Domain ID e1lyw.3

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: Asp
UID: 000020681
Type: Automatic domain
Parent: e3qvcA1
Range: E:3-97,F:106-346
Ligands: EPE
PDB: 1lyw
PDB Description: CATHEPSIN D
UniProt: P07339
Hsap BLAST neighbor: P07339
Species:

Structure of domain e1lyw.3

Structural contacts of domain e1lyw.3 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1lyw.3 F:x,y,z->E:X,Y,Z RIFT-related Interaction Interface Pymol
e1lyw.3 E:X,Y,Z->F:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.2 F:X,Y,Z->H:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.3 F:x,y,z->E:-X+2,-Y+1,Z RIFT-related Interaction Interface Pymol
e1lyw.3 E:-X+2,-Y+1,Z->F:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.3 F:x,y,z->F:-X+2,-Y+1,Z RIFT-related Interaction Interface Pymol
e1lyw.3 F:-X+2,-Y+1,Z->F:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.2 E:X,Y,Z->H:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.2 F:x,y,z->G:X,Y,Z RIFT-related Interaction Interface Pymol
e1lyw.1 F:-X+5/2,Y-1/2,-Z+1->B:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.1 E:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1lyw.2 E:X,Y,Z->G:x,y,z RIFT-related Interaction Interface Pymol
e1lyw.2 E:-X+2,-Y+1,Z->G:x,y,z RIFT-related Interaction Interface Pymol