e-12  Score=67.46  Aligned_cols=37  Identities=41%  Similarity=0.661  Sum_probs=32.5

Q ss_pred             HHHHhhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          27 IHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        27 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      +|+++|++++||.|..  ||+.|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            4778899999999954  999999999999999999886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=6.7e-12  Score=64.76  Aligned_cols=34  Identities=24%  Similarity=0.576  Sum_probs=21.6

Q ss_pred             HHHHcCCCCceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          58 HQRTHFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      |.|+|++++||+|..  |++.|...+.|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCc
Confidence            455666666666655  6666666666666666654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=2.7e-12  Score=69.76  Aligned_cols=43  Identities=21%  Similarity=0.573  Sum_probs=37.9

Q ss_pred             HHHHHHHHhhCCCCceeecccccccccccchhHHHHHHHcCCCC
Q psy9954          23 ENLKIHQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDTR   66 (196)
Q Consensus        23 ~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   66 (196)
                      ..|..|++ |.+++||.|.+++|++.|...++|..|+++|++++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34666774 99999999988889999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.2e-11  Score=60.71  Aligned_cols=33  Identities=52%  Similarity=0.864  Sum_probs=24.8

Q ss_pred             hhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          31 SHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        31 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      +|+|++||+|..  ||+.|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            477778888844  888888888888888877764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.7e-11  Score=59.07  Aligned_cols=31  Identities=32%  Similarity=0.851  Sum_probs=20.7

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      +||.|++++|++.|...+.|++|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            4666766667777777777777777766653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=9.7e-12  Score=64.14  Aligned_cols=35  Identities=34%  Similarity=0.719  Sum_probs=31.2

Q ss_pred             HHHhhCCCCceeecccccccccccchhHHHHHHHcCC
Q psy9954          28 HQRSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus        28 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      |.|+|+|++||+|..  |++.|..+++|.+|+++|..
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            678999999999955  99999999999999998864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=4.5e-11  Score=60.40  Aligned_cols=32  Identities=25%  Similarity=0.563  Sum_probs=21.7

Q ss_pred             cCCCCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          62 HFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |+|++||+|.+  |++.|...++|++|+++|++.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            45677777766  777777777777777776544

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=61.67  Aligned_cols=34  Identities=38%  Similarity=0.773  Sum_probs=28.8

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      |+|+|++||+|..  |++.|..+..|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            5788999999955  999999999999999888765

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=5.1e-11  Score=58.55  Aligned_cols=31  Identities=42%  Similarity=0.948  Sum_probs=21.2

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      +||.|. ++.||+.|.+.++|..|+++|+|++
T Consensus         1 kpf~C~-~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCT-WSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCC-STTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCc-CCCCCcCcCChhHhhhhcCcccccC
Confidence            466776 5667777777777777777777664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.1e-11  Score=57.44  Aligned_cols=30  Identities=33%  Similarity=0.891  Sum_probs=18.5

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +||.|++++|++.|...+.|++|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            456666666666666666666666666553

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.03  E-value=7.4e-11  Score=57.11  Aligned_cols=29  Identities=52%  Similarity=0.921  Sum_probs=22.1

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      +||.|.   +||+.|.+.+.|.+|+++|+|++
T Consensus         1 kp~~C~---~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCE---VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCT---TTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCC---CCCCCCCCchHcccccCcccCCC
Confidence            467776   58888888888888888888764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.2e-11  Score=60.80  Aligned_cols=31  Identities=29%  Similarity=0.770  Sum_probs=18.5

Q ss_pred             HcCCCCceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          61 THFDTRPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      +|+|++||+|++  |++.|...++|++|++.++
T Consensus         2 ~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYI--CHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCC--CcccccchHHHHHHccccc
Confidence            456666666655  6666666666666654433

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.1e-11  Score=58.05  Aligned_cols=29  Identities=34%  Similarity=0.906  Sum_probs=16.1

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      +||.|++++|++.|...+.|++|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            35555555555555555555555555544

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=5.8e-11  Score=57.86  Aligned_cols=30  Identities=47%  Similarity=0.759  Sum_probs=16.0

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      +||.|. .+.||+.|.+.++|..|+|+|+|+
T Consensus         1 kp~~C~-~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCT-FEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECC-STTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCC-CCCCCceECcHHHcCccccccCCC
Confidence            355554 334555555555555555555543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8.6e-11  Score=57.13  Aligned_cols=30  Identities=60%  Similarity=0.967  Sum_probs=17.4

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      +||.|. .+.||+.|.+.++|+.|+++|+|+
T Consensus         1 kp~~C~-~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCT-FEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCC-STTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCC-CCCCCceECChhHhhhhcCcCcCC
Confidence            355555 344666666666666666666553

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.1e-10  Score=56.40  Aligned_cols=29  Identities=31%  Similarity=0.717  Sum_probs=21.9

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      +||.|.   +||+.|.+.+.|..|+++|+|++
T Consensus         1 Kpy~C~---~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACP---ECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCT---TTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECC---cCCCeecchHHhhhhcCccCCcC
Confidence            467777   58888888888888888887764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.99  E-value=1.3e-10  Score=56.23  Aligned_cols=29  Identities=24%  Similarity=0.759  Sum_probs=19.5

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      +||.|++  |++.|...+.|.+|+++|++++
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            4667766  7777777777777777776654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=1.1e-10  Score=58.91  Aligned_cols=32  Identities=38%  Similarity=0.850  Sum_probs=20.6

Q ss_pred             hCCCCceeecccccccccccchhHHHHHHHcCCC
Q psy9954          32 HTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFDT   65 (196)
Q Consensus        32 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   65 (196)
                      |+|++||+|.+  |++.|..+.+|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            45666666644  666666666666666666543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=8.7e-11  Score=56.17  Aligned_cols=28  Identities=21%  Similarity=0.765  Sum_probs=18.3

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |+||+|+.  |++.|...+.|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            46666655  66666666666666666653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-10  Score=59.20  Aligned_cols=33  Identities=36%  Similarity=0.791  Sum_probs=27.1

Q ss_pred             HhhCCCCceeecccccccccccchhHHHHHHHcCC
Q psy9954          30 RSHTGERPYSCTYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus        30 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      |+|+|++||+|++  |++.|..+.+|.+|++.+++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccC
Confidence            4789999999966  99999999999999765443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=2.9e-10  Score=56.04  Aligned_cols=30  Identities=37%  Similarity=0.799  Sum_probs=18.1

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      |+||.|++++|++.|.+.+.|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            356666666666666666666666666543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.1e-10  Score=55.34  Aligned_cols=29  Identities=31%  Similarity=0.718  Sum_probs=18.3

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDH   96 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   96 (196)
                      +||.|..  |++.|...+.|.+|+++|++++
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            4566655  6666666666666666666553

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=3.4e-10  Score=54.08  Aligned_cols=27  Identities=44%  Similarity=0.843  Sum_probs=17.5

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTG   34 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~   34 (196)
                      +||.|.   +|++.|.+.++|..|+++|+|
T Consensus         2 KPy~C~---~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCR---ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECT---TTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCC---CCcCEecccccccccCCCccC
Confidence            566666   466666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=2.5e-10  Score=54.95  Aligned_cols=28  Identities=32%  Similarity=0.887  Sum_probs=16.8

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      +||.|++++|++.|...+.|++|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3566665566666666666666666554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.87  E-value=5.9e-10  Score=54.92  Aligned_cols=30  Identities=43%  Similarity=0.967  Sum_probs=20.7

Q ss_pred             CCceeecccccccccccchhHHHHHHHcCC
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      ++||.|.+++|++.|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            466777666677777777777777777654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=3.4e-10  Score=54.45  Aligned_cols=27  Identities=44%  Similarity=0.933  Sum_probs=13.9

Q ss_pred             ceeecccccccccccchhHHHHHHHcC
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHF   63 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   63 (196)
                      ||+|.+++|++.|.+.++|.+|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            455555555555555555555555543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=3.5e-10  Score=53.82  Aligned_cols=26  Identities=42%  Similarity=1.005  Sum_probs=12.7

Q ss_pred             ceeecccccccccccchhHHHHHHHc
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      ||.|++++|++.|.+.++|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            44454444555555555555554444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.9e-10  Score=53.00  Aligned_cols=27  Identities=37%  Similarity=1.029  Sum_probs=16.6

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhc
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      +||.|++++|++.|...++|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            356666666666666666666666655

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.6e-10  Score=51.17  Aligned_cols=26  Identities=46%  Similarity=0.691  Sum_probs=19.3

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      +||+|.   .|||.|...+.|..|+|+|+
T Consensus         1 KPy~C~---eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL---ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS---SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC---CCcCeeccCcccccCccCCC
Confidence            577777   47888888888888877773

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.4e-09  Score=50.66  Aligned_cols=25  Identities=40%  Similarity=0.922  Sum_probs=17.6

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhc
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      |||+|..  ||+.|...+.|.+|+++|
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCC
Confidence            4677755  777777777777777766

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.3e-08  Score=48.38  Aligned_cols=28  Identities=43%  Similarity=0.781  Sum_probs=25.3

Q ss_pred             CCcChhccCCHHHHHHHHHhhCCCCcee
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHTGERPYS   39 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~~~~~~~   39 (196)
                      |+.|||.|.....|.+|...|++++||.
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4479999999999999999999999983

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=5e-08  Score=45.23  Aligned_cols=29  Identities=66%  Similarity=1.158  Sum_probs=22.4

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      +||.|..++|++.+.+.++|+.|++++++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            57788877788888888888888877654

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4.6e-08  Score=43.24  Aligned_cols=24  Identities=50%  Similarity=0.843  Sum_probs=20.1

Q ss_pred             CCCcChhccCCHHHHHHHHHhhCC
Q psy9954          11 QFPHCAKAFSRLENLKIHQRSHTG   34 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~h~~   34 (196)
                      +|++|++.|.++..|+.|||.|+|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            356899999999999999998875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=5.5e-07  Score=39.92  Aligned_cols=26  Identities=46%  Similarity=0.813  Sum_probs=23.5

Q ss_pred             CCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954          11 QFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      ||+.|.+.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58899999999999999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.21  E-value=3.5e-07  Score=41.50  Aligned_cols=27  Identities=48%  Similarity=1.025  Sum_probs=19.5

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhc
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      .||+|+..+|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            367777777777777777777777665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.9e-07  Score=41.82  Aligned_cols=25  Identities=40%  Similarity=0.905  Sum_probs=12.1

Q ss_pred             ceeecccccccccccchhHHHHHHH
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRT   61 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~   61 (196)
                      ||.|.+++|++.+...++|.+|++.
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHHHh
Confidence            4444444444444444444444444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=5.3e-07  Score=41.09  Aligned_cols=27  Identities=22%  Similarity=0.719  Sum_probs=19.4

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      ++||.|.+  ||+.|......++|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            46777766  7777777777777777663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6.5e-07  Score=39.45  Aligned_cols=24  Identities=29%  Similarity=0.647  Sum_probs=14.0

Q ss_pred             eeeccCccCccCCChHHHHHHhhhcC
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      .+|+.  |++.|+++..|+.|++.|+
T Consensus         2 hkc~~--c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEV--CGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTT--TTBCCCCHHHHHHHGGGCC
T ss_pred             Cccch--hhhHhcchhHHHHHhhccC
Confidence            45555  6666666666666666554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=7.2e-07  Score=40.66  Aligned_cols=27  Identities=33%  Similarity=0.989  Sum_probs=16.7

Q ss_pred             CCceeecccccccccccchhHHHHHHHcC
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTHF   63 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   63 (196)
                      ++||.|.+  ||+.|......++|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            35666654  6666666666666666653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.9e-06  Score=40.78  Aligned_cols=31  Identities=23%  Similarity=0.460  Sum_probs=22.8

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCCCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHDHLT   98 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (196)
                      +...|+.  ||+.|.+...|++|...|++++||
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            4456766  777777777777777777777776

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.06  E-value=1.2e-06  Score=39.72  Aligned_cols=27  Identities=44%  Similarity=0.894  Sum_probs=21.0

Q ss_pred             CceeecccccccccccchhHHHHHHHc
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      .||+|+.++|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            577887777888888888888887765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.4e-06  Score=38.59  Aligned_cols=29  Identities=34%  Similarity=0.717  Sum_probs=22.1

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      ++||+|..  |.+.....+.|..|++.|+++
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            46788877  888888888888888877764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.1e-06  Score=39.69  Aligned_cols=28  Identities=25%  Similarity=0.723  Sum_probs=17.4

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      ++||.|++  |+..|.++..+..|.+.|.+
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccC
Confidence            35666655  66666666666666666544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.5e-06  Score=40.52  Aligned_cols=23  Identities=78%  Similarity=1.307  Sum_probs=11.4

Q ss_pred             ceeecccccccccccchhHHHHH
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQ   59 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~   59 (196)
                      ||.|.+++|.+.|...++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            44554444555555554444443

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.7e-06  Score=38.23  Aligned_cols=22  Identities=55%  Similarity=0.792  Sum_probs=19.1

Q ss_pred             cChhccCCHHHHHHHHHhhCCC
Q psy9954          14 HCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      .|||.|...+.|++|...|+|+
T Consensus         7 ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           7 ECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             TTCCEESSHHHHHHHGGGTSCC
T ss_pred             HHhHHHHHHHHHHHHhhcccCC
Confidence            5999999999999998888875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=3.6e-06  Score=38.83  Aligned_cols=27  Identities=33%  Similarity=0.685  Sum_probs=15.2

Q ss_pred             CceeecccccccccccchhHHHHHHHcCC
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      +||.|++  |+..|..++.+..|.+.|.|
T Consensus         2 kp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccch--HHHHhhccccceEeeecccC
Confidence            4555544  55555555555555555544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=3.6e-06  Score=39.22  Aligned_cols=29  Identities=34%  Similarity=0.881  Sum_probs=24.1

Q ss_pred             CceeeccCccCccCCChHHHHHHh-hhcCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHA-KNHNH   94 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~   94 (196)
                      +||.|++++|.|.|+..+....|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            588888888999998888888887 77764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.6e-05  Score=35.99  Aligned_cols=27  Identities=33%  Similarity=0.646  Sum_probs=20.7

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHHhhCCCC
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQRSHTGER   36 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~~h~~~~   36 (196)
                      |.|.   .||.....++-|+.|+|+|++++
T Consensus         2 YvC~---~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICE---ECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCT---TTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             cccc---ccCcccCCHHHHHHHHHHhcCCC
Confidence            5555   68888888888888888888764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.70  E-value=7.2e-06  Score=37.25  Aligned_cols=29  Identities=31%  Similarity=0.760  Sum_probs=17.3

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      +||.|...+|.+.|.+...|.+|..+|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            35666655666666666666666555544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.4e-05  Score=36.04  Aligned_cols=27  Identities=41%  Similarity=0.646  Sum_probs=14.3

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTG   34 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~   34 (196)
                      +||.|.   .|...-...+.|..|+|.|+|
T Consensus         2 rpfkcq---lcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQ---ICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECS---SSSCEESSHHHHHHHHTTCCS
T ss_pred             Ccceee---ecccccCCchheEEeeecccC
Confidence            355555   455555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=3.3e-05  Score=34.44  Aligned_cols=26  Identities=46%  Similarity=0.837  Sum_probs=18.6

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      +||+|..  |.+.-.+.++|+.|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            5677766  7777777777777777764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.53  E-value=2.5e-05  Score=35.46  Aligned_cols=28  Identities=36%  Similarity=0.795  Sum_probs=15.4

Q ss_pred             ceeecccccccccccchhHHHHHHHcCC
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRTHFD   64 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   64 (196)
                      ||.|..++|.+.|.+.-.|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            4555555555555555555555555544

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.1e-05  Score=38.09  Aligned_cols=28  Identities=32%  Similarity=0.820  Sum_probs=19.7

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhhc
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      ++||.|..++|+.+|.....|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            5677777677777777777777776655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=4.7e-05  Score=33.00  Aligned_cols=24  Identities=33%  Similarity=0.874  Sum_probs=18.4

Q ss_pred             eeeccCccCccCCChHHHHHHhhhcC
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      |+|..  |.+.|..++.|.+|++.|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            57766  8888888888888887764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5.4e-05  Score=34.24  Aligned_cols=26  Identities=38%  Similarity=0.700  Sum_probs=15.4

Q ss_pred             eeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      |.|+.  |+....-++-|+.|+++|+++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            45555  666666666666666666554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=5.6e-05  Score=34.35  Aligned_cols=26  Identities=38%  Similarity=0.866  Sum_probs=18.2

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      +||.|..  |.....+.++|+.|+++.+
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccc--cccccccchhhhhhhhccc
Confidence            4677776  7777777777777776544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.6e-05  Score=37.99  Aligned_cols=25  Identities=32%  Similarity=0.541  Sum_probs=15.9

Q ss_pred             CccccccCCCCCcChhccCCHHHHHHHH
Q psy9954           2 TTIFDFLCSQFPHCAKAFSRLENLKIHQ   29 (196)
Q Consensus         2 t~~~~~~C~~C~~C~k~f~~~~~L~~H~   29 (196)
                      |+++||.|.   +|+|.|-....+.+|.
T Consensus         1 TGiKPYeC~---~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECN---ICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECS---SSCCEESCHHHHHHHH
T ss_pred             CCCCceecc---chhhhhhhHHHHHHhh
Confidence            566666666   5666666666666653

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=4.6e-05  Score=36.64  Aligned_cols=29  Identities=38%  Similarity=0.834  Sum_probs=17.5

Q ss_pred             cccCCCCCcCh---hccCCHHHHHHHHHhhCCC
Q psy9954           6 DFLCSQFPHCA---KAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         6 ~~~C~~C~~C~---k~f~~~~~L~~H~~~h~~~   35 (196)
                      .|.|. +..|.   +.|...+.|..|||.|+|+
T Consensus         2 ~y~C~-W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCH-WGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCC-BTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEE-CCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            45565 45554   3466666677777766654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.00011  Score=32.78  Aligned_cols=20  Identities=30%  Similarity=0.659  Sum_probs=10.1

Q ss_pred             cCccCCChHHHHHHhhhcCC
Q psy9954          75 CTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        75 C~~~f~~~~~l~~H~~~h~~   94 (196)
                      ||+.|...+.|++|+..|++
T Consensus         8 cgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           8 CGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TCCEESSHHHHHHHGGGTSC
T ss_pred             HhHHHHHHHHHHHHhhcccC
Confidence            55555555555555544443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00012  Score=35.94  Aligned_cols=28  Identities=36%  Similarity=0.845  Sum_probs=16.9

Q ss_pred             CCceeecccccccccccchhHHHHHHHc
Q psy9954          35 ERPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        35 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      ++||.|..++|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            5566666666666666666666665544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00014  Score=33.04  Aligned_cols=18  Identities=28%  Similarity=0.375  Sum_probs=9.4

Q ss_pred             cChhccCCHHHHHHHHHh
Q psy9954          14 HCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~   31 (196)
                      +|.......++|+.|+++
T Consensus         7 yc~yrsadssnlkthikt   24 (30)
T d1klra_           7 YCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             SSSCCCSCSHHHHHHHHH
T ss_pred             ccccccccchhhhhhhhc
Confidence            455555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.17  E-value=0.00015  Score=35.81  Aligned_cols=28  Identities=25%  Similarity=0.542  Sum_probs=16.2

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      +.|.|.   +|++.|.+...|-.||+.|..+
T Consensus         4 r~~~C~---~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCS---FCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECT---TTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCC---CCCCccCCcccccchHhhhcch
Confidence            345555   5666666666666666666443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00016  Score=31.78  Aligned_cols=25  Identities=24%  Similarity=0.632  Sum_probs=14.9

Q ss_pred             eeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          69 KCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +|+.  |.+.|.++..|+.|-+.|+++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCC
Confidence            3544  666666666666666666554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00023  Score=32.04  Aligned_cols=19  Identities=42%  Similarity=0.781  Sum_probs=7.4

Q ss_pred             ChhccCCHHHHHHHHHhhC
Q psy9954          15 CAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        15 C~k~f~~~~~L~~H~~~h~   33 (196)
                      |...|++.-.|+.||-.|+
T Consensus        10 cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3          10 CQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             SCCEESSHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhheeeeeccc
Confidence            3333333333333333333

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00026  Score=31.46  Aligned_cols=25  Identities=44%  Similarity=0.816  Sum_probs=13.3

Q ss_pred             CceeecccccccccccchhHHHHHHHc
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      +||+|..  |.+.-...++|..|++.|
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHS
T ss_pred             CCccccc--ccchhcchhhHhhhhhcc
Confidence            4555543  555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00023  Score=35.37  Aligned_cols=25  Identities=32%  Similarity=0.800  Sum_probs=20.7

Q ss_pred             CCCceeeccCccCccCCChHHHHHHhh
Q psy9954          64 DTRPYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        64 ~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      |-+||.|..  |++.|....++.+|.-
T Consensus         2 GiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCceeccc--hhhhhhhHHHHHHhhh
Confidence            568899977  9999999988888864

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00029  Score=31.77  Aligned_cols=23  Identities=39%  Similarity=0.948  Sum_probs=14.9

Q ss_pred             ceeeccCccCccCCChHHHHHHhhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      ||.|..  |...|.++.+|..||+.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            466655  66666666666666654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00015  Score=34.85  Aligned_cols=16  Identities=19%  Similarity=0.316  Sum_probs=7.7

Q ss_pred             CCChHHHHHHhhhcCC
Q psy9954          79 YTDPSSLRKHAKNHNH   94 (196)
Q Consensus        79 f~~~~~l~~H~~~h~~   94 (196)
                      |.....|..|+|+|++
T Consensus        17 f~a~YkLv~H~R~HTg   32 (33)
T d2glia2          17 FKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CSSHHHHHHHTHHHHC
T ss_pred             chhHHHHHHHHhhcCC
Confidence            4444445555554443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00021  Score=32.37  Aligned_cols=27  Identities=44%  Similarity=0.899  Sum_probs=19.9

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      +||+|.+  |.......++|..|++.-++
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccce--ecccccCcchHHHHHHHHcc
Confidence            4788877  88877888888888765444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.00035  Score=31.42  Aligned_cols=26  Identities=23%  Similarity=0.560  Sum_probs=13.2

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcCC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHNH   94 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   94 (196)
                      .|.|..  |...|.+.-.|+.||..|++
T Consensus         4 vftcs~--cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSV--CQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHH--HHHHHHHHHhheeeeecccC
Confidence            345544  55555555555555555443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.90  E-value=0.00034  Score=30.22  Aligned_cols=20  Identities=35%  Similarity=0.630  Sum_probs=13.1

Q ss_pred             cChhccCCHHHHHHHHHhhC
Q psy9954          14 HCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~h~   33 (196)
                      .|.+.|..++.|.+|++.|.
T Consensus         5 lcersfveksalsrhqrvhk   24 (26)
T d1znfa_           5 LCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             SSCCBCSSHHHHHHHGGGTC
T ss_pred             chHHHHHHHHHHHHHHHhhc
Confidence            56666666666666666653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00038  Score=31.11  Aligned_cols=25  Identities=48%  Similarity=0.875  Sum_probs=21.6

Q ss_pred             eeeccCccCccCCChHHHHHHhhhc
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      ..|+..+|++.|.+.+.++.|+-+|
T Consensus         2 i~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           2 IACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             ccCCcccHHHHhhchHHHHHHhhcc
Confidence            3578888999999999999998876

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.87  E-value=0.00054  Score=33.75  Aligned_cols=28  Identities=29%  Similarity=0.801  Sum_probs=16.1

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcCCC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHNHD   95 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   95 (196)
                      +.|+|.+  |++.|.+...|--||+.|..+
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcch
Confidence            3456655  666666666666666655443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00061  Score=30.68  Aligned_cols=23  Identities=39%  Similarity=0.993  Sum_probs=13.6

Q ss_pred             ceeecccccccccccchhHHHHHHH
Q psy9954          37 PYSCTYEGCHKAFSNSSDRAKHQRT   61 (196)
Q Consensus        37 ~~~C~~~~C~~~f~~~~~l~~H~~~   61 (196)
                      ||.|..  |+..|.++.+|..||+.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            455644  66666666666666653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.49  E-value=0.001  Score=30.75  Aligned_cols=23  Identities=35%  Similarity=0.821  Sum_probs=18.1

Q ss_pred             ceeeccCccCccCCChHHHHHHhhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      ||.|.+  |++.|.++..|.+|...
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTT
T ss_pred             Cccccc--ccchhhHHHHHHHHHHH
Confidence            678877  88888888888888653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0011  Score=29.74  Aligned_cols=23  Identities=26%  Similarity=0.699  Sum_probs=19.6

Q ss_pred             eeccCccCccCCChHHHHHHhhh
Q psy9954          69 KCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      .|++++|++.|+.+..|+.|.+-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            58888899999999999988764

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0012  Score=29.24  Aligned_cols=21  Identities=33%  Similarity=0.757  Sum_probs=18.5

Q ss_pred             CCCcChhccCCHHHHHHHHHh
Q psy9954          11 QFPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        11 ~C~~C~k~f~~~~~L~~H~~~   31 (196)
                      |||.|+....+++.|+.|++.
T Consensus         4 qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           4 HCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHHH
T ss_pred             cCCcchhheeehhhhhHHhhh
Confidence            466899999999999999886

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.26  E-value=0.0012  Score=30.42  Aligned_cols=17  Identities=35%  Similarity=0.626  Sum_probs=8.9

Q ss_pred             cChhccCCHHHHHHHHH
Q psy9954          14 HCAKAFSRLENLKIHQR   30 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~   30 (196)
                      +|++.|.+...|.+|..
T Consensus         6 ~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           6 LCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             TTCCEESSHHHHHHHHT
T ss_pred             cccchhhHHHHHHHHHH
Confidence            45555555555555543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.19  E-value=0.0014  Score=30.00  Aligned_cols=25  Identities=24%  Similarity=0.650  Sum_probs=9.9

Q ss_pred             eeecccccccccccchhHHHHHHHc
Q psy9954          38 YSCTYEGCHKAFSNSSDRAKHQRTH   62 (196)
Q Consensus        38 ~~C~~~~C~~~f~~~~~l~~H~~~h   62 (196)
                      |.|..++|+..|.....|..|+-.|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckH   28 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKH   28 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHH
T ss_pred             eEeeCCCcchhhccchhhhHHhhhh
Confidence            3343334444444333444443333

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.12  E-value=0.0018  Score=29.63  Aligned_cols=31  Identities=35%  Similarity=0.775  Sum_probs=28.0

Q ss_pred             cccccCCCCCcChhccCCHHHHHHHHHhhCCC
Q psy9954           4 IFDFLCSQFPHCAKAFSRLENLKIHQRSHTGE   35 (196)
Q Consensus         4 ~~~~~C~~C~~C~k~f~~~~~L~~H~~~h~~~   35 (196)
                      ++.|.|+ -+.|+-.|...-.|..|+-.|+|+
T Consensus         1 ~k~~iCs-f~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           1 MKRYICS-FADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCCEECS-SGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CCceEee-CCCcchhhccchhhhHHhhhhcCC
Confidence            3679999 899999999999999999999875

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.09  E-value=0.0019  Score=27.79  Aligned_cols=22  Identities=27%  Similarity=0.673  Sum_probs=14.9

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQR   30 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~   30 (196)
                      ||.|+   .|...|-++..|+.||.
T Consensus         2 pykcs---scsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCS---SCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECS---SSCCEESSHHHHHHHHH
T ss_pred             CCccc---HHHHHHHHHHHHHHHHH
Confidence            56666   37777777777777764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.0022  Score=28.29  Aligned_cols=22  Identities=41%  Similarity=0.776  Sum_probs=13.5

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHH
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQR   30 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~   30 (196)
                      ||.|.+   |||.+-++.+|..|..
T Consensus         1 pf~c~k---cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK---CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT---TCCBCSSHHHHHHHHH
T ss_pred             CCcccc---chhhhhhHhHHHHHHH
Confidence            455553   6666666666666643

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0027  Score=28.16  Aligned_cols=22  Identities=32%  Similarity=0.564  Sum_probs=17.4

Q ss_pred             CCcChhccCCHHHHHHHHHhhC
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      |+.|.....++..|+.|.|+|.
T Consensus         5 c~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           5 CSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             CSSSSCEESSHHHHHHHHGGGC
T ss_pred             CcccccccCcHHHHHHhhcccc
Confidence            4568888888888888888875

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.79  E-value=0.002  Score=28.30  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=14.2

Q ss_pred             eeeccCccCccCCChHHHHHHhhhc
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      |.|.+.+|++.|.....|+.|+-+|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            4455555666666666666665444

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0037  Score=29.45  Aligned_cols=26  Identities=35%  Similarity=0.823  Sum_probs=20.2

Q ss_pred             cccCCCCCcChhccCCHHHHHHHHHhhCC
Q psy9954           6 DFLCSQFPHCAKAFSRLENLKIHQRSHTG   34 (196)
Q Consensus         6 ~~~C~~C~~C~k~f~~~~~L~~H~~~h~~   34 (196)
                      -|.|++   |||.|.+...+.+|...-.|
T Consensus         4 afvcsk---cgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSK---CGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSS---SCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecc---cccchhcchHHHHHhhhcCC
Confidence            477885   99999999888888766444

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0045  Score=31.75  Aligned_cols=22  Identities=27%  Similarity=0.549  Sum_probs=19.1

Q ss_pred             CCcChhccCCHHHHHHHHHhhC
Q psy9954          12 FPHCAKAFSRLENLKIHQRSHT   33 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h~   33 (196)
                      |.+|||.|+....|+.|...|-
T Consensus         9 CG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           9 CGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ccccccccCCHHHHhHhHHhcC
Confidence            3489999999999999988774

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0038  Score=32.03  Aligned_cols=26  Identities=35%  Similarity=0.662  Sum_probs=22.6

Q ss_pred             CceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      ..|.|..  |+|.|.+...|++|...|-
T Consensus         5 ~l~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccc--cccccCCHHHHhHhHHhcC
Confidence            3589988  9999999999999988763

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.26  E-value=0.0066  Score=26.60  Aligned_cols=25  Identities=48%  Similarity=1.026  Sum_probs=14.0

Q ss_pred             ccCCCCCcChhccCCHHHHHHHHHhh
Q psy9954           7 FLCSQFPHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus         7 ~~C~~C~~C~k~f~~~~~L~~H~~~h   32 (196)
                      |.|. .+.|++.|..-..|+.|+-+|
T Consensus         2 yvch-fe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCH-FENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECC-STTCCCEESSHHHHHHHHHHH
T ss_pred             eEEE-ecCchHHHhhccceEEEeecc
Confidence            4444 445666666666666665554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0099  Score=26.29  Aligned_cols=25  Identities=32%  Similarity=0.614  Sum_probs=15.3

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      |-+|+.  |.+..+.+..|+.|.|+|.
T Consensus         2 pekc~e--csyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSE--CSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred             CccCcc--cccccCcHHHHHHhhcccc
Confidence            345644  6666666666666666654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.21  E-value=0.0086  Score=25.64  Aligned_cols=21  Identities=33%  Similarity=0.937  Sum_probs=13.1

Q ss_pred             ceeeccCccCccCCChHHHHHHh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHA   89 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~   89 (196)
                      ||+|.-  |...|..+..|..||
T Consensus         2 pykcss--csqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHH
Confidence            566644  666666666666665

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.12  E-value=0.0082  Score=25.83  Aligned_cols=20  Identities=35%  Similarity=0.737  Sum_probs=17.6

Q ss_pred             CCcChhccCCHHHHHHHHHh
Q psy9954          12 FPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~   31 (196)
                      ||.|-+.|.++.++..|.+.
T Consensus         4 cp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           4 CPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CTTTCCEESCHHHHHHHHHH
T ss_pred             CchhhHHhccccCceEEEEE
Confidence            56899999999999999875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.05  E-value=0.0088  Score=26.28  Aligned_cols=22  Identities=32%  Similarity=0.708  Sum_probs=16.0

Q ss_pred             ceeeccCccCccCCChHHHHHHhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      ||+|..  ||+.+-++.+|..|..
T Consensus         1 pf~c~k--cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHH
Confidence            577765  7777777777777764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.04  E-value=0.0085  Score=25.77  Aligned_cols=22  Identities=32%  Similarity=0.774  Sum_probs=16.5

Q ss_pred             eeeccCccCccCCChHHHHHHhhh
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |.|++  |-+.|.++.++..|.+.
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            67777  88888888877777664

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.63  E-value=0.019  Score=25.66  Aligned_cols=24  Identities=29%  Similarity=0.754  Sum_probs=16.4

Q ss_pred             ceeeccCccCccCCChHHHHHHhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      .|+|+.++|+-.|.++.+++.|..
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHh
Confidence            466666667777777777777754

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.012  Score=26.35  Aligned_cols=18  Identities=22%  Similarity=0.329  Sum_probs=9.2

Q ss_pred             cChhccCCHHHHHHHHHh
Q psy9954          14 HCAKAFSRLENLKIHQRS   31 (196)
Q Consensus        14 ~C~k~f~~~~~L~~H~~~   31 (196)
                      .|..--++.++|..|++.
T Consensus         7 ~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           7 YCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SSSCEESSHHHHHHHHHH
T ss_pred             eecccccCcchHHHHHHH
Confidence            455555555555555443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.016  Score=25.50  Aligned_cols=24  Identities=21%  Similarity=0.474  Sum_probs=19.0

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhc
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNH   92 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (196)
                      .|.|+.  |+....+++.|..|++.-
T Consensus         2 k~qcph--c~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHHT
T ss_pred             CccCCc--chhheeehhhhhHHhhhc
Confidence            478877  888888888888888753

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.06  E-value=0.043  Score=25.67  Aligned_cols=25  Identities=28%  Similarity=0.666  Sum_probs=17.9

Q ss_pred             ceeeccCccCccCCChHHHHHHhhhcC
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKNHN   93 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (196)
                      .|.|..  |++.|.++..+.+|...-.
T Consensus         4 afvcsk--cgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHHHCC
T ss_pred             eeeecc--cccchhcchHHHHHhhhcC
Confidence            477766  8888888888877766543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.68  E-value=0.049  Score=24.05  Aligned_cols=20  Identities=25%  Similarity=0.532  Sum_probs=15.7

Q ss_pred             CcChhccCCHHHHHHHHHhh
Q psy9954          13 PHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus        13 ~~C~k~f~~~~~L~~H~~~h   32 (196)
                      ..|+|.|+..+.++.|+.+|
T Consensus         7 kgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           7 KGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TTCCCEESSHHHHHHHHGGG
T ss_pred             ccHHHHhhchHHHHHHhhcc
Confidence            35888888888888888776

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.098  Score=23.26  Aligned_cols=21  Identities=29%  Similarity=0.564  Sum_probs=17.5

Q ss_pred             CCcChhccCCHHHHHHHHHhh
Q psy9954          12 FPHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h   32 (196)
                      |..|||..++...++-|+...
T Consensus         5 c~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           5 CHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CSSSCCCCSSHHHHHHHHHHH
T ss_pred             chhHHHHHhhccCceEEEeec
Confidence            458999999999999997653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.48  E-value=0.12  Score=26.16  Aligned_cols=21  Identities=24%  Similarity=0.407  Sum_probs=18.3

Q ss_pred             CCcChhccCCHHHHHHHHHhh
Q psy9954          12 FPHCAKAFSRLENLKIHQRSH   32 (196)
Q Consensus        12 C~~C~k~f~~~~~L~~H~~~h   32 (196)
                      ||+|+....+..+|++|+..-
T Consensus        27 cpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          27 CPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CTTTCCEESSHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHH
Confidence            779999999999999998763

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.70  E-value=0.098  Score=24.17  Aligned_cols=23  Identities=39%  Similarity=0.691  Sum_probs=17.3

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHH
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQR   30 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~   30 (196)
                      -.|+|.   -||-.|.+.+.|..|+.
T Consensus         7 arf~c~---pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCL---PCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCT---TTCCBCSCHHHHHHHTT
T ss_pred             cceecc---ccceeecChhHHHhhhh
Confidence            356666   58888888888888854

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.74  E-value=0.054  Score=30.32  Aligned_cols=24  Identities=42%  Similarity=0.486  Sum_probs=19.6

Q ss_pred             ccccCCCCCcChhccCCHHHHHHHHHh
Q psy9954           5 FDFLCSQFPHCAKAFSRLENLKIHQRS   31 (196)
Q Consensus         5 ~~~~C~~C~~C~k~f~~~~~L~~H~~~   31 (196)
                      -.|.|-   .|++.|.+...|..|+++
T Consensus        14 gqfYCv---~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCL---ACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEET---TTTEECSSHHHHHHHTTC
T ss_pred             CEEecc---cccCccCCHHHHHHHHcc
Confidence            346666   799999999999999764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.50  E-value=0.25  Score=22.75  Aligned_cols=23  Identities=26%  Similarity=0.709  Sum_probs=18.0

Q ss_pred             CceeeccCccCccCCChHHHHHHhh
Q psy9954          66 RPYKCMYKGCTKRYTDPSSLRKHAK   90 (196)
Q Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~   90 (196)
                      ..|.|.-  ||-+|++.+.|..|+.
T Consensus         7 arf~c~p--cgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTT--TCCBCSCHHHHHHHTT
T ss_pred             cceeccc--cceeecChhHHHhhhh
Confidence            4578855  8888988888888864

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.22  E-value=0.13  Score=28.69  Aligned_cols=23  Identities=22%  Similarity=0.716  Sum_probs=19.9

Q ss_pred             ceeeccCccCccCCChHHHHHHhhh
Q psy9954          67 PYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      .|-|..  |++.|.+...|..|+++
T Consensus        15 qfYCv~--C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLA--CARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETT--TTEECSSHHHHHHHTTC
T ss_pred             EEeccc--ccCccCCHHHHHHHHcc
Confidence            488977  99999999999999865

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.34  E-value=0.36  Score=21.35  Aligned_cols=22  Identities=18%  Similarity=0.540  Sum_probs=15.1

Q ss_pred             eeeccCccCccCCChHHHHHHhhh
Q psy9954          68 YKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |.|..  |++...+...++.|.-.
T Consensus         3 ftc~h--cgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHH--CGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSS--SCCCCSSHHHHHHHHHH
T ss_pred             eechh--HHHHHhhccCceEEEee
Confidence            66766  77777777777777543

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.76  E-value=0.4  Score=22.00  Aligned_cols=22  Identities=23%  Similarity=0.776  Sum_probs=13.7

Q ss_pred             eccCccCccCCChHHHHHHhhh
Q psy9954          70 CMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        70 C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      |.+.+|+..|.+...|..|+..
T Consensus         4 ChW~~C~~eFdtQd~LV~Hinn   25 (32)
T d2glia1           4 CRWDGCSQEFDSQEQLVHHINS   25 (32)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHH
T ss_pred             ccccccccccCCHHHHHHHccc
Confidence            4455566666666666666643

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.50  E-value=0.68  Score=23.28  Aligned_cols=25  Identities=24%  Similarity=0.507  Sum_probs=15.8

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhh
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      +.|-.|+.  |+.......+|++|...
T Consensus        22 ~qpatcpi--c~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPI--CYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTT--TCCEESSHHHHHHHHHH
T ss_pred             cCCCCCch--HHHHHHHHHHHHHHHHH
Confidence            45666665  66666666666666553

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.64  E-value=0.78  Score=21.40  Aligned_cols=25  Identities=28%  Similarity=0.639  Sum_probs=18.8

Q ss_pred             CCceeeccCccCccCCChHHHHHHhhh
Q psy9954          65 TRPYKCMYKGCTKRYTDPSSLRKHAKN   91 (196)
Q Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (196)
                      .+.|.|++  |-+-..+...|.+|+..
T Consensus         5 pkLyiCEf--CLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEF--CLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSS--SCCEESCHHHHHHHHHH
T ss_pred             Ceeeeehh--hhhhhCCHHHHHHHHHh
Confidence            35678888  88888888888888753

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.56  E-value=0.81  Score=23.58  Aligned_cols=24  Identities=38%  Similarity=0.811  Sum_probs=11.3

Q ss_pred             CceeecccccccccccchhHHHHH
Q psy9954          36 RPYSCTYEGCHKAFSNSSDRAKHQ   59 (196)
Q Consensus        36 ~~~~C~~~~C~~~f~~~~~l~~H~   59 (196)
                      +||.|-..+|...|....+|..|.
T Consensus        19 rpyrcvhqgc~aaftiq~nlilhy   42 (61)
T d1x3ca1          19 RPYRCVHQGCFAAFTIQQNLILHY   42 (61)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHH
T ss_pred             CceeeeccchhhhhhhhhhHHHHH
Confidence            344444444444444444444443