Citrus Sinensis ID: 002111

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-----
MAVSQFSSMSTRPSEALVQCTSSLSRFIEFGSRNRTSKQKLLLIRTFNSRPPTTSFCIKCVSSQPSPKTKDRVTEEDTSSSQNSSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP
cccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHcccHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHcccccccccccHHHHHHHHHHHHHccccccEEEEEEEccccccEEEccccccccccccccccccEEEEccccEEEEEEccEEEEcccccEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHHHHccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHccccHHHHHHHHHccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccHHHHHcccccccccccHHHHHccccHHccccccHHHHHHHHcccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHHccccccccccEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccc
ccccccccccccccccccccccccccEEEEEccccccccEEEEEEcccccccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccEEEEEcccEEEEccHHHHHHHcccHHHHHHHHHHccccHHHHHHHcccEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccEcccEEEEEccEEEEEccEcccccccccEEcHHHcEEEEEccEEEEcccccEEEEcccEEEEEEccccccccccccEcEEEEEEcccccccccHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHcccEEEEcccccHHHccEEEHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHcEEEEcccccccccccccEEEHHHHHHHHcccEEEccHHHHHHHHHcccHHHHHHcHHHEEEccccEcHHHHcccccHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHccEEEEccccccccccHHHHHHHHHccEEEEccccHHHHHHHHHcHHHcEEccccHHHHHHHcccccccHccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHEHHHHHHHHHHHcccccccccc
mavsqfssmstrpseaLVQCTSSLSRFIefgsrnrtsKQKLLLIRtfnsrppttsfcikcvssqpspktkdrvteedtsssqnssgpdtaSVASSIQYhaeftplfspekfeppkaffATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVvsqepdaalgngglgrlascfldsmatlnypawgyglrykyglfkqritKDGQEEVAEDWLelgnpweierndvsypvkfygkivpgsdgkshwiggedikavaydipipgyktkttinlrlwstmvpsedfdlsafnagdHTKAAEALTNAEKICYIlypgdesvegKVLRLKQQYTLCSASLQDIIARFEkrsganvnweeFPEKVAVQMndthptlciPELIRILIDLKGLSWKEAWNITQRTVaytnhtvlpEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSeygtadpdLLEKRLKETRilenvdlpatFADLFVKtkestdvvpddelencdeeggpvdeelesaqedgvleeekeaeavqeppqlvrMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPekfqnktngvtprrwirfcnpdlSSILTswlgtedwvTNTGKLAElrkfadneDLQSQFRAAKRNNKMKVVSFIKektgysvspdaMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVErkakfvprvcifggkaFATYVQAKRIVKFITdvgatvnhdpeigDLLKVIFVPDYNVSVAELLIPASELSQHIstagmeasgtsnmkFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRkersegkfvpdaRFEEVKKFVKSgvfgsynydelmgslegnegfgqadyflvgkdfpsyleCQEKVDEAYCDQKRWTRMSIMntagsskfssdRTIQEYARDIWNIIPVELP
mavsqfssmstrpseaLVQCTSSLSRFiefgsrnrtskqKLLLIRtfnsrppttsfcikcvssqpspktkdrvteedtsssqnssgpdTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWlelgnpweierndVSYPVKFYGKivpgsdgkshWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETrilenvdlpatFADLFVKTKestdvvpddelencdeeggpvdEELESAQEDGVLEEEKeaeavqeppqlVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSqfraakrnnkmkVVSFikektgysvspdAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLrkersegkfvpdarfeeVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSImntagsskfssdrtIQEYARDIwniipvelp
MAVSQFSSMSTRPSEALVQCTSSLSRFIEFGSRNRTSKQKLLLIRTFNSRPPTTSFCIKCVSSQPSPKTKDRVTEEDTSSSQNSSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDaalgngglgrlaSCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLeeekeaeavqeppqLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP
***********************LSRFIEFG*******QKLLLIRTFNSRPPTTSFCIKCV************************************YHAEFTPLFS***FEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVS***DAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKT*************************************************LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFAD***************KMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHI***********NMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE**EGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTA********RTIQEYARDIWNIIPV***
*******************************************************************************************VASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL*
*****************VQCTSSLSRFIEFGSRNRTSKQKLLLIRTFNSRPPTTSFCIKCV*******************************ASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDD***********************************EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAG********TIQEYARDIWNIIPVELP
***********************LSRFIEFGSRNRTSKQKLLLIRTFNS*P**TSFCIKC*************************GPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAVSQFSSMSTRPSEALVQCTSSLSRFIEFGSRNRTSKQKLLLIRTFNSRPPTTSFCIKCVSSQPSPKTKDRVTEEDTSSSQNSSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query965 2.2.26 [Sep-21-2011]
P535361003 Alpha-1,4 glucan phosphor N/A no 0.944 0.908 0.776 0.0
P04045966 Alpha-1,4 glucan phosphor N/A no 0.981 0.980 0.761 0.0
P27598955 Alpha-1,4 glucan phosphor N/A no 0.949 0.959 0.786 0.0
Q9LIB2962 Alpha-glucan phosphorylas yes no 0.990 0.993 0.764 0.0
P53535974 Alpha-1,4 glucan phosphor N/A no 0.934 0.926 0.755 0.0
Q9LKJ3832 Alpha-glucan phosphorylas N/A no 0.843 0.978 0.584 0.0
Q9SD76841 Alpha-glucan phosphorylas no no 0.855 0.982 0.588 0.0
P53537842 Alpha-glucan phosphorylas N/A no 0.842 0.965 0.598 0.0
P32811838 Alpha-glucan phosphorylas N/A no 0.843 0.971 0.587 0.0
P34114993 Glycogen phosphorylase 2 yes no 0.821 0.798 0.450 0.0
>sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2 Back     alignment and function desciption
 Score = 1546 bits (4003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/945 (77%), Positives = 831/945 (87%), Gaps = 34/945 (3%)

Query: 54   TSFCIKCVS-SQPSPKTKDRVTEEDTSSSQNSSGPDTASVASSIQYHAEFTPLFSPEKFE 112
            ++F +KC S ++   K KD+  +++  +S +S  PDT S+ SSI+YHAEFTPLFSPEKFE
Sbjct: 58   SAFSVKCGSGNEAKQKVKDQEVQQEAKTSPSSFAPDTTSIVSSIKYHAEFTPLFSPEKFE 117

Query: 113  PPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGA 172
             P+AF ATAQSVRD+LIINWN+TY+YYE+LNVKQAYYLSMEFLQGRALLNAIGNL LTG 
Sbjct: 118  LPQAFIATAQSVRDALIINWNATYDYYEKLNVKQAYYLSMEFLQGRALLNAIGNLELTGP 177

Query: 173  YAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFK 232
            YAEALS+L   LE+V  QEPDAALGNGGLGRLASCFLDS+ATLNYPAWGYGLRYKYGLFK
Sbjct: 178  YAEALSQLSYKLEDVAHQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFK 237

Query: 233  QRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAY 292
            QRITKDGQEEVAEDWLE+GNPWEI RNDVSYPV+FYGK+V GSDGK HW+GGEDIKAVA+
Sbjct: 238  QRITKDGQEEVAEDWLEMGNPWEIVRNDVSYPVRFYGKVVSGSDGKKHWVGGEDIKAVAH 297

Query: 293  DIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDES 352
            D+PIPGYKT++TINLRLWST   SE+FDL+AFN+G HT+A+EAL NAEKICYILYPGDES
Sbjct: 298  DVPIPGYKTRSTINLRLWSTKAASEEFDLNAFNSGRHTEASEALANAEKICYILYPGDES 357

Query: 353  VEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELI 412
            +EGK LRLKQQYTLCSASLQDIIARFE+RSGA+VNWE+FPEKVAVQMNDTHPTLCIPEL+
Sbjct: 358  IEGKTLRLKQQYTLCSASLQDIIARFERRSGASVNWEDFPEKVAVQMNDTHPTLCIPELM 417

Query: 413  RILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEEL 472
            RILID+KGLSWK+AWNITQRTVAYTNHTVLPEALEKWS +LM+KLLPRH+EIIEMIDEEL
Sbjct: 418  RILIDIKGLSWKDAWNITQRTVAYTNHTVLPEALEKWSMDLMEKLLPRHVEIIEMIDEEL 477

Query: 473  VHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDD-------- 524
            + TI++EYGTAD DLL+K+LKE RILENV+LPA FAD+ VKTKE+TD+  ++        
Sbjct: 478  IRTIIAEYGTADSDLLDKKLKEMRILENVELPAEFADILVKTKEATDISSEEVQISKEGG 537

Query: 525  -----------------ELENCDEEGGPVDEELESA--QEDGVLE------EEKEAEAVQ 559
                                  +E     ++E+E A  ++DG ++      ++K  E V 
Sbjct: 538  EEEETSKEGGEEEEEKEVGGGREEGDDGKEDEVEKAIAEKDGTVKSSIGDKKKKLPEPVP 597

Query: 560  EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIR 619
             PP+LVRMANLCVVG HAVNGVAEIHSEIV ++VFN FYKLWPEKFQNKTNGVTPRRWIR
Sbjct: 598  VPPKLVRMANLCVVGGHAVNGVAEIHSEIVKDDVFNAFYKLWPEKFQNKTNGVTPRRWIR 657

Query: 620  FCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEK 679
            FCNPDLS I+T W+GTEDW+ NT KLAELRKFADNEDLQ+Q+R AKRNNK+KV +F++E+
Sbjct: 658  FCNPDLSKIITQWIGTEDWILNTEKLAELRKFADNEDLQTQWREAKRNNKVKVAAFLRER 717

Query: 680  TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK 739
            TGYSVSPD+MFDIQVKRIHEYKRQL+NI GIVYRYKKMKEM+A ERK  FVPRVCIFGGK
Sbjct: 718  TGYSVSPDSMFDIQVKRIHEYKRQLLNIFGIVYRYKKMKEMNAAERKENFVPRVCIFGGK 777

Query: 740  AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 799
            AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAE+LIPASELSQHIST
Sbjct: 778  AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAEMLIPASELSQHIST 837

Query: 800  AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG 859
            AGMEASGTSNMKFAMNGC+ IGTLDGANVEIR+EVG +NFFLFGA+A EI GLRKER+ G
Sbjct: 838  AGMEASGTSNMKFAMNGCLQIGTLDGANVEIREEVGADNFFLFGAKAREIVGLRKERARG 897

Query: 860  KFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 919
            KFVPD RFEEVKKFV+SGVFGSYNYDEL+GSLEGNEGFG+ADYFLVG+DFPSYLECQE+V
Sbjct: 898  KFVPDPRFEEVKKFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGQDFPSYLECQEEV 957

Query: 920  DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 964
            D+AY DQK+WTRMSI+NTAGSSKFSSDRTI EYAR+IWNI PV+L
Sbjct: 958  DKAYRDQKKWTRMSILNTAGSSKFSSDRTIHEYAREIWNIEPVKL 1002
The L isoform exhibits higher affinity for unbranched substrates such as glucan-like amylose and maltodextrin.
Vicia faba (taxid: 3906)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1
>sp|P04045|PHSL1_SOLTU Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2 Back     alignment and function description
>sp|P27598|PHSL_IPOBA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1 Back     alignment and function description
>sp|Q9LIB2|PHS1_ARATH Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1 Back     alignment and function description
>sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1 Back     alignment and function description
>sp|Q9SD76|PHS2_ARATH Alpha-glucan phosphorylase 2, cytosolic OS=Arabidopsis thaliana GN=PHS2 PE=2 SV=1 Back     alignment and function description
>sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1 Back     alignment and function description
>sp|P32811|PHSH_SOLTU Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1 Back     alignment and function description
>sp|P34114|PHS2_DICDI Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query965
255570250977 glycogen phosphorylase, putative [Ricinu 0.980 0.968 0.796 0.0
211906528935 alpha-1,4 glucan phosphorylase [Gossypiu 0.945 0.975 0.798 0.0
356551144978 PREDICTED: alpha-1,4 glucan phosphorylas 0.995 0.982 0.785 0.0
359489019982 PREDICTED: alpha-1,4 glucan phosphorylas 0.977 0.960 0.786 0.0
224077696949 predicted protein [Populus trichocarpa] 0.946 0.962 0.798 0.0
25064701003 RecName: Full=Alpha-1,4 glucan phosphory 0.944 0.908 0.776 0.0
356573281922 PREDICTED: alpha-1,4 glucan phosphorylas 0.939 0.983 0.816 0.0
449438839964 PREDICTED: alpha-1,4 glucan phosphorylas 0.989 0.990 0.759 0.0
130173966 RecName: Full=Alpha-1,4 glucan phosphory 0.981 0.980 0.761 0.0
21579966 unnamed protein product [Solanum tuberos 0.981 0.980 0.760 0.0
>gi|255570250|ref|XP_002526085.1| glycogen phosphorylase, putative [Ricinus communis] gi|223534582|gb|EEF36279.1| glycogen phosphorylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1608 bits (4165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 767/963 (79%), Positives = 855/963 (88%), Gaps = 17/963 (1%)

Query: 19  QCTSSLSRFIEFGSRNRTS-KQKLLLIRTFNSRPPTTSFCIKCVSSQPSPKTKDRVTEED 77
           QC S +SRF+ FG+++ +  +  LLLIRTF SRP +TSF ++ VS++P  K  D ++ E 
Sbjct: 16  QC-SGVSRFVHFGAKSSSKWRSNLLLIRTFRSRPVSTSFSVRNVSTEPKTKIVDSLSHEA 74

Query: 78  TSSSQNSSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYE 137
             S+++    D++S+ASSI+YHAEFTP FSPE+FE PKAFFATAQSVRDSLIINWNSTYE
Sbjct: 75  APSNRSLFNLDSSSIASSIKYHAEFTPSFSPEQFELPKAFFATAQSVRDSLIINWNSTYE 134

Query: 138 YYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALG 197
           YYE+LNVKQAYY+SMEFLQGRALLNA+GNL LTGAYAEAL+KLG +LENV  QEPDAALG
Sbjct: 135 YYEKLNVKQAYYMSMEFLQGRALLNAVGNLELTGAYAEALTKLGHNLENVARQEPDAALG 194

Query: 198 NGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIE 257
           NGGLGRLASCFLDS+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI 
Sbjct: 195 NGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIV 254

Query: 258 RNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSE 317
           RNDV+YPVKFYGK+V GSDG+ HWIGGEDIKAVAYD+PIPGYKTK+TINLRLWST  P+E
Sbjct: 255 RNDVAYPVKFYGKVVSGSDGRKHWIGGEDIKAVAYDVPIPGYKTKSTINLRLWSTKAPAE 314

Query: 318 DFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIAR 377
           D DLSAFN+GDHTKA E L NAEKIC+ILYPGD+SVEGK+LRLKQQYTLCSASLQDII R
Sbjct: 315 DLDLSAFNSGDHTKAYETLANAEKICHILYPGDDSVEGKILRLKQQYTLCSASLQDIIVR 374

Query: 378 FEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYT 437
           FE+RSG++V WEEFPEKVAVQMNDTHPTLCIPEL+RIL+DLKGLSWKEAWNITQRTVAYT
Sbjct: 375 FERRSGSHVKWEEFPEKVAVQMNDTHPTLCIPELMRILMDLKGLSWKEAWNITQRTVAYT 434

Query: 438 NHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRI 497
           NHTVLPEALEKWS +LMQKLLPRH+EIIEMIDEEL+ TIVSEYG  D DLL K+LKE RI
Sbjct: 435 NHTVLPEALEKWSLDLMQKLLPRHVEIIEMIDEELIRTIVSEYGREDLDLLNKKLKEMRI 494

Query: 498 LENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDE--ELESAQEDGVLEE---- 551
           LENVDLP  FADL +KTKES+      E E+ D+E   V+E  ELES +E    +E    
Sbjct: 495 LENVDLPDAFADLIIKTKESSAASTTKEPEDADDEIKLVNEKDELESKEESENKDEAERK 554

Query: 552 ---------EKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWP 602
                    +KE   V+ PP++VRMANLCVVG HAVNGVAEIHSEIV +EVFN FY+LWP
Sbjct: 555 DELENKNTQKKEKAVVEPPPKMVRMANLCVVGGHAVNGVAEIHSEIVKDEVFNVFYQLWP 614

Query: 603 EKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFR 662
           +KFQNKTNGVTPRRWIRFCNPDLS I+T W G+EDWV NT KLAELRKF+DNEDLQ+Q+R
Sbjct: 615 KKFQNKTNGVTPRRWIRFCNPDLSKIITDWTGSEDWVLNTEKLAELRKFSDNEDLQTQWR 674

Query: 663 AAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSA 722
           AAKR+NKMKVV  IKEKTGYSVS DAMFDIQVKRIHEYKRQL+NILGIVYRYKKMKEMSA
Sbjct: 675 AAKRSNKMKVVQLIKEKTGYSVSTDAMFDIQVKRIHEYKRQLLNILGIVYRYKKMKEMSA 734

Query: 723 VERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVS 782
            ERK ++VPRVCIFGGKAFATY+QAKRIVKFITDVGATVNHDPEIGDLLKV+FVP+YNVS
Sbjct: 735 AERKKEYVPRVCIFGGKAFATYLQAKRIVKFITDVGATVNHDPEIGDLLKVVFVPNYNVS 794

Query: 783 VAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842
           VAELLIPASELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR+EVGE+NFFLF
Sbjct: 795 VAELLIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIRKEVGEDNFFLF 854

Query: 843 GARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADY 902
           GA+AHEIAGLRKER+EGKFVPD RFEEVK+FV+SGVFG+Y+YDEL+GSLEGNEGFG+ DY
Sbjct: 855 GAKAHEIAGLRKERAEGKFVPDPRFEEVKEFVRSGVFGTYDYDELLGSLEGNEGFGRGDY 914

Query: 903 FLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 962
           FLVGKDFPSYLECQEKVD+AY DQKRWT+MSIMNTAGS  FSSDRTI EYARDIWNI PV
Sbjct: 915 FLVGKDFPSYLECQEKVDKAYRDQKRWTKMSIMNTAGSYYFSSDRTIHEYARDIWNIEPV 974

Query: 963 ELP 965
            LP
Sbjct: 975 ILP 977

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|211906528|gb|ACJ11757.1| alpha-1,4 glucan phosphorylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|356551144|ref|XP_003543938.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|359489019|ref|XP_002279075.2| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Vitis vinifera] gi|296082990|emb|CBI22291.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224077696|ref|XP_002305367.1| predicted protein [Populus trichocarpa] gi|222848331|gb|EEE85878.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|2506470|sp|P53536.2|PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|1616637|emb|CAA85354.1| alpha-1,4 glucan phosphorylase, L isoform precursor [Vicia faba var. minor] Back     alignment and taxonomy information
>gi|356573281|ref|XP_003554791.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|449438839|ref|XP_004137195.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|130173|sp|P04045.2|PHSL1_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-1; Flags: Precursor gi|217999|dbj|BAA00407.1| alpha-glucan phosphorylase precursor [Solanum tuberosum] Back     alignment and taxonomy information
>gi|21579|emb|CAA36612.1| unnamed protein product [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query965
TAIR|locus:2093787962 PHS1 "alpha-glucan phosphoryla 0.988 0.991 0.752 0.0
UNIPROTKB|P04045966 P04045 "Alpha-1,4 glucan phosp 0.985 0.984 0.748 0.0
TAIR|locus:2075576841 PHS2 "alpha-glucan phosphoryla 0.415 0.476 0.669 2.3e-282
DICTYBASE|DDB_G0281383853 glpV "glycogen phosphorylase b 0.407 0.460 0.503 1.6e-208
ASPGD|ASPL0000059322879 AN1015 [Emericella nidulans (t 0.407 0.447 0.501 9.2e-202
DICTYBASE|DDB_G0291123993 glpD "glycogen phosphorylase a 0.397 0.386 0.489 2.2e-200
UNIPROTKB|G4MW66888 MGG_01819 "Phosphorylase" [Mag 0.409 0.444 0.485 1.4e-198
UNIPROTKB|P53535974 STP-1 "Alpha-1,4 glucan phosph 0.538 0.533 0.674 1.2e-191
SGD|S000006364902 GPH1 "Glycogen phosphorylase r 0.409 0.437 0.461 9.7e-189
CGD|CAL0001970900 GPH1 [Candida albicans (taxid: 0.406 0.435 0.474 1.2e-188
TAIR|locus:2093787 PHS1 "alpha-glucan phosphorylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3755 (1326.9 bits), Expect = 0., P = 0.
 Identities = 732/973 (75%), Positives = 813/973 (83%)

Query:     1 MAVSQFSSMSTRPSEALVQCTSSLSRFIEFGSRNRTSKQKLLLIRTFNSRP-PTT-SFC- 57
             M   + S +ST  +E L+QC +SLS  +     +   + ++   R  + RP PT  SF  
Sbjct:     1 MDTMRISGVSTG-AEVLIQC-NSLSSLVSRRCDDGKWRTRMFPARNRDLRPSPTRRSFLS 58

Query:    58 IKCVSSQPSPKTKDRVTEEDTS---SSQNSSGPDTASVASSIQYHAEFTPLFSPEKFEPP 114
             +K +SS+P  K  D V + +     SS N   PD ASVASSI+YHAEFTPLFSPEKFE P
Sbjct:    59 VKSISSEPKAKVTDAVLDSEQEVFISSMNPFAPDAASVASSIKYHAEFTPLFSPEKFELP 118

Query:   115 KAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYA 174
             KAFFATAQSVRD+LI+NWN+TYEYY R+NVKQAYYLSMEFLQGRAL NA+GNLGL  AY 
Sbjct:   119 KAFFATAQSVRDALIMNWNATYEYYNRVNVKQAYYLSMEFLQGRALSNAVGNLGLNSAYG 178

Query:   175 EALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYPAWGYGLRYKYGLFKQR 234
             +AL +LG  LE+V SQEPD            SCFLDSMATLNYPAWGYGLRYKYGLFKQR
Sbjct:   179 DALKRLGFDLESVASQEPDPALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQR 238

Query:   235 ITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDI 294
             ITKDGQEE AEDWLEL NPWEI RNDVSYP+KFYGK+V GSDGK  WIGGEDI AVAYD+
Sbjct:   239 ITKDGQEEAAEDWLELSNPWEIVRNDVSYPIKFYGKVVFGSDGKKRWIGGEDIVAVAYDV 298

Query:   295 PIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVE 354
             PIPGYKTKTTINLRLWST  PSEDFDLS++N+G HT+AAEAL NAEKIC++LYPGDES E
Sbjct:   299 PIPGYKTKTTINLRLWSTKAPSEDFDLSSYNSGKHTEAAEALFNAEKICFVLYPGDESTE 358

Query:   355 GKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRI 414
             GK LRLKQQYTLCSASLQDI+ARFE RSG NVNWEEFPEKVAVQMNDTHPTLCIPEL+RI
Sbjct:   359 GKALRLKQQYTLCSASLQDIVARFETRSGGNVNWEEFPEKVAVQMNDTHPTLCIPELMRI 418

Query:   415 LIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVH 474
             L+DLKGLSW++AW ITQRTVAYTNHTVLPEALEKWS ELM+KLLPRH+EIIE IDEELV 
Sbjct:   419 LMDLKGLSWEDAWKITQRTVAYTNHTVLPEALEKWSLELMEKLLPRHVEIIEKIDEELVR 478

Query:   475 TIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDE--LENCDEE 532
             TIVSEYGTADPDLLE++LK  RILENV+LP+ FAD+ VK         D +  ++   EE
Sbjct:   479 TIVSEYGTADPDLLEEKLKAMRILENVELPSAFADVIVKPVNKPVTAKDAQNGVKTEQEE 538

Query:   533 GGPVDEELESAQEDGVLXXXXXXXXXXXXXXLVRMANLCVVGSHAVNGVAEIHSEIVTNE 592
                  EE    +ED V+              +VRMANL VVG HAVNGVAEIHSEIV  +
Sbjct:   539 EKTAGEE----EEDEVIPEPTVEPPK-----MVRMANLAVVGGHAVNGVAEIHSEIVKQD 589

Query:   593 VFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFA 652
             VFN+F +LWPEKFQNKTNGVTPRRWIRFCNP LS I+T+W+GTEDWV NT K+AELRKFA
Sbjct:   590 VFNDFVQLWPEKFQNKTNGVTPRRWIRFCNPYLSDIITNWIGTEDWVLNTEKVAELRKFA 649

Query:   653 DNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVY 712
             DNEDLQS++RAAK+ NK+KVVS IKE+TGY+VSPDAMFDIQ+KRIHEYKRQL+NILGIVY
Sbjct:   650 DNEDLQSEWRAAKKKNKLKVVSLIKERTGYTVSPDAMFDIQIKRIHEYKRQLLNILGIVY 709

Query:   713 RYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLK 772
             RYKKMKEMSA ER+  FVPRVCIFGGKAFATYVQAKRIVKFITDV +T+NHDPEIGDLLK
Sbjct:   710 RYKKMKEMSASEREKAFVPRVCIFGGKAFATYVQAKRIVKFITDVASTINHDPEIGDLLK 769

Query:   773 VIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 832
             VIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR+
Sbjct:   770 VIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIRE 829

Query:   833 EVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLE 892
             EVGEENFFLFGA+A +I  LRKER+EGKFVPD  FEEVKKFV SGVFGS +YDEL+GSLE
Sbjct:   830 EVGEENFFLFGAKADQIVNLRKERAEGKFVPDPTFEEVKKFVGSGVFGSNSYDELIGSLE 889

Query:   893 GNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 952
             GNEGFG+ADYFLVGKDFPSY+ECQEKVDEAY DQKRWTRMSIMNTAGS KFSSDRTI EY
Sbjct:   890 GNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTRMSIMNTAGSFKFSSDRTIHEY 949

Query:   953 ARDIWNIIPVELP 965
             A+DIWNI  VELP
Sbjct:   950 AKDIWNIKQVELP 962
GO:0004645 "phosphorylase activity" evidence=IEA;ISS;IMP
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0030170 "pyridoxal phosphate binding" evidence=IEA
GO:0009414 "response to water deprivation" evidence=IMP
GO:0009536 "plastid" evidence=TAS
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009266 "response to temperature stimulus" evidence=IEP
GO:0005829 "cytosol" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
UNIPROTKB|P04045 P04045 "Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
TAIR|locus:2075576 PHS2 "alpha-glucan phosphorylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281383 glpV "glycogen phosphorylase b" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000059322 AN1015 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291123 glpD "glycogen phosphorylase a" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|G4MW66 MGG_01819 "Phosphorylase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|P53535 STP-1 "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
SGD|S000006364 GPH1 "Glycogen phosphorylase required for the mobilization of glycogen" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0001970 GPH1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ET01PYGL_MOUSE2, ., 4, ., 1, ., 10.43090.83210.9447yesno
P06737PYGL_HUMAN2, ., 4, ., 1, ., 10.41920.83100.9468yesno
P0AC87PHSG_SHIFL2, ., 4, ., 1, ., 10.40970.82170.9730yesno
P27598PHSL_IPOBA2, ., 4, ., 1, ., 10.78620.94920.9591N/Ano
Q9CN90PHSG_PASMU2, ., 4, ., 1, ., 10.41000.82170.9694yesno
Q9LIB2PHS1_ARATH2, ., 4, ., 1, ., 10.76410.99060.9937yesno
Q9LKJ3PHSH_WHEAT2, ., 4, ., 1, ., 10.58400.84350.9783N/Ano
P53535PHSL2_SOLTU2, ., 4, ., 1, ., 10.75510.93470.9260N/Ano
P53536PHSL_VICFA2, ., 4, ., 1, ., 10.77670.94400.9082N/Ano
P53537PHSH_VICFA2, ., 4, ., 1, ., 10.59840.84240.9655N/Ano
P32811PHSH_SOLTU2, ., 4, ., 1, ., 10.58790.84350.9713N/Ano
P04045PHSL1_SOLTU2, ., 4, ., 1, ., 10.76180.98130.9803N/Ano
P09811PYGL_RAT2, ., 4, ., 1, ., 10.43320.83210.9447yesno
Q0VCM4PYGL_BOVIN2, ., 4, ., 1, ., 10.43840.83100.9424yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.10.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_IV0101
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (950 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00280310
SubName- Full=Starch branching enzyme II; (730 aa)
• •• •• 0.970
fgenesh4_pg.C_LG_V001651
SubName- Full=Starch branching enzyme I; (701 aa)
•  • •• 0.954
gw1.XV.361.1
hypothetical protein (586 aa)
• •  •• 0.951
gw1.164.92.1
hypothetical protein (387 aa)
• •  •• 0.943
fgenesh4_pm.C_LG_XIV000240
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (445 aa)
• •  •• 0.935
gw1.XVII.1126.1
hypothetical protein (688 aa)
• •  •• 0.934
gw1.V.1420.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (475 aa)
• •  •• 0.933
gw1.170.63.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27) (428 aa)
• •  •• 0.929
gw1.VII.320.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27) (434 aa)
• •  •• 0.928
estExt_fgenesh4_pm.C_LG_II0158
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)
• •  •• 0.928

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query965
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 0.0
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 0.0
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 0.0
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 0.0
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 0.0
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 0.0
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 0.0
TIGR02094601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 1e-18
TIGR02094601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 2e-13
cd04299778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 3e-12
cd04299778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 3e-09
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information 
 Score = 1069 bits (2767), Expect = 0.0
 Identities = 400/872 (45%), Positives = 531/872 (60%), Gaps = 86/872 (9%)

Query: 96  IQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFL 155
           I YH E+T   + +   P   + A A++VRD L+  W  T E Y   N KQ YYLS EFL
Sbjct: 1   ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFL 60

Query: 156 QGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATL 215
            GR L N + NLGL     EAL +LG  LE ++  E DA LGNGGLGRLA+CFLDS+ATL
Sbjct: 61  MGRLLGNNLLNLGLYDEVKEALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATL 120

Query: 216 NYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGS 275
             PA GYG+RY+YGLFKQ+I    Q E+ +DWL  GNPWEI R D SY V+F G++    
Sbjct: 121 GLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQP 180

Query: 276 DGKSH---WIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKA 332
           D       W+  E + A+ YD+P+PGY+T T   LRLWS     E+FDL AFNAGD+ +A
Sbjct: 181 DSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEA 239

Query: 333 AEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFP 392
            E    AE I  +LYP D + EGK LRLKQQY   SASLQDII R  +      +  +FP
Sbjct: 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETHP---DLSDFP 296

Query: 393 EKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFE 452
           +KVA+Q+NDTHP L IPEL+R+LID +G+ W EAW+IT +T AYTNHT            
Sbjct: 297 KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHT------------ 344

Query: 453 LMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFV 512
               LLP   E +E    +L   ++       P  LE       I+  ++        F+
Sbjct: 345 ----LLP---EALEKWPVDLFQKLL-------PRHLE-------IIYEIN------RRFL 377

Query: 513 KTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCV 572
               +                GP DE          + EE +++ V       RMANL +
Sbjct: 378 AELAAK---------------GPGDEAK---IRRMSIIEEGQSKRV-------RMANLAI 412

Query: 573 VGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSW 632
           VGSH+VNGVA +H+E++  ++  +FY+L+PEKF NKTNG+TPRRW+R  NP LS++LT  
Sbjct: 413 VGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTET 472

Query: 633 LGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDI 692
           +G +DW+T+   L +L  +AD+ +   +FR  K+ NK ++ ++IKE TG  V P+++FD+
Sbjct: 473 IG-DDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDV 531

Query: 693 QVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVK 752
           QVKR+HEYKRQL+N+L ++Y Y ++KE          VPR  IFGGKA   Y  AK I+K
Sbjct: 532 QVKRLHEYKRQLLNVLHVIYLYNRIKEDPP----KDIVPRTVIFGGKAAPGYHMAKLIIK 587

Query: 753 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKF 812
            I  V   VN+DP +GD LKV+FVP+YNVS+AEL+IPA++LS+ ISTAG EASGT NMKF
Sbjct: 588 LINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKF 647

Query: 813 AMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEV 870
            +NG + IGTLDGANVEIR+EVG EN F+FG    E+  LR++       +  D   + V
Sbjct: 648 MLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNPREYYEADPELKRV 707

Query: 871 KKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK 927
              + SG F   +   +  L  SL  +      D F V  DF +Y++ QE+VD  Y DQ 
Sbjct: 708 LDLISSGTFSPGDPGLFRPLYDSLLNHG-----DPFFVLADFAAYVDAQERVDALYRDQL 762

Query: 928 RWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 959
            WT+ SI+N A S KFSSDRTI+EYA++IW++
Sbjct: 763 EWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 794
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 965
KOG2099843 consensus Glycogen phosphorylase [Carbohydrate tra 100.0
TIGR02093794 P_ylase glycogen/starch/alpha-glucan phosphorylase 100.0
PRK14985798 maltodextrin phosphorylase; Provisional 100.0
cd04300797 GT1_Glycogen_Phosphorylase This is a family of oli 100.0
PRK14986815 glycogen phosphorylase; Provisional 100.0
PF00343713 Phosphorylase: Carbohydrate phosphorylase; InterPr 100.0
COG0058750 GlgP Glucan phosphorylase [Carbohydrate transport 100.0
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 99.81
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 99.73
PRK00654466 glgA glycogen synthase; Provisional 99.65
PRK14098489 glycogen synthase; Provisional 99.64
PLN02939977 transferase, transferring glycosyl groups 99.5
PRK14099485 glycogen synthase; Provisional 99.4
PLN023161036 synthase/transferase 98.69
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 98.25
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 97.0
PLN00142815 sucrose synthase 96.92
TIGR02470784 sucr_synth sucrose synthase. This model represents 96.91
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 96.88
cd03821375 GT1_Bme6_like This family is most closely related 96.85
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 96.78
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 96.73
cd03805392 GT1_ALG2_like This family is most closely related 96.61
cd03808359 GT1_cap1E_like This family is most closely related 96.55
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 96.49
cd03813475 GT1_like_3 This family is most closely related to 96.45
cd03800398 GT1_Sucrose_synthase This family is most closely r 96.34
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 96.31
cd03796398 GT1_PIG-A_like This family is most closely related 96.2
cd03818396 GT1_ExpC_like This family is most closely related 96.03
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 96.0
cd03807365 GT1_WbnK_like This family is most closely related 95.98
cd04962371 GT1_like_5 This family is most closely related to 95.9
cd03822366 GT1_ecORF704_like This family is most closely rela 95.87
cd03809365 GT1_mtfB_like This family is most closely related 95.84
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 95.81
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 95.81
cd03795357 GT1_like_4 This family is most closely related to 95.54
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 95.23
cd04949372 GT1_gtfA_like This family is most closely related 95.2
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 95.19
PLN02949463 transferase, transferring glycosyl groups 95.05
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 94.93
cd03817374 GT1_UGDG_like This family is most closely related 94.6
cd03804351 GT1_wbaZ_like This family is most closely related 94.58
PF11897118 DUF3417: Protein of unknown function (DUF3417); In 94.56
cd03794394 GT1_wbuB_like This family is most closely related 94.56
cd03819355 GT1_WavL_like This family is most closely related 94.55
cd03801374 GT1_YqgM_like This family is most closely related 94.51
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 94.48
cd03811353 GT1_WabH_like This family is most closely related 94.43
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 94.14
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 93.59
cd03825365 GT1_wcfI_like This family is most closely related 93.3
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 93.28
cd03812358 GT1_CapH_like This family is most closely related 93.14
cd03806419 GT1_ALG11_like This family is most closely related 93.0
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 92.95
cd03814364 GT1_like_2 This family is most closely related to 92.57
cd03820348 GT1_amsD_like This family is most closely related 91.76
cd03798377 GT1_wlbH_like This family is most closely related 91.75
cd04955363 GT1_like_6 This family is most closely related to 90.98
cd03823359 GT1_ExpE7_like This family is most closely related 90.92
PRK10307412 putative glycosyl transferase; Provisional 90.38
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 90.13
cd03802335 GT1_AviGT4_like This family is most closely relate 90.09
cd03816415 GT1_ALG1_like This family is most closely related 89.28
cd04946407 GT1_AmsK_like This family is most closely related 87.34
PHA01630331 putative group 1 glycosyl transferase 85.62
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 83.87
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-292  Score=2392.25  Aligned_cols=806  Identities=54%  Similarity=0.926  Sum_probs=781.8

Q ss_pred             CCCCCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHH
Q 002111           84 SSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNA  163 (965)
Q Consensus        84 ~~~~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nn  163 (965)
                      ....++.+++++|.+|+++++.+++..|++.+.|.|||.+|||.|+.+|++|+++|.+.++||||||||||+|||+|.|+
T Consensus        20 ~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvYYLSlEf~mGRaL~Nt   99 (843)
T KOG2099|consen   20 AGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVYYLSLEFYMGRALQNT   99 (843)
T ss_pred             cCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeEeehHHhhhhHHHHH
Confidence            33467889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeee
Q 002111          164 IGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEV  243 (965)
Q Consensus       164 L~NLgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~  243 (965)
                      ++||||.++|.|||.+||+|+|+|+++|+|||||||||||||+||||||||||+|+|||||||+||+|+|+|++|||+|.
T Consensus       100 m~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF~QkI~~g~Q~E~  179 (843)
T KOG2099|consen  100 MINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIFKQKITDGWQVEE  179 (843)
T ss_pred             HHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhHHHHhcCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccc
Q 002111          244 AEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSA  323 (965)
Q Consensus       244 pd~Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~  323 (965)
                      ||+||+.|||||+.|+++++||+|||+|+..++| .+|++++.|.|+|||+|||||+|++||+||||+|+ ++++|||..
T Consensus       180 ~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWsak-a~~df~l~~  257 (843)
T KOG2099|consen  180 PDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWSAK-APNDFDLKD  257 (843)
T ss_pred             hHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeeccC-CCCCCCHHh
Confidence            9999999999999999999999999999988888 57999999999999999999999999999999999 777999999


Q ss_pred             cCCCchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCccc-----ccccCCCCceEE
Q 002111          324 FNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANV-----NWEEFPEKVAVQ  398 (965)
Q Consensus       324 fn~gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~-----~l~~lp~kvaih  398 (965)
                      ||.|||.+|+.+++.||+||.||||+|+..+||+||||||||+|+||||||||||+.+.+|.+     +|++||+|||||
T Consensus       258 fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~~~~~~FPdkVAiQ  337 (843)
T KOG2099|consen  258 FNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVRTNFEEFPDKVAIQ  337 (843)
T ss_pred             ccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccccccchhhCcHhheee
Confidence            999999999999999999999999999999999999999999999999999999998877643     599999999999


Q ss_pred             eCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHH
Q 002111          399 MNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVS  478 (965)
Q Consensus       399 lNDtHpalai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~  478 (965)
                      ||||||+||||||||+|||.+||+|++||+||++||||||||+||||||+||++||++|||||+||||+||.+|++.|.+
T Consensus       338 lNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy~In~~~l~~i~~  417 (843)
T KOG2099|consen  338 LNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIYEINQRFLQTVAA  417 (843)
T ss_pred             ccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCchhhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhc
Q 002111          479 EYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAV  558 (965)
Q Consensus       479 ~~~~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  558 (965)
                      +||+     |.|++++|||||                                             |             
T Consensus       418 ~fp~-----D~drlrrmsiie---------------------------------------------e-------------  434 (843)
T KOG2099|consen  418 KFPG-----DVDRLRRMSIIE---------------------------------------------E-------------  434 (843)
T ss_pred             HCCC-----cHHHHhhhhhhh---------------------------------------------c-------------
Confidence            9998     999999999998                                             3             


Q ss_pred             CCCCCeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 002111          559 QEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW  638 (965)
Q Consensus       559 ~~~~~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W  638 (965)
                      .++++++|||+||++|||+|||||+|||+|+|+.+|+||+++||+||+||||||||||||.+|||.|++||+++|| ++|
T Consensus       435 ~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ig-e~~  513 (843)
T KOG2099|consen  435 NSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIG-EEW  513 (843)
T ss_pred             CCccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhh-hHh
Confidence            0245899999999999999999999999999999999999999999999999999999999999999999999999 599


Q ss_pred             ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 002111          639 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK  718 (965)
Q Consensus       639 ~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik  718 (965)
                      ++|+++|.+|++|++|++||++|+++|++||.+|++||++.+|+.+||++|||+|||||||||||+|||||+|+||++||
T Consensus       514 i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK  593 (843)
T KOG2099|consen  514 ITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIK  593 (843)
T ss_pred             hhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 002111          719 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS  798 (965)
Q Consensus       719 ~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nis  798 (965)
                      + +|.   +.++|||+||||||+|+|++||+|||||++||++|||||.|+++|||||||||+||+||+||||||||||||
T Consensus       594 ~-e~~---k~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~IS  669 (843)
T KOG2099|consen  594 E-EPA---KAFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQIS  669 (843)
T ss_pred             h-hhh---hccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhh
Confidence            8 555   448999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhc
Q 002111          799 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKS  876 (965)
Q Consensus       799 tag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~--~~~~~~~~~~l~~v~d~i~~  876 (965)
                      |||+||||||||||||||||+|||||||||||+||+|+||+||||+++++|+.||+++  +...|.++|++++|+++|.+
T Consensus       670 TAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~s  749 (843)
T KOG2099|consen  670 TAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIES  749 (843)
T ss_pred             hccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999999996  33357899999999999999


Q ss_pred             CCCCccc---HHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHH
Q 002111          877 GVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYA  953 (965)
Q Consensus       877 g~f~~~~---f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa  953 (965)
                      |.|++++   |.++.+.|.++      |+|+|++||+||++||++|+++|+||++|++|+|+|||+||+|||||||+|||
T Consensus       750 G~Fsp~~pd~fkd~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa  823 (843)
T KOG2099|consen  750 GFFSPKNPDEFKDIVNMLMYH------DYFLVFADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYA  823 (843)
T ss_pred             CccCCCCchHHHHHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHH
Confidence            9999986   77788888764      99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcccccCCC
Q 002111          954 RDIWNIIPVELP  965 (965)
Q Consensus       954 ~~IW~i~p~~~~  965 (965)
                      ++||+|+|+++|
T Consensus       824 ~eIWnvep~~~~  835 (843)
T KOG2099|consen  824 REIWNVEPSELP  835 (843)
T ss_pred             HHhcCCCcccCC
Confidence            999999999865

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query965
1qm5_A796 Phosphorylase Recognition And Phosphorylysis Of Its 1e-102
1l5v_A796 Crystal Structure Of The Maltodextrin Phosphorylase 1e-102
1xoi_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-102
1fa9_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-102
1em6_A847 Human Liver Glycogen Phosphorylase A Complexed With 1e-102
1z8d_A842 Crystal Structure Of Human Muscle Glycogen Phosphor 1e-102
1fc0_A846 Human Liver Glycogen Phosphorylase Complexed With N 1e-102
2zb2_A849 Human Liver Glycogen Phosphorylase A Complexed With 1e-102
2qll_A847 Human Liver Glycogen Phosphorylase- Gl Complex Leng 1e-102
3dds_A848 Crystal Structure Of Glycogen Phosphorylase Complex 1e-102
3ceh_A809 Human Liver Glycogen Phosphorylase (Tense State) In 1e-101
2ecp_A796 The Crystal Structure Of The E. Coli Maltodextrin P 1e-101
1ahp_A797 Oligosaccharide Substrate Binding In Escherichia Co 1e-101
1pyg_A842 Structural Basis For The Activation Of Glycogen Pho 1e-101
1c8l_A842 Synergistic Inhibition Of Glycogen Phosphorylase A 1e-101
7gpb_A842 Structural Mechanism For Glycogen Phosphorylase Con 1e-101
1abb_A828 Control Of Phosphorylase B Conformation By A Modifi 1e-101
1gpa_A842 Structural Mechanism For Glycogen Phosphorylase Con 1e-101
1c50_A830 Identification And Structural Characterization Of A 1e-101
2gj4_A824 Structure Of Rabbit Muscle Glycogen Phosphorylase I 1e-101
2gm9_A825 Structure Of Rabbit Muscle Glycogen Phosphorylase I 1e-100
2ffr_A825 Crystallographic Studies On N-Azido-Beta-D-Glucopyr 1e-100
1ygp_B879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 1e-100
1ygp_B879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 2e-97
2pyd_A843 The Crystal Structure Of Glycogen Phosphorylase In 1e-100
2g9q_A842 The Crystal Structure Of The Glycogen Phosphorylase 1e-100
3nc4_A841 The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz 1e-100
1z6p_A842 Glycogen Phosphorylase Amp Site Inhibitor Complex L 1e-100
1noi_A842 Complex Of Glycogen Phosphorylase With A Transition 1e-100
4ej2_A825 Crystal Structure Of Gpb In Complex With Dk10 Lengt 1e-100
2c4m_A796 Starch Phosphorylase: Structural Studies Explain Ox 4e-96
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 Back     alignment and structure 
Iteration: 1

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/398 (47%), Positives = 268/398 (67%), Gaps = 14/398 (3%)
Query: 565 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 624
           V MANLCVVG  AVNGVA +HS++V  ++F E+++LWP KF N TNG+TPRRWI+ CNP 
Sbjct: 404 VHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPA 463
Query: 625 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 684
           L+++L   L  E W  +  +L  L KFAD+   + Q+R  K+ NK+++  F+K +TG  +
Sbjct: 464 LAALLDKSLQKE-WANDLDQLINLEKFADDAKFRDQYREIKQANKVRLAEFVKVRTGIEI 522
Query: 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 744
           +P A+FDIQ+KR+HEYKRQ +N+L I+  YK+++E    +R    VPRV +FG KA   Y
Sbjct: 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADR----VPRVFLFGAKAAPGY 578
Query: 745 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 804
             AK I+  I  V   +N+DP +GD LKV+F+PDY VS AE LIPA+++S+ ISTAG EA
Sbjct: 579 YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEA 638
Query: 805 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI-AGLRKERSEGKF-V 862
           SGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG    ++ A L K     K+  
Sbjct: 639 SGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRK 698
Query: 863 PDARFEEVKKFVKSGVFGS---YNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 919
            D   + V K ++SG +     + +D+++ S+ G +G    D +LV  DF +Y+E Q++V
Sbjct: 699 KDKVLDAVLKELESGKYSDGDKHAFDQMLHSI-GKQG---GDPYLVMADFAAYVEAQKQV 754
Query: 920 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 957
           D  Y DQ+ WTR +I+NTA    FSSDR+I++Y   IW
Sbjct: 755 DVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 792
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 Back     alignment and structure
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 Back     alignment and structure
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 Back     alignment and structure
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 Back     alignment and structure
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 Back     alignment and structure
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 Back     alignment and structure
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 Back     alignment and structure
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 Back     alignment and structure
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 Back     alignment and structure
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 Back     alignment and structure
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 Back     alignment and structure
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 Back     alignment and structure
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 Back     alignment and structure
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 Back     alignment and structure
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 Back     alignment and structure
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 Back     alignment and structure
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 Back     alignment and structure
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 Back     alignment and structure
>pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 Back     alignment and structure
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 Back     alignment and structure
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 Back     alignment and structure
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 Back     alignment and structure
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 Back     alignment and structure
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 Back     alignment and structure
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 Back     alignment and structure
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query965
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 0.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 0.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 0.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 0.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 0.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 0.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 0.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query965
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 100.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 100.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 100.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 100.0
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 99.33
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 98.09
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 97.73
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 97.66
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 96.91
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 96.76
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 96.73
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 96.53
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 96.39
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 96.27
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 96.2
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 96.17
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 96.01
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 95.94
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 94.98
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 94.54
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 93.15
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 91.22
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 85.33
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 965
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 0.0
d2gj4a1824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 0.0
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 1e-145
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 1e-131
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query965
d1ygpa_876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 100.0
d2gj4a1824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 100.0
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 100.0
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 98.94
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 98.11
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 96.6
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 96.56
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 94.27
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure