Domain ID e1rd3.1

Download files:
  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Trypsin,Thrombin_light
UID: 000022668
Type: Automatic domain
Parent: e1h8d.1
Range: A:1C-14K,B:16-247
Ligands: GOL PO4
PDB: 1rd3
PDB Description: Prothrombin
UniProt: P00734
Hsap BLAST neighbor: P00734
Species:

Structure of domain e1rd3.1

Structural contacts of domain e1rd3.1 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rd3.1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1rd3.1 A:X,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e1rd3.2 B:X,Y,Z->D:x,y,z RIFT-related Interaction Interface Pymol
e1rd3.2 B:x,y,z->D:X-1,Y,Z RIFT-related Interaction Interface Pymol
e1rd3.2 A:x,y,z->D:-X+3/2,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1rd3.1 B:x,y,z->B:X-1/2,-Y+1/2,-Z RIFT-related Interaction Interface Pymol
e1rd3.1 B:X-1/2,-Y+1/2,-Z->B:x,y,z RIFT-related Interaction Interface Pymol
e1rd3.2 B:x,y,z->D:X-1/2,-Y+1/2,-Z RIFT-related Interaction Interface Pymol
e1rd3.2 B:x,y,z->C:X-1,Y,Z RIFT-related Interaction Interface Pymol
e1rd3.2 B:x,y,z->C:X-1/2,-Y+1/2,-Z RIFT-related Interaction Interface Pymol