Domain ID e1tl8A6

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: DNA breaking-rejoining enzymes
  • F: Topoisom_I,Topo_C_assoc
UID: 001762048
Type: Automatic domain
Parent: e1k4tA3
Range: A:585-644,A:717-765
Ligands: AI3
DrugDomain: DB07354
PDB: 1tl8
PDB Description: DNA TOPOISOMERASE I
UniProt: P11387
Hsap BLAST neighbor: P11387
Species: Homo sapiens

Structure of domain e1tl8A6

Domains in the same chain:

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e1tl8A1 A:213-229,A:320-430 Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1tl8A4 A:230-318 Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1tl8A2 A:431-583 HTH HTH DNA breaking-rejoining enzymes
e1tl8A6 A:585-644,A:717-765 HTH HTH DNA breaking-rejoining enzymes
e1tl8A5 A:641-712 Long alpha-hairpin Eukaryotic DNA topoisomerase I, dispensable insert domain Eukaryotic DNA topoisomerase I, dispensable insert domain

Domains in the same PDB:

e1tl8A1 A:213-229,A:320-430 Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1tl8A4 A:230-318 Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1tl8A2 A:431-583 HTH HTH DNA breaking-rejoining enzymes
e1tl8A6 A:585-644,A:717-765 HTH HTH DNA breaking-rejoining enzymes
e1tl8A5 A:641-712 Long alpha-hairpin Eukaryotic DNA topoisomerase I, dispensable insert domain Eukaryotic DNA topoisomerase I, dispensable insert domain

Structural contacts of domain e1tl8A6 of H-group "HTH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1tl8A4 A:-X+1,Y-1/2,-Z+1->A:x,y,z Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Interaction Interface Pymol
e1tl8A1 A:-X+1,Y-1/2,-Z+1->A:x,y,z Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Interaction Interface Pymol