Citrus Sinensis ID: 001049

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170---

MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTPKVEGHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKLLLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREMLKSVAAKVSSESAKDGERNFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSGGAGLHRGGDGLVREIEFRRPVVVSILSERRVHAPRGLKGGKDGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAGGGWGSL

ccccccccEEEEEEEccccccEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEccHHHHHHHHHccccccEEEEEcccHHHHHHHccccccccccccccccccccccEEEEccEEcccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccccEEccccEEHHHccccHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEcccEEEEEEEEEccEEEccccEEEEEEcccccEEEEEEccccEEccccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEcccccHHHHHHHHHHHHcccEEEEcccccHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEccccEEEEEEccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEEccccccccccccccccccccEEEEEEccEEEEEEEEccccccccEEEccEEEEEccEEEEEccccEEEEEccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccEEEEcccccccccccccEEEcccccccEEEEEEEEccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccEEEEcccccccccccccccccccccccccccHHHHHccccEEEEEcEEccccccccccccccEEEEEEEEEcccEEEEEcccEEcccccccccccccccccEEEEcccEEEEcccccEEEEccccEEEEEcccccccccc

ccccccccEEEEEEccccEEEEEEEccccccEEEEEEccccHHHcccHHHHHHHHHHHHcccccccccccccHHHHHHEHccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccccHHHHHcccHHHHHHHEEEEccEEEEcccccccccccEEEEcccccEEEEEcccHHHHHHHHHHHHHccccEEEEEEHHccccHHHHHHHHHHHHHccccEEEEcccccHHHEEccccccEHHHHHHcHHHHHHHHHHHHHHcccccccEEEEEEcccccccHHHcccccEEEEcccccEEEEEEEccccccccEEEEEcccccccccHcccccEEEEEEEEEcEEEEEcccccEEEEEcccccEEEEcccEEEEcccccccccccccEcccccEEEEcHHHHHHcccHHHccHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHEEEHHcccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHccEEEEEEEEEEEcccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEccccccccccccccccccccccEEEEEEcccEcccEEEHHccccccEccccEEEEEcccEEEEccccEEEEEccccEEEEEEccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEccHHccccEEEEEcccccEEEcccccccccccHHHHHHHHHHHHccccccccEEEEEcccccccccccEEEEEEccccccEEEEEEEcccccccccccccccccccccEHHccEEEEcHHHHccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEcccccEEEEEEEccccccccccccccEEEcccccccccHHHHHHcccEEEEEEEEEccccccccccccccEEEEEEEcccEEEEEEccccEccccccccccccccccEEEEEcccEEEEEccccEEEEccccEEEEEcccccccccc

MGSVKEEKLRFCIdrggtftdvyaeipgqleGQVLKLLsvdptnyddapVEGIRRILEeytgekiprtskiptdkiewIRMGTTVATNALLERKGERIALCVTRGFKDLLQIgnqarpqifdltvstpsnlyeeVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGfrhvslssaltpmvravprgltasVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFmqsdgglapesrfsghkavlsgpaggvvgysqtlfgletekpligfdmggtstdvsryagSYEQVLETQIAGAiiqapqldintvaagggsnlMFQLGafrvgpesvgahpgpvcyrkggdlavTDANLILgfvipdyfpsifgpnedqpldiNATREKFQKLASEINSyrksqdpsvkdmtveDIALGFVNVanetmcrpirqltemkghetrnhalacfggagpQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEaqepysavygpesvlevsrreGILSKQVKQKLQEqgfreesitTETYLNLRYEGTDTAIMVKKRIaedgsgcgyaVDFEKLFQQEYGfklqnrnilvcdvrvrgigvtnilkpqaieptsgtpkveghYKVFFngwhdaplyklenlgyghvmpgpaiimngnstvivepNCKAVITKYGNIKIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLdfscalfgpdgglvanaphvpvhlgaMSSTVRWQLKYWRHnlnegdvlvsnhpcaggshlpditvitpvfdngkLVFFVASrghhaeiggitpgsmppfsksIWEEGAAIKAFKLVEKGifqeegitkllldpssedsahkipgtrrLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREMLKSVAAKVSsesakdgeRNFAAVVGGNVLTSQRITDVVLTAFQAcacsqgcmnnltfgdstfgyyetigggsgagptwdgtsgvqchmtntrmtdpeifeqrypvflhkfglreksggaglhrggdglvreiEFRRPVVVSILSErrvhaprglkggkdgarganylitkdkrkvylggkntvqvqpgeilqiltpagggwgsl

MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRIleeytgekiprtskiptdkiewirMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENekenqeslvkgvsgelvrvvkpvneKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEInsyrksqdpsvkdmTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGILSKQVkqklqeqgfreesittetylnlryegtDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIgvtnilkpqaieptsgtpkVEGHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHaeiggitpgsmpPFSKSIWEEGAAIKAFKLVEKGIFQEEGItkllldpssedSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREMLKSVAAKVssesakdgernFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLreksggaglhrggdglvreieFRRPVVVsilserrvhaprglkggkdgarganYLITKDKRKVYLGGKntvqvqpgeilqiltpagggwgsl

MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNektlepllkgllekGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTPKVEGHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGnikieiesisstiniaeniADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKLLLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREMLksvaakvssesakDGERNFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSggaglhrggdgLVREIEFRRPVVVSILSERRVHAPRGLKGGKDGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAGGGWGSL

********LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLE********LVKGVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLA****FSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGP***********************************MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLE************************SITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTPKVEGHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKLLL*************************AQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREM******************NFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSGGAGLHRGGDGLVREIEFRRPVVVSILSERRVHAPRGLK***DGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAG******

******E***FCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIG**********************YKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEI****************VQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKLLLDPSSEDSAH*IPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREMLKSVAAKVSSESAKDGERNFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSGGAGLHRGGDGLVREIEFRRPVVVSILSERRVHAPRGLKGGKDGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAGGGWG**

MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEIN**********KDMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGILSK**********FREESITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTPKVEGHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKLLLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREML***************ERNFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSGGAGLHRGGDGLVREIEFRRPVVVSILSERRVHAPRGLKGGKDGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAGGGWGSL

******EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTN************TPKVEGHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKLLLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQLNAEEAVREMLKSVAAKVSSESAKDGERNFAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSGGAGLHRGGDGLVREIEFRRPVVVSILSERRVHAPRGLKGGKDGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAGGGWGSL

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1173	2.2.26 [Sep-21-2011]
Q9FIZ7		1266	5-oxoprolinase OS=Arabido	yes	no	0.836	0.774	0.843	0.0
P97608		1288	5-oxoprolinase OS=Rattus	yes	no	0.820	0.746	0.576	0.0
O14841		1288	5-oxoprolinase OS=Homo sa	yes	no	0.827	0.753	0.567	0.0
Q75WB5		1288	5-oxoprolinase OS=Bos tau	yes	no	0.815	0.742	0.572	0.0
Q8K010		1288	5-oxoprolinase OS=Mus mus	yes	no	0.820	0.747	0.568	0.0
Q54NW6		1265	5-oxoprolinase OS=Dictyos	yes	no	0.807	0.748	0.526	0.0
P28273		1286	5-oxoprolinase OS=Sacchar	yes	no	0.976	0.891	0.451	0.0
Q10094		1317	Uncharacterized protein C	yes	no	0.813	0.724	0.499	0.0
Q10093		1260	Uncharacterized protein C	no	no	0.810	0.754	0.474	0.0
Q01262		690	Hydantoin utilization pro	N/A	no	0.563	0.957	0.292	3e-69

>sp\|Q9FIZ7\|OPLA_ARATH 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1	Back alignment and function desciption

 Score = 1705 bits (4416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 828/982 (84%), Positives = 912/982 (92%), Gaps = 1/982 (0%)

Query: 1   MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60
           MG+V E KLRFCIDRGGTFTDVYAEIPG  +G VLKLLSVDP+NYDDAPVEGIRRILEEY
Sbjct: 1   MGTVIEGKLRFCIDRGGTFTDVYAEIPGHSDGHVLKLLSVDPSNYDDAPVEGIRRILEEY 60

Query: 61  TGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQI 120
           TG+KIPRTSKIPTDKI+WIRMGTTVATNALLERKGERIALCVT+GFKDLLQIGNQARP I
Sbjct: 61  TGKKIPRTSKIPTDKIQWIRMGTTVATNALLERKGERIALCVTKGFKDLLQIGNQARPDI 120

Query: 121 FDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNEKTLEPLL 180
           FDLTV+ PSNLYEEVIEVDERV L LE++ +++ SL+KGVSGE +RVVKP + + L+PLL
Sbjct: 121 FDLTVAKPSNLYEEVIEVDERVVLALEDDDDDEGSLIKGVSGEFLRVVKPFDGEGLKPLL 180

Query: 181 KGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTAS 240
           KGLL+KGISCLAVVLMHSYT+P+HEM VEKLAL +GFRHVSLSSALTPMVRAVPRGLTA+
Sbjct: 181 KGLLDKGISCLAVVLMHSYTYPKHEMDVEKLALEMGFRHVSLSSALTPMVRAVPRGLTAT 240

Query: 241 VDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVG 300
           VDAYLTPVIKEYLSGF+SKFD+ L KVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVG
Sbjct: 241 VDAYLTPVIKEYLSGFISKFDDDLGKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVG 300

Query: 301 YSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGG 360
           YSQTLFGLETEKPLIGFDMGGTSTDVSRY GSYEQV+ETQIAG IIQAPQLDINTVAAGG
Sbjct: 301 YSQTLFGLETEKPLIGFDMGGTSTDVSRYDGSYEQVIETQIAGTIIQAPQLDINTVAAGG 360

Query: 361 GSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQ 420
           GS L FQ GAFRVGP+SVGAHPGPVCYRKGG+LAVTDANL+LGFVIPDYFPSIFGPNEDQ
Sbjct: 361 GSKLKFQFGAFRVGPDSVGAHPGPVCYRKGGELAVTDANLVLGFVIPDYFPSIFGPNEDQ 420

Query: 421 PLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMK 480
           PLD+ ATRE F+KLA +IN YRKSQDPS KDM+VE+IA+GFV+VANETMCRPIRQLTEMK
Sbjct: 421 PLDVAATREAFEKLAGQINIYRKSQDPSAKDMSVEEIAMGFVSVANETMCRPIRQLTEMK 480

Query: 481 GHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYS 540
           GHET+NHALACFGGAGPQHACAIARSLGM+EVL+HR+CGILSAYGMGLADV+E+AQEPYS
Sbjct: 481 GHETKNHALACFGGAGPQHACAIARSLGMKEVLVHRYCGILSAYGMGLADVIEDAQEPYS 540

Query: 541 AVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIA 600
           AVYGPES+ EV RRE +L ++V++KLQEQGF + +I+TETYLNLRY+GTDTAIMVK +  
Sbjct: 541 AVYGPESLSEVFRRETVLLREVREKLQEQGFGDGNISTETYLNLRYDGTDTAIMVKGKKT 600

Query: 601 EDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTPKVE 660
            DGS   YA +F KLF+QEYGFKLQNRN+L+CDVRVRGIGVT+ILKP+A+E    TPKVE
Sbjct: 601 GDGSAFDYAAEFLKLFEQEYGFKLQNRNLLICDVRVRGIGVTSILKPRAVEAAPVTPKVE 660

Query: 661 GHYKVFFN-GWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIE 719
            HYKV+F  GWHD PL+KLENLG+GH + GPAIIMNGNSTVIVEP CKA+ITKYGNIKIE
Sbjct: 661 RHYKVYFEGGWHDTPLFKLENLGFGHEILGPAIIMNGNSTVIVEPQCKAIITKYGNIKIE 720

Query: 720 IESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGP 779
           +E  +S++ +AEN+ADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALF P
Sbjct: 721 VEPATSSVKLAENVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFSP 780

Query: 780 DGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPV 839
           DGGLVANAPHVPVHLGAMSSTVRWQLK+W  NLNEGDVLV+NHPCAGGSHLPDITVITPV
Sbjct: 781 DGGLVANAPHVPVHLGAMSSTVRWQLKHWGENLNEGDVLVTNHPCAGGSHLPDITVITPV 840

Query: 840 FDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKL 899
           FD GKLVFFVASRGHHAE+GGITPGSMPPFSK+IWEEGAAIKAFK+VEKG+FQEEGI KL
Sbjct: 841 FDKGKLVFFVASRGHHAEVGGITPGSMPPFSKAIWEEGAAIKAFKVVEKGVFQEEGIVKL 900

Query: 900 LLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQ 959
           L  PSS+++  KIPGTRR+QDNLSDL+AQ+AANQRGISLIKELIEQYGL TVQAYM YVQ
Sbjct: 901 LQFPSSDETTTKIPGTRRIQDNLSDLQAQIAANQRGISLIKELIEQYGLGTVQAYMKYVQ 960

Query: 960 LNAEEAVREMLKSVAAKVSSES 981
           LNAEEAVREMLKSVA +VSSE+
Sbjct: 961 LNAEEAVREMLKSVANRVSSET 982

Catalyzes the cleavage of 5-oxo-L-proline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. Acts in the glutathione degradation pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 2EC: .EC: 9

>sp\|P97608\|OPLA_RAT 5-oxoprolinase OS=Rattus norvegicus GN=Oplah PE=1 SV=2	Back alignment and function description

>sp\|O14841\|OPLA_HUMAN 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3	Back alignment and function description

>sp\|Q75WB5\|OPLA_BOVIN 5-oxoprolinase OS=Bos taurus GN=OPLAH PE=1 SV=1	Back alignment and function description

>sp\|Q8K010\|OPLA_MOUSE 5-oxoprolinase OS=Mus musculus GN=Oplah PE=2 SV=1	Back alignment and function description

>sp\|Q54NW6\|OPLA_DICDI 5-oxoprolinase OS=Dictyostelium discoideum GN=oplah PE=3 SV=2	Back alignment and function description

>sp\|P28273\|OPLA_YEAST 5-oxoprolinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OXP1 PE=1 SV=2	Back alignment and function description

>sp\|Q10094\|YAOF_SCHPO Uncharacterized protein C11D3.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.15 PE=3 SV=1	Back alignment and function description

>sp\|Q10093\|YAOE_SCHPO Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.14c PE=3 SV=1	Back alignment and function description

>sp\|Q01262\|HYUA_PSESN Hydantoin utilization protein A OS=Pseudomonas sp. (strain NS671) GN=hyuA PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1173
255573641		1267	5-oxoprolinase, putative [Ricinus commun	0.838	0.775	0.879	0.0
225440310		1269	PREDICTED: 5-oxoprolinase-like [Vitis vi	0.839	0.776	0.880	0.0
374095605		1268	putative 5-oxoprolinase [Camellia sinens	0.842	0.779	0.873	0.0
224079425		1269	predicted protein [Populus trichocarpa]	0.842	0.778	0.884	0.0
449530035		1265	PREDICTED: 5-oxoprolinase-like [Cucumis	0.836	0.775	0.838	0.0
449441520		1265	PREDICTED: 5-oxoprolinase-like [Cucumis	0.836	0.775	0.838	0.0
297805372		1265	predicted protein [Arabidopsis lyrata su	0.835	0.774	0.844	0.0
15240349		1266	5-oxoprolinase [Arabidopsis thaliana] gi	0.836	0.774	0.843	0.0
356524810		1265	PREDICTED: 5-oxoprolinase-like [Glycine	0.836	0.775	0.833	0.0
357476263		1266	hypothetical protein MTR_4g093870 [Medic	0.838	0.777	0.831	0.0

>gi\|255573641\|ref\|XP_002527743.1\| 5-oxoprolinase, putative [Ricinus communis] gi\|223532884\|gb\|EEF34656.1\| 5-oxoprolinase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1791 bits (4638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 868/987 (87%), Positives = 929/987 (94%), Gaps = 4/987 (0%)

Query: 1   MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60
           MGS+KEEKLRFCIDRGGTFTDVYAE+PG  +G+VLKLLSVDP+NYDDAPVEGIRRILEEY
Sbjct: 1   MGSIKEEKLRFCIDRGGTFTDVYAEVPGNPDGRVLKLLSVDPSNYDDAPVEGIRRILEEY 60

Query: 61  TGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQI 120
           TGEKIPR+SKIPTDKIEWIRMGTTVATNALLERKGERIA+CVT+GFKDLLQIGNQARP I
Sbjct: 61  TGEKIPRSSKIPTDKIEWIRMGTTVATNALLERKGERIAVCVTQGFKDLLQIGNQARPNI 120

Query: 121 FDLTVSTPSNLYEEVIEVDERVELVLENEKENQES---LVKGVSGELVRVVKPVNEKTLE 177
           FDLTVS PSNLYEEVIEVDERV+LVL+ E+ +Q S   +VKGVSGELVR+VKP++E+ L+
Sbjct: 121 FDLTVSKPSNLYEEVIEVDERVQLVLDKEEVDQNSSASVVKGVSGELVRIVKPLDEEALK 180

Query: 178 PLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGL 237
           PLLKGLLEKGISCLAVVL+HSYTFPQHE+AVE++A  LGFRHVSLSS L+PMVRAVPRGL
Sbjct: 181 PLLKGLLEKGISCLAVVLLHSYTFPQHELAVERVAASLGFRHVSLSSGLSPMVRAVPRGL 240

Query: 238 TASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGG 297
           TASVDAYLTPVIKEYLSGF+SKFDEGL KVNVLFMQSDGGLAPESRFSGHKAVLSGPAGG
Sbjct: 241 TASVDAYLTPVIKEYLSGFISKFDEGLGKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGG 300

Query: 298 VVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVA 357
           VVGYSQTLFGLET+KPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVA
Sbjct: 301 VVGYSQTLFGLETQKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVA 360

Query: 358 AGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPN 417
           AGGGS L FQ GAFRVGPESVGAHPGPVCYRKGG+LAVTDANLILGFVIPDYFPSIFGPN
Sbjct: 361 AGGGSKLKFQFGAFRVGPESVGAHPGPVCYRKGGELAVTDANLILGFVIPDYFPSIFGPN 420

Query: 418 EDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLT 477
           EDQPLDI ATRE+F+KLA +INSYRKSQDP  KDMT+EDIALGFVNVANETMCRPIRQLT
Sbjct: 421 EDQPLDIEATREEFKKLAMQINSYRKSQDPLAKDMTIEDIALGFVNVANETMCRPIRQLT 480

Query: 478 EMKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQE 537
           E+KGHETRNHALACFGGAGPQHACAIARSLGM+EVLIH+FCGILSAYGMGLADVVEEAQE
Sbjct: 481 ELKGHETRNHALACFGGAGPQHACAIARSLGMKEVLIHKFCGILSAYGMGLADVVEEAQE 540

Query: 538 PYSAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKK 597
           PYSAVYG ESVLE S RE +L KQVKQKLQ QGFREE+ITTETYLNLRYEGTDT+IMV++
Sbjct: 541 PYSAVYGHESVLEASSREDVLLKQVKQKLQGQGFREENITTETYLNLRYEGTDTSIMVRR 600

Query: 598 RIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTP 657
            + EDGS   YAV+F KLFQ+EYGFKLQNRNIL+CDVRVRGIGVTNILKPQ ++PTSG+P
Sbjct: 601 HVNEDGSRYDYAVEFVKLFQKEYGFKLQNRNILICDVRVRGIGVTNILKPQVLQPTSGSP 660

Query: 658 KVEGHYKVFF-NGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNI 716
           KVEG YKV+F NGW + PL+KLENLG G +MPGPAIIMNGNSTVIVEPNCKA +TKYGNI
Sbjct: 661 KVEGDYKVYFGNGWLNTPLFKLENLGPGDIMPGPAIIMNGNSTVIVEPNCKAFVTKYGNI 720

Query: 717 KIEIESISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCAL 776
           KIEIES  +T+ IAE +ADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCAL
Sbjct: 721 KIEIESNVNTVQIAEKVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCAL 780

Query: 777 FGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVI 836
           FGPDGGLVANAPHVPVHLGAMSSTVRWQL YW  NLNEGDVLV+NHPCAGGSHLPDITVI
Sbjct: 781 FGPDGGLVANAPHVPVHLGAMSSTVRWQLNYWGDNLNEGDVLVTNHPCAGGSHLPDITVI 840

Query: 837 TPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGI 896
           TPVFD GKLV FVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVE+G+FQEEGI
Sbjct: 841 TPVFDKGKLVVFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVERGVFQEEGI 900

Query: 897 TKLLLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMT 956
            KLL  PSS +SA+KIPGTRRLQDNLSDL AQVAANQRGISLIKELIEQYGL TVQAYMT
Sbjct: 901 IKLLKFPSSNESAYKIPGTRRLQDNLSDLHAQVAANQRGISLIKELIEQYGLDTVQAYMT 960

Query: 957 YVQLNAEEAVREMLKSVAAKVSSESAK 983
           YVQLNAEEAVREMLKSVA +VSSES++
Sbjct: 961 YVQLNAEEAVREMLKSVAVRVSSESSR 987

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225440310\|ref\|XP_002262987.1\| PREDICTED: 5-oxoprolinase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|374095605\|gb\|AEY85030.1\| putative 5-oxoprolinase [Camellia sinensis]	Back alignment and taxonomy information

>gi\|224079425\|ref\|XP_002305860.1\| predicted protein [Populus trichocarpa] gi\|222848824\|gb\|EEE86371.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449530035\|ref\|XP_004172002.1\| PREDICTED: 5-oxoprolinase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449441520\|ref\|XP_004138530.1\| PREDICTED: 5-oxoprolinase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297805372\|ref\|XP_002870570.1\| predicted protein [Arabidopsis lyrata subsp. lyrata] gi\|297316406\|gb\|EFH46829.1\| predicted protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|15240349|ref|NP_198599.1| 5-oxoprolinase [Arabidopsis thaliana] gi|75170926|sp|Q9FIZ7.1|OPLA_ARATH RecName: Full=5-oxoprolinase; AltName: Full=5-oxo-L-prolinase; Short=5-OPase; AltName: Full=Protein OXOPROLINASE 1; AltName: Full=Pyroglutamase gi|10177173|dbj|BAB10362.1| 5-oxoprolinase [Arabidopsis thaliana] gi|20856448|gb|AAM26666.1| AT5g37830/K22F20_70 [Arabidopsis thaliana] gi|28416451|gb|AAO42756.1| At5g37830/K22F20_70 [Arabidopsis thaliana] gi|332006854|gb|AED94237.1| 5-oxoprolinase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|356524810\|ref\|XP_003531021.1\| PREDICTED: 5-oxoprolinase-like [Glycine max]	Back alignment and taxonomy information

>gi\|357476263\|ref\|XP_003608417.1\| hypothetical protein MTR_4g093870 [Medicago truncatula] gi\|355509472\|gb\|AES90614.1\| hypothetical protein MTR_4g093870 [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1173
TAIR\|locus:2156030		1266	OXP1 "oxoprolinase 1" [Arabido	0.826	0.766	0.824	0.0
MGI\|MGI:1922725		1288	Oplah "5-oxoprolinase (ATP-hyd	0.818	0.745	0.570	0.0
RGD\|620956		1288	Oplah "5-oxoprolinase (ATP-hyd	0.818	0.745	0.569	0.0
UNIPROTKB\|O14841		1288	OPLAH "5-oxoprolinase" [Homo s	0.819	0.746	0.568	0.0
UNIPROTKB\|F1ME97		1288	OPLAH "5-oxoprolinase" [Bos ta	0.816	0.743	0.566	0.0
UNIPROTKB\|Q75WB5		1288	OPLAH "5-oxoprolinase" [Bos ta	0.816	0.743	0.562	0.0
FB\|FBgn0034733		1294	CG4752 [Drosophila melanogaste	0.810	0.734	0.548	0.0
DICTYBASE\|DDB_G0284953		1265	oplah "5-oxoprolinase (ATP-hyd	0.804	0.746	0.522	2.49999998385e-316
ASPGD\|ASPL0000010591		1274	AN3972 [Emericella nidulans (t	0.808	0.744	0.508	1.2e-305
POMBASE\|SPAC11D3.15		1317	SPAC11D3.15 "5-oxoprolinase (A	0.807	0.719	0.499	2.5e-294

TAIR\|locus:2156030 OXP1 "oxoprolinase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4183 (1477.5 bits), Expect = 0., Sum P(2) = 0.
 Identities = 801/971 (82%), Positives = 874/971 (90%)

Query:     1 MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60
             MG+V E KLRFCIDRGGTFTDVYAEIPG  +G VLKLLSVDP+NYDDAPVEGIRRILEEY
Sbjct:     1 MGTVIEGKLRFCIDRGGTFTDVYAEIPGHSDGHVLKLLSVDPSNYDDAPVEGIRRILEEY 60

Query:    61 TGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQI 120
             TG+KIPRTSKIPTDKI+WIRMGTTVATNALLERKGERIALCVT+GFKDLLQIGNQARP I
Sbjct:    61 TGKKIPRTSKIPTDKIQWIRMGTTVATNALLERKGERIALCVTKGFKDLLQIGNQARPDI 120

Query:   121 FDLTVSTPSNLYEEVIEVDERVELVLENEKENQESLVKGVSGELVRVVKPVNXXXXXXXX 180
             FDLTV+ PSNLYEEVIEVDERV L LE++ +++ SL+KGVSGE +RVVKP +        
Sbjct:   121 FDLTVAKPSNLYEEVIEVDERVVLALEDDDDDEGSLIKGVSGEFLRVVKPFDGEGLKPLL 180

Query:   181 XXXXXXGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTAS 240
                   GISCLAVVLMHSYT+P+HEM VEKLAL +GFRHVSLSSALTPMVRAVPRGLTA+
Sbjct:   181 KGLLDKGISCLAVVLMHSYTYPKHEMDVEKLALEMGFRHVSLSSALTPMVRAVPRGLTAT 240

Query:   241 VDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVG 300
             VDAYLTPVIKEYLSGF+SKFD+ L KVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVG
Sbjct:   241 VDAYLTPVIKEYLSGFISKFDDDLGKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVG 300

Query:   301 YSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGG 360
             YSQTLFGLETEKPLIGFDMGGTSTDVSRY GSYEQV+ETQIAG IIQAPQLDINTVAAGG
Sbjct:   301 YSQTLFGLETEKPLIGFDMGGTSTDVSRYDGSYEQVIETQIAGTIIQAPQLDINTVAAGG 360

Query:   361 GSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNEDQ 420
             GS L FQ GAFRVGP+SVGAHPGPVCYRKGG+LAVTDANL+LGFVIPDYFPSIFGPNEDQ
Sbjct:   361 GSKLKFQFGAFRVGPDSVGAHPGPVCYRKGGELAVTDANLVLGFVIPDYFPSIFGPNEDQ 420

Query:   421 PLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMK 480
             PLD+ ATRE F+KLA +IN YRKSQDPS KDM+VE+IA+GFV+VANETMCRPIRQLTEMK
Sbjct:   421 PLDVAATREAFEKLAGQINIYRKSQDPSAKDMSVEEIAMGFVSVANETMCRPIRQLTEMK 480

Query:   481 GHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYS 540
             GHET+NHALACFGGAGPQHACAIARSLGM+EVL+HR+CGILSAYGMGLADV+E+AQEPYS
Sbjct:   481 GHETKNHALACFGGAGPQHACAIARSLGMKEVLVHRYCGILSAYGMGLADVIEDAQEPYS 540

Query:   541 AVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIA 600
             AVYGPES+ EV RRE +L ++V++KLQEQGF + +I+TETYLNLRY+GTDTAIMVK +  
Sbjct:   541 AVYGPESLSEVFRRETVLLREVREKLQEQGFGDGNISTETYLNLRYDGTDTAIMVKGKKT 600

Query:   601 EDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSGTPKVE 660
              DGS   YA +F KLF+QEYGFKLQNRN+L+CDVRVRGIGVT+ILKP+A+E    TPKVE
Sbjct:   601 GDGSAFDYAAEFLKLFEQEYGFKLQNRNLLICDVRVRGIGVTSILKPRAVEAAPVTPKVE 660

Query:   661 GHYKVFFNG-WHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGXXXXX 719
              HYKV+F G WHD PL+KLENLG+GH + GPAIIMNGNSTVIVEP CKA+ITKYG     
Sbjct:   661 RHYKVYFEGGWHDTPLFKLENLGFGHEILGPAIIMNGNSTVIVEPQCKAIITKYGNIKIE 720

Query:   720 XXXXXXXXXXXXXXADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGP 779
                           ADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALF P
Sbjct:   721 VEPATSSVKLAENVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFSP 780

Query:   780 DGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPV 839
             DGGLVANAPHVPVHLGAMSSTVRWQLK+W  NLNEGDVLV+NHPCAGGSHLPDITVITPV
Sbjct:   781 DGGLVANAPHVPVHLGAMSSTVRWQLKHWGENLNEGDVLVTNHPCAGGSHLPDITVITPV 840

Query:   840 FDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQEEGITKL 899
             FD GKLVFFVASRGHHAE+GGITPGSMPPFSK+IWEEGAAIKAFK+VEKG+FQEEGI KL
Sbjct:   841 FDKGKLVFFVASRGHHAEVGGITPGSMPPFSKAIWEEGAAIKAFKVVEKGVFQEEGIVKL 900

Query:   900 LLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQAYMTYVQ 959
             L  PSS+++  KIPGTRR+QDNLSDL+AQ+AANQRGISLIKELIEQYGL TVQAYM YVQ
Sbjct:   901 LQFPSSDETTTKIPGTRRIQDNLSDLQAQIAANQRGISLIKELIEQYGLGTVQAYMKYVQ 960

Query:   960 LNAEEAVREML 970
             LNAEEAVREML
Sbjct:   961 LNAEEAVREML 971

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;NAS

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0006751 "glutathione catabolic process" evidence=IMP

GO:0017168 "5-oxoprolinase (ATP-hydrolyzing) activity" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

MGI\|MGI:1922725 Oplah "5-oxoprolinase (ATP-hydrolysing)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|620956 Oplah "5-oxoprolinase (ATP-hydrolysing)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|O14841 OPLAH "5-oxoprolinase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1ME97 OPLAH "5-oxoprolinase" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q75WB5 OPLAH "5-oxoprolinase" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

FB\|FBgn0034733 CG4752 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0284953 oplah "5-oxoprolinase (ATP-hydrolyzing)" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010591 AN3972 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

POMBASE\|SPAC11D3.15 SPAC11D3.15 "5-oxoprolinase (ATP-hydrolizing) (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O14841	OPLA_HUMAN	3, ., 5, ., 2, ., 9	0.5677	0.8277	0.7538	yes	no
Q8K010	OPLA_MOUSE	3, ., 5, ., 2, ., 9	0.5689	0.8209	0.7476	yes	no
P97608	OPLA_RAT	3, ., 5, ., 2, ., 9	0.5765	0.8201	0.7468	yes	no
Q75WB5	OPLA_BOVIN	3, ., 5, ., 2, ., 9	0.5721	0.8150	0.7422	yes	no
P28273	OPLA_YEAST	3, ., 5, ., 2, ., 9	0.4516	0.9769	0.8911	yes	no
Q54NW6	OPLA_DICDI	3, ., 5, ., 2, ., 9	0.5267	0.8073	0.7486	yes	no
Q9FIZ7	OPLA_ARATH	3, ., 5, ., 2, ., 9	0.8431	0.8363	0.7748	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.2.9	0.979
3rd Layer	3.5.2	0.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1173
PLN02666		1275	PLN02666, PLN02666, 5-oxoprolinase	0.0
COG0145		674	COG0145, HyuA, N-methylhydantoinase A/acetone carb	1e-174
PLN02666		1275	PLN02666, PLN02666, 5-oxoprolinase	1e-123
pfam01968		285	pfam01968, Hydantoinase_A, Hydantoinase/oxoprolina	7e-98
COG0146		563	COG0146, HyuB, N-methylhydantoinase B/acetone carb	7e-98
pfam02538		527	pfam02538, Hydantoinase_B, Hydantoinase B/oxoproli	4e-92
COG0146		563	COG0146, HyuB, N-methylhydantoinase B/acetone carb	5e-76
pfam02538		527	pfam02538, Hydantoinase_B, Hydantoinase B/oxoproli	2e-69
pfam05378		175	pfam05378, Hydant_A_N, Hydantoinase/oxoprolinase N	9e-60

>gnl\|CDD\|215358 PLN02666, PLN02666, 5-oxoprolinase	Back alignment and domain information

 Score = 1969 bits (5104), Expect = 0.0
 Identities = 798/996 (80%), Positives = 880/996 (88%), Gaps = 8/996 (0%)

Query: 1   MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60
           MGS    K RFCIDRGGTFTDVYAE+PG  + +VLKLLSVDP NYDDAP EGIRRILEE 
Sbjct: 2   MGSRGSRKFRFCIDRGGTFTDVYAEVPGGSDFRVLKLLSVDPANYDDAPREGIRRILEEV 61

Query: 61  TGEKIPRTSKIPTDKIEWIRMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQI 120
           TG+KIPR++KIPT++IEWIRMGTTVATNALLERKGERIALCVT+GFKDLLQIGNQARP I
Sbjct: 62  TGKKIPRSAKIPTERIEWIRMGTTVATNALLERKGERIALCVTKGFKDLLQIGNQARPNI 121

Query: 121 FDLTVSTPSNLYEEVIEVDERVELVLENEKENQE-SLVKGVSGELVRVVKPVNEKTLEPL 179
           FDLTVS PSNLYEEV+EVDERV L LE + ++   S+VKGV+GELV VVKP++E+ L PL
Sbjct: 122 FDLTVSKPSNLYEEVVEVDERVVLALEEDGDDAGGSVVKGVTGELVEVVKPLDEEALRPL 181

Query: 180 LKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLTA 239
           L+GLL+KGI  LAVVLMHSYT+P HE AV KLA  +GF+ VSLSSAL PMVRAVPRG TA
Sbjct: 182 LQGLLDKGIRSLAVVLMHSYTYPAHERAVGKLARSMGFKQVSLSSALVPMVRAVPRGHTA 241

Query: 240 SVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVV 299
           SVDAYLTPVIKEYLSGF+S FD+GL  VNVLFMQSDGGL PESRFSGHKA+LSGPAGGVV
Sbjct: 242 SVDAYLTPVIKEYLSGFLSGFDDGLGDVNVLFMQSDGGLTPESRFSGHKAILSGPAGGVV 301

Query: 300 GYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAG 359
           GY+QT FGLETEKP+IGFDMGGTSTDVSRY GSYEQVLETQ AG IIQAPQLDINTVAAG
Sbjct: 302 GYAQTTFGLETEKPVIGFDMGGTSTDVSRYDGSYEQVLETQTAGVIIQAPQLDINTVAAG 361

Query: 360 GGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPSIFGPNED 419
           GGS L FQ GAFRVGPESVGAHPGPVCYRKGG+LAVTDANL+LG VIPDYFPSIFGPNED
Sbjct: 362 GGSKLKFQFGAFRVGPESVGAHPGPVCYRKGGELAVTDANLVLGRVIPDYFPSIFGPNED 421

Query: 420 QPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEM 479
           +PLD+ ATR  F+ LA++INSYRKSQDPS KDM+VE++ALGFV VANE MCRPIRQLTEM
Sbjct: 422 EPLDLEATRAAFEALAAQINSYRKSQDPSAKDMSVEEVALGFVRVANEAMCRPIRQLTEM 481

Query: 480 KGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPY 539
           KG+ET NHALACFGGAGPQHACAIAR+LGM EV +HR+CGILSAYGMGLADVV EAQEPY
Sbjct: 482 KGYETANHALACFGGAGPQHACAIARALGMSEVFVHRYCGILSAYGMGLADVVAEAQEPY 541

Query: 540 SAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRI 599
           +AVYGPES+ E SRRE  L+++V+QKLQEQGFRE++ITTETYLNLRYEGTDTAIMV +  
Sbjct: 542 AAVYGPESLAEASRREDALAEKVRQKLQEQGFREDNITTETYLNLRYEGTDTAIMVAEPE 601

Query: 600 AEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRGIGVTNILKPQAIEPTSG-TPK 658
             DGS   YA  F KLF++EYGFKLQNR+IL+ DVRVRGIGVTNILKP  ++  SG  P+
Sbjct: 602 NGDGSDGDYAAAFVKLFRREYGFKLQNRDILIDDVRVRGIGVTNILKPLPLDAASGGLPE 661

Query: 659 VEGHYKVFF-NGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIK 717
            E   KV+F NGWHD P+YKLENLG GH +PGPAIIMNGNSTV+VEP CKA++TKYGNIK
Sbjct: 662 PERTTKVYFENGWHDTPVYKLENLGPGHEIPGPAIIMNGNSTVVVEPGCKAIVTKYGNIK 721

Query: 718 IEIE-----SISSTINIAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDF 772
           IE+E     S   T+  AE  ADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDF
Sbjct: 722 IEVENSAEQSAEETVKAAEKKADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDF 781

Query: 773 SCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPD 832
           SCALFGPDGGLVANAPHVPVHLGAMSSTVRWQL+YW  NLNEGDVLV+NHP AGGSHLPD
Sbjct: 782 SCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLEYWGENLNEGDVLVTNHPQAGGSHLPD 841

Query: 833 ITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAAIKAFKLVEKGIFQ 892
           ITVITPVF +GK+VFFVASRGHHA+IGGITPGSMPPFSK+IWEEGAAIKAFKLVE G+FQ
Sbjct: 842 ITVITPVFRDGKIVFFVASRGHHADIGGITPGSMPPFSKTIWEEGAAIKAFKLVEGGVFQ 901

Query: 893 EEGITKLLLDPSSEDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKTVQ 952
           EEGITKLL  P S+++A KIPGTRRLQDNLSDLRAQVAANQRGISLIKELI++YGL TVQ
Sbjct: 902 EEGITKLLQAPGSDETAPKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIDEYGLGTVQ 961

Query: 953 AYMTYVQLNAEEAVREMLKSVAAKVSSESAKDGERN 988
           AYM +VQ NAE AVREMLKSVAA+VSSES   G+ +
Sbjct: 962 AYMGHVQANAELAVREMLKSVAARVSSESPTFGDGS 997

Length = 1275

>gnl\|CDD\|223223 COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|215358 PLN02666, PLN02666, 5-oxoprolinase	Back alignment and domain information

>gnl\|CDD\|216816 pfam01968, Hydantoinase_A, Hydantoinase/oxoprolinase	Back alignment and domain information

>gnl\|CDD\|223224 COG0146, HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|217092 pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	Back alignment and domain information

>gnl\|CDD\|223224 COG0146, HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|217092 pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	Back alignment and domain information

>gnl\|CDD\|218571 pfam05378, Hydant_A_N, Hydantoinase/oxoprolinase N-terminal region	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1173
PLN02666		1275	5-oxoprolinase	100.0
KOG1939		1247	consensus Oxoprolinase [Amino acid transport and m	100.0
COG0145		674	HyuA N-methylhydantoinase A/acetone carboxylase, b	100.0
COG0146		563	HyuB N-methylhydantoinase B/acetone carboxylase, a	100.0
PF02538		527	Hydantoinase_B: Hydantoinase B/oxoprolinase; Inter	100.0
PF01968		290	Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr	100.0
PF05378		176	Hydant_A_N: Hydantoinase/oxoprolinase N-terminal r	100.0
TIGR03123		318	one_C_unchar_1 probable H4MPT-linked C1 transfer p	100.0
PF13941		457	MutL: MutL protein	97.74
TIGR01319		463	glmL_fam conserved hypothetical protein. This smal	97.48
COG1548		330	Predicted transcriptional regulator/sugar kinase [	96.92
TIGR02529		239	EutJ ethanolamine utilization protein EutJ family	96.22
PF01869		271	BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In	94.74
PRK15080		267	ethanolamine utilization protein EutJ; Provisional	94.29
PF06406		318	StbA: StbA protein; InterPro: IPR009440 This entry	93.56
COG2971		301	Predicted N-acetylglucosamine kinase [Carbohydrate	92.38
PRK00047		498	glpK glycerol kinase; Provisional	90.6
TIGR03286		404	methan_mark_15 putative methanogenesis marker prot	90.53
TIGR03192		293	benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s	90.49
TIGR03739		320	PRTRC_D PRTRC system protein D. A novel genetic sy	90.05
COG4820		277	EutJ Ethanolamine utilization protein, possible ch	89.88
TIGR02350		595	prok_dnaK chaperone protein DnaK. Members of this	89.35
TIGR00241		248	CoA_E_activ CoA-substrate-specific enzyme activase	88.95
PRK10939		520	autoinducer-2 (AI-2) kinase; Provisional	88.49
PRK13930		335	rod shape-determining protein MreB; Provisional	88.39
PRK13321		256	pantothenate kinase; Reviewed	88.06
PRK13318		258	pantothenate kinase; Reviewed	87.75
TIGR01311		493	glycerol_kin glycerol kinase. This model describes	87.49
TIGR02261		262	benz_CoA_red_D benzoyl-CoA reductase, bcr type, su	87.45
COG1924		396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	87.23
TIGR00241		248	CoA_E_activ CoA-substrate-specific enzyme activase	87.21
COG1940		314	NagC Transcriptional regulator/sugar kinase [Trans	87.15
smart00732		99	YqgFc Likely ribonuclease with RNase H fold. YqgF	86.66
PF00370		245	FGGY_N: FGGY family of carbohydrate kinases, N-ter	85.97
COG1924		396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	85.71
COG1070		502	XylB Sugar (pentulose and hexulose) kinases [Carbo	84.92
TIGR01314		505	gntK_FGGY gluconate kinase, FGGY type. Gluconate i	84.85
TIGR02259		432	benz_CoA_red_A benzoyl-CoA reductase, bcr type, su	84.3
TIGR01315		541	5C_CHO_kinase FGGY-family pentulose kinase. This m	83.43
PRK10331		470	L-fuculokinase; Provisional	83.37
PRK13317		277	pantothenate kinase; Provisional	83.14
TIGR02628		465	fuculo_kin_coli L-fuculokinase. Members of this fa	80.67
TIGR01234		536	L-ribulokinase L-ribulokinase. This enzyme catalyz	80.08

>PLN02666 5-oxoprolinase	Back alignment and domain information

Probab=100.00  E-value=6.8e-276  Score=2587.05  Aligned_cols=1170  Identities=81%  Similarity=1.264  Sum_probs=1070.4

Q ss_pred             CCCCCCCceEEEEeccCccccEEEEecC-CceEEEEEeccCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEE
Q 001049            1 MGSVKEEKLRFCIDRGGTFTDVYAEIPG-QLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWI   79 (1173)
Q Consensus         1 ~~~~~~~~~rigIDvGGTfTD~v~~~~~-g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i   79 (1173)
                      |+|-.+++||||||+||||||+|++|++ ++ +++.|+|||||+|+++++++||++++++++++.++...++++++|+.|
T Consensus         2 ~~~~~~~~~rigIDvGGTFTD~v~~~~~~~~-~~~~K~~sttp~d~~~gv~~Gi~~~l~~~~~~~~~~~~~~~~~~i~~v   80 (1275)
T PLN02666          2 MGSRGSRKFRFCIDRGGTFTDVYAEVPGGSD-FRVLKLLSVDPANYDDAPREGIRRILEEVTGKKIPRSAKIPTERIEWI   80 (1275)
T ss_pred             CCCCCCCCEEEEEECCcCCEeEEEEecCCCe-EEEEEeCCCCCCChhHHHHHHHHHHHHHHhcCCcccccCCChHHccEE
Confidence            7888889999999999999999999754 55 789999997799999999999999999887655555556777899999


Q ss_pred             EEehhHhhhHhhhcCCCcEEEEEccCchhhhhhccCCCCCCccccccCCCCcceeEEEeeEeeecccccc-cccccceee
Q 001049           80 RMGTTVATNALLERKGERIALCVTRGFKDLLQIGNQARPQIFDLTVSTPSNLYEEVIEVDERVELVLENE-KENQESLVK  158 (1173)
Q Consensus        80 ~hGTT~atNAllerkg~rvglitt~GfrD~l~igr~~rp~~~~~~~~~P~~l~~~~~~v~eRi~~~g~~~-~~~~~~~v~  158 (1173)
                      +||||++|||||||||+|||||||+||||+|+|||++||++|++++.+|.||+++++||+||++++|... ...+-+.++
T Consensus        81 ~hGTT~atNAllerkGa~v~litT~GfrD~l~igr~~r~~~~~~~~~~p~pl~~~~~ev~eR~~~~~~~~~~~~~G~~~~  160 (1275)
T PLN02666         81 RMGTTVATNALLERKGERIALCVTKGFKDLLQIGNQARPNIFDLTVSKPSNLYEEVVEVDERVVLALEEDGDDAGGSVVK  160 (1275)
T ss_pred             EEechHHHHHHHhccCCcEEEEecccchhheeccccCCCccccccccCCccchhhEEeeCceEecccccccccccCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999973000 000011222


Q ss_pred             cccCceeEEecCCCHHHHHHHHHHHHHCCCcEEEEEccCcCCCchhHHHHHHHHHhcCCceeeeeccccCcCCcccchhH
Q 001049          159 GVSGELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGLGFRHVSLSSALTPMVRAVPRGLT  238 (1173)
Q Consensus       159 G~~g~~g~v~~plde~~v~~~~~~l~~~gv~avAV~~l~S~~np~hE~rv~ei~~~~~~~~Vs~S~ei~p~~~e~eR~~T  238 (1173)
                      |..|.-.++++||||++|++++++|+++|+++|||||+|||+||+||+++++|++++...+|||||||+|++|||||++|
T Consensus       161 g~~G~~~~v~~plde~~v~~~~~~l~~~gv~avAV~~l~S~~NP~HE~~v~ei~~e~~~~~VslShei~~~~~e~eR~~T  240 (1275)
T PLN02666        161 GVTGELVEVVKPLDEEALRPLLQGLLDKGIRSLAVVLMHSYTYPAHERAVGKLARSMGFKQVSLSSALVPMVRAVPRGHT  240 (1275)
T ss_pred             ccCCcceeEecCCCHHHHHHHHHHHHHcCCCEEEEEeecCcCChHHHHHHHHHHHhcCCCcEEEcchhhhhccccchHHH
Confidence            22221117999999999999999999999999999999999999999999999998744589999999999999999999


Q ss_pred             HHHHhcchHHHHHHHHHHHHHHHhcCCCceEEEEEcCCCccccccccccceecccchhhHHHHHHhcccccCCCCEEEEe
Q 001049          239 ASVDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFD  318 (1173)
Q Consensus       239 tvlNAyl~p~~~~yl~~l~~~L~~~~~~~~l~im~s~GG~~s~~~~~pv~ti~SGPa~Gv~Ga~~l~~~~~g~~~~I~~D  318 (1173)
                      |+|||||+|+|++||++|+++|++.++++||+|||||||+|++++++|++|++||||||++|+++++++..+.+|+|+||
T Consensus       241 avlnAyl~p~~~~yl~~l~~~l~~~g~~~~l~im~sdGG~~~~~~a~~~~ti~SGPAagv~Gaa~l~~~~~g~~~~I~~D  320 (1275)
T PLN02666        241 ASVDAYLTPVIKEYLSGFLSGFDDGLGDVNVLFMQSDGGLTPESRFSGHKAILSGPAGGVVGYAQTTFGLETEKPVIGFD  320 (1275)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCCcCCHHHhcCCCeEEECHHHHHHHHHHHhccccCCCCEEEEe
Confidence            99999999999999999999999988889999999999999999999999999999999999999884356789999999


Q ss_pred             cCCCceEEeeeeceeeeeeeeEEccEEEeecceeeEEEeccCCcEEEEeCCeEEECccccCCCCCcceeccCCccccchH
Q 001049          319 MGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDA  398 (1173)
Q Consensus       319 mGGTStDv~li~G~~~~~~~~~i~g~~~~~p~~di~sIGaGGGSia~v~~G~l~VGP~SAGa~PGPacYg~GG~pTvTDA  398 (1173)
                      |||||||||+|+|.+..+.+.+|+|+|+++||+||+|||+|||||+|+++|.|+|||+|||++|||+||++||+||+|||
T Consensus       321 mGGTTtDv~li~g~~~~~~~~~i~g~~v~~p~~di~sIGaGGGSi~~vd~g~l~VGP~SaGa~PGPacy~~GG~pTvTDA  400 (1275)
T PLN02666        321 MGGTSTDVSRYDGSYEQVLETQTAGVIIQAPQLDINTVAAGGGSKLKFQFGAFRVGPESVGAHPGPVCYRKGGELAVTDA  400 (1275)
T ss_pred             cCCceeeeEEEcCceeEeeeeEECcEEEEecceeEEEEcCCCceEEEEcCCeEEECchhcccCccchhhhcCCcceeccH
Confidence            99999999999988777788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHccccCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhhccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001049          399 NLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTE  478 (1173)
Q Consensus       399 ~lvLG~l~p~~fl~~~g~gG~~~Ld~~~a~~a~~~ia~~lg~~~~~~~~~~~gl~~eeaA~gi~~ia~~~Ma~air~~~~  478 (1173)
                      ||+||||||++|+++++++|+++||+++|++||+++|++|+..-++.....+|++++++|++|++++|++|+++||.+++
T Consensus       401 ~l~LG~l~p~~f~~~~~~gg~~~ld~~~A~~a~~~la~~l~~~~~~~~~~~~g~~~e~aA~~i~~ia~~~m~~air~i~~  480 (1275)
T PLN02666        401 NLVLGRVIPDYFPSIFGPNEDEPLDLEATRAAFEALAAQINSYRKSQDPSAKDMSVEEVALGFVRVANEAMCRPIRQLTE  480 (1275)
T ss_pred             hhhhhhcCccccccccCccccccCCHHHHHHHHHHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998888899999999999999999999995322223334678999999999999999999999999999


Q ss_pred             HhCCCCCCceEEEEcCchhhhHHHHHHHcCCCEEEECCCCCccchhcccccceeEEEEEEEeeccCCCCHHHHHHHHHHH
Q 001049          479 MKGHETRNHALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADVVEEAQEPYSAVYGPESVLEVSRREGIL  558 (1173)
Q Consensus       479 ~rG~dprdf~LvafGGaGplha~~lA~~lGi~~VivP~~~~v~sA~G~~~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~l  558 (1173)
                      +||+|||||+|++||||||+|||.||++|||++|+||++++||||||+++||+++++++++...+++.+.+.+++.|++|
T Consensus       481 ~~G~dpr~~~l~afGGagp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~~ad~~~d~~~~~~~~~~~~~~~~l~~~~~~L  560 (1275)
T PLN02666        481 MKGYETANHALACFGGAGPQHACAIARALGMSEVFVHRYCGILSAYGMGLADVVAEAQEPYAAVYGPESLAEASRREDAL  560 (1275)
T ss_pred             HcCCCCCCceEEEecCcHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhhhhhhhhhhhhccccCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999888888999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEEEeeeecCeeEEEEEecccccCCCcccHHHHHHHHHHHHhccccCCCcEEEEEEEEEE
Q 001049          559 SKQVKQKLQEQGFREESITTETYLNLRYEGTDTAIMVKKRIAEDGSGCGYAVDFEKLFQQEYGFKLQNRNILVCDVRVRG  638 (1173)
Q Consensus       559 ~~~a~~~l~~~G~~~~~~~~~~~~d~RY~GQ~~~l~v~~~~~~~~~~~~~~~~F~~~h~~~yg~~~~~~~vei~~~rv~~  638 (1173)
                      +++|+++|.++|+.++++++++++||||.||.|+|+||+|.....+.+++.++||++|+++|||..++.+||+++|||++
T Consensus       561 ~~~a~~~l~~~g~~~~~~~~~~~~d~RY~GQ~~~l~v~~~~~~~~~~~~l~~~F~~~h~~~yg~~~~~~~veiv~lrv~~  640 (1275)
T PLN02666        561 AEKVRQKLQEQGFREDNITTETYLNLRYEGTDTAIMVAEPENGDGSDGDYAAAFVKLFRREYGFKLQNRDILIDDVRVRG  640 (1275)
T ss_pred             HHHHHHHHHHcCCCcccEEEEEEEEEEECCCCEEEEeecCcccccCHHHHHHHHHHHHHHHhCcCCCCCcEEEEEEEEEE
Confidence            99999999999999999999999999999999999999986433345689999999999999999999999999999999


Q ss_pred             EEecCCCCCCCCCCC-CCCCCccceEEEEe-CcEEEeeEEecCCCCCCCeeecceEEEeCCeEEEECCCcEEEEecCCcE
Q 001049          639 IGVTNILKPQAIEPT-SGTPKVEGHYKVFF-NGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNI  716 (1173)
Q Consensus       639 ~~~~~~~~~~~~~~~-~~~~~~~~~r~v~~-~~~~~~pVy~r~~L~~g~~i~GPAiIe~~~tT~vv~pg~~~~vd~~g~l  716 (1173)
                      +++.++|.+...... ..++++.++|++|| ++|+++|||+|++|++|++|+||||||+++||+||+|||++++|++|||
T Consensus       641 ~g~~~~~~~~~~~~~~~~~~~~~~~r~v~~~~~~~~~~vy~r~~L~~G~~i~GPAiie~~~sT~vv~pg~~~~vd~~g~l  720 (1275)
T PLN02666        641 IGVTNILKPLPLDAASGGLPEPERTTKVYFENGWHDTPVYKLENLGPGHEIPGPAIIMNGNSTVVVEPGCKAIVTKYGNI  720 (1275)
T ss_pred             EEecCCCCcCccccccCCCCCCcceEEEEECCcEEEeeEEEHHHCCCcCEeecCEEEecCCceEEECCCCEEEECCCCcE
Confidence            998876543322211 11234557899999 7899999999999999999999999999999999999999999999999


Q ss_pred             EEEEeccccccc-----cccccCChhhHHHHHHHHHHHHHHHHHHHHHhcccccccccccccceecCCCCCeecccCCCc
Q 001049          717 KIEIESISSTIN-----IAENIADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVP  791 (1173)
Q Consensus       717 ~i~~~~~~~~~~-----~~~~~~DPIt~eVi~~~L~siaeEM~~~l~RtA~Spii~e~~Dfs~aI~d~~G~lva~~~~ip  791 (1173)
                      +|++........     ....++|||++|||||||++|+|||+.+|+|||+||+|||++||||+|||++|++++|+.++|
T Consensus       721 ~i~~~~~~~~~~~~~~~l~~~~~DpitleIi~~~l~aiaeEM~~~l~RtA~Sp~i~E~~D~s~ai~d~~G~lva~~~~ip  800 (1275)
T PLN02666        721 KIEVENSAEQSAEETVKAAEKKADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPDGGLVANAPHVP  800 (1275)
T ss_pred             EEeecccccccccccccccccCCCcHhHHHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceEEECCCCCeeecCCCce
Confidence            998753222211     124568999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeccchHHHHHHHHHhcCCCCCCcEEEecCCCCCCCCCCCeEEEEeeeeCCeEEEEEeccccccccCCCCCCCCCCCCc
Q 001049          792 VHLGAMSSTVRWQLKYWRHNLNEGDVLVSNHPCAGGSHLPDITVITPVFDNGKLVFFVASRGHHAEIGGITPGSMPPFSK  871 (1173)
Q Consensus       792 ~h~gsm~~~v~~~l~~~~~~l~pGDv~i~NDPy~Gg~Hl~Dv~v~~PVF~~Gelv~~~a~~~H~~DiGG~~pGs~~~~at  871 (1173)
                      +|+|+|+.+|++++++|+++|+||||||+||||.||+|+||+++++|||++|||++|+++++||+||||++||||+++||
T Consensus       801 ~hlgsm~~~v~~~l~~~~~~l~pGDV~i~NDPy~GgtHl~Dv~~~~PVF~~G~lv~f~a~~~H~~DiGG~~PGs~~~~at  880 (1275)
T PLN02666        801 VHLGAMSSTVRWQLEYWGENLNEGDVLVTNHPQAGGSHLPDITVITPVFRDGKIVFFVASRGHHADIGGITPGSMPPFSK  880 (1275)
T ss_pred             EEeecCHHHHHHHHHhccCCCCCCCEEEEcCCcCCCCcCCceEEEeCeEECCEEEEEEEEeeeeeccCCCCCCCCCCCCC
Confidence            99999999999999999888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhccCcccccEEEEECCeeCHHHHHHHHcCCCC-CCCCCCCCCccCcccchhhHHHHHHHHHHHHHHHHHHHHHHCHHH
Q 001049          872 SIWEEGAAIKAFKLVEKGIFQEEGITKLLLDPSS-EDSAHKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLKT  950 (1173)
Q Consensus       872 di~qEGl~iPp~Kl~~~G~~~~d~~~~li~~~~~-~~~~p~~~n~R~p~~~~gDl~Aqiaa~~~g~~rl~eLi~ryG~d~  950 (1173)
                      |||||||+|||+||+++|++|+|.|+++|++ |+ ...+|+.+++|+|+++++||+||||||++|++||+|||+|||.|+
T Consensus       881 ~i~qEGLriPpvKL~~~G~~~~d~v~~li~~-N~~~~~~~~~p~~R~P~~~~gDl~AqiAA~~~g~~Rl~el~~~yG~~~  959 (1275)
T PLN02666        881 TIWEEGAAIKAFKLVEGGVFQEEGITKLLQA-PGSDETAPKIPGTRRLQDNLSDLRAQVAANQRGISLIKELIDEYGLGT  959 (1275)
T ss_pred             CHHHCccccccEEEEECCEECHHHHHHHHHh-CcccccccCCCCCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Confidence            9999999999999999999999757888887 43 113455556799999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc--------------c-ccCcc-------cc----------------cCCcC-----
Q 001049          951 VQAYMTYVQLNAEEAVREMLKSVA--------------A-KVSSE-------SA----------------KDGER-----  987 (1173)
Q Consensus       951 v~~~~~~i~~~sE~~~R~~I~~iP--------------d-~y~~~-------~~----------------~~Gs~-----  987 (1173)
                      |+++++++++|||++||++|++||              | .|+.+       |+                |+||+     
T Consensus       960 v~~~~~~~~~~se~~~R~~I~~lP~~~~~~~~~~~~~~dG~y~~~~~lDd~~pi~v~v~vt~~gd~i~vDftGT~pq~~g 1039 (1275)
T PLN02666        960 VQAYMGHVQANAELAVREMLKSVAARVSSESPTFGDGSSVTLEAEDYMDDGSPIHLTLTIDRRKGSAVFDFEGTSPEVYG 1039 (1275)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCceEEEEEEecCCcEEEEEEEEEECCCEEEEEeCCCchhcCC
Confidence            999999999999999999999998              6 35422       22                55654     


Q ss_pred             ------------------------------------------------CCccccccchhhhHHHHHHHHHHHHhhccCCC
Q 001049          988 ------------------------------------------------NFAAVVGGNVLTSQRITDVVLTAFQACACSQG 1019 (1173)
Q Consensus       988 ------------------------------------------------~paa~~~~~~~~~~~i~d~v~~Al~~~a~~~g 1019 (1173)
                                                                      +|+|++++++.++++++|++++||+++|++++
T Consensus      1040 ~iN~~~~~t~aa~~~~l~~~~~pdiP~N~G~~rpi~v~~P~Gtilnp~~PAav~~~~~~~~~~v~d~v~~Al~~~A~~~g 1119 (1275)
T PLN02666       1040 NWNAPPAVTAAAVIYCLRCLVDVDIPLNQGCLAPVTIRIPPGSFLSPSDKAAVVGGNVLTSQRVTDVVLTAFQACACSQG 1119 (1275)
T ss_pred             CcCcCHHHHHHHHHHHHHHHcCCCCCCCCeeeeeEEEEcCCCCeeCCCCCCceeccchhHHHHHHHHHHHHHHHHhhccC
Confidence                                                            78888888889999999999999999999999


Q ss_pred             CccceeecccceEEEEecccccCCCCCCCCCCCccCCCCCCCCCChhhhcccCcEEEEEEeeecCCCCCCcccCcCceEE
Q 001049         1020 CMNNLTFGDSTFGYYETIGGGSGAGPTWDGTSGVQCHMTNTRMTDPEIFEQRYPVFLHKFGLREKSGGAGLHRGGDGLVR 1099 (1173)
Q Consensus      1020 ~~~~~~~g~~~f~~~~~~~GG~GA~~~~DG~~~~~~~~~~~~~~~vE~~E~~~Pv~v~~~~l~~DSGGaG~~RGG~G~~~ 1099 (1173)
                      ++++++|+.++|.++++++||+||++++||+|+++++++|++|+|+|++|++||++|++|+|++||||+||||||+|+++
T Consensus      1120 ~~~~~~~~g~~~~~~e~~~GG~GA~~~~DG~~~~~~~~~~~~~~pvE~~E~~~Pl~v~~~~l~~dSGGaGk~RGG~G~~~ 1199 (1275)
T PLN02666       1120 CMNNLTFGDDTFGYYETIAGGAGAGPTWDGTSGVQCHMTNTRITDPEILERRYPVLLHRFGLREGSGGDGLHRGGDGVVR 1199 (1275)
T ss_pred             CcceEEEeCCcEEEEEecccccCCCCCCCCCCccccCCCCCCCCCHHHHhhhCCEEEEEEEeccCCCCCCccCCCCeEEE
Confidence            99999998889999999999999999999999988889999999999999999999999999999999999999999999


Q ss_pred             EEEEeeceEEEEecCCcccCCCCCCCCCCCcCCceEEEcCCCeEEeeCCcceEEcCCCCEEEEecCCCcccCC
Q 001049         1100 EIEFRRPVVVSILSERRVHAPRGLKGGKDGARGANYLITKDKRKVYLGGKNTVQVQPGEILQILTPAGGGWGS 1172 (1173)
Q Consensus      1100 ~~~~l~~~~~~~~~dr~~~~p~Gl~GG~~G~~~~~~~~~~~g~~~~~~~~~~~~l~~Gd~l~~~t~GGGG~Gd 1172 (1173)
                      +|+++.+..+++++||++++|||+.||.+|+++.+++++++++++.++++..+.|++||+|+++|||||||||
T Consensus      1200 ~~~~l~~~~~~~~~dr~~~~p~Gl~GG~~G~~~~~~i~~~~~~~~~l~~~~~~~l~~GD~l~~~t~GGGG~Gd 1272 (1275)
T PLN02666       1200 EIEFRRPVTVSILSERRVHAPRGLAGGGDGARGANLLIRKDGRRVNLGGKNTVHVEAGERLRILTPGGGGYGS 1272 (1275)
T ss_pred             EEEECCCeEEEEEeCCCEeCCccccCCcCCcCCeEEEEcCCCcEEecCCcceEEECCCCEEEEECCCcCccCC
Confidence            9999999889999999999999999999999999999888877777777778899999999999999999998

>KOG1939 consensus Oxoprolinase [Amino acid transport and metabolism]	Back alignment and domain information

>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>COG0146 HyuB N-methylhydantoinase B/acetone carboxylase, alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PF02538 Hydantoinase_B: Hydantoinase B/oxoprolinase; InterPro: IPR003692 An appreciable fraction of the sulphur present in mammals occurs in the form of glutathione	Back alignment and domain information

>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3	Back alignment and domain information

>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family	Back alignment and domain information

>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein	Back alignment and domain information

>PF13941 MutL: MutL protein	Back alignment and domain information

>TIGR01319 glmL_fam conserved hypothetical protein	Back alignment and domain information

>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein	Back alignment and domain information

>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis	Back alignment and domain information

>PRK15080 ethanolamine utilization protein EutJ; Provisional	Back alignment and domain information

>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []	Back alignment and domain information

>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK00047 glpK glycerol kinase; Provisional	Back alignment and domain information

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15	Back alignment and domain information

>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit	Back alignment and domain information

>TIGR03739 PRTRC_D PRTRC system protein D	Back alignment and domain information

>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR02350 prok_dnaK chaperone protein DnaK	Back alignment and domain information

>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative	Back alignment and domain information

>PRK10939 autoinducer-2 (AI-2) kinase; Provisional	Back alignment and domain information

>PRK13930 rod shape-determining protein MreB; Provisional	Back alignment and domain information

>PRK13321 pantothenate kinase; Reviewed	Back alignment and domain information

>PRK13318 pantothenate kinase; Reviewed	Back alignment and domain information

>TIGR01311 glycerol_kin glycerol kinase	Back alignment and domain information

>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D	Back alignment and domain information

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	Back alignment and domain information

>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative	Back alignment and domain information

>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	Back alignment and domain information

>smart00732 YqgFc Likely ribonuclease with RNase H fold	Back alignment and domain information

>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related	Back alignment and domain information

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	Back alignment and domain information

>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01314 gntK_FGGY gluconate kinase, FGGY type	Back alignment and domain information

>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A	Back alignment and domain information

>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase	Back alignment and domain information

>PRK10331 L-fuculokinase; Provisional	Back alignment and domain information

>PRK13317 pantothenate kinase; Provisional	Back alignment and domain information

>TIGR02628 fuculo_kin_coli L-fuculokinase	Back alignment and domain information

>TIGR01234 L-ribulokinase L-ribulokinase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1173
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 66.4 bits (161), Expect = 5e-11
 Identities = 86/577 (14%), Positives = 165/577 (28%), Gaps = 195/577 (33%)

Query: 436 SEIN-SYRK----SQDPSVKDMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALA 490
            E    Y+      +D  V +   +D+         + M + I    E+       H + 
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDV---------QDMPKSILSKEEID------HIIM 56

Query: 491 CFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGLADV-VEEAQEP-YSAVYGPESV 548
                                    R    L +    +    VEE     Y  +      
Sbjct: 57  ----------------SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM----- 95

Query: 549 LEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYE-GTDTAIMVKKRIAEDGSGCG 607
                            ++ +  R+ S+ T  Y+  R     D  +  K           
Sbjct: 96  ---------------SPIKTE-QRQPSMMTRMYIEQRDRLYNDNQVFAK----------- 128

Query: 608 YAVDFEKLFQQ--EYGFKLQ-NRNILVCDVRVRGIG----VTNILKPQAIEPTSGTPKVE 660
           Y V   + + +  +   +L+  +N+L+    V G G      ++     ++         
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDG--VLGSGKTWVALDVCLSYKVQCKMD----- 181

Query: 661 GHYKVFFNGWHDAPLYKLENLGYGHVMPGPAIIMNGNSTVIVEPNCKAVITKYGNIKIEI 720
             +K+F   W    L    NL   +  P   + M       ++PN  +      NIK+ I
Sbjct: 182 --FKIF---W----L----NLKNCNS-PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 721 ESISSTIN-------------IAENIADVVQLSIFNH--------RFMGIAEQMGRTLQR 759
            SI + +              +  N+ +    + FN         RF  + + +      
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL------ 281

Query: 760 TSISTNIKERLDFSCALFGPDG--GLVANA--------PHV-----PVHL---GAMSS-- 799
            S +T     LD       PD    L+           P       P  L          
Sbjct: 282 -SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340

Query: 800 TVRWQLKYWRH-NLNEGDVLVSNHPCAGGSHLPDITVITP-----VFDNGKLVFFVASRG 853
              W    W+H N ++   ++ +           + V+ P     +FD  +L  F  S  
Sbjct: 341 LATWD--NWKHVNCDKLTTIIES----------SLNVLEPAEYRKMFD--RLSVFPPS-- 384

Query: 854 HHAEIGGITPGSMPPFSKSI-WEEGAAIKAFKLVEKGIFQEEGITKLLLDPSSEDSAHKI 912
             A I        P    S+ W +        +V K           L++   ++S   I
Sbjct: 385 --AHI--------PTILLSLIWFDVIKSDVMVVVNK--LH----KYSLVEKQPKESTISI 428

Query: 913 PGTRRLQDNLSDLRAQVAANQRGISLIKELIEQYGLK 949
           P    +     +L+ ++       +L + +++ Y + 
Sbjct: 429 PS---IYL---ELKVKLENEY---ALHRSIVDHYNIP 456

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1173
3cet_A		334	Conserved archaeal protein; Q6M145, MRR63, NESG, X	99.81
4ehu_A		276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	95.21
3h1q_A		272	Ethanolamine utilization protein EUTJ; ethanolamin	95.09
2zf5_O		497	Glycerol kinase; hyperthermophilic archaeon, ATP-b	94.77
1zbs_A		291	Hypothetical protein PG1100; alpha-beta protein.,	94.17
1zc6_A		305	Probable N-acetylglucosamine kinase; NESG, Q7NU07_	94.13
1hux_A		270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	94.02
3l0q_A		554	Xylulose kinase; xlylulose kinase, SGX, PSI, struc	93.76
3ifr_A		508	Carbohydrate kinase, FGGY; xylulose kinase, SGX, s	93.33
3hz6_A		511	Xylulokinase; xylulose, structural genomic, chromo	93.13
1zxo_A		291	Conserved hypothetical protein Q8A1P1; NESG, BTR25	92.79
4apw_A		329	ALP12; actin-like protein; 19.70A {Clostridium tet	92.78
4e1j_A		520	Glycerol kinase; structural genomics, PSI-biology,	92.63
2zgy_A		320	Plasmid segregation protein PARM; plasmid partitio	92.59
3h3n_X		506	Glycerol kinase; ATP-binding, glycerol metabolism,	92.47
2itm_A		484	Xylulose kinase, xylulokinase; ATPase, FGGY kinase	92.12
2qm1_A		326	Glucokinase; alpha-beta structure, putative helix-	92.09
3jvp_A		572	Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su	91.06
3djc_A		266	Type III pantothenate kinase; structural genomics,	91.02
3i8b_A		515	Xylulose kinase; strain ATCC 15703 / DSM 20083, 11	90.57
2p3r_A		510	Glycerol kinase; glycerol metabolism, allosteric r	90.32
3g25_A		501	Glycerol kinase; IDP00743, ATP-binding, glycerol m	89.42
3ezw_A		526	Glycerol kinase; glycerol metabolism, allosteric r	89.32
2ch5_A		347	NAGK protein; transferase, N-acetylglucosamine, gl	89.24
3i33_A		404	Heat shock-related 70 kDa protein 2; protein-ADP c	88.78
2dpn_A		495	Glycerol kinase; thermus thermophilus HB8, structu	87.99
3h6e_A		482	Carbohydrate kinase, FGGY; novosphingobium aromati	87.82
3ll3_A		504	Gluconate kinase; xylulose kinase, nysgx, ATP, ADP	87.8
2w40_A		503	Glycerol kinase, putative; closed conformation, ma	87.59
3qfu_A		394	78 kDa glucose-regulated protein homolog; HSP70, K	87.35
2ews_A		287	Pantothenate kinase; PANK, structural genomics, st	86.55
2e2o_A		299	Hexokinase; acetate and sugar kinases, HSP70, acti	86.5
1z6r_A		406	MLC protein; transcriptional repressor, ROK family	86.04
2gup_A		292	ROK family protein; sugar kinase, streptococcus pn	86.01
2i7n_A		360	Pantothenate kinase 1; PANK, transferase; HET: ACO	85.45
4htl_A		297	Beta-glucoside kinase; structural genomics, sugar	85.04
4db3_A		327	Glcnac kinase, N-acetyl-D-glucosamine kinase; stru	84.78
3vgl_A		321	Glucokinase; ROK family, transferase; HET: BGC ANP	84.2
2d4w_A		504	Glycerol kinase; alpha and beta protein, ribonucle	84.16
2aa4_A		289	Mannac kinase, putative N-acetylmannosamine kinase	83.94
2ap1_A		327	Putative regulator protein; zinc binding protein,	83.53
3lm2_A		226	Putative kinase; structural genomics, joint center	82.74
3htv_A		310	D-allose kinase, allokinase; NP_418508.1, structur	82.59
1z05_A		429	Transcriptional regulator, ROK family; structural	81.0
3vov_A		302	Glucokinase, hexokinase; ROK, sugar kinase, transf	80.86
2uyt_A		489	Rhamnulokinase; rhamnose degradation, IN-LINE phos	80.69
3r8e_A		321	Hypothetical sugar kinase; ribonuclease H-like mot	80.26

>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A	Back alignment and structure

Probab=99.81  E-value=4.3e-20  Score=207.44  Aligned_cols=210  Identities=17%  Similarity=0.178  Sum_probs=168.3

Q ss_pred             CceEEEEEcCCCcccccccc--ccceecccchhhHHHHHHhcccccCCCCEEEEecCCCceEEeeee-ceeeeee-----
Q 001049          266 KVNVLFMQSDGGLAPESRFS--GHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYA-GSYEQVL-----  337 (1173)
Q Consensus       266 ~~~l~im~s~GG~~s~~~~~--pv~ti~SGPa~Gv~Ga~~l~~~~~g~~~~I~~DmGGTStDv~li~-G~~~~~~-----  337 (1173)
                      ++|++|.+.|||.++.++++  |++++.|||+|++.-.+.. .    .++.|.+|||||||||..|. |+|....     
T Consensus        84 ~~~v~i~~~dGG~l~~~~a~~~p~~~aaanw~ASa~~~A~~-~----~~~~llvDIGsTTTDIipi~~G~pl~g~tD~eR  158 (334)
T 3cet_A           84 GSNISVFDSNGNFISLESAKTNNMKVSASNWCGTAKWVSKN-I----EENCILVDMGSTTTDIIPIVEGKVVAEKTDLER  158 (334)
T ss_dssp             TTCEEEECSSSCEEETTHHHHCGGGTBCCSSHHHHHHHHHH-T----CSSEEEEEECSSCEEEEEEETTEECCCSSHHHH
T ss_pred             CCceEEEecCCCcccHHHHhhCHHHHHhcCHHHHHHHHHHh-c----CCCEEEEEcCcchhhhhhhcCCeecccCChHHH
Confidence            46899999999999999874  9999999999999933332 1    14899999999999999996 9996532     


Q ss_pred             -----eeEEccEEEeecceeeEEEeccCCcEEEEeCCeEEECccccCCCCCcceeccCCccccchHHHHccccCCCCCCC
Q 001049          338 -----ETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPS  412 (1173)
Q Consensus       338 -----~~~i~g~~~~~p~~di~sIGaGGGSia~v~~G~l~VGP~SAGa~PGPacYg~GG~pTvTDA~lvLG~l~p~~fl~  412 (1173)
                           -.+++.+++.++.+- +||+.||.|.        +|+||.              .+|.+||+++||.++++.+.-
T Consensus       159 L~~gElvy~G~~RT~V~aL~-~sv~~gG~~~--------~v~~E~--------------fATtaDa~~vLG~i~~~d~~~  215 (334)
T 3cet_A          159 LMNHELLYVGTLRTPISHLG-NTISFKGVDT--------NVSSEY--------------FAITADISVVLEKVTTEEYTC  215 (334)
T ss_dssp             HTTTSEECCCSSCCBGGGGC-SEEEETTEEE--------ECCCSS--------------CCBHHHHHHHTTSSCGGGCCS
T ss_pred             hccCCcEEEccccChHHHHh-hhcccCCEEE--------eecccc--------------cccHHHHHHHhCCCCcccccC
Confidence                 246689999999999 9999999988        788876              489999999999999887641


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHhhccccCCCCCCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 001049          413 IFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMT--------VEDIALGFVNVANETMCRPIRQLTEMKGHET  484 (1173)
Q Consensus       413 ~~g~gG~~~Ld~~~a~~a~~~ia~~lg~~~~~~~~~~~gl~--------~eeaA~gi~~ia~~~Ma~air~~~~~rG~dp  484 (1173)
                       --+.|    -...++.++++||+.++            .+        .++.|+.+++...+.+.++++++..+.+++ 
T Consensus       216 -~taDg----~~k~~~~~~~RLAr~vg------------~D~~~~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~~-  277 (334)
T 3cet_A          216 -DTPDG----KGTDKRSSLVRISKVLC------------SDLDQISEIDAENIAKNYYELWKELILENVENVAEKYGSK-  277 (334)
T ss_dssp             -CCTTS----CCCSHHHHHHHHHHTTT------------CCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred             -cCcCC----ccccHHHHHHHHHHHhC------------CChhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence             00112    12345677888999887            55        889999999999999999999999887666 


Q ss_pred             CCceEEEEcCchhhhHHHHHHHcCCCEEE-----E-CCCCCccchhcccc
Q 001049          485 RNHALACFGGAGPQHACAIARSLGMREVL-----I-HRFCGILSAYGMGL  528 (1173)
Q Consensus       485 rdf~LvafGGaGplha~~lA~~lGi~~Vi-----v-P~~~~v~sA~G~~~  528 (1173)
                         .++.-||+ .-.+..+|++   ..++     + |.++.+++|+|++.
T Consensus       278 ---~vv~aG~G-~~L~~~la~~---~~~~~~~~~i~~~~s~vapA~avA~  320 (334)
T 3cet_A          278 ---KVVITGLG-ENILKDALAD---FEVISVAERYGKDVSLATPSFAVAE  320 (334)
T ss_dssp             ---EEEEESTT-HHHHHHHTTT---SEEEEHHHHHCHHHHHSHHHHHHHH
T ss_pred             ---eEEEeCCc-HHHHHHHHhh---CCeeehhcccCcccccccCHHHHHH
Confidence               56777765 6666777766   3455     6 88899999999873

PyMOL of 3cet

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A	Back alignment and structure

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}	Back alignment and structure

>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}	Back alignment and structure

>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5	Back alignment and structure

>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5	Back alignment and structure

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5	Back alignment and structure

>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*	Back alignment and structure

>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}	Back alignment and structure

>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*	Back alignment and structure

>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5	Back alignment and structure

>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}	Back alignment and structure

>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}	Back alignment and structure

>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A	Back alignment and structure

>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O	Back alignment and structure

>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A	Back alignment and structure

>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}	Back alignment and structure

>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}	Back alignment and structure

>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}	Back alignment and structure

>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*	Back alignment and structure

>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*	Back alignment and structure

>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*	Back alignment and structure

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...	Back alignment and structure

>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}	Back alignment and structure

>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}	Back alignment and structure

>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*	Back alignment and structure

>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*	Back alignment and structure

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14	Back alignment and structure

>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*	Back alignment and structure

>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A	Back alignment and structure

>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*	Back alignment and structure

>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}	Back alignment and structure

>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}	Back alignment and structure

>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*	Back alignment and structure

>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}	Back alignment and structure

>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}	Back alignment and structure

>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}	Back alignment and structure

>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10	Back alignment and structure

>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}	Back alignment and structure

>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*	Back alignment and structure

>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1173
d1zc6a1		114	Probable N-acetylglucosamine kinase CV2896 {Chromo	97.33
d1huxa_		259	Hydroxyglutaryl-CoA dehydratase component A {Acida	96.76
d2ch5a2		117	N-acetylglucosamine kinase, NAGK {Human (Homo sapi	96.51
d2ap1a2		117	Putative regulator protein YcfX {Salmonella typhim	95.94
d2aa4a1		119	N-acetylmannosamine kinase NanK {Escherichia coli	95.43
d2zgya2		163	Plasmid segregation protein ParM {Escherichia coli	94.55
d2ewsa1		267	Type II pantothenate kinase, CoaW {Staphylococcus	93.96
d1woqa1		129	Inorganic polyphosphate/ATP-glucomannokinase PPGMK	92.71
d1zbsa2		107	Hypothetical protein PG1100 {Porphyromonas gingiva	92.61
d2gupa1		114	Hypothetical protein SP2142 {Streptococcus pneumon	91.04
d1xc3a1		118	Putative fructokinase YhdR {Bacillus subtilis [Tax	89.85
d1q18a1		110	Glucokinase Glk {Escherichia coli [TaxId: 562]}	88.96
d2hoea3		128	N-acetylglucosamine kinase {Thermotoga maritima [T	88.27
d2p3ra1		252	Glycerol kinase {Escherichia coli [TaxId: 562]}	87.12
d1sz2a1		319	Glucokinase Glk {Escherichia coli [TaxId: 562]}	85.84
d1bupa2		193	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	83.6
d1dkgd2		198	Heat shock protein 70kDa, ATPase fragment {Escheri	82.86
d1jcea2		196	Prokaryotic actin homolog MreB {Thermotoga maritim	81.3
d1z05a3		128	Transcriptional regulator VC2007 {Vibrio cholerae	80.4

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Probable N-acetylglucosamine kinase CV2896
species: Chromobacterium violaceum [TaxId: 536]

Probab=97.33  E-value=0.0001  Score=68.29  Aligned_cols=55  Identities=13%  Similarity=-0.019  Sum_probs=36.6

Q ss_pred             CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHhh
Q 001049            7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYT   61 (1173)
Q Consensus         7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~~   61 (1173)
                      |+|.||||+|||.|.++++|.+|+++...+..++.+..-.+..++.|.+++++++
T Consensus         3 m~y~lGID~GGT~tk~~l~d~~G~il~~~~~~~~~~~~~~~~~~~~i~~~i~~~~   57 (114)
T d1zc6a1           3 IRYLIGVDGGGTGTRIRLHASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAAF   57 (114)
T ss_dssp             CCEEEEEEECSSCEEEEEEETTCCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEEEcCcceEEEEEEcCCCCEEEEEEccCCCcccCHHHHHHHHHHHHHHHH
Confidence            4599999999999999999988885555555443332222344555555555543

PyMOL of d1zc6a1

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}	Back information, alignment and structure

>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]}	Back information, alignment and structure

>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}	Back information, alignment and structure

>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}	Back information, alignment and structure

>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure