Citrus Sinensis ID: 001573
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1051 | 2.2.26 [Sep-21-2011] | |||||||
| Q8CG46 | 1101 | Structural maintenance of | yes | no | 0.949 | 0.906 | 0.308 | 1e-133 | |
| Q8IY18 | 1101 | Structural maintenance of | yes | no | 0.949 | 0.906 | 0.312 | 1e-129 | |
| Q802R9 | 1092 | Structural maintenance of | N/A | no | 0.931 | 0.896 | 0.317 | 1e-125 | |
| Q5ZJY5 | 1065 | Structural maintenance of | yes | no | 0.935 | 0.923 | 0.301 | 1e-121 | |
| Q805A1 | 1065 | Structural maintenance of | N/A | no | 0.933 | 0.921 | 0.290 | 1e-117 | |
| O13710 | 1076 | Structural maintenance of | yes | no | 0.934 | 0.912 | 0.275 | 7e-84 | |
| Q08204 | 1093 | Structural maintenance of | yes | no | 0.928 | 0.892 | 0.262 | 1e-67 | |
| Q924W5 | 1097 | Structural maintenance of | no | no | 0.886 | 0.849 | 0.226 | 4e-25 | |
| Q6P9I7 | 1128 | Structural maintenance of | N/A | no | 0.202 | 0.188 | 0.281 | 1e-14 | |
| Q802R8 | 1090 | Structural maintenance of | N/A | no | 0.249 | 0.240 | 0.268 | 5e-13 |
| >sp|Q8CG46|SMC5_MOUSE Structural maintenance of chromosomes protein 5 OS=Mus musculus GN=Smc5 PE=2 SV=1 | Back alignment and function desciption |
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Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 330/1070 (30%), Positives = 568/1070 (53%), Gaps = 72/1070 (6%)
Query: 11 VSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGD 70
+ R ++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 41 LPRPSGTFVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGK 100
Query: 71 TQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPK 129
+GRA +G +VKRG G ++I L + +L I R+ID +N+S WF N K V +
Sbjct: 101 PAFMGRADKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQ 158
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
V E NIQV NL QFLPQD+V EFAKLS ++LLE TEK+VG P++ HC L
Sbjct: 159 KIVEEQVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHRYHCELKNF 218
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
K K +E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+
Sbjct: 219 REKEKQLETSCKEKTEYLEKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENV 278
Query: 250 KAEYIAAK---EQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ EY K ++ K+ +KL E + ++ IE +++ L+ K+ S+ I E S
Sbjct: 279 RQEYEGVKLIRDRVKEEVRKLKEGQIPM---TRRIEEIDRQRHTLEVRIKEKSTDIKEAS 335
Query: 307 ---KRRMDFLEKVDQVGVQVQGKYKEMQELRRQEQSRQQRILKAREELAAAELDLQTVPA 363
K+R D +E+ D+ Q++ + + + +E RQ+RI R+ + + +L+T
Sbjct: 336 QKCKQRQDLIERKDR---QIKELQQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAEN 392
Query: 364 YE---PPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDK 419
E P D + ++ E + + K ++++L + + ++ R + M K
Sbjct: 393 CENLQPQIDTVTNDLRRVQEEKALCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQK 452
Query: 420 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY 479
+KL R++ ++A WL+ +R + P++L +N+ + +A Y+E+H+
Sbjct: 453 EDKLRQRYRDT-----YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSN 507
Query: 480 IWKSFITQDAGDRDFLAKNLK--------PFDVPILNYVSNESSRKEPFQISEEMRALGI 531
++F+ + D + + ++ P ++Y K P + +++ G
Sbjct: 508 DLRAFVFESQEDMEIFLREVRDNKKLRVNAVIAPKISYAD-----KAPSRSLNDLKQYGF 562
Query: 532 SARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGIL-DFWTPENHYRWS 590
+ L ++FDAP V L Q+ + +G++ T ++ + V + L +T E Y
Sbjct: 563 FSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLK 622
Query: 591 ISRYGGHVSASVEPVNQSRLLLCSVDGNEIERLRSKKKKLEESVDELEESLKSMQTEQRL 650
S Y V +S + ++ L +VD + L + K++ ++ ++ L +++ R
Sbjct: 623 TSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEMNRQLEAVDSGLAALRDTNRH 682
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI---------------NLRKRKLESIEK 695
+E + +L+ +++E++ K ++R++E I NL + + ++ K
Sbjct: 683 LELKDNELRLKKKELLE----RKTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTK 738
Query: 696 EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 755
+IN AKLV + L + I+ +L+++ + +EK+ ++ A +L
Sbjct: 739 IKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNTTV---ISEKNKLEADYMASSSQL 795
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK------- 806
+Q +L + CK+ ++ R+ + + QA F T P +
Sbjct: 796 RVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPP 855
Query: 807 -EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK 865
F ++P T++E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL
Sbjct: 856 MAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSKREVEIQQLTEELQGKKVELD 915
Query: 866 RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSL-DEHESDFDKFGILIKV 924
+ I +KE+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+V
Sbjct: 916 EYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRV 975
Query: 925 KFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQ 984
KFR S QL L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+
Sbjct: 976 KFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFE 1035
Query: 985 QLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
+V A + NT Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1036 MVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1084
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Core component of the SMC5-SMC6 complex, a complex involved in repair of DNA double-strand breaks by homologous recombination. The complex may promote sister chromatid homologous recombination by recruiting the SMC1-SMC3 cohesin complex to double-strand breaks. The complex is required for telomere maintenance via recombination and mediates sumoylation of shelterin complex (telosome) components. Required for sister chromatid cohesion during prometaphase and mitotic progression; the function seems to be independent of SMC6. Mus musculus (taxid: 10090) |
| >sp|Q8IY18|SMC5_HUMAN Structural maintenance of chromosomes protein 5 OS=Homo sapiens GN=SMC5 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q802R9|SMC5_TAKRU Structural maintenance of chromosomes protein 5 OS=Takifugu rubripes GN=smc5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes protein 5 OS=Gallus gallus GN=SMC5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q805A1|SMC5_XENLA Structural maintenance of chromosomes protein 5 OS=Xenopus laevis GN=smc5 PE=2 SV=1 | Back alignment and function description |
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| >sp|O13710|SMC5_SCHPO Structural maintenance of chromosomes protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=smc5 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q08204|SMC5_YEAST Structural maintenance of chromosomes protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMC5 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q924W5|SMC6_MOUSE Structural maintenance of chromosomes protein 6 OS=Mus musculus GN=Smc6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6P9I7|SMC6_XENLA Structural maintenance of chromosomes protein 6 OS=Xenopus laevis GN=smc6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q802R8|SMC6_TAKRU Structural maintenance of chromosomes protein 6 OS=Takifugu rubripes GN=smc6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1051 | ||||||
| 225450013 | 1051 | PREDICTED: structural maintenance of chr | 0.996 | 0.996 | 0.779 | 0.0 | |
| 255553458 | 1057 | structural maintenance of chromosomes 5 | 0.992 | 0.986 | 0.753 | 0.0 | |
| 449436331 | 1053 | PREDICTED: structural maintenance of chr | 0.996 | 0.994 | 0.744 | 0.0 | |
| 449488823 | 1053 | PREDICTED: LOW QUALITY PROTEIN: structur | 0.996 | 0.994 | 0.741 | 0.0 | |
| 297807615 | 1052 | structural maintenance of chromosomes fa | 0.996 | 0.995 | 0.696 | 0.0 | |
| 15237219 | 1053 | structural maintenance of chromosomes 5 | 0.987 | 0.985 | 0.703 | 0.0 | |
| 356576425 | 1059 | PREDICTED: structural maintenance of chr | 0.994 | 0.986 | 0.660 | 0.0 | |
| 357132304 | 1058 | PREDICTED: structural maintenance of chr | 0.984 | 0.978 | 0.605 | 0.0 | |
| 115465843 | 1065 | Os05g0596600 [Oryza sativa Japonica Grou | 0.984 | 0.971 | 0.612 | 0.0 | |
| 222632791 | 1103 | hypothetical protein OsJ_19783 [Oryza sa | 0.982 | 0.936 | 0.612 | 0.0 |
| >gi|225450013|ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis vinifera] gi|297736324|emb|CBI24962.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1689 bits (4375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/1047 (77%), Positives = 925/1047 (88%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R KR K++RGEDDY+PGNI EIELHNFMTF+ L CKPGSRLNLVIGPNGSGKSSLVCAIA
Sbjct: 5 RSKRPKITRGEDDYLPGNITEIELHNFMTFNDLKCKPGSRLNLVIGPNGSGKSSLVCAIA 64
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
L LGGD QLLGRA+SIGAYVKRGEESGYIKISLRGDT+EE +TIMRKIDTRNKSEW FNG
Sbjct: 65 LGLGGDPQLLGRASSIGAYVKRGEESGYIKISLRGDTEEEQITIMRKIDTRNKSEWLFNG 124
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
KVVPK +V+EI +RFNIQVNNLTQFLPQDRV EFAKL+PV+LLEETEKAVGDPQLPVQHC
Sbjct: 125 KVVPKKDVIEIVRRFNIQVNNLTQFLPQDRVSEFAKLTPVQLLEETEKAVGDPQLPVQHC 184
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
ALV KS +LK +E V++NG+ LN LK LN E+EKDVERVRQR ELL KVESMKKKLPWL
Sbjct: 185 ALVLKSRELKKLEKAVEQNGEMLNCLKTLNSEREKDVERVRQRQELLAKVESMKKKLPWL 244
Query: 245 KYDMKKAEYIAAKEQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
KYDM+K Y+ AKEQE DAKKKLDEAA TL++ +PIE ++QEKA LD CKK+S L+N
Sbjct: 245 KYDMQKVRYMEAKEQENDAKKKLDEAAKTLNDIREPIEKQRQEKAALDAKCKKVSGLMNG 304
Query: 305 NSKRRMDFLEKVDQVGVQVQGKYKEMQELRRQEQSRQQRILKAREELAAAELDLQTVPAY 364
NSKRRM+ LEK +++GVQ +GKY EM+ELRRQE+SRQQRI KA+E+L AAEL+L ++P Y
Sbjct: 305 NSKRRMELLEKENRLGVQARGKYNEMEELRRQEESRQQRISKAKEDLVAAELELASLPPY 364
Query: 365 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
E P D+IE+LGSQILEL A+QKRL KSEKEK+L Q K LRQC DRLKDME+KNNKLL
Sbjct: 365 EHPKDEIERLGSQILELEFSASQKRLVKSEKEKLLGQKKGALRQCVDRLKDMENKNNKLL 424
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 484
AL+NSGAE IFEAY WLQ+HRHELNK+ YGPVLLEVNVS+R HA+YLE H+ +YIWKSF
Sbjct: 425 QALQNSGAEKIFEAYHWLQEHRHELNKDVYGPVLLEVNVSHRIHADYLEGHIPYYIWKSF 484
Query: 485 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHA 544
ITQD DRDFL KNL+ FDVP+LNYV NE KEPFQISEEMR LGIS+RLDQVFD+P A
Sbjct: 485 ITQDPDDRDFLVKNLRLFDVPVLNYVRNEDRHKEPFQISEEMRKLGISSRLDQVFDSPDA 544
Query: 545 VKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 604
VKEVL SQF L+ SYIGS+ETDQKAD V+KLGILDFWTPENHYRWS+SRYGGHVSA VEP
Sbjct: 545 VKEVLTSQFALEHSYIGSRETDQKADEVSKLGILDFWTPENHYRWSVSRYGGHVSAIVEP 604
Query: 605 VNQSRLLLCSVDGNEIERLRSKKKKLEESVDELEESLKSMQTEQRLIEDEAAKLQKEREE 664
V +SRLL+CS D EIERLRSKKK+LEE +D+LEE+ KS+Q EQRL+EDEAAKL K+REE
Sbjct: 605 VARSRLLVCSTDTGEIERLRSKKKELEEIIDDLEENFKSLQIEQRLLEDEAAKLHKQREE 664
Query: 665 IINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEI 724
IIN VQ+EKRKRREMEN ++ RKRKLES+EKEDD++T +AKL+DQAA NIQ+++ IEI
Sbjct: 665 IINTVQLEKRKRREMENRVSQRKRKLESMEKEDDLDTVMAKLIDQAAKFNIQRYQCVIEI 724
Query: 725 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 784
KNLL+E VS K ++AEKHM SIEFDAKIRELE +KQ E+ A+QASLH+E+CKKEVE R
Sbjct: 725 KNLLIESVSYKRTFAEKHMTSIEFDAKIRELEVGIKQQERFAMQASLHFENCKKEVEDHR 784
Query: 785 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
+ L+ AKR AESIA ITP LEK FLEMP TIE+LEAAIQD ISQANSI FLN NIL+EYE
Sbjct: 785 QQLAAAKRHAESIAVITPVLEKAFLEMPATIEDLEAAIQDTISQANSILFLNHNILEEYE 844
Query: 845 HRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 904
Q++IE +STK EAD+KEL+ +LAEIDALKE WL TLRNLVAQINETFSRNFQ+MAVAG
Sbjct: 845 ECQQKIEAISTKLEADEKELRMYLAEIDALKENWLTTLRNLVAQINETFSRNFQDMAVAG 904
Query: 905 EVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPF 964
EVSLDEH+ DFD+FGILIKVKFRQ+G+L+VLSAHHQSGGERSV+TILYLVSLQDLTNCPF
Sbjct: 905 EVSLDEHDIDFDQFGILIKVKFRQAGELQVLSAHHQSGGERSVATILYLVSLQDLTNCPF 964
Query: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP
Sbjct: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
Query: 1025 WIEQPSKVWSSGECWGTVTGLVGESRC 1051
WIEQPSKVWS+G+CWGTV GL+G+S+C
Sbjct: 1025 WIEQPSKVWSNGDCWGTVVGLLGKSQC 1051
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553458|ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus communis] gi|223543042|gb|EEF44577.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449436331|ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449488823|ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297807615|ref|XP_002871691.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] gi|297317528|gb|EFH47950.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15237219|ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis thaliana] gi|332004841|gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356576425|ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357132304|ref|XP_003567770.1| PREDICTED: structural maintenance of chromosomes protein 5-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|115465843|ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] gi|57900674|gb|AAW57799.1| putative SMC5 protein [Oryza sativa Japonica Group] gi|113580072|dbj|BAF18435.1| Os05g0596600 [Oryza sativa Japonica Group] gi|215768112|dbj|BAH00341.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|222632791|gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1051 | ||||||
| TAIR|locus:2146107 | 1053 | SMC5 "AT5G15920" [Arabidopsis | 0.996 | 0.994 | 0.662 | 0.0 | |
| DICTYBASE|DDB_G0290919 | 1131 | smc5 "AAA ATPase domain-contai | 0.630 | 0.586 | 0.296 | 2.6e-124 | |
| UNIPROTKB|D4A4D0 | 1088 | Smc5 "Protein Smc5" [Rattus no | 0.957 | 0.924 | 0.294 | 3e-124 | |
| UNIPROTKB|F1PEG5 | 1044 | SMC5 "Uncharacterized protein" | 0.956 | 0.962 | 0.293 | 3.5e-123 | |
| ZFIN|ZDB-GENE-061013-288 | 1073 | smc5 "structural maintenance o | 0.959 | 0.939 | 0.292 | 2.8e-121 | |
| UNIPROTKB|Q5ZJY5 | 1065 | SMC5 "Structural maintenance o | 0.948 | 0.936 | 0.294 | 1.9e-113 | |
| UNIPROTKB|Q805A1 | 1065 | smc5 "Structural maintenance o | 0.957 | 0.944 | 0.278 | 2.6e-111 | |
| UNIPROTKB|F1P1S9 | 1041 | SMC5 "Structural maintenance o | 0.941 | 0.950 | 0.293 | 2.1e-109 | |
| UNIPROTKB|F1P1S0 | 1066 | SMC5 "Structural maintenance o | 0.949 | 0.936 | 0.293 | 4.3e-109 | |
| UNIPROTKB|F1NK20 | 1043 | SMC5 "Structural maintenance o | 0.946 | 0.953 | 0.291 | 1.1e-108 |
| TAIR|locus:2146107 SMC5 "AT5G15920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3541 (1251.6 bits), Expect = 0., P = 0.
Identities = 694/1048 (66%), Positives = 812/1048 (77%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R KR K+SRGEDD++PGNIIEIELHNFMTF+HL+CKPGSRLNLVIGPNGSGKSSLVCAIA
Sbjct: 5 RAKRPKISRGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLVCAIA 64
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
L LGG+ QLLGRATS+GAYVKRGE+SGY+KISLRG+T+EE+LTI RKIDTRNKSEW FNG
Sbjct: 65 LCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTRNKSEWMFNG 124
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
V K +++EI ++FNIQVNNLTQFLPQDRVCEFAKL+PV+LLEETEKAVGDPQLPV H
Sbjct: 125 STVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVHHR 184
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
ALVEKS LK +E V +NG+TLNQLKAL EQEKDVERVRQR L KV+SMKKKLPWL
Sbjct: 185 ALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMKKKLPWL 244
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
KYDMKKAEY+ L+ +PIE +K+EKA D CKK+ +L++
Sbjct: 245 KYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKVKNLMDA 304
Query: 305 NSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY 364
N + R LEK D YK ILKA Q +P Y
Sbjct: 305 NGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAERELQNLPVY 364
Query: 365 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
E P K+E+L SQ+ EL N K+ QK + EK+L+Q + TLRQC D+LKDME+ NNKLL
Sbjct: 365 ERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENANNKLL 424
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 484
AL NSGA+ IF+AY W+QQ+RHE +E YGPVL+EVNV NR +A +LE HV YIWKSF
Sbjct: 425 KALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVSFYIWKSF 484
Query: 485 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHA 544
ITQD DRD L KNLK FDVP+LNYV N ++K PF IS++MR+LGI ARLDQ+FDAP A
Sbjct: 485 ITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQIFDAPDA 544
Query: 545 VKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 604
VKEVL SQFGL+ SYIGSK TDQ+A+ V KLGI DFWTP+NHYRWS SRYGGH SASV+
Sbjct: 545 VKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHSSASVDS 604
Query: 605 VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREE 664
V QSRLLLC VD +QTEQR +E+EAAKL KEREE
Sbjct: 605 VYQSRLLLCGVDVGELEKLRSRKEELEDSILFMEETHKSLQTEQRRLEEEAAKLHKEREE 664
Query: 665 IINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEI 724
I+N+ +EK+KRRE+E+ RK KLES+E+E+D++ ++AKL+DQA+ N ++ YAI +
Sbjct: 665 IVNVSYLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQASRANADRYTYAINL 724
Query: 725 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 784
K LLVE V+ KWSYAEKHMASIE + KIRE E N+KQ+EK A Q SL E CKKEVE +
Sbjct: 725 KKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYCKKEVEGKQ 784
Query: 785 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
+ L+ AKR AES+A ITPEL+KEF+EMPTT+EELEAAIQDN+SQANSI F+N+NILQEYE
Sbjct: 785 QRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFINENILQEYE 844
Query: 845 HRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 904
HRQ QI +STK E DK++L + EID+LKEKWLPTLR LV QINETFS NFQEMAVAG
Sbjct: 845 HRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQEMAVAG 904
Query: 905 EVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPF 964
EVSLDE ++DFD++GI IKVKFR+SGQL+VLS+HHQSGGERSVSTILYLVSLQDLTNCPF
Sbjct: 905 EVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLTNCPF 964
Query: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSEACSILNIMNGP
Sbjct: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNIMNGP 1024
Query: 1025 WIEQPSKVWSSGECWGTVTGLVGE-SRC 1051
+I +PSKVWS G+ WG++ E S+C
Sbjct: 1025 YIAEPSKVWSLGDSWGSLNRRRTEASQC 1052
|
|
| DICTYBASE|DDB_G0290919 smc5 "AAA ATPase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D4A4D0 Smc5 "Protein Smc5" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEG5 SMC5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-061013-288 smc5 "structural maintenance of chromosomes 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5ZJY5 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q805A1 smc5 "Structural maintenance of chromosomes protein 5" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P1S9 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P1S0 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NK20 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8IY18 | SMC5_HUMAN | No assigned EC number | 0.3125 | 0.9495 | 0.9064 | yes | no |
| Q8CG46 | SMC5_MOUSE | No assigned EC number | 0.3084 | 0.9495 | 0.9064 | yes | no |
| Q5ZJY5 | SMC5_CHICK | No assigned EC number | 0.3016 | 0.9352 | 0.9230 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1051 | |||
| cd03277 | 213 | cd03277, ABC_SMC5_euk, ATP-binding cassette domain | 3e-60 | |
| cd03277 | 213 | cd03277, ABC_SMC5_euk, ATP-binding cassette domain | 3e-50 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-32 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-26 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-19 | |
| cd03276 | 198 | cd03276, ABC_SMC6_euk, ATP-binding cassette domain | 3e-19 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 3e-16 | |
| cd03239 | 178 | cd03239, ABC_SMC_head, The SMC head domain belongs | 1e-15 | |
| cd03239 | 178 | cd03239, ABC_SMC_head, The SMC head domain belongs | 1e-14 | |
| cd03275 | 247 | cd03275, ABC_SMC1_euk, ATP-binding cassette domain | 2e-12 | |
| pfam13476 | 204 | pfam13476, AAA_23, AAA domain | 8e-12 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-11 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-10 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-10 | |
| cd03227 | 162 | cd03227, ABC_Class2, ATP-binding cassette domain o | 1e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-08 | |
| cd03227 | 162 | cd03227, ABC_Class2, ATP-binding cassette domain o | 5e-08 | |
| cd03276 | 198 | cd03276, ABC_SMC6_euk, ATP-binding cassette domain | 1e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-07 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 2e-07 | |
| pfam13555 | 60 | pfam13555, AAA_29, P-loop containing region of AAA | 2e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 6e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-06 | |
| cd03240 | 204 | cd03240, ABC_Rad50, ATP-binding cassette domain of | 3e-06 | |
| cd03241 | 276 | cd03241, ABC_RecN, ATP-binding cassette domain of | 8e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 6e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 7e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 8e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-05 | |
| cd03272 | 243 | cd03272, ABC_SMC3_euk, ATP-binding cassette domain | 3e-04 | |
| COG2433 | 652 | COG2433, COG2433, Uncharacterized conserved protei | 4e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 4e-04 | |
| COG1106 | 371 | COG1106, COG1106, Predicted ATPases [General funct | 6e-04 | |
| cd03278 | 197 | cd03278, ABC_SMC_barmotin, ATP-binding cassette do | 7e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 7e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.002 | |
| cd00267 | 157 | cd00267, ABC_ATPase, ATP-binding cassette transpor | 0.002 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 0.002 | |
| cd03223 | 166 | cd03223, ABCD_peroxisomal_ALDP, ATP-binding casset | 0.002 | |
| COG3593 | 581 | COG3593, COG3593, Predicted ATP-dependent endonucl | 0.003 | |
| TIGR00611 | 365 | TIGR00611, recf, recF protein | 0.003 | |
| COG1195 | 363 | COG1195, RecF, Recombinational DNA repair ATPase ( | 0.003 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.004 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.004 | |
| PRK00064 | 361 | PRK00064, recF, recombination protein F; Reviewed | 0.004 |
| >gnl|CDD|213244 cd03277, ABC_SMC5_euk, ATP-binding cassette domain of eukaryotic SMC5 proteins | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 3e-60
Identities = 68/103 (66%), Positives = 79/103 (76%)
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
VKFR+ QL+ L HHQSGGERSVST+LYL+SLQ+LT CPFRVVDEINQGMDP NERK+F
Sbjct: 111 VKFREGEQLQELDPHHQSGGERSVSTMLYLLSLQELTRCPFRVVDEINQGMDPTNERKVF 170
Query: 984 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWI 1026
LV A + T Q FL+TPKLLP L Y E ++L + NGP I
Sbjct: 171 DMLVETACKEGTSQYFLITPKLLPGLNYHEKMTVLCVYNGPHI 213
|
The structural maintenance of chromosomes (SMC) proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains. Amino-acid sequence homology of SMC proteins between species is largely confined to the amino- and carboxy-terminal globular domains. The amino-terminal domain contains a 'Walker A' nucleotide-binding domain (GxxGxGKS/T, in the single-letter amino-acid code), which by mutational studies has been shown to be essential in several proteins. The carboxy-terminal domain contains a sequence (the DA-box) that resembles a 'Walker B' motif, and a motif with homology to the signature sequence of the ATP-binding cassette (ABC) family of ATPases. The sequence homology within the carboxy-terminal domain is relatively high within the SMC1-SMC4 group, whereas SMC5 and SMC6 show some divergence in both of these sequences. In eukaryotic cells, the proteins are found as heterodimers of SMC1 paired with SMC3, SMC2 with SMC4, and SMC5 with SMC6 (formerly known as Rad18). Length = 213 |
| >gnl|CDD|213244 cd03277, ABC_SMC5_euk, ATP-binding cassette domain of eukaryotic SMC5 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213243 cd03276, ABC_SMC6_euk, ATP-binding cassette domain of eukaryotic SM6 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|213206 cd03239, ABC_SMC_head, The SMC head domain belongs to the ATP-binding cassette superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|213206 cd03239, ABC_SMC_head, The SMC head domain belongs to the ATP-binding cassette superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|213242 cd03275, ABC_SMC1_euk, ATP-binding cassette domain of eukaryotic SMC1 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|222160 pfam13476, AAA_23, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|213194 cd03227, ABC_Class2, ATP-binding cassette domain of non-transporter proteins | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213194 cd03227, ABC_Class2, ATP-binding cassette domain of non-transporter proteins | Back alignment and domain information |
|---|
| >gnl|CDD|213243 cd03276, ABC_SMC6_euk, ATP-binding cassette domain of eukaryotic SM6 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|205733 pfam13555, AAA_29, P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213207 cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|213208 cd03241, ABC_RecN, ATP-binding cassette domain of RecN | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|213239 cd03272, ABC_SMC3_euk, ATP-binding cassette domain of eukaryotic SMC3 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|224031 COG1106, COG1106, Predicted ATPases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|213245 cd03278, ABC_SMC_barmotin, ATP-binding cassette domain of barmotin, a member of the SMC protein family | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|213179 cd00267, ABC_ATPase, ATP-binding cassette transporter nucleotide-binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|213190 cd03223, ABCD_peroxisomal_ALDP, ATP-binding cassette domain of peroxisomal transporter, subfamily D | Back alignment and domain information |
|---|
| >gnl|CDD|226121 COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233051 TIGR00611, recf, recF protein | Back alignment and domain information |
|---|
| >gnl|CDD|224116 COG1195, RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234608 PRK00064, recF, recombination protein F; Reviewed | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1051 | |||
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 100.0 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 100.0 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 100.0 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 100.0 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 100.0 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 100.0 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 100.0 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 100.0 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 100.0 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 100.0 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 100.0 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 100.0 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 100.0 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 100.0 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 100.0 | |
| PRK10246 | 1047 | exonuclease subunit SbcC; Provisional | 100.0 | |
| TIGR00618 | 1042 | sbcc exonuclease SbcC. This family is based on the | 100.0 | |
| COG4717 | 984 | Uncharacterized conserved protein [Function unknow | 100.0 | |
| PF13514 | 1111 | AAA_27: AAA domain | 100.0 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 100.0 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 100.0 | |
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 99.97 | |
| KOG0962 | 1294 | consensus DNA repair protein RAD50, ABC-type ATPas | 99.97 | |
| PF02463 | 220 | SMC_N: RecF/RecN/SMC N terminal domain; InterPro: | 99.97 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 99.97 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 99.97 | |
| COG4913 | 1104 | Uncharacterized protein conserved in bacteria [Fun | 99.96 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 99.95 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 99.9 | |
| cd03273 | 251 | ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC protein | 99.89 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 99.88 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 99.88 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 99.87 | |
| cd03275 | 247 | ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC protein | 99.86 | |
| cd03242 | 270 | ABC_RecF RecF is a recombinational DNA repair ATPa | 99.84 | |
| PRK00064 | 361 | recF recombination protein F; Reviewed | 99.84 | |
| cd03241 | 276 | ABC_RecN RecN ATPase involved in DNA repair; ABC ( | 99.83 | |
| PRK14079 | 349 | recF recombination protein F; Provisional | 99.83 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 99.82 | |
| cd03277 | 213 | ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC protein | 99.81 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 99.81 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 99.8 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 99.77 | |
| cd03272 | 243 | ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC protein | 99.77 | |
| COG1195 | 363 | RecF Recombinational DNA repair ATPase (RecF pathw | 99.74 | |
| TIGR00611 | 365 | recf recF protein. All proteins in this family for | 99.74 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 99.69 | |
| cd03239 | 178 | ABC_SMC_head The structural maintenance of chromos | 99.69 | |
| COG3096 | 1480 | MukB Uncharacterized protein involved in chromosom | 99.66 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 99.65 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 99.64 | |
| cd03276 | 198 | ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC protein | 99.62 | |
| PF13476 | 202 | AAA_23: AAA domain; PDB: 3AV0_B 3AUY_B 3AUX_A 2O5V | 99.62 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 99.6 | |
| cd03240 | 204 | ABC_Rad50 The catalytic domains of Rad50 are simil | 99.55 | |
| cd03279 | 213 | ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complex | 99.52 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.51 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 99.5 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 99.49 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.42 | |
| cd03278 | 197 | ABC_SMC_barmotin Barmotin is a tight junction-asso | 99.37 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 99.29 | |
| cd03277 | 213 | ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC protein | 99.27 | |
| cd03274 | 212 | ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC protein | 99.26 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 99.23 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 99.2 | |
| COG3950 | 440 | Predicted ATP-binding protein involved in virulenc | 99.17 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 99.15 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 99.13 | |
| cd03227 | 162 | ABC_Class2 ABC-type Class 2 contains systems invol | 99.03 | |
| PF13166 | 712 | AAA_13: AAA domain | 98.89 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 98.89 | |
| PF11398 | 373 | DUF2813: Protein of unknown function (DUF2813); In | 98.81 | |
| cd03276 | 198 | ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC protein | 98.8 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.78 | |
| PF04310 | 227 | MukB: MukB N-terminal; InterPro: IPR007406 This is | 98.65 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.62 | |
| COG3593 | 581 | Predicted ATP-dependent endonuclease of the OLD fa | 98.62 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 98.61 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 98.61 | |
| COG1106 | 371 | Predicted ATPases [General function prediction onl | 98.6 | |
| cd03239 | 178 | ABC_SMC_head The structural maintenance of chromos | 98.53 | |
| PF13175 | 415 | AAA_15: AAA ATPase domain | 98.52 | |
| cd03278 | 197 | ABC_SMC_barmotin Barmotin is a tight junction-asso | 98.49 | |
| COG4637 | 373 | Predicted ATPase [General function prediction only | 98.47 | |
| PF13166 | 712 | AAA_13: AAA domain | 98.47 | |
| TIGR00611 | 365 | recf recF protein. All proteins in this family for | 98.47 | |
| COG5293 | 591 | Predicted ATPase [General function prediction only | 98.42 | |
| COG3910 | 233 | Predicted ATPase [General function prediction only | 98.4 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 98.39 | |
| cd03275 | 247 | ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC protein | 98.35 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.33 | |
| cd00267 | 157 | ABC_ATPase ABC (ATP-binding cassette) transporter | 98.31 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 98.3 | |
| cd03273 | 251 | ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC protein | 98.28 | |
| cd03241 | 276 | ABC_RecN RecN ATPase involved in DNA repair; ABC ( | 98.26 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.26 | |
| COG3840 | 231 | ThiQ ABC-type thiamine transport system, ATPase co | 98.25 | |
| COG1121 | 254 | ZnuC ABC-type Mn/Zn transport systems, ATPase comp | 98.25 | |
| cd03227 | 162 | ABC_Class2 ABC-type Class 2 contains systems invol | 98.25 | |
| PRK00064 | 361 | recF recombination protein F; Reviewed | 98.24 | |
| COG4604 | 252 | CeuD ABC-type enterochelin transport system, ATPas | 98.23 | |
| COG4987 | 573 | CydC ABC-type transport system involved in cytochr | 98.21 | |
| cd03240 | 204 | ABC_Rad50 The catalytic domains of Rad50 are simil | 98.2 | |
| cd03272 | 243 | ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC protein | 98.2 | |
| COG1122 | 235 | CbiO ABC-type cobalt transport system, ATPase comp | 98.2 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 98.2 | |
| PF13558 | 90 | SbcCD_C: Putative exonuclease SbcCD, C subunit; PD | 98.19 | |
| cd03231 | 201 | ABC_CcmA_heme_exporter CcmA, the ATP-binding compo | 98.18 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.17 | |
| cd03235 | 213 | ABC_Metallic_Cations ABC component of the metal-ty | 98.17 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 98.16 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 98.16 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 98.16 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 98.15 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 98.15 | |
| cd03274 | 212 | ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC protein | 98.15 | |
| COG4988 | 559 | CydD ABC-type transport system involved in cytochr | 98.15 | |
| cd03268 | 208 | ABC_BcrA_bacitracin_resist The BcrA subfamily repr | 98.14 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 98.13 | |
| COG4674 | 249 | Uncharacterized ABC-type transport system, ATPase | 98.13 | |
| cd03230 | 173 | ABC_DR_subfamily_A This family of ATP-binding prot | 98.13 | |
| COG1136 | 226 | SalX ABC-type antimicrobial peptide transport syst | 98.13 | |
| COG0396 | 251 | sufC Cysteine desulfurase activator ATPase [Posttr | 98.12 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 98.12 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 98.11 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 98.11 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 98.1 | |
| COG4559 | 259 | ABC-type hemin transport system, ATPase component | 98.1 | |
| cd03269 | 210 | ABC_putative_ATPase This subfamily is involved in | 98.1 | |
| COG4938 | 374 | Uncharacterized conserved protein [Function unknow | 98.09 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 98.09 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 98.08 | |
| cd03220 | 224 | ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transpo | 98.07 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 98.07 | |
| cd03237 | 246 | ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o | 98.07 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 98.06 | |
| TIGR02211 | 221 | LolD_lipo_ex lipoprotein releasing system, ATP-bin | 98.06 | |
| cd03246 | 173 | ABCC_Protease_Secretion This family represents the | 98.06 | |
| cd03216 | 163 | ABC_Carb_Monos_I This family represents the domain | 98.06 | |
| cd03226 | 205 | ABC_cobalt_CbiO_domain2 Domain II of the ABC compo | 98.06 | |
| PRK13539 | 207 | cytochrome c biogenesis protein CcmA; Provisional | 98.05 | |
| COG1120 | 258 | FepC ABC-type cobalamin/Fe3+-siderophores transpor | 98.05 | |
| PRK14079 | 349 | recF recombination protein F; Provisional | 98.04 | |
| TIGR01189 | 198 | ccmA heme ABC exporter, ATP-binding protein CcmA. | 98.04 | |
| cd03232 | 192 | ABC_PDR_domain2 The pleiotropic drug resistance-li | 98.04 | |
| cd03266 | 218 | ABC_NatA_sodium_exporter NatA is the ATPase compon | 98.04 | |
| PRK11247 | 257 | ssuB aliphatic sulfonates transport ATP-binding su | 98.03 | |
| TIGR01184 | 230 | ntrCD nitrate transport ATP-binding subunits C and | 98.03 | |
| cd03264 | 211 | ABC_drug_resistance_like ABC-type multidrug transp | 98.03 | |
| cd03214 | 180 | ABC_Iron-Siderophores_B12_Hemin ABC transporters, | 98.03 | |
| cd03262 | 213 | ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- | 98.02 | |
| PRK11629 | 233 | lolD lipoprotein transporter ATP-binding subunit; | 98.02 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 98.02 | |
| PRK13543 | 214 | cytochrome c biogenesis protein CcmA; Provisional | 98.02 | |
| cd03245 | 220 | ABCC_bacteriocin_exporters ABC-type bacteriocin ex | 98.02 | |
| cd03263 | 220 | ABC_subfamily_A The ABCA subfamily mediates the tr | 98.01 | |
| cd03215 | 182 | ABC_Carb_Monos_II This family represents domain II | 98.01 | |
| PRK13538 | 204 | cytochrome c biogenesis protein CcmA; Provisional | 98.01 | |
| PRK13540 | 200 | cytochrome c biogenesis protein CcmA; Provisional | 98.01 | |
| cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleot | 98.0 | |
| PRK10619 | 257 | histidine/lysine/arginine/ornithine transporter su | 98.0 | |
| TIGR01277 | 213 | thiQ thiamine ABC transporter, ATP-binding protein | 98.0 | |
| cd03261 | 235 | ABC_Org_Solvent_Resistant ABC (ATP-binding cassett | 98.0 | |
| PRK14245 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 98.0 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 97.99 | |
| cd03224 | 222 | ABC_TM1139_LivF_branched LivF (TM1139) is part of | 97.99 | |
| cd03256 | 241 | ABC_PhnC_transporter ABC-type phosphate/phosphonat | 97.99 | |
| cd03213 | 194 | ABCG_EPDR ABCG transporters are involved in eye pi | 97.99 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 97.99 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 97.98 | |
| cd03238 | 176 | ABC_UvrA The excision repair protein UvrA; Nucleot | 97.98 | |
| cd03219 | 236 | ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans | 97.98 | |
| PRK10584 | 228 | putative ABC transporter ATP-binding protein YbbA; | 97.98 | |
| PRK11264 | 250 | putative amino-acid ABC transporter ATP-binding pr | 97.98 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 97.97 | |
| PRK11614 | 237 | livF leucine/isoleucine/valine transporter ATP-bin | 97.97 | |
| cd03265 | 220 | ABC_DrrA DrrA is the ATP-binding protein component | 97.97 | |
| cd03222 | 177 | ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi | 97.97 | |
| PRK14268 | 258 | phosphate ABC transporter ATP-binding protein; Pro | 97.97 | |
| COG4694 | 758 | Uncharacterized protein conserved in bacteria [Fun | 97.97 | |
| PRK10908 | 222 | cell division protein FtsE; Provisional | 97.97 | |
| cd03297 | 214 | ABC_ModC_molybdenum_transporter ModC is an ABC-typ | 97.97 | |
| TIGR03771 | 223 | anch_rpt_ABC anchored repeat-type ABC transporter, | 97.97 | |
| PRK14269 | 246 | phosphate ABC transporter ATP-binding protein; Pro | 97.97 | |
| TIGR03864 | 236 | PQQ_ABC_ATP ABC transporter, ATP-binding subunit, | 97.97 | |
| cd03218 | 232 | ABC_YhbG The ABC transporters belonging to the Yhb | 97.96 | |
| PRK14247 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.96 | |
| cd03248 | 226 | ABCC_TAP TAP, the Transporter Associated with Anti | 97.96 | |
| PRK11248 | 255 | tauB taurine transporter ATP-binding subunit; Prov | 97.96 | |
| PRK14270 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.96 | |
| cd03298 | 211 | ABC_ThiQ_thiamine_transporter ABC-type thiamine tr | 97.96 | |
| cd03233 | 202 | ABC_PDR_domain1 The pleiotropic drug resistance (P | 97.96 | |
| cd03217 | 200 | ABC_FeS_Assembly ABC-type transport system involve | 97.96 | |
| PRK14242 | 253 | phosphate transporter ATP-binding protein; Provisi | 97.96 | |
| TIGR03740 | 223 | galliderm_ABC gallidermin-class lantibiotic protec | 97.96 | |
| TIGR00972 | 247 | 3a0107s01c2 phosphate ABC transporter, ATP-binding | 97.95 | |
| TIGR01188 | 302 | drrA daunorubicin resistance ABC transporter ATP-b | 97.95 | |
| PRK09493 | 240 | glnQ glutamine ABC transporter ATP-binding protein | 97.95 | |
| PRK10771 | 232 | thiQ thiamine transporter ATP-binding subunit; Pro | 97.95 | |
| cd03228 | 171 | ABCC_MRP_Like The MRP (Mutidrug Resistance Protein | 97.95 | |
| PRK14241 | 258 | phosphate transporter ATP-binding protein; Provisi | 97.95 | |
| cd03223 | 166 | ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass | 97.95 | |
| COG1131 | 293 | CcmA ABC-type multidrug transport system, ATPase c | 97.95 | |
| TIGR02315 | 243 | ABC_phnC phosphonate ABC transporter, ATP-binding | 97.94 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 97.94 | |
| cd03258 | 233 | ABC_MetN_methionine_transporter MetN (also known a | 97.94 | |
| COG4598 | 256 | HisP ABC-type histidine transport system, ATPase c | 97.94 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 97.94 | |
| PRK11124 | 242 | artP arginine transporter ATP-binding subunit; Pro | 97.94 | |
| PRK14259 | 269 | phosphate ABC transporter ATP-binding protein; Pro | 97.94 | |
| PRK14262 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.94 | |
| TIGR03411 | 242 | urea_trans_UrtD urea ABC transporter, ATP-binding | 97.93 | |
| cd03254 | 229 | ABCC_Glucan_exporter_like Glucan exporter ATP-bind | 97.93 | |
| PRK14273 | 254 | phosphate ABC transporter ATP-binding protein; Pro | 97.93 | |
| PRK11231 | 255 | fecE iron-dicitrate transporter ATP-binding subuni | 97.93 | |
| TIGR01978 | 243 | sufC FeS assembly ATPase SufC. SufC is part of the | 97.93 | |
| PRK13546 | 264 | teichoic acids export protein ATP-binding subunit; | 97.93 | |
| PRK13643 | 288 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.93 | |
| PRK13638 | 271 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.93 | |
| PRK11831 | 269 | putative ABC transporter ATP-binding protein YrbF; | 97.93 | |
| PRK14240 | 250 | phosphate transporter ATP-binding protein; Provisi | 97.93 | |
| PRK15056 | 272 | manganese/iron transporter ATP-binding protein; Pr | 97.92 | |
| TIGR02323 | 253 | CP_lyasePhnK phosphonate C-P lyase system protein | 97.92 | |
| PRK13631 | 320 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.92 | |
| cd03244 | 221 | ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. | 97.92 | |
| cd03249 | 238 | ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) | 97.92 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.92 | |
| TIGR01288 | 303 | nodI ATP-binding ABC transporter family nodulation | 97.92 | |
| COG1121 | 254 | ZnuC ABC-type Mn/Zn transport systems, ATPase comp | 97.92 | |
| TIGR02324 | 224 | CP_lyasePhnL phosphonate C-P lyase system protein | 97.92 | |
| cd03252 | 237 | ABCC_Hemolysin The ABC-transporter hemolysin B is | 97.92 | |
| PRK14274 | 259 | phosphate ABC transporter ATP-binding protein; Pro | 97.92 | |
| cd03257 | 228 | ABC_NikE_OppD_transporters The ABC transporter sub | 97.92 | |
| PRK13651 | 305 | cobalt transporter ATP-binding subunit; Provisiona | 97.91 | |
| PRK14239 | 252 | phosphate transporter ATP-binding protein; Provisi | 97.91 | |
| PRK14244 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.91 | |
| cd03267 | 236 | ABC_NatA_like Similar in sequence to NatA, this is | 97.91 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.91 | |
| TIGR02770 | 230 | nickel_nikD nickel import ATP-binding protein NikD | 97.91 | |
| cd03247 | 178 | ABCC_cytochrome_bd The CYD subfamily implicated in | 97.91 | |
| PRK13649 | 280 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.91 | |
| cd03251 | 234 | ABCC_MsbA MsbA is an essential ABC transporter, cl | 97.91 | |
| PRK10744 | 260 | pstB phosphate transporter ATP-binding protein; Pr | 97.91 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 97.9 | |
| cd03270 | 226 | ABC_UvrA_I The excision repair protein UvrA domain | 97.9 | |
| PRK14271 | 276 | phosphate ABC transporter ATP-binding protein; Pro | 97.9 | |
| COG1120 | 258 | FepC ABC-type cobalamin/Fe3+-siderophores transpor | 97.9 | |
| COG5293 | 591 | Predicted ATPase [General function prediction only | 97.9 | |
| PRK14250 | 241 | phosphate ABC transporter ATP-binding protein; Pro | 97.89 | |
| PRK13541 | 195 | cytochrome c biogenesis protein CcmA; Provisional | 97.89 | |
| TIGR01186 | 363 | proV glycine betaine/L-proline transport ATP bindi | 97.89 | |
| PRK14254 | 285 | phosphate ABC transporter ATP-binding protein; Pro | 97.89 | |
| PRK09580 | 248 | sufC cysteine desulfurase ATPase component; Review | 97.89 | |
| PRK14238 | 271 | phosphate transporter ATP-binding protein; Provisi | 97.89 | |
| PRK15112 | 267 | antimicrobial peptide ABC system ATP-binding prote | 97.88 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 97.88 | |
| PRK14255 | 252 | phosphate ABC transporter ATP-binding protein; Pro | 97.88 | |
| PRK13545 | 549 | tagH teichoic acids export protein ATP-binding sub | 97.88 | |
| cd03294 | 269 | ABC_Pro_Gly_Bertaine This family comprises the gly | 97.88 | |
| cd03301 | 213 | ABC_MalK_N The N-terminal ATPase domain of the mal | 97.87 | |
| PRK14272 | 252 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| PRK14235 | 267 | phosphate transporter ATP-binding protein; Provisi | 97.87 | |
| PRK10575 | 265 | iron-hydroxamate transporter ATP-binding subunit; | 97.87 | |
| PRK14248 | 268 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| TIGR01187 | 325 | potA spermidine/putrescine ABC transporter ATP-bin | 97.87 | |
| cd03221 | 144 | ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is | 97.87 | |
| PRK14253 | 249 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| PRK10247 | 225 | putative ABC transporter ATP-binding protein YbbL; | 97.87 | |
| PRK09544 | 251 | znuC high-affinity zinc transporter ATPase; Review | 97.87 | |
| PRK14261 | 253 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| TIGR03410 | 230 | urea_trans_UrtE urea ABC transporter, ATP-binding | 97.86 | |
| PRK14275 | 286 | phosphate ABC transporter ATP-binding protein; Pro | 97.86 | |
| cd03234 | 226 | ABCG_White The White subfamily represents ABC tran | 97.86 | |
| cd03295 | 242 | ABC_OpuCA_Osmoprotection OpuCA is a the ATP bindin | 97.86 | |
| TIGR02314 | 343 | ABC_MetN D-methionine ABC transporter, ATP-binding | 97.86 | |
| PRK13548 | 258 | hmuV hemin importer ATP-binding subunit; Provision | 97.86 | |
| PRK14267 | 253 | phosphate ABC transporter ATP-binding protein; Pro | 97.86 | |
| PRK14265 | 274 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| PRK14264 | 305 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| PRK13637 | 287 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.85 | |
| PRK11153 | 343 | metN DL-methionine transporter ATP-binding subunit | 97.85 | |
| PRK14266 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 97.85 | |
| cd03369 | 207 | ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-ty | 97.85 | |
| PRK14263 | 261 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| CHL00131 | 252 | ycf16 sulfate ABC transporter protein; Validated | 97.85 | |
| PRK13639 | 275 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.84 | |
| cd03253 | 236 | ABCC_ATM1_transporter ATM1 is an ABC transporter t | 97.84 | |
| PRK14243 | 264 | phosphate transporter ATP-binding protein; Provisi | 97.84 | |
| TIGR03005 | 252 | ectoine_ehuA ectoine/hydroxyectoine ABC transporte | 97.84 | |
| PRK14258 | 261 | phosphate ABC transporter ATP-binding protein; Pro | 97.84 | |
| COG4525 | 259 | TauB ABC-type taurine transport system, ATPase com | 97.84 | |
| PRK13645 | 289 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.84 | |
| PRK10895 | 241 | lipopolysaccharide ABC transporter ATP-binding pro | 97.84 | |
| PRK10070 | 400 | glycine betaine transporter ATP-binding subunit; P | 97.83 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 97.83 | |
| PRK11650 | 356 | ugpC glycerol-3-phosphate transporter ATP-binding | 97.83 | |
| TIGR03873 | 256 | F420-0_ABC_ATP proposed F420-0 ABC transporter, AT | 97.83 | |
| PRK13641 | 287 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.83 | |
| PRK13646 | 286 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.83 | |
| PRK13647 | 274 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.82 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.82 | |
| PRK14251 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.82 | |
| PRK13632 | 271 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.81 | |
| PRK13536 | 340 | nodulation factor exporter subunit NodI; Provision | 97.81 | |
| PRK11300 | 255 | livG leucine/isoleucine/valine transporter ATP-bin | 97.81 | |
| PRK10418 | 254 | nikD nickel transporter ATP-binding protein NikD; | 97.81 | |
| COG4559 | 259 | ABC-type hemin transport system, ATPase component | 97.81 | |
| PRK15439 | 510 | autoinducer 2 ABC transporter ATP-binding protein | 97.81 | |
| PRK13648 | 269 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.8 | |
| PRK13536 | 340 | nodulation factor exporter subunit NodI; Provision | 97.8 | |
| PRK10253 | 265 | iron-enterobactin transporter ATP-binding protein; | 97.8 | |
| PRK14260 | 259 | phosphate ABC transporter ATP-binding protein; Pro | 97.8 | |
| PRK11701 | 258 | phnK phosphonate C-P lyase system protein PhnK; Pr | 97.8 | |
| PRK03695 | 248 | vitamin B12-transporter ATPase; Provisional | 97.8 | |
| COG1116 | 248 | TauB ABC-type nitrate/sulfonate/bicarbonate transp | 97.8 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 97.79 | |
| PRK14256 | 252 | phosphate ABC transporter ATP-binding protein; Pro | 97.79 | |
| PRK14236 | 272 | phosphate transporter ATP-binding protein; Provisi | 97.79 | |
| PRK13409 | 590 | putative ATPase RIL; Provisional | 97.79 | |
| PRK13537 | 306 | nodulation ABC transporter NodI; Provisional | 97.79 | |
| PRK14237 | 267 | phosphate transporter ATP-binding protein; Provisi | 97.79 | |
| COG4133 | 209 | CcmA ABC-type transport system involved in cytochr | 97.78 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.78 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 97.78 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 97.78 | |
| PRK13634 | 290 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.78 | |
| PRK13644 | 274 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.78 | |
| TIGR03258 | 362 | PhnT 2-aminoethylphosphonate ABC transport system, | 97.78 | |
| PRK14252 | 265 | phosphate ABC transporter ATP-binding protein; Pro | 97.77 | |
| TIGR03269 | 520 | met_CoM_red_A2 methyl coenzyme M reductase system, | 97.77 | |
| TIGR02633 | 500 | xylG D-xylose ABC transporter, ATP-binding protein | 97.77 | |
| PRK10419 | 268 | nikE nickel transporter ATP-binding protein NikE; | 97.77 | |
| cd03271 | 261 | ABC_UvrA_II The excision repair protein UvrA domai | 97.77 | |
| PRK09452 | 375 | potA putrescine/spermidine ABC transporter ATPase | 97.77 | |
| PRK11000 | 369 | maltose/maltodextrin transporter ATP-binding prote | 97.77 | |
| cd03300 | 232 | ABC_PotA_N PotA is an ABC-type transporter and the | 97.77 | |
| PRK10938 | 490 | putative molybdenum transport ATP-binding protein | 97.77 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.76 | |
| PRK13650 | 279 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.76 | |
| cd03279 | 213 | ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complex | 97.76 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 97.76 | |
| TIGR02142 | 354 | modC_ABC molybdenum ABC transporter, ATP-binding p | 97.75 | |
| PRK14249 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.75 | |
| PRK13642 | 277 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.75 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.74 | |
| PRK13547 | 272 | hmuV hemin importer ATP-binding subunit; Provision | 97.74 | |
| PRK10762 | 501 | D-ribose transporter ATP binding protein; Provisio | 97.74 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 97.74 | |
| KOG0057 | 591 | consensus Mitochondrial Fe/S cluster exporter, ABC | 97.74 | |
| PRK09984 | 262 | phosphonate/organophosphate ester transporter subu | 97.73 | |
| PRK11144 | 352 | modC molybdate transporter ATP-binding protein; Pr | 97.73 | |
| COG1117 | 253 | PstB ABC-type phosphate transport system, ATPase c | 97.73 | |
| PRK09700 | 510 | D-allose transporter ATP-binding protein; Provisio | 97.73 | |
| TIGR02769 | 265 | nickel_nikE nickel import ATP-binding protein NikE | 97.72 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.72 | |
| cd03238 | 176 | ABC_UvrA The excision repair protein UvrA; Nucleot | 97.72 | |
| PF06470 | 120 | SMC_hinge: SMC proteins Flexible Hinge Domain; Int | 97.72 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 97.72 | |
| PRK11174 | 588 | cysteine/glutathione ABC transporter membrane/ATP- | 97.72 | |
| PRK13633 | 280 | cobalt transporter ATP-binding subunit; Provisiona | 97.71 | |
| PRK10938 | 490 | putative molybdenum transport ATP-binding protein | 97.71 | |
| PRK15134 | 529 | microcin C ABC transporter ATP-binding protein Yej | 97.71 | |
| COG1119 | 257 | ModF ABC-type molybdenum transport system, ATPase | 97.71 | |
| PRK13635 | 279 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.71 | |
| PRK14257 | 329 | phosphate ABC transporter ATP-binding protein; Pro | 97.7 | |
| PRK10982 | 491 | galactose/methyl galaxtoside transporter ATP-bindi | 97.7 | |
| PRK10851 | 353 | sulfate/thiosulfate transporter subunit; Provision | 97.7 | |
| COG1127 | 263 | Ttg2A ABC-type transport system involved in resist | 97.7 | |
| PRK13549 | 506 | xylose transporter ATP-binding subunit; Provisiona | 97.7 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 97.7 | |
| PRK13636 | 283 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.7 | |
| cd03299 | 235 | ABC_ModC_like Archeal protein closely related to M | 97.7 | |
| cd03291 | 282 | ABCC_CFTR1 The CFTR subfamily domain 1. The cystic | 97.69 | |
| PRK13640 | 282 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.69 | |
| cd03236 | 255 | ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 o | 97.69 | |
| TIGR02203 | 571 | MsbA_lipidA lipid A export permease/ATP-binding pr | 97.69 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 97.69 | |
| TIGR02633 | 500 | xylG D-xylose ABC transporter, ATP-binding protein | 97.69 | |
| TIGR00968 | 237 | 3a0106s01 sulfate ABC transporter, ATP-binding pro | 97.68 | |
| PRK15134 | 529 | microcin C ABC transporter ATP-binding protein Yej | 97.68 | |
| PRK14246 | 257 | phosphate ABC transporter ATP-binding protein; Pro | 97.68 | |
| PRK10982 | 491 | galactose/methyl galaxtoside transporter ATP-bindi | 97.68 | |
| COG1135 | 339 | AbcC ABC-type metal ion transport system, ATPase c | 97.68 | |
| COG4181 | 228 | Predicted ABC-type transport system involved in ly | 97.68 | |
| PRK11288 | 501 | araG L-arabinose transporter ATP-binding protein; | 97.68 | |
| PRK11288 | 501 | araG L-arabinose transporter ATP-binding protein; | 97.67 | |
| cd03221 | 144 | ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is | 97.67 | |
| cd03250 | 204 | ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. | 97.66 | |
| TIGR03522 | 301 | GldA_ABC_ATP gliding motility-associated ABC trans | 97.65 | |
| COG4175 | 386 | ProV ABC-type proline/glycine betaine transport sy | 97.65 | |
| PRK11432 | 351 | fbpC ferric transporter ATP-binding subunit; Provi | 97.65 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 97.65 | |
| TIGR03415 | 382 | ABC_choXWV_ATP choline ABC transporter, ATP-bindin | 97.65 | |
| cd03215 | 182 | ABC_Carb_Monos_II This family represents domain II | 97.65 | |
| PRK13652 | 277 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.65 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 97.64 | |
| PRK15439 | 510 | autoinducer 2 ABC transporter ATP-binding protein | 97.64 | |
| PRK13549 | 506 | xylose transporter ATP-binding subunit; Provisiona | 97.64 | |
| TIGR02982 | 220 | heterocyst_DevA ABC exporter ATP-binding subunit, | 97.64 | |
| COG1119 | 257 | ModF ABC-type molybdenum transport system, ATPase | 97.63 | |
| cd03264 | 211 | ABC_drug_resistance_like ABC-type multidrug transp | 97.63 | |
| TIGR03269 | 520 | met_CoM_red_A2 methyl coenzyme M reductase system, | 97.63 | |
| PRK13538 | 204 | cytochrome c biogenesis protein CcmA; Provisional | 97.63 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 97.63 | |
| PRK13631 | 320 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.63 | |
| PRK14247 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.62 | |
| PRK13409 | 590 | putative ATPase RIL; Provisional | 97.62 | |
| cd03288 | 257 | ABCC_SUR2 The SUR domain 2. The sulfonylurea recep | 97.62 | |
| TIGR03719 | 552 | ABC_ABC_ChvD ATP-binding cassette protein, ChvD fa | 97.62 | |
| PRK10261 | 623 | glutathione transporter ATP-binding protein; Provi | 97.62 | |
| COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, c | 97.62 | |
| TIGR03265 | 353 | PhnT2 putative 2-aminoethylphosphonate ABC transpo | 97.62 | |
| PRK13539 | 207 | cytochrome c biogenesis protein CcmA; Provisional | 97.62 | |
| cd00267 | 157 | ABC_ATPase ABC (ATP-binding cassette) transporter | 97.61 | |
| cd03290 | 218 | ABCC_SUR1_N The SUR domain 1. The sulfonylurea rec | 97.61 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 97.61 | |
| PRK09536 | 402 | btuD corrinoid ABC transporter ATPase; Reviewed | 97.61 | |
| PRK09700 | 510 | D-allose transporter ATP-binding protein; Provisio | 97.61 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 97.61 | |
| cd03289 | 275 | ABCC_CFTR2 The CFTR subfamily domain 2. The cystic | 97.6 | |
| PRK13657 | 588 | cyclic beta-1,2-glucan ABC transporter; Provisiona | 97.6 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 97.6 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 97.6 | |
| TIGR02315 | 243 | ABC_phnC phosphonate ABC transporter, ATP-binding | 97.6 | |
| TIGR00630 | 924 | uvra excinuclease ABC, A subunit. This family is b | 97.59 | |
| cd03262 | 213 | ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- | 97.59 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 97.59 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 97.59 | |
| COG1137 | 243 | YhbG ABC-type (unclassified) transport system, ATP | 97.59 | |
| PRK10789 | 569 | putative multidrug transporter membrane\ATP-bindin | 97.58 | |
| PRK10636 | 638 | putative ABC transporter ATP-binding protein; Prov | 97.58 | |
| PRK11176 | 582 | lipid transporter ATP-binding/permease protein; Pr | 97.58 | |
| COG1101 | 263 | PhnK ABC-type uncharacterized transport system, AT | 97.57 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 97.57 | |
| PRK11248 | 255 | tauB taurine transporter ATP-binding subunit; Prov | 97.57 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 97.57 | |
| PRK10762 | 501 | D-ribose transporter ATP binding protein; Provisio | 97.57 | |
| PRK11607 | 377 | potG putrescine transporter ATP-binding subunit; P | 97.57 | |
| PRK10261 | 623 | glutathione transporter ATP-binding protein; Provi | 97.56 | |
| COG1132 | 567 | MdlB ABC-type multidrug transport system, ATPase a | 97.56 | |
| TIGR03375 | 694 | type_I_sec_LssB type I secretion system ATPase, Ls | 97.56 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 97.56 | |
| PRK14262 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.55 | |
| PRK11264 | 250 | putative amino-acid ABC transporter ATP-binding pr | 97.55 | |
| cd03224 | 222 | ABC_TM1139_LivF_branched LivF (TM1139) is part of | 97.54 | |
| PRK13638 | 271 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.54 | |
| PRK14261 | 253 | phosphate ABC transporter ATP-binding protein; Pro | 97.54 | |
| PRK14266 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.54 | |
| PRK14242 | 253 | phosphate transporter ATP-binding protein; Provisi | 97.54 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 97.54 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 97.53 | |
| COG3839 | 338 | MalK ABC-type sugar transport systems, ATPase comp | 97.53 | |
| cd03269 | 210 | ABC_putative_ATPase This subfamily is involved in | 97.53 | |
| COG0411 | 250 | LivG ABC-type branched-chain amino acid transport | 97.53 | |
| PRK13648 | 269 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.52 | |
| cd03265 | 220 | ABC_DrrA DrrA is the ATP-binding protein component | 97.52 | |
| TIGR01192 | 585 | chvA glucan exporter ATP-binding protein. This mod | 97.52 | |
| PRK10790 | 592 | putative multidrug transporter membrane\ATP-bindin | 97.52 | |
| cd03219 | 236 | ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans | 97.52 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 97.52 | |
| PRK11160 | 574 | cysteine/glutathione ABC transporter membrane/ATP- | 97.52 | |
| PRK11247 | 257 | ssuB aliphatic sulfonates transport ATP-binding su | 97.52 | |
| cd03263 | 220 | ABC_subfamily_A The ABCA subfamily mediates the tr | 97.51 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 97.51 | |
| PRK13540 | 200 | cytochrome c biogenesis protein CcmA; Provisional | 97.51 | |
| PRK14250 | 241 | phosphate ABC transporter ATP-binding protein; Pro | 97.51 | |
| cd03226 | 205 | ABC_cobalt_CbiO_domain2 Domain II of the ABC compo | 97.51 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 97.5 | |
| PRK13541 | 195 | cytochrome c biogenesis protein CcmA; Provisional | 97.5 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 97.49 | |
| cd03256 | 241 | ABC_PhnC_transporter ABC-type phosphate/phosphonat | 97.49 | |
| cd03261 | 235 | ABC_Org_Solvent_Resistant ABC (ATP-binding cassett | 97.49 | |
| cd03268 | 208 | ABC_BcrA_bacitracin_resist The BcrA subfamily repr | 97.49 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 97.49 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 97.48 | |
| PRK13537 | 306 | nodulation ABC transporter NodI; Provisional | 97.48 | |
| PRK14253 | 249 | phosphate ABC transporter ATP-binding protein; Pro | 97.48 | |
| TIGR01842 | 544 | type_I_sec_PrtD type I secretion system ABC transp | 97.48 | |
| cd03223 | 166 | ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass | 97.48 | |
| cd03230 | 173 | ABC_DR_subfamily_A This family of ATP-binding prot | 97.48 | |
| PRK14273 | 254 | phosphate ABC transporter ATP-binding protein; Pro | 97.48 | |
| PRK11231 | 255 | fecE iron-dicitrate transporter ATP-binding subuni | 97.48 | |
| TIGR02211 | 221 | LolD_lipo_ex lipoprotein releasing system, ATP-bin | 97.48 | |
| cd03248 | 226 | ABCC_TAP TAP, the Transporter Associated with Anti | 97.48 | |
| PRK11629 | 233 | lolD lipoprotein transporter ATP-binding subunit; | 97.48 | |
| PRK09493 | 240 | glnQ glutamine ABC transporter ATP-binding protein | 97.48 | |
| TIGR03864 | 236 | PQQ_ABC_ATP ABC transporter, ATP-binding subunit, | 97.48 | |
| PRK14236 | 272 | phosphate transporter ATP-binding protein; Provisi | 97.48 | |
| PRK14274 | 259 | phosphate ABC transporter ATP-binding protein; Pro | 97.47 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 97.47 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 97.47 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 97.47 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 97.47 | |
| TIGR01978 | 243 | sufC FeS assembly ATPase SufC. SufC is part of the | 97.47 | |
| cd03242 | 270 | ABC_RecF RecF is a recombinational DNA repair ATPa | 97.47 | |
| PRK14259 | 269 | phosphate ABC transporter ATP-binding protein; Pro | 97.47 | |
| cd03216 | 163 | ABC_Carb_Monos_I This family represents the domain | 97.46 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 97.46 |
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-118 Score=960.92 Aligned_cols=1022 Identities=35% Similarity=0.538 Sum_probs=767.2
Q ss_pred cccccCCCCCCCCCceEEEEEEeccccccceEEecCCceeEEEcCCCCChHHHHHHHHHHhcCCCccccccccccccccc
Q 001573 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKR 86 (1051)
Q Consensus 7 ~~~~~~~~~~~~~~~~i~~l~l~nf~~~~~~~i~f~~~~~~I~G~NGsGKSti~~Ai~~~L~g~~~~~~r~~~~~~~i~~ 86 (1051)
+.++....-++|++|.|.+|+|+||.+|..+++.|+|.+|+|+||||||||||+||||+||||.|...|||.++.+||++
T Consensus 6 ~~~~l~~~~~sf~~GsIvrI~l~NF~Ty~~~e~~pgpsLNmIiGpNGSGKSSiVcAIcLglgG~Pk~lGRak~VgeyIK~ 85 (1072)
T KOG0979|consen 6 SDPALPLNYSSFPDGSIVRIELHNFLTYDHTEFLPGPSLNMIIGPNGSGKSSIVCAICLGLGGKPKLLGRAKKVGEYIKR 85 (1072)
T ss_pred cccccCCCcccCCCCceEEEEEeeeeeeeeeeecCCCceeeEECCCCCCchHHHHHHHHHcCCChhhccchhHHHHHHhc
Confidence 34444444577999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEEEEecCCCceEEEEEEEecCCcceEEECCeeecHHHHHHHHHHcCccccccccccccchHHHHhccCchHH
Q 001573 87 GEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKL 166 (1051)
Q Consensus 87 g~~~a~v~i~~~~~~~~~~~~i~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~Q~~~~~~~~~~~~~~ 166 (1051)
|++.+.|+|++.+ .+..++|+|.|.+++.|.|+|||..++.+++.++...|+|+++|+|+||||++|.+|+..+|..+
T Consensus 86 G~~~g~IEI~l~~--~~e~~~ItR~I~~~k~S~y~iN~~a~t~s~i~elv~~fNIQi~NLCqFLpQDkV~EFa~L~pi~L 163 (1072)
T KOG0979|consen 86 GEDEGYIEIELKD--KDETLTITRLISRDKESKYFINDSATTKSEIEELVAHFNIQIDNLCQFLPQDKVKEFARLSPIEL 163 (1072)
T ss_pred CCccceEEEEEec--CCCceEEEEEEeecCCcceeeccchhhhHHHHHHHHHHhcccCchhhhccHHHHHHHHcCChHHH
Confidence 9999999999995 58999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCcHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhch
Q 001573 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246 (1051)
Q Consensus 167 ~~~~~~~~g~~~l~~~~~~l~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 246 (1051)
+..++.++|.+.+...+.+|.++..+...++..+......+..++++++.+++.++.+.+......+++-+..+..|+.|
T Consensus 164 L~eTekAig~~~ll~~h~eL~~lr~~e~~Le~~~~~~~~~l~~L~~~~~~l~kdVE~~rer~~~~~~Ie~l~~k~~~v~y 243 (1072)
T KOG0979|consen 164 LVETEKAIGAEELLQYHIELMDLREDEKSLEDKLTTKTEKLNRLEDEIDKLEKDVERVRERERKKSKIELLEKKKKWVEY 243 (1072)
T ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhchHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001573 247 DMKKAEYIAAKEQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQVGVQVQGK 326 (1051)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (1051)
.....++...+.....++.++..+.+...++......++.+..+...++......+......+......+......+..+
T Consensus 244 ~~~~~ey~~~k~~~~r~k~~~r~l~k~~~pi~~~~eeLe~~~~et~~~~s~~~~~~~e~~~k~~~~~ek~~~~~~~v~~~ 323 (1072)
T KOG0979|consen 244 KKHDREYNAYKQAKDRAKKELRKLEKEIKPIEDKKEELESEKKETRSKISQKQRELNEALAKVQEKFEKLKEIEDEVEEK 323 (1072)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001573 327 YKEMQELRRQEQSRQQRILKAREELAAAELDLQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL 406 (1051)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (1051)
...++.++......+..+....+.+...+..+...+.......+.+++..++.+.......-..+..+.+.........+
T Consensus 324 ~~~le~lk~~~~~rq~~i~~~~k~i~~~q~el~~~~~~e~~~~~~~ei~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~l 403 (1072)
T KOG0979|consen 324 KNKLESLKKAAEKRQKRIEKAKKMILDAQAELQETEDPENPVEEDQEIMKEVLQKKSSKLRDSRQEIDAEQLKSQKLRDL 403 (1072)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchhHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888888888877777766665544333333333333333333344
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhccCcccHHHHHHHHHHhhcccCCcccccceeEEeeCCcchHHHHHhhhcccccceEEE
Q 001573 407 RQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486 (1051)
Q Consensus 407 ~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~i~~~~~~~~~~ie~~l~~~~~~~~~v 486 (1051)
.+....+........+..-.....+++++..++.|+++++..|...+|+|+...+.++++.++.++|+++|-+.+.+|+|
T Consensus 404 ~~~kr~~~~~~~~~~~k~~~~l~~~~~d~~dAy~wlrenr~~FK~~vyeP~~m~l~~k~~~~A~~lEn~v~~~~~~~Fi~ 483 (1072)
T KOG0979|consen 404 ENKKRKLKQNSDLNRQKRYRVLRQGSSDAYDAYQWLRENRSEFKDEVYEPPIMTLNVKNAEFAKYLENFVGFNDLKAFIC 483 (1072)
T ss_pred HHHHHHHHHHhhhhhhhHHHHhccCchHHHHHHHHHHHCHHHhcccccCCceEEEecCChHHHHHHHcccCccccceeee
Confidence 44555554444433322122222344889999999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHhhcCC--CCcceEeecCCCCC--CCCCCCChHHHHhcCcceeecccccCcHHHHHHHHhhhCCcccccCC
Q 001573 487 QDAGDRDFLAKNLKP--FDVPILNYVSNESS--RKEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGS 562 (1051)
Q Consensus 487 ~~~~~~~~l~~~l~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~l~~l~~~~~~~~~~l~~~~~~~~~~i~~ 562 (1051)
.+..|+..+...++. +++..+...+.+.. -..|...+..++..||.+++.+++.+|+++..+||...++|...|
T Consensus 484 ~~~eD~~lf~~~i~d~k~~vn~~~~~~~~~k~~d~~p~~sre~l~~lGF~gyls~f~~~p~~vm~~Lc~~~~ih~IPv-- 561 (1072)
T KOG0979|consen 484 CDSEDYLLFVKKIKDEKWRVNASEVIPREKKYADKIPAQSREELKRLGFEGYLSNFIEAPEPVMSYLCNVSKIHRIPV-- 561 (1072)
T ss_pred echHHHHHHHHHhhhcceeeeceeccccccccccCCCccCHHHHHhcChHHHhhhhhcCcHHHHHHHHHhcccccccc--
Confidence 999999999888776 33333322222211 111455566778899999999999999999999999999999544
Q ss_pred CcchhhhhHhhhcCcceEEeCCceEEEEeeccCC-------------cceeeeecccCCccccccCChhHHHHHHHHHHH
Q 001573 563 KETDQKADNVAKLGILDFWTPENHYRWSISRYGG-------------HVSASVEPVNQSRLLLCSVDGNEIERLRSKKKK 629 (1051)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------------~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 629 (1051)
...+....++.. ...+-+++|.+.+....||+ .+....+++....++.+... +......
T Consensus 562 s~~~~~e~~~~~--~~~~r~~~~~~~~~~~i~g~~~~~i~~S~ygs~~v~~~~~~lk~~~f~~~~~~------l~~~~~~ 633 (1072)
T KOG0979|consen 562 SKREVEEAIVEV--LQNIRQPNGSVFLKRNIAGGRSKSIKKSAYGSRQVITRNDPLKSRNFFSVSPV------LEELDNR 633 (1072)
T ss_pred CcccccHHHHHH--HhccccCCCchhHHHHhhcCchhhhhhhccccceeeecCCcchhhhhhccchH------HHHHHHH
Confidence 443333222221 11333444443333333332 12222222222233333321 1111222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccHHHHHHHHHH
Q 001573 630 LEESVDELEESLKSMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVD 708 (1051)
Q Consensus 630 l~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~l~~~i~~~~~~l~~l~~~-~~~~~~~~~l~~ 708 (1051)
.++.+..+..+++.....++.++.+.+.....+......+..+......+...+...+.....++.. ..+...-+++..
T Consensus 634 ~ee~~~~~~~~~~~~~~~~r~lee~~~k~~k~le~~~~~~~~~~~er~~~~~~~~~~~~r~~~ie~~~~~l~~qkee~~~ 713 (1072)
T KOG0979|consen 634 IEEEIQKLKAEIDIRSSTLRELEEKKQKERKELEEEQKKLKLLKRERTKLNSELKSYQQRKERIENLVVDLDRQEEEYAA 713 (1072)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333333333333333333333333333333333333333333333333222222222222211 000000000100
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001573 709 ----QAADLNIQQFKYAIEIKNLLVEIVS-------CKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777 (1051)
Q Consensus 709 ----~~~~l~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~~ 777 (1051)
.+..............-++...+.. ....+.......-+++..+...+..+..+......++..+....
T Consensus 714 ~~~~~I~~~~~~~~~~~~~~~~~~~k~~e~~i~~~~~~~~~~~s~~~~iea~~~i~~~e~~i~~~~~~~~~lk~a~~~~k 793 (1072)
T KOG0979|consen 714 SEAKKILDTEDMRIQSIRWHLELTDKHKEIGIKEKNESSYMARSNKNNIEAERKIEKLEDNISFLEAREDLLKTALEDKK 793 (1072)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 0111111110000000000000000 00000111111112222223333333333333333333333322
Q ss_pred HHHHHHH--HHHHHHHHHHHHhhcCC----HHHHHHHhccCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHH
Q 001573 778 KEVEHCR--KHLSDAKRQAESIAFIT----PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIE 851 (1051)
Q Consensus 778 ~~~~~~~--~~l~~~~~~~~~~~~~~----~e~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (1051)
....... ..+.............. ..+..++.+.|.+..++...|..-......+..+|..+.++|+....++.
T Consensus 794 ~~a~~~~~~~~~~t~~~~~~s~~~~~~ek~~~~~~e~~e~p~t~~eld~~I~~e~t~~~~~~n~ne~~vq~y~~r~~el~ 873 (1072)
T KOG0979|consen 794 KEAAEKRKEQSLQTLKREIMSPATNKIEKSLVLMKELAEEPTTMDELDQAITDELTRALKFENVNEDAVQQYEVREDELR 873 (1072)
T ss_pred HHHHhcccchhHHHhhhccccccccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 2222222 11111111111111111 12456778889999999999988888776777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCcceEEEEeccCCcccccceEEEEEecCCCc
Q 001573 852 DLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ 931 (1051)
Q Consensus 852 ~l~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~~~~~i~~~F~~~f~~l~~~g~~~l~~~~~~~~~~gl~i~v~~~~~~~ 931 (1051)
.+...+......+..+.+.+....+.|.+.+.+++..|+.+|+.+|+.+|+.|++.|++++.|++.|||.|+|+|+++++
T Consensus 874 ~l~~~~~~~~~~le~i~~kl~~~ke~w~~~le~~V~~In~~Fs~~F~~mg~aGeV~L~~~~~DydkwgI~ImVkFR~s~~ 953 (1072)
T KOG0979|consen 874 ELETKLEKLSEDLERIKDKLSDVKEVWLPKLEEMVEQINERFSQLFSSMGCAGEVSLEVNPLDYDKWGIMIMVKFRDSEG 953 (1072)
T ss_pred HHHhhhhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEeccCcccHhHhceEEEEEEccCcc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred cccccccccCCchHHHHHHHHHHHhcccCCCCceEeeccccCCChHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 001573 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEY 1011 (1051)
Q Consensus 932 ~~~~~~~~lSGGErs~~~lalllal~~~~~~Pf~vlDEid~~lD~~n~~~~~~~l~~~~~~~~~~Q~i~iTp~~l~~~~~ 1011 (1051)
++.|+.+.+||||||++|+.||+|||.++||||+|+|||++||||.|.+.||+.|+..+|..+++|||+|||++|++|+|
T Consensus 954 L~~L~sh~QSGGERSVSTiLYLlALQ~l~~~PFRvVDEINQGMDp~NER~Vh~~mV~~ac~entsQyFliTPKLLpgL~Y 1033 (1072)
T KOG0979|consen 954 LKVLDSHRQSGGERSVSTILYLLALQELTPAPFRVVDEINQGMDPRNERKVHDIMVNMACKENTSQYFLITPKLLPGLDY 1033 (1072)
T ss_pred cccccccccCCcchHHHHHHHHHHHhhccCCCeeehhhhhcCCCchhHHHHHHHHHHHhhcCCCcceEEecchhcCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCeEEEEEecCCCCCCCCCCCChhhhHh
Q 001573 1012 SEACSILNIMNGPWIEQPSKVWSSGECWG 1040 (1051)
Q Consensus 1012 ~~~~~v~~~~~g~~~~~~~~~~~~~~~~~ 1040 (1051)
+..|+|+|+|||||+|.|++.|.++.+++
T Consensus 1034 senm~Il~v~ng~~~~~p~~~~~~~~f~~ 1062 (1072)
T KOG0979|consen 1034 SENMKILCVMNGPWIAEPSHTWTSAKFDA 1062 (1072)
T ss_pred hhcceEEEEecCCcCCCCccCchHHHHHH
Confidence 99999999999999999999999999886
|
|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK10246 exonuclease subunit SbcC; Provisional | Back alignment and domain information |
|---|
| >TIGR00618 sbcc exonuclease SbcC | Back alignment and domain information |
|---|
| >COG4717 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF02463 SMC_N: RecF/RecN/SMC N terminal domain; InterPro: IPR003395 This domain is found at the N terminus of structural maintenance of chromosomes (SMC) proteins, which function together with other proteins in a range of chromosomal transactions, including chromosome condensation, sister-chromatid cohesion, recombination, DNA repair and epigenetic silencing of gene expression [] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >COG4913 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd03273 ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03275 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >cd03242 ABC_RecF RecF is a recombinational DNA repair ATPase that maintains replication in the presence of DNA damage | Back alignment and domain information |
|---|
| >PRK00064 recF recombination protein F; Reviewed | Back alignment and domain information |
|---|
| >cd03241 ABC_RecN RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >PRK14079 recF recombination protein F; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >cd03277 ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >cd03272 ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >COG1195 RecF Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00611 recf recF protein | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >cd03239 ABC_SMC_head The structural maintenance of chromosomes (SMC) proteins are essential for successful chromosome transmission during replication and segregation of the genome in all organisms | Back alignment and domain information |
|---|
| >COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03276 ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >PF13476 AAA_23: AAA domain; PDB: 3AV0_B 3AUY_B 3AUX_A 2O5V_A 3QG5_B 3QF7_A 3THO_A | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains | Back alignment and domain information |
|---|
| >cd03279 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03278 ABC_SMC_barmotin Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >cd03277 ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >cd03274 ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >COG3950 Predicted ATP-binding protein involved in virulence [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF11398 DUF2813: Protein of unknown function (DUF2813); InterPro: IPR022602 This entry contains YbjD from Escherichia coli (strain K12), which is a conserved protein with a nucleotide triphosphate binding domain | Back alignment and domain information |
|---|
| >cd03276 ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04310 MukB: MukB N-terminal; InterPro: IPR007406 This is the N-terminal region of MukB | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >COG3593 Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >COG1106 Predicted ATPases [General function prediction only] | Back alignment and domain information |
|---|
| >cd03239 ABC_SMC_head The structural maintenance of chromosomes (SMC) proteins are essential for successful chromosome transmission during replication and segregation of the genome in all organisms | Back alignment and domain information |
|---|
| >PF13175 AAA_15: AAA ATPase domain | Back alignment and domain information |
|---|
| >cd03278 ABC_SMC_barmotin Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function | Back alignment and domain information |
|---|
| >COG4637 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >TIGR00611 recf recF protein | Back alignment and domain information |
|---|
| >COG5293 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG3910 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03275 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >cd03273 ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >cd03241 ABC_RecN RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport | Back alignment and domain information |
|---|
| >PRK00064 recF recombination protein F; Reviewed | Back alignment and domain information |
|---|
| >COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains | Back alignment and domain information |
|---|
| >cd03272 ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >PF13558 SbcCD_C: Putative exonuclease SbcCD, C subunit; PDB: 3QG5_B 3QF7_A 3THO_A 3EUK_H 3EUJ_A 3AV0_B 3AUY_B 3AUX_A | Back alignment and domain information |
|---|
| >cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >cd03274 ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity | Back alignment and domain information |
|---|
| >COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity | Back alignment and domain information |
|---|
| >COG4938 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain | Back alignment and domain information |
|---|
| >cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PRK13539 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK14079 recF recombination protein F; Provisional | Back alignment and domain information |
|---|
| >TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA | Back alignment and domain information |
|---|
| >cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters | Back alignment and domain information |
|---|
| >cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake | Back alignment and domain information |
|---|
| >PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D | Back alignment and domain information |
|---|
| >cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component | Back alignment and domain information |
|---|
| >cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea | Back alignment and domain information |
|---|
| >cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively | Back alignment and domain information |
|---|
| >PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >PRK13543 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters | Back alignment and domain information |
|---|
| >cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds | Back alignment and domain information |
|---|
| >cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >PRK13538 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK13540 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane | Back alignment and domain information |
|---|
| >PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >PRK14245 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids | Back alignment and domain information |
|---|
| >cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system | Back alignment and domain information |
|---|
| >cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR) | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine | Back alignment and domain information |
|---|
| >PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional | Back alignment and domain information |
|---|
| >PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin | Back alignment and domain information |
|---|
| >cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids | Back alignment and domain information |
|---|
| >PRK14268 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG4694 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK10908 cell division protein FtsE; Provisional | Back alignment and domain information |
|---|
| >cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB | Back alignment and domain information |
|---|
| >TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK14269 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system | Back alignment and domain information |
|---|
| >cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids | Back alignment and domain information |
|---|
| >PRK14247 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules | Back alignment and domain information |
|---|
| >PRK11248 tauB taurine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14270 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP | Back alignment and domain information |
|---|
| >cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters | Back alignment and domain information |
|---|
| >cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component | Back alignment and domain information |
|---|
| >PRK14242 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit | Back alignment and domain information |
|---|
| >TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed | Back alignment and domain information |
|---|
| >PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export | Back alignment and domain information |
|---|
| >PRK14241 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome | Back alignment and domain information |
|---|
| >COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] | Back alignment and domain information |
|---|
| >TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport | Back alignment and domain information |
|---|
| >COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >PRK11124 artP arginine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14259 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14262 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD | Back alignment and domain information |
|---|
| >cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein | Back alignment and domain information |
|---|
| >PRK14273 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01978 sufC FeS assembly ATPase SufC | Back alignment and domain information |
|---|
| >PRK13546 teichoic acids export protein ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional | Back alignment and domain information |
|---|
| >PRK14240 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK15056 manganese/iron transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK | Back alignment and domain information |
|---|
| >PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C | Back alignment and domain information |
|---|
| >cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1 | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI | Back alignment and domain information |
|---|
| >COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL | Back alignment and domain information |
|---|
| >cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E | Back alignment and domain information |
|---|
| >PRK14274 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE) | Back alignment and domain information |
|---|
| >PRK13651 cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14239 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14244 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02770 nickel_nikD nickel import ATP-binding protein NikD | Back alignment and domain information |
|---|
| >cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis | Back alignment and domain information |
|---|
| >PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins | Back alignment and domain information |
|---|
| >PRK10744 pstB phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PRK14271 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
| >COG5293 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK14250 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13541 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit | Back alignment and domain information |
|---|
| >PRK14254 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK09580 sufC cysteine desulfurase ATPase component; Reviewed | Back alignment and domain information |
|---|
| >PRK14238 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK14255 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea | Back alignment and domain information |
|---|
| >cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK | Back alignment and domain information |
|---|
| >PRK14272 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14235 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14248 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit | Back alignment and domain information |
|---|
| >cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth | Back alignment and domain information |
|---|
| >PRK14253 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional | Back alignment and domain information |
|---|
| >PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed | Back alignment and domain information |
|---|
| >PRK14261 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE | Back alignment and domain information |
|---|
| >PRK14275 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors | Back alignment and domain information |
|---|
| >cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment | Back alignment and domain information |
|---|
| >TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK13548 hmuV hemin importer ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14267 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14265 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14264 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14266 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1) | Back alignment and domain information |
|---|
| >PRK14263 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >CHL00131 ycf16 sulfate ABC transporter protein; Validated | Back alignment and domain information |
|---|
| >PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria | Back alignment and domain information |
|---|
| >PRK14243 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK14258 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK10070 glycine betaine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK14251 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13536 nodulation factor exporter subunit NodI; Provisional | Back alignment and domain information |
|---|
| >PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional | Back alignment and domain information |
|---|
| >COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional | Back alignment and domain information |
|---|
| >PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13536 nodulation factor exporter subunit NodI; Provisional | Back alignment and domain information |
|---|
| >PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14260 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional | Back alignment and domain information |
|---|
| >PRK03695 vitamin B12-transporter ATPase; Provisional | Back alignment and domain information |
|---|
| >COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14256 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14236 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13409 putative ATPase RIL; Provisional | Back alignment and domain information |
|---|
| >PRK13537 nodulation ABC transporter NodI; Provisional | Back alignment and domain information |
|---|
| >PRK14237 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT | Back alignment and domain information |
|---|
| >PRK14252 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 | Back alignment and domain information |
|---|
| >TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional | Back alignment and domain information |
|---|
| >cd03271 ABC_UvrA_II The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed | Back alignment and domain information |
|---|
| >PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D | Back alignment and domain information |
|---|
| >PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03279 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK14249 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK13547 hmuV hemin importer ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10762 D-ribose transporter ATP binding protein; Provisional | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11144 modC molybdate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09700 D-allose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02769 nickel_nikE nickel import ATP-binding protein NikE | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PF06470 SMC_hinge: SMC proteins Flexible Hinge Domain; InterPro: IPR010935 This entry represents the hinge region of the SMC (Structural Maintenance of Chromosomes) family of proteins | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed | Back alignment and domain information |
|---|
| >PRK13633 cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional | Back alignment and domain information |
|---|
| >PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional | Back alignment and domain information |
|---|
| >COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14257 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK10851 sulfate/thiosulfate transporter subunit; Provisional | Back alignment and domain information |
|---|
| >COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PRK13549 xylose transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03299 ABC_ModC_like Archeal protein closely related to ModC | Back alignment and domain information |
|---|
| >cd03291 ABCC_CFTR1 The CFTR subfamily domain 1 | Back alignment and domain information |
|---|
| >PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor | Back alignment and domain information |
|---|
| >TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional | Back alignment and domain information |
|---|
| >PRK14246 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth | Back alignment and domain information |
|---|
| >cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C | Back alignment and domain information |
|---|
| >TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA | Back alignment and domain information |
|---|
| >COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional | Back alignment and domain information |
|---|
| >PRK13549 xylose transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family | Back alignment and domain information |
|---|
| >COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component | Back alignment and domain information |
|---|
| >TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 | Back alignment and domain information |
|---|
| >PRK13538 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14247 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13409 putative ATPase RIL; Provisional | Back alignment and domain information |
|---|
| >cd03288 ABCC_SUR2 The SUR domain 2 | Back alignment and domain information |
|---|
| >TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family | Back alignment and domain information |
|---|
| >PRK10261 glutathione transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] | Back alignment and domain information |
|---|
| >TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK13539 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >cd03290 ABCC_SUR1_N The SUR domain 1 | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed | Back alignment and domain information |
|---|
| >PRK09700 D-allose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >cd03289 ABCC_CFTR2 The CFTR subfamily domain 2 | Back alignment and domain information |
|---|
| >PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR00630 uvra excinuclease ABC, A subunit | Back alignment and domain information |
|---|
| >cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional | Back alignment and domain information |
|---|
| >PRK10636 putative ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11176 lipid transporter ATP-binding/permease protein; Provisional | Back alignment and domain information |
|---|
| >COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK11248 tauB taurine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK10762 D-ribose transporter ATP binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11607 potG putrescine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10261 glutathione transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] | Back alignment and domain information |
|---|
| >TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14262 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional | Back alignment and domain information |
|---|
| >cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids | Back alignment and domain information |
|---|
| >PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14261 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14266 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14242 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity | Back alignment and domain information |
|---|
| >COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin | Back alignment and domain information |
|---|
| >TIGR01192 chvA glucan exporter ATP-binding protein | Back alignment and domain information |
|---|
| >PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional | Back alignment and domain information |
|---|
| >cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed | Back alignment and domain information |
|---|
| >PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK13540 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK14250 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK13541 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system | Back alignment and domain information |
|---|
| >cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >PRK13537 nodulation ABC transporter NodI; Provisional | Back alignment and domain information |
|---|
| >PRK14253 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family | Back alignment and domain information |
|---|
| >cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome | Back alignment and domain information |
|---|
| >cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity | Back alignment and domain information |
|---|
| >PRK14273 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules | Back alignment and domain information |
|---|
| >PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system | Back alignment and domain information |
|---|
| >PRK14236 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14274 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >TIGR01978 sufC FeS assembly ATPase SufC | Back alignment and domain information |
|---|
| >cd03242 ABC_RecF RecF is a recombinational DNA repair ATPase that maintains replication in the presence of DNA damage | Back alignment and domain information |
|---|
| >PRK14259 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1051 | ||||
| 4i99_A | 354 | Crystal Structure Of The Smchead Bound To The C-win | 8e-06 | ||
| 1xew_X | 182 | Structural Biochemistry Of Atp-Driven Dimerization | 2e-05 | ||
| 3kta_A | 182 | Structural Basis For Adenylate Kinase Activity In A | 3e-05 | ||
| 3aux_A | 371 | Crystal Structure Of Rad50 Bound To Adp Length = 37 | 5e-05 | ||
| 1w1w_A | 430 | Sc Smc1hd:scc1-c Complex, Atpgs Length = 430 | 9e-05 | ||
| 3tho_A | 382 | Crystal Structure Of Mre11:rad50 In Its AtpADP BOUN | 4e-04 | ||
| 3kta_B | 173 | Structural Basis For Adenylate Kinase Activity In A | 8e-04 |
| >pdb|4I99|A Chain A, Crystal Structure Of The Smchead Bound To The C-winged Helix Domain Of Scpa Length = 354 | Back alignment and structure |
|
| >pdb|1XEW|X Chain X, Structural Biochemistry Of Atp-Driven Dimerization And Dna Stimulated Activation Of Smc Atpases. Length = 182 | Back alignment and structure |
| >pdb|3KTA|A Chain A, Structural Basis For Adenylate Kinase Activity In Abc Atpases Length = 182 | Back alignment and structure |
| >pdb|3AUX|A Chain A, Crystal Structure Of Rad50 Bound To Adp Length = 371 | Back alignment and structure |
| >pdb|1W1W|A Chain A, Sc Smc1hd:scc1-c Complex, Atpgs Length = 430 | Back alignment and structure |
| >pdb|3THO|A Chain A, Crystal Structure Of Mre11:rad50 In Its AtpADP BOUND STATE Length = 382 | Back alignment and structure |
| >pdb|3KTA|B Chain B, Structural Basis For Adenylate Kinase Activity In Abc Atpases Length = 173 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 85.7 bits (211), Expect = 6e-17
Identities = 111/683 (16%), Positives = 214/683 (31%), Gaps = 201/683 (29%)
Query: 267 LDEAANTLHEFSKPIEGKKQEKAILDGDCKK--------LSS------LINENSKRRMDF 312
+D K I ++ + + DCK LS ++++++
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 313 L---------EKVDQ-VGVQVQGKYK----EMQELRRQEQSRQQRILKAREELAAAELDL 358
L E V + V ++ YK ++ +RQ + ++ R+ L D
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN---DN 123
Query: 359 QTVPAYEPP-HDKIEKLGSQILEL---------G-------VQANQKRLQKSEKEKILNQ 401
Q Y KL +LEL G A + S K +
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD--VCLSYKVQCKMD 181
Query: 402 NK---LTLRQCSDRLKDMEDKNNKLLHAL------RNSGAENIFEAYCWLQQH-RHELNK 451
K L L+ C+ +E LL+ + R+ + NI +Q R L
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 452 EAYGPVLLEV--NVSNRAHANYLEDHVGHYIWKSF--------ITQDAGDRDFLAKNLKP 501
+ Y LL V NV N W +F T+ DFL
Sbjct: 241 KPYENCLL-VLLNVQNAK------------AWNAFNLSCKILLTTRFKQVTDFL-SAATT 286
Query: 502 FDVPILNYVSNESSRKEPFQISEEMRALGISAR-LDQ-VFDAPHAVKEV---LISQFGLD 556
+ + E + + LD D P V +S
Sbjct: 287 THISL-------DHHSMTLTPDE---VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA-- 334
Query: 557 SSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVE----PVNQSRLLL 612
+ D +A D W H + + + +S+ +
Sbjct: 335 ---------ESIRDGLAT---WDNW---KHV--NCDKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 613 CSVDGNEIERLRSKKKKLEESVDELEESL-----KSMQTEQRLIEDEAAK---LQKEREE 664
SV S L ++++ ++ ++ K ++K+ +E
Sbjct: 378 LSV--------------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 665 -IINIVQIEKRKRREMENHINLRKRKLES--IEKEDDINTALAKLVDQAADLNIQQFKYA 721
I+I I + ++EN L + ++ I K D + + +DQ Y
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ----------Y- 472
Query: 722 IEIKNLLVEIVSCKW-SYAEKHMASIEFDAKIRE-----LEFN-LKQ---HEKLALQASL 771
+ S+ H+ +IE ++ L+F L+Q H+ A AS
Sbjct: 473 --------------FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG 518
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAES-----IAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+ ++++ + ++ D + E + F+ P++E+ + T ++
Sbjct: 519 SILNTLQQLKFYKPYICDNDPKYERLVNAILDFL-PKIEENLICSKYT----------DL 567
Query: 827 SQANSIFFLNQNILQEYEHRQRQ 849
+ ++ ++ I +E H+Q Q
Sbjct: 568 LRI-ALMAEDEAIFEE-AHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A* Length = 149 | Back alignment and structure |
|---|
| >3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Length = 371 | Back alignment and structure |
|---|
| >3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Length = 371 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430 | Back alignment and structure |
|---|
| >1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430 | Back alignment and structure |
|---|
| >3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A* Length = 203 | Back alignment and structure |
|---|
| >3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B Length = 339 | Back alignment and structure |
|---|
| >2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans} Length = 359 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12 Length = 227 | Back alignment and structure |
|---|
| >3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A* Length = 365 | Back alignment and structure |
|---|
| >1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Length = 322 | Back alignment and structure |
|---|
| >1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Length = 322 | Back alignment and structure |
|---|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 | Back alignment and structure |
|---|
| >3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A* Length = 483 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1051 | ||||
| d1e69a_ | 308 | c.37.1.12 (A:) Smc head domain {Thermotoga maritim | 2e-18 | |
| d1w1wa_ | 427 | c.37.1.12 (A:) Smc head domain {Baker's yeast (Sac | 4e-17 | |
| d1w1wa_ | 427 | c.37.1.12 (A:) Smc head domain {Baker's yeast (Sac | 5e-07 | |
| g1xew.1 | 329 | c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furi | 6e-15 | |
| g1ii8.1 | 369 | c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furio | 5e-13 | |
| d1qhla_ | 222 | c.37.1.12 (A:) Cell division protein MukB {Escheri | 6e-12 | |
| g1f2t.1 | 292 | c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furio | 2e-09 |
| >d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: ABC transporter ATPase domain-like domain: Smc head domain species: Thermotoga maritima [TaxId: 2336]
Score = 85.1 bits (209), Expect = 2e-18
Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 23 IIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
+ ++ L F +F + R+ ++GPNGSGKS+++ AI G ++ RA+
Sbjct: 3 LKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASEKF 62
Query: 82 AYVKRGE----ESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK 137
+ G +G + L + E +T+ R++ ++ ++ NG V ++ +
Sbjct: 63 DMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFA 122
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
+ V+ + + Q ++ SP +L E+ K +
Sbjct: 123 GTGLGVDFYS-IVGQGQIDRIVNASPEELRLESSKHPTSLVPRGSY 167
|
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 427 | Back information, alignment and structure |
|---|
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 427 | Back information, alignment and structure |
|---|
| >d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} Length = 222 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1051 | |||
| d1w1wa_ | 427 | Smc head domain {Baker's yeast (Saccharomyces cere | 99.93 | |
| g1xew.1 | 329 | Smc head domain {Pyrococcus furiosus [TaxId: 2261] | 99.86 | |
| d1e69a_ | 308 | Smc head domain {Thermotoga maritima [TaxId: 2336] | 99.83 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.76 | |
| d1w1wa_ | 427 | Smc head domain {Baker's yeast (Saccharomyces cere | 99.7 | |
| g1f2t.1 | 292 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.66 | |
| d1qhla_ | 222 | Cell division protein MukB {Escherichia coli [TaxI | 99.43 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.87 | |
| d1e69a_ | 308 | Smc head domain {Thermotoga maritima [TaxId: 2336] | 98.76 | |
| g1xew.1 | 329 | Smc head domain {Pyrococcus furiosus [TaxId: 2261] | 98.74 | |
| g1f2t.1 | 292 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.44 | |
| d1gxja_ | 161 | Smc hinge domain {Thermotoga maritima [TaxId: 2336 | 97.99 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 97.91 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 97.82 | |
| d2awna2 | 232 | Maltose transport protein MalK, N-terminal domain | 97.71 | |
| d1l2ta_ | 230 | MJ0796 {Archaeon Methanococcus jannaschii [TaxId: | 97.7 | |
| d2hyda1 | 255 | Putative multidrug export ATP-binding/permease pro | 97.7 | |
| d1g6ha_ | 254 | MJ1267 {Archaeon Methanococcus jannaschii [TaxId: | 97.65 | |
| d1vpla_ | 238 | Putative ABC transporter TM0544 {Thermotoga mariti | 97.43 | |
| d1ji0a_ | 240 | Branched chain aminoacid ABC transporter {Thermoto | 97.42 | |
| d1b0ua_ | 258 | ATP-binding subunit of the histidine permease {Sal | 97.41 | |
| d1v43a3 | 239 | Hypothetical protein PH0022, N-terminal domain {Py | 97.4 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 97.39 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 97.35 | |
| d1sgwa_ | 200 | Putative ABC transporter PF0895 {Pyrococcus furios | 97.32 | |
| d2onka1 | 240 | Molybdate/tungstate import ATP-binding protein Wtp | 97.3 | |
| d1v43a3 | 239 | Hypothetical protein PH0022, N-terminal domain {Py | 97.25 | |
| d1vpla_ | 238 | Putative ABC transporter TM0544 {Thermotoga mariti | 97.23 | |
| d1sgwa_ | 200 | Putative ABC transporter PF0895 {Pyrococcus furios | 97.19 | |
| d3dhwc1 | 240 | Methionine import ATP-binding protein MetN {Escher | 97.19 | |
| d2onka1 | 240 | Molybdate/tungstate import ATP-binding protein Wtp | 97.17 | |
| d1l7vc_ | 231 | ABC transporter involved in vitamin B12 uptake, Bt | 97.15 | |
| d1g2912 | 240 | Maltose transport protein MalK, N-terminal domain | 97.15 | |
| d1ji0a_ | 240 | Branched chain aminoacid ABC transporter {Thermoto | 97.13 | |
| d2awna2 | 232 | Maltose transport protein MalK, N-terminal domain | 97.11 | |
| d1g6ha_ | 254 | MJ1267 {Archaeon Methanococcus jannaschii [TaxId: | 97.1 | |
| d1r0wa_ | 281 | Cystic fibrosis transmembrane conductance regulato | 97.1 | |
| d1g2912 | 240 | Maltose transport protein MalK, N-terminal domain | 97.07 | |
| d1b0ua_ | 258 | ATP-binding subunit of the histidine permease {Sal | 97.04 | |
| d1oxxk2 | 242 | Glucose transport protein GlcV, N-terminal domain | 97.01 | |
| d3d31a2 | 229 | Sulfate/molybdate ABC transporter, ATP-binding pro | 96.87 | |
| d3d31a2 | 229 | Sulfate/molybdate ABC transporter, ATP-binding pro | 96.85 | |
| d1l2ta_ | 230 | MJ0796 {Archaeon Methanococcus jannaschii [TaxId: | 96.78 | |
| d1l7vc_ | 231 | ABC transporter involved in vitamin B12 uptake, Bt | 96.74 | |
| d3dhwc1 | 240 | Methionine import ATP-binding protein MetN {Escher | 96.72 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 96.7 | |
| d1oxxk2 | 242 | Glucose transport protein GlcV, N-terminal domain | 96.54 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 96.48 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 96.45 | |
| d1r0wa_ | 281 | Cystic fibrosis transmembrane conductance regulato | 96.31 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 95.96 | |
| d2hyda1 | 255 | Putative multidrug export ATP-binding/permease pro | 95.81 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 95.48 | |
| d1wb9a2 | 234 | DNA repair protein MutS, the C-terminal domain {Es | 95.38 | |
| d1ewqa2 | 224 | DNA repair protein MutS, the C-terminal domain {Th | 95.29 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 93.56 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 93.27 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 93.26 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 92.39 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 92.06 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 91.57 | |
| d1zp6a1 | 176 | Hypothetical protein Atu3015 {Agrobacterium tumefa | 91.51 | |
| d1yrba1 | 244 | ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss | 91.45 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 91.09 | |
| d1lw7a2 | 192 | Transcriptional regulator NadR, ribosylnicotinamid | 91.01 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 90.97 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 90.78 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 90.28 | |
| d1s96a_ | 205 | Guanylate kinase {Escherichia coli [TaxId: 562]} | 90.14 | |
| d1vmaa2 | 213 | GTPase domain of the signal recognition particle r | 90.04 | |
| d1okkd2 | 207 | GTPase domain of the signal recognition particle r | 89.9 | |
| d1kgda_ | 178 | Guanylate kinase-like domain of Cask {Human (Homo | 89.85 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 89.74 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 89.55 | |
| d1ls1a2 | 207 | GTPase domain of the signal sequence recognition p | 89.46 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 89.39 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 89.38 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 89.37 | |
| d1yj5a2 | 172 | 5' polynucleotide kinase-3' phosphatase, C-termina | 89.21 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 89.08 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 88.96 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 88.87 | |
| d2p67a1 | 327 | LAO/AO transport system kinase ArgK {Escherichia c | 88.78 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 88.69 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 88.5 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 88.33 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 88.33 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 88.29 | |
| d1u0la2 | 225 | Probable GTPase EngC (YjeQ), C-terminal domain {Th | 88.11 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 88.05 | |
| d1e32a2 | 258 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 87.84 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 87.71 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 87.69 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 87.51 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 87.49 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 87.15 | |
| d1sxje2 | 252 | Replication factor C5 {Baker's yeast (Saccharomyce | 85.98 | |
| d2iyva1 | 165 | Shikimate kinase (AroK) {Mycobacterium tuberculosi | 85.93 | |
| d1svia_ | 195 | Probable GTPase EngB {Bacillus subtilis [TaxId: 14 | 85.57 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 85.53 | |
| d1teva_ | 194 | UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] | 85.12 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 85.09 | |
| d1ukza_ | 196 | Uridylate kinase {Baker's yeast (Saccharomyces cer | 84.83 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 84.48 | |
| d3adka_ | 194 | Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | 84.46 | |
| d1jjva_ | 205 | Dephospho-CoA kinase {Haemophilus influenzae [TaxI | 84.24 | |
| d1t9ha2 | 231 | Probable GTPase EngC (YjeQ), C-terminal domain {Ba | 84.2 | |
| d1zaka1 | 189 | Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | 84.11 | |
| d1cr2a_ | 277 | Gene 4 protein (g4p, DNA primase), helicase domain | 83.95 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 83.85 | |
| d1in4a2 | 238 | Holliday junction helicase RuvB {Thermotoga mariti | 83.71 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 83.48 | |
| d1vhta_ | 208 | Dephospho-CoA kinase {Escherichia coli [TaxId: 562 | 83.21 | |
| d1wf3a1 | 178 | GTPase Era, N-terminal domain {Thermus thermophilu | 83.21 | |
| d1ofha_ | 309 | HslU {Haemophilus influenzae [TaxId: 727]} | 83.2 | |
| d1nlfa_ | 274 | Hexameric replicative helicase repA {Escherichia c | 82.93 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 82.85 | |
| d1egaa1 | 179 | GTPase Era, N-terminal domain {Escherichia coli [T | 82.84 | |
| d1a7ja_ | 288 | Phosphoribulokinase {Rhodobacter sphaeroides [TaxI | 82.78 | |
| d1ixza_ | 247 | AAA domain of cell division protein FtsH {Thermus | 82.73 | |
| d1n0wa_ | 242 | DNA repair protein Rad51, catalytic domain {Human | 82.68 | |
| d1tf7a2 | 242 | Circadian clock protein KaiC {Synechococcus sp. st | 82.61 | |
| d1uf9a_ | 191 | Dephospho-CoA kinase {Thermus thermophilus [TaxId: | 82.37 | |
| d1ky3a_ | 175 | Rab-related protein ypt7p {Baker's yeast (Saccharo | 82.32 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 82.17 | |
| d1odfa_ | 286 | Hypothetical protein Ygr205W {Baker's yeast (Sacch | 82.12 | |
| d2fnaa2 | 283 | Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ | 81.56 | |
| d2ocpa1 | 241 | Deoxyguanosine kinase {Human (Homo sapiens) [TaxId | 81.55 | |
| d2qm8a1 | 323 | Metallochaperone MeaB {Methylobacterium extorquens | 81.36 | |
| d2cxxa1 | 184 | GTP-binding protein engB {Pyrococcus horikoshii [T | 81.2 | |
| d1sq5a_ | 308 | Pantothenate kinase PanK {Escherichia coli [TaxId: | 80.85 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 80.72 | |
| d1ckea_ | 225 | CMP kinase {Escherichia coli [TaxId: 562]} | 80.67 | |
| d1f6ba_ | 186 | SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: | 80.04 |
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: ABC transporter ATPase domain-like domain: Smc head domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=4.2e-25 Score=213.76 Aligned_cols=155 Identities=26% Similarity=0.362 Sum_probs=132.9
Q ss_pred CEEEEEEEECCCCCC-CEEEECC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 138999974033321-0678159-96159984899984799999999835987555543431000003872469999998
Q 001573 21 GNIIEIELHNFMTFD-HLICKPG-SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLR 98 (1051)
Q Consensus 21 m~i~~l~l~nf~~~~-~~~i~f~-~~~~~I~G~NGsGKSti~~Ai~~~L~g~~~~~~r~~~~~~~i~~g~~~a~v~i~~~ 98 (1051)
|+|++|+|.||+||. .+.|+|+ +|+|+|+||||||||||++||+||||+.+. ..|++.+.++|+.|...+.+...|.
T Consensus 1 ~ki~~l~l~NFks~~~~~~i~f~~~~l~~i~G~NGsGKS~ileAi~~~lg~~~~-~~R~~~~~dli~~g~~~~~~~~~~~ 79 (427)
T d1w1wa_ 1 GRLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVRSN-HLRSNILKDLIYRGVLNDENSDDYD 79 (427)
T ss_dssp CCEEEEEEESCSSCCSEEEEECTTCSEEEEECSTTSSHHHHHHHHHHHTTC----------CGGGSCCC-----------
T ss_pred CEEEEEEEECEEEECCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCHHHEECCCCCCCCEEEEE
T ss_conf 928899994944107987975899998999999999889999999998577851-0023340665246876775128987
Q ss_pred EC-----------------CCCCEEEEEEEEECCCCCEEEECCEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 25-----------------9985289999985399601888793405878999998828644653233342107898615
Q 001573 99 GD-----------------TKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161 (1051)
Q Consensus 99 ~~-----------------~~~~~~~i~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~q~~~~~~~~~ 161 (1051)
+. .++..+.|.|.+..++.+.|++||+.++..++..++..+++...+++++++||++..|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~r~i~~~~~~~~~in~~~~~~~~i~~~~~~~~~~~~~~~~~i~q~~~~~~~~~ 159 (427)
T d1w1wa_ 80 NEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQ 159 (427)
T ss_dssp --------CCEEEEEEEEEETTEEEEEEEEEETTSCEEEEETTEEECHHHHHHHHHHTTCCTTTCTTEECTTCTTHHHHS
T ss_pred EECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHC
T ss_conf 41233444200011245305892799999972589636702764442999999998708787886524220456666640
Q ss_pred CCHHHHHHHHHHHCC
Q ss_conf 906789999986299
Q 001573 162 SPVKLLEETEKAVGD 176 (1051)
Q Consensus 162 ~~~~~~~~~~~~~g~ 176 (1051)
+|..++..++.++|.
T Consensus 160 ~~~~~~~~le~~~~~ 174 (427)
T d1w1wa_ 160 SPVELSRMFEEVSGS 174 (427)
T ss_dssp CHHHHHHTC------
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 653122322223333
|
| >d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1gxja_ d.215.1.1 (A:) Smc hinge domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} | Back information, alignment and structure |
|---|
| >d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} | Back information, alignment and structure |
|---|
| >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
| >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
| >d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|