Domain ID e4klnF3

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  • A: a+b two layers
  • X: Cdc48 domain 2-like
  • H: Cdc48 domain 2-like
  • T: Cdc48 domain 2-like
  • F: CDC48_2
UID: 001111071
Type: Automatic domain
Parent: e1cr5A2
Range: F:107-200
PDB: 4kln
PDB Description: Transitional endoplasmic reticulum ATPase
UniProt: P55072
Hsap BLAST neighbor: P55072
Species: Homo sapiens

Structure of domain e4klnF3

Domains in the same chain:

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e4klnF1 F:12-106 cradle loop barrel RIFT-related double psi
e4klnF3 F:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnF9 F:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnF10 F:372-462 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e4klnA1 A:12-106 cradle loop barrel RIFT-related double psi
e4klnA3 A:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnA9 A:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnA10 A:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e4klnB1 B:12-106 cradle loop barrel RIFT-related double psi
e4klnB3 B:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnB9 B:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnB10 B:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e4klnC1 C:12-106 cradle loop barrel RIFT-related double psi
e4klnC3 C:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnC9 C:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnC10 C:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e4klnD1 D:12-106 cradle loop barrel RIFT-related double psi
e4klnD3 D:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnD9 D:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnD10 D:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e4klnE1 E:12-106 cradle loop barrel RIFT-related double psi
e4klnE3 E:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnE9 E:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnE10 E:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e4klnF1 F:12-106 cradle loop barrel RIFT-related double psi
e4klnF3 F:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e4klnF9 F:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4klnF10 F:372-462 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e4klnF3 of H-group "Cdc48 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4klnA9 F:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4klnC1 F:X,Y-1,Z-1->C:x,y,z RIFT-related Interaction Interface Pymol
e4klnC3 F:X,Y-1,Z-1->C:x,y,z Cdc48 domain 2-like Interaction Interface Pymol
e4klnD10 F:X,Y-1,Z->D:x,y,z Histone-related Interaction Interface Pymol