ECOD: domain e3gis.5

Domain ID e3gis.5

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: FMN-binding split barrel
F: Trypsin,Thrombin_light

UID:	001771987
Type:	Automatic domain
Parent:	e3nxpA2
Range:	E:1R-15,F:16-234
Ligands:	SO4
PDB:	3gis
PDB Description:	Prothrombin
UniProt:	P00734
Hsap BLAST neighbor:	P00734
Species:

Domains in the same chain:

Download Pymol

e3gis.5	E:1R-15,F:16-234	cradle loop barrel	RIFT-related	FMN-binding split barrel

Domains in the same PDB:

e3gis.1	A:1R-15,B:16-234	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3gis.4	C:1S-15,D:16-234	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3gis.5	E:1R-15,F:16-234	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3gisX1	X:349-387	EGF-like	EGF-related	EGF/Laminin
e3gisX2	X:388-422	EGF-like	EGF-related	EGF/Laminin
e3gisX3	X:423-463	EGF-like	EGF-related	EGF/Laminin
e3gisY1	Y:348-387	EGF-like	EGF-related	EGF/Laminin
e3gisY5	Y:388-422	EGF-like	EGF-related	EGF/Laminin
e3gisY4	Y:423-463	EGF-like	EGF-related	EGF/Laminin
e3gisZ1	Z:350-387	EGF-like	EGF-related	EGF/Laminin
e3gisZ5	Z:388-422	EGF-like	EGF-related	EGF/Laminin
e3gisZ4	Z:423-463	EGF-like	EGF-related	EGF/Laminin

Structural contacts of domain e3gis.5 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gis.5	F:x,y,z->E:X,Y,Z	RIFT-related	Interaction Interface Pymol
e3gis.5	E:X,Y,Z->F:x,y,z	RIFT-related	Interaction Interface Pymol
e3gis.5	E:x,y,z->F:X-1/2,-Y-3/2,-Z	RIFT-related	Interaction Interface Pymol
e3gis.5	F:X-1/2,-Y-3/2,-Z->E:x,y,z	RIFT-related	Interaction Interface Pymol
e3gis.4	F:x,y,z->C:X,Y-1,Z	RIFT-related	Interaction Interface Pymol