Citrus Sinensis ID: 000832


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260---
MEKRLRSSLQSSAEEFLISATKQNFKSSKQVLKTLINSITSSSNLVTSLPHSLCNSISNAIETLQNDSIPGHAKSPPTKRCRRYSRTAKSSSSIDNANENYAAERKQKVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFGTEIPKHNVSSVKRKKPKSAVKISGKWKYASGKKASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQNIGISRPSGSGSKKDDRTESTRSSSEASFILLAVFHLNSSLCNTSCTDELLGGDSGNPSKLSPGSKHDKSNMRQGRGHKVRELQKEASSSNDNGFVCTGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEISKVNSDEDNGRVSKQEEFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRIEKEIEEQSQEGERQKLLDAKVLLEPVWMHHVFETERFSVMEEDMDS
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHHccccccccccccHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEccHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHccHHccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
cccHcHHHccccHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHcccHcHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccEcEEccHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEccEccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcHHHEEEccccHEccccccccccccccHHcHccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccHEEEEEHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccc
mekrlrssLQSSAEEFLISATKQNFKSSKQVLKTLINSITsssnlvtslPHSLCNSISNAIETlqndsipghakspptkrcrrysrtakssssidnANENYAAERKQKVLEDLQIFSHVAYLctahprkvfsssdllpAVQLLHNNlilfesdsVLSFEIASLCESWwkndlggkeMLISQFLPFLVSRSltlkkkvdvhrvysfrdafalfdfddnsiEDLKLLLIRCVisplylktedGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGgfvnqrttpgVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLdlfpledpdatkeVKDTLFDKQFFLLEKlltddcpdvrVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPrlghlmqdnVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRllmpsyfplkVNIKEACSRCvtivkrspvagarfcefavsegaplESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLIskckglsedEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVkfgteipkhnvssvkrkkpksavkisgkwkyasgkkassfeEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCmycdymdvyPVLAYTALALELTLqnigisrpsgsgskkddrtestrsssEASFILLAVFHLNsslcntsctdellggdsgnpsklspgskhdksnmrqgrghKVRELQKeasssndngfvctgqkITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLClrdsseaspppaeAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGcifyqsraggvhftasdhfkvhfPWWLLILARTELdeiskvnsdedngrvskqeefpEFKKFMELIIPllkgkpcildAVGVVFLTGSvvglerkdFGLFLGLVHFVCVKLIgtdnrewngldamlvslpdiyPRIEKEIEEQSQEGERQKLLDakvllepvwmhhvfeterfSVMEEDMDS
mekrlrsslqssAEEFLISatkqnfkssKQVLKTLINSITSSSNLVTSLPHSLCNSISNAIEtlqndsipghakspptkrcrrysrtakssssidnanENYAAERKQKVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAAStgrarssvfeivstvspdnvVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFgteipkhnvssvkrkkpksavkisgkwkyasgkkassfEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQnigisrpsgsgskkddrtesTRSSSEASFILLAVFHLNSSLCNTSCTDELLGGdsgnpsklspgskhdksnmrqGRGHKVRELqkeasssndngfvctGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEIskvnsdedngrvskqeefpefKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRIEKEIEEQSQEGERQKLLDAKVLLEPVWMHHVfeterfsvmeedmds
MEKRLRSSLQSSAEEFLISATKQNFKSSKQVLKTLINSITSSSNLVTSLPHSLCNSISNAIETLQNDSIPGHAKSPPTKRCRRYSRTAKSSSSIDNANENYAAERKQKVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSfrdafalfdfddNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGaihassrafaasirrVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNAlhllldlfpledpdATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSAtitkiitkiFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVrlamadlllllrdIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFGTEIPKHNVSSVKRKKPKSAVKISGKWKYASGKKASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVlaytalaleltlQNIGISRPSGSGSKKddrtestrssseASFILLAVFHLNSSLCNTSCTDELLGGDSGNPSKLSPGSKHDKSNMRQGRGHKVRELQKEASSSNDNGFVCTGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEISKVNSDEDNGRVSKQEEFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRIekeieeqsqegerqKLLDAKVLLEPVWMHHVFETERFSVMEEDMDS
*******************************LKTLINSIT****LVTSLPHSLCNSI**************************************************KVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGL************AHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFGTEIP*******************GKWKYA******SFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQNIGI***********************SFILLAVFHLNSSLCNTSCTDEL*******************************************GFVCTGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLR***********AFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDE********************EFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRI***************LLDAKVLLEPVWMHHVFETERF*********
**********SSAE*FLISATKQNFKSSKQV*KT**N***S**********************LQNDSIP***************************************LEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKC***********EVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHV****************************************EEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQN*************************ASFILLAVFHLNSSLCNTSCTDELLG***********************************************QKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVIS*****************KETFISLKSSFSYAAKLINLCLR***********AFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIF**************HFKVHFPWWLLILARTE**************************KFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRI******************AKVLLEPVWMHHVFETERFSV*******
************AEEFLISATKQNFKSSKQVLKTLINSITSSSNLVTSLPHSLCNSISNAIETLQNDSIP************************DNANENYAAERKQKVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGL**********RSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFGTEIPKH*****************GKWKYASGKKASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQNIGISR*******************EASFILLAVFHLNSSLCNTSCTDELLGGDSGN**********************************DNGFVCTGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEISKVN**********QEEFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRIEKEI********RQKLLDAKVLLEPVWMHHVFETERFS********
***********************NFKSSKQVLKTLIN*ITSSSNLVTSLPHSLCNSISNAIETLQND***************************************QKVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFGTEIP**********************KY*****ASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQNIG********************SSEASFILLAVFHLNSSLCNTSCTDELLGG**************************************DNGFVCTGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEISK**************EFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRIEKEIEEQSQEGERQKLLDAKVLLEPVWMHHVFETERF*********
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MEKRLRSSLQSSAEEFLISATKQNFKSSKQVLKTLINSITSSSNLVTSLPHSLCNSISNAIETLQNDSIPGHAKSPPTKRCRRYSRTAKSSSSIDNANENYAAERKQKVLEDLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVKFGTEIPKHNVSSVKRKKPKSAVKISGKWKYASGKKASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALELTLQNIGISRPSGSGSKKDDRTESTRSSSEASFILLAVFHLNSSLCNTSCTDELLGGDSGNPSKLSPGSKHDKSNMRQGRGHKVRELQKEASSSNDNGFVCTGQKITSKKVNMLTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEISKVNSDEDNGRVSKQEEFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPRIEKEIEEQSQEGERQKLLDAKVLLEPVWMHHVFETERFSVMEEDMDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1263 2.2.26 [Sep-21-2011]
Q2TAW01156 Condensin-2 complex subun N/A no 0.339 0.371 0.340 2e-70
Q6DFV11138 Condensin-2 complex subun yes no 0.334 0.371 0.329 2e-64
Q86XI21143 Condensin-2 complex subun yes no 0.373 0.412 0.314 5e-62
>sp|Q2TAW0|CNDG2_XENLA Condensin-2 complex subunit G2 OS=Xenopus laevis GN=ncapg2 PE=1 SV=1 Back     alignment and function desciption
 Score =  268 bits (685), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/432 (34%), Positives = 238/432 (55%), Gaps = 3/432 (0%)

Query: 149 LFESDSVLSFEIASLCESWWKNDLGGKEMLISQFLPFLVSRSLTLKKKV-DVHRVYSFRD 207
           L +S+S ++  I  LCE+WW+  L GKE         L+++SL +K  V D+ R++    
Sbjct: 133 LPKSESHITLAIRHLCEAWWEKGLQGKEEFGKTAFLLLLAKSLEVKCVVADIGRLWHLHQ 192

Query: 208 AFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQI 267
               FDF+     ++K LL++C +S  ++K E+GR+FL+FLF      +K +   IK+Q+
Sbjct: 193 TLLSFDFNSEESHNVKDLLLQCFLSINHIKKEEGRRFLSFLFSWDVNFIKMIHGTIKNQL 252

Query: 268 SFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIH-ASSRAFAASIRRVLG 326
               KS++    D+ +RAWK       + +E   +Q  +   +H   +      +R VL 
Sbjct: 253 QCLPKSLMTHIADIYFRAWKKASGDVLQTIEQSCIQDFMHHGVHLPRNSPLHPKVREVLS 312

Query: 327 GFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDT 386
            F  Q+   GVE+ML+NL +P+++R L+A NS VR NA  L ++ FP+ DP+   E  D 
Sbjct: 313 YFHQQKLRQGVEEMLYNLYQPIIWRGLKARNSEVRSNAALLFVEAFPIRDPNLNHEDMDN 372

Query: 387 LFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLC 446
              KQF  L  LL D  P VR   V G C+I   +WE+IP A +T ++ KI  D + D+ 
Sbjct: 373 EIQKQFEELFNLLEDPQPLVRSTGVLGVCKITAKYWEMIPPAILTDLLRKILGDLAADVS 432

Query: 447 N-EVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTF 505
           + +VR +    +  LL N LSH +L+ +LP L   + DN   VR+A  D+LL ++ +R  
Sbjct: 433 SADVRCSVFKCLPILLDNKLSHPLLENMLPALKFCLHDNSEKVRVAFVDMLLKIKAVRAA 492

Query: 506 QFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGA 565
           +F K+  ++ +L+ L  D   V+++I  LL  S+FP+    +  C RCV +++ +P A  
Sbjct: 493 KFWKICPMEQILARLEVDSRPVSRRIVNLLFNSFFPVNQQEEVWCERCVALIQMNPAAAR 552

Query: 566 RFCEFAVSEGAP 577
           +F ++A    AP
Sbjct: 553 KFYQYAYEHTAP 564




Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
Xenopus laevis (taxid: 8355)
>sp|Q6DFV1|CNDG2_MOUSE Condensin-2 complex subunit G2 OS=Mus musculus GN=Ncapg2 PE=2 SV=2 Back     alignment and function description
>sp|Q86XI2|CNDG2_HUMAN Condensin-2 complex subunit G2 OS=Homo sapiens GN=NCAPG2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1263
2240713151219 predicted protein [Populus trichocarpa] 0.961 0.995 0.619 0.0
2555685871216 conserved hypothetical protein [Ricinus 0.958 0.995 0.619 0.0
3594806261295 PREDICTED: uncharacterized protein LOC10 0.986 0.962 0.579 0.0
1477805671268 hypothetical protein VITISV_017339 [Viti 0.982 0.978 0.590 0.0
3574826051327 Condensin-2 complex subunit G2 [Medicago 0.980 0.932 0.551 0.0
3564955081228 PREDICTED: uncharacterized protein LOC10 0.956 0.983 0.544 0.0
4494484661217 PREDICTED: uncharacterized protein LOC10 0.948 0.984 0.540 0.0
4495223631217 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.948 0.984 0.539 0.0
2978378031203 hypothetical protein ARALYDRAFT_475499 [ 0.939 0.985 0.523 0.0
1864930871203 condensin-2 complex subunit G2 [Arabidop 0.939 0.986 0.521 0.0
>gi|224071315|ref|XP_002303400.1| predicted protein [Populus trichocarpa] gi|222840832|gb|EEE78379.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1504 bits (3895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 783/1264 (61%), Positives = 965/1264 (76%), Gaps = 50/1264 (3%)

Query: 1    MEKRL--RSSLQ-SSAEEFLISATKQNFK--SSKQVLKTLINSITSSSNLVTSLPHSLCN 55
            MEKR    SSL  SS +EFL +AT+ N K  SSK+ LK+LI+SI SSS L +SL  SL  
Sbjct: 1    MEKRHCHPSSLHNSSPQEFLSAATELNLKVKSSKRTLKSLIHSIPSSSPLSSSLLPSLHT 60

Query: 56   SISNAIETLQNDSIPGHAKSPPTKRCRRYSRTAKSSSSIDNANENYAAERKQKVLEDLQI 115
             IS++I + +      H  SPP  + RR  R+ + +++ + A  N   + +Q  LE L +
Sbjct: 61   FISDSILSFR------HPTSPPPSKKRR--RSGRKNNTDEEATLNLHKQPQQHNLEKLHL 112

Query: 116  FSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKNDLGGK 175
             +HVA+LC +HP+KVFS  DLLP+VQLLH+NL+ FESDS L  EI++LCE +W+ +L G+
Sbjct: 113  LAHVAFLCVSHPKKVFSPRDLLPSVQLLHDNLVFFESDSSLLLEISNLCEVYWRENLQGR 172

Query: 176  EMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLY 235
            EMLISQ LPFLVSRSLTLKKKVDVHRVY+ R+AF LFDF+D SIEDLK+LLIR VI+P+Y
Sbjct: 173  EMLISQSLPFLVSRSLTLKKKVDVHRVYALREAFTLFDFEDESIEDLKMLLIRTVIAPIY 232

Query: 236  LKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFRE 295
            LKTEDGRKFL F+FGLS  ++K+ LAMIKSQI+F RKS+LEAYG VL+RAWKGV+   +E
Sbjct: 233  LKTEDGRKFLGFIFGLSMQLMKEALAMIKSQIAFGRKSILEAYGVVLFRAWKGVDGVLKE 292

Query: 296  DVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQA 355
            + E GFLQ LIEG+I+A+SR FAAS+RRVLGGFV+QR T GVEK+LF L EPV+FRSLQ 
Sbjct: 293  EFEGGFLQGLIEGSIYANSRVFAASVRRVLGGFVSQRITDGVEKLLFRLAEPVIFRSLQV 352

Query: 356  ANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCC 415
            ANSNVR NALHLLLD FPLEDPDA KEVKDTL DKQFFL+E+L+ DDCPDVRVVAVEGC 
Sbjct: 353  ANSNVRLNALHLLLDFFPLEDPDAMKEVKDTLLDKQFFLMERLIMDDCPDVRVVAVEGCF 412

Query: 416  RILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLP 475
            R+LHLFWE+IPS+TITK++TKIFDD SHD+CNEVRL+TVNG IYLLGNP SHE+LKVLLP
Sbjct: 413  RVLHLFWEIIPSSTITKLLTKIFDDMSHDICNEVRLSTVNGTIYLLGNPQSHEILKVLLP 472

Query: 476  RLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLL 535
            RLGHL+ D+ LS R A+ DLLLL+RDIR+FQFNKVVGLD+LLS LAND SQVAQKITRLL
Sbjct: 473  RLGHLILDSALSSRAAVMDLLLLIRDIRSFQFNKVVGLDVLLSTLANDHSQVAQKITRLL 532

Query: 536  MPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSH 595
            +PSYFP KV+I+EAC+RCVT++KRSP+AGARFCEFA+ EGA  +SL+ELV V I LVLS+
Sbjct: 533  IPSYFPSKVSIEEACNRCVTLIKRSPMAGARFCEFAMLEGASPKSLMELVRVLIGLVLSN 592

Query: 596  DKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSSVFEI 655
            +KL  DQIEGLL A + LC ++  E CYKNALKE F   KVK LFAAASTG A+ SV  I
Sbjct: 593  EKLLADQIEGLLIAAASLCNNLVSEPCYKNALKEFFTGGKVKCLFAAASTGHAQPSVLNI 652

Query: 656  VSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLL 715
             S VSPD+V GL+E+CM L++ C GL ++ E QA+VRSAH+LLLS   FDDM ++LT LL
Sbjct: 653  CSVVSPDDVAGLVEECMSLVTNCCGLPKNVEMQAKVRSAHRLLLSYSGFDDMFDSLTRLL 712

Query: 716  QKAVYRCHVKFGTEIPKHNVSSVKRKKPKSAVKISGKWKYASGKKASSFEEDYSIAVGIA 775
            QKA YRCHVKFG EIPK  VS  KRKK KS+VKIS K K+  GK +++FE DYSIAVGIA
Sbjct: 713  QKAAYRCHVKFGVEIPKQRVSPGKRKKCKSSVKISAKRKHVGGKNSTTFEYDYSIAVGIA 772

Query: 776  WQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYPVLAYTALALE 835
             Q+KDL+ S+DSR+A+LGSQ LE  FLALKVISEVSI HC+ C+YMD  PVLAY+ LAL 
Sbjct: 773  CQIKDLVVSKDSREAILGSQALESSFLALKVISEVSIEHCISCEYMDTSPVLAYSGLALH 832

Query: 836  LTLQNIGISRPSGSGSKKDDRTESTRSSSEASFILLAVFHLNSSLCNTSCTDELLGGDSG 895
            ++LQNI IS  + SGSK  + T+S+      S +  ++ HL       +C D+LLG  + 
Sbjct: 833  MSLQNISIS-TNDSGSKNSEGTDSS------SILEASLDHL------LNCIDKLLGEVN- 878

Query: 896  NPSKLSPGSKHDKSNMRQGRGHKVRELQKEASSSNDNGFVCTGQKITSKKVNMLTAVLKF 955
                                   + E Q +AS SND+G + T ++  S KV MLTAVLK 
Sbjct: 879  -----------------------IGETQADASISNDDGSLSTKERGMSNKVKMLTAVLKL 915

Query: 956  IVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSY 1015
            IVDS A+G LS I G C  FT+AY++++I AL  QS + L F  ++LK+ F+ LKSSFSY
Sbjct: 916  IVDSIAMGLLSRIHGRCLNFTSAYLKHIIFALEHQSSEKLQFKEDELKDFFLCLKSSFSY 975

Query: 1016 AAKLINLCLRDSSEASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLI 1075
            AAKL+NL LRD+SE SP   EAFDLVN++++LI S+ELH+ SG+AA LV  AK+WL DLI
Sbjct: 976  AAKLLNLILRDTSETSPLLPEAFDLVNDMLDLITSIELHLGSGFAAGLVAAAKSWLPDLI 1035

Query: 1076 LALGSGCIFYQSRAGGVHFTASDHFKVHFPWWLLILARTELDEISKVNSDEDNGRVSKQE 1135
            LALGS C+  +++    + TA D  K  +P W +ILA+TEL EI + N +E +   S+ E
Sbjct: 1036 LALGSPCMLNKTQVASAYITALDCIKSGYPSWPIILAKTELYEIREANPEEVDDITSEPE 1095

Query: 1136 EFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGT 1195
            EF  FKKFME+I+ LLKGK  ILDAVGV+ LTGSVVGLERKDFG+ LGL+HFVCVKL+G 
Sbjct: 1096 EFRAFKKFMEMIVSLLKGKFNILDAVGVILLTGSVVGLERKDFGVVLGLLHFVCVKLVGE 1155

Query: 1196 DNREWNGLDAMLVSLPDIYPRIEKEIEEQSQEGERQKLLDAKVLLEPVWMHHVFETERFS 1255
            ++REWN LD ML SLPDIYP+IE+ IEEQS E  RQKL  A++LL+ VW +H++ET RFS
Sbjct: 1156 EDREWNELDMMLASLPDIYPQIERGIEEQSDENARQKLCSARMLLDHVWFYHLYETGRFS 1215

Query: 1256 VMEE 1259
             M+E
Sbjct: 1216 AMKE 1219




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568587|ref|XP_002525267.1| conserved hypothetical protein [Ricinus communis] gi|223535425|gb|EEF37095.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|359480626|ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264215 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147780567|emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357482605|ref|XP_003611589.1| Condensin-2 complex subunit G2 [Medicago truncatula] gi|355512924|gb|AES94547.1| Condensin-2 complex subunit G2 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356495508|ref|XP_003516619.1| PREDICTED: uncharacterized protein LOC100808524 [Glycine max] Back     alignment and taxonomy information
>gi|449448466|ref|XP_004141987.1| PREDICTED: uncharacterized protein LOC101213278 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522363|ref|XP_004168196.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101225636 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297837803|ref|XP_002886783.1| hypothetical protein ARALYDRAFT_475499 [Arabidopsis lyrata subsp. lyrata] gi|297332624|gb|EFH63042.1| hypothetical protein ARALYDRAFT_475499 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|186493087|ref|NP_176676.3| condensin-2 complex subunit G2 [Arabidopsis thaliana] gi|332196188|gb|AEE34309.1| condensin-2 complex subunit G2 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1263
TAIR|locus:20109011203 HEB1 "hypersensitive to excess 0.645 0.677 0.540 1.5e-294
UNIPROTKB|F1NWM51147 LOC100859557 "Uncharacterized 0.387 0.427 0.268 2e-41
DICTYBASE|DDB_G0288819 1437 ncapG2 "non-SMC condensin II c 0.355 0.312 0.296 3.1e-41
MGI|MGI:19232941138 Ncapg2 "non-SMC condensin II c 0.361 0.401 0.281 5e-41
UNIPROTKB|F1N5351140 NCAPG2 "Uncharacterized protei 0.391 0.433 0.268 5.6e-41
ZFIN|ZDB-GENE-070410-1001140 ncapg2 "non-SMC condensin II c 0.358 0.397 0.306 5.6e-41
RGD|13084061137 Ncapg2 "non-SMC condensin II c 0.361 0.401 0.272 1.5e-40
UNIPROTKB|Q86XI21143 NCAPG2 "Condensin-2 complex su 0.391 0.432 0.272 1e-39
UNIPROTKB|E2RMM61138 NCAPG2 "Uncharacterized protei 0.387 0.429 0.269 1.3e-39
UNIPROTKB|I3L5I0954 I3L5I0 "Uncharacterized protei 0.281 0.373 0.275 1.7e-32
TAIR|locus:2010901 HEB1 "hypersensitive to excess boron 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2188 (775.3 bits), Expect = 1.5e-294, Sum P(2) = 1.5e-294
 Identities = 451/834 (54%), Positives = 571/834 (68%)

Query:     1 MEKRLRSSLQSSAEEFLISATKQNFKSSKQVLKTLINSITSSSNLVTSLPHSLCNSISNA 60
             MEKRLRSSL++S+EEFL SA K   KSSK  LKT+IN++  SS+L +SLP +L NSI + 
Sbjct:     1 MEKRLRSSLKTSSEEFLSSAVKLTLKSSKPSLKTIINAVKPSSDLSSSLPLALHNSILHH 60

Query:    61 IETLQ---------NDSIPGHAKSPPTKRCRRYSRTAKSSSSIDNANENYAAERKQKVLE 111
              E+ Q         N  IP  + SPPTKR R  + T+  S  +D        +RK ++L 
Sbjct:    61 TESFQKLLDEVNNNNTYIPSPSNSPPTKRHRGTTGTSPDSD-LD--------QRKHQILA 111

Query:   112 DLQIFSHVAYLCTAHPRKVFSSSDLLPAVQLLHNNLILFESDSVLSFEIASLCESWWKND 171
              LQI S+V +LC  +P+  F +SDLLPA Q LHNNL LFESDSVL  EIA +CE WWK  
Sbjct:   112 SLQILSYVLHLCLLNPKNAFPTSDLLPAAQALHNNLRLFESDSVLCLEIAGVCECWWKEG 171

Query:   172 LGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSXXXXXXXXXXXXNSIEDLKLLLIRCVI 231
             L G+E LISQ LPFL+SRSLTLKKKVDVHRVY              SIEDL++LL+RCV+
Sbjct:   172 LVGRESLISQSLPFLLSRSLTLKKKVDVHRVYMLREAFTLFDFEDESIEDLRMLLMRCVV 231

Query:   232 SPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEE 291
             SPLY+KTEDG++F++F FGLS+ ++K  LA++K+QI    KS+LE +G +L+RAWK VE 
Sbjct:   232 SPLYVKTEDGQRFVSFAFGLSRQLMKSGLAVVKAQIPLGSKSVLEGFGGILFRAWKEVEL 291

Query:   292 GFREDVESGFLQVLIEGXXXXXXXXXXXXXXXVLGGFVNQRTTPGVEKMLFNLTEPVMFR 351
               + ++E GFLQ +I+                VLGGF++QRT+ GVEK+LF L EP++FR
Sbjct:   292 DLKGEIEDGFLQGIIDSAIHASSSAFAASLRRVLGGFISQRTSQGVEKLLFTLAEPMIFR 351

Query:   352 SLQAANSNVRQNAXXXXXXXXXXXXXXATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAV 411
             SLQ ANSNVR NA              ATKE KDTL DKQF+LLEKLL+D+CPDVR VAV
Sbjct:   352 SLQVANSNVRLNALHLLLDLFPMEDPDATKEAKDTLLDKQFYLLEKLLSDECPDVRSVAV 411

Query:   412 EGCCRILHLFWELIPSAXXXXXXXXXFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLK 471
             EG  R+ +LFWE+IPSA         FDD SH+ C+EVRL+TVNGI YLL NP SH +LK
Sbjct:   412 EGLSRVFYLFWEVIPSATITKVLTKIFDDMSHESCSEVRLSTVNGITYLLANPQSHGILK 471

Query:   472 VLLPRLGHLMQDNVLSVXXXXXXXXXXXXXIRTFQFNKVVGLDILLSALANDQSQVAQKI 531
             V+LPRLGHLM D+V SV             +R FQFN VV LD+LLS LA+DQ+ VA+ I
Sbjct:   472 VILPRLGHLMLDSVTSVRVAMVDLLLLIRDVRAFQFNTVVSLDVLLSVLASDQTHVAKGI 531

Query:   532 TRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRL 591
              RLL+PSYFP +   +EAC RC T++ R+P AGARFCEF VS GA ++S++ LV  F+  
Sbjct:   532 ARLLIPSYFPSRKRAEEACQRCRTLINRNPKAGARFCEFLVSLGATVKSVLHLVGFFLNS 591

Query:   592 VLSHDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAASTGRARSS 651
             VLS DKL E+Q EGLL A  YLCKD+  +     +LKEL   +K+KSL A A T +A+SS
Sbjct:   592 VLSGDKLLENQTEGLLRAAYYLCKDLVADSGCMASLKELLPGEKLKSLLAFAPTAQAQSS 651

Query:   652 VFEIVSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEAL 711
             V +I++ VSPD V  +LE CM L+  C GL  D  RQ E+RS HKLLLSS AF D++   
Sbjct:   652 VIDIITMVSPDIVSEVLEDCMNLVVNCGGLPSDAGRQTELRSVHKLLLSSNAFCDLIGTF 711

Query:   712 TMLLQKAVYRCHVKFGTEIPKHNVSSVKRKKPKSAVKISGKWKYASGKKASSFEEDYSIA 771
             T ++QK  YRC + FG E+ + N+ S+KRKK KS+ K S +WK+ SGK A SFEEDY +A
Sbjct:   712 TSIMQKTAYRCQINFGYEVERKNLQSMKRKKSKSSGKSSVRWKHVSGKNAISFEEDYLVA 771

Query:   772 VGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVISEVSILHCMYCDYMDVYP 825
             VGIAWQ+KDLLT+ED+RK++L S  +E L L+LKV+S  SIL    C+YMDV P
Sbjct:   772 VGIAWQIKDLLTTEDARKSILESD-IEELLLSLKVVSHTSILQATCCEYMDVNP 824


GO:0005634 "nucleus" evidence=ISM
GO:0005739 "mitochondrion" evidence=IDA
UNIPROTKB|F1NWM5 LOC100859557 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288819 ncapG2 "non-SMC condensin II complex, subunit G2" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:1923294 Ncapg2 "non-SMC condensin II complex, subunit G2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1N535 NCAPG2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-100 ncapg2 "non-SMC condensin II complex, subunit G2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1308406 Ncapg2 "non-SMC condensin II complex, subunit G2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q86XI2 NCAPG2 "Condensin-2 complex subunit G2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RMM6 NCAPG2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3L5I0 I3L5I0 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1263
pfam12422152 pfam12422, Condensin2nSMC, Condensin II non struct 3e-57
>gnl|CDD|204914 pfam12422, Condensin2nSMC, Condensin II non structural maintenance of chromosomes subunit Back     alignment and domain information
 Score =  194 bits (495), Expect = 3e-57
 Identities = 73/152 (48%), Positives = 107/152 (70%)

Query: 226 LIRCVISPLYLKTEDGRKFLAFLFGLSKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRA 285
           L+RC + P ++KTE+G+KFL+FLF LS  ++K++  +IK+Q+    KS+LEAYG++L+RA
Sbjct: 1   LLRCFVPPAFIKTEEGKKFLSFLFSLSSILIKEIHTLIKNQLPKLSKSVLEAYGEILFRA 60

Query: 286 WKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQRTTPGVEKMLFNLT 345
           WK      +E++E   +Q L+EGAIHA +   A   R VL  F +++    V+K+L  L 
Sbjct: 61  WKNASGALKEEIEEVIIQDLMEGAIHAETPLLAKKFREVLSSFHSKKGRKEVDKLLLRLY 120

Query: 346 EPVMFRSLQAANSNVRQNALHLLLDLFPLEDP 377
           EP+++R+LQ AN+ VR NAL LLLD FPLEDP
Sbjct: 121 EPILWRALQVANAKVRLNALALLLDAFPLEDP 152


This domain family is found in eukaryotes, and is approximately 150 amino acids in length. This family is part of a non-SMC subunit of condensin II which is involved in maintenance of the structural integrity of chromosomes. Condensin II is made up of SMC (structural maintenance of chromosomes) and non-SMC subunits. The non-SMC subunits bind to the catalytic ends of the SMC subunit dimer. The condensin holocomplex is able to introduce superhelical tension into DNA in an ATP hydrolysis- dependent manner, resulting in the formation of positive supercoils in the presence of topoisomerase I and of positive knots in the presence of topoisomerase II. Length = 152

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1263
KOG19491005 consensus Uncharacterized conserved protein [Funct 100.0
PF12422152 Condensin2nSMC: Condensin II non structural mainte 100.0
KOG0211759 consensus Protein phosphatase 2A regulatory subuni 99.69
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 98.25
PRK09687280 putative lyase; Provisional 98.09
PRK13800897 putative oxidoreductase/HEAT repeat-containing pro 97.93
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 97.89
PRK09687280 putative lyase; Provisional 97.86
PTZ00429746 beta-adaptin; Provisional 97.77
KOG21711075 consensus Karyopherin (importin) beta 3 [Nuclear s 97.7
PRK13800897 putative oxidoreductase/HEAT repeat-containing pro 97.58
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 97.45
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 97.38
KOG2171 1075 consensus Karyopherin (importin) beta 3 [Nuclear s 97.17
KOG15251266 consensus Sister chromatid cohesion complex Cohesi 97.01
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 96.97
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 96.61
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 96.57
PTZ00429746 beta-adaptin; Provisional 96.53
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 96.47
KOG2025892 consensus Chromosome condensation complex Condensi 96.38
PF0298531 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re 96.37
KOG0211759 consensus Protein phosphatase 2A regulatory subuni 96.34
KOG2259823 consensus Uncharacterized conserved protein [Funct 96.01
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 95.99
COG5096757 Vesicle coat complex, various subunits [Intracellu 95.91
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 95.85
COG1413335 FOG: HEAT repeat [Energy production and conversion 95.77
KOG18241233 consensus TATA-binding protein-interacting protein 95.75
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 95.71
COG5218885 YCG1 Chromosome condensation complex Condensin, su 95.62
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 95.56
PF12719298 Cnd3: Nuclear condensing complex subunits, C-term 95.42
KOG1242569 consensus Protein containing adaptin N-terminal re 95.28
KOG12401431 consensus Protein kinase containing WD40 repeats [ 95.26
KOG1242569 consensus Protein containing adaptin N-terminal re 95.26
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 94.58
PF05004309 IFRD: Interferon-related developmental regulator ( 94.54
PF1351355 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O 94.45
KOG1060968 consensus Vesicle coat complex AP-3, beta subunit 94.25
KOG2025892 consensus Chromosome condensation complex Condensi 94.1
KOG0212675 consensus Uncharacterized conserved protein [Funct 93.91
KOG2259823 consensus Uncharacterized conserved protein [Funct 93.91
PF05918556 API5: Apoptosis inhibitory protein 5 (API5); Inter 93.79
KOG12401431 consensus Protein kinase containing WD40 repeats [ 93.5
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 93.33
KOG0212675 consensus Uncharacterized conserved protein [Funct 93.29
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 93.27
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 93.15
KOG18481610 consensus Uncharacterized conserved protein [Funct 93.09
KOG19491005 consensus Uncharacterized conserved protein [Funct 93.08
KOG1525 1266 consensus Sister chromatid cohesion complex Cohesi 92.96
PF12719298 Cnd3: Nuclear condensing complex subunits, C-term 92.93
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 92.86
KOG1077938 consensus Vesicle coat complex AP-2, alpha subunit 92.78
KOG2023885 consensus Nuclear transport receptor Karyopherin-b 92.62
PF0298531 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re 92.32
TIGR02270410 conserved hypothetical protein. Members are found 92.25
COG1413335 FOG: HEAT repeat [Energy production and conversion 91.9
COG5096757 Vesicle coat complex, various subunits [Intracellu 91.8
TIGR02270410 conserved hypothetical protein. Members are found 90.18
KOG1060968 consensus Vesicle coat complex AP-3, beta subunit 89.89
PF1351355 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O 89.76
PF01347618 Vitellogenin_N: Lipoprotein amino terminal region; 89.62
KOG1820815 consensus Microtubule-associated protein [Cytoskel 89.23
KOG09151702 consensus Uncharacterized conserved protein [Funct 89.1
KOG1077938 consensus Vesicle coat complex AP-2, alpha subunit 88.66
cd08050343 TAF6 TATA Binding Protein (TBP) Associated Factor 88.49
KOG12481176 consensus Uncharacterized conserved protein [Funct 88.3
smart00638574 LPD_N Lipoprotein N-terminal Domain. 87.02
KOG1061734 consensus Vesicle coat complex AP-1/AP-2/AP-4, bet 86.93
COG5369743 Uncharacterized conserved protein [Function unknow 85.16
KOG02131172 consensus Splicing factor 3b, subunit 1 [RNA proce 84.82
KOG04141251 consensus Chromosome condensation complex Condensi 84.44
KOG19671030 consensus DNA repair/transcription protein Mms19 [ 84.07
KOG10201692 consensus Sister chromatid cohesion protein SCC2/N 83.16
KOG04141251 consensus Chromosome condensation complex Condensi 83.13
KOG2032533 consensus Uncharacterized conserved protein [Funct 82.74
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 82.73
PF13251182 DUF4042: Domain of unknown function (DUF4042) 82.16
KOG1241859 consensus Karyopherin (importin) beta 1 [Nuclear s 82.08
KOG1059877 consensus Vesicle coat complex AP-3, delta subunit 82.05
PF14500262 MMS19_N: Dos2-interacting transcription regulator 81.11
PF1036392 DUF2435: Protein of unknown function (DUF2435) 80.91
KOG19431133 consensus Beta-tubulin folding cofactor D [Posttra 80.77
>KOG1949 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1e-177  Score=1513.46  Aligned_cols=979  Identities=23%  Similarity=0.298  Sum_probs=923.7

Q ss_pred             CccchhhhhhhHHHHHHHhhccCccchhHhhhhhcccccccCCCCCCHHHHHHHHHHHhhccccccCccchhHHHHHhcC
Q 000832          172 LGGKEMLISQFLPFLVSRSLTLKKKVDVHRVYSFRDAFALFDFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGL  251 (1263)
Q Consensus       172 l~~kE~Lv~qtLp~LL~rSl~~~k~~dI~RL~~lReal~llDf~deS~~slk~LLLrc~~sP~FlkseEGrrFLAflFgl  251 (1263)
                      .|++|-+.+|-.|+++|++|..+.+++++|.++.|.++.+|||+|++|++++++|+|||++|+|+++||||||+|++|+|
T Consensus         1 mpksnpvtpnkqPsedwneLltefrgkggRalqktfirkLwavqediIananp~llrCf~~p~yik~eeG~rf~s~~f~~   80 (1005)
T KOG1949|consen    1 MPKSNPVTPNKQPSEDWNELLTEFRGKGGRALQKTFIRKLWAVQEDIIANANPMLLRCFINPNYIKKEEGRRFLSCLFNW   80 (1005)
T ss_pred             CCCCCCCCCCCCchhhHHHHHHHHcccchHHHHHHHHHHHHhhhHHHHhccchHHHHHhhhhHhhcChhhhhHHHHHhhH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhhccCcHHHHHHHhHHHHhhhcccchhhHHHHHHhHHHHHHHHhhccCCHHHHHHHHHHHhhHhhc
Q 000832          252 SKPMLKDVLAMIKSQISFERKSMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASSRAFAASIRRVLGGFVNQ  331 (1263)
Q Consensus       252 ~~~Lik~ih~tIKnQLp~~~kS~le~YGEIyFrAWK~A~gd~~eeIE~~cIQdLm~~AIha~s~~lAaklR~VLs~FHsq  331 (1263)
                      +.++++.|++++|+|+|...||+|++||||||||||.|+++++|+||++|||++|++||||++.|+++++|+||++||+|
T Consensus        81 ~~~~~k~il~~~k~q~~~l~ks~~~~~geI~frAWkea~~dL~eeiE~d~iq~~~~haiha~rsp~~sk~r~Vl~~F~hq  160 (1005)
T KOG1949|consen   81 NINFIKMILGTIKNQLQGLQKSLMVYIGEIYFRAWKEASGDLLEEIENDCIQDFMFHAIHAPRSPVHSKVREVLSYFHHQ  160 (1005)
T ss_pred             HHHHHHHHHHHHHHHhhcccHHHHHHHhHHHHHHHHHhccchHHHHhhhHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             CC-CcchHHHHHHhhHHHHHHhhcCCchHHHHHHHHHhHhhcCCCCCccchHHHHHHHHHHHHHHhhhcCCCChHHHHHH
Q 000832          332 RT-TPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVA  410 (1263)
Q Consensus       332 K~-~kgVdemL~rLY~PILwRLLka~NftVR~SA~~LF~~AFPlvdpd~~rEe~d~EL~kQF~~L~~LL~DDtPMVRRAA  410 (1263)
                      |+ ++||++|++|+|.|||||+++++|+.||.||+.||.++||..|||.++|++|..|+|||++|++||.||+||||..|
T Consensus       161 kk~~qgVeeml~rL~~p~l~R~L~a~Ns~VrsnAa~lf~~~fP~~dpd~~~e~mD~i~~kQf~~l~~LL~d~~p~VRS~a  240 (1005)
T KOG1949|consen  161 KKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPIRDPDLHAEEMDSIIQKQFEELYSLLEDPYPMVRSTA  240 (1005)
T ss_pred             HHHhhhHHHHHHHHHhHHHHHhhccCchhhhhhHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence            85 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHhhCChhHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhCCCCchHHHHhHHHhhhhhcCCCchHHHH
Q 000832          411 VEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRL  490 (1263)
Q Consensus       411 A~gVcriLskfWEiIP~~~I~slL~~If~~LAkDsQDSVRlaVVeGLiaLLkn~~She~Lk~LLP~LksLI~DkSWRVRy  490 (1263)
                      ++|+|++.++||++||++++++++.+|++++|+|.+.+||++||+|+..|+.||.+|..++++||+++++++|+|+|||.
T Consensus       241 ~~gv~k~~s~fWe~iP~~i~~~ll~kI~d~~a~dt~s~VR~svf~gl~~~l~np~sh~~le~~Lpal~~~l~D~se~VRv  320 (1005)
T KOG1949|consen  241 ILGVCKITSKFWEMIPPTILIDLLKKITDELAFDTSSDVRCSVFKGLPMILDNPLSHPLLEQLLPALRYSLHDNSEKVRV  320 (1005)
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhhccchheehhHhcCcHHHHcCccchhHHHHHHHhcchhhhccchhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCceeeecChHHHHHHHhcCchHHHHHHHHHhcccCCCCCCChHHHhHHHHHHHhcChHHHHHHHHH
Q 000832          491 AMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCVTIVKRSPVAGARFCEF  570 (1263)
Q Consensus       491 AfADLLleLk~irgiKF~~VV~~D~LLaRLa~Ds~~V~k~IvkLLipSfFP~k~s~~E~~~RCi~Lik~nP~Aa~~Fy~~  570 (1263)
                      |+.|+|.+|++++.++||+||++||+|++|+.|+..|+++++.+++|||||++.++++||.||+||+++||.||++||+|
T Consensus       321 A~vd~ll~ik~vra~~f~~I~~~d~~l~~L~~d~~~v~rr~~~li~~s~lP~~k~ee~~c~Rc~tlv~~n~~A~~rf~~~  400 (1005)
T KOG1949|consen  321 AFVDMLLKIKAVRAAKFWKICPMDHILVRLETDSRPVSRRLVSLIFNSFLPVNKPEEVWCERCVTLVQMNHAAARRFYQY  400 (1005)
T ss_pred             HHHHHHHHHHhhhhhhhhccccHHHHHHHHhccccHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcC-CChHHHHHHHHHHHHhhcc----CCCCChhHHHHHHHHHHHHHhhhhhhHhHHHHHHhHhhhhhHHHHHHhhcc
Q 000832          571 AVSEG-APLESLVELVTVFIRLVLS----HDKLDEDQIEGLLAAVSYLCKDIAREQCYKNALKELFANDKVKSLFAAAST  645 (1263)
Q Consensus       571 a~~~~-a~~~~l~~Li~~ll~~~ls----~~k~~~e~~eg~~~a~a~L~~~L~~~~~~k~~l~~l~~g~~l~~ll~~a~t  645 (1263)
                      ++++| ++.+++.+||++|+||||+    .+++++||.||+.+|++||||.|+.++.||+.|.|...|.+.|.....+.+
T Consensus       401 l~~~~~~~~~~~~hlI~~fln~~~~~~~~~~p~lee~~eG~~ka~~yl~~~lV~d~~Cma~L~e~~~g~k~k~d~~f~~~  480 (1005)
T KOG1949|consen  401 LHEHTATNIAKLIHLIRHFLNACIQRAVREPPELEEEEEGREKATVYLKTLLVNDVACMAGLLEIIVGLKKKIDRSFENN  480 (1005)
T ss_pred             hcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhccH
Confidence            99999 6779999999999999998    788899999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhcccCCCchhHHHHHHHhhhhhcCCCChhhhhHHHHHHHhHHhhccCChhHHHHHHHHHHHHHHhhhhhc
Q 000832          646 GRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCHVK  725 (1263)
Q Consensus       646 ~~a~sa~~~I~s~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~q~~~~sa~~~~~s~~~~d~~~~~l~~~l~~~~~~~~~~  725 (1263)
                      ..|++.++++.-.+.|+-+++..++||     |.|+|.|+.+|-|++|.|+..++...++++...++.+.|+     +..
T Consensus       481 kea~~~~in~~~~v~p~~~S~V~~dd~-----cksipnDvla~~el~sv~p~~~~p~~~c~vi~t~~S~~~~-----~~d  550 (1005)
T KOG1949|consen  481 KEAKLYTINKFASVLPEYLSKVFKDDR-----CKSIPNDVLALFELMSVMPASAVPPFSCGVISTLRSREEG-----AVD  550 (1005)
T ss_pred             HHHHHHhhccccccCHHHHHHhchhhh-----hccCchHHHHHhhhhccChhhcCCchhhccccChhHHHHh-----hcc
Confidence            999999999999999999999999999     9999999999999999999999999999999999999998     788


Q ss_pred             cccCCCCCcCccccccCCCccccccccccccCCCCCCCchhhhhhHhhhhhhHHHhhcchhhhhhhhccchHHHHHHHhh
Q 000832          726 FGTEIPKHNVSSVKRKKPKSAVKISGKWKYASGKKASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALK  805 (1263)
Q Consensus       726 ~g~~~~~~~~~~~krkk~ks~~k~~~~~~~~~~~~~~~~~~~~~~~~g~awqv~~~l~~~~~r~a~l~s~~~e~~~~~lk  805 (1263)
                      ||++.-..+..|.++||+|+..+.+..|+|+.|+++.||+++  .|+|.+|||+|.++.+|.||.|+.+ ++|.++..++
T Consensus       551 ~gy~vl~~~l~s~~~kkkr~~le~~~~wl~~~~~~aks~lqs--~a~~~~~qikDeykt~d~~k~I~l~-~IE~lL~kee  627 (1005)
T KOG1949|consen  551 KGYCVLLDCLCSWGQKKKRHILELVDNWLPTEHAQAKSNLQS--TASKGRVQIKDEYKTRDVKKEIALV-YIEYLLTKEE  627 (1005)
T ss_pred             ccHHHHHHHHHhhhhhcccccccCchhhhhhhhHHHHHHHHh--hcccceeeecchhhhhhhHHHHHHH-HHHHHHHHHh
Confidence            999999999999999999999999999999999999999998  9999999999999999999999997 8999999999


Q ss_pred             hHhHhHhhhhcccccccchhhHHHHHHHHHHhhhccCCCCCCCCCCCCCCccccccCCchhhHHHHHHHhhhccCCCCcc
Q 000832          806 VISEVSILHCMYCDYMDVYPVLAYTALALELTLQNIGISRPSGSGSKKDDRTESTRSSSEASFILLAVFHLNSSLCNTSC  885 (1263)
Q Consensus       806 ~is~~~i~~c~~~~~~d~~p~lay~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~c  885 (1263)
                      +.+..   +-.+|+|+|+.|             +                           .|++++++|.      ..|
T Consensus       628 gqeHt---~~~~cllsil~p-------------r---------------------------fI~~~~~~~~------~~e  658 (1005)
T KOG1949|consen  628 GQEHT---KNRECLLSILAP-------------R---------------------------FIKKLNHLLK------ALE  658 (1005)
T ss_pred             hcccc---cccceeeeccCh-------------H---------------------------HHHHHHHHHh------hcc
Confidence            99887   888999999999             1                           4899999999      999


Q ss_pred             hhhhhC-CCCCCCC---CCCCCCcccccc--ccccCcchhhhhhhhcCCC-----CC------CCcccccccchhHHHHH
Q 000832          886 TDELLG-GDSGNPS---KLSPGSKHDKSN--MRQGRGHKVRELQKEASSS-----ND------NGFVCTGQKITSKKVNM  948 (1263)
Q Consensus       886 ~dkl~~-~~~g~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~  948 (1263)
                      +|++++ |+.|.++   .-+++-..---+  .+..+|        |-+++     .|      ...+++.. |+.|++||
T Consensus       659 t~~~~~~~~~~tpgllL~k~~~~S~~~ap~~fg~h~r--------D~~I~l~~kF~~~v~v~lsa~e~~tr-gv~~e~k~  729 (1005)
T KOG1949|consen  659 TSKADLESLLQTPGLLLGKPRGFSEAAAPRAFGLHCR--------DLSIHLQHKFCSEVKVYLSALEDTTR-GVWLESKI  729 (1005)
T ss_pred             chHhHhhhhhcCCCccccCCCCCccccCchhhccccc--------ceehHHHHHHHHHHHHHHHHhccccc-cchhHHHH
Confidence            999999 9988777   111111000000  111111        01111     01      11233334 99999999


Q ss_pred             HHHHHHHHHhcccccccccCccccccchhHHHHHHHHHhhhhcccccccccccchhhhhhhcchhhhHHHHHHHHhcCCC
Q 000832          949 LTAVLKFIVDSTALGFLSHIRGGCAKFTTAYVQYVISALGQQSRDNLLFNYNDLKETFISLKSSFSYAAKLINLCLRDSS 1028 (1263)
Q Consensus       949 ~t~~lkf~vd~~~~~~~~~~~~~~~~f~s~~~~~~~s~~~~~~~~~~~f~~~~~k~~~~~~kss~syaak~l~l~l~~~~ 1028 (1263)
                      +++|-+| ++++-|++.+..+....+|-|.|.+|++|.++.|  .+.+|+.-+++..++|.++||||+.++++|++|.++
T Consensus       730 l~~i~d~-~e~~e~~~a~~~Qa~i~~~~S~~~~~V~s~~ndh--t~fe~~~~~~~~gi~~t~~s~syv~~~~~Ll~r~~~  806 (1005)
T KOG1949|consen  730 LSFIQDQ-EEDYEKLHAVIYQAIIQTYLSVCKDVVMSGLNDH--TQFEMQLLQRSLGIMQTVKSFSYVSLLLDLLKRITG  806 (1005)
T ss_pred             HHhhhch-HHHHHHhHHHHHHHHHHHHHHHHHHHHhhhcCCC--CceeeechhhhhhhhhhhchhHHHHHHHHHHHHHhh
Confidence            9999999 7777899999999999999999999999999999  689999999999999999999999999999999999


Q ss_pred             CCCCCChhhhhhHHHHHHHHHHHhhhcchhhhhHHHHHHHHhHHHHHHHhccccccccccCCCccccccccccccchhHH
Q 000832         1029 EASPPPAEAFDLVNELINLICSVELHMDSGYAARLVVVAKAWLLDLILALGSGCIFYQSRAGGVHFTASDHFKVHFPWWL 1108 (1263)
Q Consensus      1029 e~s~~~~eaf~lan~lldl~~sve~~~gs~~a~~lv~~~k~wlp~lil~lg~~~~~~~~~~~~~~~~~~~~~~~~~p~w~ 1108 (1263)
                      +++.|..+-|+++|+|||+++.|+-.+|+.||.|.|++..+|+||                   +.....|.+.+||.|.
T Consensus       807 ~~~~~~~ds~d~~~~lld~~~~V~~sL~~~~ar~~vs~~~~w~~d-------------------~t~~~~H~~mlfs~v~  867 (1005)
T KOG1949|consen  807 SSLIQKTDSDDEVAMLLDTVQKVFQSLLECIARSFVSQPEEWLRD-------------------STKRMMHHFMLFSIVS  867 (1005)
T ss_pred             HHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccch-------------------hhhchhhhhhhhhhhh
Confidence            999999999999999999999999999999999999999999999                   3444588899999998


Q ss_pred             HHHhhhhhcccccCCCCCcCCccCCCCCchhHHHHHHHHHHHhcCCCcchhhhHHHhhhhhhhccccccchhhhhhHHHh
Q 000832         1109 LILARTELDEISKVNSDEDNGRVSKQEEFPEFKKFMELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFV 1188 (1263)
Q Consensus      1109 ~~~ak~el~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~llk~~~~ild~v~~~~l~~~~~~l~r~d~~~~~gl~~fv 1188 (1263)
                      ..         ++     +  |+.|.+.+...+++...+++|++++.+|+|++ .+|+-++.++++..||.-.+||+|-|
T Consensus       868 ~s---------~k-----~--Dvee~~~p~~l~dl~p~~f~li~~i~k~l~~~-~sll~~l~~cI~~ndi~~~~~l~~av  930 (1005)
T KOG1949|consen  868 AS---------SK-----S--DVEELTPPEHLSDLPPFSFCLIGIIIKSLNVV-RSLLDELKACIASNDIEGIVCLTAAV  930 (1005)
T ss_pred             cc---------cc-----c--cccccCChhhhhcCCCceeehhHHHHHHHHHH-HHHHHHHHHHHHhccchhHHHHHHhH
Confidence            65         22     2  35566667778899999999999999999999 99999999999999999999999999


Q ss_pred             HHhhcCCC-ccccccchhcccccCchhHHHHHHHHHhhchHHHHhHHhhHHhhhhHHhHhhhccCcccccccc
Q 000832         1189 CVKLIGTD-NREWNGLDAMLVSLPDIYPRIEKEIEEQSQEGERQKLLDAKVLLEPVWMHHVFETERFSVMEED 1260 (1263)
Q Consensus      1189 c~kl~g~~-~~~~~~l~~~~~sl~~~~~~i~~~~~~~~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~~~~~~~ 1260 (1263)
                      |++|+|+| ++.|.+|+.|+.-|+++||.++|+|.|..|+++|.-+|+|++++.|+|+||+||||+|++|+|+
T Consensus       931 ~~~Lv~~e~~~k~~~l~~~l~~l~R~~k~~~keI~e~~D~~er~l~e~A~~~l~~~~~~HilnsldvqlpDEn 1003 (1005)
T KOG1949|consen  931 HIILVINEGKHKSSKLREVLATLHRKLKTFMKEITEEEDSIERFLYESASRTLGELLNSHILNSLDVQLPDEN 1003 (1005)
T ss_pred             heeEeecchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhccccCCCcc
Confidence            99999999 9999999999999999999999999999999999999999999999999999999999999995



>PF12422 Condensin2nSMC: Condensin II non structural maintenance of chromosomes subunit; InterPro: IPR024741 Subunit G2 is a non-SMC subunit of condensin II, which is involved in maintenance of the structural integrity of chromosomes Back     alignment and domain information
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PRK09687 putative lyase; Provisional Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>PRK09687 putative lyase; Provisional Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] Back     alignment and domain information
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>KOG2259 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>COG1413 FOG: HEAT repeat [Energy production and conversion] Back     alignment and domain information
>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain Back     alignment and domain information
>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] Back     alignment and domain information
>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] Back     alignment and domain information
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B Back     alignment and domain information
>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0212 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2259 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms Back     alignment and domain information
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>KOG0212 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG1848 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1949 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] Back     alignment and domain information
>TIGR02270 conserved hypothetical protein Back     alignment and domain information
>COG1413 FOG: HEAT repeat [Energy production and conversion] Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR02270 conserved hypothetical protein Back     alignment and domain information
>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B Back     alignment and domain information
>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] Back     alignment and domain information
>KOG1820 consensus Microtubule-associated protein [Cytoskeleton] Back     alignment and domain information
>KOG0915 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd08050 TAF6 TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex Back     alignment and domain information
>KOG1248 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>smart00638 LPD_N Lipoprotein N-terminal Domain Back     alignment and domain information
>KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5369 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] Back     alignment and domain information
>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] Back     alignment and domain information
>KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG2032 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>PF13251 DUF4042: Domain of unknown function (DUF4042) Back     alignment and domain information
>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information
>PF10363 DUF2435: Protein of unknown function (DUF2435) Back     alignment and domain information
>KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1263
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 3e-07
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 5e-06
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 5e-04
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 71.4 bits (174), Expect = 2e-12
 Identities = 104/751 (13%), Positives = 214/751 (28%), Gaps = 252/751 (33%)

Query: 203 YSFRDAFALF------DFDDNSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLFGLSKPML 256
           Y ++D  ++F      +FD   ++D+     + ++S    K E                +
Sbjct: 16  YQYKDILSVFEDAFVDNFDCKDVQDM----PKSILS----KEE----------------I 51

Query: 257 KDVLAMIKSQISFERK--SMLEAYGDVLYRAWKGVEEGFREDVESGFLQVLIEGAIHASS 314
             ++   K  +S   +    L +  + + + +  VEE  R +    FL       I    
Sbjct: 52  DHIIMS-KDAVSGTLRLFWTLLSKQEEMVQKF--VEEVLRINY--KFLM----SPIKTEQ 102

Query: 315 RAFAASIRRVLGGFVNQR-----TTPGVEKMLFNLTEPVMFRSLQAANSNVRQN---ALH 366
           R  +   R     ++ QR           K   N++    +  L+ A   +R      + 
Sbjct: 103 RQPSMMTRM----YIEQRDRLYNDNQVFAKY--NVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 367 LLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIP 426
                       + K                +  D C   +V     C     +FW  + 
Sbjct: 157 --------GVLGSGKTW--------------VALDVCLSYKVQ----CKMDFKIFWLNLK 190

Query: 427 SATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVL 486
           +    + + ++       L  ++     +   +     L    ++     L  L++    
Sbjct: 191 NCNSPETVLEMLQK----LLYQIDPNWTSRSDHSSNIKLRIHSIQ---AELRRLLKSKPY 243

Query: 487 SVRLAMADLLLLLRDIRTFQ----FNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPL 542
                  + LL+L +++  +    FN  +   ILL              TR         
Sbjct: 244 ------ENCLLVLLNVQNAKAWNAFN--LSCKILL-------------TTR--------- 273

Query: 543 KVNIKEACSRCVTIVKRSPVAGARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQ 602
                    + VT                       + L    T  I L      L  D+
Sbjct: 274 --------FKQVT-----------------------DFLSAATTTHISLDHHSMTLTPDE 302

Query: 603 IEGLLAAVSYL---CKDIAREQCYKNALKELFANDKVKSLFAAA-STGRARSSVFEIVST 658
           ++ LL    YL    +D+ RE    N            S+ A +   G A    ++    
Sbjct: 303 VKSLLL--KYLDCRPQDLPREVLTTNPR--------RLSIIAESIRDGLATWDNWK---H 349

Query: 659 VSPDNVVGLLEQCMGLISKCKGLSEDEERQAEVRSAHKLLLSSCA-FDD----MLEALTM 713
           V+ D +  ++E  +        L   E R+         +    + F          L++
Sbjct: 350 VNCDKLTTIIESSL------NVLEPAEYRK---------MFDRLSVFPPSAHIPTILLSL 394

Query: 714 LLQKAVYRCHVKFGTEIPKHNVSSVKRKKPKSAVKI------------------------ 749
           +    +    +    ++  H  S V+++  +S + I                        
Sbjct: 395 IWFDVIKSDVMVVVNKL--HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452

Query: 750 -SGKWKYASGKKASSFEEDYSIAVGIAWQVKDLLTSEDSRKAMLGSQHLELLFLALKVIS 808
            +    + S      + + Y     I   +K++   E  R  +     L+  FL  K+  
Sbjct: 453 YNIPKTFDSDDLIPPYLDQY-FYSHIGHHLKNIEHPE--RMTLFRMVFLDFRFLEQKIRH 509

Query: 809 EVSILHC------------MYCDYM-DVYPVLAYTAL--ALELTLQNIGISRPSGSGSKK 853
           + +  +              Y  Y+ D  P   Y  L  A+   L  I            
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDP--KYERLVNAILDFLPKIE----------- 556

Query: 854 DDRTESTRSSSEASFILLAVFHLNSSLCNTS 884
               E+   S     + +A+   + ++   +
Sbjct: 557 ----ENLICSKYTDLLRIALMAEDEAIFEEA 583


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1263
d1b3ua_588 a.118.1.2 (A:) Constant regulatory domain of prote 2e-06
d1u6gc_ 1207 a.118.1.2 (C:) Cullin-associated NEDD8-dissociated 5e-04
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HEAT repeat
domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 49.4 bits (116), Expect = 2e-06
 Identities = 43/340 (12%), Positives = 90/340 (26%), Gaps = 22/340 (6%)

Query: 394 LLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLAT 453
           +L   L ++   +R+ +++    I          + +   +T    D       EV LA 
Sbjct: 14  VLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED-----EVLLAL 68

Query: 454 VNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMAD-LLLLLRDIRTFQFNKVVG 512
              +          E +  LLP L  L       VR    + L  +  +           
Sbjct: 69  AEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAH-- 126

Query: 513 LDILLSALANDQSQVAQKITRLLMPSYFP---------LKVNIKEACSRCVTIVKRSPVA 563
              L+  LA      ++     L    +P         L+   +  CS    +V+R   A
Sbjct: 127 FVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRR---A 183

Query: 564 GARFCEFAVSEGAPLESLVELVTVFIRLVLSHDKLDEDQIEGLLAAVSYLCKDIAREQCY 623
            A                 E++ +F  L                  ++ L      E   
Sbjct: 184 AASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALV 243

Query: 624 KNALKELFANDKVKSLFAAASTGRARSSVFEIVSTVSPDNVVGLLEQCMGLISKCKGLSE 683
              L++   +   +  +  A               ++  ++V   +  M         + 
Sbjct: 244 MPTLRQAAEDKSWRVRYMVADKFTELQKAVGP--EITKTDLVPAFQNLMKDCEAEVRAAA 301

Query: 684 DEERQAEVRSAHKLLLSSCAFDDMLEALTMLLQKAVYRCH 723
             + +    +       +     +L  +  L+  A     
Sbjct: 302 SHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVK 341


>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1263
d1b3ua_588 Constant regulatory domain of protein phosphatase 99.81
d1b3ua_588 Constant regulatory domain of protein phosphatase 99.5
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 98.9
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 98.54
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 98.39
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 98.35
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 98.32
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 98.27
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 98.05
d1oyza_276 Hypothetical protein YibA {Escherichia coli [TaxId 97.98
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 97.9
d1lrva_233 Leucine-rich repeat variant {Azotobacter vinelandi 97.9
d1lrva_233 Leucine-rich repeat variant {Azotobacter vinelandi 97.76
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 97.47
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 97.42
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 97.28
d1oyza_276 Hypothetical protein YibA {Escherichia coli [TaxId 97.12
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 96.92
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 96.39
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 96.22
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 96.2
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 96.15
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 96.03
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 96.0
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 95.03
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 94.44
d1lsha1336 Lipovitellin-phosvitin complex, superhelical domai 92.54
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 91.87
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 87.22
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 86.92
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 86.08
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 85.85
d1upka_330 Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} 85.8
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HEAT repeat
domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81  E-value=5.2e-17  Score=133.08  Aligned_cols=188  Identities=20%  Similarity=0.216  Sum_probs=152.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             87788864999987516986578987999758525899973113778999999999995330799737999999633587
Q 000832          338 EKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRI  417 (1263)
Q Consensus       338 demL~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrI  417 (1263)
                      .+.+.+.+.|++.++.+.+|+.+|.+|+.++..+++..++..     ..++...+   .+|++|+.|+||++|+.    .
T Consensus       120 ~~~~~~~l~p~i~~L~~~~~~~~r~~a~~ll~~~~~~~~~~~-----~~~l~~~~---~~l~~D~~~~VR~~a~~----~  187 (588)
T d1b3ua_         120 PSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAV-----KAELRQYF---RNLCSDDTPMVRRAAAS----K  187 (588)
T ss_dssp             HHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHHH-----HHHHHHHH---HHHHTCSCHHHHHHHHH----H
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH---HHHHCCCCHHHHHHHHH----H
T ss_conf             888999999999998646314799999999999999861899-----99999999---99851699899999999----9


Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             88977207835899999999987326787417899899899952899846789827886643237986489999999999
Q 000832          418 LHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLL  497 (1263)
Q Consensus       418 LskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLl  497 (1263)
                      ++.+.+.++.+.+...+.+++..+.+|..+.||.++++++..++...........++|.+..+++|++|+||.++++.|.
T Consensus       188 l~~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~  267 (588)
T d1b3ua_         188 LGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFT  267 (588)
T ss_dssp             HHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTHH
T ss_pred             HHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             99899871578779999999999744885246789998887763058889999999999997202356888899998578


Q ss_pred             HHHCCCCCCEEEECCHHHHHHHHHCC-CHHHHHHHHHHHCCC
Q ss_conf             86300297200102957999998107-549999999974002
Q 000832          498 LLRDIRTFQFNKVVGLDILLSALAND-QSQVAQKITRLLMPS  538 (1263)
Q Consensus       498 eLk~irgiKF~~VV~~D~LLaRLa~D-s~~Vak~IvkLLipS  538 (1263)
                      .+....+-+...- ..-.++..+-.| .+.|+....+.|..-
T Consensus       268 ~l~~~~~~~~~~~-~l~~~l~~ll~d~~~~vr~~a~~~l~~~  308 (588)
T d1b3ua_         268 ELQKAVGPEITKT-DLVPAFQNLMKDCEAEVRAAASHKVKEF  308 (588)
T ss_dssp             HHHHHHCHHHHHH-THHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             8887766534344-4168999987213357779999879999



>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure