Q15465 SHH_HUMAN
Gene name: SHH
Protein name: Sonic hedgehog protein
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- anatomical structure formation involved in morphogenesis GO:0048646
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell adhesion GO:0007155
- cell death GO:0008219
- cell differentiation GO:0030154
- cell division GO:0051301
- cell morphogenesis GO:0000902
- cell population proliferation GO:0008283
- cell-cell signaling GO:0007267
- cellular nitrogen compound metabolic process GO:0034641
- cytoskeleton organization GO:0007010
- embryo development GO:0009790
- growth GO:0040007
- immune system process GO:0002376
- nucleocytoplasmic transport GO:0006913
- protein maturation GO:0051604
- protein transport GO:0015031
- reproduction GO:0000003
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
- vesicle-mediated transport GO:0016192
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q8N9U9 | SPANXA2-OT1 | 0.86055 | cell cycle GO:0007049 cell death GO:0008219 reproduction GO:0000003 |
| 2 | Q8WW01 | TSEN15 | 0.84516 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
| 3 | Q9BYN0 | SRXN1 | 0.83486 | response to stress GO:0006950 |
| 4 | Q9Y5Y6 | ST14 | 0.81509 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell death GO:0008219 ... |
| 5 | O96011 | PEX11B | 0.81335 | signal transduction GO:0007165 |
| 6 | P78358 | CTAG1A | 0.80963 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 7 | O14508 | SOCS2 | 0.80923 | anatomical structure development GO:0048856 cell death GO:0008219 cell differentiation GO:0030154 ... |
| 8 | Q8TDH9 | BLOC1S5 | 0.80728 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cytoskeleton-dependent intracellular transport GO:0030705 ... |
| 9 | Q96CM4 | NXNL1 | 0.80636 | homeostatic process GO:0042592 |
| 10 | P17342 | NPR3 | 0.80498 | anatomical structure development GO:0048856 cell population proliferation GO:0008283 circulatory system process GO:0003013 ... |
20 40 60 80 100 AA: MLLLARCLLLVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ STMI: SSSSSSSSSSSSSSSSSSSSSSS DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................DDD.D......................................... DO_IUPRED2A: .............................................................D..........D.......................D... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................ CONSENSUS: DDDDDDDDDDDDDDD................DDDDD......................................... CONSENSUS_MOBI: ............................................................................. RICH_[GR]: GpGRGfGkRR
120 140 160 180 200 AA: RCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFP STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ........................DDDDDD..DDDDD.DDDDDDDD...................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ...........................................................................................DDDDDD...
220 240 260 280 300 AA: GSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALG STMI: DO_DISOPRED3: .................................................................................DDDDDDDDDDDDDDD.... DO_IUPRED2A: .........D.DD....................................................................DDDDDDDDDDDDDDD.D.. DO_SPOTD: ..............................................................................DDDDDDDDDDDDDDDDDDDD.. CONSENSUS: .................................................................................DDDDDDDDDDDDDDDDD.. CONSENSUS_MOBI: ..............................................................................DDDDDDDDDDDDDDDDDDDDDD RICH_[G]: GepeassGsGppsGG RICH_[GS]: SSGSGppSGG RICH_MOBI_[G]: GepeassGsGppsGGalG RICH_MOBI_[GS]: SSGSGppSGG
320 340 360 380 400 AA: PRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGD STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ..D.............................................................................................DDDD DO_SPOTD: ..............................................................................................DDDDDD CONSENSUS: ................................................................................................DDDD CONSENSUS_MOBI: DD............................................................................................DDDDDD RICH_[G]: GGd RICH_fLPS_[G]: rGGd RICH_MOBI_[G]: GGd RICH_MOBI_[DG]: DrGGD RICH_fLPS_MOBI_[G]: tdrGGd
420 440 460 AA: SGGGDRGGGGGRVALTAPGAADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDD.................................DD DO_IUPRED2A: DDDDDDDDDDDDDDDDD............................................. DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDD................................DDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDD.................................DD CONSENSUS_MOBI: DDDDDDDDDDDDDD................................................ RICH_[AG]: GGGdrGGGGGrvAltApGAAdApGAG RICH_[A]: AltApgAAdApgA RICH_[G]: sGGGdrGGGGGrvaltapGaadapGaG RICH_fLPS_[A]: rvAltApgAAdApgA RICH_fLPS_[G]: sGGGdrGGGGGrvaltapG RICH_MOBI_[G]: sGGGdrGGGGG RICH_MOBI_[DG]: sGGGDrGGGG RICH_fLPS_MOBI_[G]: sGGGdrGGGGGrva