ECOD: domain e4k87A7

Domain ID e4k87A7

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	001190958
Type:	Automatic domain
Parent:	e1kmmA2
Range:	A:292-419
PDB:	4k87
PDB Description:	Proline--tRNA ligase
UniProt:	P07814
Hsap BLAST neighbor:	P07814
Species:	Homo sapiens

Domains in the same chain:

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e4k87A6	A:16-291	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4k87A7	A:292-419	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4k87A3	A:420-512	IF3-like	C-terminal domain of ProRS	C-terminal domain of ProRS

Domains in the same PDB:

e4k87A6	A:16-291	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4k87A7	A:292-419	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4k87A3	A:420-512	IF3-like	C-terminal domain of ProRS	C-terminal domain of ProRS

Structural contacts of domain e4k87A7 of H-group "Anticodon-binding domain of Class II aaRS":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4k87A6	A:x,y,z->A:-X+2,-X+Y+1,-Z+1/3	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4k87A6	A:-X+2,-X+Y+1,-Z+1/3->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4k87A6	A:Y-1,X,-Z->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4k87A3	A:Y-1,X,-Z->A:x,y,z	C-terminal domain of ProRS	Interaction Interface Pymol