ECOD: domain e3bt1B1

Domain ID e3bt1B1

A: few secondary structure elements
X: Somatomedin B domain
H: Somatomedin B domain
T: Somatomedin B domain
F: Somatomedin_B

UID:	000092113
Type:	Automatic domain
Parent:	e1oc0B1
Range:	B:3-39
PDB:	3bt1
PDB Description:	Vitronectin
UniProt:	P04004
Hsap BLAST neighbor:	P04004
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3bt1B1

Domains in the same chain:

Download Pymol

e3bt1B1	B:3-39	Somatomedin B domain	Somatomedin B domain	Somatomedin B domain

Domains in the same PDB:

e3bt1A2	A:10-49	EGF-like	EGF-related	EGF/Laminin
e3bt1A1	A:50-132	Kringle-like	Kringle-like	Kringle-like
e3bt1B1	B:3-39	Somatomedin B domain	Somatomedin B domain	Somatomedin B domain
e3bt1U1	U:1-80	Snake toxin-like	Snake toxin-like	Snake toxin-like
e3bt1U3	U:92-188	Snake toxin-like	Snake toxin-like	Snake toxin-like
e3bt1U2	U:189-275	Snake toxin-like	Snake toxin-like	Snake toxin-like

Structural contacts of domain e3bt1B1 of H-group "Somatomedin B domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bt1U3	B:X,Y,Z->U:x,y,z	Snake toxin-like	Interaction Interface Pymol
e3bt1U1	B:X,Y,Z->U:x,y,z	Snake toxin-like	Interaction Interface Pymol
e3bt1U1	B:X,Y,Z-1->U:x,y,z	Snake toxin-like	Interaction Interface Pymol
e3bt1U2	B:X-1/2,-Y-1/2,-Z->U:x,y,z	Snake toxin-like	Interaction Interface Pymol
e3bt1A1	B:-X+1/2,Y-1/2,-Z->A:x,y,z	Kringle-like	Interaction Interface Pymol