| UID: | 001147557 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1cr5A2 |
| Range: | A:107-196 |
| PDB: | 4kdl |
| PDB Description: | TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE |
| UniProt: | P55072 |
| Hsap BLAST neighbor: | P55072 |
| Species: | Homo sapiens |
Structure of domain e4kdlA2
Domains in the same chain:
| e4kdlA1 | A:23-106 | cradle loop barrel | RIFT-related | double psi |
| e4kdlA2 | A:107-196 | Cdc48 domain 2-like | Cdc48 domain 2-like | Cdc48 domain 2-like |
Domains in the same PDB:
| e4kdlA1 | A:23-106 | cradle loop barrel | RIFT-related | double psi |
| e4kdlA2 | A:107-196 | Cdc48 domain 2-like | Cdc48 domain 2-like | Cdc48 domain 2-like |
| e4kdlB1 | B:0-73 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Structural contacts of domain e4kdlA2 of H-group "Cdc48 domain 2-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4kdlB1 | A:X,Y,Z->B:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e4kdlB1 | A:X-1/2,-Y+1/2,-Z->B:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e4kdlA2 | A:x,y,z->A:-X+1,Y-1/2,-Z-1/2 | Cdc48 domain 2-like | Interaction Interface Pymol |
| e4kdlA1 | A:-X+1,Y-1/2,-Z-1/2->A:x,y,z | RIFT-related | Interaction Interface Pymol |
| e4kdlA2 | A:-X+1,Y-1/2,-Z-1/2->A:x,y,z | Cdc48 domain 2-like | Interaction Interface Pymol |
| e4kdlB1 | A:x,y,z->B:-X+1/2,-Y,Z-1/2 | Ubiquitin-related | Interaction Interface Pymol |
