Domain ID e3fbyB4

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  • A: few secondary structure elements
  • X: TSP type-3 repeat
  • H: TSP type-3 repeat
  • T: TSP type-3 repeat
  • F: TSP_3
UID: 001208541
Type: Automatic domain
Parent: e1ux6A2
Range: B:268-527
Ligands: CA SO4
PDB: 3fby
PDB Description: CARTILAGE OLIGOMERIC MATRIX PROTEIN
UniProt: P49747
Hsap BLAST neighbor: P49747
Species: Homo sapiens

Structure of domain e3fbyB4

Structural contacts of domain e3fbyB4 of H-group "TSP type-3 repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3fbyB1 B:x,y,z->B:X-Y,-Y,-Z+1/3 Concanavalin A-like Interaction Interface Pymol
e3fbyB4 B:x,y,z->B:X-Y,-Y,-Z+1/3 TSP type-3 repeat Interaction Interface Pymol
e3fbyB4 B:X-Y,-Y,-Z+1/3->B:x,y,z TSP type-3 repeat Interaction Interface Pymol
e3fbyB1 B:X-Y,-Y,-Z+1/3->B:x,y,z Concanavalin A-like Interaction Interface Pymol
e3fbyB4 B:x,y,z->B:Y,X,-Z TSP type-3 repeat Interaction Interface Pymol
e3fbyB4 B:Y,X,-Z->B:x,y,z TSP type-3 repeat Interaction Interface Pymol
e3fbyC4 B:X,Y,Z->C:x,y,z EGF-related Interaction Interface Pymol