Domain ID e4fm9A7

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: Toprim domain
  • F: Toprim,TOPRIM_C
UID: 001262146
Type: Automatic domain
Parent: e1bjtA2
Range: A:433-575,A:616-716
Ligands: GOL MG
PDB: 4fm9
PDB Description: DNA topoisomerase 2-alpha
UniProt: P11388
Hsap BLAST neighbor: P11388
Species: Homo sapiens

Structure of domain e4fm9A7

Structural contacts of domain e4fm9A7 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fm9A6 A:x,y,z->A:-X+1,Y,-Z+1/2 alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e4fm9A4 A:x,y,z->A:-X+1,Y,-Z+1/2 HTH Interaction Interface Pymol
e4fm9A3 A:x,y,z->A:-X+1,Y,-Z+1/2 a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4fm9A3 A:-X+1,Y,-Z+1/2->A:x,y,z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4fm9A4 A:-X+1,Y,-Z+1/2->A:x,y,z HTH Interaction Interface Pymol
e4fm9A6 A:-X+1,Y,-Z+1/2->A:x,y,z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e4fm9A6 A:x,y,z->A:X-1/2,-Y+1/2,-Z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e4fm9A3 A:x,y,z->A:X-1/2,-Y+1/2,-Z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4fm9A7 A:x,y,z->A:-X,Y,-Z+1/2 HAD domain-related Interaction Interface Pymol
e4fm9A7 A:-X,Y,-Z+1/2->A:x,y,z HAD domain-related Interaction Interface Pymol