Domain ID e4edfB1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: UDPG/MGDP dehydrogenase C-terminal domain
  • F: UDPG_MGDP_dh_C
UID: 001504707
Type: Automatic domain
Parent: e1mv8A3
Range: B:319-465
Ligands: UPG
PDB: 4edf
PDB Description: UDP-glucose 6-dehydrogenase
UniProt: O60701
Hsap BLAST neighbor: O60701
Species: Homo sapiens

Structure of domain e4edfB1

Domains in the same chain:

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e4edfB14 B:1-88,B:111-211 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4edfB3 B:213-318 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e4edfB1 B:319-465 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Domains in the same PDB:

e4edfA1 A:1-88,A:111-211 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4edfA2 A:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e4edfA3 A:326-465 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e4edfB14 B:1-88,B:111-211 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4edfB3 B:213-318 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e4edfB1 B:319-465 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e4edfC14 C:2-88,C:111-211 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4edfC2 C:213-318 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e4edfC1 C:319-465 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e4edfD12 D:2-88,D:111-211 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4edfD3 D:213-318 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e4edfD1 D:319-465 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Structural contacts of domain e4edfB1 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4edfD1 B:X,Y,Z->D:x,y,z Rossmann-related Interaction Interface Pymol
e4edfD3 B:X,Y,Z->D:x,y,z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4edfA2 B:x,y,z->A:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4edfD12 B:X,Y,Z-1->D:x,y,z Rossmann-related Interaction Interface Pymol