Domain ID e3l4gM1

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  • A: a+b three layers
  • X: Class II aaRS and biotin synthetases
  • H: Class II aaRS and biotin synthetases
  • T: Class II aaRS and biotin synthetases
  • F: tRNA-synt_2d
UID: 001814040
Type: Automatic domain
Parent: e1jjcA1
Range: M:217-496
Ligands: PHE
PDB: 3l4g
PDB Description: PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN
UniProt: Q9Y285
Hsap BLAST neighbor: Q9Y285
Species: Homo sapiens

Structure of domain e3l4gM1

Domains in the same chain:

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e3l4gM2 M:176-217 HTH HTH winged
e3l4gM1 M:217-496 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases

Domains in the same PDB:

e3l4gA3 A:183-217 HTH HTH winged
e3l4gA1 A:218-500 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gB12 B:1-93 HTH HTH Putative DNA-binding domain
e3l4gB4 B:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gB2 B:309-383 HTH HTH Putative DNA-binding domain
e3l4gB10 B:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gC1 C:1-61,C:167-217 HTH HTH winged
e3l4gC2 C:62-74,C:134-166 HTH HTH tri-helical
e3l4gC3 C:75-133 HTH HTH winged
e3l4gC4 C:218-508 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gD16 D:1-93 HTH HTH Putative DNA-binding domain
e3l4gD15 D:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gD13 D:309-383 HTH HTH Putative DNA-binding domain
e3l4gD14 D:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gE1 E:217-498 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gF16 F:1-93 HTH HTH Putative DNA-binding domain
e3l4gF15 F:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gF13 F:309-383 HTH HTH Putative DNA-binding domain
e3l4gF14 F:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gG1 G:217-496 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gH16 H:1-93 HTH HTH Putative DNA-binding domain
e3l4gH15 H:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gH13 H:309-383 HTH HTH Putative DNA-binding domain
e3l4gH14 H:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gI2 I:187-217 HTH HTH winged
e3l4gI1 I:217-499 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gJ16 J:1-93 HTH HTH Putative DNA-binding domain
e3l4gJ15 J:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gJ13 J:309-383 HTH HTH Putative DNA-binding domain
e3l4gJ14 J:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gK2 K:1-13,K:34-46,K:176-217 HTH HTH winged
e3l4gK1 K:217-498 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gL16 L:1-93 HTH HTH Putative DNA-binding domain
e3l4gL15 L:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gL13 L:309-383 HTH HTH Putative DNA-binding domain
e3l4gL14 L:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gM2 M:176-217 HTH HTH winged
e3l4gM1 M:217-496 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gN16 N:1-93 HTH HTH Putative DNA-binding domain
e3l4gN15 N:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gN13 N:309-383 HTH HTH Putative DNA-binding domain
e3l4gN14 N:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gO1 O:217-496 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3l4gP16 P:1-93 HTH HTH Putative DNA-binding domain
e3l4gP15 P:94-308 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3l4gP13 P:309-383 HTH HTH Putative DNA-binding domain
e3l4gP14 P:384-589 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases

Structural contacts of domain e3l4gM1 of H-group "Class II aaRS and biotin synthetases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3l4gN16 M:X,Y,Z->N:x,y,z HTH Interaction Interface Pymol
e3l4gN14 M:X,Y,Z->N:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3l4gN15 M:X,Y,Z->N:x,y,z PheT/TilS domain Interaction Interface Pymol
e3l4gN13 M:X,Y,Z->N:x,y,z HTH Interaction Interface Pymol
e3l4gP14 M:X,Y,Z->P:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3l4gO1 M:X,Y,Z->O:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol