Domain ID e3fvgA2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001520452
Type: Automatic domain
Parent: e1mqiA3
Range: A:415-520,A:748-790
Ligands: GOL MS8 SO4
PDB: 3fvg
PDB Description: Glutamate receptor, ionotropic kainate 1
UniProt: P39086
Hsap BLAST neighbor: P39086
Species: Homo sapiens

Structure of domain e3fvgA2

Structural contacts of domain e3fvgA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1mqiA3 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgB2 A:X,Y,Z-1->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgB2 A:X-1,Y+1,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgA2 A:x,y,z->A:X-1,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgA2 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgA2 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3fvgB2 A:x,y,z->B:X,Y-1,Z+1 Periplasmic binding protein-like II Interaction Interface Pymol