Citrus Sinensis ID: 001964

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990

MAHLFRDLSLGHSKRESTPPPPSPPQLTMPPRAAVDLPSPFGQLTQLSDSDLRLTAYEIFVAACRTSTGKPLSFIPNSNSSSDSPTHHNLSSPSHNSPTLQRSLTSAAASKMKKALGLKSPGSGSKKSPGSGPGSGQGKSKKALTVGELMRTQMGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSNIAAQRLRQIISAALDRPIETGRNNESMQVLRSTVISLASRSDGSLNEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAKDAKATKDPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTEDISNEYRRRRKGEVDVPRSRVETYIRSSLRTAFAQRMEKADSSRRASKNQPNPLPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQEGFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWKKKEKSPNSQKKNSQVATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLETYGSSARSRLPLPPTSGQWNPTEPNTLLRVLCYRNDEAATRFLKKTYNLPKKL

ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccEEEcHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHcccccccHHHHHHHccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHccccccc

ccHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHEHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccccEEccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccEHEEEHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHccccccc

mahlfrdlslghskrestppppsppqltmppraavdlpspfgqltqlsdsdLRLTAYEIFVAACrtstgkplsfipnsnsssdspthhnlsspshnsptlqRSLTSAAASKMKKAlglkspgsgskkspgsgpgsgqgkskkaLTVGELMRTQMGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQqlkysdftdqQEYDAWQKRTLKLLEAGlllhprvpldksnIAAQRLRQIISAALdrpietgrnneSMQVLRSTVISLasrsdgslnepchwadgfpfNLRLYEMLLEACfdssyetsIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAKdakatkdpeyAKILSSTLTSIMSWAEKRLLAYhdtfddgnletMDGIVSLGVSSAKILTEDISNEYrrrrkgevdvprsrVETYIRSSLRTAFAQRMEKAdssrrasknqpnplpVLAILAKDVGELAIKERRVfspilkrwhpLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVedsvdsddggkaiiremppyeaEGAIANLVKMWLKTRIDRLKEWVDrnlqqedwnpqqnqegFASSAVEVLRIIDETLDaffqlpipmhpallPDLMAGLDRCLQYYVTKaksgcgsrntyvptmpaltrcttgskfqgvwkkkekspnsqkknSQVAtmngeisfrvpqlCIRINSFHRIKSELDVLEKRVITHLRncesahaedfsnglgkkfeltpaaCVEGVQQLSEAVAYKIVFHDLSHVLwdglyvgepsssriEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLaggpsraftrqdsQIIEDDFKSLKDLFwangdglpieLIDKFSAtargvlplfrtDTESLIERFRRVTLetygssarsrlplpptsgqwnptepntllRVLCYRNDEAATRFLKKtynlpkkl

MAHLFRDlslghskrestppppsppqLTMPPRAAVDLPSPFGQLTQLSDSDLRLTAYEIFVAACRTSTGKPLSFIPNSNSSSDSPTHHNLSSPSHNSPTLQRSLTSAAASKMKKAlglkspgsgskkspgsgpgsgqgksKKALTVGELMrtqmgvsetvdsRVRRALLRISaaqvgrkiestvlPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLlhprvpldksniAAQRLRQIISAAldrpietgrnnesmqVLRSTVISLASRSDGSLNEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAkdakatkdpeYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGvssakiltedisneyrrrrkgevdvprsrvetyirSSLRTAFAQRMEKadssrrasknqpnplpVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIavedsvdsddggkAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQqedwnpqqnqeGFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTkaksgcgsrntyvptmpaltrcttgskfqgvwkkkekspnsqkknsqVATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLiisdtvherVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGvlplfrtdtesliERFRRVTletygssarsrlplpptsgqwnptepnTLLRVLCYRNDEAATrflkktynlpkkl

MAHLFRDLSLGHSKRESTppppsppqltmppRAAVDLPSPFGQLTQLSDSDLRLTAYEIFVAACRTSTGKPLSFIpnsnsssdspthhnlsspshnsptlQRSLTSAAASKMkkalglkspgsgskkspgsgpgsgqgkskkaLTVGELMRTQMGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSNIAAQRLRQIISAALDRPIETGRNNESMQVLRSTVISLASRSDGSLNEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAKDAKATKDPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTEDISNEYRRRRKGEVDVPRSRVETYIRSSLRTAFAQRMEKADSSRRASKNQPNPLPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQEGFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWkkkekspnsqkknsqVATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLETYGSSARSRLPLPPTSGQWNPTEPNTLLRVLCYRNDEAATRFLKKTYNLPKKL

*************************************************SDLRLTAYEIFVAACRTST*********************************************************************************************SRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSNIAAQRLRQIISAALD*****************TVISL*******LNEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAKDA****DPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTEDI****************************************************PVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSV*****GKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDW*******GFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVW********************GEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLETY**********************NTLLRVLCYRNDEAATRFLKKT*******

***********************************DLPSPFGQLTQLSDSDLRLTAYEIFVAACRTSTGK******************************************************************************LMRT*MGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHP***************************************S*************NEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQL****************KILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTED******************RVETYIRSSLRTAFAQ******************LPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQE************SSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKF*GVWK**E*******************SFRVPQLCIRINSFHRIKSELDVLEKRVI********************KFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERF**************************PTEPNTLLRVLCYRNDEAATRFLKKTYNLPKK*

MAHLFRDLSLG****************TMPPRAAVDLPSPFGQLTQLSDSDLRLTAYEIFVAACRTSTGKPLSFIPN*****************************************************************ALTVGELMRTQMGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSNIAAQRLRQIISAALDRPIETGRNNESMQVLRSTVISLASRSDGSLNEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAKDAKATKDPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTEDISNEYR*********PRSRVETYIRSSLRTA*****************QPNPLPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQEGFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGS**********************ATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLETYGSSARSRLPLPPTSGQWNPTEPNTLLRVLCYRNDEAATRFLKKTYNLPKKL

***********************************DLPSPFGQLTQLSDSDLRLTAYEIFVAACRTST*K***********************************************************************KALTVGELMRTQMGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSNIAAQRLRQIISAALDRPIETGRNNESMQVLRSTVISLASRSDGSLNEPCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLYAADNQLAEVAKDAKATKDPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTEDISNEYR*R**GEVDVPRSRVETYIRSSLRTAFAQRMEKADSSR****NQPNPLPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQEGFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWKKKE*******************SFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLET*****************WNPTEPNTLLRVLCYRNDEAATRFLKKTYNLPK**

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		990
224092282		994	predicted protein [Populus trichocarpa]	0.994	0.990	0.829	0.0
449507259		987	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.991	0.994	0.821	0.0
449461319		992	PREDICTED: uncharacterized protein LOC10	0.991	0.989	0.818	0.0
225429932		985	PREDICTED: uncharacterized protein LOC10	0.990	0.995	0.797	0.0
356507927		986	PREDICTED: uncharacterized protein LOC10	0.990	0.994	0.793	0.0
296081844		1002	unnamed protein product [Vitis vinifera]	0.990	0.979	0.785	0.0
356515615		983	PREDICTED: uncharacterized protein LOC10	0.990	0.997	0.792	0.0
145360324		987	uncharacterized protein [Arabidopsis tha	0.990	0.993	0.774	0.0
297825651		996	hypothetical protein ARALYDRAFT_481432 [	0.990	0.984	0.770	0.0
3643603		993	unknown protein [Arabidopsis thaliana]	0.990	0.987	0.769	0.0

>gi\|224092282\|ref\|XP_002309542.1\| predicted protein [Populus trichocarpa] gi\|222855518\|gb\|EEE93065.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1670 bits (4325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 829/999 (82%), Positives = 904/999 (90%), Gaps = 14/999 (1%)

Query: 1   MAHLFRDLSLGHSKRESTP--PPPSPPQLT-MPPRAAV---DLPSPFGQL-TQLSDSDLR 53
           MA LFRDLSLGHSKRES P  PP    QL+ MP +  +   DL SP GQL TQL+D DLR
Sbjct: 1   MASLFRDLSLGHSKRESPPLKPPLKLQQLSIMPSKPTITTTDLDSPLGQLATQLTDPDLR 60

Query: 54  LTAYEIFVAACRTSTGKPLSFIPNSNSSSDSPTHHNLSSPSHNSPTLQRSLTSAAASKMK 113
            TAYEIFVAACRTS+GKPL++ PN  S+SDS T+H+  SP  NSP LQRSLTSAAASKMK
Sbjct: 61  STAYEIFVAACRTSSGKPLTYTPNP-SNSDSTTNHSNHSP--NSPALQRSLTSAAASKMK 117

Query: 114 KALGLKSPGSGSKKSPGSGPGSGQGK--SKKALTVGELMRTQMGVSETVDSRVRRALLRI 171
           KALGLKSPGSGSKKSPGSG  SG G+  +++ALTVGELMR QM VSETVDSR+RRALLRI
Sbjct: 118 KALGLKSPGSGSKKSPGSGSSSGSGQGKARRALTVGELMRAQMRVSETVDSRIRRALLRI 177

Query: 172 SAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSN 231
           +A QVGR+IES VLPLELLQQLK SDFTDQQEY+ WQKRT+K+LEAGLLLHP VPLDKSN
Sbjct: 178 AAGQVGRRIESVVLPLELLQQLKLSDFTDQQEYEVWQKRTMKVLEAGLLLHPHVPLDKSN 237

Query: 232 IAAQRLRQIISAALDRPIETGRNNESMQVLRSTVISLASRSDGSLNEPCHWADGFPFNLR 291
             +QRLRQII  A+DRPIETG+NNESMQVLRS V+SLASRSDGSL+E CHWADG P NLR
Sbjct: 238 PTSQRLRQIIQGAMDRPIETGKNNESMQVLRSAVMSLASRSDGSLSEICHWADGIPLNLR 297

Query: 292 LYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQ 351
           LYEMLL+ACFD + ETS+I+E+DELME IKKTW ILGMNQMLHN+CFTWVLFHRFVATGQ
Sbjct: 298 LYEMLLQACFDVNDETSVIDEIDELMEHIKKTWTILGMNQMLHNLCFTWVLFHRFVATGQ 357

Query: 352 ADTDLLYAADNQLAEVAKDAKATKDPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLE 411
           A+TDLL AAD QLAEVA+DAK TKDP+Y+KILSSTL+SI+ WAEKRLLAYHDTFD GN+E
Sbjct: 358 AETDLLDAADGQLAEVARDAKTTKDPQYSKILSSTLSSILGWAEKRLLAYHDTFDSGNVE 417

Query: 412 TMDGIVSLGVSSAKILTEDISNEYRRRRKGEVDVPRSRVETYIRSSLRTAFAQRMEKADS 471
           TM GIVSLGVS+AKIL EDISNEYRR+RKGEVDV R+R++TYIRSSLRTAFAQRMEKADS
Sbjct: 418 TMQGIVSLGVSAAKILVEDISNEYRRKRKGEVDVVRARIDTYIRSSLRTAFAQRMEKADS 477

Query: 472 SRRASKNQPNPLPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEI 531
           SRRASKNQPNPLPVLAILAKDVGELA+ E++VFSPILKRWHP +AGVAVATLHACYGNEI
Sbjct: 478 SRRASKNQPNPLPVLAILAKDVGELAVNEKQVFSPILKRWHPFSAGVAVATLHACYGNEI 537

Query: 532 KQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIA 591
           KQFIS I ELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAE AIA
Sbjct: 538 KQFISGITELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEAAIA 597

Query: 592 NLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQEGFASSAVEVLRIIDETLDAFFQLPIP 651
           +LVK W+K R+DRLKEWVDRNLQQE WNPQ NQEG+A SAVEVLRIIDETLDA+FQLPIP
Sbjct: 598 DLVKAWIKARLDRLKEWVDRNLQQEVWNPQANQEGYAPSAVEVLRIIDETLDAYFQLPIP 657

Query: 652 MHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWKKKEKS 711
           MHP LLPDLM GLDRCLQYY TKAKSGCGSRNTYVPTMPALTRCT  SKF   WKKKEKS
Sbjct: 658 MHPVLLPDLMTGLDRCLQYYATKAKSGCGSRNTYVPTMPALTRCTMESKF--AWKKKEKS 715

Query: 712 PNSQKKNSQVATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDF 771
            N+QK+NSQVATMNG+ SF VPQLC+RIN+ HRI+SELDVLEKR+ITHLRN ESAHAEDF
Sbjct: 716 ANTQKRNSQVATMNGDNSFGVPQLCVRINTLHRIRSELDVLEKRIITHLRNSESAHAEDF 775

Query: 772 SNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQEL 831
           SNGL KKFELTPAAC+EGVQ LSEAVAYK+VFHDLSHV WDGLYVGEPSSSRIEP +QE+
Sbjct: 776 SNGLAKKFELTPAACIEGVQALSEAVAYKLVFHDLSHVFWDGLYVGEPSSSRIEPFIQEV 835

Query: 832 ERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLK 891
           ERNLLIIS+ +HERVR R++TDIM+ASFDGFLLVLLAGGPSRAF RQDSQIIEDDFKSLK
Sbjct: 836 ERNLLIISNIIHERVRPRVVTDIMRASFDGFLLVLLAGGPSRAFMRQDSQIIEDDFKSLK 895

Query: 892 DLFWANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLETYGSSARSRLPLPP 951
           DLFWANGDGLP ELIDKFS T R +LPLFRTDTESLIER+RRVTLETYGSSARS+LPLPP
Sbjct: 896 DLFWANGDGLPTELIDKFSTTVRSILPLFRTDTESLIERYRRVTLETYGSSARSKLPLPP 955

Query: 952 TSGQWNPTEPNTLLRVLCYRNDEAATRFLKKTYNLPKKL 990
           TSGQWNPT+PNTLLR+LCYRNDEAA+R+LKKTYNLPKKL
Sbjct: 956 TSGQWNPTDPNTLLRMLCYRNDEAASRYLKKTYNLPKKL 994

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449507259\|ref\|XP_004162979.1\| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101217303 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449461319\|ref\|XP_004148389.1\| PREDICTED: uncharacterized protein LOC101217303 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|225429932\|ref\|XP_002283826.1\| PREDICTED: uncharacterized protein LOC100250865 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356507927\|ref\|XP_003522714.1\| PREDICTED: uncharacterized protein LOC100814675 [Glycine max]	Back alignment and taxonomy information

>gi\|296081844\|emb\|CBI20849.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356515615\|ref\|XP_003526494.1\| PREDICTED: uncharacterized protein LOC100796233 [Glycine max]	Back alignment and taxonomy information

>gi\|145360324\|ref\|NP_180151.3\| uncharacterized protein [Arabidopsis thaliana] gi\|110737479\|dbj\|BAF00682.1\| hypothetical protein [Arabidopsis thaliana] gi\|330252660\|gb\|AEC07754.1\| uncharacterized protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297825651\|ref\|XP_002880708.1\| hypothetical protein ARALYDRAFT_481432 [Arabidopsis lyrata subsp. lyrata] gi\|297326547\|gb\|EFH56967.1\| hypothetical protein ARALYDRAFT_481432 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|3643603\|gb\|AAC42250.1\| unknown protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		990
TAIR\|locus:2043515		987	AT2G25800 "AT2G25800" [Arabido	0.991	0.994	0.740	0.0
TAIR\|locus:2061619		952	AT2G20010 "AT2G20010" [Arabido	0.952	0.990	0.587	1.9e-296
TAIR\|locus:2050997		1039	AT2G33420 "AT2G33420" [Arabido	0.853	0.813	0.420	1.6e-195
TAIR\|locus:2018339		1035	AT1G04470 "AT1G04470" [Arabido	0.853	0.816	0.404	7.5e-187
TAIR\|locus:2169424		1101	AT5G06970 "AT5G06970" [Arabido	0.816	0.733	0.331	1.2e-117
TAIR\|locus:2139707		1117	AT4G11670 "AT4G11670" [Arabido	0.812	0.719	0.254	2.3e-65

TAIR\|locus:2043515 AT2G25800 "AT2G25800" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3754 (1326.5 bits), Expect = 0., P = 0.
 Identities = 737/995 (74%), Positives = 825/995 (82%)

Query:     1 MAHLFRDLSLGHSKRESTXXXXXXXXXXXXXRAAVDLP-SPFGQLT-QLSDSDLRLTAYE 58
             MAHLFR+LSLGHSKREST               + DLP SP GQL  QLSDSDLRLTAYE
Sbjct:     1 MAHLFRELSLGHSKRESTPPPPSHSATSRSSSMSSDLPPSPLGQLAVQLSDSDLRLTAYE 60

Query:    59 IFVAACRTSTGKPLSFIXXXXXXXXXXXXXXXXXXXXXXXXXQRSLTSAAASKMXXXXXX 118
             IFVAACR++TGKPLS                           QRSLTS AASKM      
Sbjct:    61 IFVAACRSATGKPLS-----SAVSVAVLNQDSPNGSPASPAIQRSLTSTAASKMKKALGL 115

Query:   119 XXXXXXXXXXXXXXXXXXXXXXXXX--LTVGELMRTQMGVSETVDSRVRRALLRISAAQV 176
                                         TVGELMR QM VSE VDSRVRRA LRI+A+QV
Sbjct:   116 RSSSSLSPGSNKSSGSASGSNGKSKRPTTVGELMRIQMRVSEAVDSRVRRAFLRIAASQV 175

Query:   177 GRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRVPLDKSNIAAQR 236
             GRKIES VLPLELLQQLK SDFTDQQEYDAW KR+LK+LEAGLLLHPRVPLDK+N ++QR
Sbjct:   176 GRKIESVVLPLELLQQLKSSDFTDQQEYDAWLKRSLKVLEAGLLLHPRVPLDKTN-SSQR 234

Query:   237 LRQIISAALDRPIETGRNNESMQVLRSTVISLASRSDGSLNEPCHWADGFPFNLRLYEML 296
             LRQII  ALDRP+ETGRNNE MQ LRS V+SLA+RSDGS ++ CHWADG PFNLRLYE+L
Sbjct:   235 LRQIIHGALDRPLETGRNNEQMQSLRSAVMSLATRSDGSFSDSCHWADGSPFNLRLYELL 294

Query:   297 LEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDL 356
             LEACFDS+  TS++EEVD+LME IKKTWVILG+NQMLHN+CFTW+LF R+V TGQ + DL
Sbjct:   295 LEACFDSNDATSMVEEVDDLMEHIKKTWVILGINQMLHNLCFTWLLFSRYVVTGQVEMDL 354

Query:   357 LYAADNQLAEVAKDAKATKDPEYAKILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGI 416
             L+A D+QLAEVAKDAK TKDPEY+++LSSTL++I+ WAEKRLLAYHDTFD GN+ TM+GI
Sbjct:   355 LHACDSQLAEVAKDAKTTKDPEYSQVLSSTLSAILGWAEKRLLAYHDTFDRGNIHTMEGI 414

Query:   417 VSLGVSSAKILTEDISNEYRRRRKGEVDVPRSRVETYIRSSLRTAFAQRMEKADSSRRAS 476
             VSLGVS+A+IL EDISNEYRRRRKGEVDV R+R+ETYIRSSLRT+FAQRMEKADSSRRAS
Sbjct:   415 VSLGVSAARILVEDISNEYRRRRKGEVDVARTRIETYIRSSLRTSFAQRMEKADSSRRAS 474

Query:   477 KNQPNPLPVLAILAKDVGELAIKERRVFSPILKRWHPLAAGVAVATLHACYGNEIKQFIS 536
             +NQ NPLPVLAILAKD+GELAI+E+R+FSPILKRWHP AAGVAVATLH CYGNEIKQFI+
Sbjct:   475 RNQKNPLPVLAILAKDIGELAIQEKRMFSPILKRWHPFAAGVAVATLHVCYGNEIKQFIA 534

Query:   537 SIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKM 596
              I ELTPDAVQ+LRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPP+EAE  IANLVK 
Sbjct:   535 GISELTPDAVQILRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPFEAETVIANLVKD 594

Query:   597 WLKTRIDRLKEWVDRNLQQEDWNPQQNQEG-FASSAVEVLRIIDETLDAFFQLPIPMHPA 655
             W+K RIDRLKEWVDRNLQQE W P +N EG +A SA EVLRI DETL+AFFQLPIPMHPA
Sbjct:   595 WIKARIDRLKEWVDRNLQQEVWKPLENLEGGYAQSAAEVLRITDETLEAFFQLPIPMHPA 654

Query:   656 LLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWXXXXXXXXXX 715
             +LPDL+ GLD+ LQYYV+KAKSGCGSR TY+PTMPALTRCTTGSKFQ  W          
Sbjct:   655 VLPDLIIGLDKYLQYYVSKAKSGCGSRTTYMPTMPALTRCTTGSKFQ--WKKKEKTPTTQ 712

Query:   716 XXXXXVATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGL 775
                  V+ MNGE SF V Q+C+RINS H+I+SELDV+EKRVITHLRNCESAH +DFSNGL
Sbjct:   713 KRESQVSVMNGENSFGVTQICVRINSLHKIRSELDVVEKRVITHLRNCESAHTDDFSNGL 772

Query:   776 GKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEPLLQELERNL 835
              KKFELTPAAC+EGVQQLSE++AYK+VFHDLSH LWDGLY+G+ SSSRI+P L+ELE+NL
Sbjct:   773 EKKFELTPAACIEGVQQLSESLAYKVVFHDLSHTLWDGLYIGDLSSSRIDPFLKELEQNL 832

Query:   836 LIISDTVHERVRTRIITDIMKASFDGFLLVLLAGGPSRAFTRQDSQIIEDDFKSLKDLFW 895
              +I++TVHERVRTRIITDIM+AS DGFLLVLLAGGPSRAFTRQDSQI+E+DFKS+KD+FW
Sbjct:   833 TVIAETVHERVRTRIITDIMRASLDGFLLVLLAGGPSRAFTRQDSQIMEEDFKSMKDMFW 892

Query:   896 ANGDGLPIELIDKFSATARGVLPLFRTDTESLIERFRRVTLETYGSSARSRLPLPPTSGQ 955
             ANGDGL ++LIDKFS T RGVLPLF TDT+SLIERF+  TLE YGSSA+SRLPLPPTSGQ
Sbjct:   893 ANGDGLAMDLIDKFSTTVRGVLPLFSTDTDSLIERFKGTTLEAYGSSAKSRLPLPPTSGQ 952

Query:   956 WNPTEPNTLLRVLCYRNDEAATRFLKKTYNLPKKL 990
             WN  EPNTLLRVLCYRNDE+ATRFLKKTYNLPKKL
Sbjct:   953 WNGMEPNTLLRVLCYRNDESATRFLKKTYNLPKKL 987

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

TAIR\|locus:2061619 AT2G20010 "AT2G20010" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2050997 AT2G33420 "AT2G33420" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2018339 AT1G04470 "AT1G04470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2169424 AT5G06970 "AT5G06970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2139707 AT4G11670 "AT4G11670" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00061706	hypothetical protein (994 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		990
pfam05664		677	pfam05664, DUF810, Protein of unknown function (DU	0.0
pfam10540		119	pfam10540, Membr_traf_MHD, Munc13 (mammalian uncoo	0.002

>gnl\|CDD\|218680 pfam05664, DUF810, Protein of unknown function (DUF810)	Back alignment and domain information

 Score =  841 bits (2174), Expect = 0.0
 Identities = 376/730 (51%), Positives = 468/730 (64%), Gaps = 74/730 (10%)

Query: 46  QLSDSDLRLTAYEIFVAACRTSTGKPLSFIPNSNSSSDSPTHHNLSSPSHNSPTLQRSLT 105
            LSD DLR TAYEI VAACR+S   PL +      S  S                     
Sbjct: 1   GLSDDDLRETAYEILVAACRSS--GPLIYPSKEKKSEKS--------------------- 37

Query: 106 SAAASKMKKALGLKSPGSGSKKSPGSGPGSGQGKSKKALTVGELMRTQMGVSETVDSRVR 165
                ++KKALGLK   SGS         S   +S++ +T  E+MR QM +SE +DSR+R
Sbjct: 38  -----RVKKALGLKRSKSGSS-------SSQPQRSRRPVTQLEIMRIQMRISEQMDSRIR 85

Query: 166 RALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYDAWQKRTLKLLEAGLLLHPRV 225
           R LLR +  QVGR+ ES VLPLELLQQLK S+F D +EY+AWQKR LKLLE GL+LHP V
Sbjct: 86  RGLLRAAVGQVGRREESIVLPLELLQQLKASEFPDPKEYEAWQKRQLKLLEEGLILHPCV 145

Query: 226 PLDKSNIAAQRLRQII-----SAALDRPIETGRNNESMQVLRSTVISLASRS--DGSLNE 278
           PLDKSN +AQRLR+II     S +L RP +T + +E ++ LRS V+SLA R    G   +
Sbjct: 146 PLDKSNRSAQRLREIIRAIDESDSLPRPTDTNKRSEILRSLRSVVMSLAWRPSRGGMTGD 205

Query: 279 PCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCF 338
            CHWADG+P N+RLYE LLEA FD   + S+ EEVDE++E +KKTW ILG+ + +HN+C 
Sbjct: 206 SCHWADGYPLNIRLYEKLLEAVFDQVDDGSLAEEVDEILELLKKTWSILGITETIHNVCL 265

Query: 339 TWVLFHRFVATGQADTDLLYAADNQLAEVAKDAKA-TKDPEYAK------------ILSS 385
            W LF ++V TG  + DLL AA  QLAEVA DAK  TK+  Y K            +L+S
Sbjct: 266 AWALFRQYVVTG--EPDLLAAAIAQLAEVALDAKRGTKEALYLKSLARSVTTIHSPLLAS 323

Query: 386 TLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAKILTEDISNEYRRRRKGEVDV 445
            L+SI+ W+EKRLL YHDTFD+GN+  M+ IVS+  S+A+IL EDIS E RR RK     
Sbjct: 324 ALSSILGWSEKRLLDYHDTFDEGNIGVMEDIVSIAYSAARILGEDISAELRRARKTCA-- 381

Query: 446 PRSRVETYIRSSLRTAFAQRMEKADSSRRASKNQPNPLPVLAILAKDVGELAIKERRVFS 505
            R R++ YIRSSL+ AFA+     D+         NPL VLA LA++  +LA KE   FS
Sbjct: 382 -RDRIDEYIRSSLKNAFAK-----DAKVADGDATTNPLHVLAQLAEETADLAKKELERFS 435

Query: 506 PILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVE 565
           PILKRWHP AAGVA ATLH CYGN++KQF++   ELT DAV+VL AADKLEK LVQIA  
Sbjct: 436 PILKRWHPQAAGVAAATLHKCYGNDLKQFLAGGTELTEDAVEVLWAADKLEKALVQIA-- 493

Query: 566 DSVDSDDGGKAIIREMPPYEAEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQE 625
            +VD DDGGKA+IREM PYE E  I NLVK W+  +IDRLKEWVDR ++QE W P+ N +
Sbjct: 494 -AVDCDDGGKAVIREMEPYEVESVIGNLVKTWINEKIDRLKEWVDRAIEQETWKPKSNDQ 552

Query: 626 GFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTY 685
            +A SAVEVLRI++ETLD FF LPIP H +LL  L  G+D   Q Y +K  S  GSR   
Sbjct: 553 RYAPSAVEVLRIVEETLDGFFGLPIPAHVSLLRALTEGIDAAFQKYTSKVVSSLGSREDL 612

Query: 686 VPTMPALTRCTTGSKFQGVWKKKEKSPNS-QKKNSQVATMNGEISFRVPQLCIRINSFHR 744
           VP +P LTRC   S    +WKKK K  +   ++ SQ           VP LC+R+N+ H 
Sbjct: 613 VPPLPPLTRCKKASGIVDLWKKKFKPSSPPDERKSQNID-----ELGVPALCVRLNTLHY 667

Query: 745 IKSELDVLEK 754
           ++S+L  LEK
Sbjct: 668 LRSQLSSLEK 677

This family consists of several plant proteins of unknown function. Length = 677

>gnl\|CDD\|220800 pfam10540, Membr_traf_MHD, Munc13 (mammalian uncoordinated) homology domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		990
PF05664		677	DUF810: Protein of unknown function (DUF810); Inte	100.0
KOG1011		1283	consensus Neurotransmitter release regulator, UNC-	99.95
KOG1328		1103	consensus Synaptic vesicle protein BAIAP3, involve	99.84
PF10540		137	Membr_traf_MHD: Munc13 (mammalian uncoordinated) h	99.68
PF06046		566	Sec6: Exocyst complex component Sec6; InterPro: IP	98.89
KOG2180		793	consensus Late Golgi protein sorting complex, subu	98.0
COG5173		742	SEC6 Exocyst complex subunit SEC6 [Intracellular t	97.0
KOG2286		667	consensus Exocyst complex subunit SEC6 [Intracellu	96.45
PF04091		311	Sec15: Exocyst complex subunit Sec15-like ; InterP	96.44
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	96.37
KOG3543		1218	consensus Ca2+-dependent activator protein [Signal	95.94

>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function	Back alignment and domain information

Probab=100.00  E-value=2.4e-182  Score=1608.11  Aligned_cols=657  Identities=59%  Similarity=0.958  Sum_probs=619.8

Q ss_pred             CCChhhHHHHHHHHHHHHhhcCCCCcccccCCCCCCCCCCCCCCCCCCCCCCcccccchhhhHhhHHHHHhCCCCCCCCC
Q 001964           46 QLSDSDLRLTAYEIFVAACRTSTGKPLSFIPNSNSSSDSPTHHNLSSPSHNSPTLQRSLTSAAASKMKKALGLKSPGSGS  125 (990)
Q Consensus        46 ~l~~~dlretayei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~k~~lg~~~~~~~~  125 (990)
                      ||||||||||||||||||||+|||  ++|++++     .+                     ...||+|||||||++++..
T Consensus         1 ~ls~~dlRetAYEi~~a~~~~s~~--~~~~~~~-----~~---------------------~~~s~~k~~lgl~~~~~~~   52 (677)
T PF05664_consen    1 GLSDDDLRETAYEILLASCRSSGG--LIYFSQS-----KK---------------------KEKSRVKKALGLKSSKSGS   52 (677)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccCC--CccCccc-----cc---------------------cchhHHHHHhcCCCCCCCC
Confidence            799999999999999999999965  8887641     21                     1239999999999988522


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHhhcccchhhhHHHHHHHHHHHHhhcccccceeechhhhhccCCCCCCChHHHH
Q 001964          126 KKSPGSGPGSGQGKSKKALTVGELMRTQMGVSETVDSRVRRALLRISAAQVGRKIESTVLPLELLQQLKYSDFTDQQEYD  205 (990)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~e~mr~Qm~Ise~~d~~~r~~llr~l~gq~g~r~~~~~LpLell~~l~~sDF~~~~~y~  205 (990)
                             .+++|+++|||+|++||||+||+|+|++|+||||+|||+++||+|||+|+++||||||++++++||+|++||+
T Consensus        53 -------~~~~~~~~~~~~~~~e~~r~qm~vse~~d~r~r~~l~~~~~~~~g~r~e~~~lpLeLl~~~~~sdF~d~~ey~  125 (677)
T PF05664_consen   53 -------SVSSPGRPRRPMTSAEIMRVQMRVSEQMDARIRRALLRAAAGQVGRRAESIVLPLELLQQLKPSDFSDEKEYE  125 (677)
T ss_pred             -------CCCCCCCCCCcchHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccccccccHHHHhhCCHhhCCCHHHHH
Confidence                   4578899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHhhCCCCCCCcCChHHHHHHHHhhh-----hcCCCCcccCchhhHHHHHhhhhhhcccC-CCC-CCC
Q 001964          206 AWQKRTLKLLEAGLLLHPRVPLDKSNIAAQRLRQIISA-----ALDRPIETGRNNESMQVLRSTVISLASRS-DGS-LNE  278 (990)
Q Consensus       206 ~Wqkrql~~leagL~~~P~~pl~ks~~~~~~Lr~~~~~-----s~~~~~~~~~~~e~~r~l~~~~~~La~rs-~~~-~~e  278 (990)
                      +|||||+++|||||++||.+|++|++..+++||++|+.     ++++|++||+++|+||+|+++|++||||+ .+| .+|
T Consensus       126 ~WqkRql~~Le~gL~~hp~~~l~~s~~~a~~lr~~~~~~~~~~~~~~~~~~~~~se~~~~l~~~~~~La~r~~~~~~~~e  205 (677)
T PF05664_consen  126 QWQKRQLKVLEAGLLNHPSVPLDKSNASAQRLRQIIAKIREDEAEDKPIDTGKNSESMRALRSAVISLAWRPSRDGSSGE  205 (677)
T ss_pred             HHHHHHHHHHHHHHHhCcCCCccccchhHHHHHHHHHhcccccccCCcCccccccHHHHHHHHHHHHHhcCCCCCCCCCc
Confidence            99999999999999999999999999999999999998     89999999999999999999999999995 556 899


Q ss_pred             CcccccCCCCCHHHHHHHHHHhhccCCCccchHHHHHHHHHHHhhhhccCCchhHHHHHHHHHHHHHHHhcCCCChhhHH
Q 001964          279 PCHWADGFPFNLRLYEMLLEACFDSSYETSIIEEVDELMEQIKKTWVILGMNQMLHNMCFTWVLFHRFVATGQADTDLLY  358 (990)
Q Consensus       279 ~~hwa~g~Pln~rlY~~LL~~~FD~~de~~l~~E~dElLe~lk~tW~~LGI~q~~h~vcf~wVlf~qfv~t~qie~dlL~  358 (990)
                      +||||||||+|+|||++||++|||++|||+|+||+||+||+||+||++|||||++||+||+||+|+|||+||  |+|||.
T Consensus       206 ~chWadgyplN~~LYe~LL~~~FD~~de~~vidE~dEvlellK~tW~~LGIt~~lHn~cf~WVlF~qyv~tg--e~~LL~  283 (677)
T PF05664_consen  206 TCHWADGYPLNVRLYEKLLFSVFDILDEGQVIDEVDEVLELLKKTWSILGITQTLHNVCFAWVLFRQYVATG--EPDLLK  283 (677)
T ss_pred             ccccccCCCccHHHHHHHHHHHhcccccchHHhhHHHHHHHHHHHhHHhCCCHHHHHHHHHHHHHHHHHhcC--CHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999  999999


Q ss_pred             HHHHHHHHHHhhhc-cCCChhhHH------------hHHHHHHhhHHHHHHHHhhHHhhhcCCchHHHHHHHHHHHHHhh
Q 001964          359 AADNQLAEVAKDAK-ATKDPEYAK------------ILSSTLTSIMSWAEKRLLAYHDTFDDGNLETMDGIVSLGVSSAK  425 (990)
Q Consensus       359 aa~~~l~ev~~d~k-~~~~~~y~~------------~l~s~l~~i~~W~~k~L~dyH~~f~~~~~~~me~i~~v~~~~~~  425 (990)
                      +|+++|++|+.|+| .++++.|.+            +|+|+|++|++|++|||+|||+||.+++++.|+++++|++.+++
T Consensus       284 ~a~~~L~ev~~d~~~~~~~~~y~~sl~~~~~~~~l~ll~s~L~si~~W~ekrL~dYH~~f~~~~~~~me~llsl~~~a~~  363 (677)
T PF05664_consen  284 AAIQQLQEVAKDAKRATKDPLYLKSLRCSVETSDLSLLSSVLSSIQGWAEKRLLDYHDHFSEGNIGVMEGLLSLAVSAAK  363 (677)
T ss_pred             HHHHHHHHHHHhccccccchhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHH
Confidence            99999999999988 699999999            99999999999999999999999999999999999999999999


Q ss_pred             hhhccchhhhhhcccCCCCchhhHHHHHHHHHHHHHHHHHHhhhccccccccCCCCChHHHHHHHHHHHHHHHHHHhhcc
Q 001964          426 ILTEDISNEYRRRRKGEVDVPRSRVETYIRSSLRTAFAQRMEKADSSRRASKNQPNPLPVLAILAKDVGELAIKERRVFS  505 (990)
Q Consensus       426 ~l~ed~~~~~~~~~~~~~~~~~~~v~~yIrsS~~~af~~~le~~~~~~~~~~~~~e~~~vL~~Lak~i~~La~ke~~~fS  505 (990)
                      |+++|++..++....   ..++++||.||++|+++||++..+..+++     .+.++.|+|++||++|++||.+|+++||
T Consensus       364 il~ed~~~~~~~~~~---~~~~~~ie~YIrsSi~~Af~~~~~~~~~~-----~~~~~~~~L~~LA~ei~~la~~e~~~Fs  435 (677)
T PF05664_consen  364 ILGEDVSREYRRKRS---KVARSRIESYIRSSIKAAFARMASSVDSR-----SDSEPSHVLAQLAKEIKELAKKEKEVFS  435 (677)
T ss_pred             HHhhchhHHHHhhhc---cchHHHHHHHHHHHHHHHHHhhhhhhhhc-----ccccchHHHHHHHHHHHHHHHHhHHhcC
Confidence            999999977764432   27899999999999999999988877766     3678999999999999999999999999


Q ss_pred             chhhhccccchhhhHHHHHHHHHhhHHHHHHHHHhhcHHHHHHhHHhhHHHHHHHHHhhhccccCCCCccccccCCCCcc
Q 001964          506 PILKRWHPLAAGVAVATLHACYGNEIKQFISSIVELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYE  585 (990)
Q Consensus       506 PiL~r~~P~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~lt~~~~~vl~aad~LEk~Lv~i~~e~~~~~~dg~~~l~~~~~Py~  585 (990)
                      |+|++|||.|++|||++||.|||++||+|+++++++|+++++|+++||+|||+|+||+   +++|||||++++++|+||+
T Consensus       436 PiLk~whP~a~~VAa~~LH~~Yg~~Lk~~L~~~~~LT~d~v~VL~aA~~LEk~Lvq~~---~~~~edggk~~~rem~Py~  512 (677)
T PF05664_consen  436 PILKRWHPNAAGVAAATLHSCYGNELKQFLSGVTHLTPDVVEVLQAADKLEKALVQMV---SVDCEDGGKSLIREMPPYE  512 (677)
T ss_pred             chhcccCchHHHHHHHHHHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHHH---HhhccccccccccCCCcee
Confidence            9999999999999999999999999999999999999999999999999999999999   7788999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhHHHHHHHhhhhccccccCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCCcccchHHHHHHHH
Q 001964          586 AEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQNQEGFASSAVEVLRIIDETLDAFFQLPIPMHPALLPDLMAGLD  665 (990)
Q Consensus       586 iE~~~~~~v~~Wi~~~~~ki~ewV~raiq~E~W~P~s~~e~hS~SvVDiFri~~etvd~ff~L~w~~~~~~l~~Ls~gl~  665 (990)
                      +|+++.+|||+||+++++++.+||+||+++|+|+|++++++||+|||||||||+||||+||+||||+++.+|++|++||+
T Consensus       513 vE~~i~~lv~~Wi~~~~~~l~ewv~ra~~qE~W~P~S~~e~hs~SvVEvfri~~eTvd~ff~L~~~~~~~~l~~L~~gld  592 (677)
T PF05664_consen  513 VESLISNLVKRWIQEQLERLNEWVDRAIKQEKWNPRSKEERHSPSVVEVFRIFNETVDQFFQLPWPMHADFLQALSKGLD  592 (677)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhccCCCCCccCCCcccccccccccccCceeeeeccHHHH
Q 001964          666 RCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWKKKEKSPNSQKKNSQVATMNGEISFRVPQLCIRINSFHRI  745 (990)
Q Consensus       666 ~~lq~Y~~~v~~~~g~ke~~iP~~P~LTR~~~~sk~~~~~Kk~~~p~~~~~e~~~~~~~~~~~s~~~~~lCVrLNnLeyi  745 (990)
                      ++||+||++|+++||++++|||++|+||||+++++|+++|||+..+...+.+....    ..+++++|++|||||||||+
T Consensus       593 ~~lq~Y~~~v~~~~gsk~~liP~~P~LTR~~~~sk~~~~~Kk~~~~~~~~~~~~~~----~~~~~~~~~lcVrLNtL~yi  668 (677)
T PF05664_consen  593 KALQRYCEKVEQSCGSKQSLIPPLPPLTRCKKDSKFKKLWKKKWKSSTNPDERFSS----KINSQFTPRLCVRLNTLEYI  668 (677)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCchhhhhhhhhhHHHHHHHHhcCcccccccccc----CcccCccCceeeeecHHHHH
Confidence            99999999999999999999999999999999999999999997555433333311    14578899999999999999


Q ss_pred             HHHHHHHHH
Q 001964          746 KSELDVLEK  754 (990)
Q Consensus       746 l~~Ld~LEk  754 (990)
                      ++||++|||
T Consensus       669 l~qL~~LEK  677 (677)
T PF05664_consen  669 LSQLDKLEK  677 (677)
T ss_pred             HHHHHhhcC
Confidence            999999996

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]	Back alignment and domain information

>PF10540 Membr_traf_MHD: Munc13 (mammalian uncoordinated) homology domain; InterPro: IPR019558 Mammalian uncoordinated homology 13 (Munc13) proteins constitute a family of three highly homologous molecules (Munc13-1, Munc13-2 and Munc13-3) with homology to Caenorhabditis elegans unc-13p	Back alignment and domain information

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		990
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	7e-35
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Length = 341	Back alignment and structure

 Score =  135 bits (340), Expect = 7e-35
 Identities = 53/361 (14%), Positives = 121/361 (33%), Gaps = 57/361 (15%)

Query: 593 LVKMWLKTRIDRLKEWVDRNLQQEDWNPQQ---NQEGFASSAVEVLRIIDETLDAFFQLP 649
            V  WL    +  ++++   L+++  +  Q       F+ S V+V   ++++ +   +L 
Sbjct: 14  FVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLE 73

Query: 650 IP---MHPALLPDLMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWK 706
            P   +    +      +   L  Y            +Y         C   +  Q +  
Sbjct: 74  CPDPQIVGHYMRRFAKTISNVLLQYADIVSK---DFASYCSKEKEKVPCILMNNTQQLRV 130

Query: 707 KKEKSPNSQKKNSQVATMNGEISFRVPQLCIRINSFHRIKSELDVLEKRVITHLRNCESA 766
           + EK   +         M G+                    ELD      +  L+   + 
Sbjct: 131 QLEKMFEA---------MGGK--------------------ELDAEASGTLKELQVKLNN 161

Query: 767 HAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSHVLWDGLYVGEPSSSRIEP 826
             ++ S+     F+     CV  +           V    +        V + + + ++P
Sbjct: 162 VLDELSHVFATSFQPHIEECVRQMGD-----ILSQVKGTGNVPASACSSVAQDADNVLQP 216

Query: 827 LLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVLLAGG------------PSRA 874
           ++  L+ NL + +    + V  R++ ++ K   +     ++                +++
Sbjct: 217 IMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVREEAKS 276

Query: 875 FTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDKFS--ATARGVLPLFRTDTESLIERFR 932
            T +   ++E    ++K  F A G GL    ++K     + R  L L+   T+ LI+ F 
Sbjct: 277 LTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFV 336

Query: 933 R 933
           +
Sbjct: 337 Q 337

PyMOL of 3swh

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		990
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	100.0
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	98.8
2a2f_X		325	Exocyst complex component SEC15; all helical struc	95.89
3hr0_A		263	COG4; conserved oligomeric golgi complex, intracel	92.28

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}	Back alignment and structure

Probab=100.00  E-value=7.1e-41  Score=373.34  Aligned_cols=294  Identities=16%  Similarity=0.279  Sum_probs=220.8

Q ss_pred             hhhhhHHHHHHHHHHHHhHHHHHHHhhhhccccccCC---CCCCCcchHHHHHHHHHHHHHHHhCCCCCC---cccchHH
Q 001964          586 AEGAIANLVKMWLKTRIDRLKEWVDRNLQQEDWNPQQ---NQEGFASSAVEVLRIIDETLDAFFQLPIPM---HPALLPD  659 (990)
Q Consensus       586 iE~~~~~~v~~Wi~~~~~ki~ewV~raiq~E~W~P~s---~~e~hS~SvVDiFri~~etvd~ff~L~w~~---~~~~l~~  659 (990)
                      .+.+|.+||++|+++..+++.+||++|++.|+|+|.+   ++.+||+||||+|++|+|+++.+.+|.||+   ...|++.
T Consensus         7 ~~~wF~~~V~~Wl~~~~~k~~~~v~~Ai~~Dk~~~~~~~~~~~~hSsSvvDif~~~~Q~~~~~~~L~WpD~~~~~~f~t~   86 (341)
T 3swh_A            7 YPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMRR   86 (341)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSSSCCSCTHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccCccccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence            3679999999999999999999999999999999986   678999999999999999999999999997   4789999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhccCCCCCccCCCcccccccccccccCceeeee
Q 001964          660 LMAGLDRCLQYYVTKAKSGCGSRNTYVPTMPALTRCTTGSKFQGVWKKKEKSPNSQKKNSQVATMNGEISFRVPQLCIRI  739 (990)
Q Consensus       660 Ls~gl~~~lq~Y~~~v~~~~g~ke~~iP~~P~LTR~~~~sk~~~~~Kk~~~p~~~~~e~~~~~~~~~~~s~~~~~lCVrL  739 (990)
                      |++.|.+++..||+.+....                      ...      ..       ..         +...+||.+
T Consensus        87 l~~~i~~~~~~Y~~~l~~~~----------------------~~~------~~-------~e---------~~~~~Cv~l  122 (341)
T 3swh_A           87 FAKTISNVLLQYADIVSKDF----------------------ASY------CS-------KE---------KEKVPCILM  122 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----------------------HHH------CC-------TT---------SCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH----------------------Hhh------hh-------hh---------cccchhhhc
Confidence            99999999999999996222                      100      00       00         022589999


Q ss_pred             ccHHHHHHHHHHHHHHHHhhhccCCCccccccCccccccccchHHHHHHHHHHHHHhhhheeeeecchh---hhhhhhcc
Q 001964          740 NSFHRIKSELDVLEKRVITHLRNCESAHAEDFSNGLGKKFELTPAACVEGVQQLSEAVAYKIVFHDLSH---VLWDGLYV  816 (990)
Q Consensus       740 NnLeyil~~Ld~LEk~I~~~~~~~~s~~~~~~~~~~~~~F~~ar~s~~~ai~~l~e~~a~rlVF~Dl~~---~l~~~LY~  816 (990)
                      ||++|++.+|.+|.+.+.  |..        .....+...+..+..++..+++++...+.|+. -+++.   -+-..|+.
T Consensus       123 NNie~lR~~L~~l~~~l~--~~~--------l~~~~~~~~~~lq~~l~~vl~~l~~~~~~~~~-~~i~~~v~~m~~~l~~  191 (341)
T 3swh_A          123 NNTQQLRVQLEKMFEAMG--GKE--------LDAEASGTLKELQVKLNNVLDELSHVFATSFQ-PHIEECVRQMGDILSQ  191 (341)
T ss_dssp             HHHHHHHHHHHHHHHHTT--TTT--------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHhcc--hhh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            999999999999998762  211        22234456677888888899998887777653 01111   00111221


Q ss_pred             --C--CC-----------CccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh------------cCC
Q 001964          817 --G--EP-----------SSSRIEPLLQELERNLLIISDTVHERVRTRIITDIMKASFDGFLLVL------------LAG  869 (990)
Q Consensus       817 --g--~V-----------~~~RI~plL~~Ld~~L~~l~~~l~d~~r~~vi~~vmkAs~~~fl~VL------------L~G  869 (990)
                        |  .+           .+.+|+|+++|||++|..+++++++++++++++++|++++++|+.++            ++|
T Consensus       192 i~~~~~~~~~~~~~~~~~~~~ai~PLm~yLd~~L~~l~~~L~~~~f~rvL~~lW~~~l~~l~~~i~lP~~~~~~~~~~~~  271 (341)
T 3swh_A          192 VKGTGNVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVR  271 (341)
T ss_dssp             CC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSSCC---
T ss_pred             hcccccCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhhHhhhcc
Confidence              1  11           15679999999999999999999999999999999999999999988            689


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHhhccCCCCCcHHHHHH--HHHHHhhcccccccChHHHHHHHHHH
Q 001964          870 GPSRAFTRQDSQIIEDDFKSLKDLFWANGDGLPIELIDK--FSATARGVLPLFRTDTESLIERFRRV  934 (990)
Q Consensus       870 GpsR~Fs~~D~~~iEeDl~~Lk~~F~a~GeGLp~e~ve~--~a~~v~~vl~L~~~~Te~LIe~~~~~  934 (990)
                      |+.|.|+++++++++++|+.|++||||+|+|||.+.+|+  +++.++++|.||.++|+.||+.|...
T Consensus       272 ~~~r~~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~~  338 (341)
T 3swh_A          272 EEAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQT  338 (341)
T ss_dssp             -------CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC--------------
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence            999999999999999999999999999999999999987  59999999999999999999998643

PyMOL of 3swh

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}	Back alignment and structure

>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}	Back alignment and structure

>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00