ECOD: domain e4c16B1

Domain ID e4c16B1

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: EGF/Laminin
F: EGF

UID:	001325372
Type:	Automatic domain
Parent:	e2ygqA3
Range:	B:119-157
Ligands:	NAG
PDB:	4c16
PDB Description:	E-SELECTIN
UniProt:	P16581
Hsap BLAST neighbor:	P16581
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4c16B1

Domains in the same chain:

Download Pymol

e4c16B2	B:1-118	C-type lectin-like	C-type lectin-like	C-type lectin-like
e4c16B1	B:119-157	EGF-like	EGF-related	EGF/Laminin
e4c16B4	B:157-223	EGF-like	EGF-related	Complement control module/SCR domain
e4c16B3	B:219-280	EGF-like	EGF-related	Complement control module/SCR domain

Domains in the same PDB:

e4c16A1	A:1-118	C-type lectin-like	C-type lectin-like	C-type lectin-like
e4c16A2	A:119-157	EGF-like	EGF-related	EGF/Laminin
e4c16A4	A:157-223	EGF-like	EGF-related	Complement control module/SCR domain
e4c16A3	A:219-280	EGF-like	EGF-related	Complement control module/SCR domain
e4c16B2	B:1-118	C-type lectin-like	C-type lectin-like	C-type lectin-like
e4c16B1	B:119-157	EGF-like	EGF-related	EGF/Laminin
e4c16B4	B:157-223	EGF-like	EGF-related	Complement control module/SCR domain
e4c16B3	B:219-280	EGF-like	EGF-related	Complement control module/SCR domain

Structural contacts of domain e4c16B1 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4c16A1	B:x,y,z->A:X-1,Y,Z	C-type lectin-like	Interaction Interface Pymol
e4c16A4	B:x,y,z->A:X,Y,Z	EGF-related	Interaction Interface Pymol