ECOD: domain e2pmsB1

Domain ID e2pmsB1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Transferrin

UID:	001522144
Type:	Automatic domain
Parent:	e1ryoA3
Range:	B:92-252
Ligands:	CO3 FE NAG SO4
PDB:	2pms
PDB Description:	Lactotransferrin
UniProt:	P02788
Hsap BLAST neighbor:	P02788
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2pmsB1

Domains in the same chain:

Download Pymol

e2pmsB2	B:3-91,B:253-333	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pmsB1	B:92-252	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e2pmsA2	A:3-91,A:253-333	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pmsA1	A:92-252	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pmsB2	B:3-91,B:253-333	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2pmsB1	B:92-252	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e2pmsB1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2pmsA2	B:X,Y,Z-1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2pmsA2	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol